Query 025054
Match_columns 258
No_of_seqs 173 out of 2355
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 09:39:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025054.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025054hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR03649 ergot_EASG ergot alk 100.0 9.5E-31 2.1E-35 215.7 17.9 231 4-257 38-281 (285)
2 PF05368 NmrA: NmrA-like famil 100.0 4.4E-31 9.4E-36 211.5 13.1 188 2-192 40-233 (233)
3 CHL00194 ycf39 Ycf39; Provisio 100.0 1.3E-27 2.8E-32 199.8 16.4 183 4-198 42-235 (317)
4 PLN02657 3,8-divinyl protochlo 99.9 2.2E-23 4.8E-28 178.3 18.1 182 5-198 111-310 (390)
5 PF01073 3Beta_HSD: 3-beta hyd 99.9 8.9E-23 1.9E-27 166.9 16.6 185 8-194 48-279 (280)
6 COG1088 RfbB dTDP-D-glucose 4, 99.9 1.6E-22 3.6E-27 159.3 16.3 183 4-189 50-267 (340)
7 PLN00016 RNA-binding protein; 99.9 6E-21 1.3E-25 163.2 14.1 188 4-196 109-303 (378)
8 COG1087 GalE UDP-glucose 4-epi 99.9 1.5E-20 3.3E-25 149.0 14.1 187 7-195 46-282 (329)
9 PRK15181 Vi polysaccharide bio 99.8 2.3E-20 5E-25 158.0 15.2 179 6-186 70-284 (348)
10 PLN02695 GDP-D-mannose-3',5'-e 99.8 1E-18 2.3E-23 148.9 19.2 184 6-193 65-290 (370)
11 PLN02427 UDP-apiose/xylose syn 99.8 3.7E-19 8E-24 152.7 14.7 179 6-186 66-308 (386)
12 PLN02572 UDP-sulfoquinovose sy 99.8 5.6E-19 1.2E-23 153.5 15.2 185 6-193 114-369 (442)
13 PRK11908 NAD-dependent epimera 99.8 5.5E-18 1.2E-22 143.5 19.1 183 5-189 46-276 (347)
14 KOG2865 NADH:ubiquinone oxidor 99.8 4.7E-19 1E-23 139.0 10.9 178 7-195 111-304 (391)
15 PLN02260 probable rhamnose bio 99.8 1.3E-18 2.7E-23 159.2 15.3 182 5-188 57-273 (668)
16 TIGR01181 dTDP_gluc_dehyt dTDP 99.8 2.8E-18 6E-23 143.3 15.3 179 6-187 51-263 (317)
17 PRK10217 dTDP-glucose 4,6-dehy 99.8 3.2E-18 7E-23 145.4 14.7 180 6-188 52-274 (355)
18 PLN02214 cinnamoyl-CoA reducta 99.8 6.2E-18 1.3E-22 142.8 13.6 174 6-185 61-269 (342)
19 PRK08125 bifunctional UDP-gluc 99.8 1.4E-17 3.1E-22 151.7 15.7 181 5-187 360-588 (660)
20 PRK10675 UDP-galactose-4-epime 99.8 6.9E-17 1.5E-21 136.3 18.6 187 6-194 51-290 (338)
21 KOG1502 Flavonol reductase/cin 99.8 9.8E-18 2.1E-22 136.2 12.7 176 6-186 58-273 (327)
22 PLN02686 cinnamoyl-CoA reducta 99.8 1.9E-17 4.1E-22 141.0 15.2 181 6-191 108-330 (367)
23 PLN02206 UDP-glucuronate decar 99.8 1.8E-17 3.9E-22 143.8 14.8 178 5-192 167-381 (442)
24 PRK10084 dTDP-glucose 4,6 dehy 99.8 2.4E-17 5.3E-22 139.8 15.1 179 6-187 51-280 (352)
25 PLN02166 dTDP-glucose 4,6-dehy 99.8 1.7E-17 3.8E-22 143.6 14.0 178 6-193 169-383 (436)
26 TIGR01472 gmd GDP-mannose 4,6- 99.8 7E-17 1.5E-21 136.6 17.3 181 5-189 55-274 (343)
27 TIGR01214 rmlD dTDP-4-dehydror 99.8 2.1E-17 4.6E-22 136.3 13.6 174 11-189 33-233 (287)
28 PRK07201 short chain dehydroge 99.7 9.6E-17 2.1E-21 146.9 18.4 189 5-196 51-282 (657)
29 PLN02986 cinnamyl-alcohol dehy 99.7 3.4E-17 7.4E-22 137.3 13.7 173 6-185 57-270 (322)
30 PLN02725 GDP-4-keto-6-deoxyman 99.7 2.4E-16 5.2E-21 131.1 18.6 179 10-191 31-256 (306)
31 KOG0747 Putative NAD+-dependen 99.7 2.1E-17 4.5E-22 129.7 11.3 184 4-189 56-272 (331)
32 TIGR01179 galE UDP-glucose-4-e 99.7 3.8E-16 8.3E-21 130.9 19.9 187 6-194 48-285 (328)
33 PLN02240 UDP-glucose 4-epimera 99.7 3E-16 6.4E-21 133.2 19.3 187 6-194 59-299 (352)
34 TIGR03466 HpnA hopanoid-associ 99.7 1.2E-16 2.5E-21 134.2 15.6 186 5-196 43-259 (328)
35 PLN02996 fatty acyl-CoA reduct 99.7 2.7E-16 5.9E-21 138.2 17.7 179 5-186 84-359 (491)
36 PRK09987 dTDP-4-dehydrorhamnos 99.7 1.3E-16 2.9E-21 132.2 14.5 171 11-185 37-235 (299)
37 PRK05865 hypothetical protein; 99.7 9.4E-17 2E-21 147.0 14.5 154 6-183 41-201 (854)
38 PLN02662 cinnamyl-alcohol dehy 99.7 1.2E-16 2.7E-21 133.8 14.0 174 6-186 56-270 (322)
39 PLN02650 dihydroflavonol-4-red 99.7 2.2E-16 4.7E-21 134.0 15.4 176 6-185 57-272 (351)
40 PF13460 NAD_binding_10: NADH( 99.7 1.4E-16 2.9E-21 122.8 12.9 138 4-154 38-183 (183)
41 TIGR02197 heptose_epim ADP-L-g 99.7 1.9E-16 4E-21 132.2 14.0 179 8-191 44-266 (314)
42 PLN00198 anthocyanidin reducta 99.7 2E-16 4.3E-21 133.5 14.2 178 6-186 60-285 (338)
43 PF01370 Epimerase: NAD depend 99.7 1.4E-17 3E-22 133.3 6.6 159 6-165 43-236 (236)
44 COG0451 WcaG Nucleoside-diphos 99.7 1.2E-15 2.5E-20 127.3 16.7 181 6-190 43-262 (314)
45 TIGR03589 PseB UDP-N-acetylglu 99.7 3.8E-16 8.3E-21 130.9 13.7 169 5-185 53-245 (324)
46 PRK11150 rfaD ADP-L-glycero-D- 99.7 1E-15 2.2E-20 127.6 14.3 156 26-186 68-256 (308)
47 COG1091 RfbD dTDP-4-dehydrorha 99.7 1.1E-15 2.4E-20 122.4 13.3 174 12-191 34-233 (281)
48 PLN02653 GDP-mannose 4,6-dehyd 99.7 3.3E-15 7.2E-20 126.2 16.9 178 6-187 61-278 (340)
49 PLN02989 cinnamyl-alcohol dehy 99.7 1.3E-15 2.8E-20 127.9 13.6 175 6-186 57-272 (325)
50 TIGR02622 CDP_4_6_dhtase CDP-g 99.7 1.9E-15 4.2E-20 128.1 14.2 179 6-185 53-277 (349)
51 KOG1430 C-3 sterol dehydrogena 99.7 5.6E-15 1.2E-19 122.5 15.3 189 4-195 54-279 (361)
52 TIGR01746 Thioester-redct thio 99.6 3.1E-15 6.7E-20 127.3 14.2 195 5-204 61-296 (367)
53 PLN02583 cinnamoyl-CoA reducta 99.6 8.7E-15 1.9E-19 121.3 15.7 172 6-186 58-265 (297)
54 PLN02896 cinnamyl-alcohol dehy 99.6 3.8E-14 8.2E-19 120.4 16.9 177 6-186 59-293 (353)
55 PLN00141 Tic62-NAD(P)-related 99.6 4.4E-14 9.6E-19 114.3 15.9 165 5-182 62-250 (251)
56 PF04321 RmlD_sub_bind: RmlD s 99.6 2.1E-15 4.5E-20 124.1 6.8 191 2-197 20-245 (286)
57 TIGR01777 yfcH conserved hypot 99.6 4.4E-14 9.6E-19 116.6 14.1 176 18-199 49-255 (292)
58 COG0702 Predicted nucleoside-d 99.6 1.4E-13 3.1E-18 112.6 16.6 189 5-204 42-238 (275)
59 PLN02778 3,5-epimerase/4-reduc 99.5 1.4E-13 3E-18 114.1 14.1 184 2-195 29-248 (298)
60 PLN03209 translocon at the inn 99.5 1.9E-13 4.1E-18 119.8 14.7 168 6-183 139-323 (576)
61 KOG1371 UDP-glucose 4-epimeras 99.5 1.2E-12 2.5E-17 105.4 16.6 189 4-194 53-293 (343)
62 KOG1429 dTDP-glucose 4-6-dehyd 99.5 7.8E-13 1.7E-17 104.3 13.7 166 22-192 87-289 (350)
63 KOG1431 GDP-L-fucose synthetas 99.5 2.3E-12 5E-17 98.4 13.2 217 11-256 38-301 (315)
64 PF02719 Polysacc_synt_2: Poly 99.4 1.7E-13 3.7E-18 110.6 6.7 168 9-187 58-250 (293)
65 COG1086 Predicted nucleoside-d 99.4 2.5E-12 5.3E-17 110.8 13.3 188 5-203 302-521 (588)
66 PLN02503 fatty acyl-CoA reduct 99.4 2.6E-11 5.5E-16 108.2 18.3 181 5-185 192-473 (605)
67 PRK12320 hypothetical protein; 99.4 5.2E-12 1.1E-16 114.0 13.4 155 5-183 40-202 (699)
68 COG1090 Predicted nucleoside-d 99.4 2.8E-11 6.1E-16 95.5 14.6 174 17-198 46-252 (297)
69 TIGR03443 alpha_am_amid L-amin 99.3 5.8E-11 1.3E-15 117.3 16.2 193 6-203 1035-1279(1389)
70 PLN02260 probable rhamnose bio 99.3 6.1E-11 1.3E-15 108.9 14.0 186 2-198 400-622 (668)
71 COG2910 Putative NADH-flavin r 99.2 5.2E-10 1.1E-14 83.0 12.8 153 5-165 41-210 (211)
72 PF07993 NAD_binding_4: Male s 99.1 5.8E-11 1.3E-15 96.0 5.4 144 4-148 59-249 (249)
73 PRK06482 short chain dehydroge 99.1 1.5E-09 3.2E-14 89.0 12.3 172 6-185 49-263 (276)
74 PRK08263 short chain dehydroge 99.1 1.4E-09 3E-14 89.2 10.3 172 6-183 50-261 (275)
75 PRK12825 fabG 3-ketoacyl-(acyl 99.0 5.3E-09 1.1E-13 84.1 12.3 148 6-166 57-244 (249)
76 PRK05875 short chain dehydroge 99.0 1.2E-08 2.6E-13 83.7 12.6 167 6-185 59-271 (276)
77 PRK13394 3-hydroxybutyrate deh 99.0 7E-09 1.5E-13 84.3 11.0 155 7-166 58-257 (262)
78 TIGR01963 PHB_DH 3-hydroxybuty 99.0 1.2E-08 2.5E-13 82.6 11.7 156 6-166 51-250 (255)
79 PRK12429 3-hydroxybutyrate deh 98.9 1.9E-08 4.1E-13 81.5 12.0 156 6-166 54-253 (258)
80 KOG1203 Predicted dehydrogenas 98.9 2.9E-08 6.2E-13 83.9 12.4 154 4-165 126-301 (411)
81 KOG4288 Predicted oxidoreducta 98.9 9E-09 2E-13 79.2 7.8 159 7-182 98-280 (283)
82 PRK09291 short chain dehydroge 98.9 2.5E-08 5.3E-13 80.8 11.0 100 6-110 52-183 (257)
83 PRK07074 short chain dehydroge 98.9 3.2E-08 6.9E-13 80.2 11.5 164 6-182 50-254 (257)
84 KOG4039 Serine/threonine kinas 98.9 1.6E-08 3.5E-13 74.7 8.5 99 5-110 62-174 (238)
85 PRK06182 short chain dehydroge 98.9 3.4E-08 7.3E-13 80.9 11.4 146 5-155 46-237 (273)
86 PRK12828 short chain dehydroge 98.8 7.8E-08 1.7E-12 76.8 12.6 142 4-166 53-234 (239)
87 PRK07825 short chain dehydroge 98.8 1.2E-07 2.6E-12 77.6 13.7 173 6-201 51-265 (273)
88 PRK07806 short chain dehydroge 98.8 4.1E-08 8.9E-13 79.1 10.8 157 6-168 57-243 (248)
89 PRK08063 enoyl-(acyl carrier p 98.8 5.7E-08 1.2E-12 78.3 11.5 150 6-166 55-244 (250)
90 COG1089 Gmd GDP-D-mannose dehy 98.8 2.2E-07 4.8E-12 74.0 13.6 184 5-196 55-280 (345)
91 PRK12826 3-ketoacyl-(acyl-carr 98.8 8.9E-08 1.9E-12 77.2 11.6 150 6-166 56-245 (251)
92 PRK06138 short chain dehydroge 98.8 1.1E-07 2.4E-12 76.7 11.5 153 6-166 54-247 (252)
93 PRK08219 short chain dehydroge 98.7 2.3E-07 5.1E-12 73.6 11.7 141 6-165 48-221 (227)
94 PRK06914 short chain dehydroge 98.7 1.5E-07 3.3E-12 77.3 10.3 154 6-165 55-252 (280)
95 PRK12746 short chain dehydroge 98.7 3.5E-07 7.5E-12 74.0 12.0 150 6-166 57-250 (254)
96 PRK05653 fabG 3-ketoacyl-(acyl 98.7 1.5E-07 3.3E-12 75.5 9.8 147 7-166 56-242 (246)
97 PRK06180 short chain dehydroge 98.7 3.2E-07 7E-12 75.3 11.7 146 6-156 51-239 (277)
98 PRK06179 short chain dehydroge 98.7 4.2E-07 9.1E-12 74.2 11.8 102 5-111 45-184 (270)
99 KOG1221 Acyl-CoA reductase [Li 98.7 9.9E-07 2.1E-11 75.9 14.3 178 6-185 80-332 (467)
100 PRK07067 sorbitol dehydrogenas 98.6 1.7E-07 3.6E-12 76.0 9.1 161 6-171 53-256 (257)
101 COG3320 Putative dehydrogenase 98.6 2.2E-07 4.9E-12 77.1 9.7 106 3-109 58-201 (382)
102 PRK07231 fabG 3-ketoacyl-(acyl 98.6 4.9E-07 1.1E-11 72.9 11.3 152 6-166 54-246 (251)
103 PRK12829 short chain dehydroge 98.6 4E-07 8.6E-12 74.0 10.4 156 6-166 59-259 (264)
104 PRK08017 oxidoreductase; Provi 98.6 5.9E-07 1.3E-11 72.7 11.2 141 5-156 45-224 (256)
105 PRK07775 short chain dehydroge 98.6 4.3E-07 9.3E-12 74.4 10.4 151 6-164 60-248 (274)
106 PRK05557 fabG 3-ketoacyl-(acyl 98.6 1.1E-06 2.5E-11 70.5 12.2 148 6-166 56-243 (248)
107 PRK05876 short chain dehydroge 98.6 1.8E-06 4E-11 70.8 13.5 167 7-184 57-262 (275)
108 PRK06077 fabG 3-ketoacyl-(acyl 98.6 1.2E-06 2.6E-11 70.7 11.7 152 7-166 58-243 (252)
109 KOG2774 NAD dependent epimeras 98.6 4.9E-07 1.1E-11 70.0 8.7 181 9-192 91-308 (366)
110 PRK07060 short chain dehydroge 98.5 9.4E-07 2E-11 71.0 10.8 151 6-166 54-240 (245)
111 PRK07523 gluconate 5-dehydroge 98.5 9.3E-07 2E-11 71.6 10.7 149 7-166 61-249 (255)
112 PRK05650 short chain dehydroge 98.5 8.5E-07 1.8E-11 72.5 10.5 139 6-155 50-226 (270)
113 PRK07326 short chain dehydroge 98.5 4.1E-06 9E-11 66.9 14.3 139 5-165 54-230 (237)
114 PRK12935 acetoacetyl-CoA reduc 98.5 1.1E-06 2.3E-11 70.8 10.8 148 6-166 57-243 (247)
115 PRK07666 fabG 3-ketoacyl-(acyl 98.5 2.7E-06 5.8E-11 68.1 13.1 130 6-155 57-224 (239)
116 PRK12827 short chain dehydroge 98.5 2.2E-06 4.8E-11 68.9 12.7 146 6-166 60-246 (249)
117 PRK09135 pteridine reductase; 98.5 1.1E-06 2.5E-11 70.6 10.9 154 6-171 58-247 (249)
118 PRK06194 hypothetical protein; 98.5 4.9E-06 1.1E-10 68.5 14.8 157 6-192 56-258 (287)
119 TIGR03206 benzo_BadH 2-hydroxy 98.5 1.5E-06 3.4E-11 69.9 11.2 152 6-166 53-246 (250)
120 PRK12939 short chain dehydroge 98.5 1.9E-06 4.1E-11 69.3 11.4 149 6-166 57-245 (250)
121 PRK10538 malonic semialdehyde 98.5 2.4E-06 5.2E-11 68.9 12.0 139 6-156 47-224 (248)
122 KOG3019 Predicted nucleoside-d 98.5 2.3E-06 5E-11 66.0 10.9 100 93-198 170-271 (315)
123 PRK08324 short chain dehydroge 98.5 1.9E-06 4.2E-11 79.5 12.5 156 6-166 471-673 (681)
124 PRK07577 short chain dehydroge 98.5 3.6E-06 7.8E-11 67.1 11.9 149 7-166 43-230 (234)
125 PRK05565 fabG 3-ketoacyl-(acyl 98.5 3.6E-06 7.8E-11 67.6 11.9 148 6-166 56-243 (247)
126 PRK06128 oxidoreductase; Provi 98.4 5.3E-06 1.2E-10 68.9 12.3 150 7-166 108-295 (300)
127 PRK09186 flagellin modificatio 98.4 2.2E-06 4.8E-11 69.3 9.8 148 6-166 56-252 (256)
128 PRK12745 3-ketoacyl-(acyl-carr 98.4 8E-06 1.7E-10 66.0 13.1 149 6-166 53-249 (256)
129 PRK08220 2,3-dihydroxybenzoate 98.4 4.6E-06 1E-10 67.3 11.6 156 6-166 49-246 (252)
130 PRK12938 acetyacetyl-CoA reduc 98.4 4.6E-06 1E-10 67.1 11.5 147 7-166 55-241 (246)
131 PRK07041 short chain dehydroge 98.4 2.6E-06 5.6E-11 67.8 10.0 153 5-166 45-225 (230)
132 PRK06181 short chain dehydroge 98.4 7.7E-06 1.7E-10 66.5 12.7 138 6-155 51-226 (263)
133 PRK12824 acetoacetyl-CoA reduc 98.4 4.3E-06 9.2E-11 67.1 11.0 148 6-166 53-240 (245)
134 PRK08628 short chain dehydroge 98.4 1.5E-06 3.1E-11 70.5 8.2 162 6-176 56-256 (258)
135 PRK07454 short chain dehydroge 98.3 8.4E-06 1.8E-10 65.3 11.5 132 6-156 56-225 (241)
136 PRK12384 sorbitol-6-phosphate 98.3 6.2E-06 1.3E-10 66.9 10.5 156 6-166 54-254 (259)
137 PRK07774 short chain dehydroge 98.3 9.6E-06 2.1E-10 65.3 11.5 146 6-166 56-244 (250)
138 TIGR01830 3oxo_ACP_reduc 3-oxo 98.3 6.8E-06 1.5E-10 65.6 10.5 147 7-166 50-236 (239)
139 PRK06123 short chain dehydroge 98.3 7.7E-06 1.7E-10 65.8 10.4 150 6-166 53-246 (248)
140 PRK07109 short chain dehydroge 98.3 1.3E-05 2.9E-10 67.6 12.1 141 7-166 59-239 (334)
141 PRK06841 short chain dehydroge 98.3 1.6E-05 3.4E-10 64.3 12.0 149 6-166 62-250 (255)
142 PRK06124 gluconate 5-dehydroge 98.3 1.1E-05 2.3E-10 65.4 10.7 150 6-166 61-250 (256)
143 PRK05993 short chain dehydroge 98.3 4.4E-06 9.5E-11 68.6 8.6 102 4-110 46-186 (277)
144 PRK08213 gluconate 5-dehydroge 98.3 1.6E-05 3.4E-10 64.5 11.7 152 6-166 62-254 (259)
145 PRK12937 short chain dehydroge 98.3 1.6E-05 3.5E-10 63.8 11.4 150 6-166 56-242 (245)
146 PRK12936 3-ketoacyl-(acyl-carr 98.2 2.4E-05 5.1E-10 62.8 12.1 148 6-166 53-240 (245)
147 TIGR01829 AcAcCoA_reduct aceto 98.2 1.4E-05 3.1E-10 63.9 10.8 148 6-166 51-238 (242)
148 PRK07904 short chain dehydroge 98.2 2.4E-05 5.3E-10 63.3 12.2 126 6-155 61-223 (253)
149 COG4221 Short-chain alcohol de 98.2 2.3E-05 4.9E-10 61.7 11.3 140 7-158 55-232 (246)
150 PRK06196 oxidoreductase; Provi 98.2 1.5E-05 3.2E-10 66.7 11.1 145 6-156 72-262 (315)
151 PRK09134 short chain dehydroge 98.2 1.3E-05 2.9E-10 64.9 10.5 153 6-173 60-248 (258)
152 PRK12823 benD 1,6-dihydroxycyc 98.2 3.4E-05 7.4E-10 62.6 12.9 153 7-166 58-256 (260)
153 PRK07890 short chain dehydroge 98.2 1.2E-05 2.5E-10 65.1 9.4 157 6-166 55-253 (258)
154 PRK09730 putative NAD(P)-bindi 98.2 9.9E-06 2.1E-10 65.1 8.7 150 6-166 52-245 (247)
155 PRK07069 short chain dehydroge 98.2 2.3E-05 5E-10 63.1 10.7 150 8-165 54-245 (251)
156 PRK07024 short chain dehydroge 98.2 5E-05 1.1E-09 61.5 12.5 127 6-155 51-216 (257)
157 PRK07097 gluconate 5-dehydroge 98.2 4.1E-05 8.9E-10 62.3 12.0 154 6-166 60-255 (265)
158 PRK08264 short chain dehydroge 98.2 6.7E-05 1.5E-09 59.9 13.0 125 5-155 49-208 (238)
159 PRK12743 oxidoreductase; Provi 98.2 3.3E-05 7.2E-10 62.5 11.3 149 6-166 53-241 (256)
160 PRK06935 2-deoxy-D-gluconate 3 98.2 2.8E-05 6E-10 63.0 10.8 150 6-166 64-253 (258)
161 PRK07814 short chain dehydroge 98.1 4.9E-05 1.1E-09 61.8 12.1 150 6-166 60-249 (263)
162 PLN02253 xanthoxin dehydrogena 98.1 3.8E-05 8.3E-10 63.0 11.5 154 6-166 67-267 (280)
163 PRK06463 fabG 3-ketoacyl-(acyl 98.1 3.1E-05 6.7E-10 62.7 10.8 153 6-166 52-245 (255)
164 PRK06701 short chain dehydroge 98.1 4.8E-05 1E-09 62.9 12.0 149 6-166 97-284 (290)
165 PRK08251 short chain dehydroge 98.1 6.9E-05 1.5E-09 60.3 12.6 127 6-155 54-218 (248)
166 PRK08085 gluconate 5-dehydroge 98.1 4.7E-05 1E-09 61.5 11.5 150 6-166 59-248 (254)
167 PRK12744 short chain dehydroge 98.1 9E-05 2E-09 60.0 12.9 154 6-166 62-252 (257)
168 TIGR01832 kduD 2-deoxy-D-gluco 98.1 5.4E-05 1.2E-09 60.9 11.4 151 6-166 53-243 (248)
169 PRK06398 aldose dehydrogenase; 98.1 8.7E-05 1.9E-09 60.2 12.6 156 6-166 45-242 (258)
170 PRK08643 acetoin reductase; Va 98.1 7E-05 1.5E-09 60.6 11.8 156 6-166 52-251 (256)
171 PRK07856 short chain dehydroge 98.1 5.4E-05 1.2E-09 61.1 10.6 151 6-166 48-237 (252)
172 PRK07102 short chain dehydroge 98.0 0.00011 2.4E-09 59.0 12.1 127 6-155 52-213 (243)
173 PRK06114 short chain dehydroge 98.0 8E-05 1.7E-09 60.2 11.2 151 6-166 59-249 (254)
174 PRK07478 short chain dehydroge 98.0 7.8E-05 1.7E-09 60.2 11.1 151 6-166 56-247 (254)
175 PRK08267 short chain dehydroge 98.0 5.5E-05 1.2E-09 61.4 10.1 135 6-155 49-222 (260)
176 PRK05866 short chain dehydroge 98.0 0.00013 2.9E-09 60.4 12.4 128 7-155 91-258 (293)
177 PRK08642 fabG 3-ketoacyl-(acyl 98.0 0.0001 2.2E-09 59.4 11.3 149 6-166 53-248 (253)
178 PRK06947 glucose-1-dehydrogena 98.0 0.0001 2.2E-09 59.2 10.8 150 6-166 53-246 (248)
179 PRK07063 short chain dehydroge 98.0 7.9E-05 1.7E-09 60.4 10.0 151 6-166 59-252 (260)
180 PRK06198 short chain dehydroge 98.0 0.00012 2.6E-09 59.3 10.8 155 7-166 58-252 (260)
181 TIGR02415 23BDH acetoin reduct 97.9 6.4E-05 1.4E-09 60.6 9.1 153 6-165 50-248 (254)
182 PRK09242 tropinone reductase; 97.9 0.00026 5.6E-09 57.3 12.5 150 6-166 61-250 (257)
183 PRK07985 oxidoreductase; Provi 97.9 0.00022 4.8E-09 59.1 12.1 150 7-166 102-289 (294)
184 PRK12428 3-alpha-hydroxysteroi 97.9 0.00019 4E-09 57.7 11.2 152 8-166 26-228 (241)
185 PRK06172 short chain dehydroge 97.9 0.00014 3E-09 58.7 10.4 151 6-166 57-248 (253)
186 PRK05717 oxidoreductase; Valid 97.9 0.0002 4.4E-09 57.9 11.3 149 6-166 57-245 (255)
187 PRK05786 fabG 3-ketoacyl-(acyl 97.9 0.00019 4.2E-09 57.2 11.1 144 6-166 54-233 (238)
188 PRK08226 short chain dehydroge 97.9 0.00014 3E-09 59.0 10.4 157 6-166 55-251 (263)
189 PRK12747 short chain dehydroge 97.9 0.00023 5.1E-09 57.4 11.6 150 7-166 56-248 (252)
190 PRK07035 short chain dehydroge 97.9 0.00024 5.2E-09 57.3 11.6 149 7-166 59-248 (252)
191 PRK06113 7-alpha-hydroxysteroi 97.9 0.00015 3.2E-09 58.7 10.3 149 6-166 61-248 (255)
192 PRK06139 short chain dehydroge 97.9 0.00033 7.1E-09 59.1 12.6 134 7-156 58-230 (330)
193 PRK08277 D-mannonate oxidoredu 97.9 0.00026 5.7E-09 58.0 11.9 155 6-166 60-270 (278)
194 PRK07832 short chain dehydroge 97.9 0.00017 3.7E-09 58.9 10.6 142 8-155 53-232 (272)
195 PRK08589 short chain dehydroge 97.9 0.00026 5.5E-09 58.0 11.6 154 6-166 55-250 (272)
196 TIGR02632 RhaD_aldol-ADH rhamn 97.9 0.00027 5.8E-09 65.3 12.9 157 6-166 466-668 (676)
197 PRK06057 short chain dehydroge 97.9 0.0002 4.3E-09 58.0 10.7 151 7-166 53-245 (255)
198 PRK05693 short chain dehydroge 97.9 0.00053 1.2E-08 56.1 13.3 102 5-111 44-182 (274)
199 PRK08265 short chain dehydroge 97.8 0.00023 4.9E-09 57.9 10.7 152 6-166 53-242 (261)
200 PRK06550 fabG 3-ketoacyl-(acyl 97.8 0.00035 7.6E-09 55.7 11.6 150 6-166 46-230 (235)
201 PRK12742 oxidoreductase; Provi 97.8 0.00037 8.1E-09 55.5 11.7 148 6-165 52-232 (237)
202 PRK05867 short chain dehydroge 97.8 0.00037 8.1E-09 56.3 11.7 150 6-166 59-248 (253)
203 PRK12748 3-ketoacyl-(acyl-carr 97.8 0.00053 1.1E-08 55.5 12.5 145 6-166 68-252 (256)
204 PRK08217 fabG 3-ketoacyl-(acyl 97.8 0.00033 7.1E-09 56.4 10.9 148 6-166 55-249 (253)
205 PRK12481 2-deoxy-D-gluconate 3 97.8 0.00061 1.3E-08 55.0 12.3 149 6-166 56-246 (251)
206 PRK06949 short chain dehydroge 97.8 0.00058 1.2E-08 55.2 12.1 149 6-165 59-254 (258)
207 PRK05855 short chain dehydroge 97.8 0.00029 6.2E-09 63.9 11.2 101 6-110 365-503 (582)
208 PRK06500 short chain dehydroge 97.8 0.00031 6.8E-09 56.4 10.1 153 7-166 54-244 (249)
209 PRK08416 7-alpha-hydroxysteroi 97.8 0.0003 6.5E-09 57.1 10.0 150 6-166 60-255 (260)
210 PRK07831 short chain dehydroge 97.7 0.00068 1.5E-08 55.0 11.6 150 6-166 70-259 (262)
211 PRK06101 short chain dehydroge 97.7 0.00088 1.9E-08 53.7 12.0 127 6-155 47-206 (240)
212 PRK08936 glucose-1-dehydrogena 97.7 0.00096 2.1E-08 54.1 12.1 150 7-166 59-248 (261)
213 PRK06523 short chain dehydroge 97.7 0.00059 1.3E-08 55.3 10.8 161 6-171 50-258 (260)
214 PRK07201 short chain dehydroge 97.7 0.00056 1.2E-08 63.1 11.9 128 6-155 421-588 (657)
215 COG0300 DltE Short-chain dehyd 97.7 0.00061 1.3E-08 55.0 10.3 132 7-155 58-227 (265)
216 PRK09072 short chain dehydroge 97.6 0.0018 3.8E-08 52.6 12.9 132 6-155 54-222 (263)
217 PRK08278 short chain dehydroge 97.6 0.0019 4.2E-08 52.8 12.6 132 6-155 63-233 (273)
218 PRK08993 2-deoxy-D-gluconate 3 97.6 0.0015 3.3E-08 52.7 11.8 150 7-166 59-248 (253)
219 KOG1372 GDP-mannose 4,6 dehydr 97.6 0.0009 2E-08 52.7 9.5 184 7-196 85-309 (376)
220 PRK07578 short chain dehydroge 97.6 0.002 4.4E-08 50.0 11.6 132 9-163 35-197 (199)
221 TIGR01831 fabG_rel 3-oxoacyl-( 97.5 0.0016 3.5E-08 52.0 10.8 146 6-165 49-235 (239)
222 PRK07576 short chain dehydroge 97.5 0.0013 2.8E-08 53.5 10.2 151 6-166 59-248 (264)
223 smart00822 PKS_KR This enzymat 97.5 0.00069 1.5E-08 51.0 8.0 96 6-106 54-179 (180)
224 PRK08339 short chain dehydroge 97.5 0.0014 3E-08 53.3 10.3 156 6-166 59-256 (263)
225 PRK08261 fabG 3-ketoacyl-(acyl 97.5 0.0016 3.5E-08 57.3 11.2 149 6-166 257-444 (450)
226 PRK06483 dihydromonapterin red 97.4 0.0023 4.9E-08 51.1 10.9 148 5-166 46-231 (236)
227 PRK08945 putative oxoacyl-(acy 97.4 0.0053 1.1E-07 49.3 13.1 129 6-155 63-232 (247)
228 PRK07792 fabG 3-ketoacyl-(acyl 97.4 0.008 1.7E-07 50.1 14.4 145 6-166 63-252 (306)
229 PRK07370 enoyl-(acyl carrier p 97.4 0.0035 7.6E-08 50.8 11.7 147 7-166 61-251 (258)
230 PRK06924 short chain dehydroge 97.4 0.00059 1.3E-08 54.9 7.0 151 6-164 49-247 (251)
231 PRK06484 short chain dehydroge 97.4 0.0019 4.2E-08 57.9 10.9 150 7-166 317-505 (520)
232 PRK06079 enoyl-(acyl carrier p 97.4 0.0021 4.5E-08 51.9 10.1 151 6-166 56-247 (252)
233 PRK07023 short chain dehydroge 97.4 0.001 2.3E-08 53.2 8.1 99 6-109 46-186 (243)
234 PRK09009 C factor cell-cell si 97.4 0.0054 1.2E-07 48.8 12.1 142 5-165 43-229 (235)
235 PRK07453 protochlorophyllide o 97.3 0.002 4.2E-08 54.1 9.9 102 6-107 56-229 (322)
236 PRK07062 short chain dehydroge 97.3 0.0024 5.2E-08 51.9 9.9 156 6-166 60-259 (265)
237 PRK07677 short chain dehydroge 97.3 0.0052 1.1E-07 49.5 11.6 152 6-166 51-243 (252)
238 PRK06197 short chain dehydroge 97.3 0.0025 5.4E-08 53.1 9.8 104 6-110 68-218 (306)
239 PRK05872 short chain dehydroge 97.3 0.0014 3.1E-08 54.3 8.2 138 7-155 59-235 (296)
240 PRK06200 2,3-dihydroxy-2,3-dih 97.2 0.011 2.4E-07 47.9 12.8 154 6-166 53-255 (263)
241 PRK12859 3-ketoacyl-(acyl-carr 97.2 0.0041 8.8E-08 50.3 10.0 143 7-165 70-252 (256)
242 PRK05599 hypothetical protein; 97.2 0.019 4E-07 46.2 13.6 135 7-165 51-223 (246)
243 PRK08594 enoyl-(acyl carrier p 97.2 0.0062 1.3E-07 49.4 10.7 150 6-166 60-251 (257)
244 PRK08703 short chain dehydroge 97.2 0.015 3.4E-07 46.3 12.9 128 7-155 58-228 (239)
245 PRK06940 short chain dehydroge 97.1 0.012 2.6E-07 48.2 12.0 153 7-166 51-261 (275)
246 PRK08177 short chain dehydroge 97.1 0.0072 1.6E-07 47.8 10.0 101 6-109 46-184 (225)
247 PRK06171 sorbitol-6-phosphate 97.0 0.0089 1.9E-07 48.5 10.6 156 6-166 50-261 (266)
248 PRK08690 enoyl-(acyl carrier p 97.0 0.011 2.4E-07 48.0 11.0 149 7-166 58-250 (261)
249 PRK08415 enoyl-(acyl carrier p 97.0 0.0074 1.6E-07 49.5 10.0 146 8-166 58-247 (274)
250 PRK06505 enoyl-(acyl carrier p 97.0 0.018 3.9E-07 47.1 12.1 147 8-166 60-249 (271)
251 PRK07791 short chain dehydroge 97.0 0.017 3.7E-07 47.6 11.8 145 7-166 66-255 (286)
252 PRK06484 short chain dehydroge 97.0 0.013 2.9E-07 52.5 12.0 139 7-154 53-231 (520)
253 PRK07533 enoyl-(acyl carrier p 97.0 0.0092 2E-07 48.4 9.9 148 7-166 62-252 (258)
254 PRK07984 enoyl-(acyl carrier p 96.9 0.012 2.6E-07 47.9 10.2 149 7-166 58-249 (262)
255 PRK06603 enoyl-(acyl carrier p 96.9 0.01 2.3E-07 48.1 9.7 148 8-166 61-250 (260)
256 PRK06125 short chain dehydroge 96.9 0.013 2.9E-07 47.3 10.3 155 6-166 58-251 (259)
257 TIGR02685 pter_reduc_Leis pter 96.8 0.016 3.6E-07 47.1 10.4 83 75-166 169-260 (267)
258 PRK08159 enoyl-(acyl carrier p 96.7 0.017 3.7E-07 47.2 9.9 149 7-166 62-252 (272)
259 PRK06997 enoyl-(acyl carrier p 96.7 0.021 4.5E-07 46.4 10.3 148 8-166 59-249 (260)
260 PRK06953 short chain dehydroge 96.7 0.029 6.2E-07 44.3 10.9 126 5-155 44-204 (222)
261 PRK12367 short chain dehydroge 96.7 0.035 7.6E-07 44.7 11.4 118 8-155 61-212 (245)
262 KOG1610 Corticosteroid 11-beta 96.7 0.022 4.7E-07 46.8 9.8 102 4-111 75-217 (322)
263 PRK08340 glucose-1-dehydrogena 96.6 0.027 5.9E-07 45.5 10.0 155 6-166 49-251 (259)
264 PRK07889 enoyl-(acyl carrier p 96.5 0.025 5.4E-07 45.8 9.4 148 6-166 58-249 (256)
265 PF08659 KR: KR domain; Inter 96.5 0.0046 9.9E-08 47.4 4.6 94 7-105 55-178 (181)
266 PRK07424 bifunctional sterol d 96.4 0.092 2E-06 45.6 12.6 120 6-155 225-372 (406)
267 PRK05884 short chain dehydroge 96.3 0.041 8.8E-07 43.5 9.0 132 6-166 45-216 (223)
268 TIGR01500 sepiapter_red sepiap 96.3 0.028 6E-07 45.4 8.2 142 6-154 56-243 (256)
269 KOG1205 Predicted dehydrogenas 96.2 0.069 1.5E-06 43.7 9.9 133 6-155 64-237 (282)
270 PRK05854 short chain dehydroge 96.1 0.044 9.6E-07 45.8 9.0 103 6-110 66-215 (313)
271 PF03435 Saccharop_dh: Sacchar 96.1 0.023 5E-07 49.0 7.2 52 4-60 45-96 (386)
272 PRK08862 short chain dehydroge 95.9 0.15 3.2E-06 40.5 10.6 95 7-108 56-190 (227)
273 KOG1611 Predicted short chain- 95.7 0.11 2.4E-06 40.7 8.7 104 3-107 52-206 (249)
274 TIGR03325 BphB_TodD cis-2,3-di 95.7 0.15 3.3E-06 41.2 10.3 155 7-166 53-253 (262)
275 PTZ00325 malate dehydrogenase; 95.6 0.016 3.4E-07 48.6 4.2 98 10-109 60-184 (321)
276 PLN02780 ketoreductase/ oxidor 95.6 0.15 3.3E-06 42.8 10.1 126 7-154 106-271 (320)
277 PF08732 HIM1: HIM1; InterPro 95.5 0.029 6.2E-07 47.4 5.2 80 26-111 203-305 (410)
278 PLN00015 protochlorophyllide r 95.3 0.19 4E-06 41.9 9.6 144 6-155 48-264 (308)
279 COG1748 LYS9 Saccharopine dehy 95.3 0.045 9.7E-07 46.8 5.7 50 6-60 48-97 (389)
280 TIGR01289 LPOR light-dependent 95.2 0.28 6.1E-06 41.0 10.5 144 6-155 54-268 (314)
281 PF13561 adh_short_C2: Enoyl-( 95.1 0.084 1.8E-06 42.2 6.7 149 5-166 44-238 (241)
282 TIGR02813 omega_3_PfaA polyket 94.6 0.23 5E-06 52.6 9.8 97 7-108 2096-2223(2582)
283 PF00106 adh_short: short chai 94.5 0.17 3.7E-06 37.6 6.8 83 5-92 52-161 (167)
284 KOG1201 Hydroxysteroid 17-beta 94.4 1.1 2.3E-05 36.9 11.1 127 7-155 88-256 (300)
285 PRK08309 short chain dehydroge 94.1 0.15 3.3E-06 38.8 5.6 51 6-60 48-109 (177)
286 KOG2733 Uncharacterized membra 94.0 0.11 2.3E-06 43.6 4.8 44 9-53 66-109 (423)
287 PRK08303 short chain dehydroge 93.6 0.99 2.2E-05 37.6 10.1 143 7-155 69-254 (305)
288 KOG1210 Predicted 3-ketosphing 92.9 1.4 3E-05 36.5 9.5 136 7-154 86-259 (331)
289 KOG1208 Dehydrogenases with di 92.4 2 4.3E-05 36.0 10.1 107 4-111 85-235 (314)
290 PF02571 CbiJ: Precorrin-6x re 92.4 1.8 3.9E-05 35.0 9.6 90 5-101 43-136 (249)
291 PLN02819 lysine-ketoglutarate 92.2 0.31 6.6E-06 47.2 5.7 45 6-53 628-672 (1042)
292 PLN00106 malate dehydrogenase 92.1 0.27 5.9E-06 41.3 4.7 53 13-66 73-139 (323)
293 TIGR00715 precor6x_red precorr 92.0 0.43 9.3E-06 38.7 5.6 55 5-60 42-98 (256)
294 KOG4169 15-hydroxyprostaglandi 91.8 0.81 1.7E-05 36.2 6.6 150 5-165 55-241 (261)
295 PRK08057 cobalt-precorrin-6x r 91.1 0.8 1.7E-05 36.9 6.3 56 4-60 41-98 (248)
296 PLN02730 enoyl-[acyl-carrier-p 90.6 2 4.3E-05 35.9 8.4 82 78-166 192-284 (303)
297 PRK06300 enoyl-(acyl carrier p 89.8 3.2 7E-05 34.5 9.0 83 78-166 191-283 (299)
298 PF02254 TrkA_N: TrkA-N domain 89.0 1 2.2E-05 31.3 4.9 55 3-59 38-93 (116)
299 COG1028 FabG Dehydrogenases wi 88.4 6.7 0.00014 31.2 9.8 94 6-106 58-190 (251)
300 KOG1200 Mitochondrial/plastidi 87.0 6.2 0.00014 30.6 8.0 147 7-166 64-252 (256)
301 COG2099 CobK Precorrin-6x redu 82.9 3.8 8.2E-05 32.9 5.5 51 9-60 47-99 (257)
302 KOG0725 Reductases with broad 79.5 33 0.00071 28.1 10.8 155 6-166 61-259 (270)
303 PF12683 DUF3798: Protein of u 77.3 14 0.00031 30.0 7.1 53 39-103 116-172 (275)
304 COG0623 FabI Enoyl-[acyl-carri 77.1 9 0.00019 30.5 5.8 147 8-165 59-247 (259)
305 COG2873 MET17 O-acetylhomoseri 76.1 9 0.00019 32.7 5.9 63 2-65 122-188 (426)
306 COG3967 DltE Short-chain dehyd 75.6 29 0.00063 27.3 8.1 33 5-37 50-89 (245)
307 PF10087 DUF2325: Uncharacteri 75.3 14 0.0003 24.9 5.8 56 3-60 20-80 (97)
308 COG2185 Sbm Methylmalonyl-CoA 75.1 12 0.00025 27.4 5.6 57 2-59 36-96 (143)
309 COG0569 TrkA K+ transport syst 74.8 11 0.00023 29.9 6.0 53 5-60 44-98 (225)
310 COG3268 Uncharacterized conser 72.6 5.4 0.00012 33.5 3.8 32 6-37 51-82 (382)
311 PRK08134 O-acetylhomoserine am 71.1 14 0.00029 32.6 6.2 60 3-63 125-188 (433)
312 TIGR03693 ocin_ThiF_like putat 70.2 11 0.00024 34.5 5.4 54 5-60 183-236 (637)
313 PRK05086 malate dehydrogenase; 69.3 8 0.00017 32.4 4.3 42 18-60 61-115 (312)
314 KOG4589 Cell division protein 68.8 11 0.00024 29.0 4.4 48 4-51 108-165 (232)
315 TIGR02990 ectoine_eutA ectoine 67.4 64 0.0014 25.9 11.1 100 43-188 109-209 (239)
316 KOG1209 1-Acyl dihydroxyaceton 66.6 37 0.0008 26.9 6.9 99 4-109 51-189 (289)
317 PF01053 Cys_Met_Meta_PP: Cys/ 65.1 25 0.00054 30.5 6.6 64 2-65 115-182 (386)
318 cd03362 TOPRIM_TopoIA_TopoIII 64.7 13 0.00028 27.4 4.2 46 18-63 90-139 (151)
319 PF14871 GHL6: Hypothetical gl 63.2 19 0.00042 25.9 4.7 44 16-60 1-63 (132)
320 PRK05939 hypothetical protein; 60.5 26 0.00057 30.5 5.9 60 3-63 107-170 (397)
321 PF00389 2-Hacid_dh: D-isomer 60.5 38 0.00082 24.1 5.9 55 6-66 18-72 (133)
322 cd01336 MDH_cytoplasmic_cytoso 60.3 11 0.00024 31.8 3.4 36 17-52 69-117 (325)
323 cd01078 NAD_bind_H4MPT_DH NADP 60.1 12 0.00027 28.6 3.5 30 7-36 78-107 (194)
324 KOG0172 Lysine-ketoglutarate r 59.6 16 0.00034 31.5 4.1 54 5-63 46-100 (445)
325 PRK08114 cystathionine beta-ly 58.9 34 0.00074 29.8 6.3 62 2-63 122-188 (395)
326 COG1255 Uncharacterized protei 58.5 31 0.00068 24.2 4.7 51 5-60 51-101 (129)
327 PRK04148 hypothetical protein; 58.3 26 0.00057 25.3 4.6 32 26-60 77-108 (134)
328 PRK10669 putative cation:proto 58.3 25 0.00054 32.1 5.6 56 3-60 457-513 (558)
329 PF01113 DapB_N: Dihydrodipico 57.8 18 0.0004 25.5 3.8 39 18-60 59-97 (124)
330 cd00704 MDH Malate dehydrogena 57.3 23 0.0005 29.9 4.9 35 18-52 68-115 (323)
331 PRK09496 trkA potassium transp 57.2 37 0.0008 29.9 6.4 52 6-60 276-328 (453)
332 COG2875 CobM Precorrin-4 methy 56.9 89 0.0019 25.0 7.6 47 39-100 61-109 (254)
333 cd01028 TOPRIM_TopoIA TOPRIM_T 56.5 23 0.0005 25.7 4.3 46 18-63 82-130 (142)
334 PRK06702 O-acetylhomoserine am 55.9 40 0.00086 29.8 6.3 61 3-64 122-187 (432)
335 PRK09496 trkA potassium transp 55.8 38 0.00083 29.8 6.3 53 5-60 43-97 (453)
336 PRK03659 glutathione-regulated 55.6 23 0.0005 32.7 5.0 49 3-53 440-489 (601)
337 COG4588 AcfC Accessory coloniz 55.5 29 0.00062 27.1 4.6 48 157-204 18-66 (252)
338 PRK08247 cystathionine gamma-s 55.1 41 0.00089 28.8 6.2 60 3-63 112-175 (366)
339 TIGR01329 cysta_beta_ly_E cyst 55.0 34 0.00074 29.5 5.7 59 4-63 108-170 (378)
340 PRK05968 hypothetical protein; 54.8 37 0.00081 29.4 5.9 59 4-63 125-186 (389)
341 PRK08133 O-succinylhomoserine 54.8 34 0.00075 29.6 5.7 59 4-63 123-185 (390)
342 PRK10537 voltage-gated potassi 54.8 31 0.00066 30.0 5.3 48 4-53 279-327 (393)
343 PF05402 PqqD: Coenzyme PQQ sy 54.1 18 0.00039 22.3 2.9 53 139-206 13-65 (68)
344 PF07021 MetW: Methionine bios 52.4 72 0.0016 24.7 6.4 89 4-96 54-161 (193)
345 KOG1207 Diacetyl reductase/L-x 51.5 43 0.00093 25.6 4.9 148 7-166 55-240 (245)
346 PRK08248 O-acetylhomoserine am 51.0 49 0.0011 29.2 6.1 60 3-63 125-188 (431)
347 PRK07503 methionine gamma-lyas 50.9 49 0.0011 28.8 6.0 60 3-63 126-189 (403)
348 PF08123 DOT1: Histone methyla 50.5 42 0.0009 26.2 5.0 56 5-60 101-156 (205)
349 PRK08223 hypothetical protein; 50.0 56 0.0012 27.1 5.9 55 7-64 99-154 (287)
350 PRK13302 putative L-aspartate 49.9 26 0.00057 28.7 4.0 31 20-53 61-91 (271)
351 PF03686 UPF0146: Uncharacteri 49.7 42 0.00091 24.0 4.4 51 5-60 51-101 (127)
352 COG1234 ElaC Metal-dependent h 49.2 57 0.0012 27.1 5.9 54 7-61 192-255 (292)
353 KOG3923 D-aspartate oxidase [A 48.8 15 0.00032 30.5 2.3 34 2-37 161-194 (342)
354 TIGR01328 met_gam_lyase methio 48.4 63 0.0014 28.0 6.3 59 3-62 120-182 (391)
355 PRK08064 cystathionine beta-ly 48.1 52 0.0011 28.5 5.8 59 4-63 115-177 (390)
356 PF10100 DUF2338: Uncharacteri 47.9 58 0.0013 28.4 5.7 67 23-107 80-148 (429)
357 smart00812 Alpha_L_fucos Alpha 47.8 35 0.00075 29.6 4.6 48 14-62 80-150 (384)
358 PRK05967 cystathionine beta-ly 47.7 75 0.0016 27.7 6.6 60 3-63 125-188 (395)
359 PRK07811 cystathionine gamma-s 47.2 75 0.0016 27.5 6.6 60 3-63 122-185 (388)
360 PRK09028 cystathionine beta-ly 46.8 81 0.0018 27.4 6.7 61 3-64 122-186 (394)
361 PF06415 iPGM_N: BPG-independe 46.5 77 0.0017 25.2 5.9 76 12-95 8-95 (223)
362 PRK07671 cystathionine beta-ly 46.2 70 0.0015 27.6 6.2 61 3-64 110-174 (377)
363 cd02072 Glm_B12_BD B12 binding 45.8 47 0.001 23.8 4.3 52 2-53 23-78 (128)
364 KOG1478 3-keto sterol reductas 45.7 85 0.0018 25.7 6.0 33 5-37 61-100 (341)
365 PRK03562 glutathione-regulated 45.6 40 0.00086 31.3 4.9 50 2-53 439-489 (621)
366 PRK06176 cystathionine gamma-s 45.5 65 0.0014 27.8 6.0 60 3-63 110-173 (380)
367 PRK07810 O-succinylhomoserine 45.3 61 0.0013 28.2 5.8 60 3-63 131-194 (403)
368 PF13483 Lactamase_B_3: Beta-l 45.2 69 0.0015 23.6 5.4 54 6-60 105-161 (163)
369 PRK08249 cystathionine gamma-s 45.1 92 0.002 27.1 6.8 61 3-64 125-189 (398)
370 PRK14851 hypothetical protein; 44.6 83 0.0018 29.7 6.7 51 7-59 115-165 (679)
371 TIGR02649 true_RNase_BN ribonu 44.4 81 0.0018 26.1 6.2 51 9-60 206-266 (303)
372 PRK14852 hypothetical protein; 43.7 89 0.0019 30.7 6.9 50 8-59 405-454 (989)
373 cd00614 CGS_like CGS_like: Cys 43.7 94 0.002 26.6 6.7 59 4-63 102-164 (369)
374 TIGR03855 NAD_NadX aspartate d 43.6 47 0.001 26.4 4.5 26 25-53 36-61 (229)
375 PF01408 GFO_IDH_MocA: Oxidore 43.4 38 0.00083 23.3 3.6 25 26-53 62-86 (120)
376 PRK05994 O-acetylhomoserine am 43.0 69 0.0015 28.2 5.8 58 3-62 124-186 (427)
377 TIGR01501 MthylAspMutase methy 42.7 47 0.001 24.0 3.9 20 43-63 42-61 (134)
378 cd03363 TOPRIM_TopoIA_TopoI TO 42.0 50 0.0011 23.4 4.0 46 18-63 64-111 (123)
379 PRK00048 dihydrodipicolinate r 41.5 46 0.00099 27.0 4.2 38 18-60 52-89 (257)
380 cd05212 NAD_bind_m-THF_DH_Cycl 41.3 23 0.00049 25.8 2.1 36 2-38 48-83 (140)
381 TIGR02651 RNase_Z ribonuclease 41.1 1E+02 0.0022 25.4 6.3 51 9-60 204-264 (299)
382 TIGR01325 O_suc_HS_sulf O-succ 40.9 74 0.0016 27.4 5.6 59 4-63 116-178 (380)
383 PRK08776 cystathionine gamma-s 40.7 83 0.0018 27.4 5.9 58 4-63 122-184 (405)
384 PRK07812 O-acetylhomoserine am 40.3 96 0.0021 27.4 6.2 60 3-63 130-194 (436)
385 TIGR01758 MDH_euk_cyt malate d 40.2 59 0.0013 27.4 4.7 34 19-52 68-114 (324)
386 PF02593 dTMP_synthase: Thymid 39.4 1.9E+02 0.004 23.0 7.0 67 15-98 40-107 (217)
387 PLN02509 cystathionine beta-ly 39.2 91 0.002 27.8 6.0 59 4-63 194-256 (464)
388 PRK14837 undecaprenyl pyrophos 39.2 89 0.0019 25.0 5.3 78 125-209 95-173 (230)
389 cd01080 NAD_bind_m-THF_DH_Cycl 39.2 30 0.00065 26.1 2.6 36 2-38 64-99 (168)
390 PRK06084 O-acetylhomoserine am 38.6 1E+02 0.0022 27.2 6.1 59 4-63 120-182 (425)
391 PF02608 Bmp: Basic membrane p 38.6 87 0.0019 26.0 5.5 41 11-56 168-213 (306)
392 KOG1494 NAD-dependent malate d 38.6 90 0.0019 25.9 5.2 46 13-59 83-141 (345)
393 PF00899 ThiF: ThiF family; I 38.5 1.2E+02 0.0026 21.5 5.6 49 7-60 74-122 (135)
394 PF01120 Alpha_L_fucos: Alpha- 38.0 44 0.00095 28.5 3.7 48 15-63 91-161 (346)
395 PRK12475 thiamine/molybdopteri 37.9 1.2E+02 0.0027 25.7 6.3 49 7-59 98-146 (338)
396 PF01751 Toprim: Toprim domain 37.5 59 0.0013 21.8 3.6 46 17-62 50-99 (100)
397 TIGR00640 acid_CoA_mut_C methy 37.2 75 0.0016 22.8 4.3 18 44-62 44-61 (132)
398 cd02067 B12-binding B12 bindin 37.0 95 0.0021 21.4 4.8 52 2-53 23-78 (119)
399 TIGR03450 mycothiol_INO1 inosi 36.8 1.3E+02 0.0028 25.7 6.0 40 17-57 112-153 (351)
400 TIGR03859 PQQ_PqqD coenzyme PQ 36.5 88 0.0019 20.2 4.2 53 137-205 25-77 (81)
401 TIGR01326 OAH_OAS_sulfhy OAH/O 36.4 97 0.0021 27.1 5.7 59 4-63 119-181 (418)
402 PF04723 GRDA: Glycine reducta 36.4 1.2E+02 0.0025 22.1 4.9 50 9-59 9-70 (150)
403 PRK06720 hypothetical protein; 36.1 56 0.0012 24.5 3.7 58 3-61 37-100 (169)
404 COG0626 MetC Cystathionine bet 35.9 1.5E+02 0.0032 25.9 6.5 61 2-63 123-188 (396)
405 PRK06732 phosphopantothenate-- 35.8 44 0.00094 26.6 3.2 18 19-36 74-91 (229)
406 PF03447 NAD_binding_3: Homose 35.7 84 0.0018 21.6 4.3 36 20-60 51-88 (117)
407 PF02310 B12-binding: B12 bind 35.5 76 0.0016 21.8 4.1 52 2-53 24-79 (121)
408 PRK13304 L-aspartate dehydroge 35.5 66 0.0014 26.2 4.2 31 20-53 55-85 (265)
409 PRK06234 methionine gamma-lyas 35.4 1.5E+02 0.0032 25.8 6.6 60 3-63 125-190 (400)
410 PRK09620 hypothetical protein; 35.3 30 0.00065 27.6 2.1 29 10-38 69-99 (229)
411 COG0075 Serine-pyruvate aminot 34.6 1E+02 0.0022 26.8 5.3 51 15-66 117-175 (383)
412 PRK07504 O-succinylhomoserine 34.3 1.4E+02 0.0029 26.0 6.2 58 4-62 127-188 (398)
413 PRK07688 thiamine/molybdopteri 33.8 1.4E+02 0.003 25.4 6.0 49 7-59 98-146 (339)
414 PRK08861 cystathionine gamma-s 33.7 1.5E+02 0.0032 25.7 6.3 59 4-63 115-177 (388)
415 TIGR01140 L_thr_O3P_dcar L-thr 33.0 1.1E+02 0.0025 25.5 5.5 58 3-63 104-167 (330)
416 PF02882 THF_DHG_CYH_C: Tetrah 32.9 35 0.00075 25.5 2.0 36 2-38 56-91 (160)
417 cd01483 E1_enzyme_family Super 32.8 1.8E+02 0.004 20.7 6.5 49 10-62 74-122 (143)
418 COG3340 PepE Peptidase E [Amin 32.6 89 0.0019 24.7 4.2 47 2-53 58-106 (224)
419 PF03575 Peptidase_S51: Peptid 32.2 87 0.0019 23.0 4.1 36 2-37 9-46 (154)
420 PRK14840 undecaprenyl pyrophos 31.9 1.5E+02 0.0033 24.0 5.6 78 125-209 111-193 (250)
421 PF13380 CoA_binding_2: CoA bi 31.8 1.7E+02 0.0037 20.3 5.3 50 25-96 54-104 (116)
422 TIGR02853 spore_dpaA dipicolin 31.8 86 0.0019 25.9 4.4 19 18-36 201-219 (287)
423 cd00757 ThiF_MoeB_HesA_family 30.9 1.5E+02 0.0032 23.4 5.5 49 7-60 93-141 (228)
424 cd03361 TOPRIM_TopoIA_RevGyr T 30.8 99 0.0021 23.3 4.2 46 18-63 110-158 (170)
425 PRK14192 bifunctional 5,10-met 30.8 44 0.00095 27.6 2.5 34 2-36 179-212 (283)
426 PLN02242 methionine gamma-lyas 30.6 1.8E+02 0.0039 25.5 6.4 57 5-63 140-202 (418)
427 TIGR02355 moeB molybdopterin s 30.5 1.9E+02 0.0041 23.2 6.0 46 16-64 104-149 (240)
428 PRK13656 trans-2-enoyl-CoA red 30.4 72 0.0016 27.8 3.7 11 10-20 108-118 (398)
429 cd02905 Macro_GDAP2_like Macro 30.0 1.2E+02 0.0027 22.0 4.5 39 26-65 68-118 (140)
430 PRK07877 hypothetical protein; 29.9 2.2E+02 0.0048 27.1 7.1 51 7-61 178-228 (722)
431 PF06068 TIP49: TIP49 C-termin 29.4 91 0.002 27.0 4.1 62 136-198 27-88 (398)
432 PF08002 DUF1697: Protein of u 29.3 1.8E+02 0.0038 21.1 5.2 55 170-224 50-110 (137)
433 PRK09426 methylmalonyl-CoA mut 29.3 87 0.0019 29.7 4.4 56 2-58 606-665 (714)
434 COG2879 Uncharacterized small 29.2 33 0.00072 21.0 1.1 20 238-257 32-51 (65)
435 TIGR02356 adenyl_thiF thiazole 29.1 1.4E+02 0.0031 23.0 5.0 41 16-60 101-141 (202)
436 TIGR00642 mmCoA_mut_beta methy 28.9 1.5E+02 0.0033 27.6 5.7 59 2-61 519-581 (619)
437 PLN02358 glyceraldehyde-3-phos 28.6 1.1E+02 0.0024 26.1 4.5 49 11-63 80-128 (338)
438 PRK12548 shikimate 5-dehydroge 28.5 65 0.0014 26.6 3.2 13 3-15 146-159 (289)
439 PRK05613 O-acetylhomoserine am 28.2 1.7E+02 0.0037 25.9 5.8 59 3-62 130-193 (437)
440 TIGR02370 pyl_corrinoid methyl 27.9 1.1E+02 0.0024 23.6 4.2 32 26-62 112-143 (197)
441 PRK07050 cystathionine beta-ly 27.9 2.3E+02 0.005 24.6 6.5 59 4-63 127-189 (394)
442 PF14587 Glyco_hydr_30_2: O-Gl 27.8 2E+02 0.0043 25.0 5.9 20 40-60 104-123 (384)
443 PRK11579 putative oxidoreducta 27.6 1E+02 0.0022 26.1 4.2 19 19-37 55-75 (346)
444 PF13651 EcoRI_methylase: Aden 27.5 1.3E+02 0.0029 25.4 4.6 49 6-60 114-164 (336)
445 PRK08328 hypothetical protein; 27.3 2.7E+02 0.0058 22.1 6.4 48 8-60 101-148 (231)
446 PF02515 CoA_transf_3: CoA-tra 26.7 85 0.0019 24.0 3.3 28 10-37 1-31 (191)
447 PRK15452 putative protease; Pr 26.5 1.8E+02 0.004 25.8 5.7 45 14-59 10-64 (443)
448 cd01747 GATase1_Glutamyl_Hydro 26.5 1.3E+02 0.0027 24.8 4.4 50 3-53 30-87 (273)
449 PF00056 Ldh_1_N: lactate/mala 26.4 1.1E+02 0.0024 22.1 3.8 32 22-53 65-109 (141)
450 PRK13265 glycine/sarcosine/bet 26.2 2.2E+02 0.0047 20.7 4.9 50 9-59 10-71 (154)
451 COG3963 Phospholipid N-methylt 26.2 1.2E+02 0.0025 23.2 3.7 47 5-51 94-144 (194)
452 PRK00055 ribonuclease Z; Revie 25.8 2.4E+02 0.0053 22.5 6.1 52 9-61 170-231 (270)
453 cd01485 E1-1_like Ubiquitin ac 25.8 2.8E+02 0.0062 21.3 6.1 54 8-64 94-148 (198)
454 PRK05434 phosphoglyceromutase; 25.7 2.6E+02 0.0057 25.4 6.5 49 11-60 89-148 (507)
455 PLN02968 Probable N-acetyl-gam 25.7 70 0.0015 27.7 2.9 45 12-62 89-135 (381)
456 TIGR01324 cysta_beta_ly_B cyst 25.2 2.3E+02 0.005 24.4 6.0 58 4-62 112-173 (377)
457 TIGR01305 GMP_reduct_1 guanosi 25.2 2.1E+02 0.0045 24.5 5.4 31 5-35 149-180 (343)
458 COG0673 MviM Predicted dehydro 25.1 1.1E+02 0.0024 25.5 4.1 18 20-37 59-78 (342)
459 PF01118 Semialdhyde_dh: Semia 25.0 1.1E+02 0.0024 21.3 3.4 33 23-60 63-95 (121)
460 PF07745 Glyco_hydro_53: Glyco 24.9 2.7E+02 0.0058 23.7 6.1 100 3-104 13-133 (332)
461 cd00475 CIS_IPPS Cis (Z)-Isopr 24.8 1.6E+02 0.0034 23.4 4.5 78 125-209 89-171 (221)
462 PF02629 CoA_binding: CoA bind 24.7 1.8E+02 0.0038 19.3 4.3 40 16-60 53-92 (96)
463 PRK07878 molybdopterin biosynt 24.6 1.9E+02 0.0041 25.2 5.4 48 8-60 115-162 (392)
464 PRK14834 undecaprenyl pyrophos 24.6 2.4E+02 0.0053 22.8 5.6 67 141-209 114-185 (249)
465 PRK00436 argC N-acetyl-gamma-g 24.5 1.2E+02 0.0027 25.7 4.2 33 23-60 65-97 (343)
466 PF13727 CoA_binding_3: CoA-bi 24.4 1.2E+02 0.0026 22.2 3.8 31 26-57 141-171 (175)
467 KOG1321 Protoheme ferro-lyase 24.3 1.9E+02 0.0042 24.4 5.0 53 40-101 140-197 (395)
468 COG1224 TIP49 DNA helicase TIP 24.2 1.5E+02 0.0032 25.7 4.4 71 125-198 33-103 (450)
469 PF03786 UxuA: D-mannonate deh 24.2 3.1E+02 0.0067 23.5 6.3 159 15-204 12-186 (351)
470 PRK08644 thiamine biosynthesis 24.2 2.8E+02 0.006 21.7 5.9 50 9-62 101-151 (212)
471 cd02907 Macro_Af1521_BAL_like 24.2 3.1E+02 0.0067 20.5 7.4 41 26-67 73-125 (175)
472 KOG1099 SAM-dependent methyltr 24.2 1.9E+02 0.0041 23.3 4.7 33 5-37 89-126 (294)
473 cd01487 E1_ThiF_like E1_ThiF_l 24.1 3E+02 0.0065 20.7 5.9 47 9-59 72-119 (174)
474 PRK14106 murD UDP-N-acetylmura 23.8 1.1E+02 0.0025 26.8 4.0 29 25-57 67-95 (450)
475 COG0293 FtsJ 23S rRNA methylas 23.7 90 0.0019 24.4 2.9 32 5-36 85-121 (205)
476 PRK08955 glyceraldehyde-3-phos 23.6 1.2E+02 0.0027 25.7 3.9 37 24-64 86-122 (334)
477 TIGR01057 topA_arch DNA topois 23.6 1.4E+02 0.003 27.9 4.6 46 18-63 85-132 (618)
478 TIGR03853 matur_matur probable 23.5 2.2E+02 0.0047 18.4 4.8 38 168-205 15-57 (77)
479 cd02904 Macro_H2A_like Macro d 23.3 2E+02 0.0043 22.2 4.7 39 26-65 91-138 (186)
480 PRK07574 formate dehydrogenase 23.2 88 0.0019 27.2 3.1 49 2-52 211-272 (385)
481 COG2403 Predicted GTPase [Gene 23.2 5.1E+02 0.011 22.7 7.9 101 3-108 59-169 (449)
482 cd01338 MDH_choloroplast_like 23.2 1.4E+02 0.003 25.2 4.2 87 21-109 73-185 (322)
483 COG1139 Uncharacterized conser 23.1 2.6E+02 0.0057 24.7 5.7 46 139-189 130-175 (459)
484 PRK13303 L-aspartate dehydroge 23.0 1.5E+02 0.0033 24.1 4.3 13 25-37 60-72 (265)
485 PRK00431 RNase III inhibitor; 22.9 3.3E+02 0.0072 20.4 7.0 39 27-66 75-124 (177)
486 PF14488 DUF4434: Domain of un 22.8 2.7E+02 0.0058 20.9 5.3 58 40-98 20-82 (166)
487 PRK14829 undecaprenyl pyrophos 22.8 2.8E+02 0.006 22.4 5.6 65 143-209 116-185 (243)
488 PRK15469 ghrA bifunctional gly 22.7 1.2E+02 0.0026 25.4 3.7 31 17-49 181-211 (312)
489 PRK11199 tyrA bifunctional cho 22.6 80 0.0017 27.2 2.7 36 2-37 118-153 (374)
490 PRK06767 methionine gamma-lyas 22.6 2.9E+02 0.0063 23.8 6.2 58 5-63 124-185 (386)
491 COG3640 CooC CO dehydrogenase 22.5 1.2E+02 0.0027 24.4 3.5 37 23-60 152-190 (255)
492 PRK02079 pyrroloquinoline quin 22.4 2.2E+02 0.0047 18.9 4.2 35 137-186 30-64 (88)
493 COG1167 ARO8 Transcriptional r 22.4 1.7E+02 0.0037 26.0 4.8 52 2-53 196-260 (459)
494 PF06506 PrpR_N: Propionate ca 22.2 1.9E+02 0.0041 21.8 4.4 41 16-60 91-131 (176)
495 PRK09875 putative hydrolase; P 22.0 3.5E+02 0.0075 22.5 6.2 74 26-105 47-123 (292)
496 PRK14831 undecaprenyl pyrophos 21.7 3.1E+02 0.0068 22.2 5.7 66 142-209 121-191 (249)
497 cd02908 Macro_Appr_pase_like M 21.6 3.4E+02 0.0074 20.1 7.0 40 26-66 67-117 (165)
498 COG0696 GpmI Phosphoglyceromut 21.6 3.1E+02 0.0067 24.7 5.9 50 10-60 87-147 (509)
499 PRK05776 DNA topoisomerase I; 21.6 1.4E+02 0.003 28.1 4.2 47 17-63 87-135 (670)
500 PRK07561 DNA topoisomerase I s 21.5 1.4E+02 0.003 29.1 4.3 47 17-63 77-126 (859)
No 1
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.97 E-value=9.5e-31 Score=215.65 Aligned_cols=231 Identities=13% Similarity=0.207 Sum_probs=178.2
Q ss_pred cCceeEEeccCCCHHHHHHhh------CC-CcEEEEccCccc--hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCC
Q 025054 4 MINCLIAQGDLHDHESLVKAI------KP-VDVVISAVGRTE--VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPI 73 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al------~g-~d~Vi~~~~~~~--~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~ 73 (258)
..+++.+.+|++|+++|.+++ +| +|+||++.+... ....+++++||+++| |||||+ |+.+....
T Consensus 38 ~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~~~~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~----- 111 (285)
T TIGR03649 38 GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIPDLAPPMIKFIDFARSKG-VRRFVLLSASIIEKG----- 111 (285)
T ss_pred CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCCChhHHHHHHHHHHHHcC-CCEEEEeeccccCCC-----
Confidence 357788999999999999999 67 999999887532 567889999999999 999999 76554321
Q ss_pred CCCccchhhHHHHHHHHHhC-CCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHh
Q 025054 74 EPAKSGYARKAKIRRAIEAE-GIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAV 152 (258)
Q Consensus 74 ~~~~~~~~~k~~~e~~l~~~-~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l 152 (258)
...+..+++++++. +++||+|||++||+++...+.... ....+.+ +.+.|+.++++|+++|+|++++.++
T Consensus 112 ------~~~~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~~~~~~--~~~~~~~-~~~~g~~~~~~v~~~Dva~~~~~~l 182 (285)
T TIGR03649 112 ------GPAMGQVHAHLDSLGGVEYTVLRPTWFMENFSEEFHVEA--IRKENKI-YSATGDGKIPFVSADDIARVAYRAL 182 (285)
T ss_pred ------CchHHHHHHHHHhccCCCEEEEeccHHhhhhcccccccc--cccCCeE-EecCCCCccCcccHHHHHHHHHHHh
Confidence 11345678899885 999999999999998743211111 1122233 3456788999999999999999999
Q ss_pred cCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHhccCcchhh--heeeeeEEEecCCccccC
Q 025054 153 DDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDASNEDKIM--LVVNFSIFMKGEQTNFEI 230 (258)
Q Consensus 153 ~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~G~~~~~~~ 230 (258)
.++...++.|+++|| +.+|++|+++.+++++|+++++..+|.+++.+.+...++|.+.. +..++.....|.... .
T Consensus 183 ~~~~~~~~~~~l~g~-~~~s~~eia~~l~~~~g~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~--~ 259 (285)
T TIGR03649 183 TDKVAPNTDYVVLGP-ELLTYDDVAEILSRVLGRKITHVKLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAEVR--L 259 (285)
T ss_pred cCCCcCCCeEEeeCC-ccCCHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcccc--c
Confidence 987667889999986 59999999999999999999999999999999998888988764 233333445555321 1
Q ss_pred CCCCcccccccCCCCcccCHHHHHhhh
Q 025054 231 DPSSGVEASELYPDVDYATVEEYLDQF 257 (258)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~s~ee~l~~~ 257 (258)
. .+. +.+.|.+|+||+||++++
T Consensus 260 ~----~~~-~~~~G~~p~~~~~~~~~~ 281 (285)
T TIGR03649 260 N----DVV-KAVTGSKPRGFRDFAESN 281 (285)
T ss_pred c----chH-HHHhCcCCccHHHHHHHh
Confidence 1 223 444699999999999975
No 2
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.97 E-value=4.4e-31 Score=211.46 Aligned_cols=188 Identities=28% Similarity=0.447 Sum_probs=151.9
Q ss_pred cccCceeEEeccCCCHHHHHHhhCCCcEEEEccCc---cchhchHHHHHHHHHhCCccEEEcCCCCCCCCCCCCCCCCcc
Q 025054 2 LYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGR---TEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGHPIEPAKS 78 (258)
Q Consensus 2 l~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~---~~~~~~~~li~aa~~~g~vk~~v~S~~~~~~~~~~~~~~~~~ 78 (258)
|+..|++++.+|++|+++|.++|+|+|+||++.+. .....++++++||+++| |||||+|+++..........|..+
T Consensus 40 l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~~~~~~~~p~~~ 118 (233)
T PF05368_consen 40 LQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSELEQQKNLIDAAKAAG-VKHFVPSSFGADYDESSGSEPEIP 118 (233)
T ss_dssp HHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCHHHHHHHHHHHHHHHT--SEEEESEESSGTTTTTTSTTHHH
T ss_pred hhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhhhhhhhhhHHHhhhccc-cceEEEEEecccccccccccccch
Confidence 45689999999999999999999999999999984 34889999999999999 999999998876643322334567
Q ss_pred chhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeee-ccchHHHHHHHHhcCCCC
Q 025054 79 GYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFN-KEEDIATYTIKAVDDPRT 157 (258)
Q Consensus 79 ~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v-~~~D~a~~~~~~l~~~~~ 157 (258)
+++.|..+|++|++++++||+||||+||++++..+............+.++++++.+..++ +.+|+|++++.++.+|..
T Consensus 119 ~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~ 198 (233)
T PF05368_consen 119 HFDQKAEIEEYLRESGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEK 198 (233)
T ss_dssp HHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGG
T ss_pred hhhhhhhhhhhhhhccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHH
Confidence 8899999999999999999999999999998764432111111223578888888777775 999999999999999854
Q ss_pred --CCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEe
Q 025054 158 --LNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIY 192 (258)
Q Consensus 158 --~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~ 192 (258)
.|+.+.++| +.+|++|+++++++.+|++++|.+
T Consensus 199 ~~~~~~~~~~~--~~~t~~eia~~~s~~~G~~v~y~~ 233 (233)
T PF05368_consen 199 HNNGKTIFLAG--ETLTYNEIAAILSKVLGKKVKYVQ 233 (233)
T ss_dssp TTEEEEEEEGG--GEEEHHHHHHHHHHHHTSEEEEEE
T ss_pred hcCCEEEEeCC--CCCCHHHHHHHHHHHHCCccEEeC
Confidence 478888874 699999999999999999998864
No 3
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.95 E-value=1.3e-27 Score=199.76 Aligned_cols=183 Identities=23% Similarity=0.274 Sum_probs=149.1
Q ss_pred cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCC
Q 025054 4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHP 72 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~ 72 (258)
..|++++.+|++|++++.++++|+|+|||+++... +.++.++++||+++| |+|||+ |+++....
T Consensus 42 ~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~~~---- 116 (317)
T CHL00194 42 EWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAEQY---- 116 (317)
T ss_pred hcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCccchhhhhHHHHHHHHHHHHHcC-CCEEEEecccccccc----
Confidence 45899999999999999999999999999876421 456789999999999 999999 87765321
Q ss_pred CCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHh
Q 025054 73 IEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAV 152 (258)
Q Consensus 73 ~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l 152 (258)
+..+|..+|..+|+++++++++||++||+.+|+++...+..+. .......+ +++++++++|+++|+|++++.++
T Consensus 117 --~~~~~~~~K~~~e~~l~~~~l~~tilRp~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l 190 (317)
T CHL00194 117 --PYIPLMKLKSDIEQKLKKSGIPYTIFRLAGFFQGLISQYAIPI---LEKQPIWI-TNESTPISYIDTQDAAKFCLKSL 190 (317)
T ss_pred --CCChHHHHHHHHHHHHHHcCCCeEEEeecHHhhhhhhhhhhhh---ccCCceEe-cCCCCccCccCHHHHHHHHHHHh
Confidence 2356788999999999999999999999999987543321111 12223333 44577889999999999999999
Q ss_pred cCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHH
Q 025054 153 DDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQI 198 (258)
Q Consensus 153 ~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 198 (258)
.++...+++|+++|+ +.+|++|+++.+.+.+|++..+..+|....
T Consensus 191 ~~~~~~~~~~ni~g~-~~~s~~el~~~~~~~~g~~~~~~~vp~~~~ 235 (317)
T CHL00194 191 SLPETKNKTFPLVGP-KSWNSSEIISLCEQLSGQKAKISRVPLFLL 235 (317)
T ss_pred cCccccCcEEEecCC-CccCHHHHHHHHHHHhCCCCeEEeCCHHHH
Confidence 887668999999986 599999999999999999999998887544
No 4
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.91 E-value=2.2e-23 Score=178.32 Aligned_cols=182 Identities=23% Similarity=0.242 Sum_probs=148.0
Q ss_pred CceeEEeccCCCHHHHHHhhC----CCcEEEEccCccc----------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCC
Q 025054 5 INCLIAQGDLHDHESLVKAIK----PVDVVISAVGRTE----------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDA 69 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~----g~d~Vi~~~~~~~----------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~ 69 (258)
.+++++.+|++|++++.++++ ++|+|||+++... .....+++++|++.| ++|||+ |+.+...
T Consensus 111 ~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~~-- 187 (390)
T PLN02657 111 PGAEVVFGDVTDADSLRKVLFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQK-- 187 (390)
T ss_pred CCceEEEeeCCCHHHHHHHHHHhCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcC-CCEEEEEeeccccC--
Confidence 478999999999999999998 5999999876421 466789999999999 999998 7765431
Q ss_pred CCCCCCCccchhhHHHHHHHHHh--CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCcee-eeeccchHHH
Q 025054 70 GHPIEPAKSGYARKAKIRRAIEA--EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKA-IFNKEEDIAT 146 (258)
Q Consensus 70 ~~~~~~~~~~~~~k~~~e~~l~~--~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~-~~v~~~D~a~ 146 (258)
+..+|..+|..+|+++++ ++++||++||+.||+++...+.. ...++.+.++|+|+..+ .+|+++|+|+
T Consensus 188 -----p~~~~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~~~~~~~----~~~g~~~~~~GdG~~~~~~~I~v~DlA~ 258 (390)
T PLN02657 188 -----PLLEFQRAKLKFEAELQALDSDFTYSIVRPTAFFKSLGGQVEI----VKDGGPYVMFGDGKLCACKPISEADLAS 258 (390)
T ss_pred -----cchHHHHHHHHHHHHHHhccCCCCEEEEccHHHhcccHHHHHh----hccCCceEEecCCcccccCceeHHHHHH
Confidence 344677899999999986 89999999999999865332111 12334566778887654 5799999999
Q ss_pred HHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHH
Q 025054 147 YTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQI 198 (258)
Q Consensus 147 ~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 198 (258)
+++.++.++...+++|+++||++.+|++|+++.+.+.+|+++++..+|...+
T Consensus 259 ~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~~~ 310 (390)
T PLN02657 259 FIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQIM 310 (390)
T ss_pred HHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHHHH
Confidence 9999998776678999999876689999999999999999999999987644
No 5
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.90 E-value=8.9e-23 Score=166.92 Aligned_cols=185 Identities=21% Similarity=0.258 Sum_probs=139.3
Q ss_pred eEEeccCCCHHHHHHhhCCCcEEEEccCccc--------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCC----
Q 025054 8 LIAQGDLHDHESLVKAIKPVDVVISAVGRTE--------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVD---- 68 (258)
Q Consensus 8 ~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~---- 68 (258)
+++++|++|.+++.++++|+|+|||+++... +.+++++++||++++ |||+|+ |+..+...
T Consensus 48 ~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~ 126 (280)
T PF01073_consen 48 EYIQGDITDPESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKG 126 (280)
T ss_pred eEEEeccccHHHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCC
Confidence 3899999999999999999999999987421 789999999999999 999999 76543111
Q ss_pred -------CCCC--CCCCccchhhHHHHHHHHHh-CC--------CCeEEEecCcccccCcCCCCCCCCCCCCCC-ceEec
Q 025054 69 -------AGHP--IEPAKSGYARKAKIRRAIEA-EG--------IPHTYVSCNCSFGFFLPTMAQPGATAPPRE-NILFY 129 (258)
Q Consensus 69 -------~~~~--~~~~~~~~~~k~~~e~~l~~-~~--------~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 129 (258)
+..+ ..+...|..+|+.+|+++.+ .+ +.+++|||+.+||+....+..........+ .....
T Consensus 127 ~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~ 206 (280)
T PF01073_consen 127 DPIINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQI 206 (280)
T ss_pred CCcccCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceee
Confidence 1111 11334667799999999876 22 889999999999976543321111111122 45667
Q ss_pred cCCCceeeeeccchHHHHHHHHhc---CC----CCCCceEEEcCCCCccC-HHHHHHHHHHHhCCccee-EecC
Q 025054 130 GDGQPKAIFNKEEDIATYTIKAVD---DP----RTLNKTLYLRPPKNIYS-FKELVALWEKKIGKTLEK-IYVT 194 (258)
Q Consensus 130 g~g~~~~~~v~~~D~a~~~~~~l~---~~----~~~~~~~~l~g~~~~~t-~~e~~~~~~~~~g~~~~~-~~~~ 194 (258)
|+++...++++++|+|.+.+.+.+ ++ ...|+.|+++. +++++ +.|+...+.+.+|.+.+. +.+|
T Consensus 207 g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd-~~p~~~~~~f~~~~~~~~G~~~~~~~~lp 279 (280)
T PF01073_consen 207 GDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITD-GEPVPSFWDFMRPLWEALGYPPPKSISLP 279 (280)
T ss_pred cCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEEC-CCccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence 888889999999999999987653 22 35689999997 56888 999999999999987665 5554
No 6
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.90 E-value=1.6e-22 Score=159.34 Aligned_cols=183 Identities=22% Similarity=0.252 Sum_probs=150.9
Q ss_pred cCceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCcc-EEEc-CC--
Q 025054 4 MINCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIK-RFFP-TE-- 62 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk-~~v~-S~-- 62 (258)
+++.+++++|+.|.+.+.+.|+ ..|+|+|+++-+. +-++.+|++||++.. .+ ||++ |+
T Consensus 50 ~~~~~fv~~DI~D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~-~~frf~HISTDE 128 (340)
T COG1088 50 SPRYRFVQGDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYW-GKFRFHHISTDE 128 (340)
T ss_pred CCCceEEeccccCHHHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhc-ccceEEEecccc
Confidence 3678999999999999999999 5899999998542 678999999999988 54 8998 74
Q ss_pred -CCCC------CCCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC--CC-CCCCCCCCCCceEe
Q 025054 63 -YGSN------VDAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT--MA-QPGATAPPRENILF 128 (258)
Q Consensus 63 -~~~~------~~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~--~~-~~~~~~~~~~~~~~ 128 (258)
||.- .++.++..|.+||.+||+.....+++ .|++.++.||+.-||++.-. +. ......+.+.++++
T Consensus 129 VYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpv 208 (340)
T COG1088 129 VYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPV 208 (340)
T ss_pred ccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCce
Confidence 4432 22456788999999999999888876 79999999999999975321 10 00001245668999
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcce
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLE 189 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~ 189 (258)
+|+|.+.++|++++|-++++-.++...+ .|++|||+| +++.+-.|+++.+++.+|+..+
T Consensus 209 YGdG~~iRDWl~VeDh~~ai~~Vl~kg~-~GE~YNIgg-~~E~~Nlevv~~i~~~l~~~~~ 267 (340)
T COG1088 209 YGDGLQIRDWLYVEDHCRAIDLVLTKGK-IGETYNIGG-GNERTNLEVVKTICELLGKDKP 267 (340)
T ss_pred ecCCcceeeeEEeHhHHHHHHHHHhcCc-CCceEEeCC-CccchHHHHHHHHHHHhCcccc
Confidence 9999999999999999999999999875 699999998 6799999999999999998665
No 7
>PLN00016 RNA-binding protein; Provisional
Probab=99.86 E-value=6e-21 Score=163.24 Aligned_cols=188 Identities=16% Similarity=0.143 Sum_probs=138.5
Q ss_pred cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc-CCCCCCCCC----CCCCCCCcc
Q 025054 4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDA----GHPIEPAKS 78 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~----~~~~~~~~~ 78 (258)
..|++++.+|+.|.+.+. +..++|+|||+.+. ....++++++||+++| |+|||+ |+.+..... .....+..+
T Consensus 109 ~~~v~~v~~D~~d~~~~~-~~~~~d~Vi~~~~~-~~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg~~~~~p~~E~~~~~p 185 (378)
T PLN00016 109 SAGVKTVWGDPADVKSKV-AGAGFDVVYDNNGK-DLDEVEPVADWAKSPG-LKQFLFCSSAGVYKKSDEPPHVEGDAVKP 185 (378)
T ss_pred hcCceEEEecHHHHHhhh-ccCCccEEEeCCCC-CHHHHHHHHHHHHHcC-CCEEEEEccHhhcCCCCCCCCCCCCcCCC
Confidence 347899999998744333 23589999999764 3667899999999999 999998 765442111 000011112
Q ss_pred chhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCC-C-CCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054 79 GYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMA-Q-PGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR 156 (258)
Q Consensus 79 ~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~ 156 (258)
. .+|..+|+++++.+++||++||+.+||+...... . +.......+.+.++|+|++.++++|++|+|++++.++.++.
T Consensus 186 ~-~sK~~~E~~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~ 264 (378)
T PLN00016 186 K-AGHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPK 264 (378)
T ss_pred c-chHHHHHHHHHHcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCcc
Confidence 2 2799999999999999999999999997532100 0 00001223456778888999999999999999999998876
Q ss_pred CCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHH
Q 025054 157 TLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTED 196 (258)
Q Consensus 157 ~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~ 196 (258)
..+++|+++++ +.+|++|+++.+.+.+|.+.++...+.+
T Consensus 265 ~~~~~yni~~~-~~~s~~el~~~i~~~~g~~~~i~~~~~~ 303 (378)
T PLN00016 265 AAGQIFNIVSD-RAVTFDGMAKACAKAAGFPEEIVHYDPK 303 (378)
T ss_pred ccCCEEEecCC-CccCHHHHHHHHHHHhCCCCceeecCcc
Confidence 57899999984 5899999999999999998776665543
No 8
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.85 E-value=1.5e-20 Score=148.96 Aligned_cols=187 Identities=20% Similarity=0.266 Sum_probs=142.3
Q ss_pred eeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEcCCC----CC
Q 025054 7 CLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFPTEY----GS 65 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~S~~----~~ 65 (258)
++++++|+.|.+.|.+.|+ ..|+|||+++... +.++.+|+++|+++| |++||+||. |.
T Consensus 46 ~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~ 124 (329)
T COG1087 46 FKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGE 124 (329)
T ss_pred CceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCC
Confidence 5899999999999999997 6899999998642 788999999999999 999999553 33
Q ss_pred CC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC-CCCC--CC---------CCCC-CC
Q 025054 66 NV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT-MAQP--GA---------TAPP-RE 124 (258)
Q Consensus 66 ~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~-~~~~--~~---------~~~~-~~ 124 (258)
.. .+..+..|.+||..+|..+|++|+. .+++++++|-....|.-.+. +... +. .++. ..
T Consensus 125 p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~ 204 (329)
T COG1087 125 PTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRD 204 (329)
T ss_pred CCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCc
Confidence 21 2233455789999999999999975 68999999976666632111 0000 00 0112 23
Q ss_pred ceEecc------CCCceeeeeccchHHHHHHHHhcCCCCC--CceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCH
Q 025054 125 NILFYG------DGQPKAIFNKEEDIATYTIKAVDDPRTL--NKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTE 195 (258)
Q Consensus 125 ~~~~~g------~g~~~~~~v~~~D~a~~~~~~l~~~~~~--~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~ 195 (258)
++.++| ||+-.+++||+.|+|++.+.+++.-... ..+||++. +.-+|..|+++.+.+++|++++++-.+-
T Consensus 205 ~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~-G~G~SV~evi~a~~~vtg~~ip~~~~~R 282 (329)
T COG1087 205 KLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGS-GNGFSVLEVIEAAKKVTGRDIPVEIAPR 282 (329)
T ss_pred eeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHhCCceeEEEccC-CCceeHHHHHHHHHHHhCCcCceeeCCC
Confidence 466666 4777899999999999999998764222 25788875 7899999999999999999998877653
No 9
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.85 E-value=2.3e-20 Score=158.01 Aligned_cols=179 Identities=17% Similarity=0.166 Sum_probs=136.9
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CCCC
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGSN 66 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~~ 66 (258)
+++++.+|+.|.+.+.++++++|+|||+++... +.++.+++++|++.| +++||+ |+ ||..
T Consensus 70 ~~~~~~~Di~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~ 148 (348)
T PRK15181 70 RFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDH 148 (348)
T ss_pred ceEEEEccCCCHHHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCC
Confidence 467899999999999999999999999997421 577899999999999 999998 64 3422
Q ss_pred CC----CCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCC-----C--CCCCCCCceEeccC
Q 025054 67 VD----AGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQP-----G--ATAPPRENILFYGD 131 (258)
Q Consensus 67 ~~----~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~g~ 131 (258)
.+ +.....|..+|..+|..+|.+++. .+++++++||+.+||+........ . .....++.+.++|+
T Consensus 149 ~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~ 228 (348)
T PRK15181 149 PDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGD 228 (348)
T ss_pred CCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCC
Confidence 11 111223556788899999988754 589999999999999754211000 0 01123446778899
Q ss_pred CCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054 132 GQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSFKELVALWEKKIGK 186 (258)
Q Consensus 132 g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~ 186 (258)
|+++++|+|++|+++++..++..+. ..+++||+++ ++.+|++|+++.+.+.++.
T Consensus 229 g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~-g~~~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 229 GSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAV-GDRTSLNELYYLIRDGLNL 284 (348)
T ss_pred CCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecC-CCcEeHHHHHHHHHHHhCc
Confidence 9999999999999999988775432 3578999986 5699999999999999874
No 10
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.82 E-value=1e-18 Score=148.88 Aligned_cols=184 Identities=18% Similarity=0.220 Sum_probs=138.4
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCcc----------------chhchHHHHHHHHHhCCccEEEc-CC---CCC
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRT----------------EVEDQFKLIAAIKEVGNIKRFFP-TE---YGS 65 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~----------------~~~~~~~li~aa~~~g~vk~~v~-S~---~~~ 65 (258)
+++++.+|+.|.+.+.++++++|+|||+++.. ++....+++++|++.+ +|+||+ |+ |+.
T Consensus 65 ~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~ 143 (370)
T PLN02695 65 CHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSACIYPE 143 (370)
T ss_pred cceEEECCCCCHHHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCC
Confidence 36788899999999999999999999999632 1456789999999999 999998 65 332
Q ss_pred CCC--------CC--CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCC--C--C-CCC--CC-CC
Q 025054 66 NVD--------AG--HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMA--Q--P-GAT--AP-PR 123 (258)
Q Consensus 66 ~~~--------~~--~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~--~--~-~~~--~~-~~ 123 (258)
... +. .+..|.++|..+|..+|+.++. .+++++++||+.+||+...... . + .+. .. ..
T Consensus 144 ~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~ 223 (370)
T PLN02695 144 FKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTST 223 (370)
T ss_pred ccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCC
Confidence 110 01 1234556777899999998754 6899999999999997432100 0 0 000 01 12
Q ss_pred CceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEec
Q 025054 124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYV 193 (258)
Q Consensus 124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~ 193 (258)
..+.++|+|++.++|+|++|+++++..++..+ .++.||+++ ++.+|++|+++.+.+..|.+.++...
T Consensus 224 ~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~--~~~~~nv~~-~~~~s~~el~~~i~~~~g~~~~i~~~ 290 (370)
T PLN02695 224 DEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD--FREPVNIGS-DEMVSMNEMAEIALSFENKKLPIKHI 290 (370)
T ss_pred CCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc--CCCceEecC-CCceeHHHHHHHHHHHhCCCCCceec
Confidence 46778899999999999999999999987765 467899987 56999999999999999976655443
No 11
>PLN02427 UDP-apiose/xylose synthase
Probab=99.81 E-value=3.7e-19 Score=152.75 Aligned_cols=179 Identities=19% Similarity=0.239 Sum_probs=133.4
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCC---CCC
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEY---GSN 66 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~---~~~ 66 (258)
+++++.+|+.|.+.+.++++++|+|||+++... +.++.+++++|++++ ++||+ |+. |..
T Consensus 66 ~~~~~~~Dl~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~ 143 (386)
T PLN02427 66 RIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKT 143 (386)
T ss_pred CeEEEEcCCCChHHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCC
Confidence 689999999999999999999999999997311 445778999998876 78988 653 321
Q ss_pred C----CCCCCC----------------------CCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCC-
Q 025054 67 V----DAGHPI----------------------EPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ- 115 (258)
Q Consensus 67 ~----~~~~~~----------------------~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~- 115 (258)
. .+..+. .+.++|..+|..+|+++.. .+++++++||+.+||+.......
T Consensus 144 ~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~ 223 (386)
T PLN02427 144 IGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGI 223 (386)
T ss_pred cCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccc
Confidence 1 000000 1224677899999999865 58999999999999975321100
Q ss_pred -------CC------CCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC-CCCceEEEcCCCCccCHHHHHHHHH
Q 025054 116 -------PG------ATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYLRPPKNIYSFKELVALWE 181 (258)
Q Consensus 116 -------~~------~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l~g~~~~~t~~e~~~~~~ 181 (258)
.. ......+.+.++|+|++.++|||++|+|++++.+++++. ..+++||++++++.+|++|+++.+.
T Consensus 224 ~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~ 303 (386)
T PLN02427 224 DGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMT 303 (386)
T ss_pred cccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHH
Confidence 00 001234456778888899999999999999999998763 3578999996434899999999999
Q ss_pred HHhCC
Q 025054 182 KKIGK 186 (258)
Q Consensus 182 ~~~g~ 186 (258)
+.+|.
T Consensus 304 ~~~g~ 308 (386)
T PLN02427 304 EVYAK 308 (386)
T ss_pred HHhcc
Confidence 99985
No 12
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.81 E-value=5.6e-19 Score=153.46 Aligned_cols=185 Identities=22% Similarity=0.224 Sum_probs=136.6
Q ss_pred ceeEEeccCCCHHHHHHhhC--CCcEEEEccCcc------------------chhchHHHHHHHHHhCCcc-EEEc-CC-
Q 025054 6 NCLIAQGDLHDHESLVKAIK--PVDVVISAVGRT------------------EVEDQFKLIAAIKEVGNIK-RFFP-TE- 62 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~------------------~~~~~~~li~aa~~~g~vk-~~v~-S~- 62 (258)
+++++.+|+.|.+.+.++++ ++|+|||+++.. ++.++.+++++|++.| ++ +||+ |+
T Consensus 114 ~v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~ 192 (442)
T PLN02572 114 EIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTM 192 (442)
T ss_pred cceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecc
Confidence 58899999999999999998 489999998531 1567889999999999 86 8997 54
Q ss_pred --CCCCCC---C-----------C---CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCC------
Q 025054 63 --YGSNVD---A-----------G---HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTM------ 113 (258)
Q Consensus 63 --~~~~~~---~-----------~---~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~------ 113 (258)
||.... + . .+..|.++|..+|...|.+++. .+++++++|++.+||+....-
T Consensus 193 ~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~l 272 (442)
T PLN02572 193 GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEEL 272 (442)
T ss_pred eecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCccccccccc
Confidence 442110 0 0 1233556788899999988754 599999999999999753210
Q ss_pred CC-------C-C------CCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCC--ceEEEcCCCCccCHHHHH
Q 025054 114 AQ-------P-G------ATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLN--KTLYLRPPKNIYSFKELV 177 (258)
Q Consensus 114 ~~-------~-~------~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~--~~~~l~g~~~~~t~~e~~ 177 (258)
.. . . .....++.+.++|+|++.++|+|++|+++++..+++.+...| ..||+++ ..+|++|++
T Consensus 273 i~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs--~~~si~el~ 350 (442)
T PLN02572 273 INRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT--EQFSVNELA 350 (442)
T ss_pred ccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC--CceeHHHHH
Confidence 00 0 0 001123456788999999999999999999999998653233 4788874 479999999
Q ss_pred HHHHHH---hCCcceeEec
Q 025054 178 ALWEKK---IGKTLEKIYV 193 (258)
Q Consensus 178 ~~~~~~---~g~~~~~~~~ 193 (258)
+.+.+. +|.+..+...
T Consensus 351 ~~i~~~~~~~g~~~~~~~~ 369 (442)
T PLN02572 351 KLVTKAGEKLGLDVEVISV 369 (442)
T ss_pred HHHHHHHHhhCCCCCeeeC
Confidence 999999 8876555443
No 13
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.80 E-value=5.5e-18 Score=143.51 Aligned_cols=183 Identities=22% Similarity=0.242 Sum_probs=135.1
Q ss_pred CceeEEeccCC-CHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CC
Q 025054 5 INCLIAQGDLH-DHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YG 64 (258)
Q Consensus 5 ~gv~~~~~D~~-d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~ 64 (258)
.+++++.+|+. +.+.+.++++++|+|||+++... +.++.+++++|++.+ ++||+ |+ ||
T Consensus 46 ~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg 123 (347)
T PRK11908 46 PRMHFFEGDITINKEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYG 123 (347)
T ss_pred CCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeec
Confidence 46889999997 77888899999999999986421 456789999999987 58887 55 33
Q ss_pred CCCC-----CCCC------CCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCC-----CC------
Q 025054 65 SNVD-----AGHP------IEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQP-----GA------ 118 (258)
Q Consensus 65 ~~~~-----~~~~------~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~-----~~------ 118 (258)
.... +..+ ..|.++|..+|..+|++++. .+++++++|++.+||+....+... ..
T Consensus 124 ~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~ 203 (347)
T PRK11908 124 MCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLG 203 (347)
T ss_pred cCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHH
Confidence 2111 1110 12344677799999998864 689999999999999764221100 00
Q ss_pred CCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCHHHHHHHHHHHhCCcce
Q 025054 119 TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSFKELVALWEKKIGKTLE 189 (258)
Q Consensus 119 ~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~ 189 (258)
....++.+.+.++|++.++|+|++|+++++..++..+. ..++.||+++++..+|++|+++.+.+.+|....
T Consensus 204 ~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~ 276 (347)
T PRK11908 204 HIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPE 276 (347)
T ss_pred HHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCccc
Confidence 01223456677888999999999999999999998753 457899999754579999999999999996443
No 14
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=99.80 E-value=4.7e-19 Score=138.96 Aligned_cols=178 Identities=24% Similarity=0.246 Sum_probs=144.2
Q ss_pred eeEEeccCCCHHHHHHhhCCCcEEEEccCccc-----------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCC
Q 025054 7 CLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-----------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIE 74 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-----------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~ 74 (258)
+-+...|+.|+++++++.+..++||++++-.. ..+.++|+..|+++| |+|||+ |.+|++..
T Consensus 111 vl~~~fd~~DedSIr~vvk~sNVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~G-VerfIhvS~Lganv~------ 183 (391)
T KOG2865|consen 111 VLFMKFDLRDEDSIRAVVKHSNVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAG-VERFIHVSCLGANVK------ 183 (391)
T ss_pred eeeeccCCCCHHHHHHHHHhCcEEEEeeccccccCCcccccccchHHHHHHHHHHhhC-hhheeehhhcccccc------
Confidence 56678899999999999999999999998542 678899999999999 999999 99997643
Q ss_pred CCccchhhHHHHHHHHHhCCCCeEEEecCcccccC---cCCCCCCCCCCCCCCceEeccCCC-ceeeeeccchHHHHHHH
Q 025054 75 PAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFF---LPTMAQPGATAPPRENILFYGDGQ-PKAIFNKEEDIATYTIK 150 (258)
Q Consensus 75 ~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~g~-~~~~~v~~~D~a~~~~~ 150 (258)
..+.+..+|+..|..+++.=-..|||||+.+||.. ++.+..+. ..-+.+++++.|. ..-..|++.|+|.+|+.
T Consensus 184 s~Sr~LrsK~~gE~aVrdafPeAtIirPa~iyG~eDrfln~ya~~~---rk~~~~pL~~~GekT~K~PVyV~DVaa~Ivn 260 (391)
T KOG2865|consen 184 SPSRMLRSKAAGEEAVRDAFPEATIIRPADIYGTEDRFLNYYASFW---RKFGFLPLIGKGEKTVKQPVYVVDVAAAIVN 260 (391)
T ss_pred ChHHHHHhhhhhHHHHHhhCCcceeechhhhcccchhHHHHHHHHH---HhcCceeeecCCcceeeccEEEehHHHHHHH
Confidence 35678899999999999976679999999999943 33222211 1123567777663 33447899999999999
Q ss_pred HhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCH
Q 025054 151 AVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTE 195 (258)
Q Consensus 151 ~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~ 195 (258)
++++|...|++|.+.||. .++..|+++.+-+...+-..|...+.
T Consensus 261 AvkDp~s~Gktye~vGP~-~yql~eLvd~my~~~~~~~ry~r~~m 304 (391)
T KOG2865|consen 261 AVKDPDSMGKTYEFVGPD-RYQLSELVDIMYDMAREWPRYVRLPM 304 (391)
T ss_pred hccCccccCceeeecCCc-hhhHHHHHHHHHHHHhhccccccCCc
Confidence 999998899999999985 99999999999988776556666554
No 15
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.80 E-value=1.3e-18 Score=159.16 Aligned_cols=182 Identities=18% Similarity=0.185 Sum_probs=138.4
Q ss_pred CceeEEeccCCCHHHHHHhh--CCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---C
Q 025054 5 INCLIAQGDLHDHESLVKAI--KPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---Y 63 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al--~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~ 63 (258)
.+++++.+|++|.+.+..++ .++|+|||+++... +.++.+++++|++.+++++||+ |+ |
T Consensus 57 ~~v~~~~~Dl~d~~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vy 136 (668)
T PLN02260 57 PNFKFVKGDIASADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVY 136 (668)
T ss_pred CCeEEEECCCCChHHHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHh
Confidence 46899999999998888776 58999999998532 4567899999999876899998 65 3
Q ss_pred CCCC-------CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC--C-CCCCCCCCCCCceEec
Q 025054 64 GSNV-------DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT--M-AQPGATAPPRENILFY 129 (258)
Q Consensus 64 ~~~~-------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 129 (258)
|... .+..+..|.++|..+|..+|+++++ .+++++++||+.+||..... + ..+......++.+.++
T Consensus 137 g~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~ 216 (668)
T PLN02260 137 GETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIH 216 (668)
T ss_pred CCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEe
Confidence 3211 1112233567788899999999864 58999999999999964311 0 0000011233457788
Q ss_pred cCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcc
Q 025054 130 GDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL 188 (258)
Q Consensus 130 g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~ 188 (258)
|+|++.++|+|++|+|+++..++..+ ..+++||++++ +.+|+.|+++.+.+.+|.+.
T Consensus 217 g~g~~~r~~ihV~Dva~a~~~~l~~~-~~~~vyni~~~-~~~s~~el~~~i~~~~g~~~ 273 (668)
T PLN02260 217 GDGSNVRSYLYCEDVAEAFEVVLHKG-EVGHVYNIGTK-KERRVIDVAKDICKLFGLDP 273 (668)
T ss_pred cCCCceEeeEEHHHHHHHHHHHHhcC-CCCCEEEECCC-CeeEHHHHHHHHHHHhCCCC
Confidence 99999999999999999999988764 35789999974 58999999999999999753
No 16
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.79 E-value=2.8e-18 Score=143.29 Aligned_cols=179 Identities=21% Similarity=0.291 Sum_probs=133.7
Q ss_pred ceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCcc-EEEc-CC---C
Q 025054 6 NCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIK-RFFP-TE---Y 63 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk-~~v~-S~---~ 63 (258)
+++++.+|++|++++.+++++ +|+|||+++... +.+..+++++|++.+ ++ ++|+ |+ +
T Consensus 51 ~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~v~ 129 (317)
T TIGR01181 51 RYRFVKGDIGDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYW-HEFRFHHISTDEVY 129 (317)
T ss_pred CcEEEEcCCcCHHHHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEeecccee
Confidence 578899999999999999997 899999997521 456789999999876 44 7887 65 3
Q ss_pred CCCC-----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC--CC-CCCCCCCCCCceEeccC
Q 025054 64 GSNV-----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT--MA-QPGATAPPRENILFYGD 131 (258)
Q Consensus 64 ~~~~-----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~g~ 131 (258)
|... .+..+..+...|..+|..+|.+++. .+++++++||+.+||..... +. .+.......+.+.++++
T Consensus 130 g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (317)
T TIGR01181 130 GDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGD 209 (317)
T ss_pred CCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCC
Confidence 3211 1112233455677899999988763 58999999999999964321 00 00000122335677888
Q ss_pred CCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCc
Q 025054 132 GQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKT 187 (258)
Q Consensus 132 g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~ 187 (258)
|++.++|+|++|+++++..+++++ ..++.|+++++ +.+|+.|+++.+.+.+|.+
T Consensus 210 g~~~~~~i~v~D~a~~~~~~~~~~-~~~~~~~~~~~-~~~s~~~~~~~i~~~~~~~ 263 (317)
T TIGR01181 210 GQQVRDWLYVEDHCRAIYLVLEKG-RVGETYNIGGG-NERTNLEVVETILELLGKD 263 (317)
T ss_pred CceEEeeEEHHHHHHHHHHHHcCC-CCCceEEeCCC-CceeHHHHHHHHHHHhCCC
Confidence 899999999999999999998764 35789999874 5899999999999999974
No 17
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.79 E-value=3.2e-18 Score=145.37 Aligned_cols=180 Identities=18% Similarity=0.250 Sum_probs=134.8
Q ss_pred ceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHh---------CCccEEE
Q 025054 6 NCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEV---------GNIKRFF 59 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~---------g~vk~~v 59 (258)
.++++.+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++. + +++||
T Consensus 52 ~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~-~~~~i 130 (355)
T PRK10217 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKS-AFRFH 130 (355)
T ss_pred ceEEEECCCcChHHHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccC-ceEEE
Confidence 467889999999999999984 899999997521 56788999999863 5 78999
Q ss_pred c-CC---CCCC------CCCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCC-CCCC--CCCC
Q 025054 60 P-TE---YGSN------VDAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMA-QPGA--TAPP 122 (258)
Q Consensus 60 ~-S~---~~~~------~~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~-~~~~--~~~~ 122 (258)
+ |+ |+.. .++..+..|..+|..+|..+|.+++. .+++++++||+.+||+....-. ...+ ....
T Consensus 131 ~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~ 210 (355)
T PRK10217 131 HISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALA 210 (355)
T ss_pred EecchhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhc
Confidence 8 65 3311 11112233556777899999988854 6899999999999997642100 0000 0122
Q ss_pred CCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcc
Q 025054 123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL 188 (258)
Q Consensus 123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~ 188 (258)
++.+.++|+|++.++|+|++|+++++..++..+. .++.||+++ ++.+|++|+++.+.+.+|+..
T Consensus 211 ~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~~-~~~~yni~~-~~~~s~~~~~~~i~~~~~~~~ 274 (355)
T PRK10217 211 GKPLPVYGNGQQIRDWLYVEDHARALYCVATTGK-VGETYNIGG-HNERKNLDVVETICELLEELA 274 (355)
T ss_pred CCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcCC-CCCeEEeCC-CCcccHHHHHHHHHHHhcccc
Confidence 3456778999999999999999999999987643 578999997 468999999999999998643
No 18
>PLN02214 cinnamoyl-CoA reductase
Probab=99.77 E-value=6.2e-18 Score=142.79 Aligned_cols=174 Identities=17% Similarity=0.128 Sum_probs=126.6
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----------hhchHHHHHHHHHhCCccEEEc-CCCCCC----C---
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN----V--- 67 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----------~~~~~~li~aa~~~g~vk~~v~-S~~~~~----~--- 67 (258)
+++++.+|++|.+++.++++++|+|||+++... +.++.+++++|++++ +++||+ |+.++. .
T Consensus 61 ~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~ 139 (342)
T PLN02214 61 RLILCKADLQDYEALKAAIDGCDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDP 139 (342)
T ss_pred cEEEEecCcCChHHHHHHHhcCCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCC
Confidence 478899999999999999999999999997532 677899999999999 999998 653211 1
Q ss_pred ----CCCC------CCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCC--C-CCCCCCCCceEecc
Q 025054 68 ----DAGH------PIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ--P-GATAPPRENILFYG 130 (258)
Q Consensus 68 ----~~~~------~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~g 130 (258)
++.. ...+..+|..+|..+|+++.. .+++++++||+.+||+....... . .......+.....
T Consensus 140 ~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~- 218 (342)
T PLN02214 140 EAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTY- 218 (342)
T ss_pred CcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccC-
Confidence 0100 111334577799999998864 58999999999999975431100 0 0000001111222
Q ss_pred CCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054 131 DGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG 185 (258)
Q Consensus 131 ~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g 185 (258)
+++.++|||++|+|++++.+++.+. .++.|++++ ...|++|+++.+.+.++
T Consensus 219 -~~~~~~~i~V~Dva~a~~~al~~~~-~~g~yn~~~--~~~~~~el~~~i~~~~~ 269 (342)
T PLN02214 219 -ANLTQAYVDVRDVALAHVLVYEAPS-ASGRYLLAE--SARHRGEVVEILAKLFP 269 (342)
T ss_pred -CCCCcCeeEHHHHHHHHHHHHhCcc-cCCcEEEec--CCCCHHHHHHHHHHHCC
Confidence 3456899999999999999998764 456888875 37899999999999986
No 19
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.76 E-value=1.4e-17 Score=151.75 Aligned_cols=181 Identities=22% Similarity=0.240 Sum_probs=132.7
Q ss_pred CceeEEeccCCCHHH-HHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CC
Q 025054 5 INCLIAQGDLHDHES-LVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YG 64 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~-l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~ 64 (258)
.+++++.+|++|.+. +.++++++|+|||+++... +.++.++++||++++ ++||+ |+ ||
T Consensus 360 ~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg 437 (660)
T PRK08125 360 PRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYG 437 (660)
T ss_pred CceEEEeccccCcHHHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcC
Confidence 368899999998655 6788999999999987321 567789999999987 68887 55 33
Q ss_pred CCC----CCCC------CC-CCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCC--C---C------C
Q 025054 65 SNV----DAGH------PI-EPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ--P---G------A 118 (258)
Q Consensus 65 ~~~----~~~~------~~-~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~--~---~------~ 118 (258)
... ++.. +. .|.++|..+|..+|++++. .+++++++||+.+||+....+.. . . .
T Consensus 438 ~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~ 517 (660)
T PRK08125 438 MCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL 517 (660)
T ss_pred CCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHH
Confidence 211 1111 00 1234577899999999854 58999999999999975321100 0 0 0
Q ss_pred CCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCHHHHHHHHHHHhCCc
Q 025054 119 TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSFKELVALWEKKIGKT 187 (258)
Q Consensus 119 ~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~ 187 (258)
....++.+.++|+|++.++|+|++|+++++..+++.+. ..+++|+++++...+|++|+++.+.+.+|.+
T Consensus 518 ~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~ 588 (660)
T PRK08125 518 NLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH 588 (660)
T ss_pred HhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence 11224456778889999999999999999999988652 2467899986423799999999999999964
No 20
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.76 E-value=6.9e-17 Score=136.29 Aligned_cols=187 Identities=16% Similarity=0.227 Sum_probs=132.7
Q ss_pred ceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCC--
Q 025054 6 NCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS-- 65 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~-- 65 (258)
++.++.+|++|.+++.++++ ++|+|||+++... +.+..+++++|+++| +++||+ |+.+.
T Consensus 51 ~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg 129 (338)
T PRK10675 51 HPTFVEGDIRNEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYG 129 (338)
T ss_pred CceEEEccCCCHHHHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhC
Confidence 46778999999999999987 6899999986421 356789999999999 999998 65422
Q ss_pred -CC----CCCCCC-CCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCCC------C-CCC-----CCC
Q 025054 66 -NV----DAGHPI-EPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMAQ------P-GAT-----APP 122 (258)
Q Consensus 66 -~~----~~~~~~-~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~~------~-~~~-----~~~ 122 (258)
.. ++..+. .|..+|..+|..+|+++++ .+++++++|++.+||.....+.. . ... ...
T Consensus 130 ~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~ 209 (338)
T PRK10675 130 DQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAV 209 (338)
T ss_pred CCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHh
Confidence 11 111111 3456777799999999864 36889999998888753111000 0 000 011
Q ss_pred --CCceEecc------CCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEe
Q 025054 123 --RENILFYG------DGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIY 192 (258)
Q Consensus 123 --~~~~~~~g------~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~ 192 (258)
...+.++| +|.+.++++|++|+|++++.+++.. ...+++|++++ ++.+|++|+++.+.+.+|.+.++..
T Consensus 210 ~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~ 288 (338)
T PRK10675 210 GRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGA-GVGSSVLDVVNAFSKACGKPVNYHF 288 (338)
T ss_pred cCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecC-CCceeHHHHHHHHHHHhCCCCCeee
Confidence 11233443 5778899999999999999998752 22457999987 4689999999999999998776654
Q ss_pred cC
Q 025054 193 VT 194 (258)
Q Consensus 193 ~~ 194 (258)
.+
T Consensus 289 ~~ 290 (338)
T PRK10675 289 AP 290 (338)
T ss_pred CC
Confidence 43
No 21
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.76 E-value=9.8e-18 Score=136.24 Aligned_cols=176 Identities=16% Similarity=0.137 Sum_probs=125.6
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCC--
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVD-- 68 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~-- 68 (258)
..+++.+|+.|.+++.+|++|||.|||++.+.. +.+++|+++||+++++|||+|+ |+..+-..
T Consensus 58 ~l~l~~aDL~d~~sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~ 137 (327)
T KOG1502|consen 58 RLKLFKADLLDEGSFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNG 137 (327)
T ss_pred cceEEeccccccchHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCC
Confidence 378999999999999999999999999998742 7889999999999988999999 76543211
Q ss_pred ----CCCCCCC------------CccchhhHHHHHHHH----HhCCCCeEEEecCcccccCcCCCCCCCC---CCCCCCc
Q 025054 69 ----AGHPIEP------------AKSGYARKAKIRRAI----EAEGIPHTYVSCNCSFGFFLPTMAQPGA---TAPPREN 125 (258)
Q Consensus 69 ----~~~~~~~------------~~~~~~~k~~~e~~l----~~~~~~~t~lr~~~~~~~~~~~~~~~~~---~~~~~~~ 125 (258)
.....+. ...|..+|..+|+.. ++.+++.+.|.|+.++|+.+..-..... ....++.
T Consensus 138 ~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~ 217 (327)
T KOG1502|consen 138 PNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGL 217 (327)
T ss_pred cCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcc
Confidence 1111111 123445899998765 4468999999999999987644111100 0011222
Q ss_pred eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK 186 (258)
Q Consensus 126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~ 186 (258)
...+. +....+||++|+|++.+.+++.|...| .|.+.+ +..++.|+++++.+.+..
T Consensus 218 ~~~~~--n~~~~~VdVrDVA~AHv~a~E~~~a~G-Ryic~~--~~~~~~ei~~~l~~~~P~ 273 (327)
T KOG1502|consen 218 AETYP--NFWLAFVDVRDVALAHVLALEKPSAKG-RYICVG--EVVSIKEIADILRELFPD 273 (327)
T ss_pred cccCC--CCceeeEeHHHHHHHHHHHHcCcccCc-eEEEec--CcccHHHHHHHHHHhCCC
Confidence 22221 334559999999999999999997554 555553 477899999999988753
No 22
>PLN02686 cinnamoyl-CoA reductase
Probab=99.76 E-value=1.9e-17 Score=140.99 Aligned_cols=181 Identities=14% Similarity=0.075 Sum_probs=128.5
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHh-CCccEEEc-CCC-----
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEV-GNIKRFFP-TEY----- 63 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~-g~vk~~v~-S~~----- 63 (258)
+++++.+|++|.+++.++++++|.|||+++... +.++.++++||++. + |+|||+ |+.
T Consensus 108 ~~~~v~~Dl~d~~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~-v~r~V~~SS~~~~vy 186 (367)
T PLN02686 108 GIWTVMANLTEPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTES-VRKCVFTSSLLACVW 186 (367)
T ss_pred ceEEEEcCCCCHHHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccHHHhcc
Confidence 578899999999999999999999999986421 45678999999986 7 999998 653
Q ss_pred CCC--CC------CC------CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054 64 GSN--VD------AG------HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN 125 (258)
Q Consensus 64 ~~~--~~------~~------~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~ 125 (258)
+.. .. +. .+..+..+|..+|..+|++++. .++++++|||+++||+...............+.
T Consensus 187 g~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~ 266 (367)
T PLN02686 187 RQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGA 266 (367)
T ss_pred cccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCC
Confidence 110 00 00 0111334577799999998853 589999999999999864211100000111223
Q ss_pred eEeccCCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI 191 (258)
Q Consensus 126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~ 191 (258)
+.++|+|. .+++|++|++++++.+++.+ ...++.| +++ ++.+|++|+++.+.+.+|.+....
T Consensus 267 ~~~~g~g~--~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~-g~~~s~~e~~~~i~~~~g~~~~~~ 330 (367)
T PLN02686 267 QEMLADGL--LATADVERLAEAHVCVYEAMGNKTAFGRY-ICF-DHVVSREDEAEELARQIGLPINKI 330 (367)
T ss_pred CccCCCCC--cCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEe-CCCccHHHHHHHHHHHcCCCCCcC
Confidence 45566554 46999999999999999753 2345667 654 569999999999999999765543
No 23
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.76 E-value=1.8e-17 Score=143.78 Aligned_cols=178 Identities=16% Similarity=0.207 Sum_probs=128.2
Q ss_pred CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCC---CC
Q 025054 5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEY---GS 65 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~---~~ 65 (258)
.+++++.+|+.+. ++.++|+|||+++... +.++.++++||+++| + +||+ |+. +.
T Consensus 167 ~~~~~i~~D~~~~-----~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~ 239 (442)
T PLN02206 167 PNFELIRHDVVEP-----ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGD 239 (442)
T ss_pred CceEEEECCccCh-----hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCC
Confidence 4567777777654 4568999999997321 567899999999999 7 6887 553 32
Q ss_pred CCC----CC-----CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCC-----CCCCCCCCCCceE
Q 025054 66 NVD----AG-----HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMA-----QPGATAPPRENIL 127 (258)
Q Consensus 66 ~~~----~~-----~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 127 (258)
... +. .+..+.+.|..+|..+|++++. .+++++++|++.+||.....-. .+.......+.+.
T Consensus 240 ~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~ 319 (442)
T PLN02206 240 PLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLT 319 (442)
T ss_pred CCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcE
Confidence 110 10 1122245577799999998864 5899999999999997532100 0000012345677
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEe
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIY 192 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~ 192 (258)
++|+|++.++|+|++|+++++..+++.+ .++.||++++ +.+|++|+++.+.+.+|.+.++..
T Consensus 320 i~g~G~~~rdfi~V~Dva~ai~~a~e~~--~~g~yNIgs~-~~~sl~Elae~i~~~~g~~~~i~~ 381 (442)
T PLN02206 320 VYGDGKQTRSFQFVSDLVEGLMRLMEGE--HVGPFNLGNP-GEFTMLELAKVVQETIDPNAKIEF 381 (442)
T ss_pred EeCCCCEEEeEEeHHHHHHHHHHHHhcC--CCceEEEcCC-CceeHHHHHHHHHHHhCCCCceee
Confidence 8899999999999999999999998754 4568999974 589999999999999987655543
No 24
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.76 E-value=2.4e-17 Score=139.84 Aligned_cols=179 Identities=18% Similarity=0.239 Sum_probs=134.2
Q ss_pred ceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHh---------CCccEEE
Q 025054 6 NCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEV---------GNIKRFF 59 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~---------g~vk~~v 59 (258)
.++++.+|+.|.+++.++++ ++|+|||+++... +.++.+++++|++. + +++||
T Consensus 51 ~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~-~~~~i 129 (352)
T PRK10084 51 RYVFEHADICDRAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKN-AFRFH 129 (352)
T ss_pred ceEEEEecCCCHHHHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhcccccccccc-ceeEE
Confidence 36788999999999999997 4899999997521 56789999999874 4 77898
Q ss_pred c-CC---CCCCC--------------CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC--CCC
Q 025054 60 P-TE---YGSNV--------------DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT--MAQ 115 (258)
Q Consensus 60 ~-S~---~~~~~--------------~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~--~~~ 115 (258)
+ |+ |+... .+..+..|.+.|..+|..+|.+++. .+++++++|++.+||+.... +..
T Consensus 130 ~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~ 209 (352)
T PRK10084 130 HISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIP 209 (352)
T ss_pred EecchhhcCCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHH
Confidence 7 55 44210 1112334566777899999988864 58999999999999975311 000
Q ss_pred CC-CCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCc
Q 025054 116 PG-ATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKT 187 (258)
Q Consensus 116 ~~-~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~ 187 (258)
.. .....++.+.++|+|++.++++|++|+++++..+++.+ ..++.|++++ ++..|+.|+++.+.+.+|..
T Consensus 210 ~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~-~~~~~yni~~-~~~~s~~~~~~~i~~~~~~~ 280 (352)
T PRK10084 210 LVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTEG-KAGETYNIGG-HNEKKNLDVVLTICDLLDEI 280 (352)
T ss_pred HHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcC-CCCceEEeCC-CCcCcHHHHHHHHHHHhccc
Confidence 00 00122345677888999999999999999999988764 3578999997 45899999999999999864
No 25
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.75 E-value=1.7e-17 Score=143.64 Aligned_cols=178 Identities=15% Similarity=0.206 Sum_probs=127.9
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CCCC
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGSN 66 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~~ 66 (258)
+++++.+|+.+. ++.++|+|||+++... +.++.+++++|++++ + +||+ |+ ||..
T Consensus 169 ~~~~~~~Di~~~-----~~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~VYg~~ 241 (436)
T PLN02166 169 RFELIRHDVVEP-----ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSEVYGDP 241 (436)
T ss_pred ceEEEECccccc-----cccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHHHhCCC
Confidence 456666666543 4678999999996321 567899999999998 6 6777 55 3321
Q ss_pred C----CCC-----CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCC-----CCCCCCCCCCceEe
Q 025054 67 V----DAG-----HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMA-----QPGATAPPRENILF 128 (258)
Q Consensus 67 ~----~~~-----~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 128 (258)
. ++. .+..+..+|..+|..+|++++. .+++++++|++.+||....... .+......++.+.+
T Consensus 242 ~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v 321 (436)
T PLN02166 242 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTV 321 (436)
T ss_pred CCCCCCccccccCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEE
Confidence 1 111 1223445677799999998764 5899999999999997532100 00000123456778
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEec
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYV 193 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~ 193 (258)
+|+|++.++|+|++|+++++..+++.+ .++.||+++ ++.+|++|+++.+.+.+|.+.++...
T Consensus 322 ~g~g~~~rdfi~V~Dva~ai~~~~~~~--~~giyNIgs-~~~~Si~ela~~I~~~~g~~~~i~~~ 383 (436)
T PLN02166 322 YGDGKQTRSFQYVSDLVDGLVALMEGE--HVGPFNLGN-PGEFTMLELAEVVKETIDSSATIEFK 383 (436)
T ss_pred eCCCCeEEeeEEHHHHHHHHHHHHhcC--CCceEEeCC-CCcEeHHHHHHHHHHHhCCCCCeeeC
Confidence 899999999999999999999998754 456999987 46899999999999999976655443
No 26
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.75 E-value=7e-17 Score=136.56 Aligned_cols=181 Identities=16% Similarity=0.168 Sum_probs=132.8
Q ss_pred CceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCcc---EEEc-CC-
Q 025054 5 INCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIK---RFFP-TE- 62 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk---~~v~-S~- 62 (258)
.+++++.+|++|.+++.+++++ +|+|||+++... +.++.+++++|+++| ++ +||+ |+
T Consensus 55 ~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~ 133 (343)
T TIGR01472 55 ARMKLHYGDLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTS 133 (343)
T ss_pred cceeEEEeccCCHHHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccH
Confidence 3588999999999999999985 699999998521 346789999999988 74 7887 65
Q ss_pred --CCCCC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC-CCCCCC-----CCCCCC-c
Q 025054 63 --YGSNV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT-MAQPGA-----TAPPRE-N 125 (258)
Q Consensus 63 --~~~~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~-~~~~~~-----~~~~~~-~ 125 (258)
||... .+..+..|.++|..+|..+|.+++. .+++++..|+...+++.... +..... ....++ .
T Consensus 134 ~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~ 213 (343)
T TIGR01472 134 ELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQE 213 (343)
T ss_pred HhhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCC
Confidence 44321 1222344667888899999998864 47888888887777654211 000000 001121 2
Q ss_pred eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcce
Q 025054 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLE 189 (258)
Q Consensus 126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~ 189 (258)
..++|+|++.++|+|++|+++++..+++.+ .++.||+++ ++.+|++|+++.+.+.+|++..
T Consensus 214 ~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~--~~~~yni~~-g~~~s~~e~~~~i~~~~g~~~~ 274 (343)
T TIGR01472 214 KLYLGNLDAKRDWGHAKDYVEAMWLMLQQD--KPDDYVIAT-GETHSVREFVEVSFEYIGKTLN 274 (343)
T ss_pred ceeeCCCccccCceeHHHHHHHHHHHHhcC--CCccEEecC-CCceeHHHHHHHHHHHcCCCcc
Confidence 345688999999999999999999998765 346899986 5799999999999999997654
No 27
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.75 E-value=2.1e-17 Score=136.29 Aligned_cols=174 Identities=17% Similarity=0.092 Sum_probs=128.3
Q ss_pred eccCCCHHHHHHhhCCC--cEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCC---CCCC--
Q 025054 11 QGDLHDHESLVKAIKPV--DVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEY---GSNV-- 67 (258)
Q Consensus 11 ~~D~~d~~~l~~al~g~--d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~---~~~~-- 67 (258)
.+|+.|.+++.++++++ |+|||+++... +....+++++|++.+ + +||+ |+. +...
T Consensus 33 ~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~vy~~~~~~ 110 (287)
T TIGR01214 33 QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-A-RLVHISTDYVFDGEGKR 110 (287)
T ss_pred ccCCCCHHHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeeecCCCCC
Confidence 36899999999999976 99999997531 346889999999988 6 7887 653 2211
Q ss_pred --CCCCCCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcC-CCC-CCCCCCCCCCceEeccCCCceeeeeccch
Q 025054 68 --DAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLP-TMA-QPGATAPPRENILFYGDGQPKAIFNKEED 143 (258)
Q Consensus 68 --~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~g~g~~~~~~v~~~D 143 (258)
.+..+..+..+|..+|..+|++++..+.+++++||+.+||...+ .+. .........+.+.+.+ ++.+++++++|
T Consensus 111 ~~~E~~~~~~~~~Y~~~K~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~D 188 (287)
T TIGR01214 111 PYREDDATNPLNVYGQSKLAGEQAIRAAGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVD--DQIGSPTYAKD 188 (287)
T ss_pred CCCCCCCCCCcchhhHHHHHHHHHHHHhCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEec--CCCcCCcCHHH
Confidence 11122234566778999999999998999999999999987531 110 0000012223455554 35688999999
Q ss_pred HHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcce
Q 025054 144 IATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLE 189 (258)
Q Consensus 144 ~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~ 189 (258)
+++++..++..+...++.||++++ +.+|+.|+++.+.+.+|.+..
T Consensus 189 va~a~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~~~~~~ 233 (287)
T TIGR01214 189 LARVIAALLQRLARARGVYHLANS-GQCSWYEFAQAIFEEAGADGL 233 (287)
T ss_pred HHHHHHHHHhhccCCCCeEEEECC-CCcCHHHHHHHHHHHhCcccc
Confidence 999999999876457889999985 599999999999999997643
No 28
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.75 E-value=9.6e-17 Score=146.86 Aligned_cols=189 Identities=10% Similarity=0.066 Sum_probs=137.6
Q ss_pred CceeEEeccCCCH------HHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCC
Q 025054 5 INCLIAQGDLHDH------ESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS 65 (258)
Q Consensus 5 ~gv~~~~~D~~d~------~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~ 65 (258)
.+++++.+|+.|+ +.+.++ +++|+|||+++... +.++.+++++|++.+ +++||+ |+.+.
T Consensus 51 ~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v 128 (657)
T PRK07201 51 DRVVPLVGDLTEPGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAV 128 (657)
T ss_pred CcEEEEecccCCccCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEecccc
Confidence 4688999999884 455555 89999999997421 678899999999999 999998 66433
Q ss_pred C---CC---CC---CCCCCCccchhhHHHHHHHHHh-CCCCeEEEecCcccccCcCCCCC--CC---------CCCCCCC
Q 025054 66 N---VD---AG---HPIEPAKSGYARKAKIRRAIEA-EGIPHTYVSCNCSFGFFLPTMAQ--PG---------ATAPPRE 124 (258)
Q Consensus 66 ~---~~---~~---~~~~~~~~~~~~k~~~e~~l~~-~~~~~t~lr~~~~~~~~~~~~~~--~~---------~~~~~~~ 124 (258)
. .. +. ....+..+|..+|..+|+++++ .++++|++||+.+||........ .+ .......
T Consensus 129 ~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 208 (657)
T PRK07201 129 AGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPS 208 (657)
T ss_pred ccCccCccccccchhhcCCCCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCc
Confidence 1 11 00 0112345688899999999985 78999999999999953211000 00 0000011
Q ss_pred ceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcc---eeEecCHH
Q 025054 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL---EKIYVTED 196 (258)
Q Consensus 125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~---~~~~~~~~ 196 (258)
.+.+++.+....++++++|+++++..++..+...++.|+++++ +.+|++|+++.+.+.+|.+. ....+|..
T Consensus 209 ~~~~~~~~~~~~~~v~vddva~ai~~~~~~~~~~g~~~ni~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~ 282 (657)
T PRK07201 209 WLPMVGPDGGRTNIVPVDYVADALDHLMHKDGRDGQTFHLTDP-KPQRVGDIYNAFARAAGAPPDARLFGFLPGF 282 (657)
T ss_pred ccccccCCCCeeeeeeHHHHHHHHHHHhcCcCCCCCEEEeCCC-CCCcHHHHHHHHHHHhCCCccccccccCChH
Confidence 2344555667789999999999999998866556889999985 59999999999999999877 56666653
No 29
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.74 E-value=3.4e-17 Score=137.27 Aligned_cols=173 Identities=16% Similarity=0.154 Sum_probs=124.4
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--------------hhchHHHHHHHHHh-CCccEEEc-CCCCCC--C
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--------------VEDQFKLIAAIKEV-GNIKRFFP-TEYGSN--V 67 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~-g~vk~~v~-S~~~~~--~ 67 (258)
+++++.+|++|.+++.++++++|+|||+++... +.++.+++++|++. + ++|||+ |+.+.. .
T Consensus 57 ~~~~~~~Dl~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-v~rvV~~SS~~~~~~~ 135 (322)
T PLN02986 57 RLKLFKADLLEESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPS-VKRVILTSSTAAVLFR 135 (322)
T ss_pred ceEEEecCCCCcchHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCC-ccEEEEecchhheecC
Confidence 578999999999999999999999999997421 56678999999985 6 999998 665321 0
Q ss_pred C----------CCCCC------CCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCC--CC-CCCCC
Q 025054 68 D----------AGHPI------EPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPG--AT-APPRE 124 (258)
Q Consensus 68 ~----------~~~~~------~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~--~~-~~~~~ 124 (258)
. +.... .+...|..+|..+|.++.+ .+++++++||+.+||+......... .. ....+
T Consensus 136 ~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g 215 (322)
T PLN02986 136 QPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFING 215 (322)
T ss_pred CccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcC
Confidence 0 00000 1234577799999987654 6899999999999997643210000 00 00011
Q ss_pred ceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG 185 (258)
Q Consensus 125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g 185 (258)
. .++ +++.++|||++|+|++++.+++.+.. ++.|+++| +.+|++|+++.+.+.++
T Consensus 216 ~-~~~--~~~~~~~v~v~Dva~a~~~al~~~~~-~~~yni~~--~~~s~~e~~~~i~~~~~ 270 (322)
T PLN02986 216 K-NLF--NNRFYRFVDVRDVALAHIKALETPSA-NGRYIIDG--PIMSVNDIIDILRELFP 270 (322)
T ss_pred C-CCC--CCcCcceeEHHHHHHHHHHHhcCccc-CCcEEEec--CCCCHHHHHHHHHHHCC
Confidence 1 112 24567899999999999999988753 45789864 48999999999999987
No 30
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.74 E-value=2.4e-16 Score=131.12 Aligned_cols=179 Identities=16% Similarity=0.112 Sum_probs=127.2
Q ss_pred EeccCCCHHHHHHhhC--CCcEEEEccCccc----------------hhchHHHHHHHHHhCCccEEEc-CCC---CCCC
Q 025054 10 AQGDLHDHESLVKAIK--PVDVVISAVGRTE----------------VEDQFKLIAAIKEVGNIKRFFP-TEY---GSNV 67 (258)
Q Consensus 10 ~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~----------------~~~~~~li~aa~~~g~vk~~v~-S~~---~~~~ 67 (258)
..+|+.|.+++.++++ ++|+|||+++... +.++.+++++|++.+ +++||+ |+. +...
T Consensus 31 ~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~~ 109 (306)
T PLN02725 31 KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKFA 109 (306)
T ss_pred ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCCC
Confidence 3689999999999887 5799999996410 456889999999999 999998 653 3211
Q ss_pred CC----CC----CCCCCcc-chhhHHHHHHHHH----hCCCCeEEEecCcccccCcCCCCCC-C----CC-----C-CCC
Q 025054 68 DA----GH----PIEPAKS-GYARKAKIRRAIE----AEGIPHTYVSCNCSFGFFLPTMAQP-G----AT-----A-PPR 123 (258)
Q Consensus 68 ~~----~~----~~~~~~~-~~~~k~~~e~~l~----~~~~~~t~lr~~~~~~~~~~~~~~~-~----~~-----~-~~~ 123 (258)
.. .. +..|..+ |..+|..+|++++ ..+++++++||+.+||......... . .. . ...
T Consensus 110 ~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~ 189 (306)
T PLN02725 110 PQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANG 189 (306)
T ss_pred CCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcC
Confidence 10 00 1122233 6679999997664 3689999999999999753210000 0 00 0 112
Q ss_pred CceEe-ccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054 124 ENILF-YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI 191 (258)
Q Consensus 124 ~~~~~-~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~ 191 (258)
..+.+ +|+|++.++++|++|+++++..+++... .++.||+++ ++.+|+.|+++.+.+.+|.+.++.
T Consensus 190 ~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~-~~~~~ni~~-~~~~s~~e~~~~i~~~~~~~~~~~ 256 (306)
T PLN02725 190 APEVVVWGSGSPLREFLHVDDLADAVVFLMRRYS-GAEHVNVGS-GDEVTIKELAELVKEVVGFEGELV 256 (306)
T ss_pred CCeEEEcCCCCeeeccccHHHHHHHHHHHHhccc-cCcceEeCC-CCcccHHHHHHHHHHHhCCCCcee
Confidence 23344 6888999999999999999999998653 346678986 469999999999999998765543
No 31
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=99.74 E-value=2.1e-17 Score=129.70 Aligned_cols=184 Identities=19% Similarity=0.246 Sum_probs=145.7
Q ss_pred cCceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---
Q 025054 4 MINCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE--- 62 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~--- 62 (258)
+++-+++++|+.+...+...|. ..|.|+|.++... +-.+..|+++++.+|++++||+ |+
T Consensus 56 ~p~ykfv~~di~~~~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeV 135 (331)
T KOG0747|consen 56 SPNYKFVEGDIADADLVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEV 135 (331)
T ss_pred CCCceEeeccccchHHHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccce
Confidence 4678999999999888888776 6899999997532 5678899999999988999998 64
Q ss_pred CCCCCC-----CCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC---CCCCCCCCCCCCceEecc
Q 025054 63 YGSNVD-----AGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT---MAQPGATAPPRENILFYG 130 (258)
Q Consensus 63 ~~~~~~-----~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g 130 (258)
||.... +.+...|.+||.++|+++|..+++ .+++++++|.+.+||+-... +..+.......++.++.|
T Consensus 136 YGds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g 215 (331)
T KOG0747|consen 136 YGDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHG 215 (331)
T ss_pred ecCccccccccccccCCCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceec
Confidence 553221 344567899999999999999976 58999999999999964321 110001113355788899
Q ss_pred CCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcce
Q 025054 131 DGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLE 189 (258)
Q Consensus 131 ~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~ 189 (258)
+|.+.++|++++|+++++-.+++.. ..|++|||+. .++++..|+++.+.+..+....
T Consensus 216 ~g~~~rs~l~veD~~ea~~~v~~Kg-~~geIYNIgt-d~e~~~~~l~k~i~eli~~~~~ 272 (331)
T KOG0747|consen 216 DGLQTRSYLYVEDVSEAFKAVLEKG-ELGEIYNIGT-DDEMRVIDLAKDICELFEKRLP 272 (331)
T ss_pred CcccceeeEeHHHHHHHHHHHHhcC-CccceeeccC-cchhhHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998874 4799999996 5799999999999988775443
No 32
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.74 E-value=3.8e-16 Score=130.93 Aligned_cols=187 Identities=20% Similarity=0.256 Sum_probs=135.1
Q ss_pred ceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCC---C
Q 025054 6 NCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEY---G 64 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~---~ 64 (258)
+++++.+|+.|.+++.++++ ++|+|||+++... +....+++++|++.+ ++++|+ |+. +
T Consensus 48 ~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g 126 (328)
T TIGR01179 48 RVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYG 126 (328)
T ss_pred ceEEEECCCCCHHHHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcC
Confidence 46788999999999999987 6899999997421 456789999999998 999998 543 2
Q ss_pred CCC----CCCCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCCCC---CCC---------CC-C
Q 025054 65 SNV----DAGHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMAQP---GAT---------AP-P 122 (258)
Q Consensus 65 ~~~----~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~~~---~~~---------~~-~ 122 (258)
... ++..+..+..+|..+|..+|.+++. .+++++++||+.+||.....+... ... .. .
T Consensus 127 ~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (328)
T TIGR01179 127 EPSSIPISEDSPLGPINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGK 206 (328)
T ss_pred CCCCCCccccCCCCCCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhC
Confidence 111 1112223456777899999988864 689999999999999753221000 000 00 1
Q ss_pred CCceEec------cCCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecC
Q 025054 123 RENILFY------GDGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVT 194 (258)
Q Consensus 123 ~~~~~~~------g~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 194 (258)
...+.++ ++|+++++||+++|+++++..++... ...++.|+++++ +.+|++|+++.+.+.+|++.++...+
T Consensus 207 ~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~-~~~s~~ei~~~~~~~~g~~~~~~~~~ 285 (328)
T TIGR01179 207 RDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYG-QGFSVLEVIEAFKKVSGVDFPVELAP 285 (328)
T ss_pred CCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCC-CcccHHHHHHHHHHHhCCCcceEeCC
Confidence 1122222 35678899999999999999998753 235789999874 58999999999999999887765443
No 33
>PLN02240 UDP-glucose 4-epimerase
Probab=99.74 E-value=3e-16 Score=133.17 Aligned_cols=187 Identities=20% Similarity=0.204 Sum_probs=134.4
Q ss_pred ceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCC--
Q 025054 6 NCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS-- 65 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~-- 65 (258)
+++++.+|++|++.+.++++ ++|+|||+++... +..+.+++++|++.+ +++||+ |+.+.
T Consensus 59 ~~~~~~~D~~~~~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg 137 (352)
T PLN02240 59 NLVFHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYG 137 (352)
T ss_pred cceEEecCcCCHHHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhC
Confidence 57899999999999999886 6899999987421 456789999999998 999998 66322
Q ss_pred -CC----CCCCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCC-C-C-C--------CC-CC-C
Q 025054 66 -NV----DAGHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMA-Q-P-G--------AT-AP-P 122 (258)
Q Consensus 66 -~~----~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~-~-~-~--------~~-~~-~ 122 (258)
.. .+..+..+..+|..+|..+|++++. .+++.+++|++.+||...+... . . . .. .. .
T Consensus 138 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 217 (352)
T PLN02240 138 QPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVG 217 (352)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhC
Confidence 11 1122334556777899999999863 3688999999888885322100 0 0 0 00 00 1
Q ss_pred -CCceEecc------CCCceeeeeccchHHHHHHHHhcCC----CCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054 123 -RENILFYG------DGQPKAIFNKEEDIATYTIKAVDDP----RTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI 191 (258)
Q Consensus 123 -~~~~~~~g------~g~~~~~~v~~~D~a~~~~~~l~~~----~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~ 191 (258)
...+.++| +|.+.++|||++|+|++++.++... ...++.||+++ ++.+|++|+++.+.+.+|.+.++.
T Consensus 218 ~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~-~~~~s~~el~~~i~~~~g~~~~~~ 296 (352)
T PLN02240 218 RRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGT-GKGTSVLEMVAAFEKASGKKIPLK 296 (352)
T ss_pred CCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccC-CCcEeHHHHHHHHHHHhCCCCCce
Confidence 11344444 6788999999999999998887642 23468999987 469999999999999999877665
Q ss_pred ecC
Q 025054 192 YVT 194 (258)
Q Consensus 192 ~~~ 194 (258)
..+
T Consensus 297 ~~~ 299 (352)
T PLN02240 297 LAP 299 (352)
T ss_pred eCC
Confidence 543
No 34
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.73 E-value=1.2e-16 Score=134.20 Aligned_cols=186 Identities=18% Similarity=0.205 Sum_probs=132.8
Q ss_pred CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CC---CCCCC
Q 025054 5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGSNV 67 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~~~ 67 (258)
.+++++.+|++|.+++.++++++|+|||+++... +.+..+++++|++++ ++++|+ |+ ++...
T Consensus 43 ~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~ 121 (328)
T TIGR03466 43 LDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVRG 121 (328)
T ss_pred CCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcCC
Confidence 4788999999999999999999999999986421 567789999999998 999998 65 33211
Q ss_pred -----CCCCCCCC---CccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCC--CCCCCCceEeccCCC
Q 025054 68 -----DAGHPIEP---AKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGA--TAPPRENILFYGDGQ 133 (258)
Q Consensus 68 -----~~~~~~~~---~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~g~ 133 (258)
++..+..+ ..+|..+|..+|+.+++ .+++++++||+.+||.........+. .....+...... +
T Consensus 122 ~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~--~ 199 (328)
T TIGR03466 122 DGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYV--D 199 (328)
T ss_pred CCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceee--C
Confidence 11111111 23566799999988875 58999999999999975332111000 000011122222 2
Q ss_pred ceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHH
Q 025054 134 PKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTED 196 (258)
Q Consensus 134 ~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~ 196 (258)
...+++|++|+|+++..+++.+. .++.|+++ ++.+|++|+++.+.+.+|++.....+|..
T Consensus 200 ~~~~~i~v~D~a~a~~~~~~~~~-~~~~~~~~--~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 259 (328)
T TIGR03466 200 TGLNLVHVDDVAEGHLLALERGR-IGERYILG--GENLTLKQILDKLAEITGRPAPRVKLPRW 259 (328)
T ss_pred CCcceEEHHHHHHHHHHHHhCCC-CCceEEec--CCCcCHHHHHHHHHHHhCCCCCCCcCCHH
Confidence 34679999999999999998753 56777775 46899999999999999988777777754
No 35
>PLN02996 fatty acyl-CoA reductase
Probab=99.73 E-value=2.7e-16 Score=138.19 Aligned_cols=179 Identities=14% Similarity=0.114 Sum_probs=132.7
Q ss_pred CceeEEeccCC-------CHHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCC-
Q 025054 5 INCLIAQGDLH-------DHESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEY- 63 (258)
Q Consensus 5 ~gv~~~~~D~~-------d~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~- 63 (258)
..++++.||+. |.+.+.++++++|+|||+++... +.++.+++++|++++++++||+ |+.
T Consensus 84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~ 163 (491)
T PLN02996 84 EKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY 163 (491)
T ss_pred cCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeE
Confidence 56899999997 55567788899999999998532 6788999999998633999998 652
Q ss_pred --CCCCC---C-C-C--------------------------------------------------CCCCCccchhhHHHH
Q 025054 64 --GSNVD---A-G-H--------------------------------------------------PIEPAKSGYARKAKI 86 (258)
Q Consensus 64 --~~~~~---~-~-~--------------------------------------------------~~~~~~~~~~~k~~~ 86 (258)
|.... + . . ...++++|..+|+.+
T Consensus 164 vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~a 243 (491)
T PLN02996 164 VCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMG 243 (491)
T ss_pred EecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHH
Confidence 32110 0 0 0 011245678899999
Q ss_pred HHHHHh--CCCCeEEEecCcccccCcCCCCCCCCCC-----------CCCCc-eEeccCCCceeeeeccchHHHHHHHHh
Q 025054 87 RRAIEA--EGIPHTYVSCNCSFGFFLPTMAQPGATA-----------PPREN-ILFYGDGQPKAIFNKEEDIATYTIKAV 152 (258)
Q Consensus 87 e~~l~~--~~~~~t~lr~~~~~~~~~~~~~~~~~~~-----------~~~~~-~~~~g~g~~~~~~v~~~D~a~~~~~~l 152 (258)
|+++++ .+++++++||+.++|..-..+ +++.. ...+. ..++|+|++.+++|+++|+++++..++
T Consensus 244 E~lv~~~~~~lpv~i~RP~~V~G~~~~p~--~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~ 321 (491)
T PLN02996 244 EMLLGNFKENLPLVIIRPTMITSTYKEPF--PGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAM 321 (491)
T ss_pred HHHHHHhcCCCCEEEECCCEeccCCcCCC--CCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHH
Confidence 999987 589999999999999654322 12210 12233 357899999999999999999999988
Q ss_pred cCC--C-CCCceEEEcCCC--CccCHHHHHHHHHHHhCC
Q 025054 153 DDP--R-TLNKTLYLRPPK--NIYSFKELVALWEKKIGK 186 (258)
Q Consensus 153 ~~~--~-~~~~~~~l~g~~--~~~t~~e~~~~~~~~~g~ 186 (258)
... . ..+++||+++ + ..+|+.|+++.+.+..+.
T Consensus 322 ~~~~~~~~~~~vYNi~s-~~~~~~s~~ei~~~~~~~~~~ 359 (491)
T PLN02996 322 AAHAGGQGSEIIYHVGS-SLKNPVKFSNLHDFAYRYFSK 359 (491)
T ss_pred HHhhccCCCCcEEEecC-CCCCcccHHHHHHHHHHHhhh
Confidence 753 1 2467899985 4 689999999999998874
No 36
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.72 E-value=1.3e-16 Score=132.23 Aligned_cols=171 Identities=16% Similarity=0.169 Sum_probs=120.7
Q ss_pred eccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CCCC---
Q 025054 11 QGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGSN--- 66 (258)
Q Consensus 11 ~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~~--- 66 (258)
.+|++|.+.+.++++ ++|+|||+++... +.++.+++++|++.| + ++|+ |+ |+..
T Consensus 37 ~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~Vy~~~~~~ 114 (299)
T PRK09987 37 CGDFSNPEGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG-A-WVVHYSTDYVFPGTGDI 114 (299)
T ss_pred cCCCCCHHHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEccceEECCCCCC
Confidence 579999999999998 5899999997532 456789999999999 6 5777 65 3221
Q ss_pred -CCCCCCCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCC-CCCCCCCCCceEeccC--CCceeeeeccc
Q 025054 67 -VDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQ-PGATAPPRENILFYGD--GQPKAIFNKEE 142 (258)
Q Consensus 67 -~~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~--g~~~~~~v~~~ 142 (258)
..+..+..|.++|..+|..+|++++....+++++|++++||+....+.. +......++.+.++++ |+....+...+
T Consensus 115 p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d 194 (299)
T PRK09987 115 PWQETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLAD 194 (299)
T ss_pred CcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHH
Confidence 1122233466778889999999999877789999999999964322110 0001122345777776 55444455566
Q ss_pred hHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054 143 DIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG 185 (258)
Q Consensus 143 D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g 185 (258)
|+++++..++..+. .+++||++++ +.+|+.|+++.+.+..+
T Consensus 195 ~~~~~~~~~~~~~~-~~giyni~~~-~~~s~~e~~~~i~~~~~ 235 (299)
T PRK09987 195 CTAHAIRVALNKPE-VAGLYHLVAS-GTTTWHDYAALVFEEAR 235 (299)
T ss_pred HHHHHHHHhhccCC-CCCeEEeeCC-CCccHHHHHHHHHHHHH
Confidence 67777777765543 3469999984 68999999999988643
No 37
>PRK05865 hypothetical protein; Provisional
Probab=99.72 E-value=9.4e-17 Score=146.99 Aligned_cols=154 Identities=16% Similarity=0.215 Sum_probs=122.8
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCCcc
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKS 78 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~ 78 (258)
+++++.+|++|.+++.++++++|+|||+++... +.++.+++++|+++| +++||+ |+..
T Consensus 41 ~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~-------------- 105 (854)
T PRK05865 41 SADFIAADIRDATAVESAMTGADVVAHCAWVRGRNDHINIDGTANVLKAMAETG-TGRIVFTSSGH-------------- 105 (854)
T ss_pred CceEEEeeCCCHHHHHHHHhCCCEEEECCCcccchHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH--------------
Confidence 578899999999999999999999999997532 677899999999999 999998 6531
Q ss_pred chhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCC
Q 025054 79 GYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTL 158 (258)
Q Consensus 79 ~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~ 158 (258)
|..+|+++++.+++++++||+++||...+.+... .....+...|+++..++|||++|+++++..++..+...
T Consensus 106 ----K~aaE~ll~~~gl~~vILRp~~VYGP~~~~~i~~----ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ 177 (854)
T PRK05865 106 ----QPRVEQMLADCGLEWVAVRCALIFGRNVDNWVQR----LFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVID 177 (854)
T ss_pred ----HHHHHHHHHHcCCCEEEEEeceEeCCChHHHHHH----HhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcC
Confidence 8899999999999999999999999753321110 00111222345566789999999999999998765446
Q ss_pred CceEEEcCCCCccCHHHHHHHHHHH
Q 025054 159 NKTLYLRPPKNIYSFKELVALWEKK 183 (258)
Q Consensus 159 ~~~~~l~g~~~~~t~~e~~~~~~~~ 183 (258)
++.||++++ +.+|++|+++.+.+.
T Consensus 178 ggvyNIgsg-~~~Si~EIae~l~~~ 201 (854)
T PRK05865 178 SGPVNLAAP-GELTFRRIAAALGRP 201 (854)
T ss_pred CCeEEEECC-CcccHHHHHHHHhhh
Confidence 789999984 589999999998874
No 38
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.72 E-value=1.2e-16 Score=133.83 Aligned_cols=174 Identities=14% Similarity=0.144 Sum_probs=123.8
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--------------hhchHHHHHHHHHh-CCccEEEc-CCCC-----
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--------------VEDQFKLIAAIKEV-GNIKRFFP-TEYG----- 64 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~-g~vk~~v~-S~~~----- 64 (258)
+++++.+|+.|++.+.++++++|+|||+++... +.++.+++++|++. + ++|||+ |+.+
T Consensus 56 ~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y~ 134 (322)
T PLN02662 56 RLHLFKANLLEEGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAYN 134 (322)
T ss_pred ceEEEeccccCcchHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcCC
Confidence 578999999999999999999999999997421 56788999999987 7 999998 6532
Q ss_pred CCC-------CCCCCCCC------CccchhhHHHHHHHHH----hCCCCeEEEecCcccccCcCCCCCC--CC-CCCCCC
Q 025054 65 SNV-------DAGHPIEP------AKSGYARKAKIRRAIE----AEGIPHTYVSCNCSFGFFLPTMAQP--GA-TAPPRE 124 (258)
Q Consensus 65 ~~~-------~~~~~~~~------~~~~~~~k~~~e~~l~----~~~~~~t~lr~~~~~~~~~~~~~~~--~~-~~~~~~ 124 (258)
... ++..+..| ..+|..+|..+|++++ +.+++++++||+.+||+........ .. .....+
T Consensus 135 ~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~ 214 (322)
T PLN02662 135 GKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLING 214 (322)
T ss_pred CcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcC
Confidence 111 00000111 1356679999998875 3689999999999999764321000 00 000001
Q ss_pred ceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK 186 (258)
Q Consensus 125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~ 186 (258)
. ... +++.++|+|++|+|+++..+++.+.. ++.|++.| +.+|++|+++.+.+.++.
T Consensus 215 ~-~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~~g--~~~s~~e~~~~i~~~~~~ 270 (322)
T PLN02662 215 A-QTF--PNASYRWVDVRDVANAHIQAFEIPSA-SGRYCLVE--RVVHYSEVVKILHELYPT 270 (322)
T ss_pred C-ccC--CCCCcCeEEHHHHHHHHHHHhcCcCc-CCcEEEeC--CCCCHHHHHHHHHHHCCC
Confidence 1 111 34678999999999999999987643 44688874 589999999999998763
No 39
>PLN02650 dihydroflavonol-4-reductase
Probab=99.72 E-value=2.2e-16 Score=134.00 Aligned_cols=176 Identities=15% Similarity=0.159 Sum_probs=122.0
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--------------hhchHHHHHHHHHhCCccEEEc-CCCCCCC---
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNV--- 67 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~--- 67 (258)
.++++.+|+.|.+.+.++++++|+|||+++... +.++.+++++|++.+++++||+ |+.+...
T Consensus 57 ~~~~v~~Dl~d~~~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~ 136 (351)
T PLN02650 57 RLTLWKADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEE 136 (351)
T ss_pred ceEEEEecCCChhhHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCC
Confidence 367899999999999999999999999997421 4577899999998765789998 6643211
Q ss_pred ------CCCC---------CCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCCC---CCCCCc
Q 025054 68 ------DAGH---------PIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGAT---APPREN 125 (258)
Q Consensus 68 ------~~~~---------~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~~---~~~~~~ 125 (258)
++.. ...+..+|..+|..+|.+++. .+++++++||+.+||+........... ....+.
T Consensus 137 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~ 216 (351)
T PLN02650 137 HQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGN 216 (351)
T ss_pred CCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCC
Confidence 1100 001224677899999987754 589999999999999764321111100 000011
Q ss_pred eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG 185 (258)
Q Consensus 126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g 185 (258)
...++. ...++|+|++|+++++..+++.+. .++.| +++ +..+|++|+++.+.+.++
T Consensus 217 ~~~~~~-~~~r~~v~V~Dva~a~~~~l~~~~-~~~~~-i~~-~~~~s~~el~~~i~~~~~ 272 (351)
T PLN02650 217 EAHYSI-IKQGQFVHLDDLCNAHIFLFEHPA-AEGRY-ICS-SHDATIHDLAKMLREKYP 272 (351)
T ss_pred ccccCc-CCCcceeeHHHHHHHHHHHhcCcC-cCceE-Eec-CCCcCHHHHHHHHHHhCc
Confidence 111222 234789999999999999998764 33466 444 458999999999999876
No 40
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.72 E-value=1.4e-16 Score=122.79 Aligned_cols=138 Identities=25% Similarity=0.284 Sum_probs=108.1
Q ss_pred cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCC-----CCC
Q 025054 4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHP-----IEP 75 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~-----~~~ 75 (258)
..+++++.+|+.|++++.++++|+|+||++++... ....++++++++++| ++|+|+ |+.+........ .+.
T Consensus 38 ~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~~ 116 (183)
T PF13460_consen 38 SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSDEDKPI 116 (183)
T ss_dssp CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEGGTCGG
T ss_pred ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccccccccccccccc-cccceeeeccccCCCCCcccccccccc
Confidence 36899999999999999999999999999998643 677899999999999 999998 877765432210 001
Q ss_pred CccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcC
Q 025054 76 AKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDD 154 (258)
Q Consensus 76 ~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~ 154 (258)
...|+..|..+|+.+++++++||++||+++|++.... ..+ +...+....++|+.+|+|++++.++++
T Consensus 117 ~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~~~~-----------~~~-~~~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 117 FPEYARDKREAEEALRESGLNWTIVRPGWIYGNPSRS-----------YRL-IKEGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp GHHHHHHHHHHHHHHHHSTSEEEEEEESEEEBTTSSS-----------EEE-ESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred hhhhHHHHHHHHHHHHhcCCCEEEEECcEeEeCCCcc-----------eeE-EeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 1256778999999999999999999999999985221 011 111345667999999999999998864
No 41
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.71 E-value=1.9e-16 Score=132.25 Aligned_cols=179 Identities=12% Similarity=0.090 Sum_probs=126.6
Q ss_pred eEEeccCCCHHHHHHhh----CCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CCCCCC---
Q 025054 8 LIAQGDLHDHESLVKAI----KPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN--- 66 (258)
Q Consensus 8 ~~~~~D~~d~~~l~~al----~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~--- 66 (258)
..+.+|+++.+.+..+. .++|+|||+++... +.++.+++++|++.+ + +||+ |+.+..
T Consensus 44 ~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~ 121 (314)
T TIGR02197 44 LVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDG 121 (314)
T ss_pred eeeeccCcchhHHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCC
Confidence 45667888877777665 48999999997531 567899999999998 7 6887 653221
Q ss_pred CC---C-CCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCC-C----C--CCCCCCceEe-
Q 025054 67 VD---A-GHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQP-G----A--TAPPRENILF- 128 (258)
Q Consensus 67 ~~---~-~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~-~----~--~~~~~~~~~~- 128 (258)
.. + .....|.++|..+|..+|.++++ .+++++++|++.+||......... . + ....+..+.+
T Consensus 122 ~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (314)
T TIGR02197 122 EAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLF 201 (314)
T ss_pred CCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEe
Confidence 11 1 11122456677799999998864 257899999999999653210000 0 0 0011222333
Q ss_pred -----ccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054 129 -----YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI 191 (258)
Q Consensus 129 -----~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~ 191 (258)
+++|++.++++|++|+++++..++... .+++||++++ +.+|++|+++.+.+.+|.+.++.
T Consensus 202 ~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~~--~~~~yni~~~-~~~s~~e~~~~i~~~~g~~~~~~ 266 (314)
T TIGR02197 202 KSSEGFKDGEQLRDFVYVKDVVDVNLWLLENG--VSGIFNLGTG-RARSFNDLADAVFKALGKDEKIE 266 (314)
T ss_pred cCccccCCCCceeeeEEHHHHHHHHHHHHhcc--cCceEEcCCC-CCccHHHHHHHHHHHhCCCCcce
Confidence 356788899999999999999999873 6779999985 69999999999999999765433
No 42
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.71 E-value=2e-16 Score=133.53 Aligned_cols=178 Identities=17% Similarity=0.126 Sum_probs=123.1
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc--------------hhchHHHHHHHHHhCCccEEEc-CCCCC---CC
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE--------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS---NV 67 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--------------~~~~~~li~aa~~~g~vk~~v~-S~~~~---~~ 67 (258)
+++++.+|++|.+++.++++++|+|||+++... +.+..+++++|.+.+++++||+ |+... ..
T Consensus 60 ~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~ 139 (338)
T PLN00198 60 DLKIFGADLTDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINK 139 (338)
T ss_pred ceEEEEcCCCChHHHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccC
Confidence 478999999999999999999999999997421 4567889999988633899998 65321 10
Q ss_pred --------CCC---------CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCC-CCC-C-C-CCC
Q 025054 68 --------DAG---------HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMA-QPG-A-T-APP 122 (258)
Q Consensus 68 --------~~~---------~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~-~~~-~-~-~~~ 122 (258)
.+. ...+|..+|..+|..+|.+++. .+++++++||+.+||+...... ... . . ...
T Consensus 140 ~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~ 219 (338)
T PLN00198 140 LSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLIT 219 (338)
T ss_pred CCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHc
Confidence 000 0123455688899999987764 5899999999999997642110 000 0 0 011
Q ss_pred CCceEecc-CCC----ceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054 123 RENILFYG-DGQ----PKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK 186 (258)
Q Consensus 123 ~~~~~~~g-~g~----~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~ 186 (258)
...+.+.| ++. ..++|+|++|++++++.+++.+. .++.|+.+ +..+|++|+++.+.+.++.
T Consensus 220 ~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~-~~~~~~~~--~~~~s~~el~~~i~~~~~~ 285 (338)
T PLN00198 220 GNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKES-ASGRYICC--AANTSVPELAKFLIKRYPQ 285 (338)
T ss_pred CCccccccccccccccCCcceeEHHHHHHHHHHHhhCcC-cCCcEEEe--cCCCCHHHHHHHHHHHCCC
Confidence 12233333 222 23699999999999999988753 33456544 3578999999999998763
No 43
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.71 E-value=1.4e-17 Score=133.28 Aligned_cols=159 Identities=26% Similarity=0.331 Sum_probs=122.6
Q ss_pred ceeEEeccCCCHHHHHHhhCCC--cEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCC---C
Q 025054 6 NCLIAQGDLHDHESLVKAIKPV--DVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEY---G 64 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~--d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~---~ 64 (258)
+++++.+|+.|.+.+.+++++. |+|||+++... +...++++++|++.+ +++||+ |+. +
T Consensus 43 ~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~ 121 (236)
T PF01370_consen 43 NVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYG 121 (236)
T ss_dssp TEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGT
T ss_pred eEEEEEeeccccccccccccccCceEEEEeecccccccccccccccccccccccccccccccccc-cccccccccccccc
Confidence 7889999999999999999976 99999998630 678899999999999 899997 543 3
Q ss_pred CCC----CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCC------CCCCCCceEecc
Q 025054 65 SNV----DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGA------TAPPRENILFYG 130 (258)
Q Consensus 65 ~~~----~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g 130 (258)
... ++..+..+..+|..+|...|+++++ .+++++++||+.+||+.......... .....+++.+++
T Consensus 122 ~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (236)
T PF01370_consen 122 DPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPG 201 (236)
T ss_dssp SSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEES
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccC
Confidence 221 1122223556777899999999875 48999999999999987110000000 012234588899
Q ss_pred CCCceeeeeccchHHHHHHHHhcCCCCCCceEEEc
Q 025054 131 DGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLR 165 (258)
Q Consensus 131 ~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~ 165 (258)
+|++.++++|++|+|+++..+++++...++.||++
T Consensus 202 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yNig 236 (236)
T PF01370_consen 202 DGSQVRDFIHVDDLAEAIVAALENPKAAGGIYNIG 236 (236)
T ss_dssp TSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred CCCCccceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 99999999999999999999999986679999984
No 44
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.70 E-value=1.2e-15 Score=127.34 Aligned_cols=181 Identities=20% Similarity=0.225 Sum_probs=135.0
Q ss_pred ceeEEeccCCCHHHHHHhhCCC-cEEEEccCccc----------------hhchHHHHHHHHHhCCccEEEc-CCCCCCC
Q 025054 6 NCLIAQGDLHDHESLVKAIKPV-DVVISAVGRTE----------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNV 67 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~-d~Vi~~~~~~~----------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~ 67 (258)
+++++.+|++|.+.+.++++++ |+|||+++... +.++++++++|++++ ++++|+ |+.+...
T Consensus 43 ~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~ 121 (314)
T COG0451 43 GVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVY 121 (314)
T ss_pred ccceeeecccchHHHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceEC
Confidence 5788899999998888899988 99999997431 567899999999988 999998 5532111
Q ss_pred --------CCC-CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCC-CCCCC---C--CCCCC-ceE
Q 025054 68 --------DAG-HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTM-AQPGA---T--APPRE-NIL 127 (258)
Q Consensus 68 --------~~~-~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~-~~~~~---~--~~~~~-~~~ 127 (258)
.+. .+..|.++|..+|..+|+++++ .+++++++||+.+||...... ..... . ..... ...
T Consensus 122 ~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (314)
T COG0451 122 GDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIV 201 (314)
T ss_pred CCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcce
Confidence 111 1223334577799999999976 369999999999999664321 00000 0 11122 256
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCC-ccCHHHHHHHHHHHhCCccee
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKN-IYSFKELVALWEKKIGKTLEK 190 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~-~~t~~e~~~~~~~~~g~~~~~ 190 (258)
+.++++..+++++++|+++++..+++++... .|++++ +. .+|++|+++.+.+.+|.+...
T Consensus 202 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~--~~ni~~-~~~~~~~~e~~~~~~~~~~~~~~~ 262 (314)
T COG0451 202 IGGDGSQTRDFVYVDDVADALLLALENPDGG--VFNIGS-GTAEITVRELAEAVAEAVGSKAPL 262 (314)
T ss_pred EeCCCceeEeeEeHHHHHHHHHHHHhCCCCc--EEEeCC-CCCcEEHHHHHHHHHHHhCCCCcc
Confidence 6677888899999999999999999987433 889986 44 799999999999999987663
No 45
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.69 E-value=3.8e-16 Score=130.94 Aligned_cols=169 Identities=15% Similarity=0.143 Sum_probs=125.3
Q ss_pred CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCC
Q 025054 5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVD 68 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~ 68 (258)
.+++++.+|++|.+.+.++++++|+|||+++... +.++.+++++|++++ +++||+ |+...
T Consensus 53 ~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~~--- 128 (324)
T TIGR03589 53 PCLRFFIGDVRDKERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDKA--- 128 (324)
T ss_pred CcEEEEEccCCCHHHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCC---
Confidence 3588999999999999999999999999997521 457889999999999 999998 66422
Q ss_pred CCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC-ceEeccCCCceeeeec
Q 025054 69 AGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE-NILFYGDGQPKAIFNK 140 (258)
Q Consensus 69 ~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~g~~~~~~v~ 140 (258)
..|..+|..+|..+|.+++. .|++++++|||.++|+....+..+........ .+++. ++++.++|++
T Consensus 129 ----~~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~-~~~~~r~~i~ 203 (324)
T TIGR03589 129 ----ANPINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPIT-DPRMTRFWIT 203 (324)
T ss_pred ----CCCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeC-CCCceEeeEE
Confidence 12356788899999998753 58999999999999963211100000001121 24444 5778889999
Q ss_pred cchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054 141 EEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG 185 (258)
Q Consensus 141 ~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g 185 (258)
++|+++++..+++... .++.| +. .+..+|+.|+++.+.+..+
T Consensus 204 v~D~a~a~~~al~~~~-~~~~~-~~-~~~~~sv~el~~~i~~~~~ 245 (324)
T TIGR03589 204 LEQGVNFVLKSLERML-GGEIF-VP-KIPSMKITDLAEAMAPECP 245 (324)
T ss_pred HHHHHHHHHHHHhhCC-CCCEE-cc-CCCcEEHHHHHHHHHhhCC
Confidence 9999999999998642 35556 43 2557999999999999754
No 46
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.68 E-value=1e-15 Score=127.55 Aligned_cols=156 Identities=12% Similarity=0.050 Sum_probs=111.6
Q ss_pred CCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CC---CCCCC----CCCCCCCCCccchhhHH
Q 025054 26 PVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGSNV----DAGHPIEPAKSGYARKA 84 (258)
Q Consensus 26 g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~~~----~~~~~~~~~~~~~~~k~ 84 (258)
++|+|||+++... +.++.+++++|++.+ + +||+ |+ |+... ++..+..|.++|..+|.
T Consensus 68 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~ 145 (308)
T PRK11150 68 DIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKF 145 (308)
T ss_pred CccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHH
Confidence 6899999986311 566789999999998 7 4887 65 33221 11122345567888999
Q ss_pred HHHHHHHh----CCCCeEEEecCcccccCcCCCCC-CCC------CCCCCCceEec-cCCCceeeeeccchHHHHHHHHh
Q 025054 85 KIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ-PGA------TAPPRENILFY-GDGQPKAIFNKEEDIATYTIKAV 152 (258)
Q Consensus 85 ~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~-g~g~~~~~~v~~~D~a~~~~~~l 152 (258)
.+|+++++ .+++++++|++.+||........ ... ....++...++ |+++.+++|+|++|+++++..++
T Consensus 146 ~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~ 225 (308)
T PRK11150 146 LFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFW 225 (308)
T ss_pred HHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHH
Confidence 99988775 58999999999999975322100 000 01122223333 66678899999999999999988
Q ss_pred cCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054 153 DDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK 186 (258)
Q Consensus 153 ~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~ 186 (258)
+.. .++.||+++ +..+|+.|+++.+.+.+|.
T Consensus 226 ~~~--~~~~yni~~-~~~~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 226 ENG--VSGIFNCGT-GRAESFQAVADAVLAYHKK 256 (308)
T ss_pred hcC--CCCeEEcCC-CCceeHHHHHHHHHHHhCC
Confidence 764 467999987 5689999999999999985
No 47
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.67 E-value=1.1e-15 Score=122.44 Aligned_cols=174 Identities=18% Similarity=0.179 Sum_probs=131.4
Q ss_pred ccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CCC----C
Q 025054 12 GDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGS----N 66 (258)
Q Consensus 12 ~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~----~ 66 (258)
.|++|++.+.+.++. .|+|||+++... ..+..++++||.+.| .+ +|+ |+ |.. .
T Consensus 34 ~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g-a~-lVhiSTDyVFDG~~~~~ 111 (281)
T COG1091 34 LDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG-AR-LVHISTDYVFDGEKGGP 111 (281)
T ss_pred ccccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC-Ce-EEEeecceEecCCCCCC
Confidence 589999999999984 599999999764 567799999999999 54 555 64 221 1
Q ss_pred CCCCCCCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCC-CCCCCCceEeccCCCceeeeeccchHH
Q 025054 67 VDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGA-TAPPRENILFYGDGQPKAIFNKEEDIA 145 (258)
Q Consensus 67 ~~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~g~~~~~~v~~~D~a 145 (258)
..+.....|.+-|..+|...|+.+++.+-..+++|.+|+|+.....+..... ....++.+.+. .++..++++..|+|
T Consensus 112 Y~E~D~~~P~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv--~Dq~gsPt~~~dlA 189 (281)
T COG1091 112 YKETDTPNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVV--DDQYGSPTYTEDLA 189 (281)
T ss_pred CCCCCCCCChhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEE--CCeeeCCccHHHHH
Confidence 2233344566667779999999999999999999999999976543321111 11223345544 36888899999999
Q ss_pred HHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054 146 TYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI 191 (258)
Q Consensus 146 ~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~ 191 (258)
+++..++.... .+++|++.+.+ .+|+-|+++.+.+..|.+....
T Consensus 190 ~~i~~ll~~~~-~~~~yH~~~~g-~~Swydfa~~I~~~~~~~~~v~ 233 (281)
T COG1091 190 DAILELLEKEK-EGGVYHLVNSG-ECSWYEFAKAIFEEAGVDGEVI 233 (281)
T ss_pred HHHHHHHhccc-cCcEEEEeCCC-cccHHHHHHHHHHHhCCCcccc
Confidence 99999887653 44599999976 7999999999999999766444
No 48
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.67 E-value=3.3e-15 Score=126.19 Aligned_cols=178 Identities=13% Similarity=0.114 Sum_probs=128.6
Q ss_pred ceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCcc-----EEEc-CC
Q 025054 6 NCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIK-----RFFP-TE 62 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk-----~~v~-S~ 62 (258)
+++++.+|+.|.+++.+++++ +|+|||+++... +.++.+++++|++.+ ++ +||+ |+
T Consensus 61 ~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss 139 (340)
T PLN02653 61 RMKLHYGDLSDASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGS 139 (340)
T ss_pred ceEEEEecCCCHHHHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEecc
Confidence 478899999999999999984 699999998521 456799999999988 75 8887 54
Q ss_pred ---CCCCC---CCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCC-CCCCCC-----CCCCCCce
Q 025054 63 ---YGSNV---DAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPT-MAQPGA-----TAPPRENI 126 (258)
Q Consensus 63 ---~~~~~---~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~-~~~~~~-----~~~~~~~~ 126 (258)
||... .+..+..|.++|..+|..+|.+++. .++.++..|+...+++.... +..... ........
T Consensus 140 ~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~ 219 (340)
T PLN02653 140 SEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQK 219 (340)
T ss_pred HHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCC
Confidence 44321 1222334566788899999998854 47777777776666643211 100000 00012223
Q ss_pred -EeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCc
Q 025054 127 -LFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKT 187 (258)
Q Consensus 127 -~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~ 187 (258)
.+.|+|++.++|+|++|++++++.+++.+ .++.||+++ ++.+|++|+++.+.+.+|.+
T Consensus 220 ~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~--~~~~yni~~-g~~~s~~e~~~~i~~~~g~~ 278 (340)
T PLN02653 220 KLFLGNLDASRDWGFAGDYVEAMWLMLQQE--KPDDYVVAT-EESHTVEEFLEEAFGYVGLN 278 (340)
T ss_pred ceEeCCCcceecceeHHHHHHHHHHHHhcC--CCCcEEecC-CCceeHHHHHHHHHHHcCCC
Confidence 34588999999999999999999999865 357899986 56999999999999999964
No 49
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.67 E-value=1.3e-15 Score=127.93 Aligned_cols=175 Identities=15% Similarity=0.153 Sum_probs=123.4
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCCC---
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN--- 66 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~--- 66 (258)
+++++.+|++|.+++.++++++|+|||+++... +.++.+++++|.+..++++||+ |+....
T Consensus 57 ~~~~~~~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~ 136 (325)
T PLN02989 57 RLKLFKADLLDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAP 136 (325)
T ss_pred ceEEEeCCCCCchHHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecC
Confidence 578899999999999999999999999997421 4567899999988532889998 664221
Q ss_pred C---------CCCCCCCC------CccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCC--CC-CCCCC
Q 025054 67 V---------DAGHPIEP------AKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPG--AT-APPRE 124 (258)
Q Consensus 67 ~---------~~~~~~~~------~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~--~~-~~~~~ 124 (258)
. ++..+..| ..+|..+|..+|++++. .+++++++||+.+||+......... .. ....+
T Consensus 137 ~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~ 216 (325)
T PLN02989 137 ETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKG 216 (325)
T ss_pred CccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcC
Confidence 0 11111111 24577799999988864 5899999999999997643211000 00 00011
Q ss_pred ceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK 186 (258)
Q Consensus 125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~ 186 (258)
... .+ .+.++|+|++|+|++++.+++.+. .++.|+++| ..+|++|+++.+.+.++.
T Consensus 217 ~~~-~~--~~~r~~i~v~Dva~a~~~~l~~~~-~~~~~ni~~--~~~s~~ei~~~i~~~~~~ 272 (325)
T PLN02989 217 KNP-FN--TTHHRFVDVRDVALAHVKALETPS-ANGRYIIDG--PVVTIKDIENVLREFFPD 272 (325)
T ss_pred CCC-CC--CcCcCeeEHHHHHHHHHHHhcCcc-cCceEEEec--CCCCHHHHHHHHHHHCCC
Confidence 111 12 234689999999999999998764 356899964 489999999999999873
No 50
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.66 E-value=1.9e-15 Score=128.07 Aligned_cols=179 Identities=16% Similarity=0.134 Sum_probs=127.5
Q ss_pred ceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CC
Q 025054 6 NCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YG 64 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~ 64 (258)
.++++.+|++|.+++.+++++ +|+|||+++... +.+..+++++|++.+.++++|+ |+ |+
T Consensus 53 ~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg 132 (349)
T TIGR02622 53 KIEDHFGDIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYR 132 (349)
T ss_pred CceEEEccCCCHHHHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhC
Confidence 466789999999999999985 599999997421 4567899999987654789998 65 33
Q ss_pred CC-----CCCCCCCCCCccchhhHHHHHHHHHh-----------CCCCeEEEecCcccccCcCCCCC--CCC--CCCCCC
Q 025054 65 SN-----VDAGHPIEPAKSGYARKAKIRRAIEA-----------EGIPHTYVSCNCSFGFFLPTMAQ--PGA--TAPPRE 124 (258)
Q Consensus 65 ~~-----~~~~~~~~~~~~~~~~k~~~e~~l~~-----------~~~~~t~lr~~~~~~~~~~~~~~--~~~--~~~~~~ 124 (258)
.. ..+..+..|..+|..+|..+|.+++. .+++++++||+.+||+....... +.+ ....+.
T Consensus 133 ~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~ 212 (349)
T TIGR02622 133 NDEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNK 212 (349)
T ss_pred CCCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCC
Confidence 21 11122234567788899999988864 28999999999999964211000 000 012223
Q ss_pred ceEeccCCCceeeeeccchHHHHHHHHhcCC----CCCCceEEEcC-CCCccCHHHHHHHHHHHhC
Q 025054 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDP----RTLNKTLYLRP-PKNIYSFKELVALWEKKIG 185 (258)
Q Consensus 125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~----~~~~~~~~l~g-~~~~~t~~e~~~~~~~~~g 185 (258)
.+. .++|++.++|+|++|++++++.+++.. ...++.||+++ +++.+|..|+++.+.+.++
T Consensus 213 ~~~-~~~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~ 277 (349)
T TIGR02622 213 IVI-IRNPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWW 277 (349)
T ss_pred CeE-ECCCCcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhc
Confidence 344 456889999999999999999877642 12367999984 2368999999998888765
No 51
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.65 E-value=5.6e-15 Score=122.50 Aligned_cols=189 Identities=19% Similarity=0.181 Sum_probs=135.5
Q ss_pred cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCC--
Q 025054 4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS-- 65 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~-- 65 (258)
+..+++.++|+.|...+.++++|+ .|+|+++... +.++++++++|+++| |+++|+ |+.++
T Consensus 54 ~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf 131 (361)
T KOG1430|consen 54 SGRVTVILGDLLDANSISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVF 131 (361)
T ss_pred CCceeEEecchhhhhhhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEe
Confidence 456899999999999999999999 7666665321 788999999999999 999999 76432
Q ss_pred ------CCCCCCCCC--CCccchhhHHHHHHHHHhC----CCCeEEEecCcccccCcCCCCCCCCC-CCCCCceEeccCC
Q 025054 66 ------NVDAGHPIE--PAKSGYARKAKIRRAIEAE----GIPHTYVSCNCSFGFFLPTMAQPGAT-APPRENILFYGDG 132 (258)
Q Consensus 66 ------~~~~~~~~~--~~~~~~~~k~~~e~~l~~~----~~~~t~lr~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~g 132 (258)
+.++..+.+ ...+|..+|+.+|+++++. ++..|+|||..+||+.-+........ ....+.....|++
T Consensus 132 ~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~ 211 (361)
T KOG1430|consen 132 GGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDG 211 (361)
T ss_pred CCeecccCCCCCCCccccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeecc
Confidence 111111222 2246777999999999873 38899999999999876543211111 1122334556777
Q ss_pred CceeeeeccchHHHHHHHH---hc--CCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcce-eEecCH
Q 025054 133 QPKAIFNKEEDIATYTIKA---VD--DPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLE-KIYVTE 195 (258)
Q Consensus 133 ~~~~~~v~~~D~a~~~~~~---l~--~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~-~~~~~~ 195 (258)
+...++++.+.++-+.+.+ |. .+...|+.|+|+. +.....-+....+.+.+|...+ ....|.
T Consensus 212 ~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d-~~p~~~~~~~~~l~~~lg~~~~~~~~~p~ 279 (361)
T KOG1430|consen 212 ENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITD-DTPVRFFDFLSPLVKALGYCLPSSIKLPL 279 (361)
T ss_pred ccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeC-CCcchhhHHHHHHHHhcCCCCCceeecch
Confidence 7888899988887776653 23 2446799999996 5577777777799999998777 555554
No 52
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.65 E-value=3.1e-15 Score=127.29 Aligned_cols=195 Identities=15% Similarity=0.130 Sum_probs=136.1
Q ss_pred CceeEEeccCCC------HHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCC
Q 025054 5 INCLIAQGDLHD------HESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS 65 (258)
Q Consensus 5 ~gv~~~~~D~~d------~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~ 65 (258)
.+++++.+|+++ .+.+....+++|+|||+++... +.+..+++++|.+.+ +++|++ |+.+.
T Consensus 61 ~~v~~~~~D~~~~~~gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v 139 (367)
T TIGR01746 61 ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISV 139 (367)
T ss_pred CCEEEEeCCcCcccCCcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccc
Confidence 468999999874 3567777889999999987421 567889999999988 999998 76543
Q ss_pred CCCC-------CC-----CCCCCccchhhHHHHHHHHHh---CCCCeEEEecCcccccCcCCCCCC-CCC--CCCC-Cce
Q 025054 66 NVDA-------GH-----PIEPAKSGYARKAKIRRAIEA---EGIPHTYVSCNCSFGFFLPTMAQP-GAT--APPR-ENI 126 (258)
Q Consensus 66 ~~~~-------~~-----~~~~~~~~~~~k~~~e~~l~~---~~~~~t~lr~~~~~~~~~~~~~~~-~~~--~~~~-~~~ 126 (258)
.... .. ...+...|..+|..+|.++++ .|++++++|||.++|......... ... .... ...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~ 219 (367)
T TIGR01746 140 LAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLAL 219 (367)
T ss_pred cCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHh
Confidence 2110 00 011234677899999998875 489999999999998622211000 000 0000 001
Q ss_pred EeccCCC-ceeeeeccchHHHHHHHHhcCCCC--CCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHH
Q 025054 127 LFYGDGQ-PKAIFNKEEDIATYTIKAVDDPRT--LNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQ 203 (258)
Q Consensus 127 ~~~g~g~-~~~~~v~~~D~a~~~~~~l~~~~~--~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 203 (258)
..++++. ...++++++|++++++.++..+.. .++.|+++++ +.+|++|+++.+.+ +|.+++ .++.+++...+.
T Consensus 220 ~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~-~~~s~~e~~~~i~~-~g~~~~--~~~~~~w~~~~~ 295 (367)
T TIGR01746 220 GAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNP-EPVSLDEFLEWLER-AGYNLK--LVSFDEWLQRLE 295 (367)
T ss_pred CCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCC-CCCCHHHHHHHHHH-cCCCCC--cCCHHHHHHHHH
Confidence 1222223 367799999999999999877643 2789999986 59999999999999 888776 567777877765
Q ss_pred h
Q 025054 204 D 204 (258)
Q Consensus 204 ~ 204 (258)
.
T Consensus 296 ~ 296 (367)
T TIGR01746 296 D 296 (367)
T ss_pred H
Confidence 4
No 53
>PLN02583 cinnamoyl-CoA reductase
Probab=99.64 E-value=8.7e-15 Score=121.31 Aligned_cols=172 Identities=11% Similarity=0.061 Sum_probs=119.4
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCcc-------------chhchHHHHHHHHHhCCccEEEc-CCCCCC----C
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRT-------------EVEDQFKLIAAIKEVGNIKRFFP-TEYGSN----V 67 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~-------------~~~~~~~li~aa~~~g~vk~~v~-S~~~~~----~ 67 (258)
+++++.+|++|.+++.+++.++|.|+|+++.. ++.++.+++++|.+.++++|+|+ |+.++. .
T Consensus 58 ~~~~~~~Dl~d~~~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~ 137 (297)
T PLN02583 58 RLKVFDVDPLDYHSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDD 137 (297)
T ss_pred ceEEEEecCCCHHHHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccc
Confidence 58899999999999999999999999976431 15788999999988633899998 664321 0
Q ss_pred C--CCCCCC---C---------CccchhhHHHHHHHHH----hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054 68 D--AGHPIE---P---------AKSGYARKAKIRRAIE----AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY 129 (258)
Q Consensus 68 ~--~~~~~~---~---------~~~~~~~k~~~e~~l~----~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (258)
. ...... + ...|..+|..+|+++. +.++++++|||+.+||+........ . .+.....
T Consensus 138 ~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~----~-~~~~~~~ 212 (297)
T PLN02583 138 NISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPY----L-KGAAQMY 212 (297)
T ss_pred cCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhh----h-cCCcccC
Confidence 0 000000 0 0135569999999884 3689999999999999765321110 1 1112222
Q ss_pred cCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054 130 GDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK 186 (258)
Q Consensus 130 g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~ 186 (258)
++ ..+++||++|+|++++.+++.+...+ .|.+++ ++..+..++++++.+.+..
T Consensus 213 ~~--~~~~~v~V~Dva~a~~~al~~~~~~~-r~~~~~-~~~~~~~~~~~~~~~~~p~ 265 (297)
T PLN02583 213 EN--GVLVTVDVNFLVDAHIRAFEDVSSYG-RYLCFN-HIVNTEEDAVKLAQMLSPL 265 (297)
T ss_pred cc--cCcceEEHHHHHHHHHHHhcCcccCC-cEEEec-CCCccHHHHHHHHHHhCCC
Confidence 22 34679999999999999999875444 677775 3234467899999998763
No 54
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.61 E-value=3.8e-14 Score=120.36 Aligned_cols=177 Identities=16% Similarity=0.170 Sum_probs=120.5
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----------------------hhchHHHHHHHHHhCCccEEEc-CC
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----------------------VEDQFKLIAAIKEVGNIKRFFP-TE 62 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----------------------~~~~~~li~aa~~~g~vk~~v~-S~ 62 (258)
+++++.+|+.|.+.+.++++++|+|||+++... +.++.+++++|++++++++||+ |+
T Consensus 59 ~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS 138 (353)
T PLN02896 59 RLRLFRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSS 138 (353)
T ss_pred eEEEEECCCCCHHHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEec
Confidence 578999999999999999999999999997521 1456789999988744899998 65
Q ss_pred ---CCCCC---------CCC--CC-------CCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCC
Q 025054 63 ---YGSNV---------DAG--HP-------IEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPG 117 (258)
Q Consensus 63 ---~~~~~---------~~~--~~-------~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~ 117 (258)
++... ++. .+ .++..+|..+|..+|+++.. .+++++++|++.+||+...... +.
T Consensus 139 ~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~-~~ 217 (353)
T PLN02896 139 ISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSV-PS 217 (353)
T ss_pred hhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCC-Cc
Confidence 33111 010 00 01223677799999997754 5899999999999997543210 00
Q ss_pred CC----C-CCCCc--eEeccCCC---ceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054 118 AT----A-PPREN--ILFYGDGQ---PKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK 186 (258)
Q Consensus 118 ~~----~-~~~~~--~~~~g~g~---~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~ 186 (258)
.. . ..+.. ....+..+ ..++|+|++|+++++..++..+. .++.|+++ +..+|++|+++.+.+.++.
T Consensus 218 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~-~~~~~~~~--~~~~s~~el~~~i~~~~~~ 293 (353)
T PLN02896 218 SIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTK-AEGRYICC--VDSYDMSELINHLSKEYPC 293 (353)
T ss_pred hHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCC-cCccEEec--CCCCCHHHHHHHHHHhCCC
Confidence 00 0 00111 11111111 23689999999999999998653 34456554 4589999999999999873
No 55
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.61 E-value=4.4e-14 Score=114.29 Aligned_cols=165 Identities=22% Similarity=0.219 Sum_probs=115.2
Q ss_pred CceeEEeccCCC-HHHHHHhh-CCCcEEEEccCccc-----------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCC-
Q 025054 5 INCLIAQGDLHD-HESLVKAI-KPVDVVISAVGRTE-----------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDA- 69 (258)
Q Consensus 5 ~gv~~~~~D~~d-~~~l~~al-~g~d~Vi~~~~~~~-----------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~- 69 (258)
.+++++.+|++| .+.+.+++ .++|+||++++... ..+..++++++++.+ ++|+|+ |+.+.....
T Consensus 62 ~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~ 140 (251)
T PLN00141 62 PSLQIVRADVTEGSDKLVEAIGDDSDAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAM 140 (251)
T ss_pred CceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCc
Confidence 368999999998 57888888 69999999987531 235789999999999 999998 776432111
Q ss_pred CCCCCC-------CccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccc
Q 025054 70 GHPIEP-------AKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEE 142 (258)
Q Consensus 70 ~~~~~~-------~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~ 142 (258)
.....+ ...++..|..+|++++++++++++||||++++..... .+.+.........+++.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~------------~~~~~~~~~~~~~~i~~~ 208 (251)
T PLN00141 141 GQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTG------------NIVMEPEDTLYEGSISRD 208 (251)
T ss_pred ccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCc------------eEEECCCCccccCcccHH
Confidence 010001 1112346888999999999999999999988753210 111111111223579999
Q ss_pred hHHHHHHHHhcCCCCCCceEEEcC--CCCccCHHHHHHHHHH
Q 025054 143 DIATYTIKAVDDPRTLNKTLYLRP--PKNIYSFKELVALWEK 182 (258)
Q Consensus 143 D~a~~~~~~l~~~~~~~~~~~l~g--~~~~~t~~e~~~~~~~ 182 (258)
|+|++++.++.++...++++.+.+ +....|+++++..+++
T Consensus 209 dvA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 209 QVAEVAVEALLCPESSYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred HHHHHHHHHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 999999999988766677787775 2224788998887765
No 56
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.59 E-value=2.1e-15 Score=124.14 Aligned_cols=191 Identities=18% Similarity=0.141 Sum_probs=122.1
Q ss_pred cccCceeEE-----eccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEE
Q 025054 2 LYMINCLIA-----QGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFF 59 (258)
Q Consensus 2 l~~~gv~~~-----~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v 59 (258)
|...|.+++ ..|+.|.+.+.+.++ ..|+|||+++... +....+|+++|.+.| + ++|
T Consensus 20 l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~-~-~li 97 (286)
T PF04321_consen 20 LKERGYEVIATSRSDLDLTDPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG-A-RLI 97 (286)
T ss_dssp HTTTSEEEEEESTTCS-TTSHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT---EEE
T ss_pred HhhCCCEEEEeCchhcCCCCHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC-C-cEE
Confidence 344565565 567889999999887 4799999997642 577889999999999 6 555
Q ss_pred c-CC---CCCC----CCCCCCCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCC-CCCCCCceEecc
Q 025054 60 P-TE---YGSN----VDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGA-TAPPRENILFYG 130 (258)
Q Consensus 60 ~-S~---~~~~----~~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g 130 (258)
+ |+ |+.. ..+.....|.+.|..+|..+|+.+++..-.++|+|++++||.....+..... ....++.+.+..
T Consensus 98 ~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~ 177 (286)
T PF04321_consen 98 HISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAACPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFD 177 (286)
T ss_dssp EEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH-SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEES
T ss_pred EeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeC
Confidence 5 65 3222 1223334566778889999999999855599999999999973222111000 012234455553
Q ss_pred CCCceeeeeccchHHHHHHHHhcCCC---CCCceEEEcCCCCccCHHHHHHHHHHHhCCcc-eeEecCHHH
Q 025054 131 DGQPKAIFNKEEDIATYTIKAVDDPR---TLNKTLYLRPPKNIYSFKELVALWEKKIGKTL-EKIYVTEDQ 197 (258)
Q Consensus 131 ~g~~~~~~v~~~D~a~~~~~~l~~~~---~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~-~~~~~~~~~ 197 (258)
++.++++++.|+|+++..+++... ...++|+++|+ +.+|..|+++.+.+.+|.+. .+..++.++
T Consensus 178 --d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~-~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~ 245 (286)
T PF04321_consen 178 --DQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGP-ERVSRYEFAEAIAKILGLDPELIKPVSSSE 245 (286)
T ss_dssp --SCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---B-S-EEHHHHHHHHHHHHTHCTTEEEEESSTT
T ss_pred --CceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecC-cccCHHHHHHHHHHHhCCCCceEEeccccc
Confidence 678899999999999999998752 34689999996 48999999999999999876 666666543
No 57
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.58 E-value=4.4e-14 Score=116.63 Aligned_cols=176 Identities=15% Similarity=0.102 Sum_probs=116.2
Q ss_pred HHHHHhhCCCcEEEEccCccc-----------------hhchHHHHHHHHHhCCcc--EEEc-CC---CCCCCCCC-CCC
Q 025054 18 ESLVKAIKPVDVVISAVGRTE-----------------VEDQFKLIAAIKEVGNIK--RFFP-TE---YGSNVDAG-HPI 73 (258)
Q Consensus 18 ~~l~~al~g~d~Vi~~~~~~~-----------------~~~~~~li~aa~~~g~vk--~~v~-S~---~~~~~~~~-~~~ 73 (258)
..+.++++++|+|||+++... +.+.++++++|++++ ++ +||+ |+ ++...... ...
T Consensus 49 ~~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg~~~~~~~~E~ 127 (292)
T TIGR01777 49 LAESEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYGTSEDRVFTEE 127 (292)
T ss_pred cchhhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeCCCCCCCcCcc
Confidence 445677889999999997421 456889999999998 74 5666 44 23211110 000
Q ss_pred --CCCccch-hhHHHHHHHHH---hCCCCeEEEecCcccccCcCCCCCCC-CCCCCCCceEeccCCCceeeeeccchHHH
Q 025054 74 --EPAKSGY-ARKAKIRRAIE---AEGIPHTYVSCNCSFGFFLPTMAQPG-ATAPPRENILFYGDGQPKAIFNKEEDIAT 146 (258)
Q Consensus 74 --~~~~~~~-~~k~~~e~~l~---~~~~~~t~lr~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~g~~~~~~v~~~D~a~ 146 (258)
.....++ ..+...|+.++ +.+++++++||+.+||+......... ....... ..+|++++.+++++++|+|+
T Consensus 128 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~i~v~Dva~ 205 (292)
T TIGR01777 128 DSPAGDDFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLG--GPLGSGRQWFSWIHIEDLVQ 205 (292)
T ss_pred cCCCCCChHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcc--cccCCCCcccccEeHHHHHH
Confidence 1112233 34545555543 36899999999999997422110000 0000001 12577889999999999999
Q ss_pred HHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHH
Q 025054 147 YTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQIL 199 (258)
Q Consensus 147 ~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~ 199 (258)
++..+++.+. .++.|+++++ +.+|++|+++.+++.+|.+..+ .+|...+.
T Consensus 206 ~i~~~l~~~~-~~g~~~~~~~-~~~s~~di~~~i~~~~g~~~~~-~~p~~~~~ 255 (292)
T TIGR01777 206 LILFALENAS-ISGPVNATAP-EPVRNKEFAKALARALHRPAFF-PVPAFVLR 255 (292)
T ss_pred HHHHHhcCcc-cCCceEecCC-CccCHHHHHHHHHHHhCCCCcC-cCCHHHHH
Confidence 9999998764 4568999874 6999999999999999987543 47776544
No 58
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.58 E-value=1.4e-13 Score=112.56 Aligned_cols=189 Identities=20% Similarity=0.213 Sum_probs=144.0
Q ss_pred CceeEEeccCCCHHHHHHhhCCCcEEEEccCcc------chhchHHHHHHHHHhC-CccEEEc-CCCCCCCCCCCCCCCC
Q 025054 5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRT------EVEDQFKLIAAIKEVG-NIKRFFP-TEYGSNVDAGHPIEPA 76 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~------~~~~~~~li~aa~~~g-~vk~~v~-S~~~~~~~~~~~~~~~ 76 (258)
.+++++.+|+.++.++..+++|++.++++.+.. ......++++++++++ .+++++. |.++.+.. ..
T Consensus 42 ~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~------~~ 115 (275)
T COG0702 42 GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAA------SP 115 (275)
T ss_pred CCcEEEEeccCCHhHHHHHhccccEEEEEecccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCC------Cc
Confidence 679999999999999999999999998887732 1344566667776643 2889998 88877653 24
Q ss_pred ccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054 77 KSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR 156 (258)
Q Consensus 77 ~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~ 156 (258)
..|...|..+|+.++++++++|++|+..+|......+... ......++...+..+.++++.+|++.+++.++..+.
T Consensus 116 ~~~~~~~~~~e~~l~~sg~~~t~lr~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~ 191 (275)
T COG0702 116 SALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGAAFIEA----AEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA 191 (275)
T ss_pred cHHHHHHHHHHHHHHhcCCCeEEEecCeeeeccchhHHHH----HHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc
Confidence 5788899999999999999999999877776544331100 011111222223338899999999999999999887
Q ss_pred CCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHh
Q 025054 157 TLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQD 204 (258)
Q Consensus 157 ~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 204 (258)
..++.|.+.|| +..|..++++.+.+..|++..+...+..........
T Consensus 192 ~~~~~~~l~g~-~~~~~~~~~~~l~~~~gr~~~~~~~~~~~~~~~~~~ 238 (275)
T COG0702 192 TAGRTYELAGP-EALTLAELASGLDYTIGRPVGLIPEALAALTLALSG 238 (275)
T ss_pred ccCcEEEccCC-ceecHHHHHHHHHHHhCCcceeeCCcHHHHHHHhcc
Confidence 78999999998 599999999999999999999977776555444433
No 59
>PLN02778 3,5-epimerase/4-reductase
Probab=99.55 E-value=1.4e-13 Score=114.07 Aligned_cols=184 Identities=14% Similarity=0.095 Sum_probs=122.5
Q ss_pred cccCceeE--EeccCCCHHHHHHhhC--CCcEEEEccCccc------------------hhchHHHHHHHHHhCCccEEE
Q 025054 2 LYMINCLI--AQGDLHDHESLVKAIK--PVDVVISAVGRTE------------------VEDQFKLIAAIKEVGNIKRFF 59 (258)
Q Consensus 2 l~~~gv~~--~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~------------------~~~~~~li~aa~~~g~vk~~v 59 (258)
|.+.|.++ ..+|++|.+.+...++ ++|+|||+++... +.++.+++++|++.| +++++
T Consensus 29 L~~~g~~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~~v~ 107 (298)
T PLN02778 29 CQEQGIDFHYGSGRLENRASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LVLTN 107 (298)
T ss_pred HHhCCCEEEEecCccCCHHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence 44556555 4578888888888887 6899999997420 557889999999999 99877
Q ss_pred cCC---CCCCC----------CCCC-CCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054 60 PTE---YGSNV----------DAGH-PIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN 125 (258)
Q Consensus 60 ~S~---~~~~~----------~~~~-~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~ 125 (258)
+|+ |+... .+.. +.++.++|..+|..+|.+++... +...+|++..++.-......+.........
T Consensus 108 ~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~ 186 (298)
T PLN02778 108 YATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE-NVCTLRVRMPISSDLSNPRNFITKITRYEK 186 (298)
T ss_pred EecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhh-ccEEeeecccCCcccccHHHHHHHHHcCCC
Confidence 743 33211 1111 12233567789999999998743 567888876555321110000000111222
Q ss_pred eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCH
Q 025054 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTE 195 (258)
Q Consensus 126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~ 195 (258)
+...+ .++++++|+++++..++... .++.||++++ +.+|+.|+++.+.+.+|...++..+..
T Consensus 187 ~~~~~-----~s~~yv~D~v~al~~~l~~~--~~g~yNigs~-~~iS~~el~~~i~~~~~~~~~~~~~~i 248 (298)
T PLN02778 187 VVNIP-----NSMTILDELLPISIEMAKRN--LTGIYNFTNP-GVVSHNEILEMYRDYIDPSFTWKNFTL 248 (298)
T ss_pred eeEcC-----CCCEEHHHHHHHHHHHHhCC--CCCeEEeCCC-CcccHHHHHHHHHHHhCCCceeccccH
Confidence 22322 26899999999999998754 3469999874 599999999999999997665544443
No 60
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.54 E-value=1.9e-13 Score=119.82 Aligned_cols=168 Identities=17% Similarity=0.113 Sum_probs=116.9
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCC
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGH 71 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~ 71 (258)
+++++.+|+.|.+++.++|.++|+|||+++... +.+.++++++|+++| ++|||+ |+.+.......
T Consensus 139 ~v~iV~gDLtD~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g~p 217 (576)
T PLN03209 139 KLEIVECDLEKPDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVGFP 217 (576)
T ss_pred ceEEEEecCCCHHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccCcc
Confidence 478999999999999999999999999987531 356899999999999 999998 88765321110
Q ss_pred --CCCCCccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHH
Q 025054 72 --PIEPAKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTI 149 (258)
Q Consensus 72 --~~~~~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~ 149 (258)
.......++..|..+|++|+++|++|++||||++.+...... ....+.....+......+..+|||++++
T Consensus 218 ~~~~~sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~--------~t~~v~~~~~d~~~gr~isreDVA~vVv 289 (576)
T PLN03209 218 AAILNLFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK--------ETHNLTLSEEDTLFGGQVSNLQVAELMA 289 (576)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc--------cccceeeccccccCCCccCHHHHHHHHH
Confidence 011123455688999999999999999999998875422110 0111222111111123589999999999
Q ss_pred HHhcCCC-CCCceEEEcCCCCccCHHHHHHHHHHH
Q 025054 150 KAVDDPR-TLNKTLYLRPPKNIYSFKELVALWEKK 183 (258)
Q Consensus 150 ~~l~~~~-~~~~~~~l~g~~~~~t~~e~~~~~~~~ 183 (258)
.++.++. ..++++.+.+ +.......+.+++.++
T Consensus 290 fLasd~~as~~kvvevi~-~~~~p~~~~~~~~~~i 323 (576)
T PLN03209 290 CMAKNRRLSYCKVVEVIA-ETTAPLTPMEELLAKI 323 (576)
T ss_pred HHHcCchhccceEEEEEe-CCCCCCCCHHHHHHhc
Confidence 9999764 6789999885 3334445556666554
No 61
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.52 E-value=1.2e-12 Score=105.43 Aligned_cols=189 Identities=22% Similarity=0.216 Sum_probs=137.1
Q ss_pred cCceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---
Q 025054 4 MINCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE--- 62 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~--- 62 (258)
..++.++++|+.|.+.|++.|+ +.|.|+|+++... +.++.++++++++.+ ++.+|+ |+
T Consensus 53 ~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatv 131 (343)
T KOG1371|consen 53 GKSVFFVEGDLNDAEALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATV 131 (343)
T ss_pred CCceEEEEeccCCHHHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEecceee
Confidence 3679999999999999999998 5799999987532 678899999999999 999998 43
Q ss_pred CCCCC----CCCCCC-CCCccchhhHHHHHHHHHh----CCCCeEEEecCcccc--cCcC----CC-----CCCCCC--C
Q 025054 63 YGSNV----DAGHPI-EPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFG--FFLP----TM-----AQPGAT--A 120 (258)
Q Consensus 63 ~~~~~----~~~~~~-~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~--~~~~----~~-----~~~~~~--~ 120 (258)
||... ++..+. .|.++|..+|..+|+.+.. .++..+.||-...+| .+.. .+ ..+... .
T Consensus 132 YG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~va 211 (343)
T KOG1371|consen 132 YGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVA 211 (343)
T ss_pred ecCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchh
Confidence 33211 112222 3788999999999999876 357888899777776 2110 00 000000 0
Q ss_pred CC-CCceEe------ccCCCceeeeeccchHHHHHHHHhcCCCC--CCceEEEcCCCCccCHHHHHHHHHHHhCCcceeE
Q 025054 121 PP-RENILF------YGDGQPKAIFNKEEDIATYTIKAVDDPRT--LNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKI 191 (258)
Q Consensus 121 ~~-~~~~~~------~g~g~~~~~~v~~~D~a~~~~~~l~~~~~--~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~ 191 (258)
.. ...+.+ ..+|+..+.++++-|.|+....++...+. .-++||++. +...|..|+..++++.+|.++++.
T Consensus 212 igr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgt-g~g~~V~~lv~a~~k~~g~~~k~~ 290 (343)
T KOG1371|consen 212 IGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGT-GKGSSVLELVTAFEKALGVKIKKK 290 (343)
T ss_pred hcccccceeecCcccccCCCeeecceeeEehHHHHHHHhhccccchheeeEeecC-CCCccHHHHHHHHHHHhcCCCCcc
Confidence 00 011112 23568899999999999999999988642 334888875 668999999999999999988886
Q ss_pred ecC
Q 025054 192 YVT 194 (258)
Q Consensus 192 ~~~ 194 (258)
-++
T Consensus 291 ~v~ 293 (343)
T KOG1371|consen 291 VVP 293 (343)
T ss_pred ccC
Confidence 655
No 62
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.50 E-value=7.8e-13 Score=104.25 Aligned_cols=166 Identities=21% Similarity=0.281 Sum_probs=121.7
Q ss_pred HhhCCCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CC---CCCCCCCC---------CCC
Q 025054 22 KAIKPVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TE---YGSNVDAG---------HPI 73 (258)
Q Consensus 22 ~al~g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~---~~~~~~~~---------~~~ 73 (258)
..+.++|.|||+|++.. ..++.+.+-.|++.+ +||++ |+ ||.....+ .+.
T Consensus 87 pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVYgdp~~hpq~e~ywg~vnpi 164 (350)
T KOG1429|consen 87 PLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGDPLVHPQVETYWGNVNPI 164 (350)
T ss_pred HHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeecccccCCcccCCCccccccccCcC
Confidence 47789999999997632 567788888999988 78887 54 33311110 011
Q ss_pred CCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCC-----CCCCCCCCCceEeccCCCceeeeeccchH
Q 025054 74 EPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQ-----PGATAPPRENILFYGDGQPKAIFNKEEDI 144 (258)
Q Consensus 74 ~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~g~~~~~~v~~~D~ 144 (258)
.+..-|...|..+|.+..+ .|+.++|.|+-..||+....... +....+.+..+.++|+|.+.++|+++.|+
T Consensus 165 gpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~ 244 (350)
T KOG1429|consen 165 GPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDL 244 (350)
T ss_pred CchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHH
Confidence 1222344489999987754 68999999999999977643210 00012456689999999999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEe
Q 025054 145 ATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIY 192 (258)
Q Consensus 145 a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~ 192 (258)
.+++.++++++ ...-+||++|+ ..|+.|+|+.+.+..|....++.
T Consensus 245 Vegll~Lm~s~--~~~pvNiGnp~-e~Tm~elAemv~~~~~~~s~i~~ 289 (350)
T KOG1429|consen 245 VEGLLRLMESD--YRGPVNIGNPG-EFTMLELAEMVKELIGPVSEIEF 289 (350)
T ss_pred HHHHHHHhcCC--CcCCcccCCcc-ceeHHHHHHHHHHHcCCCcceee
Confidence 99999999987 44459999987 99999999999999865544433
No 63
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=99.46 E-value=2.3e-12 Score=98.38 Aligned_cols=217 Identities=17% Similarity=0.230 Sum_probs=145.0
Q ss_pred eccCCCHHHHHHhhC--CCcEEEEccCccc----------------hhchHHHHHHHHHhCCccEEEc--CC--------
Q 025054 11 QGDLHDHESLVKAIK--PVDVVISAVGRTE----------------VEDQFKLIAAIKEVGNIKRFFP--TE-------- 62 (258)
Q Consensus 11 ~~D~~d~~~l~~al~--g~d~Vi~~~~~~~----------------~~~~~~li~aa~~~g~vk~~v~--S~-------- 62 (258)
..|+++.++.++.|+ ....|||+++... +..+-|++..|-+.| |++++. |+
T Consensus 38 d~DLt~~a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIfPdkt~ 116 (315)
T KOG1431|consen 38 DADLTNLADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIFPDKTS 116 (315)
T ss_pred cccccchHHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhhhhcceeecCCCCC
Confidence 578889888888887 4678999987531 567789999999999 999886 43
Q ss_pred CCCCCCCC--CCCCCCccchh-hHHHHH----HHHHhCCCCeEEEecCcccccCcCCC---C--CCCCC-------CCCC
Q 025054 63 YGSNVDAG--HPIEPAKSGYA-RKAKIR----RAIEAEGIPHTYVSCNCSFGFFLPTM---A--QPGAT-------APPR 123 (258)
Q Consensus 63 ~~~~~~~~--~~~~~~~~~~~-~k~~~e----~~l~~~~~~~t~lr~~~~~~~~~~~~---~--~~~~~-------~~~~ 123 (258)
+..+.+.. .+..|.+..|. .|..+. .|-.+.|..+|.+-|..+||+--+.- . .++.+ .-..
T Consensus 117 yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gt 196 (315)
T KOG1431|consen 117 YPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGT 196 (315)
T ss_pred CCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCC
Confidence 22222111 11123333444 675553 34456899999999999998432211 1 11110 0122
Q ss_pred CceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHH
Q 025054 124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQ 203 (258)
Q Consensus 124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 203 (258)
..+.++|+|.-.+.|++.+|+|++.+.++.+-.....++.-.|..+++|++|+++++.++.|-.-+...-+..
T Consensus 197 d~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK------- 269 (315)
T KOG1431|consen 197 DELTVWGSGSPLRQFIYSDDLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTK------- 269 (315)
T ss_pred ceEEEecCCChHHHHhhHhHHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccC-------
Confidence 3688999999999999999999999999987543444444455556999999999999999876666554320
Q ss_pred hccCcchhhheeeeeEEEecCCccccCCCCCcccccccCCCCcccCHHHHHhh
Q 025054 204 DASNEDKIMLVVNFSIFMKGEQTNFEIDPSSGVEASELYPDVDYATVEEYLDQ 256 (258)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~s~ee~l~~ 256 (258)
..|. +....+ +.....++|+.+++.|++-+++
T Consensus 270 -----------------~DGq---~kKtas-nsKL~sl~pd~~ft~l~~ai~~ 301 (315)
T KOG1431|consen 270 -----------------SDGQ---FKKTAS-NSKLRSLLPDFKFTPLEQAISE 301 (315)
T ss_pred -----------------CCCC---cccccc-hHHHHHhCCCcccChHHHHHHH
Confidence 1221 111111 2356688999999999998875
No 64
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.44 E-value=1.7e-13 Score=110.64 Aligned_cols=168 Identities=15% Similarity=0.131 Sum_probs=113.2
Q ss_pred EEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCC
Q 025054 9 IAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAG 70 (258)
Q Consensus 9 ~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~ 70 (258)
.+.+|+.|.+.+.++|+ ++|+|||+|+... +.+++|++++|.++| |++||. |+-=+
T Consensus 58 ~vigDvrd~~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTDKA----- 131 (293)
T PF02719_consen 58 PVIGDVRDKERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFISTDKA----- 131 (293)
T ss_dssp --CTSCCHHHHHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGC-----
T ss_pred ceeecccCHHHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEcccccc-----
Confidence 45899999999999999 9999999998642 788999999999999 999999 65222
Q ss_pred CCCCCCccchhhHHHHHHHHHh----C---CCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccch
Q 025054 71 HPIEPAKSGYARKAKIRRAIEA----E---GIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEED 143 (258)
Q Consensus 71 ~~~~~~~~~~~~k~~~e~~l~~----~---~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D 143 (258)
.+|.+-+..+|..+|.++.+ . +..++++|.|.++|.-.+.+..+......++++++.. .+..+=|+++++
T Consensus 132 --v~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~-p~mtRffmti~E 208 (293)
T PF02719_consen 132 --VNPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTD-PDMTRFFMTIEE 208 (293)
T ss_dssp --SS--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECE-TT-EEEEE-HHH
T ss_pred --CCCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCC-CCcEEEEecHHH
Confidence 12567788899999999976 2 4689999999999844332211100012345677764 466677999999
Q ss_pred HHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCc
Q 025054 144 IATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKT 187 (258)
Q Consensus 144 ~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~ 187 (258)
.+..+..++.... .|++|.+-- +.++++.|+++.+-+..|..
T Consensus 209 Av~Lvl~a~~~~~-~geifvl~m-g~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 209 AVQLVLQAAALAK-GGEIFVLDM-GEPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp HHHHHHHHHHH---TTEEEEE----TCEECCCHHHHHHHHTT-E
T ss_pred HHHHHHHHHhhCC-CCcEEEecC-CCCcCHHHHHHHHHhhcccc
Confidence 9999999887642 466666643 46899999999999999853
No 65
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.43 E-value=2.5e-12 Score=110.83 Aligned_cols=188 Identities=14% Similarity=0.151 Sum_probs=139.5
Q ss_pred CceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCccEEEc-CCCCCC
Q 025054 5 INCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN 66 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~ 66 (258)
.....+.||+.|.+.+.+++++ +|+|||+|+... +-+++|+++||.++| |++||. |+-=+
T Consensus 302 ~~~~~~igdVrD~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTDKA- 379 (588)
T COG1086 302 LKLRFYIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLISTDKA- 379 (588)
T ss_pred cceEEEecccccHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEecCcc-
Confidence 3467889999999999999998 999999998632 788999999999999 999998 75322
Q ss_pred CCCCCCCCCCccchhhHHHHHHHHHh-----C--CCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeee
Q 025054 67 VDAGHPIEPAKSGYARKAKIRRAIEA-----E--GIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFN 139 (258)
Q Consensus 67 ~~~~~~~~~~~~~~~~k~~~e~~l~~-----~--~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v 139 (258)
.+|.+-+..+|..+|..+.+ + +..++.+|.|+++|.-.+.+..+.....+++++++. +++..+=|.
T Consensus 380 ------V~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvT-dp~mtRyfM 452 (588)
T COG1086 380 ------VNPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVT-DPDMTRFFM 452 (588)
T ss_pred ------cCCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCcccc-CCCceeEEE
Confidence 23577888999999999865 2 378999999999986554332111111234556665 456666699
Q ss_pred ccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC----Cc--ceeEec-CHHHHHHHHH
Q 025054 140 KEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG----KT--LEKIYV-TEDQILQMIQ 203 (258)
Q Consensus 140 ~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g----~~--~~~~~~-~~~~~~~~~~ 203 (258)
++.|.++.+..+....+ .|.+|.+-. |+++++.|+++.+-+..| .. ++++-+ |-|.+.+.+.
T Consensus 453 TI~EAv~LVlqA~a~~~-gGeifvldM-GepvkI~dLAk~mi~l~g~~~~~dI~I~~~GlRpGEKl~EeLl 521 (588)
T COG1086 453 TIPEAVQLVLQAGAIAK-GGEIFVLDM-GEPVKIIDLAKAMIELAGQTPPGDIAIKIIGLRPGEKLYEELL 521 (588)
T ss_pred EHHHHHHHHHHHHhhcC-CCcEEEEcC-CCCeEHHHHHHHHHHHhCCCCCCCCCeEEEecCCchhhhhhhc
Confidence 99999999999887752 555665543 579999999999999997 22 333333 4555655543
No 66
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.40 E-value=2.6e-11 Score=108.23 Aligned_cols=181 Identities=14% Similarity=0.139 Sum_probs=125.1
Q ss_pred CceeEEeccCCCH------HHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCC--
Q 025054 5 INCLIAQGDLHDH------ESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEY-- 63 (258)
Q Consensus 5 ~gv~~~~~D~~d~------~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~-- 63 (258)
..+.++.||++++ +.+..+.+++|+|||+++... +.++.+++++|++.+++++||+ |+.
T Consensus 192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayV 271 (605)
T PLN02503 192 SKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYV 271 (605)
T ss_pred ccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCcee
Confidence 3588899999986 456666678999999998632 6788999999998755899998 552
Q ss_pred -CCCC----CCCCC----------------------------------------------------------CCCCccch
Q 025054 64 -GSNV----DAGHP----------------------------------------------------------IEPAKSGY 80 (258)
Q Consensus 64 -~~~~----~~~~~----------------------------------------------------------~~~~~~~~ 80 (258)
|... +...+ ...++.|-
T Consensus 272 yG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt 351 (605)
T PLN02503 272 NGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYV 351 (605)
T ss_pred ecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHH
Confidence 2210 00000 11125566
Q ss_pred hhHHHHHHHHHh--CCCCeEEEecCcccccCcCCCC---------CCCCCCCCCCceE-eccCCCceeeeeccchHHHHH
Q 025054 81 ARKAKIRRAIEA--EGIPHTYVSCNCSFGFFLPTMA---------QPGATAPPRENIL-FYGDGQPKAIFNKEEDIATYT 148 (258)
Q Consensus 81 ~~k~~~e~~l~~--~~~~~t~lr~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~g~g~~~~~~v~~~D~a~~~ 148 (258)
.+|+.+|+.+++ .++|.+++||+.+...+-..+. .+.......+.+. ++++++...++|+++.++.++
T Consensus 352 ~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~ 431 (605)
T PLN02503 352 FTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNAT 431 (605)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHH
Confidence 699999999987 4799999999999542211110 0000111233333 678889999999999999999
Q ss_pred HHHhcC-C---CCCCceEEEcCC-CCccCHHHHHHHHHHHhC
Q 025054 149 IKAVDD-P---RTLNKTLYLRPP-KNIYSFKELVALWEKKIG 185 (258)
Q Consensus 149 ~~~l~~-~---~~~~~~~~l~g~-~~~~t~~e~~~~~~~~~g 185 (258)
..++.. . +..+++|+++++ .+++|+.|+.+.+.+...
T Consensus 432 i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~ 473 (605)
T PLN02503 432 LAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYK 473 (605)
T ss_pred HHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHh
Confidence 888432 2 124689999842 368999999999987654
No 67
>PRK12320 hypothetical protein; Provisional
Probab=99.39 E-value=5.2e-12 Score=113.95 Aligned_cols=155 Identities=12% Similarity=0.050 Sum_probs=111.3
Q ss_pred CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc-------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCC
Q 025054 5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPA 76 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~ 76 (258)
.+++++.+|++|+. +.++++++|+|||+++... +.++.+++++|+++| + ++|+ |+...+.
T Consensus 40 ~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~~~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~~G~~--------- 107 (699)
T PRK12320 40 PRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTSAPGGVGITGLAHVANAAARAG-A-RLLFVSQAAGRP--------- 107 (699)
T ss_pred CCceEEEccCCCHH-HHHHhcCCCEEEEcCccCccchhhHHHHHHHHHHHHHHHcC-C-eEEEEECCCCCC---------
Confidence 46889999999984 7888999999999997532 577899999999999 8 5777 6542111
Q ss_pred ccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054 77 KSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR 156 (258)
Q Consensus 77 ~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~ 156 (258)
..| ...|+++.+++++++++|++++||....... .... . ..+... ..++++.++|++|++++++.+++.+
T Consensus 108 ~~~----~~aE~ll~~~~~p~~ILR~~nVYGp~~~~~~-~r~I--~-~~l~~~-~~~~pI~vIyVdDvv~alv~al~~~- 177 (699)
T PRK12320 108 ELY----RQAETLVSTGWAPSLVIRIAPPVGRQLDWMV-CRTV--A-TLLRSK-VSARPIRVLHLDDLVRFLVLALNTD- 177 (699)
T ss_pred ccc----cHHHHHHHhcCCCEEEEeCceecCCCCcccH-hHHH--H-HHHHHH-HcCCceEEEEHHHHHHHHHHHHhCC-
Confidence 011 2578888888899999999999996432100 0000 0 000000 1134566799999999999998764
Q ss_pred CCCceEEEcCCCCccCHHHHHHHHHHH
Q 025054 157 TLNKTLYLRPPKNIYSFKELVALWEKK 183 (258)
Q Consensus 157 ~~~~~~~l~g~~~~~t~~e~~~~~~~~ 183 (258)
.+++||++|+ +.+|++|+++.+...
T Consensus 178 -~~GiyNIG~~-~~~Si~el~~~i~~~ 202 (699)
T PRK12320 178 -RNGVVDLATP-DTTNVVTAWRLLRSV 202 (699)
T ss_pred -CCCEEEEeCC-CeeEHHHHHHHHHHh
Confidence 3459999986 599999999988765
No 68
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.37 E-value=2.8e-11 Score=95.54 Aligned_cols=174 Identities=15% Similarity=0.116 Sum_probs=117.2
Q ss_pred HHHHHHhhC-CCcEEEEccCccc-----------------hhchHHHHHHHHH--hCCccEEEc-CCCC---CCCCCC-C
Q 025054 17 HESLVKAIK-PVDVVISAVGRTE-----------------VEDQFKLIAAIKE--VGNIKRFFP-TEYG---SNVDAG-H 71 (258)
Q Consensus 17 ~~~l~~al~-g~d~Vi~~~~~~~-----------------~~~~~~li~aa~~--~g~vk~~v~-S~~~---~~~~~~-~ 71 (258)
.+.+..... ++|+|||+++.+- +..++.++++..+ .+ ++.+|. |..| ...+.. .
T Consensus 46 ~~~~~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~-P~~~isaSAvGyYG~~~~~~~t 124 (297)
T COG1090 46 WEGLADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETK-PKVLISASAVGYYGHSGDRVVT 124 (297)
T ss_pred cchhhhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCC-CcEEEecceEEEecCCCceeee
Confidence 355666666 7999999998641 5677888887774 45 888887 6644 322110 0
Q ss_pred -CCCCCccchh-hHHHHHHHHH---hCCCCeEEEecCcccccCcCCCCCCC---CCCCCCCceEeccCCCceeeeeccch
Q 025054 72 -PIEPAKSGYA-RKAKIRRAIE---AEGIPHTYVSCNCSFGFFLPTMAQPG---ATAPPRENILFYGDGQPKAIFNKEED 143 (258)
Q Consensus 72 -~~~~~~~~~~-~k~~~e~~l~---~~~~~~t~lr~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~g~~~~~~v~~~D 143 (258)
..++...+.. ....=|+... +.|..++++|.|.+.+.-...+.... ...+ + --.|+|.+.++|||++|
T Consensus 125 E~~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~gl-G---G~~GsGrQ~~SWIhieD 200 (297)
T COG1090 125 EESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGL-G---GKLGSGRQWFSWIHIED 200 (297)
T ss_pred cCCCCCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhcc-C---CccCCCCceeeeeeHHH
Confidence 1122333332 2222343332 25899999999999985433221111 0001 1 23589999999999999
Q ss_pred HHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHH
Q 025054 144 IATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQI 198 (258)
Q Consensus 144 ~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 198 (258)
+.+++..+++++. ..+.||+++|. +++.+|++..+.++++++.. ..+|...+
T Consensus 201 ~v~~I~fll~~~~-lsGp~N~taP~-PV~~~~F~~al~r~l~RP~~-~~vP~~~~ 252 (297)
T COG1090 201 LVNAILFLLENEQ-LSGPFNLTAPN-PVRNKEFAHALGRALHRPAI-LPVPSFAL 252 (297)
T ss_pred HHHHHHHHHhCcC-CCCcccccCCC-cCcHHHHHHHHHHHhCCCcc-ccCcHHHH
Confidence 9999999999975 67789999985 99999999999999997544 46676444
No 69
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.31 E-value=5.8e-11 Score=117.33 Aligned_cols=193 Identities=12% Similarity=0.041 Sum_probs=131.9
Q ss_pred ceeEEeccCC------CHHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCCC
Q 025054 6 NCLIAQGDLH------DHESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN 66 (258)
Q Consensus 6 gv~~~~~D~~------d~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~ 66 (258)
.++++.+|+. +.+.+.++.+++|+|||+++... +.++.+++++|++.+ +++|++ |+.++.
T Consensus 1035 ~i~~~~gDl~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~ 1113 (1389)
T TIGR03443 1035 RIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSAL 1113 (1389)
T ss_pred ceEEEeccCCCccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeec
Confidence 5889999986 44667777889999999997532 677899999999988 999998 664221
Q ss_pred C-------------------CCCC-----CCCCCccchhhHHHHHHHHHh---CCCCeEEEecCcccccCcCCCCCCC-C
Q 025054 67 V-------------------DAGH-----PIEPAKSGYARKAKIRRAIEA---EGIPHTYVSCNCSFGFFLPTMAQPG-A 118 (258)
Q Consensus 67 ~-------------------~~~~-----~~~~~~~~~~~k~~~e~~l~~---~~~~~t~lr~~~~~~~~~~~~~~~~-~ 118 (258)
. .+.. ...+...|..+|..+|.++.. .|++++++|||.++|.......... +
T Consensus 1114 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~ 1193 (1389)
T TIGR03443 1114 DTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDF 1193 (1389)
T ss_pred CcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhH
Confidence 0 0000 011234577899999999865 5899999999999996433211100 0
Q ss_pred C--CCC-CCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEec
Q 025054 119 T--APP-RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYV 193 (258)
Q Consensus 119 ~--~~~-~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~ 193 (258)
. ... .......+++...++|++++|++++++.++..+. ..+..|+++++ ..+++.++++.+.+ .|.+++. +
T Consensus 1194 ~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~-~g~~~~~--~ 1269 (1389)
T TIGR03443 1194 LLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGH-PRIRFNDFLGTLKT-YGYDVEI--V 1269 (1389)
T ss_pred HHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCC-CCCcHHHHHHHHHH-hCCCCCc--c
Confidence 0 000 0012233445667899999999999999987653 23457889864 58999999999976 4765554 5
Q ss_pred CHHHHHHHHH
Q 025054 194 TEDQILQMIQ 203 (258)
Q Consensus 194 ~~~~~~~~~~ 203 (258)
+..++...+.
T Consensus 1270 ~~~~w~~~l~ 1279 (1389)
T TIGR03443 1270 DYVHWRKSLE 1279 (1389)
T ss_pred CHHHHHHHHH
Confidence 5555665553
No 70
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.29 E-value=6.1e-11 Score=108.85 Aligned_cols=186 Identities=13% Similarity=0.096 Sum_probs=121.3
Q ss_pred cccCceeE--EeccCCCHHHHHHhhC--CCcEEEEccCcc---c---------------hhchHHHHHHHHHhCCccEEE
Q 025054 2 LYMINCLI--AQGDLHDHESLVKAIK--PVDVVISAVGRT---E---------------VEDQFKLIAAIKEVGNIKRFF 59 (258)
Q Consensus 2 l~~~gv~~--~~~D~~d~~~l~~al~--g~d~Vi~~~~~~---~---------------~~~~~~li~aa~~~g~vk~~v 59 (258)
|.+.|.++ ..+|++|.+.+...++ +.|+|||+++.. . +.++.+++++|++.| +++++
T Consensus 400 L~~~g~~v~~~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~~~v~ 478 (668)
T PLN02260 400 CEKQGIAYEYGKGRLEDRSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG-LLMMN 478 (668)
T ss_pred HHhCCCeEEeeccccccHHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-CeEEE
Confidence 34456555 5678999999988887 789999999743 1 567899999999999 98777
Q ss_pred cCC---CCCC----------CCCCCCCCC-CccchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCC-
Q 025054 60 PTE---YGSN----------VDAGHPIEP-AKSGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE- 124 (258)
Q Consensus 60 ~S~---~~~~----------~~~~~~~~~-~~~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~- 124 (258)
.|+ |+.. ..+.....+ .++|..+|..+|++++.. -++.++|+.++|+........+....+...
T Consensus 479 ~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~ 557 (668)
T PLN02260 479 FATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKISRYNK 557 (668)
T ss_pred EcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHhccce
Confidence 643 2211 111111222 367788999999999875 367788888888532111000000001111
Q ss_pred ceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHH
Q 025054 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQI 198 (258)
Q Consensus 125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 198 (258)
.+.++ .+..+++|+..++..+++.. .+++||+++++ .+|+.|+++.+.+.++..+.+..++.+++
T Consensus 558 ~~~vp------~~~~~~~~~~~~~~~l~~~~--~~giyni~~~~-~~s~~e~a~~i~~~~~~~~~~~~~~~~~~ 622 (668)
T PLN02260 558 VVNIP------NSMTVLDELLPISIEMAKRN--LRGIWNFTNPG-VVSHNEILEMYKDYIDPGFKWSNFTLEEQ 622 (668)
T ss_pred eeccC------CCceehhhHHHHHHHHHHhC--CCceEEecCCC-cCcHHHHHHHHHHhcCCcccccccCHHHh
Confidence 12221 23566777887778887643 46899999864 89999999999998853333556666554
No 71
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.21 E-value=5.2e-10 Score=83.05 Aligned_cols=153 Identities=20% Similarity=0.194 Sum_probs=107.0
Q ss_pred CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc-------hhchHHHHHHHHHhCCccEEEc-C---CCCCCCCC--CC
Q 025054 5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-------VEDQFKLIAAIKEVGNIKRFFP-T---EYGSNVDA--GH 71 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-------~~~~~~li~aa~~~g~vk~~v~-S---~~~~~~~~--~~ 71 (258)
+++.+++.|+.|++++.+.+.|.|+||+..+... ......++++.+.+| +.|++. . |+-.++.. .+
T Consensus 41 ~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~~~~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g~rLvD 119 (211)
T COG2910 41 QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDNDELHSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEGTRLVD 119 (211)
T ss_pred ccceeecccccChhhhHhhhcCCceEEEeccCCCCChhHHHHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCCceeec
Confidence 6788999999999999999999999999987652 455778999999999 998875 3 22222221 11
Q ss_pred CCCCCccchh-hHHHHH--HHHHh-CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHH
Q 025054 72 PIEPAKSGYA-RKAKIR--RAIEA-EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATY 147 (258)
Q Consensus 72 ~~~~~~~~~~-~k~~~e--~~l~~-~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~ 147 (258)
...-+.+|+. .+...| +.|++ .+++||++-|+.++.++-.. ..+. +.+..+..-..| -+.|+..|.|.+
T Consensus 120 ~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~PGerT-g~yr---lggD~ll~n~~G---~SrIS~aDYAiA 192 (211)
T COG2910 120 TPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFEPGERT-GNYR---LGGDQLLVNAKG---ESRISYADYAIA 192 (211)
T ss_pred CCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHHhcCCcccc-CceE---eccceEEEcCCC---ceeeeHHHHHHH
Confidence 1112345665 566666 56665 56999999999999884322 2221 222333332233 368899999999
Q ss_pred HHHHhcCCCCCCceEEEc
Q 025054 148 TIKAVDDPRTLNKTLYLR 165 (258)
Q Consensus 148 ~~~~l~~~~~~~~~~~l~ 165 (258)
++.-+++|.+.++.+.+.
T Consensus 193 ~lDe~E~~~h~rqRftv~ 210 (211)
T COG2910 193 VLDELEKPQHIRQRFTVA 210 (211)
T ss_pred HHHHHhcccccceeeeec
Confidence 999999998888877653
No 72
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.14 E-value=5.8e-11 Score=95.97 Aligned_cols=144 Identities=16% Similarity=0.127 Sum_probs=78.9
Q ss_pred cCceeEEeccCCCH------HHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCC-
Q 025054 4 MINCLIAQGDLHDH------ESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEY- 63 (258)
Q Consensus 4 ~~gv~~~~~D~~d~------~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~- 63 (258)
...++++.||++++ +.+....+.+|+|||+++..+ +.+++++++.|.+.+ .++|++ |+.
T Consensus 59 ~~ri~~v~GDl~~~~lGL~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~ 137 (249)
T PF07993_consen 59 LSRIEVVEGDLSQPNLGLSDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAY 137 (249)
T ss_dssp TTTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGG
T ss_pred hccEEEEeccccccccCCChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhcc-CcceEEecccc
Confidence 46799999999864 466666678999999998643 789999999999877 779998 652
Q ss_pred -CCCCCCC--------------CCCCCCccchhhHHHHHHHHHh----CCCCeEEEecCcccccCcCCCCCCCC--C---
Q 025054 64 -GSNVDAG--------------HPIEPAKSGYARKAKIRRAIEA----EGIPHTYVSCNCSFGFFLPTMAQPGA--T--- 119 (258)
Q Consensus 64 -~~~~~~~--------------~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr~~~~~~~~~~~~~~~~~--~--- 119 (258)
+...... ......+.|..+|..+|+++++ .|++++|+|||.++|.-.+......- .
T Consensus 138 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~ 217 (249)
T PF07993_consen 138 VAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLL 217 (249)
T ss_dssp GTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHH
T ss_pred ccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHH
Confidence 1111100 0112346788899999999986 38999999999999943322111000 0
Q ss_pred --CCCCCceE-eccCCCceeeeeccchHHHHH
Q 025054 120 --APPRENIL-FYGDGQPKAIFNKEEDIATYT 148 (258)
Q Consensus 120 --~~~~~~~~-~~g~g~~~~~~v~~~D~a~~~ 148 (258)
....+.++ .+++++..++++.++.+|+++
T Consensus 218 ~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 218 RSCIALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp HHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred HHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence 00111222 445555679999999999875
No 73
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.10 E-value=1.5e-09 Score=89.02 Aligned_cols=172 Identities=19% Similarity=0.158 Sum_probs=109.5
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v 55 (258)
++.++++|++|.+++.++++ ++|+|||+++... +.+..++++++ ++.+ .
T Consensus 49 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~ 127 (276)
T PRK06482 49 RLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-G 127 (276)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence 57889999999998887664 5799999987431 34556777776 5566 7
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc--
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN-- 125 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~-- 125 (258)
+++|. |+.+.... .++..+|..+|+.++.+++. .+++++++|||.+...+................
T Consensus 128 ~~iv~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~ 203 (276)
T PRK06482 128 GRIVQVSSEGGQIA----YPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPV 203 (276)
T ss_pred CEEEEEcCcccccC----CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhh
Confidence 89998 77654322 12345677799999876643 589999999999855443321110000000000
Q ss_pred ---eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 025054 126 ---ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIG 185 (258)
Q Consensus 126 ---~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g 185 (258)
.....++.. ..+.+++|++++++.++..+. .+..|++++ ++..+..|+++.+.+.++
T Consensus 204 ~~~~~~~~~~~~-~~~~d~~~~~~a~~~~~~~~~-~~~~~~~g~-~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 204 GDLRRALADGSF-AIPGDPQKMVQAMIASADQTP-APRRLTLGS-DAYASIRAALSERLAALE 263 (276)
T ss_pred HHHHHHHhhccC-CCCCCHHHHHHHHHHHHcCCC-CCeEEecCh-HHHHHHHHHHHHHHHHHH
Confidence 001111111 124689999999999987653 345677775 557777777776666554
No 74
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.06 E-value=1.4e-09 Score=89.18 Aligned_cols=172 Identities=14% Similarity=0.035 Sum_probs=107.8
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v 55 (258)
.+.++++|++|.+++.++++ ++|+|||+++... +.. .+.++..+++.+ .
T Consensus 50 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 128 (275)
T PRK08263 50 RLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-S 128 (275)
T ss_pred CeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C
Confidence 46778999999998877655 5799999997531 222 344444556677 7
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce-
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI- 126 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~- 126 (258)
+++|. |+.+..... +....|..+|+.++.+.+. .|++++++|||.+...+................+
T Consensus 129 ~~iv~vsS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~ 204 (275)
T PRK08263 129 GHIIQISSIGGISAF----PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLR 204 (275)
T ss_pred CEEEEEcChhhcCCC----CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHH
Confidence 88888 665443221 1234577799998766532 5899999999988876542110000000000000
Q ss_pred EeccCCCceeee-eccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHH
Q 025054 127 LFYGDGQPKAIF-NKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKK 183 (258)
Q Consensus 127 ~~~g~g~~~~~~-v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~ 183 (258)
...+.......+ ++++|++++++.+++.+...++.+...++ +.+++.++.+.+.+-
T Consensus 205 ~~~~~~~~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 261 (275)
T PRK08263 205 EELAEQWSERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGV-LDLAKADYERRLATW 261 (275)
T ss_pred HHHHHHHHhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchH-HHHHHHHHHHHHHHH
Confidence 001111112335 89999999999999987655666655553 478888988888773
No 75
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.02 E-value=5.3e-09 Score=84.07 Aligned_cols=148 Identities=16% Similarity=0.117 Sum_probs=98.1
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v 55 (258)
++.++.+|++|++++.++++ ++|+|||+++... +....++++++ ++.+ +
T Consensus 57 ~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 135 (249)
T PRK12825 57 RAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-G 135 (249)
T ss_pred ceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C
Confidence 47889999999998888775 5799999997421 12233444444 6677 8
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH-------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE-------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
+++|. |+.+..... .....|..+|...+.+++ ..++.++++|||+++++......... ... .
T Consensus 136 ~~~i~~SS~~~~~~~----~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~---~~~-~-- 205 (249)
T PRK12825 136 GRIVNISSVAGLPGW----PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEA---REA-K-- 205 (249)
T ss_pred CEEEEECccccCCCC----CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchh---HHh-h--
Confidence 99998 765543221 123456678988776553 25899999999999997654321110 000 0
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
... .....+++.+|+++++..++.++. ..|+.+++.|
T Consensus 206 ~~~--~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~ 244 (249)
T PRK12825 206 DAE--TPLGRSGTPEDIARAVAFLCSDASDYITGQVIEVTG 244 (249)
T ss_pred hcc--CCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence 000 111238899999999999997652 3588999986
No 76
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.97 E-value=1.2e-08 Score=83.65 Aligned_cols=167 Identities=11% Similarity=0.139 Sum_probs=107.1
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHH----hCC
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKE----VGN 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~----~g~ 54 (258)
.+.++.+|+.|++++.++++ +.|+|||+++... +.....+++++.+ .+
T Consensus 59 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~- 137 (276)
T PRK05875 59 AVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG- 137 (276)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence 46788999999998887776 6799999997320 2233445555543 33
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
-.+++. |+....... ++..+|..+|+.++.+++. .++.+++||||.+...+...... ....
T Consensus 138 ~g~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-------~~~~ 206 (276)
T PRK05875 138 GGSFVGISSIAASNTH----RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-------SPEL 206 (276)
T ss_pred CcEEEEEechhhcCCC----CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-------CHHH
Confidence 357887 665432221 2345677799999988864 47999999999887665432111 0000
Q ss_pred -EeccCCCceeeeeccchHHHHHHHHhcCCCC--CCceEEEcCCCCcc----CHHHHHHHHHHHhC
Q 025054 127 -LFYGDGQPKAIFNKEEDIATYTIKAVDDPRT--LNKTLYLRPPKNIY----SFKELVALWEKKIG 185 (258)
Q Consensus 127 -~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~--~~~~~~l~g~~~~~----t~~e~~~~~~~~~g 185 (258)
.-.........+++++|+|+++..+++++.. .++.+++.| +..+ +..|+++.+.+..|
T Consensus 207 ~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~ 271 (276)
T PRK05875 207 SADYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQVINVDG-GHMLRRGPDFSSMLEPVFGADG 271 (276)
T ss_pred HHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECC-CeeccCCccHHHHHHHHhhHHH
Confidence 0000011112357899999999999987643 378899986 5565 77777777766554
No 77
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.97 E-value=7e-09 Score=84.26 Aligned_cols=155 Identities=10% Similarity=0.056 Sum_probs=101.2
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hh----chHHHHHHH-HHhCCc
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VE----DQFKLIAAI-KEVGNI 55 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~----~~~~li~aa-~~~g~v 55 (258)
+.++.+|++|.+++.++++ ++|+|||+++... +. ..+++++++ ++.+ +
T Consensus 58 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~ 136 (262)
T PRK13394 58 AIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-G 136 (262)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-C
Confidence 5678999999998887765 3799999997521 11 256778887 6677 8
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCC-CCCCCC-CCC--C
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTM-AQPGAT-APP--R 123 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~-~~~~~~-~~~--~ 123 (258)
+++|+ |+....... ++...|..+|...+.+++. .++.++++|||.+++.+.... ...... ... .
T Consensus 137 ~~iv~~ss~~~~~~~----~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~ 212 (262)
T PRK13394 137 GVVIYMGSVHSHEAS----PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEE 212 (262)
T ss_pred cEEEEEcchhhcCCC----CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHH
Confidence 99998 765443221 2244677799988876653 479999999999998654221 110000 000 0
Q ss_pred CceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
....+++.+.....+++++|+++++..++..+. ..|+.+++.|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~ 257 (262)
T PRK13394 213 VVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSH 257 (262)
T ss_pred HHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCC
Confidence 001123334455679999999999999987652 2367777764
No 78
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.95 E-value=1.2e-08 Score=82.59 Aligned_cols=156 Identities=13% Similarity=0.165 Sum_probs=95.8
Q ss_pred ceeEEeccCCCHHHHHHh-------hCCCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKA-------IKPVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~a-------l~g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v 55 (258)
.+.++.+|+.|.+++..+ +.+.|+|||+++... ..+ .+.+++++++.+ +
T Consensus 51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~ 129 (255)
T TIGR01963 51 SVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-W 129 (255)
T ss_pred ceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence 477899999999955544 456899999997421 122 233444446677 8
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCC--CCCCCCc
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGA--TAPPREN 125 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~--~~~~~~~ 125 (258)
+++|+ |+....... +....|..+|..++.+.+. .++.++++|||++++++......... .......
T Consensus 130 ~~~v~~ss~~~~~~~----~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~ 205 (255)
T TIGR01963 130 GRIINIASAHGLVAS----PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQ 205 (255)
T ss_pred eEEEEEcchhhcCCC----CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchH
Confidence 89998 654332211 1234566788887766643 48999999999999865322100000 0000000
Q ss_pred e--EeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 126 I--LFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 126 ~--~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
. .....+....++++++|+|++++.++.++ + ..++.|++.|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~ 250 (255)
T TIGR01963 206 VIREVMLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDG 250 (255)
T ss_pred HHHHHHHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcC
Confidence 0 01122344567999999999999999875 2 3467788874
No 79
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.93 E-value=1.9e-08 Score=81.49 Aligned_cols=156 Identities=13% Similarity=0.093 Sum_probs=100.1
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v 55 (258)
.+.++.+|+.|.+++.++++ ++|+|||+++... +...+.++.++++.+ +
T Consensus 54 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 132 (258)
T PRK12429 54 KAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-G 132 (258)
T ss_pred cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-C
Confidence 46789999999999888776 5899999997421 122566777777778 8
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCC-CCCCC-CCCCCc
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMA-QPGAT-APPREN 125 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~-~~~~~-~~~~~~ 125 (258)
++||+ |+...... .++..+|..+|...+.+.+. .++.++.+|||++.+++..... ..... ......
T Consensus 133 ~~iv~iss~~~~~~----~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~ 208 (258)
T PRK12429 133 GRIINMASVHGLVG----SAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEE 208 (258)
T ss_pred eEEEEEcchhhccC----CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHH
Confidence 99998 66543322 12345666788887755542 5799999999999986543211 00000 000000
Q ss_pred --eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 126 --ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 126 --~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
...++.......+++++|+|+++..++.++. ..|+.|++.|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~ 253 (258)
T PRK12429 209 VLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDG 253 (258)
T ss_pred HHHHHHhccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCC
Confidence 0112222233569999999999999987642 2467788764
No 80
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=98.90 E-value=2.9e-08 Score=83.88 Aligned_cols=154 Identities=18% Similarity=0.063 Sum_probs=96.3
Q ss_pred cCceeEEeccCCCHHH-HHHhhC----CCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCC
Q 025054 4 MINCLIAQGDLHDHES-LVKAIK----PVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGS 65 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~-l~~al~----g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~ 65 (258)
..+...+..|.....+ +..... +..+|+.+++... ..+++|+++||+.+| |+||+. |+++.
T Consensus 126 d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~ 204 (411)
T KOG1203|consen 126 DLGLQNVEADVVTAIDILKKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGG 204 (411)
T ss_pred ccccceeeeccccccchhhhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC-CceEEEEEeecC
Confidence 3455566665543322 222222 3456666665321 578999999999999 999998 88876
Q ss_pred CCCCCCCCCCCc---cchhhHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccc
Q 025054 66 NVDAGHPIEPAK---SGYARKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEE 142 (258)
Q Consensus 66 ~~~~~~~~~~~~---~~~~~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~ 142 (258)
..-... .+... ....+|..+|++++++|+++|+||++.++.+......... . .......++.+--.++..
T Consensus 205 ~~~~~~-~~~~~~~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~i~r~ 277 (411)
T KOG1203|consen 205 TKFNQP-PNILLLNGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDTGGQREVVV----D--DEKELLTVDGGAYSISRL 277 (411)
T ss_pred cccCCC-chhhhhhhhhhHHHHhHHHHHHhcCCCcEEEeccccccCCCCcceecc----c--Cccccccccccceeeehh
Confidence 433211 11111 2236899999999999999999999999886654321111 1 111111122222468999
Q ss_pred hHHHHHHHHhcCCCC-CCceEEEc
Q 025054 143 DIATYTIKAVDDPRT-LNKTLYLR 165 (258)
Q Consensus 143 D~a~~~~~~l~~~~~-~~~~~~l~ 165 (258)
|+|+..+.++..+.. ..++.++.
T Consensus 278 ~vael~~~all~~~~~~~k~~~~v 301 (411)
T KOG1203|consen 278 DVAELVAKALLNEAATFKKVVELV 301 (411)
T ss_pred hHHHHHHHHHhhhhhccceeEEee
Confidence 999999999988754 44555554
No 81
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=98.88 E-value=9e-09 Score=79.17 Aligned_cols=159 Identities=14% Similarity=0.125 Sum_probs=107.3
Q ss_pred eeEEeccCCCHHHHHHhhCCCcEEEEccCccc---------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCC
Q 025054 7 CLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPA 76 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~ 76 (258)
+.+..+|.....-+...+.|...++.+++... -+...+-+.||+++| |++|++ |.-...... .- .
T Consensus 98 vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~~~m~~ing~ani~a~kaa~~~g-v~~fvyISa~d~~~~~---~i-~ 172 (283)
T KOG4288|consen 98 VSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNIILMDRINGTANINAVKAAAKAG-VPRFVYISAHDFGLPP---LI-P 172 (283)
T ss_pred cchhhccccccCcchhhhcCCcccHHHhcCccchHHHHHhccHhhHHHHHHHHHcC-CceEEEEEhhhcCCCC---cc-c
Confidence 56667776665567788889999999887643 345677888999999 999999 753221111 11 2
Q ss_pred ccchhhHHHHHHHHHh-CCCCeEEEecCcccccC--cCCCC---CCCCC-------C-CCCCceEeccCCCceeeeeccc
Q 025054 77 KSGYARKAKIRRAIEA-EGIPHTYVSCNCSFGFF--LPTMA---QPGAT-------A-PPRENILFYGDGQPKAIFNKEE 142 (258)
Q Consensus 77 ~~~~~~k~~~e~~l~~-~~~~~t~lr~~~~~~~~--~~~~~---~~~~~-------~-~~~~~~~~~g~g~~~~~~v~~~ 142 (258)
..|+..|.++|..|.. .+..-.++|||.+||.- ..... ..+.. . ...+++++.| ..-.+.+.++
T Consensus 173 rGY~~gKR~AE~Ell~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg--~l~~ppvnve 250 (283)
T KOG4288|consen 173 RGYIEGKREAEAELLKKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLG--PLLAPPVNVE 250 (283)
T ss_pred hhhhccchHHHHHHHHhcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccc--cccCCCcCHH
Confidence 3799999999988766 67899999999999841 11000 00000 0 1122345554 5667899999
Q ss_pred hHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHH
Q 025054 143 DIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEK 182 (258)
Q Consensus 143 D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~ 182 (258)
++|.++++++++|... | .+|+.|+.+...|
T Consensus 251 ~VA~aal~ai~dp~f~---------G-vv~i~eI~~~a~k 280 (283)
T KOG4288|consen 251 SVALAALKAIEDPDFK---------G-VVTIEEIKKAAHK 280 (283)
T ss_pred HHHHHHHHhccCCCcC---------c-eeeHHHHHHHHHH
Confidence 9999999999998522 2 5666677666554
No 82
>PRK09291 short chain dehydrogenase; Provisional
Probab=98.88 E-value=2.5e-08 Score=80.82 Aligned_cols=100 Identities=18% Similarity=0.128 Sum_probs=73.6
Q ss_pred ceeEEeccCCCHHHHHHhhC-CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCccEEEc-
Q 025054 6 NCLIAQGDLHDHESLVKAIK-PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIKRFFP- 60 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk~~v~- 60 (258)
++.++.+|++|++++.+++. ++|+|||+++... +...+.++.++++.+ .+++|.
T Consensus 52 ~~~~~~~D~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ 130 (257)
T PRK09291 52 ALRVEKLDLTDAIDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFT 130 (257)
T ss_pred cceEEEeeCCCHHHHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEE
Confidence 47889999999999999987 8999999987421 123455667777778 789998
Q ss_pred CCCCCCCCCCCCCCCCccchhhHHHHHHHHH-------hCCCCeEEEecCcccccCc
Q 025054 61 TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE-------AEGIPHTYVSCNCSFGFFL 110 (258)
Q Consensus 61 S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~t~lr~~~~~~~~~ 110 (258)
|+.+..... +....|..+|..++.+.+ ..|+++++||||++..++.
T Consensus 131 SS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~ 183 (257)
T PRK09291 131 SSMAGLITG----PFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFN 183 (257)
T ss_pred cChhhccCC----CCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccch
Confidence 765433221 124467779999986543 3689999999999877653
No 83
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.87 E-value=3.2e-08 Score=80.24 Aligned_cols=164 Identities=15% Similarity=0.098 Sum_probs=105.9
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHH----HHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIA----AIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~----aa~~~g~v 55 (258)
+++++.+|+.|.+++.++++ +.|+|||+++... +....++++ .+++.+ .
T Consensus 50 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~ 128 (257)
T PRK07074 50 RFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-R 128 (257)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence 57889999999999988776 4799999997421 122233344 445556 6
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|+ |+...... . ....|..+|+.++.+++. .++.++.++||++.+........ ....+.
T Consensus 129 ~~iv~~sS~~~~~~-~----~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~ 197 (257)
T PRK07074 129 GAVVNIGSVNGMAA-L----GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVA------ANPQVF 197 (257)
T ss_pred eEEEEEcchhhcCC-C----CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccc------cChHHH
Confidence 78887 65432211 1 123577799998877754 37999999999888754321100 000000
Q ss_pred e-ccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcCCCCccCHHHHHHHHHH
Q 025054 128 F-YGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRPPKNIYSFKELVALWEK 182 (258)
Q Consensus 128 ~-~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g~~~~~t~~e~~~~~~~ 182 (258)
- .........+++++|+++++..++.++ . ..|..+++.| +...+.+|+.+.+..
T Consensus 198 ~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~-g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 198 EELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVDG-GLTAGNREMARTLTL 254 (257)
T ss_pred HHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCC-CcCcCChhhhhhhcc
Confidence 0 001122356899999999999999764 2 2467777775 678889999988764
No 84
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=98.86 E-value=1.6e-08 Score=74.68 Aligned_cols=99 Identities=18% Similarity=0.140 Sum_probs=81.4
Q ss_pred CceeEEeccCCCHHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCC
Q 025054 5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGH 71 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~ 71 (258)
..+..+..|++..+.+...++|.|+.|++.+... -+....++++|++.| ||+|+. |+.|++.+.
T Consensus 62 k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GAd~sS-- 138 (238)
T KOG4039|consen 62 KVVAQVEVDFSKLSQLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGADPSS-- 138 (238)
T ss_pred ceeeeEEechHHHHHHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhCC-CeEEEEEeccCCCccc--
Confidence 3466778899889999999999999999987643 244567888999999 999999 999998754
Q ss_pred CCCCCccchhhHHHHHHHHHhCCC-CeEEEecCcccccCc
Q 025054 72 PIEPAKSGYARKAKIRRAIEAEGI-PHTYVSCNCSFGFFL 110 (258)
Q Consensus 72 ~~~~~~~~~~~k~~~e~~l~~~~~-~~t~lr~~~~~~~~~ 110 (258)
...|...|.++|+.+.+.++ .+.|+|||.+.+.-.
T Consensus 139 ----rFlY~k~KGEvE~~v~eL~F~~~~i~RPG~ll~~R~ 174 (238)
T KOG4039|consen 139 ----RFLYMKMKGEVERDVIELDFKHIIILRPGPLLGERT 174 (238)
T ss_pred ----ceeeeeccchhhhhhhhccccEEEEecCcceecccc
Confidence 34577899999999999887 488999999887543
No 85
>PRK06182 short chain dehydrogenase; Validated
Probab=98.86 E-value=3.4e-08 Score=80.87 Aligned_cols=146 Identities=13% Similarity=0.045 Sum_probs=90.8
Q ss_pred CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCC
Q 025054 5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGN 54 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~ 54 (258)
.+++++.+|++|.+++.++++ ++|+|||+++... +...+.++..+++.+
T Consensus 46 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~- 124 (273)
T PRK06182 46 LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR- 124 (273)
T ss_pred CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-
Confidence 468899999999999888776 7899999997531 123466777777777
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH-------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE-------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
..++|. |+.+..... +....|..+|+.++.+.+ ..++++++++||++..++.................
T Consensus 125 ~g~iv~isS~~~~~~~----~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 200 (273)
T PRK06182 125 SGRIINISSMGGKIYT----PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAY 200 (273)
T ss_pred CCEEEEEcchhhcCCC----CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccch
Confidence 788988 765432211 112346679999987643 25899999999999876542111000000000000
Q ss_pred --------EeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 127 --------LFYGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 127 --------~~~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
...........+.+.+|+|++++.++...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~ 237 (273)
T PRK06182 201 AEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTAR 237 (273)
T ss_pred HHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhCC
Confidence 00001111123568889999888888754
No 86
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.84 E-value=7.8e-08 Score=76.85 Aligned_cols=142 Identities=17% Similarity=0.051 Sum_probs=94.8
Q ss_pred cCceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhC
Q 025054 4 MINCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVG 53 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g 53 (258)
..+++++.+|+.|.+++.++++ ++|+|||+++... .....++++++ ++.+
T Consensus 53 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 132 (239)
T PRK12828 53 ADALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG 132 (239)
T ss_pred hcCceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC
Confidence 3467888999999998887776 6899999987421 22334555555 4566
Q ss_pred CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054 54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN 125 (258)
Q Consensus 54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~ 125 (258)
++++|. |+.+..... ++...|..+|...+.+++. .++.++++|||++++......
T Consensus 133 -~~~iv~~sS~~~~~~~----~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~------------ 195 (239)
T PRK12828 133 -GGRIVNIGAGAALKAG----PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD------------ 195 (239)
T ss_pred -CCEEEEECchHhccCC----CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc------------
Confidence 889998 765443221 1234566688877666542 589999999999987632210
Q ss_pred eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.+. .....+++++|+|+++..++.++. ..|+.+.+.|
T Consensus 196 --~~~--~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g 234 (239)
T PRK12828 196 --MPD--ADFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDG 234 (239)
T ss_pred --CCc--hhhhcCCCHHHHHHHHHHHhCcccccccceEEEecC
Confidence 000 011237899999999999998752 2477888876
No 87
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.83 E-value=1.2e-07 Score=77.64 Aligned_cols=173 Identities=13% Similarity=0.092 Sum_probs=108.6
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v 55 (258)
.+.++.+|++|++++.++++ ++|++||+++... +...+.++.++++.+ .
T Consensus 51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~ 129 (273)
T PRK07825 51 LVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-R 129 (273)
T ss_pred cceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C
Confidence 37788999999998766554 5799999987421 123345556666777 7
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHH-------HhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAI-------EAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l-------~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+....... +....|..+|+.++.+. +.+|+.+++|+||++...+....
T Consensus 130 g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~-------------- 191 (273)
T PRK07825 130 GHVVNVASLAGKIPV----PGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT-------------- 191 (273)
T ss_pred CEEEEEcCccccCCC----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc--------------
Confidence 88988 765443221 23446777998776543 34689999999998765543211
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCCCC---CceEE-EcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHH
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTL---NKTLY-LRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQM 201 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~---~~~~~-l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~ 201 (258)
. +....++++.+|+|+.++.++.+++.. +.... ... -..+....+.+.+.+..|....+...+.++-.+.
T Consensus 192 -~--~~~~~~~~~~~~va~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (273)
T PRK07825 192 -G--GAKGFKNVEPEDVAAAIVGTVAKPRPEVRVPRALGPLAQ-AQRLLPRRVREALNRLLGGDRVFLDVDTAARAAY 265 (273)
T ss_pred -c--cccCCCCCCHHHHHHHHHHHHhCCCCEEeccHHHHHHHH-HHHhCcHHHHHHHHHHhcccceeechhhHHHHHH
Confidence 0 011235789999999999999876321 11000 000 0134456677777777777766666666554443
No 88
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.83 E-value=4.1e-08 Score=79.13 Aligned_cols=157 Identities=17% Similarity=0.103 Sum_probs=100.9
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------hhchHHHHHHHHHhC-CccEEEc-CCC
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------VEDQFKLIAAIKEVG-NIKRFFP-TEY 63 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g-~vk~~v~-S~~ 63 (258)
.+.++.+|++|++++.++++ ++|+|||+++... +.+..++++++...- +-.++|+ |+.
T Consensus 57 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~ 136 (248)
T PRK07806 57 RASAVGADLTDEESVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH 136 (248)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence 36788999999998887765 5899999986421 456778888887642 1247887 664
Q ss_pred CCCCCCC-CCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCce
Q 025054 64 GSNVDAG-HPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPK 135 (258)
Q Consensus 64 ~~~~~~~-~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 135 (258)
+...... ...+...+|..+|+.+|.+++. .++.+++++|+.+.+++...+.... ..+.. .......
T Consensus 137 ~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~----~~~~~--~~~~~~~ 210 (248)
T PRK07806 137 QAHFIPTVKTMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRL----NPGAI--EARREAA 210 (248)
T ss_pred hhhcCccccCCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccC----CHHHH--HHHHhhh
Confidence 3321111 1112234677799999988765 5789999999877665433211000 00000 0000001
Q ss_pred eeeeccchHHHHHHHHhcCCCCCCceEEEcCCC
Q 025054 136 AIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPK 168 (258)
Q Consensus 136 ~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~ 168 (258)
..+++++|+|++++.+++.+...|+.+++.|+.
T Consensus 211 ~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~~~ 243 (248)
T PRK07806 211 GKLYTVSEFAAEVARAVTAPVPSGHIEYVGGAD 243 (248)
T ss_pred cccCCHHHHHHHHHHHhhccccCccEEEecCcc
Confidence 258999999999999998765578889998753
No 89
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.83 E-value=5.7e-08 Score=78.34 Aligned_cols=150 Identities=15% Similarity=0.110 Sum_probs=96.0
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v 55 (258)
++.++.+|++|++++.++++ +.|+|||+++... ......+++++ ++.+ .
T Consensus 55 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~ 133 (250)
T PRK08063 55 KALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-G 133 (250)
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C
Confidence 46788999999998888776 4799999997421 12233444444 4455 6
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
++||+ |+.+..... ++...|..+|..++.+++. .++.+++|+||++.......+.... ....
T Consensus 134 g~iv~~sS~~~~~~~----~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~------~~~~ 203 (250)
T PRK08063 134 GKIISLSSLGSIRYL----ENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNRE------ELLE 203 (250)
T ss_pred eEEEEEcchhhccCC----CCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCch------HHHH
Confidence 79998 776543221 2345677799999988754 5799999999999876543211100 0000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
..........+++.+|+|++++.++.++. ..|+.+++.|
T Consensus 204 ~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g 244 (250)
T PRK08063 204 DARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDG 244 (250)
T ss_pred HHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence 00000001136899999999999998753 3478888875
No 90
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.80 E-value=2.2e-07 Score=73.95 Aligned_cols=184 Identities=18% Similarity=0.205 Sum_probs=127.4
Q ss_pred CceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc---------------hhchHHHHHHHHHhCCc--cEEEc-CC--
Q 025054 5 INCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE---------------VEDQFKLIAAIKEVGNI--KRFFP-TE-- 62 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g~v--k~~v~-S~-- 62 (258)
....++.+|++|...|.++++. .|-|+|+++.+. .-++.+|++|.+..| . -||.. |+
T Consensus 55 ~~l~l~~gDLtD~~~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~-~~~~rfYQAStSE 133 (345)
T COG1089 55 PRLHLHYGDLTDSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILG-EKKTRFYQASTSE 133 (345)
T ss_pred ceeEEEeccccchHHHHHHHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhC-CcccEEEecccHH
Confidence 4478999999999999999984 589999998653 356789999999877 3 35555 43
Q ss_pred -CCCC----CCCCCCCCCCccchhhHHHHHHHH----HhCCCCeEEEecCcccccCcCCCCCCCC-----------CCCC
Q 025054 63 -YGSN----VDAGHPIEPAKSGYARKAKIRRAI----EAEGIPHTYVSCNCSFGFFLPTMAQPGA-----------TAPP 122 (258)
Q Consensus 63 -~~~~----~~~~~~~~~~~~~~~~k~~~e~~l----~~~~~~~t~lr~~~~~~~~~~~~~~~~~-----------~~~~ 122 (258)
||.. ..+..+..|.+||..+|.-+--.. .+.|+-. ..|..|..-.|... ..+ +...
T Consensus 134 ~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~A---cnGILFNHESP~Rg-e~FVTRKIt~ava~Ik~G 209 (345)
T COG1089 134 LYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFA---CNGILFNHESPLRG-ETFVTRKITRAVARIKLG 209 (345)
T ss_pred hhcCcccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCcee---ecceeecCCCCCCc-cceehHHHHHHHHHHHcc
Confidence 4532 223445667888887777665433 3345433 34555543222110 000 0012
Q ss_pred CCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHH
Q 025054 123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTED 196 (258)
Q Consensus 123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~ 196 (258)
...-...|+-+.+++|=+..|..+++...|.++ .+..|.++. +...|.+|++++..+..|.++.++.-..+
T Consensus 210 ~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~--~PddyViAT-g~t~sVrefv~~Af~~~g~~l~w~g~g~~ 280 (345)
T COG1089 210 LQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQE--EPDDYVIAT-GETHSVREFVELAFEMVGIDLEWEGTGVD 280 (345)
T ss_pred ccceEEeccccccccccchHHHHHHHHHHHccC--CCCceEEec-CceeeHHHHHHHHHHHcCceEEEeecccc
Confidence 223456788999999999999999999999887 466677764 67999999999999999988877654433
No 91
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.79 E-value=8.9e-08 Score=77.15 Aligned_cols=150 Identities=17% Similarity=0.105 Sum_probs=96.7
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v 55 (258)
.+.++.+|+.|.+++.++++ ++|.|||+++... +....++++++ ++.+ .
T Consensus 56 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 134 (251)
T PRK12826 56 KARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-G 134 (251)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence 37889999999999988886 5899999986531 22334555555 4566 7
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
+++|+ |+.+..... .+...+|..+|..++.+++. .+++++++|||.++++......... ...
T Consensus 135 ~~ii~~ss~~~~~~~---~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~-------~~~ 204 (251)
T PRK12826 135 GRIVLTSSVAGPRVG---YPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQ-------WAE 204 (251)
T ss_pred cEEEEEechHhhccC---CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchH-------HHH
Confidence 88887 665443111 12344566799888776653 4899999999999987543211100 000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
..........+++++|+|.++..++..+. ..|+.+++.|
T Consensus 205 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~ 245 (251)
T PRK12826 205 AIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQTLPVDG 245 (251)
T ss_pred HHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence 00000000147899999999999887653 2478888875
No 92
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.77 E-value=1.1e-07 Score=76.73 Aligned_cols=153 Identities=16% Similarity=0.103 Sum_probs=96.7
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hh----chHHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VE----DQFKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~----~~~~li~aa~~~g~v 55 (258)
.+.++.+|++|++++.++++ ++|+|||+++... +. ..+.++.++++.+ .
T Consensus 54 ~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 132 (252)
T PRK06138 54 RAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-G 132 (252)
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-C
Confidence 36889999999999888775 6899999998521 11 2245556666777 7
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
++++. |+....... +...+|..+|...+.+++. .++.++.+|||.+.+........ . . .....+.
T Consensus 133 ~~ii~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~-~-~~~~~~~ 205 (252)
T PRK06138 133 GSIVNTASQLALAGG----RGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFA-R-H-ADPEALR 205 (252)
T ss_pred eEEEEECChhhccCC----CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhc-c-c-cChHHHH
Confidence 88888 765443221 1245677799988877654 48999999999998765432110 0 0 0000000
Q ss_pred eccCCCcee-eeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054 128 FYGDGQPKA-IFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~-~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g 166 (258)
.......+. .+++.+|+|.++..++.++. . .|..+.+.|
T Consensus 206 ~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~ 247 (252)
T PRK06138 206 EALRARHPMNRFGTAEEVAQAALFLASDESSFATGTTLVVDG 247 (252)
T ss_pred HHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence 000111222 27889999999999998763 2 355666653
No 93
>PRK08219 short chain dehydrogenase; Provisional
Probab=98.72 E-value=2.3e-07 Score=73.56 Aligned_cols=141 Identities=18% Similarity=0.118 Sum_probs=90.3
Q ss_pred ceeEEeccCCCHHHHHHhhC---CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCccEEE
Q 025054 6 NCLIAQGDLHDHESLVKAIK---PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIKRFF 59 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk~~v 59 (258)
+++++.+|++|.+++.++++ ++|+|||+++... ....+++++++++.+ +++|
T Consensus 48 ~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v 125 (227)
T PRK08219 48 GATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVV 125 (227)
T ss_pred cceEEecCCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEE
Confidence 57899999999999999887 5899999997521 122455666665554 5677
Q ss_pred c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-----CC-CCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCC
Q 025054 60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-----EG-IPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDG 132 (258)
Q Consensus 60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~-~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g 132 (258)
+ |+....... ++..+|..+|..++.+++. .+ ++++.++||.+.+........ . . +..
T Consensus 126 ~~ss~~~~~~~----~~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~------~--~----~~~ 189 (227)
T PRK08219 126 FINSGAGLRAN----PGWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGLVA------Q--E----GGE 189 (227)
T ss_pred EEcchHhcCcC----CCCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhhhh------h--h----ccc
Confidence 6 554332211 2245677799988876553 34 899999998766543221110 0 0 000
Q ss_pred CceeeeeccchHHHHHHHHhcCCCCCCceEEEc
Q 025054 133 QPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLR 165 (258)
Q Consensus 133 ~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~ 165 (258)
.....+++++|+|++++.+++.+. .+..+++.
T Consensus 190 ~~~~~~~~~~dva~~~~~~l~~~~-~~~~~~~~ 221 (227)
T PRK08219 190 YDPERYLRPETVAKAVRFAVDAPP-DAHITEVV 221 (227)
T ss_pred cCCCCCCCHHHHHHHHHHHHcCCC-CCccceEE
Confidence 112357999999999999998763 34455443
No 94
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.70 E-value=1.5e-07 Score=77.27 Aligned_cols=154 Identities=13% Similarity=0.132 Sum_probs=93.1
Q ss_pred ceeEEeccCCCHHHHHH---h---hCCCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCcc
Q 025054 6 NCLIAQGDLHDHESLVK---A---IKPVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNIK 56 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~---a---l~g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~vk 56 (258)
.++++.+|++|++++.+ + +.+.|+|||+++... +.+..+++++ +++.+ .+
T Consensus 55 ~~~~~~~D~~d~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ 133 (280)
T PRK06914 55 NIKVQQLDVTDQNSIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SG 133 (280)
T ss_pred ceeEEecCCCCHHHHHHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CC
Confidence 57889999999988765 1 235799999987421 2223334444 56666 78
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCC-Cce-
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPR-ENI- 126 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~-~~~- 126 (258)
++|. |+.+..... ++..+|..+|..++.+++. .+++++++|||.+..++.............. ...
T Consensus 134 ~iv~vsS~~~~~~~----~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~ 209 (280)
T PRK06914 134 KIINISSISGRVGF----PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYK 209 (280)
T ss_pred EEEEECcccccCCC----CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchH
Confidence 8887 654332221 2345677799998877653 4899999999999887543211100000000 000
Q ss_pred ----EeccC-CCceeeeeccchHHHHHHHHhcCCCCCCceEEEc
Q 025054 127 ----LFYGD-GQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLR 165 (258)
Q Consensus 127 ----~~~g~-g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~ 165 (258)
.+... ......+++++|+|++++.++.+++. +..|++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~-~~~~~~~ 252 (280)
T PRK06914 210 EYMKKIQKHINSGSDTFGNPIDVANLIVEIAESKRP-KLRYPIG 252 (280)
T ss_pred HHHHHHHHHHhhhhhccCCHHHHHHHHHHHHcCCCC-CcccccC
Confidence 00000 01123478999999999999988752 3456665
No 95
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.69 E-value=3.5e-07 Score=73.97 Aligned_cols=150 Identities=12% Similarity=0.119 Sum_probs=94.7
Q ss_pred ceeEEeccCCCHHHHHHhhC-------------CCcEEEEccCccc-------------------hhchHHHHHHHHHh-
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEV- 52 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~- 52 (258)
.+.++.+|++|++++.++++ ++|+|||+++... +....++++++...
T Consensus 57 ~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 136 (254)
T PRK12746 57 KAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLL 136 (254)
T ss_pred cEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 36788999999999988776 4899999997521 23445566666542
Q ss_pred -CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCC
Q 025054 53 -GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPR 123 (258)
Q Consensus 53 -g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~ 123 (258)
+ ..++|. |+...... .++...|..+|+.++.+.+. .++.+++++||++.+.+........
T Consensus 137 ~~-~~~~v~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~------ 205 (254)
T PRK12746 137 RA-EGRVINISSAEVRLG----FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDP------ 205 (254)
T ss_pred hc-CCEEEEECCHHhcCC----CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccCh------
Confidence 3 347887 66543221 12345677799998876532 5799999999988776532211000
Q ss_pred CceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
..............+++++|+|+++..++.++. ..|+.+++.|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~ 250 (254)
T PRK12746 206 EIRNFATNSSVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSG 250 (254)
T ss_pred hHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCC
Confidence 000001111112346789999999998887653 2477888874
No 96
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.68 E-value=1.5e-07 Score=75.49 Aligned_cols=147 Identities=14% Similarity=0.109 Sum_probs=94.0
Q ss_pred eeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc-------------------hhchHHHHHHH----HHhCCcc
Q 025054 7 CLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIK 56 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk 56 (258)
+.++.+|+.|++++.+++++ +|+|||+++... +....++++++ .+.+ ++
T Consensus 56 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~ 134 (246)
T PRK05653 56 ARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YG 134 (246)
T ss_pred eEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-Cc
Confidence 67788999999988887764 599999996521 22344555555 4567 88
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
++|. |+.+.... ..+..+|..+|...+...+. .++.++++|||.+++.....+.... .......+
T Consensus 135 ~ii~~ss~~~~~~----~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~---~~~~~~~~ 207 (246)
T PRK05653 135 RIVNISSVSGVTG----NPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEV---KAEILKEI 207 (246)
T ss_pred EEEEECcHHhccC----CCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHH---HHHHHhcC
Confidence 9997 66543321 12344566688876655433 5899999999999886543211100 00000001
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRP 166 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g 166 (258)
....+++.+|+++++..++... ...++.+++.|
T Consensus 208 -----~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g 242 (246)
T PRK05653 208 -----PLGRLGQPEEVANAVAFLASDAASYITGQVIPVNG 242 (246)
T ss_pred -----CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence 1134788999999999998753 23577888886
No 97
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.68 E-value=3.2e-07 Score=75.26 Aligned_cols=146 Identities=14% Similarity=0.093 Sum_probs=89.6
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~v 55 (258)
++..+.+|++|.+++.++++ ++|+|||+++... +.+..+++++ +++.+ .
T Consensus 51 ~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~ 129 (277)
T PRK06180 51 RALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-R 129 (277)
T ss_pred CeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-C
Confidence 47788999999999888776 4799999998531 2334455555 34455 6
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCC-Cc-
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPR-EN- 125 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~-~~- 125 (258)
+++|. |+.+.... .++...|..+|+.++.+++. .|++++++|||++..++.............. ..
T Consensus 130 ~~iv~iSS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~ 205 (277)
T PRK06180 130 GHIVNITSMGGLIT----MPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDAL 205 (277)
T ss_pred CEEEEEecccccCC----CCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHH
Confidence 78887 76544322 12345677799988876643 4899999999999876532210000000000 00
Q ss_pred eEeccC---CCceeeeeccchHHHHHHHHhcCCC
Q 025054 126 ILFYGD---GQPKAIFNKEEDIATYTIKAVDDPR 156 (258)
Q Consensus 126 ~~~~g~---g~~~~~~v~~~D~a~~~~~~l~~~~ 156 (258)
+..... ......+.+++|+|+++..+++.+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~ 239 (277)
T PRK06180 206 FGPIRQAREAKSGKQPGDPAKAAQAILAAVESDE 239 (277)
T ss_pred HHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCCC
Confidence 000000 0011235689999999999998763
No 98
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.66 E-value=4.2e-07 Score=74.23 Aligned_cols=102 Identities=18% Similarity=0.128 Sum_probs=72.7
Q ss_pred CceeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc-------------------h----hchHHHHHHHHHhCC
Q 025054 5 INCLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE-------------------V----EDQFKLIAAIKEVGN 54 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g~ 54 (258)
.+++++.+|++|++++.+++++ .|+|||+++... + ...+.++..+++.+
T Consensus 45 ~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~- 123 (270)
T PRK06179 45 PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG- 123 (270)
T ss_pred CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence 3678999999999999988874 699999998531 1 22334444467777
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcC
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLP 111 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~ 111 (258)
.+++|. |+....... +....|..+|..++.+.+. .|+++++++||++.+++..
T Consensus 124 ~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~ 184 (270)
T PRK06179 124 SGRIINISSVLGFLPA----PYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDA 184 (270)
T ss_pred CceEEEECCccccCCC----CCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccccc
Confidence 889998 665432221 1234677799998876543 6899999999998887643
No 99
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=98.66 E-value=9.9e-07 Score=75.92 Aligned_cols=178 Identities=15% Similarity=0.142 Sum_probs=122.4
Q ss_pred ceeEEeccCCC------HHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCCCCC
Q 025054 6 NCLIAQGDLHD------HESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN 66 (258)
Q Consensus 6 gv~~~~~D~~d------~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~ 66 (258)
.+..+.||..+ ..++....+.+|+|||+|+... ..+++++++-|++..+.+-+++ |+.-+.
T Consensus 80 Kv~pi~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n 159 (467)
T KOG1221|consen 80 KVVPIAGDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN 159 (467)
T ss_pred cceeccccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee
Confidence 35667888753 3456667779999999998642 6789999999999777899998 653211
Q ss_pred CC------C-----C--CC-----------------------CCCCccchhhHHHHHHHHHh--CCCCeEEEecCccccc
Q 025054 67 VD------A-----G--HP-----------------------IEPAKSGYARKAKIRRAIEA--EGIPHTYVSCNCSFGF 108 (258)
Q Consensus 67 ~~------~-----~--~~-----------------------~~~~~~~~~~k~~~e~~l~~--~~~~~t~lr~~~~~~~ 108 (258)
.. . . .+ ...++.|.-+|+..|+.+.+ .++|.+|+||+.+...
T Consensus 160 ~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st 239 (467)
T KOG1221|consen 160 CNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITST 239 (467)
T ss_pred cccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceecc
Confidence 00 0 0 00 01356677799999999987 5899999999999875
Q ss_pred CcCCCCCCCCCC-----------CCCCce-EeccCCCceeeeeccchHHHHHHHHhcC--CC---CCCceEEEc-CCCCc
Q 025054 109 FLPTMAQPGATA-----------PPRENI-LFYGDGQPKAIFNKEEDIATYTIKAVDD--PR---TLNKTLYLR-PPKNI 170 (258)
Q Consensus 109 ~~~~~~~~~~~~-----------~~~~~~-~~~g~g~~~~~~v~~~D~a~~~~~~l~~--~~---~~~~~~~l~-g~~~~ 170 (258)
+-..+ +|+.+ ...+.+ .+.++.+...++|.++.++.++..+.-. .. ....+|+++ +..+.
T Consensus 240 ~~EP~--pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np 317 (467)
T KOG1221|consen 240 YKEPF--PGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNP 317 (467)
T ss_pred ccCCC--CCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCc
Confidence 54332 12211 122222 3456778888999999999998865521 11 124588886 44568
Q ss_pred cCHHHHHHHHHHHhC
Q 025054 171 YSFKELVALWEKKIG 185 (258)
Q Consensus 171 ~t~~e~~~~~~~~~g 185 (258)
+|+.++.+...+..-
T Consensus 318 ~t~~~~~e~~~~~~~ 332 (467)
T KOG1221|consen 318 VTWGDFIELALRYFE 332 (467)
T ss_pred ccHHHHHHHHHHhcc
Confidence 999999999888764
No 100
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.65 E-value=1.7e-07 Score=76.04 Aligned_cols=161 Identities=12% Similarity=0.127 Sum_probs=100.5
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC----Cc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG----NI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g----~v 55 (258)
.+.++.+|++|.+++.++++ +.|++||+++... +....++++++.... .-
T Consensus 53 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 132 (257)
T PRK07067 53 AAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRG 132 (257)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCC
Confidence 46788999999998887776 5799999987421 345567777765431 01
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCC-CC-CCCCC-CC
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQ-PG-ATAPP-RE 124 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~-~~-~~~~~-~~ 124 (258)
.++|+ |+....... ++...|..+|+.++.+.+. .++++++|+||.+.+........ .. ..... ..
T Consensus 133 ~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~ 208 (257)
T PRK07067 133 GKIINMASQAGRRGE----ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGE 208 (257)
T ss_pred cEEEEeCCHHhCCCC----CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHH
Confidence 36776 664432221 2345677799998877653 58999999999998865432110 00 00000 00
Q ss_pred ceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcCCCCcc
Q 025054 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRPPKNIY 171 (258)
Q Consensus 125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g~~~~~ 171 (258)
....++.+.....+++.+|+|+++..++.++. ..|+.+++.| +..+
T Consensus 209 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~g-g~~~ 256 (257)
T PRK07067 209 KKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDG-GNWM 256 (257)
T ss_pred HHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecC-CEeC
Confidence 11122223333458899999999999998752 3478888886 4343
No 101
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.64 E-value=2.2e-07 Score=77.06 Aligned_cols=106 Identities=13% Similarity=0.050 Sum_probs=80.7
Q ss_pred ccCceeEEeccCC------CHHHHHHhhCCCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEc-CCC
Q 025054 3 YMINCLIAQGDLH------DHESLVKAIKPVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFP-TEY 63 (258)
Q Consensus 3 ~~~gv~~~~~D~~------d~~~l~~al~g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~-S~~ 63 (258)
...+++++-||+. +...+.+.-..+|.|||.++..+ +.+++.+++.|...+ +|.+.+ |+.
T Consensus 58 ~~~ri~vv~gDl~e~~lGL~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsi 136 (382)
T COG3320 58 SADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSI 136 (382)
T ss_pred hcceEEEEecccccccCCCCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeee
Confidence 3567999999987 45566777778999999997532 788999999998876 898888 765
Q ss_pred CCCCCC----------------CCCCCCCccchhhHHHHHHHHHh---CCCCeEEEecCcccccC
Q 025054 64 GSNVDA----------------GHPIEPAKSGYARKAKIRRAIEA---EGIPHTYVSCNCSFGFF 109 (258)
Q Consensus 64 ~~~~~~----------------~~~~~~~~~~~~~k~~~e~~l~~---~~~~~t~lr~~~~~~~~ 109 (258)
+..... ........+|..||..+|..+++ .|++++|+|||++.+..
T Consensus 137 sv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds 201 (382)
T COG3320 137 SVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDS 201 (382)
T ss_pred eeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccC
Confidence 431110 11122457899999999999987 58999999999999854
No 102
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.63 E-value=4.9e-07 Score=72.87 Aligned_cols=152 Identities=17% Similarity=0.130 Sum_probs=95.3
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------h----hchHHHHHHHHHhCC
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------V----EDQFKLIAAIKEVGN 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~----~~~~~li~aa~~~g~ 54 (258)
.+.++.+|+.|++++.++++ +.|+|||+++... + ...+.++.++++.+
T Consensus 54 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~- 132 (251)
T PRK07231 54 RAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG- 132 (251)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-
Confidence 36789999999999988775 4699999997521 1 23445555555566
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
.++||. |+.+..... ++...|..+|...+.+.+. .++.++.++||++...+........ ......
T Consensus 133 ~~~iv~~sS~~~~~~~----~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~---~~~~~~ 205 (251)
T PRK07231 133 GGAIVNVASTAGLRPR----PGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEP---TPENRA 205 (251)
T ss_pred CcEEEEEcChhhcCCC----CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhccc---ChHHHH
Confidence 788998 766543221 2244566799888766653 3899999999998776543221100 000000
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP 166 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g 166 (258)
.+. .......+++++|+|+++..++.++. . .|..+.+.|
T Consensus 206 ~~~-~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g 246 (251)
T PRK07231 206 KFL-ATIPLGRLGTPEDIANAALFLASDEASWITGVTLVVDG 246 (251)
T ss_pred HHh-cCCCCCCCcCHHHHHHHHHHHhCccccCCCCCeEEECC
Confidence 010 11112346899999999999997653 2 356666654
No 103
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.61 E-value=4e-07 Score=73.99 Aligned_cols=156 Identities=13% Similarity=0.088 Sum_probs=93.9
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-c-------------------hhchHHHHHHH----HHhCC
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-E-------------------VEDQFKLIAAI----KEVGN 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-~-------------------~~~~~~li~aa----~~~g~ 54 (258)
.+.++.+|++|++++.++++ ++|+|||+++.. . +....++++++ +..+
T Consensus 59 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~- 137 (264)
T PRK12829 59 KVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG- 137 (264)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-
Confidence 35788999999998887764 689999999854 1 23344455544 4444
Q ss_pred c-cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054 55 I-KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN 125 (258)
Q Consensus 55 v-k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~ 125 (258)
. ++++. |+...... .+....|..+|...+.+++. .+++++++|||++++..................
T Consensus 138 ~~~~vv~~ss~~~~~~----~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~ 213 (264)
T PRK12829 138 HGGVIIALSSVAGRLG----YPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGL 213 (264)
T ss_pred CCeEEEEecccccccC----CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCCh
Confidence 5 56666 55433221 11234577799998877654 489999999999988654321100000000000
Q ss_pred eEecc---CCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcC
Q 025054 126 ILFYG---DGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRP 166 (258)
Q Consensus 126 ~~~~g---~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g 166 (258)
..... .......+++++|+|+++..++... ...++.+++.|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~ 259 (264)
T PRK12829 214 DEMEQEYLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDG 259 (264)
T ss_pred hHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCC
Confidence 00000 0001124899999999999988653 23577888875
No 104
>PRK08017 oxidoreductase; Provisional
Probab=98.61 E-value=5.9e-07 Score=72.67 Aligned_cols=141 Identities=15% Similarity=0.087 Sum_probs=91.3
Q ss_pred CceeEEeccCCCHHHHHHhhC--------CCcEEEEccCccc-------------------h----hchHHHHHHHHHhC
Q 025054 5 INCLIAQGDLHDHESLVKAIK--------PVDVVISAVGRTE-------------------V----EDQFKLIAAIKEVG 53 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~--------g~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g 53 (258)
.+++.+.+|+.|.+++.++++ ++|.++|+++... + ...+.+++++++.+
T Consensus 45 ~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 124 (256)
T PRK08017 45 LGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG 124 (256)
T ss_pred CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC
Confidence 467889999999887766553 4688999987421 1 12234677777787
Q ss_pred CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH-------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054 54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE-------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN 125 (258)
Q Consensus 54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~ 125 (258)
.+++|. |+....... +...+|..+|...+.+.+ ..++++++++||.+...+....... ...
T Consensus 125 -~~~iv~~ss~~~~~~~----~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~------~~~ 193 (256)
T PRK08017 125 -EGRIVMTSSVMGLIST----PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQT------QSD 193 (256)
T ss_pred -CCEEEEEcCcccccCC----CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccch------hhc
Confidence 788887 654332211 234567779999987643 3689999999998876654322110 001
Q ss_pred eEeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR 156 (258)
Q Consensus 126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~ 156 (258)
..+...+.....+++++|+++++..++..++
T Consensus 194 ~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~ 224 (256)
T PRK08017 194 KPVENPGIAARFTLGPEAVVPKLRHALESPK 224 (256)
T ss_pred cchhhhHHHhhcCCCHHHHHHHHHHHHhCCC
Confidence 1112223334557999999999999998764
No 105
>PRK07775 short chain dehydrogenase; Provisional
Probab=98.60 E-value=4.3e-07 Score=74.44 Aligned_cols=151 Identities=15% Similarity=0.107 Sum_probs=91.5
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v 55 (258)
.+.++.+|++|.+++.++++ +.|+|||+++... +....++++++. +.+ .
T Consensus 60 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~ 138 (274)
T PRK07775 60 EAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-R 138 (274)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C
Confidence 36678899999999887775 5799999997531 233344555543 344 5
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.+||. |+....... +....|..+|+..+.+++. .|+.++++|||.+................ .....
T Consensus 139 g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~-~~~~~ 213 (274)
T PRK07775 139 GDLIFVGSDVALRQR----PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPM-LEDWA 213 (274)
T ss_pred ceEEEECChHhcCCC----CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHH-HHHHH
Confidence 67887 654332211 1234577799999987754 38999999999876543211100000000 00011
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEE
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYL 164 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l 164 (258)
.++ +.....+++++|+|+++..+++.+. .+..+++
T Consensus 214 ~~~-~~~~~~~~~~~dva~a~~~~~~~~~-~~~~~~~ 248 (274)
T PRK07775 214 KWG-QARHDYFLRASDLARAITFVAETPR-GAHVVNM 248 (274)
T ss_pred Hhc-ccccccccCHHHHHHHHHHHhcCCC-CCCeeEE
Confidence 111 1223458999999999999998763 3445555
No 106
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.58 E-value=1.1e-06 Score=70.45 Aligned_cols=148 Identities=20% Similarity=0.205 Sum_probs=92.0
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v 55 (258)
.+.++.+|+.|.+++.++++ ++|+|||+++... +....++++++. +.+ .
T Consensus 56 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 134 (248)
T PRK05557 56 KALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-S 134 (248)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C
Confidence 46778899999998888765 5799999997521 223344555554 445 6
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
+++|+ |+.+..... +....|..+|...+.+++. .++.+++++||.+.......... . .......
T Consensus 135 ~~~v~iss~~~~~~~----~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~-~---~~~~~~~ 206 (248)
T PRK05557 135 GRIINISSVVGLMGN----PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPE-D---VKEAILA 206 (248)
T ss_pred eEEEEEcccccCcCC----CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccCh-H---HHHHHHh
Confidence 78888 665443221 1244577789888766542 58999999999886544322100 0 0000000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g 166 (258)
. .....+.+.+|++.++..++... ...++.+++.|
T Consensus 207 --~--~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~ 243 (248)
T PRK05557 207 --Q--IPLGRLGQPEEIASAVAFLASDEAAYITGQTLHVNG 243 (248)
T ss_pred --c--CCCCCCcCHHHHHHHHHHHcCcccCCccccEEEecC
Confidence 0 01113578999999999888763 23467888875
No 107
>PRK05876 short chain dehydrogenase; Provisional
Probab=98.58 E-value=1.8e-06 Score=70.80 Aligned_cols=167 Identities=16% Similarity=0.031 Sum_probs=99.1
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCcc
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIK 56 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk 56 (258)
+.++.+|++|.+++.++++ ++|+|||+++... +.+..++++++ .+.++..
T Consensus 57 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g 136 (275)
T PRK05876 57 VHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGG 136 (275)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCC
Confidence 6678999999998887765 4799999997421 22334555554 3443235
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHH----H---hCCCCeEEEecCcccccCcCCCCCCCCCC-CCCCceE
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAI----E---AEGIPHTYVSCNCSFGFFLPTMAQPGATA-PPRENIL 127 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l----~---~~~~~~t~lr~~~~~~~~~~~~~~~~~~~-~~~~~~~ 127 (258)
++|. |+...... .++...|..+|..++.+. . ..++.+++++||.+...+........... .......
T Consensus 137 ~iv~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~ 212 (275)
T PRK05876 137 HVVFTASFAGLVP----NAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTG 212 (275)
T ss_pred EEEEeCChhhccC----CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCcccccccccc
Confidence 7887 65433221 123456777998754333 2 25899999999988776543211100000 0011112
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHh
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKI 184 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~ 184 (258)
..+.......+++++|+|+.++.++..+ +.+.+.+ .....++.+.+.+..
T Consensus 213 ~~~~~~~~~~~~~~~dva~~~~~ai~~~----~~~~~~~---~~~~~~~~~~~~~~~ 262 (275)
T PRK05876 213 SPGPLPLQDDNLGVDDIAQLTADAILAN----RLYVLPH---AASRASIRRRFERID 262 (275)
T ss_pred ccccccccccCCCHHHHHHHHHHHHHcC----CeEEecC---hhhHHHHHHHHHHHH
Confidence 2333344566899999999999998654 3455542 455566666665544
No 108
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.56 E-value=1.2e-06 Score=70.71 Aligned_cols=152 Identities=9% Similarity=-0.016 Sum_probs=94.0
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC-CccEEE
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG-NIKRFF 59 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g-~vk~~v 59 (258)
+.++.+|+++.+++.++++ +.|+|||+++... +....++++++.+.- ...+||
T Consensus 58 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv 137 (252)
T PRK06077 58 GIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIV 137 (252)
T ss_pred eEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEE
Confidence 4577899999988877655 6799999998421 223445556555431 124677
Q ss_pred c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCC
Q 025054 60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDG 132 (258)
Q Consensus 60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g 132 (258)
. |+..... +.++...|..+|+.++.+++. .++.+.+++||++.+.....+.... ...... .....
T Consensus 138 ~~sS~~~~~----~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~--~~~~~~--~~~~~ 209 (252)
T PRK06077 138 NIASVAGIR----PAYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVL--GMSEKE--FAEKF 209 (252)
T ss_pred EEcchhccC----CCCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcc--cccHHH--HHHhc
Confidence 7 5543321 122345677799998877764 3688999999988765432211100 000000 00111
Q ss_pred CceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054 133 QPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP 166 (258)
Q Consensus 133 ~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g 166 (258)
.....+++++|+|+++..++..+...|+.|++.+
T Consensus 210 ~~~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~~ 243 (252)
T PRK06077 210 TLMGKILDPEEVAEFVAAILKIESITGQVFVLDS 243 (252)
T ss_pred CcCCCCCCHHHHHHHHHHHhCccccCCCeEEecC
Confidence 1122579999999999999986655688899885
No 109
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=98.56 E-value=4.9e-07 Score=70.05 Aligned_cols=181 Identities=12% Similarity=0.110 Sum_probs=121.8
Q ss_pred EEeccCCCHHHHHHhhC--CCcEEEEccCc------c--------chhchHHHHHHHHHhCCccEEEcCCCCCCCCCC--
Q 025054 9 IAQGDLHDHESLVKAIK--PVDVVISAVGR------T--------EVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAG-- 70 (258)
Q Consensus 9 ~~~~D~~d~~~l~~al~--g~d~Vi~~~~~------~--------~~~~~~~li~aa~~~g~vk~~v~S~~~~~~~~~-- 70 (258)
++..|+.|...|.+..- ..|-+||..+. . ++.+..|+++.|++.+ .+.||+|+.|+--...
T Consensus 91 yIy~DILD~K~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k-L~iFVPSTIGAFGPtSPR 169 (366)
T KOG2774|consen 91 YIYLDILDQKSLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK-LKVFVPSTIGAFGPTSPR 169 (366)
T ss_pred chhhhhhccccHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC-eeEeecccccccCCCCCC
Confidence 34567777777777653 46777776432 1 1678899999999999 9999998877632111
Q ss_pred CC------CCCCccchhhHHHHHHH---HH-hCCCCeEEEecCcccccCcCCCC--CCC---C-CCCCCCceEeccCCCc
Q 025054 71 HP------IEPAKSGYARKAKIRRA---IE-AEGIPHTYVSCNCSFGFFLPTMA--QPG---A-TAPPRENILFYGDGQP 134 (258)
Q Consensus 71 ~~------~~~~~~~~~~k~~~e~~---l~-~~~~~~t~lr~~~~~~~~~~~~~--~~~---~-~~~~~~~~~~~g~g~~ 134 (258)
.+ ..|..-|.-+|.-+|-+ .. .-|+++.++|...++.+--+... .+. + .++.+++..-+-.++.
T Consensus 170 NPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdt 249 (366)
T KOG2774|consen 170 NPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDT 249 (366)
T ss_pred CCCCCeeeecCceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCc
Confidence 00 11233344477766633 22 25899999998777765322211 000 0 1234555666666789
Q ss_pred eeeeeccchHHHHHHHHhcCC--CCCCceEEEcCCCCccCHHHHHHHHHHHh-CCcceeEe
Q 025054 135 KAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRPPKNIYSFKELVALWEKKI-GKTLEKIY 192 (258)
Q Consensus 135 ~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g~~~~~t~~e~~~~~~~~~-g~~~~~~~ 192 (258)
+.++.+.+|+-+++...+..+ ....+.||++| -..|..|+++.+.+.. |..+.|..
T Consensus 250 rlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt~--~sftpee~~~~~~~~~p~~~i~y~~ 308 (366)
T KOG2774|consen 250 RLPMMYDTDCMASVIQLLAADSQSLKRRTYNVTG--FSFTPEEIADAIRRVMPGFEIDYDI 308 (366)
T ss_pred cCceeehHHHHHHHHHHHhCCHHHhhhheeeece--eccCHHHHHHHHHhhCCCceeeccc
Confidence 999999999999999988876 34678999995 5899999999999987 34455543
No 110
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.55 E-value=9.4e-07 Score=70.96 Aligned_cols=151 Identities=14% Similarity=0.140 Sum_probs=95.8
Q ss_pred ceeEEeccCCCHHHHHHhhC---CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCccEEE
Q 025054 6 NCLIAQGDLHDHESLVKAIK---PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNIKRFF 59 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~vk~~v 59 (258)
+++++.+|++|.+++.++++ ++|+|||+++... +....++++++.+ .+...++|
T Consensus 54 ~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv 133 (245)
T PRK07060 54 GCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIV 133 (245)
T ss_pred CCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEE
Confidence 56788999999998888876 4899999997521 2334455565543 22136788
Q ss_pred c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccC
Q 025054 60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD 131 (258)
Q Consensus 60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 131 (258)
+ |+....... +....|..+|..++.+++. .+++++.+|||.+.+++.... +. ... ....+..
T Consensus 134 ~~sS~~~~~~~----~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~--~~--~~~-~~~~~~~- 203 (245)
T PRK07060 134 NVSSQAALVGL----PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEA--WS--DPQ-KSGPMLA- 203 (245)
T ss_pred EEccHHHcCCC----CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhh--cc--CHH-HHHHHHh-
Confidence 7 665433221 2345677899999887653 479999999999988653211 00 000 0000000
Q ss_pred CCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 132 GQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 132 g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
......+++.+|+|+++..++..+. ..|+.+++.|
T Consensus 204 ~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~ 240 (245)
T PRK07060 204 AIPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDG 240 (245)
T ss_pred cCCCCCCCCHHHHHHHHHHHcCcccCCccCcEEeECC
Confidence 0111347899999999999998763 2477777764
No 111
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=98.54 E-value=9.3e-07 Score=71.57 Aligned_cols=149 Identities=14% Similarity=0.180 Sum_probs=94.5
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCcc
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNIK 56 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~vk 56 (258)
+.++.+|+.|.+++.++++ +.|+|||+++... +.+..++++++.+ .+ .+
T Consensus 61 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g 139 (255)
T PRK07523 61 AHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AG 139 (255)
T ss_pred EEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-Ce
Confidence 6778899999998888775 4799999997531 2334455565543 45 67
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
++|. |+...... .+....|..+|..++.+.+. .|+++++|+||.+.+.+........ . ....
T Consensus 140 ~iv~iss~~~~~~----~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~----~--~~~~ 209 (255)
T PRK07523 140 KIINIASVQSALA----RPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADP----E--FSAW 209 (255)
T ss_pred EEEEEccchhccC----CCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCH----H--HHHH
Confidence 8888 66543221 12345667799998877653 5899999999998886543211000 0 0000
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.........+..++|+|.++..++.+.. -.|+.+++.|
T Consensus 210 ~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~g 249 (255)
T PRK07523 210 LEKRTPAGRWGKVEELVGACVFLASDASSFVNGHVLYVDG 249 (255)
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECC
Confidence 0011111236789999999999997642 2367788875
No 112
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.54 E-value=8.5e-07 Score=72.48 Aligned_cols=139 Identities=17% Similarity=0.148 Sum_probs=88.4
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v 55 (258)
.+.++.+|+.|.+++.++++ +.|+|||+++... +...+.++..+++.+ .
T Consensus 50 ~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~ 128 (270)
T PRK05650 50 DGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-S 128 (270)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-C
Confidence 46778999999988887765 6899999998531 122344556667777 7
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+...... .+....|..+|+..+.+.+. .++.+++++||.+..++...+.... .. ...
T Consensus 129 ~~iv~vsS~~~~~~----~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~--~~~ 199 (270)
T PRK05650 129 GRIVNIASMAGLMQ----GPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPN---PA--MKA 199 (270)
T ss_pred CEEEEECChhhcCC----CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCc---hh--HHH
Confidence 88887 66543221 12234566799987655432 5899999999999887654321100 00 000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
... ......+++++|+|+.++.++.+.
T Consensus 200 ~~~-~~~~~~~~~~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 200 QVG-KLLEKSPITAADIADYIYQQVAKG 226 (270)
T ss_pred HHH-HHhhcCCCCHHHHHHHHHHHHhCC
Confidence 000 011224679999999999999764
No 113
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.54 E-value=4.1e-06 Score=66.89 Aligned_cols=139 Identities=22% Similarity=0.188 Sum_probs=91.1
Q ss_pred CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH---hCCc
Q 025054 5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE---VGNI 55 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~---~g~v 55 (258)
.++.++.+|+.|.+++.++++ ++|+|||+++... +.....+++++.. .+ .
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~ 132 (237)
T PRK07326 54 GNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG-G 132 (237)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC-C
Confidence 457889999999998887776 6899999987421 2223345555543 34 5
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
+++|. |+...... ......|..+|+.++.+.+. .+++++++|||++.+++..... ..
T Consensus 133 ~~iv~~ss~~~~~~----~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~------~~----- 197 (237)
T PRK07326 133 GYIINISSLAGTNF----FAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP------SE----- 197 (237)
T ss_pred eEEEEECChhhccC----CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc------ch-----
Confidence 67887 65433211 12234566788877655543 5899999999998876542210 00
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCC-CCCCceEEEc
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDP-RTLNKTLYLR 165 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~~~~~~~l~ 165 (258)
.....++.+|+++++..++..+ ..+...+.+.
T Consensus 198 ------~~~~~~~~~d~a~~~~~~l~~~~~~~~~~~~~~ 230 (237)
T PRK07326 198 ------KDAWKIQPEDIAQLVLDLLKMPPRTLPSKIEVR 230 (237)
T ss_pred ------hhhccCCHHHHHHHHHHHHhCCccccccceEEe
Confidence 0011378999999999999887 3566666665
No 114
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.54 E-value=1.1e-06 Score=70.81 Aligned_cols=148 Identities=14% Similarity=0.140 Sum_probs=95.2
Q ss_pred ceeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v 55 (258)
.+.++.+|+.|.+++.++++. .|+|||+++... +.....+++++.. .+ .
T Consensus 57 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 135 (247)
T PRK12935 57 DVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-E 135 (247)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C
Confidence 377799999999998888764 699999998521 2334455555543 44 4
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|+ |+....... ++..+|..+|...+.+.+. .++.+++++||.+...+..... ......
T Consensus 136 ~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~-------~~~~~~ 204 (247)
T PRK12935 136 GRIISISSIIGQAGG----FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVP-------EEVRQK 204 (247)
T ss_pred cEEEEEcchhhcCCC----CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhcc-------HHHHHH
Confidence 67887 665332221 2345677899987766543 4899999999988765432210 000000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC-CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l~g 166 (258)
+. .+.....+.+++|++++++.++.... ..|+.+++.|
T Consensus 205 ~~-~~~~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~ 243 (247)
T PRK12935 205 IV-AKIPKKRFGQADEIAKGVVYLCRDGAYITGQQLNING 243 (247)
T ss_pred HH-HhCCCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCC
Confidence 10 11223357899999999999987543 3578888875
No 115
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.54 E-value=2.7e-06 Score=68.13 Aligned_cols=130 Identities=16% Similarity=0.162 Sum_probs=86.1
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v 55 (258)
.+.++.+|++|++++.++++ ++|+|||+++... +....++++++ ++.+ .
T Consensus 57 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 135 (239)
T PRK07666 57 KVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-S 135 (239)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-C
Confidence 47788999999999888876 7899999987531 12223444444 3456 6
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH-------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE-------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
+++|. |+....... ++...|..+|..++.+++ ..+++++++|||.+.+.+...... .
T Consensus 136 ~~iv~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~----- 200 (239)
T PRK07666 136 GDIINISSTAGQKGA----AVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGL------T----- 200 (239)
T ss_pred cEEEEEcchhhccCC----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhccc------c-----
Confidence 78887 654432221 123456678988776654 258999999999988764322100 0
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
. .....+++.+|+|+++..++..+
T Consensus 201 --~--~~~~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 201 --D--GNPDKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred --c--cCCCCCCCHHHHHHHHHHHHhCC
Confidence 0 01123578999999999999876
No 116
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.54 E-value=2.2e-06 Score=68.92 Aligned_cols=146 Identities=14% Similarity=0.132 Sum_probs=95.0
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH-----HhCC
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK-----EVGN 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~-----~~g~ 54 (258)
.+.++.+|+.|.+++.++++ ++|.|||+++... .....++++++. +.+
T Consensus 60 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~- 138 (249)
T PRK12827 60 KALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR- 138 (249)
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-
Confidence 46789999999999888774 5899999997521 344567777776 455
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
.+++|. |+.+..... ++...|..+|...+.+++. .+++++++|||++.+.+...... . ..+
T Consensus 139 ~~~iv~~sS~~~~~~~----~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~------~-~~~ 207 (249)
T PRK12827 139 GGRIVNIASVAGVRGN----RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAP------T-EHL 207 (249)
T ss_pred CeEEEEECCchhcCCC----CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccch------H-HHH
Confidence 778887 665443221 1345677799887766543 48999999999998865332110 0 000
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
... .....+.+.+|+++++..++.+.. ..++.+.+.|
T Consensus 208 --~~~-~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~ 246 (249)
T PRK12827 208 --LNP-VPVQRLGEPDEVAALVAFLVSDAASYVTGQVIPVDG 246 (249)
T ss_pred --Hhh-CCCcCCcCHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence 000 001124588999999999887642 2366777764
No 117
>PRK09135 pteridine reductase; Provisional
Probab=98.53 E-value=1.1e-06 Score=70.59 Aligned_cols=154 Identities=15% Similarity=0.091 Sum_probs=95.0
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHh--CCccE
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEV--GNIKR 57 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~--g~vk~ 57 (258)
.+.++.+|++|.+++.++++ ++|+|||+++... +.+..++++++... .+-.+
T Consensus 58 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~ 137 (249)
T PRK09135 58 SAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGA 137 (249)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeE
Confidence 47789999999999888776 4799999998410 45667888888542 10134
Q ss_pred EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054 58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG 130 (258)
Q Consensus 58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 130 (258)
++. ++.... .+.++...|..+|+.+|.+++. .++.++++|||++++....... .. ..... ...
T Consensus 138 ~~~~~~~~~~----~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~-~~---~~~~~--~~~ 207 (249)
T PRK09135 138 IVNITDIHAE----RPLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSF-DE---EARQA--ILA 207 (249)
T ss_pred EEEEeChhhc----CCCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccC-CH---HHHHH--HHh
Confidence 554 433221 1223456778899999988864 3689999999999986532110 00 00000 000
Q ss_pred CCCceeeeeccchHHHHHHHHhcCC-CCCCceEEEcCCCCcc
Q 025054 131 DGQPKAIFNKEEDIATYTIKAVDDP-RTLNKTLYLRPPKNIY 171 (258)
Q Consensus 131 ~g~~~~~~v~~~D~a~~~~~~l~~~-~~~~~~~~l~g~~~~~ 171 (258)
+.....+.+++|+++++..++.+. ...|+.|++.+ +..+
T Consensus 208 -~~~~~~~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~-g~~~ 247 (249)
T PRK09135 208 -RTPLKRIGTPEDIAEAVRFLLADASFITGQILAVDG-GRSL 247 (249)
T ss_pred -cCCcCCCcCHHHHHHHHHHHcCccccccCcEEEECC-Ceec
Confidence 000011235799999997766543 24678899986 4333
No 118
>PRK06194 hypothetical protein; Provisional
Probab=98.53 E-value=4.9e-06 Score=68.54 Aligned_cols=157 Identities=8% Similarity=0.017 Sum_probs=97.0
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHH----HHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFK----LIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~----li~aa~~~g~v 55 (258)
.+.++.+|++|.+++.++++ ++|+|||+++... +.+..+ ++...++++ .
T Consensus 56 ~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~ 134 (287)
T PRK06194 56 EVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAA-E 134 (287)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-C
Confidence 36679999999999988876 4799999998531 122333 333355555 3
Q ss_pred ------cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh---------CCCCeEEEecCcccccCcCCCCCCCCC
Q 025054 56 ------KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA---------EGIPHTYVSCNCSFGFFLPTMAQPGAT 119 (258)
Q Consensus 56 ------k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~t~lr~~~~~~~~~~~~~~~~~~ 119 (258)
.++|. |+.+..... ++..+|..+|+.++.+.+. .++.+..+.||.+...+...
T Consensus 135 ~~~~~~g~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~------- 203 (287)
T PRK06194 135 KDPAYEGHIVNTASMAGLLAP----PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS------- 203 (287)
T ss_pred CCCCCCeEEEEeCChhhccCC----CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc-------
Confidence 47777 665433221 2345677799999877753 23666777776655443321
Q ss_pred CCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEe
Q 025054 120 APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIY 192 (258)
Q Consensus 120 ~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~ 192 (258)
...+...+.++|.+.+++++++|........ + .+|..|+++.+.+.++..-.+..
T Consensus 204 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~-~~s~~dva~~i~~~~~~~~~~~~ 258 (287)
T PRK06194 204 -ERNRPADLANTAPPTRSQLIAQAMSQKAVGS----------------G-KVTAEEVAQLVFDAIRAGRFYIY 258 (287)
T ss_pred -cccCchhcccCccccchhhHHHHHHHhhhhc----------------c-CCCHHHHHHHHHHHHHcCCeEEE
Confidence 1122345566677777888888877654221 1 26788888888887754433333
No 119
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.51 E-value=1.5e-06 Score=69.92 Aligned_cols=152 Identities=17% Similarity=0.199 Sum_probs=93.7
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHH----HHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIA----AIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~----aa~~~g~v 55 (258)
++.++.+|+.|.+++.++++ +.|+|||+++... +....++++ +.++.+ .
T Consensus 53 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 131 (250)
T TIGR03206 53 NAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-A 131 (250)
T ss_pred cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence 47889999999998888765 5899999997421 223334444 444666 7
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce-
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI- 126 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~- 126 (258)
+++|+ |+.+..... +....|..+|+.++.+.+. .++++++++||.+++.+........ .....+
T Consensus 132 ~~ii~iss~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~---~~~~~~~ 204 (250)
T TIGR03206 132 GRIVNIASDAARVGS----SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGA---ENPEKLR 204 (250)
T ss_pred eEEEEECchhhccCC----CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhcc---CChHHHH
Confidence 88887 665443221 1234566799887766653 4899999999999887543321100 000000
Q ss_pred -EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 127 -LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 127 -~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.+... -....+...+|+|+++..++.++. -.|+.+.+.|
T Consensus 205 ~~~~~~-~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~ 246 (250)
T TIGR03206 205 EAFTRA-IPLGRLGQPDDLPGAILFFSSDDASFITGQVLSVSG 246 (250)
T ss_pred HHHHhc-CCccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCC
Confidence 00000 001124578999999999987653 2467888864
No 120
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.50 E-value=1.9e-06 Score=69.35 Aligned_cols=149 Identities=16% Similarity=0.154 Sum_probs=95.0
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v 55 (258)
.++++.+|++|.+++.++++ ++|+|||+++... +....++++++.. .+ .
T Consensus 57 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 135 (250)
T PRK12939 57 RAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-R 135 (250)
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence 47889999999999888774 6899999997521 2334455555543 33 4
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+.+..... +....|..+|..++.+++. .++.++.++||.+..+....... .....
T Consensus 136 g~iv~isS~~~~~~~----~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------~~~~~ 204 (250)
T PRK12939 136 GRIVNLASDTALWGA----PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA-------DERHA 204 (250)
T ss_pred eEEEEECchhhccCC----CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC-------hHHHH
Confidence 58887 664332211 1234567799999877753 47999999999887654322110 00000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
....+.....+++++|+|+++..++..+. -.|+.+.+.|
T Consensus 205 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~g 245 (250)
T PRK12939 205 YYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNG 245 (250)
T ss_pred HHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 01111222347899999999999998652 3578888875
No 121
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.50 E-value=2.4e-06 Score=68.89 Aligned_cols=139 Identities=15% Similarity=0.101 Sum_probs=89.5
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHhCC
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVGN 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g~ 54 (258)
++.++.+|+.|.+++.++++ ++|+|||+++... ....+.++.++++.+
T Consensus 47 ~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~- 125 (248)
T PRK10538 47 NLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN- 125 (248)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence 57788999999998877664 6899999987420 112456666667777
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
..++|. |+.+.... ..+...|..+|..++.+.+. .++.+++++||.+.+.........+ ......
T Consensus 126 ~~~iv~isS~~~~~~----~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~---~~~~~~ 198 (248)
T PRK10538 126 HGHIINIGSTAGSWP----YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG---DDGKAE 198 (248)
T ss_pred CcEEEEECCcccCCC----CCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccC---cHHHHH
Confidence 788887 66544321 12345677799998877654 4799999999998754332110000 000000
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR 156 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~ 156 (258)
..+ . ...++..+|+|+++..++..+.
T Consensus 199 ~~~-~---~~~~~~~~dvA~~~~~l~~~~~ 224 (248)
T PRK10538 199 KTY-Q---NTVALTPEDVSEAVWWVATLPA 224 (248)
T ss_pred hhc-c---ccCCCCHHHHHHHHHHHhcCCC
Confidence 011 1 1235789999999999998764
No 122
>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]
Probab=98.50 E-value=2.3e-06 Score=66.02 Aligned_cols=100 Identities=11% Similarity=0.081 Sum_probs=74.1
Q ss_pred CCCCeEEEecCcccccCcCCCCCCCCC--CCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCc
Q 025054 93 EGIPHTYVSCNCSFGFFLPTMAQPGAT--APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNI 170 (258)
Q Consensus 93 ~~~~~t~lr~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~ 170 (258)
...+.++||.|.+.|.....+...... .-..+ -.|+|++-++|||++|++..+..+|+++. ..+.+|-..|+ .
T Consensus 170 ~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GG---PlGsG~Q~fpWIHv~DL~~li~~ale~~~-v~GViNgvAP~-~ 244 (315)
T KOG3019|consen 170 KDVRVALIRIGVVLGKGGGALAMMILPFQMGAGG---PLGSGQQWFPWIHVDDLVNLIYEALENPS-VKGVINGVAPN-P 244 (315)
T ss_pred cceeEEEEEEeEEEecCCcchhhhhhhhhhccCC---cCCCCCeeeeeeehHHHHHHHHHHHhcCC-CCceecccCCC-c
Confidence 458999999999998654432221100 00111 24789999999999999999999999974 56678888775 9
Q ss_pred cCHHHHHHHHHHHhCCcceeEecCHHHH
Q 025054 171 YSFKELVALWEKKIGKTLEKIYVTEDQI 198 (258)
Q Consensus 171 ~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 198 (258)
.+..|+.+.+.++++++. +..+|...+
T Consensus 245 ~~n~Ef~q~lg~aL~Rp~-~~pvP~fvv 271 (315)
T KOG3019|consen 245 VRNGEFCQQLGSALSRPS-WLPVPDFVV 271 (315)
T ss_pred cchHHHHHHHHHHhCCCc-ccCCcHHHH
Confidence 999999999999999853 446666433
No 123
>PRK08324 short chain dehydrogenase; Validated
Probab=98.49 E-value=1.9e-06 Score=79.47 Aligned_cols=156 Identities=17% Similarity=0.128 Sum_probs=98.2
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v 55 (258)
++.++.+|++|.+++.++++ +.|+|||+++... +.+..++++++ ++.+ .
T Consensus 471 ~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~ 549 (681)
T PRK08324 471 RALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG-L 549 (681)
T ss_pred cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence 57789999999998887765 6899999998421 22344554444 4444 4
Q ss_pred -cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCccc-ccCc--CCCCCCCC--CCC
Q 025054 56 -KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSF-GFFL--PTMAQPGA--TAP 121 (258)
Q Consensus 56 -k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~-~~~~--~~~~~~~~--~~~ 121 (258)
.+||. |+....... +....|..+|+..+.+++. .++.++.|+|+.++ +... +.+..... ...
T Consensus 550 ~g~iV~vsS~~~~~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~ 625 (681)
T PRK08324 550 GGSIVFIASKNAVNPG----PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGL 625 (681)
T ss_pred CcEEEEECCccccCCC----CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccC
Confidence 57777 665433221 1245677799999988764 36999999999997 4321 11100000 000
Q ss_pred CCCc-eEeccCCCceeeeeccchHHHHHHHHhcC--CCCCCceEEEcC
Q 025054 122 PREN-ILFYGDGQPKAIFNKEEDIATYTIKAVDD--PRTLNKTLYLRP 166 (258)
Q Consensus 122 ~~~~-~~~~g~g~~~~~~v~~~D~a~~~~~~l~~--~~~~~~~~~l~g 166 (258)
.... ...++.++....+++.+|+|+++..++.. ....|+.+++.|
T Consensus 626 ~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdg 673 (681)
T PRK08324 626 SEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDG 673 (681)
T ss_pred ChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence 0000 01234455556789999999999998853 334678898876
No 124
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.46 E-value=3.6e-06 Score=67.10 Aligned_cols=149 Identities=17% Similarity=0.115 Sum_probs=92.8
Q ss_pred eeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCccE
Q 025054 7 CLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIKR 57 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk~ 57 (258)
.+++.+|++|.+++.++++ +.|+|||+++... ....+.++.++++.+ ..+
T Consensus 43 ~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ 121 (234)
T PRK07577 43 GELFACDLADIEQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGR 121 (234)
T ss_pred ceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcE
Confidence 3678899999998887776 6899999987521 122345566667777 788
Q ss_pred EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054 58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY 129 (258)
Q Consensus 58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (258)
+|. |+.+.. .. +...+|..+|..++.+.+. .++.+++|+||.+......... .. .......+.
T Consensus 122 iv~~sS~~~~-~~----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~-~~---~~~~~~~~~ 192 (234)
T PRK07577 122 IVNICSRAIF-GA----LDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTR-PV---GSEEEKRVL 192 (234)
T ss_pred EEEEcccccc-CC----CCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccccccc-cc---chhHHHHHh
Confidence 888 665421 11 1245677799998876643 5899999999998876532210 00 000000000
Q ss_pred cCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 130 GDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 130 g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.. .....+...+|+|.++..++.++. ..|..+.+.|
T Consensus 193 ~~-~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g 230 (234)
T PRK07577 193 AS-IPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDG 230 (234)
T ss_pred hc-CCCCCCcCHHHHHHHHHHHhCcccCCccceEEEecC
Confidence 00 000114578999999999997752 2466676664
No 125
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.45 E-value=3.6e-06 Score=67.58 Aligned_cols=148 Identities=13% Similarity=0.122 Sum_probs=91.2
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~v 55 (258)
.+.++.+|++|++++.++++ ++|+|||+++... +....+++.+ .++.+ .
T Consensus 56 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 134 (247)
T PRK05565 56 DAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-S 134 (247)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C
Confidence 47889999999999888776 7899999997531 1222334444 44455 6
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
+++|. |+.+..... +....|..+|...+.+++. .++.++.++||++.......... .. . ...
T Consensus 135 ~~~v~~sS~~~~~~~----~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~-~~---~--~~~ 204 (247)
T PRK05565 135 GVIVNISSIWGLIGA----SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE-ED---K--EGL 204 (247)
T ss_pred cEEEEECCHhhccCC----CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh-HH---H--HHH
Confidence 77887 665433221 1233566688776665543 58999999999887654332110 00 0 000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
... .....+...+|++++++.++.... ..|+.+.+.+
T Consensus 205 ~~~--~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~ 243 (247)
T PRK05565 205 AEE--IPLGRLGKPEEIAKVVLFLASDDASYITGQIITVDG 243 (247)
T ss_pred Hhc--CCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEecC
Confidence 000 111235688999999999987652 3466777764
No 126
>PRK06128 oxidoreductase; Provisional
Probab=98.42 E-value=5.3e-06 Score=68.93 Aligned_cols=150 Identities=17% Similarity=0.151 Sum_probs=94.0
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHHhC-CccEE
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKEVG-NIKRF 58 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~g-~vk~~ 58 (258)
+.++.+|++|.+++.++++ +.|+|||+++... +.+...+++++...- .-.++
T Consensus 108 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~i 187 (300)
T PRK06128 108 AVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASI 187 (300)
T ss_pred EEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEE
Confidence 5678899999988877664 6899999997421 334556777775421 02477
Q ss_pred Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054 59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG 130 (258)
Q Consensus 59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 130 (258)
|. |+....... +....|..+|+.++.+.+. .|+.++.|+||++.+.+...... ........+
T Consensus 188 v~~sS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~------~~~~~~~~~ 257 (300)
T PRK06128 188 INTGSIQSYQPS----PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQ------PPEKIPDFG 257 (300)
T ss_pred EEECCccccCCC----CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCC------CHHHHHHHh
Confidence 77 665433211 1234577799999877653 58999999999998875422100 000011111
Q ss_pred CCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 131 DGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 131 ~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.......+...+|+|.++..++.+.. ..|+.+++.|
T Consensus 258 ~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~g 295 (300)
T PRK06128 258 SETPMKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTG 295 (300)
T ss_pred cCCCCCCCcCHHHHHHHHHHHhCccccCccCcEEeeCC
Confidence 11111235688999999999887653 2477888876
No 127
>PRK09186 flagellin modification protein A; Provisional
Probab=98.42 E-value=2.2e-06 Score=69.32 Aligned_cols=148 Identities=14% Similarity=0.063 Sum_probs=90.7
Q ss_pred ceeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc--------------------------hhchHHHHHHHHHh
Q 025054 6 NCLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE--------------------------VEDQFKLIAAIKEV 52 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~--------------------------~~~~~~li~aa~~~ 52 (258)
.+.++.+|++|++++.++++. .|+|||+++... ....+.++.++++.
T Consensus 56 ~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (256)
T PRK09186 56 KLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ 135 (256)
T ss_pred ceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc
Confidence 356779999999998888763 799999985310 23345666677777
Q ss_pred CCccEEEc-CCCCCCCCC------CCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCC
Q 025054 53 GNIKRFFP-TEYGSNVDA------GHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGA 118 (258)
Q Consensus 53 g~vk~~v~-S~~~~~~~~------~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~ 118 (258)
+ .+++|+ |+....... .........|..+|...+.+.+. .++.+++++||.+.+.....+..
T Consensus 136 ~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~--- 211 (256)
T PRK09186 136 G-GGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLN--- 211 (256)
T ss_pred C-CceEEEEechhhhccccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHH---
Confidence 7 789998 653221110 00011123467799988877642 57999999999876542111000
Q ss_pred CCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054 119 TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP 166 (258)
Q Consensus 119 ~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g 166 (258)
..... .+ ...+++++|+|+++..++++.. . .|+.+.+.|
T Consensus 212 --~~~~~--~~-----~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~ 252 (256)
T PRK09186 212 --AYKKC--CN-----GKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDD 252 (256)
T ss_pred --HHHhc--CC-----ccCCCCHHHhhhhHhheeccccccccCceEEecC
Confidence 00000 01 1247899999999999998652 2 355666553
No 128
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.41 E-value=8e-06 Score=66.02 Aligned_cols=149 Identities=13% Similarity=0.093 Sum_probs=92.8
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hhchHHHHHHHHHh----C
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VEDQFKLIAAIKEV----G 53 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~~----g 53 (258)
++.++.+|++|++++.++++ +.|+|||+++... +....++++++... .
T Consensus 53 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 132 (256)
T PRK12745 53 EVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQP 132 (256)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhcc
Confidence 47889999999988777654 5799999987410 23345565555332 1
Q ss_pred C-----ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCC
Q 025054 54 N-----IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATA 120 (258)
Q Consensus 54 ~-----vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~ 120 (258)
+ ++++|+ |+....... .+...|..+|+.++.+.+. .++++++++||.+.+........ .
T Consensus 133 ~~~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~-~--- 204 (256)
T PRK12745 133 EPEELPHRSIVFVSSVNAIMVS----PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTA-K--- 204 (256)
T ss_pred CcCCCCCcEEEEECChhhccCC----CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccch-h---
Confidence 1 456887 665443221 2345677899999876653 57999999999888754322110 0
Q ss_pred CCCCceEeccCCCc-eeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 121 PPRENILFYGDGQP-KAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 121 ~~~~~~~~~g~g~~-~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
. ...+. .+.. ...+.+.+|+++++..++.... ..|+.+++.|
T Consensus 205 ~-~~~~~---~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~g 249 (256)
T PRK12745 205 Y-DALIA---KGLVPMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDG 249 (256)
T ss_pred H-Hhhhh---hcCCCcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECC
Confidence 0 00000 0000 1236689999999999886542 2477888875
No 129
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.41 E-value=4.6e-06 Score=67.27 Aligned_cols=156 Identities=14% Similarity=0.080 Sum_probs=93.9
Q ss_pred ceeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v 55 (258)
.+..+++|+.|.+++.+++++ .|+|||+++... +.....+++++ ++.+ .
T Consensus 49 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 127 (252)
T PRK08220 49 PFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-S 127 (252)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-C
Confidence 477889999999998887763 799999987531 22333455554 3445 5
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCC--CCCCCCc
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGA--TAPPREN 125 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~--~~~~~~~ 125 (258)
.++|. |+.+.... .++...|..+|...+.+.+. .++.+++++||.+.+.....+..... .......
T Consensus 128 g~iv~~ss~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~ 203 (252)
T PRK08220 128 GAIVTVGSNAAHVP----RIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGF 203 (252)
T ss_pred CEEEEECCchhccC----CCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhH
Confidence 67887 66544321 12345577799998877643 57999999999998865432110000 0000000
Q ss_pred eEeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
......+.....+++++|+|+++..++.+. . -.++.+.+.|
T Consensus 204 ~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~g 246 (252)
T PRK08220 204 PEQFKLGIPLGKIARPQEIANAVLFLASDLASHITLQDIVVDG 246 (252)
T ss_pred HHHHhhcCCCcccCCHHHHHHHHHHHhcchhcCccCcEEEECC
Confidence 000001111234789999999999998764 2 2456666654
No 130
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=98.41 E-value=4.6e-06 Score=67.05 Aligned_cols=147 Identities=15% Similarity=0.159 Sum_probs=92.7
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK 56 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk 56 (258)
+.++.+|+.|.+++.++++ ++|+|||+++... +...+.++.++++.+ ..
T Consensus 55 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~ 133 (246)
T PRK12938 55 FIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WG 133 (246)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-Ce
Confidence 4566899999988877664 6899999997531 122455666666777 78
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
++|. |+....... +....|..+|...+.+.+. .++.++.|+||++...+..... . ..+..
T Consensus 134 ~iv~isS~~~~~~~----~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~-~-------~~~~~ 201 (246)
T PRK12938 134 RIINISSVNGQKGQ----FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR-P-------DVLEK 201 (246)
T ss_pred EEEEEechhccCCC----CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC-h-------HHHHH
Confidence 8887 654332221 1244566799987765543 5899999999988776543210 0 00000
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
.........+.+.+|++.++..++.++ . ..+..+.+.|
T Consensus 202 ~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~ 241 (246)
T PRK12938 202 IVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNG 241 (246)
T ss_pred HHhcCCccCCcCHHHHHHHHHHHcCcccCCccCcEEEECC
Confidence 001111223568899999999988764 2 3566777764
No 131
>PRK07041 short chain dehydrogenase; Provisional
Probab=98.41 E-value=2.6e-06 Score=67.77 Aligned_cols=153 Identities=12% Similarity=0.025 Sum_probs=95.1
Q ss_pred CceeEEeccCCCHHHHHHhhCC---CcEEEEccCccc-------------------hhchHHHHHHHHHhCCccEEEc-C
Q 025054 5 INCLIAQGDLHDHESLVKAIKP---VDVVISAVGRTE-------------------VEDQFKLIAAIKEVGNIKRFFP-T 61 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g---~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~vk~~v~-S 61 (258)
.+++++.+|++|.+++.++++. +|++||.++... +....+++++....+ ..++|. |
T Consensus 45 ~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~s 123 (230)
T PRK07041 45 APVRTAALDITDEAAVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVS 123 (230)
T ss_pred CceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEEC
Confidence 3578899999999999998874 699999987421 223345666555555 678888 6
Q ss_pred CCCCCCCCCCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCcee
Q 025054 62 EYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKA 136 (258)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~ 136 (258)
+.+.... .++...|..+|+.++.+.+. .++..+.++||++-..+........ ....+......-...
T Consensus 124 s~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~----~~~~~~~~~~~~~~~ 195 (230)
T PRK07041 124 GFAAVRP----SASGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDA----REAMFAAAAERLPAR 195 (230)
T ss_pred chhhcCC----CCcchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccc----hHHHHHHHHhcCCCC
Confidence 6554322 12345677799999888765 3578899999887654432111000 000000000000001
Q ss_pred eeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054 137 IFNKEEDIATYTIKAVDDPRTLNKTLYLRP 166 (258)
Q Consensus 137 ~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g 166 (258)
.+...+|+|+++..++.++...|+.+++.|
T Consensus 196 ~~~~~~dva~~~~~l~~~~~~~G~~~~v~g 225 (230)
T PRK07041 196 RVGQPEDVANAILFLAANGFTTGSTVLVDG 225 (230)
T ss_pred CCcCHHHHHHHHHHHhcCCCcCCcEEEeCC
Confidence 234679999999999987544578888875
No 132
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.40 E-value=7.7e-06 Score=66.46 Aligned_cols=138 Identities=12% Similarity=0.088 Sum_probs=87.4
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHH---hCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKE---VGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~---~g~v 55 (258)
++.++.+|+.|.+++.++++ +.|+|||+++... +....++++++.. .+ .
T Consensus 51 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~ 129 (263)
T PRK06181 51 EALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-R 129 (263)
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-C
Confidence 46788999999998887765 6899999987522 2233455566532 23 4
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+....... ++...|..+|..++.+.+. .++.+++++||++...+....... . +. .
T Consensus 130 ~~iv~~sS~~~~~~~----~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~-----~-~~-~ 198 (263)
T PRK06181 130 GQIVVVSSLAGLTGV----PTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDG-----D-GK-P 198 (263)
T ss_pred CEEEEEecccccCCC----CCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccc-----c-cc-c
Confidence 67776 554332211 2245677799998877643 589999999999877654321100 0 00 0
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
....+.....+++++|+|+++..+++..
T Consensus 199 ~~~~~~~~~~~~~~~dva~~i~~~~~~~ 226 (263)
T PRK06181 199 LGKSPMQESKIMSAEECAEAILPAIARR 226 (263)
T ss_pred cccccccccCCCCHHHHHHHHHHHhhCC
Confidence 1111122236899999999999999753
No 133
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.40 E-value=4.3e-06 Score=67.10 Aligned_cols=148 Identities=20% Similarity=0.195 Sum_probs=93.1
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v 55 (258)
.+.++.+|+.|.+++.++++ +.|+|||+++... +.. .+.+++++++.+ .
T Consensus 53 ~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 131 (245)
T PRK12824 53 QVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-Y 131 (245)
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-C
Confidence 37889999999998888765 4799999997421 122 334456666667 7
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+.+..... +....|..+|+.++.+++. .++.+++++||++.+........ ....
T Consensus 132 ~~iv~iss~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~--------~~~~ 199 (245)
T PRK12824 132 GRIINISSVNGLKGQ----FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGP--------EVLQ 199 (245)
T ss_pred eEEEEECChhhccCC----CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCH--------HHHH
Confidence 88888 665443221 1233566699877766543 47999999999988754322110 0000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
..........+...+|+++++..++.... -.|+.+++.|
T Consensus 200 ~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~ 240 (245)
T PRK12824 200 SIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETISING 240 (245)
T ss_pred HHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEECC
Confidence 00000111235678999999988886542 2477888875
No 134
>PRK08628 short chain dehydrogenase; Provisional
Probab=98.39 E-value=1.5e-06 Score=70.53 Aligned_cols=162 Identities=10% Similarity=0.069 Sum_probs=97.2
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------hhchHHHHHHHHH---hCCccE
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------VEDQFKLIAAIKE---VGNIKR 57 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------~~~~~~li~aa~~---~g~vk~ 57 (258)
++.++.+|++|.+++.++++ ++|+|||+++... +....++..++.. .+ ..+
T Consensus 56 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~ 134 (258)
T PRK08628 56 RAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS-RGA 134 (258)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcE
Confidence 47789999999999988775 5799999998421 1222334444432 23 357
Q ss_pred EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce-Ee
Q 025054 58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI-LF 128 (258)
Q Consensus 58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 128 (258)
+|. |+....... ++...|..+|+.++.+.+. .++.++.|+||.+++.+...+.. .... ..... .+
T Consensus 135 iv~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~-~~~~~~~~ 208 (258)
T PRK08628 135 IVNISSKTALTGQ----GGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIA-TFDD-PEAKLAAI 208 (258)
T ss_pred EEEECCHHhccCC----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhh-hccC-HHHHHHHH
Confidence 887 665433221 1244677799999877764 47999999999998865432110 0000 00000 00
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcCCCCccCHHHH
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRPPKNIYSFKEL 176 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g~~~~~t~~e~ 176 (258)
.........+++.+|+|+++..++... ...|+.+.+.| + ...++++
T Consensus 209 ~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g-g-~~~~~~~ 256 (258)
T PRK08628 209 TAKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDG-G-YVHLDRA 256 (258)
T ss_pred HhcCCccccCCCHHHHHHHHHHHhChhhccccCceEEecC-C-ccccccc
Confidence 000000113678999999999999765 23467777764 3 4555443
No 135
>PRK07454 short chain dehydrogenase; Provisional
Probab=98.34 E-value=8.4e-06 Score=65.34 Aligned_cols=132 Identities=13% Similarity=0.103 Sum_probs=85.9
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hh----chHHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VE----DQFKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~----~~~~li~aa~~~g~v 55 (258)
++.++.+|++|.+++.++++ ++|+|||+++... +. ..+.++..+++.+ .
T Consensus 56 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~ 134 (241)
T PRK07454 56 KAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-G 134 (241)
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-C
Confidence 57789999999998877765 4799999997421 12 2334444455565 6
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+...... .+...+|..+|..++.+.+. .++++++||||.+....... .. .. ..
T Consensus 135 ~~iv~isS~~~~~~----~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~---~~---~~---~~ 201 (241)
T PRK07454 135 GLIINVSSIAARNA----FPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT---ET---VQ---AD 201 (241)
T ss_pred cEEEEEccHHhCcC----CCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc---cc---cc---cc
Confidence 78887 65543221 12244566799998876542 58999999999876543211 00 00 00
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR 156 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~ 156 (258)
. ....+++.+|+|+++..++.+++
T Consensus 202 -~----~~~~~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 202 -F----DRSAMLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred -c----ccccCCCHHHHHHHHHHHHcCCc
Confidence 0 11236799999999999998773
No 136
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.33 E-value=6.2e-06 Score=66.88 Aligned_cols=156 Identities=12% Similarity=0.058 Sum_probs=91.6
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhch----HHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g~v 55 (258)
.+.++.+|++|.+++.++++ +.|+|||+++... +... +.++..+++.+ .
T Consensus 54 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~ 132 (259)
T PRK12384 54 MAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDG-I 132 (259)
T ss_pred eeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC-C
Confidence 47889999999988877664 5799999997421 2222 23344444444 3
Q ss_pred -cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCc-CC-CCCCCC-CCCC-
Q 025054 56 -KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFL-PT-MAQPGA-TAPP- 122 (258)
Q Consensus 56 -k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~-~~-~~~~~~-~~~~- 122 (258)
.++|+ |+....... +...+|..+|+..+.+++. .|+.++.+|||.+++.-. .. +..... ....
T Consensus 133 ~~~iv~~ss~~~~~~~----~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~ 208 (259)
T PRK12384 133 QGRIIQINSKSGKVGS----KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKP 208 (259)
T ss_pred CcEEEEecCcccccCC----CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCCh
Confidence 37776 554322211 1234677799987665533 689999999998765321 11 000000 0000
Q ss_pred CCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
........++.....+++.+|++.++..++.+.. ..|+.+++.|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~ 254 (259)
T PRK12384 209 DEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTG 254 (259)
T ss_pred HHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcC
Confidence 0001112222233457899999999999887652 2477888875
No 137
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.32 E-value=9.6e-06 Score=65.31 Aligned_cols=146 Identities=12% Similarity=0.059 Sum_probs=92.3
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc----------------------hhchHHHHHHHHH----h
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE----------------------VEDQFKLIAAIKE----V 52 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~----------------------~~~~~~li~aa~~----~ 52 (258)
++..+.+|++|.+++.++++ +.|+|||+++... +....++++++.. .
T Consensus 56 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 135 (250)
T PRK07774 56 TAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKR 135 (250)
T ss_pred cEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHh
Confidence 46678999999998877665 5799999998410 3344556666654 3
Q ss_pred CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054 53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE 124 (258)
Q Consensus 53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~ 124 (258)
+ .+++|. |+.+... +..+|..+|+.++.+++. .++..++++||.+......... +. .
T Consensus 136 ~-~~~iv~~sS~~~~~-------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~------~ 200 (250)
T PRK07774 136 G-GGAIVNQSSTAAWL-------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT-PK------E 200 (250)
T ss_pred C-CcEEEEEecccccC-------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC-CH------H
Confidence 4 468887 6544321 245677899999887754 3789999999988765432210 00 0
Q ss_pred ceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.......+.....+.+++|+++++..++..+. ..|+.+++.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~ 244 (250)
T PRK07774 201 FVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQIFNVDG 244 (250)
T ss_pred HHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcCCCEEEECC
Confidence 00000000001124578999999999887642 3578888876
No 138
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.32 E-value=6.8e-06 Score=65.61 Aligned_cols=147 Identities=14% Similarity=0.141 Sum_probs=90.9
Q ss_pred eeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc-------------------hhchHHHHHHHHH----hCCcc
Q 025054 7 CLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNIK 56 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~vk 56 (258)
+.++.+|++|.+++.+++++ .|.|||+++... +....++++++.. .+ .+
T Consensus 50 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ 128 (239)
T TIGR01830 50 ALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SG 128 (239)
T ss_pred eEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-Ce
Confidence 67889999999998887754 699999998531 2334556666654 45 67
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
++++ |+.+..... +....|..+|...+.+.+. .++.+++++||.+.+........ . .. .. +
T Consensus 129 ~~v~~sS~~~~~g~----~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~-~---~~-~~--~ 197 (239)
T TIGR01830 129 RIINISSVVGLMGN----AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSE-K---VK-KK--I 197 (239)
T ss_pred EEEEECCccccCCC----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcCh-H---HH-HH--H
Confidence 8888 665433221 1234566688877665533 58999999999776543221100 0 00 00 0
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.+.. ....+.+.+|+++++..++..++ ..|+.+++.+
T Consensus 198 ~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~ 236 (239)
T TIGR01830 198 LSQI-PLGRFGTPEEVANAVAFLASDEASYITGQVIHVDG 236 (239)
T ss_pred HhcC-CcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCC
Confidence 0000 01125688999999998886542 3577888863
No 139
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.30 E-value=7.7e-06 Score=65.79 Aligned_cols=150 Identities=14% Similarity=0.114 Sum_probs=90.4
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHHhC----C
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKEVG----N 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~g----~ 54 (258)
.+.++.+|++|.+++.++++ ..|+|||+++... +....++++++...- +
T Consensus 53 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 132 (248)
T PRK06123 53 EALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHG 132 (248)
T ss_pred cEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 36788999999998888776 5799999997531 223345566654321 0
Q ss_pred -c-cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054 55 -I-KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE 124 (258)
Q Consensus 55 -v-k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~ 124 (258)
. .++|. |+......... ....|..+|+.++.+++. .++++++||||.+++.+......+.
T Consensus 133 ~~~g~iv~~sS~~~~~~~~~---~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~------- 202 (248)
T PRK06123 133 GRGGAIVNVSSMAARLGSPG---EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPG------- 202 (248)
T ss_pred CCCeEEEEECchhhcCCCCC---CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHH-------
Confidence 1 24666 66543322110 113577899999886643 4899999999999887532211100
Q ss_pred ceEeccCCCcee-eeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 125 NILFYGDGQPKA-IFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 125 ~~~~~g~g~~~~-~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.+.... +..+. -+.+++|++++++.++.... ..|+.+++.|
T Consensus 203 ~~~~~~-~~~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~g 246 (248)
T PRK06123 203 RVDRVK-AGIPMGRGGTAEEVARAILWLLSDEASYTTGTFIDVSG 246 (248)
T ss_pred HHHHHH-hcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEeecC
Confidence 000000 00011 12468999999999887642 3577888865
No 140
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.30 E-value=1.3e-05 Score=67.58 Aligned_cols=141 Identities=16% Similarity=0.140 Sum_probs=91.1
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK 56 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk 56 (258)
+.++.+|++|.+++.++++ +.|++||+++... +...+.++..+++.+ ..
T Consensus 59 ~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g 137 (334)
T PRK07109 59 ALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RG 137 (334)
T ss_pred EEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-Cc
Confidence 6678999999998887754 6899999997421 223455666667766 67
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh---------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA---------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
++|. |+....... +....|..+|+.++.+.+. .++.++.|+||.+...+....... .. .
T Consensus 138 ~iV~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~----~~--~- 206 (334)
T PRK07109 138 AIIQVGSALAYRSI----PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSR----LP--V- 206 (334)
T ss_pred EEEEeCChhhccCC----CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhh----cc--c-
Confidence 8887 665443221 1234677799987765432 369999999998876543221000 00 0
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP 166 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g 166 (258)
......++.+.+|+|++++.++.++ ++.+++++
T Consensus 207 ----~~~~~~~~~~pe~vA~~i~~~~~~~---~~~~~vg~ 239 (334)
T PRK07109 207 ----EPQPVPPIYQPEVVADAILYAAEHP---RRELWVGG 239 (334)
T ss_pred ----cccCCCCCCCHHHHHHHHHHHHhCC---CcEEEeCc
Confidence 0011124568999999999999875 44566653
No 141
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.29 E-value=1.6e-05 Score=64.32 Aligned_cols=149 Identities=18% Similarity=0.174 Sum_probs=94.1
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v 55 (258)
.+..+.+|+.|.+++.++++ +.|+|||+++... +.+..++++++. +.+ .
T Consensus 62 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 140 (255)
T PRK06841 62 NAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-G 140 (255)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-C
Confidence 45688999999998877765 5799999997521 234455556554 345 6
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+.+..... +....|..+|+..+.+.+. .++.++.|+||++...+...... . .....
T Consensus 141 ~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~---~~~~~-- 210 (255)
T PRK06841 141 GKIVNLASQAGVVAL----ERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWA-G---EKGER-- 210 (255)
T ss_pred ceEEEEcchhhccCC----CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccc-h---hHHHH--
Confidence 78887 665433221 2244677799998766653 47999999999887765322100 0 00000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.........+.+.+|+|++++.++.++. -.|+.+.+.|
T Consensus 211 -~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dg 250 (255)
T PRK06841 211 -AKKLIPAGRFAYPEEIAAAALFLASDAAAMITGENLVIDG 250 (255)
T ss_pred -HHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECC
Confidence 0000111236799999999999998753 2467777764
No 142
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=98.28 E-value=1.1e-05 Score=65.39 Aligned_cols=150 Identities=16% Similarity=0.148 Sum_probs=93.1
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------h----hchHHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------V----EDQFKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~----~~~~~li~aa~~~g~v 55 (258)
++.++.+|++|.+++.++++ ..|+|||+++... + ...+.+++++++.+ .
T Consensus 61 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~ 139 (256)
T PRK06124 61 AAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-Y 139 (256)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence 37889999999998887775 4589999988521 1 22334445555566 7
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+....... +....|..+|..++.+++. .++.++.|+||.+............ ....
T Consensus 140 ~~iv~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~----~~~~-- 209 (256)
T PRK06124 140 GRIIAITSIAGQVAR----AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADP----AVGP-- 209 (256)
T ss_pred cEEEEEeechhccCC----CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccCh----HHHH--
Confidence 78887 665432221 1235677799998877653 4799999999999876532211000 0000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCCC--CCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRT--LNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~--~~~~~~l~g 166 (258)
..........+++.+|++.++..++.++.. .|+.+.+.|
T Consensus 210 ~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dg 250 (256)
T PRK06124 210 WLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAVDG 250 (256)
T ss_pred HHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCCCEEEECC
Confidence 000000011378899999999999987632 366666654
No 143
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.28 E-value=4.4e-06 Score=68.59 Aligned_cols=102 Identities=15% Similarity=0.063 Sum_probs=73.6
Q ss_pred cCceeEEeccCCCHHHHHHhhC--------CCcEEEEccCccc-----------------------hhchHHHHHHHHHh
Q 025054 4 MINCLIAQGDLHDHESLVKAIK--------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEV 52 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~--------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~ 52 (258)
..+++++.+|++|.+++.++++ +.|+|||+++... +...+.++.++++.
T Consensus 46 ~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~ 125 (277)
T PRK05993 46 AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ 125 (277)
T ss_pred HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc
Confidence 3467889999999988877664 4699999986421 12256788888888
Q ss_pred CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCc
Q 025054 53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFL 110 (258)
Q Consensus 53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~ 110 (258)
+ ..++|. |+...... .++...|..+|+.++.+.+. .|+.+++|+||.+...+.
T Consensus 126 ~-~g~iv~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~ 186 (277)
T PRK05993 126 G-QGRIVQCSSILGLVP----MKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFR 186 (277)
T ss_pred C-CCEEEEECChhhcCC----CCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchh
Confidence 8 789998 66533221 12345677799999987643 689999999998876553
No 144
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.27 E-value=1.6e-05 Score=64.50 Aligned_cols=152 Identities=15% Similarity=0.160 Sum_probs=93.5
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHh-----CC
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEV-----GN 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~-----g~ 54 (258)
.+.++.+|++|++++.++++ +.|+|||+++... +....++++++... +
T Consensus 62 ~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~- 140 (259)
T PRK08213 62 DALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG- 140 (259)
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-
Confidence 36689999999998866654 5799999987421 34556777776544 5
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
..+||. |+............+..+|..+|+.++.+++. .++.++.++||++...+...... . .. +.
T Consensus 141 ~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-~---~~-~~- 214 (259)
T PRK08213 141 YGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLE-R---LG-ED- 214 (259)
T ss_pred CeEEEEECChhhccCCCccccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhH-H---HH-HH-
Confidence 678887 66433222111112335677799999887764 47899999999886544221100 0 00 00
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
+.. .....-+...+|+++.+..++.... ..|+.+.+.|
T Consensus 215 -~~~-~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~ 254 (259)
T PRK08213 215 -LLA-HTPLGRLGDDEDLKGAALLLASDASKHITGQILAVDG 254 (259)
T ss_pred -HHh-cCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence 000 0001124468999999988887642 2467777764
No 145
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.26 E-value=1.6e-05 Score=63.79 Aligned_cols=150 Identities=14% Similarity=0.109 Sum_probs=92.0
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC-CccEE
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG-NIKRF 58 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g-~vk~~ 58 (258)
.+.++.+|++|.+++.++++ +.|+|||+++... +....++++++...- .-.++
T Consensus 56 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~i 135 (245)
T PRK12937 56 RAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRI 135 (245)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEE
Confidence 36788999999999888876 6899999997421 234455666665431 12477
Q ss_pred Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054 59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG 130 (258)
Q Consensus 59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 130 (258)
|. |+.+.... .++...|..+|..++.+++. .++.++.++||++...+....... .......
T Consensus 136 v~~ss~~~~~~----~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~-------~~~~~~~ 204 (245)
T PRK12937 136 INLSTSVIALP----LPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSA-------EQIDQLA 204 (245)
T ss_pred EEEeeccccCC----CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCH-------HHHHHHH
Confidence 77 65543322 12345677799999887754 478999999998766542110000 0000000
Q ss_pred CCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 131 DGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 131 ~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.......+.+.+|+++++..+++++. ..|..+++.|
T Consensus 205 ~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~ 242 (245)
T PRK12937 205 GLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNG 242 (245)
T ss_pred hcCCCCCCCCHHHHHHHHHHHcCccccCccccEEEeCC
Confidence 00011124578999999999987653 2366677653
No 146
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.24 E-value=2.4e-05 Score=62.76 Aligned_cols=148 Identities=13% Similarity=0.140 Sum_probs=89.4
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v 55 (258)
+++++.+|++|.+++.++++ +.|+|||+++... +....++++++ ++.+ .
T Consensus 53 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 131 (245)
T PRK12936 53 RVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-Y 131 (245)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-C
Confidence 47788999999998877653 5899999997421 22333444544 3345 6
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
+++|+ |+....... +....|..+|..++.+.+. .++.++.++||++...+...... .... .
T Consensus 132 ~~iv~~sS~~~~~~~----~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~------~~~~-~ 200 (245)
T PRK12936 132 GRIINITSVVGVTGN----PGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLND------KQKE-A 200 (245)
T ss_pred CEEEEECCHHhCcCC----CCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccCh------HHHH-H
Confidence 78887 665433221 1234576788877655532 57999999999876544322100 0000 0
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCCC--CCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRT--LNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~--~~~~~~l~g 166 (258)
+.+. .....+.+.+|+++++..++..+.. .|+.+++.|
T Consensus 201 ~~~~-~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~ 240 (245)
T PRK12936 201 IMGA-IPMKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNG 240 (245)
T ss_pred HhcC-CCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECC
Confidence 0000 0111256789999999988876432 467788764
No 147
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=98.24 E-value=1.4e-05 Score=63.88 Aligned_cols=148 Identities=18% Similarity=0.220 Sum_probs=91.4
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hh----chHHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VE----DQFKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~----~~~~li~aa~~~g~v 55 (258)
.+.++.+|+.|++++.++++ ++|+|||+++... +. ..+.++.++++.+ +
T Consensus 51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~ 129 (242)
T TIGR01829 51 DFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-W 129 (242)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence 47789999999988877654 5799999997421 11 2344556666667 7
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
+++|. |+....... .....|..+|...+.+++. .++.++.++||++.+........ ... ..
T Consensus 130 ~~iv~iss~~~~~~~----~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~-~~~----~~-- 198 (242)
T TIGR01829 130 GRIINISSVNGQKGQ----FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMRE-DVL----NS-- 198 (242)
T ss_pred cEEEEEcchhhcCCC----CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccch-HHH----HH--
Confidence 88887 665432221 1234566689877655543 58999999999998765432110 000 00
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
+.. ......+...+|+++++..++.++. ..|+.+.+.|
T Consensus 199 ~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~g 238 (242)
T TIGR01829 199 IVA-QIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSING 238 (242)
T ss_pred HHh-cCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEecC
Confidence 000 0001124567899999988887652 3477788775
No 148
>PRK07904 short chain dehydrogenase; Provisional
Probab=98.24 E-value=2.4e-05 Score=63.30 Aligned_cols=126 Identities=18% Similarity=0.115 Sum_probs=84.6
Q ss_pred ceeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054 6 NCLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK 56 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk 56 (258)
+++++.+|+.|.+++.++++ +.|++|+.++... +...+.++.++++.+ ..
T Consensus 61 ~v~~~~~D~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~ 139 (253)
T PRK07904 61 SVEVIDFDALDTDSHPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FG 139 (253)
T ss_pred ceEEEEecCCChHHHHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-Cc
Confidence 57889999999887554443 6899998876531 122345777888877 78
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHH-------HhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAI-------EAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l-------~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
++|. |+....... ++...|..+|+.+..+. +..++.+++++||++...+.... . .
T Consensus 140 ~iv~isS~~g~~~~----~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~--------~--~--- 202 (253)
T PRK07904 140 QIIAMSSVAGERVR----RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA--------K--E--- 202 (253)
T ss_pred eEEEEechhhcCCC----CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC--------C--C---
Confidence 9988 665432211 12345777998876443 34689999999999877543210 0 0
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
. ...++.+|+|+.+..++.++
T Consensus 203 --~----~~~~~~~~~A~~i~~~~~~~ 223 (253)
T PRK07904 203 --A----PLTVDKEDVAKLAVTAVAKG 223 (253)
T ss_pred --C----CCCCCHHHHHHHHHHHHHcC
Confidence 0 12468999999999999765
No 149
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.24 E-value=2.3e-05 Score=61.65 Aligned_cols=140 Identities=18% Similarity=0.147 Sum_probs=93.2
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK 56 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk 56 (258)
+..+..|++|.+++.++++ .+|++||.+|... +...+.++-...+.+ --
T Consensus 55 ~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G 133 (246)
T COG4221 55 ALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SG 133 (246)
T ss_pred eEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-Cc
Confidence 6788999999988555443 6899999998532 334455666666666 55
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH---h----CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE---A----EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---~----~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
++|- ||...... ++...-|..+|+.+..... + .++++|.|.||.+-+..++.....+ + ..+.-..
T Consensus 134 ~IiN~~SiAG~~~----y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g--~-~~~~~~~ 206 (246)
T COG4221 134 HIINLGSIAGRYP----YPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEG--D-DERADKV 206 (246)
T ss_pred eEEEecccccccc----CCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCc--h-hhhHHHH
Confidence 8887 77655432 2335667789999876543 2 5899999999999776555433221 0 0011111
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCCCCC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTL 158 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~ 158 (258)
+ .....+..+|+|+.++.+++.|.+.
T Consensus 207 y----~~~~~l~p~dIA~~V~~~~~~P~~v 232 (246)
T COG4221 207 Y----KGGTALTPEDIAEAVLFAATQPQHV 232 (246)
T ss_pred h----ccCCCCCHHHHHHHHHHHHhCCCcc
Confidence 1 1135789999999999999999643
No 150
>PRK06196 oxidoreductase; Provisional
Probab=98.24 E-value=1.5e-05 Score=66.71 Aligned_cols=145 Identities=13% Similarity=0.044 Sum_probs=88.4
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hhchHHHHHHHHHhCCccE
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VEDQFKLIAAIKEVGNIKR 57 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~~g~vk~ 57 (258)
++.++.+|++|.+++.++++ ++|+|||+++... ....+.++.++++.+ ..+
T Consensus 72 ~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~ 150 (315)
T PRK06196 72 GVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GAR 150 (315)
T ss_pred hCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCe
Confidence 37889999999998877663 6899999997421 122456666677766 678
Q ss_pred EEc-CCCCCCCCC--------CCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCC
Q 025054 58 FFP-TEYGSNVDA--------GHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAP 121 (258)
Q Consensus 58 ~v~-S~~~~~~~~--------~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~ 121 (258)
+|. |+.+..... ..+.++...|..+|...+.+.+. .|+.+++++||++.+++...+.... .
T Consensus 151 iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~ 227 (315)
T PRK06196 151 VVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREE---Q 227 (315)
T ss_pred EEEECCHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhh---h
Confidence 887 664332110 01112234567799988766532 5899999999999887643221100 0
Q ss_pred CCCceEeccCCCcee--eeeccchHHHHHHHHhcCCC
Q 025054 122 PRENILFYGDGQPKA--IFNKEEDIATYTIKAVDDPR 156 (258)
Q Consensus 122 ~~~~~~~~g~g~~~~--~~v~~~D~a~~~~~~l~~~~ 156 (258)
. ............ .+.+.+|+|..++.++..+.
T Consensus 228 ~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 262 (315)
T PRK06196 228 V--ALGWVDEHGNPIDPGFKTPAQGAATQVWAATSPQ 262 (315)
T ss_pred h--hhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCCc
Confidence 0 000000000111 24678999999999987653
No 151
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.23 E-value=1.3e-05 Score=64.90 Aligned_cols=153 Identities=13% Similarity=0.034 Sum_probs=91.7
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC---Ccc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG---NIK 56 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g---~vk 56 (258)
.+.++.+|++|.+++.++++ ++|+|||+++... +.+...+++++.... .-.
T Consensus 60 ~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 139 (258)
T PRK09134 60 RAVALQADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARG 139 (258)
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc
Confidence 47789999999998888775 4799999997421 334456666554421 024
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY 129 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (258)
++|. ++...... .+....|..+|..++.+.+. .++.++.++||.++.........+ . ......
T Consensus 140 ~iv~~~s~~~~~~----~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~-----~-~~~~~~ 209 (258)
T PRK09134 140 LVVNMIDQRVWNL----NPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDF-----A-RQHAAT 209 (258)
T ss_pred eEEEECchhhcCC----CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHH-----H-HHHhcC
Confidence 5665 43211111 11234677799988876654 248999999998765321110000 0 000000
Q ss_pred cCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCH
Q 025054 130 GDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSF 173 (258)
Q Consensus 130 g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~ 173 (258)
..+ ...+++|+|+++..+++.+...|+.+.+.| +..+++
T Consensus 210 ~~~----~~~~~~d~a~~~~~~~~~~~~~g~~~~i~g-g~~~~~ 248 (258)
T PRK09134 210 PLG----RGSTPEEIAAAVRYLLDAPSVTGQMIAVDG-GQHLAW 248 (258)
T ss_pred CCC----CCcCHHHHHHHHHHHhcCCCcCCCEEEECC-Ceeccc
Confidence 001 246799999999999987655677888876 444544
No 152
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.23 E-value=3.4e-05 Score=62.56 Aligned_cols=153 Identities=12% Similarity=0.035 Sum_probs=91.9
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc----c--------------------hhchHHHHHHHHHhCCc
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT----E--------------------VEDQFKLIAAIKEVGNI 55 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~----~--------------------~~~~~~li~aa~~~g~v 55 (258)
+.++.+|++|.+++.++++ +.|++||+++.. . +...+.++..+++.+ .
T Consensus 58 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~ 136 (260)
T PRK12823 58 ALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-G 136 (260)
T ss_pred EEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence 5678899999887776665 579999999631 0 122345666666666 6
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCC-CCce
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPP-RENI 126 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~-~~~~ 126 (258)
.++|. |+..... .+..+|..+|+.++.+.+. .++.++.|+||++++............... ....
T Consensus 137 g~iv~~sS~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~ 210 (260)
T PRK12823 137 GAIVNVSSIATRG------INRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWY 210 (260)
T ss_pred CeEEEEcCccccC------CCCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccH
Confidence 78887 6643321 1235688899999877654 489999999999987532110000000000 0000
Q ss_pred E-e---ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 127 L-F---YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 127 ~-~---~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
. + .-......-+.+++|+|+++..++.+.. -.|+.+++.|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~g 256 (260)
T PRK12823 211 QQIVDQTLDSSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGG 256 (260)
T ss_pred HHHHHHHhccCCcccCCCHHHHHHHHHHHcCcccccccCcEEeecC
Confidence 0 0 0000011124578999999999987652 2467788764
No 153
>PRK07890 short chain dehydrogenase; Provisional
Probab=98.20 E-value=1.2e-05 Score=65.14 Aligned_cols=157 Identities=13% Similarity=0.085 Sum_probs=92.1
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHHhC--Ccc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKEVG--NIK 56 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~g--~vk 56 (258)
.+..+.+|++|.+++.++++ +.|+|||+++... +.....+++++...- +..
T Consensus 55 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 134 (258)
T PRK07890 55 RALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGG 134 (258)
T ss_pred ceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC
Confidence 36789999999998877664 5799999997421 223345666665321 124
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCC-CCCCCC-CCCCCc-
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTM-AQPGAT-APPREN- 125 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~-~~~~~~-~~~~~~- 125 (258)
++|. |+...... .++...|..+|..++.+++. .++.++.++||.+++...... ...... ......
T Consensus 135 ~ii~~sS~~~~~~----~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~ 210 (258)
T PRK07890 135 SIVMINSMVLRHS----QPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQI 210 (258)
T ss_pred EEEEEechhhccC----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHH
Confidence 7887 66543221 12345677799998877764 479999999999988654321 100000 000000
Q ss_pred eEeccCCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcC
Q 025054 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRP 166 (258)
Q Consensus 126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g 166 (258)
....-.......+++++|+++++..++... .-.|+.+.+.|
T Consensus 211 ~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~g 253 (258)
T PRK07890 211 YAETAANSDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNC 253 (258)
T ss_pred HHHHhhcCCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCC
Confidence 000000111123678899999999988753 22455665654
No 154
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=98.19 E-value=9.9e-06 Score=65.05 Aligned_cols=150 Identities=15% Similarity=0.114 Sum_probs=87.4
Q ss_pred ceeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc--------------------hhchHHHHHHHHHh------
Q 025054 6 NCLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE--------------------VEDQFKLIAAIKEV------ 52 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~------ 52 (258)
.+.++.+|+.|++++.++++. .|+|||+++... +.....+++++...
T Consensus 52 ~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 131 (247)
T PRK09730 52 KAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHG 131 (247)
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 367899999999998887763 589999998521 11222333333221
Q ss_pred CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054 53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE 124 (258)
Q Consensus 53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~ 124 (258)
++-.+||. |+......... ...+|..+|+.++.+++. .+++++.+|||++++++.........
T Consensus 132 ~~~g~~v~~sS~~~~~~~~~---~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~------ 202 (247)
T PRK09730 132 GSGGAIVNVSSAASRLGAPG---EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGR------ 202 (247)
T ss_pred CCCcEEEEECchhhccCCCC---cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHH------
Confidence 11245777 66543322110 123577799998876643 48999999999999875322110000
Q ss_pred ceEeccCCCcee-eeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 125 NILFYGDGQPKA-IFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 125 ~~~~~g~g~~~~-~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
...... ..+. ...+.+|+|+++..++.++. ..|..+.+.|
T Consensus 203 ~~~~~~--~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g 245 (247)
T PRK09730 203 VDRVKS--NIPMQRGGQPEEVAQAIVWLLSDKASYVTGSFIDLAG 245 (247)
T ss_pred HHHHHh--cCCCCCCcCHHHHHHHHHhhcChhhcCccCcEEecCC
Confidence 000000 0001 12378999999999887642 2455666653
No 155
>PRK07069 short chain dehydrogenase; Validated
Probab=98.18 E-value=2.3e-05 Score=63.10 Aligned_cols=150 Identities=11% Similarity=0.080 Sum_probs=91.6
Q ss_pred eEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCccE
Q 025054 8 LIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIKR 57 (258)
Q Consensus 8 ~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk~ 57 (258)
..+.+|+.|.+++.++++ ++|+|||+++... +...++++.++++.+ .++
T Consensus 54 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ 132 (251)
T PRK07069 54 FAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PAS 132 (251)
T ss_pred EEEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcE
Confidence 457889999998877664 5799999997531 125567778888777 789
Q ss_pred EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------C--CCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------E--GIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~--~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
+|. |+....... +....|..+|...+.+.+. . ++.++.++||++.+.+...... . .... ....
T Consensus 133 ii~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~-~~~~-~~~~ 205 (251)
T PRK07069 133 IVNISSVAAFKAE----PDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQ-R-LGEE-EATR 205 (251)
T ss_pred EEEecChhhccCC----CCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhh-h-ccch-hHHH
Confidence 998 665432221 1234566799988876653 2 4788999999888765432110 0 0000 0000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEc
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLR 165 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~ 165 (258)
....+.....+.+.+|+++++..++..+. ..|..+.+.
T Consensus 206 ~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~ 245 (251)
T PRK07069 206 KLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGAELVID 245 (251)
T ss_pred HHhccCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEEC
Confidence 01011111235688999999999887652 235555554
No 156
>PRK07024 short chain dehydrogenase; Provisional
Probab=98.16 E-value=5e-05 Score=61.52 Aligned_cols=127 Identities=15% Similarity=0.103 Sum_probs=84.0
Q ss_pred ceeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc--------------------hhch----HHHHHHHHHhCC
Q 025054 6 NCLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE--------------------VEDQ----FKLIAAIKEVGN 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~--------------------~~~~----~~li~aa~~~g~ 54 (258)
.+.++.+|++|++++.++++. .|++||+++... +.+. +.++.++++.+
T Consensus 51 ~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~- 129 (257)
T PRK07024 51 RVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR- 129 (257)
T ss_pred eeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-
Confidence 578899999999998887653 699999987421 1222 33455666676
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
..++|. |+....... +....|..+|+.++.+.+. .+++++.++||.+.+...... ..
T Consensus 130 ~~~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-----------~~ 194 (257)
T PRK07024 130 RGTLVGIASVAGVRGL----PGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN-----------PY 194 (257)
T ss_pred CCEEEEEechhhcCCC----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-----------CC
Confidence 678886 554332211 1234577799999877633 589999999999876542210 00
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
.. + .+++.+|+++.+..++.+.
T Consensus 195 ---~~---~-~~~~~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 195 ---PM---P-FLMDADRFAARAARAIARG 216 (257)
T ss_pred ---CC---C-CccCHHHHHHHHHHHHhCC
Confidence 00 0 1367999999999998754
No 157
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=98.16 E-value=4.1e-05 Score=62.35 Aligned_cols=154 Identities=14% Similarity=0.152 Sum_probs=93.2
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v 55 (258)
.+.++.+|++|.+++.++++ +.|+|||+++... +...+.++..+++.+ .
T Consensus 60 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 138 (265)
T PRK07097 60 EAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-H 138 (265)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-C
Confidence 36788999999998888775 4799999998521 112234455555556 6
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce-
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI- 126 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~- 126 (258)
.++|. |+....... ++...|..+|+.++.+.+. .++.++.|+||.+.............. .....+
T Consensus 139 g~iv~isS~~~~~~~----~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~ 213 (265)
T PRK07097 139 GKIINICSMMSELGR----ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQAD-GSRHPFD 213 (265)
T ss_pred cEEEEEcCccccCCC----CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhcccc-ccchhHH
Confidence 78887 654332221 2345677799998877654 489999999999987654321110000 000000
Q ss_pred -EeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 127 -LFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 127 -~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
.+... .....+...+|+|..+..++.++ . ..|+.+.+.|
T Consensus 214 ~~~~~~-~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g 255 (265)
T PRK07097 214 QFIIAK-TPAARWGDPEDLAGPAVFLASDASNFVNGHILYVDG 255 (265)
T ss_pred HHHHhc-CCccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECC
Confidence 00000 00113567899999999999874 2 2466666654
No 158
>PRK08264 short chain dehydrogenase; Validated
Probab=98.16 E-value=6.7e-05 Score=59.94 Aligned_cols=125 Identities=18% Similarity=0.054 Sum_probs=83.6
Q ss_pred CceeEEeccCCCHHHHHHhhC---CCcEEEEccCc-cc-------------------hhchHHHHHHH----HHhCCccE
Q 025054 5 INCLIAQGDLHDHESLVKAIK---PVDVVISAVGR-TE-------------------VEDQFKLIAAI----KEVGNIKR 57 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~-~~-------------------~~~~~~li~aa----~~~g~vk~ 57 (258)
.++.++.+|+.|.+++.++++ .+|+|||+++. .. +....++++++ ++.+ ..+
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ 127 (238)
T PRK08264 49 PRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGA 127 (238)
T ss_pred CceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCE
Confidence 357889999999999888876 47999999986 21 23344555554 3455 678
Q ss_pred EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054 58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY 129 (258)
Q Consensus 58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (258)
+|. |+...... .++...|..+|..++.+.+. .+++++++|||.+.......
T Consensus 128 ~v~~sS~~~~~~----~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~----------------- 186 (238)
T PRK08264 128 IVNVLSVLSWVN----FPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG----------------- 186 (238)
T ss_pred EEEEcChhhccC----CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc-----------------
Confidence 887 65443221 12345677799999866653 48999999998765432110
Q ss_pred cCCCceeeeeccchHHHHHHHHhcCC
Q 025054 130 GDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 130 g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
.. ...++.+|+++.+...+...
T Consensus 187 ~~----~~~~~~~~~a~~~~~~~~~~ 208 (238)
T PRK08264 187 LD----APKASPADVARQILDALEAG 208 (238)
T ss_pred CC----cCCCCHHHHHHHHHHHHhCC
Confidence 00 12577889999999888754
No 159
>PRK12743 oxidoreductase; Provisional
Probab=98.16 E-value=3.3e-05 Score=62.54 Aligned_cols=149 Identities=17% Similarity=0.085 Sum_probs=91.3
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v 55 (258)
.+.++.+|++|.+++.++++ ..|+|||+++... +.....+++++.. .++-
T Consensus 53 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~ 132 (256)
T PRK12743 53 RAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQG 132 (256)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence 37788999999988777664 5799999987421 2334455555543 2212
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+...... .++...|..+|+.++.+++. .++.++.|+||.+...+...... . .. ...
T Consensus 133 g~ii~isS~~~~~~----~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~-~---~~--~~~ 202 (256)
T PRK12743 133 GRIINITSVHEHTP----LPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDS-D---VK--PDS 202 (256)
T ss_pred eEEEEEeeccccCC----CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccCh-H---HH--HHH
Confidence 47887 66543322 12345677799998877653 47999999999988765322100 0 00 000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
..+.. ...+.+.+|++.++..++.... ..|..+.+.|
T Consensus 203 ~~~~~--~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg 241 (256)
T PRK12743 203 RPGIP--LGRPGDTHEIASLVAWLCSEGASYTTGQSLIVDG 241 (256)
T ss_pred HhcCC--CCCCCCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence 00000 0124588999999999887653 2467777765
No 160
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.15 E-value=2.8e-05 Score=63.04 Aligned_cols=150 Identities=13% Similarity=0.081 Sum_probs=92.5
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v 55 (258)
.+.++.+|+.|.+++.++++ +.|++||+++... +...+.++..+++.+ .
T Consensus 64 ~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~ 142 (258)
T PRK06935 64 KVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-S 142 (258)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-C
Confidence 47789999999998888776 6799999987421 122344445555566 6
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|+ |+....... +....|..+|+.++.+.+. .|+.++.|+||++........... ......
T Consensus 143 g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-----~~~~~~ 213 (258)
T PRK06935 143 GKIINIASMLSFQGG----KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD-----KNRNDE 213 (258)
T ss_pred eEEEEECCHHhccCC----CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC-----hHHHHH
Confidence 78887 665432211 1234677799999877654 479999999998876543221100 000000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
+... .....+...+|+|..+..++.+.. -.|.++.+-|
T Consensus 214 ~~~~-~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 253 (258)
T PRK06935 214 ILKR-IPAGRWGEPDDLMGAAVFLASRASDYVNGHILAVDG 253 (258)
T ss_pred HHhc-CCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECC
Confidence 0000 001236788999999999887642 2466777654
No 161
>PRK07814 short chain dehydrogenase; Provisional
Probab=98.15 E-value=4.9e-05 Score=61.85 Aligned_cols=150 Identities=17% Similarity=0.096 Sum_probs=92.9
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH-----hCC
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE-----VGN 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~-----~g~ 54 (258)
++.++.+|++|++++.++++ ++|+|||+++... +....++++++.. .+
T Consensus 60 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~- 138 (263)
T PRK07814 60 RAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG- 138 (263)
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-
Confidence 47788999999999887765 6799999987421 3445566666653 34
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
..++|. |+...... .++..+|..+|+.++.+.+. .++.++.|+||.+........... ..-.-.
T Consensus 139 ~g~iv~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~-----~~~~~~ 209 (263)
T PRK07814 139 GGSVINISSTMGRLA----GRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAAN-----DELRAP 209 (263)
T ss_pred CeEEEEEccccccCC----CCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCC-----HHHHHH
Confidence 567887 65443221 12345678899999887764 357889999998765543221100 000000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
+.+. .....+.+.+|+|++++.++.+. . ..++.+.+.|
T Consensus 210 ~~~~-~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~ 249 (263)
T PRK07814 210 MEKA-TPLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDG 249 (263)
T ss_pred HHhc-CCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECC
Confidence 1111 01122468899999999998764 2 3466666653
No 162
>PLN02253 xanthoxin dehydrogenase
Probab=98.14 E-value=3.8e-05 Score=63.03 Aligned_cols=154 Identities=14% Similarity=0.137 Sum_probs=91.6
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hhchHHHHHHHHH----hC
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VEDQFKLIAAIKE----VG 53 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~----~g 53 (258)
++.++.+|++|.+++.++++ ++|+|||+++... +.+..++++++.. .+
T Consensus 67 ~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 146 (280)
T PLN02253 67 NVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK 146 (280)
T ss_pred ceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC
Confidence 47889999999999988776 6899999987421 2233455555543 22
Q ss_pred CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054 54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN 125 (258)
Q Consensus 54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~ 125 (258)
-.++|. |+....... +....|..+|+.++.+.+. .++.+..++||.+............ . .....
T Consensus 147 -~g~ii~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~-~~~~~ 219 (280)
T PLN02253 147 -KGSIVSLCSVASAIGG----LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPED-E-RTEDA 219 (280)
T ss_pred -CceEEEecChhhcccC----CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccc-c-chhhh
Confidence 235665 554332211 1234677899999887754 4799999999988765422110000 0 00000
Q ss_pred e----EeccCCC-ceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 126 I----LFYGDGQ-PKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 126 ~----~~~g~g~-~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
+ ....... .....++.+|+|.++..++.+.. -.|..+.+.|
T Consensus 220 ~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdg 267 (280)
T PLN02253 220 LAGFRAFAGKNANLKGVELTVDDVANAVLFLASDEARYISGLNLMIDG 267 (280)
T ss_pred hhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCcccccccCcEEEECC
Confidence 0 0001000 01124789999999999987652 2467778875
No 163
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.14 E-value=3.1e-05 Score=62.67 Aligned_cols=153 Identities=14% Similarity=0.095 Sum_probs=91.6
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v 55 (258)
++.++.+|++|++++.++++ +.|+|||+++... +.+ .+.++...++.+ .
T Consensus 52 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~ 130 (255)
T PRK06463 52 GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-N 130 (255)
T ss_pred CCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-C
Confidence 57889999999998888765 5799999997521 122 355555555555 5
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce-
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI- 126 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~- 126 (258)
.++|. |+....... .+....|..+|+.++.+.+. .++.++.|+||++-..+....... ......
T Consensus 131 g~iv~isS~~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~----~~~~~~~ 203 (255)
T PRK06463 131 GAIVNIASNAGIGTA---AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQ----EEAEKLR 203 (255)
T ss_pred cEEEEEcCHHhCCCC---CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCc----cchHHHH
Confidence 68887 554322111 11234566799998877654 479999999998765443211000 000000
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
...........+.+.+|+|+++..++.++. -.|..+.+.|
T Consensus 204 ~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dg 245 (255)
T PRK06463 204 ELFRNKTVLKTTGKPEDIANIVLFLASDDARYITGQVIVADG 245 (255)
T ss_pred HHHHhCCCcCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECC
Confidence 000011111225689999999999987653 2466777754
No 164
>PRK06701 short chain dehydrogenase; Provisional
Probab=98.14 E-value=4.8e-05 Score=62.90 Aligned_cols=149 Identities=15% Similarity=0.182 Sum_probs=93.0
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHHh--CCcc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKEV--GNIK 56 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~--g~vk 56 (258)
.+.++.+|+.|.+++.++++ ++|+|||+++... +....++++++... . -.
T Consensus 97 ~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~-~g 175 (290)
T PRK06701 97 KCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ-GS 175 (290)
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh-CC
Confidence 36688999999998887765 5799999987421 23455666666542 2 24
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
++|. |+....... +....|..+|..++.+.+. .+++++.|+||.+...+...... ...+..
T Consensus 176 ~iV~isS~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~-------~~~~~~ 244 (290)
T PRK06701 176 AIINTGSITGYEGN----ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD-------EEKVSQ 244 (290)
T ss_pred eEEEEecccccCCC----CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC-------HHHHHH
Confidence 7777 654432221 1234566799998876653 48999999999887764332100 000000
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.+.......+.+.+|+|+++..++.+.. ..|..+.+.|
T Consensus 245 ~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idg 284 (290)
T PRK06701 245 FGSNTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNG 284 (290)
T ss_pred HHhcCCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence 1111112336789999999999998752 2466777764
No 165
>PRK08251 short chain dehydrogenase; Provisional
Probab=98.13 E-value=6.9e-05 Score=60.27 Aligned_cols=127 Identities=14% Similarity=0.105 Sum_probs=82.2
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHH----HHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIA----AIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~----aa~~~g~v 55 (258)
.+.++.+|++|.+++.++++ +.|+|||+++... +....++++ ..++.+ .
T Consensus 54 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~ 132 (248)
T PRK08251 54 KVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-S 132 (248)
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence 47788999999988876654 6899999997421 122233333 344556 7
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
+++|. |+........ .+...|..+|+.++.+.+. .++.++.++||++........ .
T Consensus 133 ~~iv~~sS~~~~~~~~---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~--------~----- 196 (248)
T PRK08251 133 GHLVLISSVSAVRGLP---GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA--------K----- 196 (248)
T ss_pred CeEEEEeccccccCCC---CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc--------c-----
Confidence 78887 6654332211 1134577799988766643 478999999998765432210 0
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
. ....++.+|.++.+.++++..
T Consensus 197 -----~-~~~~~~~~~~a~~i~~~~~~~ 218 (248)
T PRK08251 197 -----S-TPFMVDTETGVKALVKAIEKE 218 (248)
T ss_pred -----c-CCccCCHHHHHHHHHHHHhcC
Confidence 0 112567899999999998754
No 166
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=98.12 E-value=4.7e-05 Score=61.51 Aligned_cols=150 Identities=11% Similarity=0.129 Sum_probs=91.0
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~v 55 (258)
.+..+.+|++|.+++.++++ +.|+|||+++... +.....++++ +++.+ .
T Consensus 59 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 137 (254)
T PRK08085 59 KAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-A 137 (254)
T ss_pred eEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C
Confidence 35678899999998887664 4799999997421 1222333443 33445 5
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+....... +....|..+|+.++.+.+. .|+.++.|+||++........... .. ...
T Consensus 138 ~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~-----~~-~~~ 207 (254)
T PRK08085 138 GKIINICSMQSELGR----DTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED-----EA-FTA 207 (254)
T ss_pred cEEEEEccchhccCC----CCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC-----HH-HHH
Confidence 78887 665432221 2345677799998877764 489999999998887654321110 00 000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCC-CC-CCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDP-RT-LNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~-~~~~~~l~g 166 (258)
..........+...+|+|.++..++.+. .. .|..+.+-|
T Consensus 208 ~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dg 248 (254)
T PRK08085 208 WLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDG 248 (254)
T ss_pred HHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence 0000011123678999999999998864 22 356666654
No 167
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.11 E-value=9e-05 Score=60.01 Aligned_cols=154 Identities=18% Similarity=0.097 Sum_probs=89.7
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC-CccEE
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG-NIKRF 58 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g-~vk~~ 58 (258)
.++++.+|++|++++.++++ +.|++||+++... +.+...++.++...- .-.++
T Consensus 62 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~i 141 (257)
T PRK12744 62 KAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKI 141 (257)
T ss_pred cEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCE
Confidence 46778999999999887765 5799999998521 223344555554320 01233
Q ss_pred E--cCCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054 59 F--PTEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY 129 (258)
Q Consensus 59 v--~S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (258)
+ .|+...... +....|..+|+.++.+.+. .+++++.++||.+...+.............. . ...
T Consensus 142 v~~~ss~~~~~~-----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~-~-~~~ 214 (257)
T PRK12744 142 VTLVTSLLGAFT-----PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHK-T-AAA 214 (257)
T ss_pred EEEecchhcccC-----CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhccc-c-ccc
Confidence 3 233322111 1234577799999988764 3799999999999876432211111000000 0 000
Q ss_pred cCCCceeeeeccchHHHHHHHHhcCCCC-CCceEEEcC
Q 025054 130 GDGQPKAIFNKEEDIATYTIKAVDDPRT-LNKTLYLRP 166 (258)
Q Consensus 130 g~g~~~~~~v~~~D~a~~~~~~l~~~~~-~~~~~~l~g 166 (258)
........+.+.+|+|+++..+++.... .|+.+++.|
T Consensus 215 ~~~~~~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~g 252 (257)
T PRK12744 215 LSPFSKTGLTDIEDIVPFIRFLVTDGWWITGQTILING 252 (257)
T ss_pred ccccccCCCCCHHHHHHHHHHhhcccceeecceEeecC
Confidence 1111112477899999999999985322 367777764
No 168
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=98.10 E-value=5.4e-05 Score=60.88 Aligned_cols=151 Identities=16% Similarity=0.137 Sum_probs=90.4
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v 55 (258)
.+.++.+|++|.+++.++++ +.|++||+++... +.....+++++.. .+..
T Consensus 53 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 132 (248)
T TIGR01832 53 RFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRG 132 (248)
T ss_pred ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC
Confidence 36789999999998876654 5899999987521 2233445555532 2213
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+....... +....|..+|+.++.+.+. .++.++.|+||++.......+... ... ...
T Consensus 133 g~iv~~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~----~~~-~~~ 203 (248)
T TIGR01832 133 GKIINIASMLSFQGG----IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD----EDR-NAA 203 (248)
T ss_pred eEEEEEecHHhccCC----CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC----hHH-HHH
Confidence 47776 554322111 1234577799999877754 479999999998877643221100 000 000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
+... .....+++.+|+|+++..++++.. ..|+.+.+.|
T Consensus 204 ~~~~-~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 243 (248)
T TIGR01832 204 ILER-IPAGRWGTPDDIGGPAVFLASSASDYVNGYTLAVDG 243 (248)
T ss_pred HHhc-CCCCCCcCHHHHHHHHHHHcCccccCcCCcEEEeCC
Confidence 0000 011247899999999999998643 2366666654
No 169
>PRK06398 aldose dehydrogenase; Validated
Probab=98.10 E-value=8.7e-05 Score=60.23 Aligned_cols=156 Identities=15% Similarity=0.114 Sum_probs=92.0
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v 55 (258)
.+..+.+|++|++++.++++ +.|+|||+++... +.+...+++++ ++.+ .
T Consensus 45 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 123 (258)
T PRK06398 45 DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-K 123 (258)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence 46788999999998887765 5899999987421 22333444444 4455 5
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCC-CCCC--CCc
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGA-TAPP--REN 125 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~-~~~~--~~~ 125 (258)
.++|. |+...... .+....|..+|+.++.+.+. .++.++.|+||++...+......... .... ...
T Consensus 124 g~iv~isS~~~~~~----~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~ 199 (258)
T PRK06398 124 GVIINIASVQSFAV----TRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERK 199 (258)
T ss_pred eEEEEeCcchhccC----CCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHH
Confidence 78887 66543321 12345677799999887764 24889999999887654322110000 0000 000
Q ss_pred eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
...++.......+...+|+|+++..++.... ..|+.+.+.|
T Consensus 200 ~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dg 242 (258)
T PRK06398 200 IREWGEMHPMKRVGKPEEVAYVVAFLASDLASFITGECVTVDG 242 (258)
T ss_pred HHhhhhcCCcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECC
Confidence 0001111111135688999999999987642 2466666654
No 170
>PRK08643 acetoin reductase; Validated
Probab=98.09 E-value=7e-05 Score=60.56 Aligned_cols=156 Identities=19% Similarity=0.199 Sum_probs=88.2
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v 55 (258)
++.++.+|++|++++.++++ +.|+|||+++... +.....+++++ ++.+.-
T Consensus 52 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 131 (256)
T PRK08643 52 KAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHG 131 (256)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence 46778999999998877665 5799999997521 12222233333 333212
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCC-CCCCC-CCCC-
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQ-PGATA-PPRE- 124 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~-~~~~~-~~~~- 124 (258)
.++|. |+....... +....|..+|..++.+.+. .|+.++.|+||++...+...... ..... ....
T Consensus 132 ~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~ 207 (256)
T PRK08643 132 GKIINATSQAGVVGN----PELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEW 207 (256)
T ss_pred CEEEEECccccccCC----CCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchH
Confidence 46666 665433221 1234677799988766643 57999999999987755322110 00000 0000
Q ss_pred -ceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 125 -NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 125 -~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
...+...-. ...+.+.+|+|.++..++.+.. -.|..+.+-|
T Consensus 208 ~~~~~~~~~~-~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdg 251 (256)
T PRK08643 208 GMEQFAKDIT-LGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDG 251 (256)
T ss_pred HHHHHhccCC-CCCCcCHHHHHHHHHHHhCccccCccCcEEEeCC
Confidence 000000000 1125688999999999987652 3456666653
No 171
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.06 E-value=5.4e-05 Score=61.11 Aligned_cols=151 Identities=13% Similarity=0.050 Sum_probs=91.4
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v 55 (258)
+++++.+|+.|.+++.++++ +.|+|||+++... +.....+++++.. .+..
T Consensus 48 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 127 (252)
T PRK07856 48 PAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGG 127 (252)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence 57889999999998888775 3599999987421 2334455555533 2114
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
.++|. |+....... +....|..+|+.++.+++. ..+.+..|+||.+......... . .......
T Consensus 128 g~ii~isS~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~--~----~~~~~~~ 197 (252)
T PRK07856 128 GSIVNIGSVSGRRPS----PGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHY--G----DAEGIAA 197 (252)
T ss_pred cEEEEEcccccCCCC----CCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhc--c----CHHHHHH
Confidence 57887 665443221 2345677799999988764 2378889999988765432110 0 0000000
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
.........+...+|+|++++.++.+. . -.|..+.+-|
T Consensus 198 ~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdg 237 (252)
T PRK07856 198 VAATVPLGRLATPADIAWACLFLASDLASYVSGANLEVHG 237 (252)
T ss_pred HhhcCCCCCCcCHHHHHHHHHHHcCcccCCccCCEEEECC
Confidence 000000112467899999999998764 2 3467777765
No 172
>PRK07102 short chain dehydrogenase; Provisional
Probab=98.04 E-value=0.00011 Score=58.96 Aligned_cols=127 Identities=15% Similarity=0.155 Sum_probs=83.3
Q ss_pred ceeEEeccCCCHHHHHHhhC----CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCccEE
Q 025054 6 NCLIAQGDLHDHESLVKAIK----PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIKRF 58 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~----g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk~~ 58 (258)
+++++.+|++|.+++.++++ ..|.|||+++... +.+..++++++ ++.+ ..++
T Consensus 52 ~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~i 130 (243)
T PRK07102 52 AVSTHELDILDTASHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTI 130 (243)
T ss_pred eEEEEecCCCChHHHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEE
Confidence 57889999999988877765 4699999886421 22334444444 3456 6788
Q ss_pred Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054 59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG 130 (258)
Q Consensus 59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 130 (258)
|. |+....... +....|..+|..++.+.+. .++.++.++||.+.+.+.... ..++
T Consensus 131 v~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~-------------~~~~ 193 (243)
T PRK07102 131 VGISSVAGDRGR----ASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL-------------KLPG 193 (243)
T ss_pred EEEecccccCCC----CCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc-------------CCCc
Confidence 87 654332221 1234677799987766543 589999999998877542210 0011
Q ss_pred CCCceeeeeccchHHHHHHHHhcCC
Q 025054 131 DGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 131 ~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
....+.+|+++.+..+++.+
T Consensus 194 -----~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 194 -----PLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred -----cccCCHHHHHHHHHHHHhCC
Confidence 12567899999999988854
No 173
>PRK06114 short chain dehydrogenase; Provisional
Probab=98.03 E-value=8e-05 Score=60.24 Aligned_cols=151 Identities=12% Similarity=0.067 Sum_probs=89.6
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhch----HHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g~v 55 (258)
.+..+.+|+.|++++.++++ ..|++||+++... +... +.++.++++.+ .
T Consensus 59 ~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 137 (254)
T PRK06114 59 RAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-G 137 (254)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-C
Confidence 36778999999998887765 3699999998521 1222 34444555555 5
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+......... .....|..+|+.++.+.+. .|+++.+|+||++...+... +.... ....+.
T Consensus 138 ~~iv~isS~~~~~~~~~--~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~---~~~~~-~~~~~~ 211 (254)
T PRK06114 138 GSIVNIASMSGIIVNRG--LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTR---PEMVH-QTKLFE 211 (254)
T ss_pred cEEEEECchhhcCCCCC--CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccc---ccchH-HHHHHH
Confidence 67886 55433221111 1134566799988776653 58999999999887654321 11000 000000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
-..+. .-+...+|++..++.++.+.. -.|+.+.+.|
T Consensus 212 -~~~p~--~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dg 249 (254)
T PRK06114 212 -EQTPM--QRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDG 249 (254)
T ss_pred -hcCCC--CCCcCHHHHHHHHHHHcCccccCcCCceEEECc
Confidence 00001 125678999999999987642 2466777664
No 174
>PRK07478 short chain dehydrogenase; Provisional
Probab=98.03 E-value=7.8e-05 Score=60.25 Aligned_cols=151 Identities=15% Similarity=0.129 Sum_probs=91.6
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc----c--------------------hhchHHHHHHHHHhCC
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT----E--------------------VEDQFKLIAAIKEVGN 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~----~--------------------~~~~~~li~aa~~~g~ 54 (258)
.+.++.+|+.|++++.++++ +.|++||+++.. . +...+.++..+++.+
T Consensus 56 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~- 134 (254)
T PRK07478 56 EAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG- 134 (254)
T ss_pred cEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence 36778999999998887765 679999999742 1 123344555666666
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
..++|. |+...... +.+....|..+|+..+.+.+. .++.++.|+||++-..+...... . .. ..
T Consensus 135 ~~~iv~~sS~~~~~~---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~-~~--~~ 205 (254)
T PRK07478 135 GGSLIFTSTFVGHTA---GFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGD---T-PE--AL 205 (254)
T ss_pred CceEEEEechHhhcc---CCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccC---C-HH--HH
Confidence 667887 65432211 112345677799998876653 47999999999886653321110 0 00 00
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
...........+...+|+|+.+..++.++. -.|+.+.+.|
T Consensus 206 ~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dg 247 (254)
T PRK07478 206 AFVAGLHALKRMAQPEEIAQAALFLASDAASFVTGTALLVDG 247 (254)
T ss_pred HHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCC
Confidence 000000001125689999999999987653 2466777754
No 175
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.02 E-value=5.5e-05 Score=61.37 Aligned_cols=135 Identities=19% Similarity=0.089 Sum_probs=82.6
Q ss_pred ceeEEeccCCCHHHHHHhhC--------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCC
Q 025054 6 NCLIAQGDLHDHESLVKAIK--------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGN 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~--------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~ 54 (258)
.+.++.+|++|.+++.++++ +.|+|||+++... +.....+++++ ++.+
T Consensus 49 ~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~- 127 (260)
T PRK08267 49 NAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP- 127 (260)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-
Confidence 47889999999988887665 4599999998531 23333454444 4455
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
..++|. |+....... .....|..+|+.++.+.+. .++++++|+||++...+....... .. .
T Consensus 128 ~~~iv~isS~~~~~~~----~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~----~~---~ 196 (260)
T PRK08267 128 GARVINTSSASAIYGQ----PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNE----VD---A 196 (260)
T ss_pred CCEEEEeCchhhCcCC----CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccch----hh---h
Confidence 567776 654332221 1234566799988766543 479999999998876543220000 00 0
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
... ......++.+|+|+++..++..+
T Consensus 197 ~~~---~~~~~~~~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 197 GST---KRLGVRLTPEDVAEAVWAAVQHP 222 (260)
T ss_pred hhH---hhccCCCCHHHHHHHHHHHHhCC
Confidence 000 00111356799999999998654
No 176
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.02 E-value=0.00013 Score=60.39 Aligned_cols=128 Identities=16% Similarity=0.165 Sum_probs=83.7
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------h----hchHHHHHHHHHhCC
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------V----EDQFKLIAAIKEVGN 54 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~----~~~~~li~aa~~~g~ 54 (258)
+.++.+|+.|.+++.++++ +.|+|||+++... + ...+.++..+++.+
T Consensus 91 ~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~- 169 (293)
T PRK05866 91 AMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG- 169 (293)
T ss_pred EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 6688999999998888876 7899999987421 1 11234444455666
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
..++|. |+.+..... .+....|..+|+.++.+.+. .++.+++++||.+-..+.... . .
T Consensus 170 ~g~iv~isS~~~~~~~---~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~--------~--~- 235 (293)
T PRK05866 170 DGHIINVATWGVLSEA---SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT--------K--A- 235 (293)
T ss_pred CcEEEEECChhhcCCC---CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccc--------c--c-
Confidence 678887 765543211 11234677799998776543 489999999986655432210 0 0
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
. . ....++.+++|+.+..++...
T Consensus 236 -~--~---~~~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 236 -Y--D---GLPALTADEAAEWMVTAARTR 258 (293)
T ss_pred -c--c---CCCCCCHHHHHHHHHHHHhcC
Confidence 0 0 123468899999999988754
No 177
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.01 E-value=0.0001 Score=59.39 Aligned_cols=149 Identities=15% Similarity=0.111 Sum_probs=92.8
Q ss_pred ceeEEeccCCCHHHHHHhhCC--------CcEEEEccCcc---------c----------------hhchHHHHHHHH--
Q 025054 6 NCLIAQGDLHDHESLVKAIKP--------VDVVISAVGRT---------E----------------VEDQFKLIAAIK-- 50 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g--------~d~Vi~~~~~~---------~----------------~~~~~~li~aa~-- 50 (258)
.+.++++|+.|++++.++++. +|++||+++.. . +....++++++.
T Consensus 53 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (253)
T PRK08642 53 RAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPG 132 (253)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 467889999999988887753 89999998631 0 233455666654
Q ss_pred --HhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCC
Q 025054 51 --EVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATA 120 (258)
Q Consensus 51 --~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~ 120 (258)
+.+ ..++|. |+..... +..+...|..+|+.++.+++. .++.++.|+||++-.........
T Consensus 133 ~~~~~-~g~iv~iss~~~~~----~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~----- 202 (253)
T PRK08642 133 MREQG-FGRIINIGTNLFQN----PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATP----- 202 (253)
T ss_pred HHhcC-CeEEEEECCccccC----CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCC-----
Confidence 445 567887 5543221 122345778899999988865 47899999999886542211000
Q ss_pred CCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 121 PPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 121 ~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
. ..............+.+.+|+|+++..++.++. ..|..+.+.|
T Consensus 203 -~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdg 248 (253)
T PRK08642 203 -D-EVFDLIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDG 248 (253)
T ss_pred -H-HHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence 0 000000000011237899999999999998642 3466777764
No 178
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=97.98 E-value=0.0001 Score=59.24 Aligned_cols=150 Identities=11% Similarity=0.136 Sum_probs=86.8
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHH-hCCc--
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKE-VGNI-- 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~-~g~v-- 55 (258)
.+.++.+|++|.+++.++++ ++|+|||+++... +.....++.++.. .. .
T Consensus 53 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~ 131 (248)
T PRK06947 53 RACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLS-TDR 131 (248)
T ss_pred cEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHH-hcC
Confidence 47788999999988876654 5899999997421 1223344443322 22 2
Q ss_pred ----cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCC
Q 025054 56 ----KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPR 123 (258)
Q Consensus 56 ----k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~ 123 (258)
.++|. |+......... ...+|..+|..++.+.+. .++.+++++||++...+...-..+.
T Consensus 132 ~~~~~~ii~~sS~~~~~~~~~---~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~------ 202 (248)
T PRK06947 132 GGRGGAIVNVSSIASRLGSPN---EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPG------ 202 (248)
T ss_pred CCCCcEEEEECchhhcCCCCC---CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHH------
Confidence 24776 65433222110 124578899998866543 4799999999998776532100000
Q ss_pred CceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.....+.....--..+++|+|+.++.++.++. ..|+.+.+.|
T Consensus 203 -~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~g 246 (248)
T PRK06947 203 -RAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGALLDVGG 246 (248)
T ss_pred -HHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCCceEeeCC
Confidence 00000100000114578999999999988763 3456666543
No 179
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.97 E-value=7.9e-05 Score=60.42 Aligned_cols=151 Identities=13% Similarity=0.105 Sum_probs=90.9
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~v 55 (258)
.+.++.+|++|++++.++++ +.|++||+++... +.....++++ .++.+ .
T Consensus 59 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~ 137 (260)
T PRK07063 59 RVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-R 137 (260)
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-C
Confidence 36788999999998888775 6899999997421 2223334444 34455 5
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCC--CCc
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPP--REN 125 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~--~~~ 125 (258)
.++|. |+....... +...+|..+|+.++.+.+. .|+.+..|+||++-..+...+.... .... ...
T Consensus 138 g~iv~isS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~ 212 (260)
T PRK07063 138 GSIVNIASTHAFKII----PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQ-PDPAAARAE 212 (260)
T ss_pred eEEEEECChhhccCC----CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhcc-CChHHHHHH
Confidence 68887 665433221 1234677799999877754 4799999999988655432110000 0000 000
Q ss_pred -eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 126 -ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 126 -~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
...... .-+...+|+|.++..++.+.. -.|+.+.+-|
T Consensus 213 ~~~~~~~----~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdg 252 (260)
T PRK07063 213 TLALQPM----KRIGRPEEVAMTAVFLASDEAPFINATCITIDG 252 (260)
T ss_pred HHhcCCC----CCCCCHHHHHHHHHHHcCccccccCCcEEEECC
Confidence 000000 125678999999999988753 2466666654
No 180
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.95 E-value=0.00012 Score=59.35 Aligned_cols=155 Identities=13% Similarity=0.093 Sum_probs=91.7
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCcc
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNIK 56 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~vk 56 (258)
+.++.+|++|++++.++++ ++|+|||+++... +....++++++.. .+.-.
T Consensus 58 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g 137 (260)
T PRK06198 58 AVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEG 137 (260)
T ss_pred EEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCC
Confidence 5678999999998887765 5799999997521 2334455555543 22124
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
++|. |+....... +....|..+|..++.+.+. .++.++.++||++.......... ............
T Consensus 138 ~iv~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~ 212 (260)
T PRK06198 138 TIVNIGSMSAHGGQ----PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQR-EFHGAPDDWLEK 212 (260)
T ss_pred EEEEECCcccccCC----CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhh-hccCCChHHHHH
Confidence 6776 665432211 1234677799999887763 46899999999988764321100 000000000000
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.........+++.+|+++++..++.++. ..|+.+.+-|
T Consensus 213 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~ 252 (260)
T PRK06198 213 AAATQPFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQ 252 (260)
T ss_pred HhccCCccCCcCHHHHHHHHHHHcChhhCCccCceEeECC
Confidence 0001111236799999999999987653 3577777754
No 181
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.95 E-value=6.4e-05 Score=60.64 Aligned_cols=153 Identities=11% Similarity=0.113 Sum_probs=88.3
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchH----HHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQF----KLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~----~li~aa~~~g~v 55 (258)
.+.++.+|++|++++.++++ ++|+|||+++... +.... .++.++++.+.-
T Consensus 50 ~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 129 (254)
T TIGR02415 50 KAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHG 129 (254)
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCC
Confidence 36788999999998887764 4699999997521 11222 333344443312
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+....... +....|..+|+..+.+++. .++.++.++||.+-......+.... .......
T Consensus 130 ~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~---~~~~~~~ 202 (254)
T TIGR02415 130 GKIINAASIAGHEGN----PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEET---SEIAGKP 202 (254)
T ss_pred eEEEEecchhhcCCC----CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhh---hhcccCc
Confidence 57776 664433221 1245677799998877753 4799999999987654432211000 0000000
Q ss_pred e------ccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEc
Q 025054 128 F------YGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLR 165 (258)
Q Consensus 128 ~------~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~ 165 (258)
+ +......-.+++.+|+++++..++..+. . .|..+.+-
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d 248 (254)
T TIGR02415 203 IGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVD 248 (254)
T ss_pred hHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEec
Confidence 0 0000001136788999999999998753 2 35555554
No 182
>PRK09242 tropinone reductase; Provisional
Probab=97.94 E-value=0.00026 Score=57.31 Aligned_cols=150 Identities=11% Similarity=0.045 Sum_probs=91.0
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v 55 (258)
.+..+.+|+.|.+++.++++ +.|+|||+++... +.....+++++ ++.+ .
T Consensus 61 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 139 (257)
T PRK09242 61 EVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-S 139 (257)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-C
Confidence 46778999999887766554 5799999997521 23344555554 4455 6
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+...... .++...|..+|...+.+++. .++.++.++||++...+...... . ......
T Consensus 140 ~~ii~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~----~-~~~~~~ 210 (257)
T PRK09242 140 SAIVNIGSVSGLTH----VRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLS----D-PDYYEQ 210 (257)
T ss_pred ceEEEECccccCCC----CCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccC----C-hHHHHH
Confidence 78887 66543221 12345677799998887763 47999999999887765332110 0 000000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
+... ....-+...+|++.++..++... . -.|+.+.+.|
T Consensus 211 ~~~~-~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~g 250 (257)
T PRK09242 211 VIER-TPMRRVGEPEEVAAAVAFLCMPAASYITGQCIAVDG 250 (257)
T ss_pred HHhc-CCCCCCcCHHHHHHHHHHHhCcccccccCCEEEECC
Confidence 0000 00012457899999999988754 2 2467777764
No 183
>PRK07985 oxidoreductase; Provisional
Probab=97.92 E-value=0.00022 Score=59.10 Aligned_cols=150 Identities=14% Similarity=0.113 Sum_probs=90.5
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHHh-CCccEE
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKEV-GNIKRF 58 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~-g~vk~~ 58 (258)
+.++.+|++|.+++.++++ ++|++||+++... +.+...+++++... ..-.++
T Consensus 102 ~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~i 181 (294)
T PRK07985 102 AVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASI 181 (294)
T ss_pred EEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEE
Confidence 6678999999988776654 5799999987420 33445666666532 101467
Q ss_pred Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054 59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG 130 (258)
Q Consensus 59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 130 (258)
|. |+....... +....|..+|+.++.+.+. .|+++.+|+||++.+.+....... ........
T Consensus 182 v~iSS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~------~~~~~~~~ 251 (294)
T PRK07985 182 ITTSSIQAYQPS----PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT------QDKIPQFG 251 (294)
T ss_pred EEECCchhccCC----CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCC------HHHHHHHh
Confidence 77 665443221 1234677799998876643 589999999999987653211000 00000011
Q ss_pred CCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 131 DGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 131 ~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.......+...+|+|+++..++.+.. -.|..+.+.|
T Consensus 252 ~~~~~~r~~~pedva~~~~fL~s~~~~~itG~~i~vdg 289 (294)
T PRK07985 252 QQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCG 289 (294)
T ss_pred ccCCCCCCCCHHHHHHHHHhhhChhcCCccccEEeeCC
Confidence 10000125678999999999987653 2366777764
No 184
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.91 E-value=0.00019 Score=57.67 Aligned_cols=152 Identities=16% Similarity=0.041 Sum_probs=90.4
Q ss_pred eEEeccCCCHHHHHHhhC----CCcEEEEccCccc-----------hhchHHHHHHHHHh--CCccEEEc-CCCCCCCCC
Q 025054 8 LIAQGDLHDHESLVKAIK----PVDVVISAVGRTE-----------VEDQFKLIAAIKEV--GNIKRFFP-TEYGSNVDA 69 (258)
Q Consensus 8 ~~~~~D~~d~~~l~~al~----g~d~Vi~~~~~~~-----------~~~~~~li~aa~~~--g~vk~~v~-S~~~~~~~~ 69 (258)
+++.+|++|.+++.++++ +.|+|||+++... +.+...+++++... . -.++|. |+.......
T Consensus 26 ~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-~g~Iv~isS~~~~~~~ 104 (241)
T PRK12428 26 GFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLGLRHLTEALLPRMAP-GGAIVNVASLAGAEWP 104 (241)
T ss_pred HhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHHHHHHHHHHHHhccC-CcEEEEeCcHHhhccc
Confidence 456889999999888876 5899999998532 44556677776543 2 247887 554322100
Q ss_pred C-----------------------CCCCCCccchhhHHHHHHHHH--------hCCCCeEEEecCcccccCcCCCCCCCC
Q 025054 70 G-----------------------HPIEPAKSGYARKAKIRRAIE--------AEGIPHTYVSCNCSFGFFLPTMAQPGA 118 (258)
Q Consensus 70 ~-----------------------~~~~~~~~~~~~k~~~e~~l~--------~~~~~~t~lr~~~~~~~~~~~~~~~~~ 118 (258)
. .+.+...+|..+|..++.+.+ ..|+.++.|+||.+...+........
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~- 183 (241)
T PRK12428 105 QRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSML- 183 (241)
T ss_pred cchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhh-
Confidence 0 112234567779999875542 25799999999998876543211000
Q ss_pred CCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 119 TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 119 ~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
..........+ ...+...+|+|++++.++.++ . -.|+.+.+.|
T Consensus 184 ~~~~~~~~~~~-----~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdg 228 (241)
T PRK12428 184 GQERVDSDAKR-----MGRPATADEQAAVLVFLCSDAARWINGVNLPVDG 228 (241)
T ss_pred hhHhhhhcccc-----cCCCCCHHHHHHHHHHHcChhhcCccCcEEEecC
Confidence 00000000001 012467899999999988654 2 2355566653
No 185
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.91 E-value=0.00014 Score=58.72 Aligned_cols=151 Identities=15% Similarity=0.094 Sum_probs=90.5
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhch----HHHHHHHHHhCC
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQ----FKLIAAIKEVGN 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~----~~li~aa~~~g~ 54 (258)
.+.++.+|++|.+++.++++ +.|+|||+++... +... +.++...++.+
T Consensus 57 ~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~- 135 (253)
T PRK06172 57 EALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG- 135 (253)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence 47788999999998887765 4599999987421 1112 23334444555
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
..++|. |+....... +....|..+|+.++.+.+. .++.+..+.||.+-..+...... . ......
T Consensus 136 ~~~ii~~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~-~---~~~~~~ 207 (253)
T PRK06172 136 GGAIVNTASVAGLGAA----PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYE-A---DPRKAE 207 (253)
T ss_pred CcEEEEECchhhccCC----CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcc-c---ChHHHH
Confidence 567787 654432221 1234566799998877654 47999999999887655432110 0 000000
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
.+... .....+.+.+|+++.+..++.+. . ..|+.+.+.|
T Consensus 208 ~~~~~-~~~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dg 248 (253)
T PRK06172 208 FAAAM-HPVGRIGKVEEVASAVLYLCSDGASFTTGHALMVDG 248 (253)
T ss_pred HHhcc-CCCCCccCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence 00000 00112568999999999998865 2 3567777765
No 186
>PRK05717 oxidoreductase; Validated
Probab=97.90 E-value=0.0002 Score=57.86 Aligned_cols=149 Identities=9% Similarity=0.019 Sum_probs=90.4
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hhchHHHHHHHHH---hCC
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VEDQFKLIAAIKE---VGN 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~---~g~ 54 (258)
.+.++.+|+.|.+++.++++ .+|+|||+++... +....++++++.. ..
T Consensus 57 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~- 135 (255)
T PRK05717 57 NAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH- 135 (255)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-
Confidence 46788999999988766543 4799999997421 3455677777753 22
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
..++|. |+....... +....|..+|+.++.+.+. .++.++.|+||++.+.......... . .......
T Consensus 136 ~g~ii~~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~-~-~~~~~~~ 209 (255)
T PRK05717 136 NGAIVNLASTRARQSE----PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEP-L-SEADHAQ 209 (255)
T ss_pred CcEEEEEcchhhcCCC----CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchH-H-HHHHhhc
Confidence 246666 655433221 1234677799999877764 3588999999998876422110000 0 0000000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.+. ..+.+.+|+|.++..++++.. ..|+.+.+.|
T Consensus 210 ~~~-----~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~g 245 (255)
T PRK05717 210 HPA-----GRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDG 245 (255)
T ss_pred CCC-----CCCcCHHHHHHHHHHHcCchhcCccCcEEEECC
Confidence 010 125688999999998887542 2466666654
No 187
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.90 E-value=0.00019 Score=57.25 Aligned_cols=144 Identities=18% Similarity=0.115 Sum_probs=85.6
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------hhchHHHHHHHHHh--CCccEEE
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------VEDQFKLIAAIKEV--GNIKRFF 59 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------~~~~~~li~aa~~~--g~vk~~v 59 (258)
++.++.+|++|++++.++++ ++|.++++++... +.....+++++... . -.++|
T Consensus 54 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~iv 132 (238)
T PRK05786 54 NIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE-GSSIV 132 (238)
T ss_pred CeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc-CCEEE
Confidence 47889999999998877654 4699999887421 11222233333221 1 13566
Q ss_pred c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccC
Q 025054 60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGD 131 (258)
Q Consensus 60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 131 (258)
. |+.+..... .++...|..+|...+.+++. .+++++++|||++++.+.+.. . .. .. ..
T Consensus 133 ~~ss~~~~~~~---~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~---~---~~--~~--~~- 198 (238)
T PRK05786 133 LVSSMSGIYKA---SPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER---N---WK--KL--RK- 198 (238)
T ss_pred EEecchhcccC---CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh---h---hh--hh--cc-
Confidence 5 654332111 12334577799888755432 589999999999998653210 0 00 00 00
Q ss_pred CCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 132 GQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 132 g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
....+++.+|+++++..++.++. ..|..+.+.|
T Consensus 199 --~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~~ 233 (238)
T PRK05786 199 --LGDDMAPPEDFAKVIIWLLTDEADWVDGVVIPVDG 233 (238)
T ss_pred --ccCCCCCHHHHHHHHHHHhcccccCccCCEEEECC
Confidence 01135788999999999997653 3466666653
No 188
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.90 E-value=0.00014 Score=59.05 Aligned_cols=157 Identities=13% Similarity=0.144 Sum_probs=89.5
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v 55 (258)
.+.++.+|+.|.+++.++++ +.|+|||+++... +.....+++++. +.+ .
T Consensus 55 ~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~ 133 (263)
T PRK08226 55 RCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-D 133 (263)
T ss_pred ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-C
Confidence 36688999999998887765 5799999998521 233344555543 344 5
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+....... .+....|..+|+..+.+.+. .++.++.|+||.+...+...+............+.
T Consensus 134 ~~iv~isS~~~~~~~---~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~ 210 (263)
T PRK08226 134 GRIVMMSSVTGDMVA---DPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLT 210 (263)
T ss_pred cEEEEECcHHhcccC---CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHH
Confidence 67886 554332111 11234566799988877653 47999999999888765432110000000000000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
....+.....+.+.+|+|+++..++... . -.|+.+.+-|
T Consensus 211 ~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dg 251 (263)
T PRK08226 211 EMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDG 251 (263)
T ss_pred HHhccCCCCCCCCHHHHHHHHHHHcCchhcCCcCceEeECC
Confidence 0000000112568999999998887653 2 2355666654
No 189
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.90 E-value=0.00023 Score=57.37 Aligned_cols=150 Identities=11% Similarity=0.048 Sum_probs=87.3
Q ss_pred eeEEeccCCCHHHHHHhhC-------------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC-
Q 025054 7 CLIAQGDLHDHESLVKAIK-------------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG- 53 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g- 53 (258)
+..+..|+.|.+++..+++ +.|++||+++... +.+...+++++...-
T Consensus 56 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~ 135 (252)
T PRK12747 56 AFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR 135 (252)
T ss_pred eEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 4567789988776554331 5899999998421 233344555554321
Q ss_pred CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054 54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN 125 (258)
Q Consensus 54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~ 125 (258)
.-.++|. |+...... .+....|..+|+.++.+.+. .++.+..|.||++...+...... . .....
T Consensus 136 ~~g~iv~isS~~~~~~----~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~-~---~~~~~ 207 (252)
T PRK12747 136 DNSRIINISSAATRIS----LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLS-D---PMMKQ 207 (252)
T ss_pred cCCeEEEECCcccccC----CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhccc-C---HHHHH
Confidence 0247887 66543321 12245677799999877653 58999999999887765322110 0 00000
Q ss_pred eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
. .........+.+++|+|.++..++.... -.|+.+.+.|
T Consensus 208 ~--~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdg 248 (252)
T PRK12747 208 Y--ATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSG 248 (252)
T ss_pred H--HHhcCcccCCCCHHHHHHHHHHHcCccccCcCCcEEEecC
Confidence 0 0000001236789999999999887542 2466677664
No 190
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.90 E-value=0.00024 Score=57.28 Aligned_cols=149 Identities=11% Similarity=0.024 Sum_probs=89.5
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchH----HHHHHHHHhCCc
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQF----KLIAAIKEVGNI 55 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~----~li~aa~~~g~v 55 (258)
+..+.+|+.|.+++.++++ ..|+|||+++... +.... .++..+++.+ .
T Consensus 59 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 137 (252)
T PRK07035 59 AEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-G 137 (252)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-C
Confidence 5678999999988776655 4799999997310 12333 3334445555 6
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.+++. |+...... .++...|..+|+.++.+++. .|++++.|.||.+...+....... .....
T Consensus 138 ~~iv~~sS~~~~~~----~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~------~~~~~ 207 (252)
T PRK07035 138 GSIVNVASVNGVSP----GDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN------DAILK 207 (252)
T ss_pred cEEEEECchhhcCC----CCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC------HHHHH
Confidence 78887 65433221 12345677799999877764 489999999998876543321100 00000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g 166 (258)
..........+...+|+|+.+..++.+.. . .|+.+.+-|
T Consensus 208 ~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dg 248 (252)
T PRK07035 208 QALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECLNVDG 248 (252)
T ss_pred HHHccCCCCCcCCHHHHHHHHHHHhCccccCccCCEEEeCC
Confidence 00000001125678999999999988753 2 466666654
No 191
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.89 E-value=0.00015 Score=58.68 Aligned_cols=149 Identities=14% Similarity=0.159 Sum_probs=92.1
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------hhchHHHHHHHH----HhCCcc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------VEDQFKLIAAIK----EVGNIK 56 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------~~~~~~li~aa~----~~g~vk 56 (258)
.+.++.+|++|.+++.++++ +.|++||+++... +....++++++. +.+ ..
T Consensus 61 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ 139 (255)
T PRK06113 61 QAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GG 139 (255)
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-Cc
Confidence 36678999999998877654 5799999987421 234455666654 334 45
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
++|. |+....... ++...|..+|+.++.+++. .++.++++.||.+..........+.. .. . .
T Consensus 140 ~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~---~~-~--~ 209 (255)
T PRK06113 140 VILTITSMAAENKN----INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEI---EQ-K--M 209 (255)
T ss_pred EEEEEecccccCCC----CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHH---HH-H--H
Confidence 7887 665433211 2344677799999887754 47899999999887654322110000 00 0 0
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
... .....+...+|+++++..++.... -.|+.+++.|
T Consensus 210 ~~~-~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~g 248 (255)
T PRK06113 210 LQH-TPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSG 248 (255)
T ss_pred Hhc-CCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECC
Confidence 000 001125688999999999987642 2467788875
No 192
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.89 E-value=0.00033 Score=59.06 Aligned_cols=134 Identities=19% Similarity=0.142 Sum_probs=82.2
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHH----HHHHHHHhCCcc
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFK----LIAAIKEVGNIK 56 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~----li~aa~~~g~vk 56 (258)
+.++.+|++|.+++.++++ ++|++||+++... +.+..+ ++...++.+ -.
T Consensus 58 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g 136 (330)
T PRK06139 58 VLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HG 136 (330)
T ss_pred EEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CC
Confidence 5678899999998888763 6899999997421 112223 333344555 45
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh--------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA--------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~--------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
++|. |+.+..... +....|..+|+.++.+.+. .++.++.+.||.+..++....... ....
T Consensus 137 ~iV~isS~~~~~~~----p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~-----~~~~-- 205 (330)
T PRK06139 137 IFINMISLGGFAAQ----PYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY-----TGRR-- 205 (330)
T ss_pred EEEEEcChhhcCCC----CCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc-----cccc--
Confidence 7776 554332211 1234677799976654432 379999999998877654221100 0000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR 156 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~ 156 (258)
.....++.+.+|+|++++.++..++
T Consensus 206 ----~~~~~~~~~pe~vA~~il~~~~~~~ 230 (330)
T PRK06139 206 ----LTPPPPVYDPRRVAKAVVRLADRPR 230 (330)
T ss_pred ----ccCCCCCCCHHHHHHHHHHHHhCCC
Confidence 0112246789999999999998763
No 193
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.89 E-value=0.00026 Score=57.97 Aligned_cols=155 Identities=15% Similarity=0.113 Sum_probs=91.7
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------------------------hh
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------------------------VE 40 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------------------------~~ 40 (258)
.+..+.+|+.|.+++.++++ ++|++||+++... ..
T Consensus 60 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 139 (278)
T PRK08277 60 EALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLL 139 (278)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHH
Confidence 36778999999988877654 6899999987310 11
Q ss_pred chHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCC
Q 025054 41 DQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPT 112 (258)
Q Consensus 41 ~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~ 112 (258)
..+.++..+++.+ ..++|. |+...... .++...|..+|+.++.+.+. .++.+..|+||++.......
T Consensus 140 ~~~~~~~~~~~~~-~g~ii~isS~~~~~~----~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~ 214 (278)
T PRK08277 140 PTQVFAKDMVGRK-GGNIINISSMNAFTP----LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRA 214 (278)
T ss_pred HHHHHHHHHHhcC-CcEEEEEccchhcCC----CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhh
Confidence 1234455555555 567887 66543321 12234577799999877754 47999999999998764322
Q ss_pred CCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcC-CC--CCCceEEEcC
Q 025054 113 MAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDD-PR--TLNKTLYLRP 166 (258)
Q Consensus 113 ~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~-~~--~~~~~~~l~g 166 (258)
+............-.+.. .....-+...+|+|+++..++.+ .. -.|..+.+.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~-~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdg 270 (278)
T PRK08277 215 LLFNEDGSLTERANKILA-HTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDG 270 (278)
T ss_pred hhccccccchhHHHHHhc-cCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECC
Confidence 110000000000000000 00111256889999999998887 42 2466777764
No 194
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.88 E-value=0.00017 Score=58.92 Aligned_cols=142 Identities=15% Similarity=0.096 Sum_probs=81.5
Q ss_pred eEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCccE
Q 025054 8 LIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNIKR 57 (258)
Q Consensus 8 ~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~vk~ 57 (258)
.++.+|+.|++++.++++ ++|+|||+++... +.+..++++++ ++.+...+
T Consensus 53 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ 132 (272)
T PRK07832 53 EHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGH 132 (272)
T ss_pred eEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcE
Confidence 457899999888776554 5799999997421 23334455554 23321357
Q ss_pred EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH-------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054 58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE-------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY 129 (258)
Q Consensus 58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (258)
+|. |+....... +....|..+|..++.+.+ ..++++++++||.+.+++.......+............
T Consensus 133 ii~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~ 208 (272)
T PRK07832 133 LVNVSSAAGLVAL----PWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWV 208 (272)
T ss_pred EEEEccccccCCC----CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHH
Confidence 887 665432211 123456678987765553 25899999999999876543321100000000000000
Q ss_pred cCCCceeeeeccchHHHHHHHHhcCC
Q 025054 130 GDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 130 g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
. ......++.+|+|++++.++..+
T Consensus 209 ~--~~~~~~~~~~~vA~~~~~~~~~~ 232 (272)
T PRK07832 209 D--RFRGHAVTPEKAAEKILAGVEKN 232 (272)
T ss_pred H--hcccCCCCHHHHHHHHHHHHhcC
Confidence 0 11123579999999999998643
No 195
>PRK08589 short chain dehydrogenase; Validated
Probab=97.88 E-value=0.00026 Score=57.95 Aligned_cols=154 Identities=12% Similarity=0.113 Sum_probs=89.2
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHhCC
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVGN 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g~ 54 (258)
.+.++.+|++|.+++.++++ +.|++||+++... +...+.++...++.+
T Consensus 55 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~- 133 (272)
T PRK08589 55 KAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG- 133 (272)
T ss_pred eEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence 37789999999988877665 4799999997421 111233444444444
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
.++|. |+....... +....|..+|+.++.+.+. .|+.++.|.||.+...+........ .......+
T Consensus 134 -g~iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~ 207 (272)
T PRK08589 134 -GSIINTSSFSGQAAD----LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTS-EDEAGKTF 207 (272)
T ss_pred -CEEEEeCchhhcCCC----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccc-hhhHHHHH
Confidence 47776 665432211 1234677799999877754 4799999999988765432211000 00000000
Q ss_pred E-eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 127 L-FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 127 ~-~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
. ..........+.+.+|+|+++..++.++. -.|+.+.+.|
T Consensus 208 ~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdg 250 (272)
T PRK08589 208 RENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDG 250 (272)
T ss_pred hhhhhccCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECC
Confidence 0 00000000125688999999999987642 2466677764
No 196
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.88 E-value=0.00027 Score=65.27 Aligned_cols=157 Identities=15% Similarity=0.085 Sum_probs=91.6
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~v 55 (258)
.+..+.+|++|.+++.++++ ++|+|||+++... +.+ .+.++..+++.+.-
T Consensus 466 ~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~ 545 (676)
T TIGR02632 466 RAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLG 545 (676)
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 35678999999999888776 6899999998531 111 22333444444412
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccc-cCc--CCCCCCCC--CCCC
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFG-FFL--PTMAQPGA--TAPP 122 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~-~~~--~~~~~~~~--~~~~ 122 (258)
.++|+ |+.+..... +....|..+|+..+.+++. .++.+..|+||.+.. ... ..+..... ....
T Consensus 546 g~IV~iSS~~a~~~~----~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~ 621 (676)
T TIGR02632 546 GNIVFIASKNAVYAG----KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIP 621 (676)
T ss_pred CEEEEEeChhhcCCC----CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCC
Confidence 46777 664432221 1245677799999887764 479999999998863 211 11000000 0000
Q ss_pred CCc-eEeccCCCceeeeeccchHHHHHHHHhcCC--CCCCceEEEcC
Q 025054 123 REN-ILFYGDGQPKAIFNKEEDIATYTIKAVDDP--RTLNKTLYLRP 166 (258)
Q Consensus 123 ~~~-~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~g 166 (258)
... ...+...+....+++.+|+|+++..++.+. ...|..+++.|
T Consensus 622 ~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDG 668 (676)
T TIGR02632 622 ADELEEHYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDG 668 (676)
T ss_pred hHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence 000 001111122233688999999999988754 23477888865
No 197
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.87 E-value=0.0002 Score=57.95 Aligned_cols=151 Identities=13% Similarity=0.128 Sum_probs=86.7
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hh----chHHHHHHHHHhCC
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VE----DQFKLIAAIKEVGN 54 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~----~~~~li~aa~~~g~ 54 (258)
..++.+|++|.+++.++++ +.|+|||+++... +. ..+.++...++.+
T Consensus 53 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~- 131 (255)
T PRK06057 53 GLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG- 131 (255)
T ss_pred CcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-
Confidence 4678899999998888776 4699999987421 11 1233444444555
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
..++|. |+........ .+...|..+|+..+.+.+. .++.+++|+||++.+.+........ .....+.+
T Consensus 132 ~g~iv~~sS~~~~~g~~---~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~~~~~ 207 (255)
T PRK06057 132 KGSIINTASFVAVMGSA---TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKD-PERAARRL 207 (255)
T ss_pred CcEEEEEcchhhccCCC---CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCC-HHHHHHHH
Confidence 556776 5543222111 1234577789876655442 5899999999999876543211000 00000001
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.....+ .+.+++|+++++..++.+.. ..+..+.+.|
T Consensus 208 ~~~~~~----~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~ 245 (255)
T PRK06057 208 VHVPMG----RFAEPEEIAAAVAFLASDDASFITASTFLVDG 245 (255)
T ss_pred hcCCCC----CCcCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 011111 36789999999988887642 2355565543
No 198
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.87 E-value=0.00053 Score=56.08 Aligned_cols=102 Identities=18% Similarity=0.088 Sum_probs=66.1
Q ss_pred CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH---hCCc
Q 025054 5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE---VGNI 55 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~---~g~v 55 (258)
.+++++.+|+.|.+++.++++ ++|+|||+++... +.+..++++++.. .+ .
T Consensus 44 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~ 122 (274)
T PRK05693 44 AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-R 122 (274)
T ss_pred CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-C
Confidence 467788999999988877653 6799999998421 1233344444422 23 3
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcC
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLP 111 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~ 111 (258)
.++|. |+....... +...+|..+|..++.+.+. .|+.+++++||.+...+..
T Consensus 123 g~iv~isS~~~~~~~----~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~ 182 (274)
T PRK05693 123 GLVVNIGSVSGVLVT----PFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFAS 182 (274)
T ss_pred CEEEEECCccccCCC----CCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccccc
Confidence 56776 554332211 1245677799988776532 5899999999999776543
No 199
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00023 Score=57.87 Aligned_cols=152 Identities=14% Similarity=0.110 Sum_probs=88.8
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------hhchHHHHHHHHH---hCCccE
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------VEDQFKLIAAIKE---VGNIKR 57 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------~~~~~~li~aa~~---~g~vk~ 57 (258)
.+.++.+|++|.+++.++++ ..|++||+++... +.....+++++.. .+ -.+
T Consensus 53 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~ 131 (261)
T PRK08265 53 RARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARG-GGA 131 (261)
T ss_pred eeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcC-CcE
Confidence 47788999999998887765 5699999987421 1222333333322 23 356
Q ss_pred EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054 58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY 129 (258)
Q Consensus 58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (258)
+|. |+....... +....|..+|+.++.+.+. .++.++.|+||++...+...... ... .....+...
T Consensus 132 ii~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~-~~~-~~~~~~~~~ 205 (261)
T PRK08265 132 IVNFTSISAKFAQ----TGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSG-GDR-AKADRVAAP 205 (261)
T ss_pred EEEECchhhccCC----CCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcc-cch-hHHHHhhcc
Confidence 776 654432221 1234577799998877754 47999999999887655332110 000 000000000
Q ss_pred cCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 130 GDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 130 g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
..+.. .+...+|+|+++..+++++. ..|+.+.+.|
T Consensus 206 ~~p~~--r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdg 242 (261)
T PRK08265 206 FHLLG--RVGDPEEVAQVVAFLCSDAASFVTGADYAVDG 242 (261)
T ss_pred cCCCC--CccCHHHHHHHHHHHcCccccCccCcEEEECC
Confidence 00111 24578999999999997652 2466677754
No 200
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.84 E-value=0.00035 Score=55.65 Aligned_cols=150 Identities=17% Similarity=0.144 Sum_probs=88.4
Q ss_pred ceeEEeccCCCH-HHHHHhhCCCcEEEEccCcc----c----------------hhchHHHHHHHH----HhCCccEEEc
Q 025054 6 NCLIAQGDLHDH-ESLVKAIKPVDVVISAVGRT----E----------------VEDQFKLIAAIK----EVGNIKRFFP 60 (258)
Q Consensus 6 gv~~~~~D~~d~-~~l~~al~g~d~Vi~~~~~~----~----------------~~~~~~li~aa~----~~g~vk~~v~ 60 (258)
++.++.+|+.|+ +.+.+.+.++|+|||+++.. . +....++++++. +.+ -.++|+
T Consensus 46 ~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~ 124 (235)
T PRK06550 46 NFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIIN 124 (235)
T ss_pred cEEEEECChHHHHHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEE
Confidence 467888999887 55556666899999999731 0 223344555543 344 457887
Q ss_pred -CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCC
Q 025054 61 -TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDG 132 (258)
Q Consensus 61 -S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g 132 (258)
|+....... +....|..+|+.++.+.+. .+++++.++||++...+........ ... ..+ . ..
T Consensus 125 ~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~--~~~-~~~--~-~~ 194 (235)
T PRK06550 125 MCSIASFVAG----GGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPG--GLA-DWV--A-RE 194 (235)
T ss_pred EcChhhccCC----CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCch--HHH-HHH--h-cc
Confidence 654332211 1234677799988776643 5899999999988765432100000 000 000 0 00
Q ss_pred CceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 133 QPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 133 ~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.....+...+|+|.++..++.++. ..+..+.+.|
T Consensus 195 ~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~g 230 (235)
T PRK06550 195 TPIKRWAEPEEVAELTLFLASGKADYMQGTIVPIDG 230 (235)
T ss_pred CCcCCCCCHHHHHHHHHHHcChhhccCCCcEEEECC
Confidence 111236788999999999987642 2456666654
No 201
>PRK12742 oxidoreductase; Provisional
Probab=97.84 E-value=0.00037 Score=55.54 Aligned_cols=148 Identities=11% Similarity=0.097 Sum_probs=87.4
Q ss_pred ceeEEeccCCCHHHHHHhhC---CCcEEEEccCccc-------------------hhchHHHHHHHHHh-CCccEEEc-C
Q 025054 6 NCLIAQGDLHDHESLVKAIK---PVDVVISAVGRTE-------------------VEDQFKLIAAIKEV-GNIKRFFP-T 61 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~-g~vk~~v~-S 61 (258)
+++++.+|++|.+++.++++ +.|++||+++... +.....++.++... ....++|. |
T Consensus 52 ~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 131 (237)
T PRK12742 52 GATAVQTDSADRDAVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIG 131 (237)
T ss_pred CCeEEecCCCCHHHHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 56788899999888877765 4799999987531 12223333333322 11357776 6
Q ss_pred CCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCc
Q 025054 62 EYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQP 134 (258)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~ 134 (258)
+...... +.++...|..+|+.++.+++. .++.++.|+||.+...+.+... . ..........
T Consensus 132 S~~~~~~---~~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~-~----~~~~~~~~~~---- 199 (237)
T PRK12742 132 SVNGDRM---PVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG-P----MKDMMHSFMA---- 199 (237)
T ss_pred ccccccC---CCCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc-H----HHHHHHhcCC----
Confidence 5443211 112345677899999977753 5799999999988765432110 0 0000000000
Q ss_pred eeeeeccchHHHHHHHHhcCCC-C-CCceEEEc
Q 025054 135 KAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLR 165 (258)
Q Consensus 135 ~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~ 165 (258)
...+.+.+|+++++..++++.. . .|..+.+-
T Consensus 200 ~~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~d 232 (237)
T PRK12742 200 IKRHGRPEEVAGMVAWLAGPEASFVTGAMHTID 232 (237)
T ss_pred CCCCCCHHHHHHHHHHHcCcccCcccCCEEEeC
Confidence 0125688999999999887652 2 35555554
No 202
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.83 E-value=0.00037 Score=56.25 Aligned_cols=150 Identities=11% Similarity=0.082 Sum_probs=89.0
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v 55 (258)
.+..+.+|++|++++.++++ ++|++||+++... +.....+++++. +.++-
T Consensus 59 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 138 (253)
T PRK05867 59 KVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQG 138 (253)
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCC
Confidence 46778999999998887764 6899999987521 233344444443 33211
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+......... .....|..+|+.++.+.+. .|+.+..|+||.+-..+....... . ...
T Consensus 139 g~iv~~sS~~~~~~~~~--~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~-----~-~~~- 209 (253)
T PRK05867 139 GVIINTASMSGHIINVP--QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEY-----Q-PLW- 209 (253)
T ss_pred cEEEEECcHHhcCCCCC--CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHH-----H-HHH-
Confidence 35666 55432211100 0124577799999877764 489999999999876543221100 0 000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
....+. -.+...+|+|+++..++.+.. -.|+.+.+-|
T Consensus 210 ~~~~~~--~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdg 248 (253)
T PRK05867 210 EPKIPL--GRLGRPEELAGLYLYLASEASSYMTGSDIVIDG 248 (253)
T ss_pred HhcCCC--CCCcCHHHHHHHHHHHcCcccCCcCCCeEEECC
Confidence 000000 125689999999999987642 2466777764
No 203
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.82 E-value=0.00053 Score=55.48 Aligned_cols=145 Identities=14% Similarity=0.029 Sum_probs=88.6
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v 55 (258)
.+.++.+|++|.+++.++++ +.|+|||+++... +.....+++++.. .+ -
T Consensus 68 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~ 146 (256)
T PRK12748 68 RCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-G 146 (256)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-C
Confidence 37889999999988777664 4799999987421 2334555655543 23 4
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+...... .+....|..+|+.++.+++. .++.++.++||.+...+.... .. ..-...
T Consensus 147 ~~iv~~ss~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~--~~----~~~~~~ 216 (256)
T PRK12748 147 GRIINLTSGQSLGP----MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEE--LK----HHLVPK 216 (256)
T ss_pred eEEEEECCccccCC----CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChh--HH----Hhhhcc
Confidence 57887 65433211 12244677799999987654 479999999998766543210 00 000000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.+. ..+...+|+|+.+..++.... ..++.+++.|
T Consensus 217 ~~~-----~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~ 252 (256)
T PRK12748 217 FPQ-----GRVGEPVDAARLIAFLVSEEAKWITGQVIHSEG 252 (256)
T ss_pred CCC-----CCCcCHHHHHHHHHHHhCcccccccCCEEEecC
Confidence 111 124467999999988887642 2366777753
No 204
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.80 E-value=0.00033 Score=56.35 Aligned_cols=148 Identities=13% Similarity=0.079 Sum_probs=86.9
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc----------------------------hhch----HHHH
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE----------------------------VEDQ----FKLI 46 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~----------------------------~~~~----~~li 46 (258)
.+.++.+|+.|.+++.++++ +.|+|||+++... +... +.++
T Consensus 55 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 134 (253)
T PRK08217 55 EVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAA 134 (253)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 35678999999888766554 4699999987311 1111 2223
Q ss_pred HHHHHhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCC
Q 025054 47 AAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGA 118 (258)
Q Consensus 47 ~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~ 118 (258)
....+...-.+++. |+.+.. . .++...|..+|+.++.+++. .++..+.++||.+.+.+..... +.
T Consensus 135 ~~l~~~~~~~~iv~~ss~~~~-~----~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~-~~- 207 (253)
T PRK08217 135 AKMIESGSKGVIINISSIARA-G----NMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK-PE- 207 (253)
T ss_pred HHHHhcCCCeEEEEEcccccc-C----CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC-HH-
Confidence 33333321235666 554322 1 12345677799988876543 5799999999998765432210 00
Q ss_pred CCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054 119 TAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP 166 (258)
Q Consensus 119 ~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g 166 (258)
.............+.+.+|+++++..++......|+.+++.|
T Consensus 208 ------~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~g 249 (253)
T PRK08217 208 ------ALERLEKMIPVGRLGEPEEIAHTVRFIIENDYVTGRVLEIDG 249 (253)
T ss_pred ------HHHHHHhcCCcCCCcCHHHHHHHHHHHHcCCCcCCcEEEeCC
Confidence 000000111112356889999999999876434677888875
No 205
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.79 E-value=0.00061 Score=55.01 Aligned_cols=149 Identities=15% Similarity=0.086 Sum_probs=88.8
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHH----HHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIA----AIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~----aa~~~g~v 55 (258)
.+.++.+|++|.+++.++++ +.|++||+++... +.....+.+ ..++.+.-
T Consensus 56 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~ 135 (251)
T PRK12481 56 KFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNG 135 (251)
T ss_pred eEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCC
Confidence 36788999999998888775 5799999987421 222233333 33333312
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce-
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI- 126 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~- 126 (258)
.++|. |+....... +....|..+|+.++.+.+. .|+.+..|+||.+...+...+.... .....+
T Consensus 136 g~ii~isS~~~~~~~----~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~---~~~~~~~ 208 (251)
T PRK12481 136 GKIINIASMLSFQGG----IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADT---ARNEAIL 208 (251)
T ss_pred CEEEEeCChhhcCCC----CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccCh---HHHHHHH
Confidence 46776 554332211 1234577799999877653 5899999999988765432211000 000000
Q ss_pred -EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 127 -LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 127 -~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.++ . ..+...+|+|.++..++.+.. -.|+.+.+.|
T Consensus 209 ~~~p---~--~~~~~peeva~~~~~L~s~~~~~~~G~~i~vdg 246 (251)
T PRK12481 209 ERIP---A--SRWGTPDDLAGPAIFLSSSASDYVTGYTLAVDG 246 (251)
T ss_pred hcCC---C--CCCcCHHHHHHHHHHHhCccccCcCCceEEECC
Confidence 011 1 125789999999999997642 3466666654
No 206
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00058 Score=55.20 Aligned_cols=149 Identities=11% Similarity=0.058 Sum_probs=87.4
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCC-
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGN- 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~- 54 (258)
++.++.+|+++.+++.++++ ++|++||+++... +.....+++++. +...
T Consensus 59 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 138 (258)
T PRK06949 59 AAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKG 138 (258)
T ss_pred cEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCc
Confidence 47889999999998888776 5899999998421 223334444432 2220
Q ss_pred ------ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCC
Q 025054 55 ------IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATA 120 (258)
Q Consensus 55 ------vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~ 120 (258)
..++|. |+...... .+...+|..+|+..+.+.+. .++++++|+||++.+.+..... .
T Consensus 139 ~~~~~~~g~iv~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~--~--- 209 (258)
T PRK06949 139 AGNTKPGGRIINIASVAGLRV----LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHW--E--- 209 (258)
T ss_pred CCCCCCCeEEEEECcccccCC----CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhcc--C---
Confidence 146776 55433211 12345677799988776653 4799999999999876532210 0
Q ss_pred CCCCceEeccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEc
Q 025054 121 PPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLR 165 (258)
Q Consensus 121 ~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~ 165 (258)
......+...-. ...+...+|+++++..++.+.. . .|..+.+-
T Consensus 210 -~~~~~~~~~~~~-~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~d 254 (258)
T PRK06949 210 -TEQGQKLVSMLP-RKRVGKPEDLDGLLLLLAADESQFINGAIISAD 254 (258)
T ss_pred -hHHHHHHHhcCC-CCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeC
Confidence 000000010000 1135568999999999988642 2 35555554
No 207
>PRK05855 short chain dehydrogenase; Validated
Probab=97.77 E-value=0.00029 Score=63.85 Aligned_cols=101 Identities=13% Similarity=0.039 Sum_probs=66.7
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHH----HHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~v 55 (258)
++.++.+|++|++++.++++ ++|++||+++... +.+..+++++ .++.+.-
T Consensus 365 ~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~ 444 (582)
T PRK05855 365 VAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTG 444 (582)
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence 46888999999998887775 4799999997531 2223344443 3344311
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCc
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFL 110 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~ 110 (258)
.++|. |+..+.... +....|..+|+.++.+.+. .|+.++.|+||.+-..+.
T Consensus 445 g~iv~~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 503 (582)
T PRK05855 445 GHIVNVASAAAYAPS----RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIV 503 (582)
T ss_pred cEEEEECChhhccCC----CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccch
Confidence 47777 665433211 2345677899988766542 589999999998866543
No 208
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.76 E-value=0.00031 Score=56.38 Aligned_cols=153 Identities=17% Similarity=0.144 Sum_probs=87.6
Q ss_pred eeEEeccCCCHHHHHHhh-------CCCcEEEEccCccc-------------------hhchHHHHHHHHH--hCCccEE
Q 025054 7 CLIAQGDLHDHESLVKAI-------KPVDVVISAVGRTE-------------------VEDQFKLIAAIKE--VGNIKRF 58 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al-------~g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~--~g~vk~~ 58 (258)
+.++.+|+.|.+++...+ .++|+|||+++... +....++++++.. .. ..++
T Consensus 54 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~ 132 (249)
T PRK06500 54 ALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN-PASI 132 (249)
T ss_pred eEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-CCEE
Confidence 567889999887765543 36899999997421 3445677777764 12 2344
Q ss_pred Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc
Q 025054 59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG 130 (258)
Q Consensus 59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 130 (258)
|. |+....... +...+|..+|+..+.+++. .++++++++||.+.+.+.......... .....-.+..
T Consensus 133 i~~~S~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~-~~~~~~~~~~ 207 (249)
T PRK06500 133 VLNGSINAHIGM----PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEAT-LDAVAAQIQA 207 (249)
T ss_pred EEEechHhccCC----CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccc-hHHHHHHHHh
Confidence 44 543332211 2345677799999887743 489999999999887653221000000 0000000000
Q ss_pred CCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 131 DGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 131 ~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.....-+.+.+|+|+++..++.++. ..|..+.+.|
T Consensus 208 -~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~g 244 (249)
T PRK06500 208 -LVPLGRFGTPEEIAKAVLYLASDESAFIVGSEIIVDG 244 (249)
T ss_pred -cCCCCCCcCHHHHHHHHHHHcCccccCccCCeEEECC
Confidence 0000114588999999999887642 2355555553
No 209
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.76 E-value=0.0003 Score=57.11 Aligned_cols=150 Identities=16% Similarity=0.077 Sum_probs=88.9
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc---------c--------------------hhchHHHHHHH
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT---------E--------------------VEDQFKLIAAI 49 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~---------~--------------------~~~~~~li~aa 49 (258)
.+.++.+|++|++++.++++ ++|++||+++.. . +...+.++...
T Consensus 60 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 139 (260)
T PRK08416 60 KAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRM 139 (260)
T ss_pred ceEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhh
Confidence 36788999999988877665 479999998521 0 11123344444
Q ss_pred HHhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCC
Q 025054 50 KEVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAP 121 (258)
Q Consensus 50 ~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~ 121 (258)
++.+ -.++|. |+.+.... .+....|..+|+.++.+.+. .|+.+..|.||.+-..+...+...
T Consensus 140 ~~~~-~g~iv~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~----- 209 (260)
T PRK08416 140 EKVG-GGSIISLSSTGNLVY----IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNY----- 209 (260)
T ss_pred hccC-CEEEEEEeccccccC----CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCC-----
Confidence 4445 467887 66543221 11234677799999877754 489999999998765542211100
Q ss_pred CCCceEeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 122 PRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 122 ~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
....-.+... .....+.+.+|+|.+++.++.++ . -.|+.+.+.|
T Consensus 210 ~~~~~~~~~~-~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdg 255 (260)
T PRK08416 210 EEVKAKTEEL-SPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDG 255 (260)
T ss_pred HHHHHHHHhc-CCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcC
Confidence 0000000000 00012568999999999998764 2 2466666654
No 210
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.72 E-value=0.00068 Score=55.04 Aligned_cols=150 Identities=12% Similarity=0.055 Sum_probs=87.6
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~v 55 (258)
.+.++.+|++|.+++.++++ +.|+|||+++... +.....+++++ +..+.-
T Consensus 70 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 149 (262)
T PRK07831 70 RVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHG 149 (262)
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence 47788999999988877664 5799999998421 22223333333 332212
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+....... ++...|..+|+.++.+.+. .++.+..|+||.+...+....... ....
T Consensus 150 g~iv~~ss~~~~~~~----~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~-------~~~~ 218 (262)
T PRK07831 150 GVIVNNASVLGWRAQ----HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSA-------ELLD 218 (262)
T ss_pred cEEEEeCchhhcCCC----CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCH-------HHHH
Confidence 35665 443222111 1244577799999887753 579999999998887654321100 0000
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.........-+...+|+|+++..++.+.. -.|+.+.+.+
T Consensus 219 ~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~ 259 (262)
T PRK07831 219 ELAAREAFGRAAEPWEVANVIAFLASDYSSYLTGEVVSVSS 259 (262)
T ss_pred HHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence 00000001125678999999999887652 2466666653
No 211
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00088 Score=53.67 Aligned_cols=127 Identities=17% Similarity=0.053 Sum_probs=84.1
Q ss_pred ceeEEeccCCCHHHHHHhhCC----CcEEEEccCccc-------------------hhchHHHHHHHHHh--CCccEEEc
Q 025054 6 NCLIAQGDLHDHESLVKAIKP----VDVVISAVGRTE-------------------VEDQFKLIAAIKEV--GNIKRFFP 60 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g----~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~--g~vk~~v~ 60 (258)
++.++.+|++|.+++.+++++ .|.+++.++... +.+..++++++... + -+++|.
T Consensus 47 ~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~iv~ 125 (240)
T PRK06101 47 NIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-GHRVVI 125 (240)
T ss_pred CCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCeEEE
Confidence 478889999999999998875 477777775311 34456777776642 2 245665
Q ss_pred -CCCCCCCCCCCCCCCCccchhhHHHHHHHHH-------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCC
Q 025054 61 -TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE-------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDG 132 (258)
Q Consensus 61 -S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g 132 (258)
|+....... +....|..+|+.++.+.+ ..++.++.++||++.+.+.... ..
T Consensus 126 isS~~~~~~~----~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~-----------~~------ 184 (240)
T PRK06101 126 VGSIASELAL----PRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN-----------TF------ 184 (240)
T ss_pred EechhhccCC----CCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC-----------CC------
Confidence 554332221 224467779999987754 3589999999999877543210 00
Q ss_pred CceeeeeccchHHHHHHHHhcCC
Q 025054 133 QPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 133 ~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
..+ ..++.+|+++.+...++..
T Consensus 185 ~~~-~~~~~~~~a~~i~~~i~~~ 206 (240)
T PRK06101 185 AMP-MIITVEQASQEIRAQLARG 206 (240)
T ss_pred CCC-cccCHHHHHHHHHHHHhcC
Confidence 001 1468999999999988764
No 212
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.69 E-value=0.00096 Score=54.12 Aligned_cols=150 Identities=15% Similarity=0.117 Sum_probs=87.1
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK 56 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk 56 (258)
+.++.+|++|.+++.++++ ++|++||+++... +...+.++..+++.+.-.
T Consensus 59 ~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g 138 (261)
T PRK08936 59 AIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKG 138 (261)
T ss_pred EEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc
Confidence 5678999999998877664 5799999998531 112234455555544124
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
++|. |+...... .+....|..+|+..+.+.+. .++.++.|+||.+...+..... .. ... ...+
T Consensus 139 ~iv~~sS~~~~~~----~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~---~~~-~~~~ 209 (261)
T PRK08936 139 NIINMSSVHEQIP----WPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKF-AD---PKQ-RADV 209 (261)
T ss_pred EEEEEccccccCC----CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCcccccc-CC---HHH-HHHH
Confidence 6776 66433221 12345677799877765543 5899999999988765432100 00 000 0000
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCC-CC-CCceEEEcC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDP-RT-LNKTLYLRP 166 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~-~~~~~~l~g 166 (258)
........+...+|+++.+..++.++ .. .|..+.+.|
T Consensus 210 -~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~ 248 (261)
T PRK08936 210 -ESMIPMGYIGKPEEIAAVAAWLASSEASYVTGITLFADG 248 (261)
T ss_pred -HhcCCCCCCcCHHHHHHHHHHHcCcccCCccCcEEEECC
Confidence 00000113667899999999998865 22 344555543
No 213
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.00059 Score=55.29 Aligned_cols=161 Identities=14% Similarity=0.085 Sum_probs=93.3
Q ss_pred ceeEEeccCCCHHHHHHhh-------CCCcEEEEccCccc---------------------h----hchHHHHHHHHHhC
Q 025054 6 NCLIAQGDLHDHESLVKAI-------KPVDVVISAVGRTE---------------------V----EDQFKLIAAIKEVG 53 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al-------~g~d~Vi~~~~~~~---------------------~----~~~~~li~aa~~~g 53 (258)
++.++.+|+.|.+++.+++ .+.|+|||+++... + ...+.++..+++.+
T Consensus 50 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 129 (260)
T PRK06523 50 GVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG 129 (260)
T ss_pred ceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC
Confidence 4678899999998776544 36799999997310 1 22244455556666
Q ss_pred CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCC-CCCC---CCC
Q 025054 54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMA-QPGA---TAP 121 (258)
Q Consensus 54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~-~~~~---~~~ 121 (258)
..++|. |+........ .....|..+|+.++.+.+. .++.+++|+||++.......+. .... ...
T Consensus 130 -~g~ii~isS~~~~~~~~---~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~ 205 (260)
T PRK06523 130 -SGVIIHVTSIQRRLPLP---ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDY 205 (260)
T ss_pred -CcEEEEEecccccCCCC---CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCH
Confidence 678887 6654332111 1245677799998876643 5799999999999876532110 0000 000
Q ss_pred CCCceEec-cCCCce-eeeeccchHHHHHHHHhcCC-C-CCCceEEEcCCCCcc
Q 025054 122 PRENILFY-GDGQPK-AIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRPPKNIY 171 (258)
Q Consensus 122 ~~~~~~~~-g~g~~~-~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g~~~~~ 171 (258)
......+. .-+..+ ..+...+|+|+++..++.+. . ..|+.+.+.| +...
T Consensus 206 ~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdg-g~~~ 258 (260)
T PRK06523 206 EGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDG-GTVP 258 (260)
T ss_pred HHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhCcccccccCceEEecC-CccC
Confidence 00000000 000011 12457899999999998764 2 3467787876 4343
No 214
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.00056 Score=63.11 Aligned_cols=128 Identities=17% Similarity=0.209 Sum_probs=85.6
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hh----chHHHHHHHHHhC
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VE----DQFKLIAAIKEVG 53 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~----~~~~li~aa~~~g 53 (258)
.+.++.+|+.|.+++.++++ ++|++||+++... +. ..+.++..+++.+
T Consensus 421 ~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 500 (657)
T PRK07201 421 TAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR 500 (657)
T ss_pred cEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Confidence 47788999999999888776 5899999998420 11 1233444455666
Q ss_pred CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054 54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN 125 (258)
Q Consensus 54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~ 125 (258)
..++|. |+.+..... +....|..+|+.++.+.+. .++.++.|+||.+...+.... ..
T Consensus 501 -~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~----------~~ 565 (657)
T PRK07201 501 -FGHVVNVSSIGVQTNA----PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT----------KR 565 (657)
T ss_pred -CCEEEEECChhhcCCC----CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc----------cc
Confidence 778887 765543221 1234577799999877753 589999999998876543210 00
Q ss_pred eEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
.+ .....+.+++|+.++..+...
T Consensus 566 ---~~----~~~~~~~~~~a~~i~~~~~~~ 588 (657)
T PRK07201 566 ---YN----NVPTISPEEAADMVVRAIVEK 588 (657)
T ss_pred ---cc----CCCCCCHHHHHHHHHHHHHhC
Confidence 01 123578999999999987643
No 215
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.67 E-value=0.00061 Score=54.98 Aligned_cols=132 Identities=18% Similarity=0.192 Sum_probs=88.2
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK 56 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk 56 (258)
++++..|++|++++.+... .+|++|+.+|... ...++.++.-..+.+ --
T Consensus 58 v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G 136 (265)
T COG0300 58 VEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AG 136 (265)
T ss_pred EEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-Cc
Confidence 6789999999988877654 5899999998642 345566666666666 56
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHH-------HHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRR-------AIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~-------~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
++|- +|.++.... +-..-|..+|+.+-. .|+..|+.++.+.||.....|.. ... . . . .
T Consensus 137 ~IiNI~S~ag~~p~----p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~~~-~----~--~-~- 202 (265)
T COG0300 137 HIINIGSAAGLIPT----PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-AKG-S----D--V-Y- 202 (265)
T ss_pred eEEEEechhhcCCC----cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-ccc-c----c--c-c-
Confidence 7886 554433221 123456679988743 34457899999999998887764 110 0 0 0 0
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
.. .....+.+.+|+|+.+...+...
T Consensus 203 ~~--~~~~~~~~~~~va~~~~~~l~~~ 227 (265)
T COG0300 203 LL--SPGELVLSPEDVAEAALKALEKG 227 (265)
T ss_pred cc--cchhhccCHHHHHHHHHHHHhcC
Confidence 00 11235789999999999999754
No 216
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.0018 Score=52.62 Aligned_cols=132 Identities=15% Similarity=0.142 Sum_probs=80.8
Q ss_pred ceeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCcc
Q 025054 6 NCLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNIK 56 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~vk 56 (258)
.+.++.+|+.|.+++.++++ ++|+|||+++... +.+..++++++. +.+ ..
T Consensus 54 ~~~~~~~D~~d~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~ 132 (263)
T PRK09072 54 RHRWVVADLTSEAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SA 132 (263)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CC
Confidence 57889999999988776654 5799999987521 233344555543 343 45
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
++|. |+....... +....|..+|+.++.+++. .++.++.+.||.+...+...... ..
T Consensus 133 ~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~---------~~-- 197 (263)
T PRK09072 133 MVVNVGSTFGSIGY----PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQ---------AL-- 197 (263)
T ss_pred EEEEecChhhCcCC----CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcc---------cc--
Confidence 6665 443222211 1234566799988766543 47899999998776543211100 00
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
.. .....+.+.+|+|+.++.+++..
T Consensus 198 ~~--~~~~~~~~~~~va~~i~~~~~~~ 222 (263)
T PRK09072 198 NR--ALGNAMDDPEDVAAAVLQAIEKE 222 (263)
T ss_pred cc--cccCCCCCHHHHHHHHHHHHhCC
Confidence 00 00113568899999999999865
No 217
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.59 E-value=0.0019 Score=52.79 Aligned_cols=132 Identities=12% Similarity=0.103 Sum_probs=82.4
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHH----hCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----VGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~g~v 55 (258)
.+.++.+|++|++++.++++ +.|+|||+++... +.+..++++++.. .+ -
T Consensus 63 ~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~ 141 (273)
T PRK08278 63 QALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-N 141 (273)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-C
Confidence 36688999999998887765 6799999998521 2344566666643 33 2
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccc-cCcCCCCCCCCCCCCCCce
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFG-FFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~-~~~~~~~~~~~~~~~~~~~ 126 (258)
.+++. |+....... ..++...|..+|+.++.+++. .++.++.|.||.+.. .+...+. ..
T Consensus 142 g~iv~iss~~~~~~~--~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~-------~~--- 209 (273)
T PRK08278 142 PHILTLSPPLNLDPK--WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLL-------GG--- 209 (273)
T ss_pred CEEEEECCchhcccc--ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcc-------cc---
Confidence 45665 543322111 012345677899999988764 479999999985433 2111100 00
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
......+...+|+|+.++.++..+
T Consensus 210 -----~~~~~~~~~p~~va~~~~~l~~~~ 233 (273)
T PRK08278 210 -----DEAMRRSRTPEIMADAAYEILSRP 233 (273)
T ss_pred -----cccccccCCHHHHHHHHHHHhcCc
Confidence 011113568899999999998775
No 218
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.58 E-value=0.0015 Score=52.70 Aligned_cols=150 Identities=11% Similarity=0.058 Sum_probs=87.6
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCcc
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNIK 56 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~vk 56 (258)
+..+.+|++|.+++.++++ +.|++||+++... +.....+++++. +.+.-.
T Consensus 59 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g 138 (253)
T PRK08993 59 FLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGG 138 (253)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCe
Confidence 6678999999988887775 5799999997521 233334444443 332113
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
++|. |+....... +....|..+|+.++.+.+. .|+.++.++||++-..+...+... ......+
T Consensus 139 ~iv~isS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~-----~~~~~~~ 209 (253)
T PRK08993 139 KIINIASMLSFQGG----IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRAD-----EQRSAEI 209 (253)
T ss_pred EEEEECchhhccCC----CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccc-----hHHHHHH
Confidence 6666 554322211 1123566699998876653 589999999999977653321100 0000000
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP 166 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g 166 (258)
...-.. .-+...+|+|+.+..++.+.. . .|..+.+.|
T Consensus 210 ~~~~p~-~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~dg 248 (253)
T PRK08993 210 LDRIPA-GRWGLPSDLMGPVVFLASSASDYINGYTIAVDG 248 (253)
T ss_pred HhcCCC-CCCcCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 000001 126678999999999998652 2 455665543
No 219
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=97.56 E-value=0.0009 Score=52.71 Aligned_cols=184 Identities=16% Similarity=0.160 Sum_probs=113.4
Q ss_pred eeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---------------hhchHHHHHHHHHhC---CccEEEcCC---C
Q 025054 7 CLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---------------VEDQFKLIAAIKEVG---NIKRFFPTE---Y 63 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---------------~~~~~~li~aa~~~g---~vk~~v~S~---~ 63 (258)
.++..||++|...|.+.+. ..+-|+|+++... ..++.+|++|.+.++ +|+-+-.|+ |
T Consensus 85 mkLHYgDmTDss~L~k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSEly 164 (376)
T KOG1372|consen 85 MKLHYGDMTDSSCLIKLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELY 164 (376)
T ss_pred eEEeeccccchHHHHHHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhc
Confidence 5778899999999999887 4577888877542 356789999998875 144333343 4
Q ss_pred CCCC----CCCCCCCCCccchhhHHHHHH----HHHhCCCCeEEEecCcccccCcCCCCC----------CCCCCCCCCc
Q 025054 64 GSNV----DAGHPIEPAKSGYARKAKIRR----AIEAEGIPHTYVSCNCSFGFFLPTMAQ----------PGATAPPREN 125 (258)
Q Consensus 64 ~~~~----~~~~~~~~~~~~~~~k~~~e~----~l~~~~~~~t~lr~~~~~~~~~~~~~~----------~~~~~~~~~~ 125 (258)
|-.. .+..+.-|.+||..+|-..-- +-++.++ +-+.|+.|..-.|.... .+.+-+....
T Consensus 165 Gkv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnm---fAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe 241 (376)
T KOG1372|consen 165 GKVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNM---FACNGILFNHESPRRGENFVTRKITRSVAKISLGQQE 241 (376)
T ss_pred ccccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcc---eeeccEeecCCCCccccchhhHHHHHHHHHhhhccee
Confidence 4221 122344466777665544321 1112222 22344455422221100 0001122223
Q ss_pred eEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHH
Q 025054 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTED 196 (258)
Q Consensus 126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~ 196 (258)
....|+-+..++|=+..|..+++...|.++ ....|.|.. ++..|.+|+.+..-...|+.+.++.-..+
T Consensus 242 ~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d--~PdDfViAT-ge~hsVrEF~~~aF~~ig~~l~Weg~gv~ 309 (376)
T KOG1372|consen 242 KIELGNLSALRDWGHAGDYVEAMWLMLQQD--SPDDFVIAT-GEQHSVREFCNLAFAEIGEVLNWEGEGVD 309 (376)
T ss_pred eEEecchhhhcccchhHHHHHHHHHHHhcC--CCCceEEec-CCcccHHHHHHHHHHhhCcEEeecccccc
Confidence 445688889999999999999999999876 333455543 57999999999999999987777654443
No 220
>PRK07578 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.002 Score=49.96 Aligned_cols=132 Identities=20% Similarity=0.162 Sum_probs=82.2
Q ss_pred EEeccCCCHHHHHHhhC---CCcEEEEccCccc-------------------hhchHHHHHHHHHh--CCccEEEc-CCC
Q 025054 9 IAQGDLHDHESLVKAIK---PVDVVISAVGRTE-------------------VEDQFKLIAAIKEV--GNIKRFFP-TEY 63 (258)
Q Consensus 9 ~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~--g~vk~~v~-S~~ 63 (258)
.+.+|+.|.+++.++++ +.|+|||+++... +....++++++... + -.+++. |+.
T Consensus 35 ~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~g~iv~iss~ 113 (199)
T PRK07578 35 DVQVDITDPASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-GGSFTLTSGI 113 (199)
T ss_pred ceEecCCChHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCeEEEEccc
Confidence 46789999998888776 6899999997421 22334566665431 2 245776 554
Q ss_pred CCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceee
Q 025054 64 GSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAI 137 (258)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 137 (258)
..... .+....|..+|+.++.+.+. .++.++.|+||++-..+... . . .+++ ..
T Consensus 114 ~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~----~-------~-~~~~-----~~ 172 (199)
T PRK07578 114 LSDEP----IPGGASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEKY----G-------P-FFPG-----FE 172 (199)
T ss_pred ccCCC----CCCchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhhh----h-------h-cCCC-----CC
Confidence 43221 12244577799988876653 47899999998775432110 0 0 0111 13
Q ss_pred eeccchHHHHHHHHhcCCCCCCceEE
Q 025054 138 FNKEEDIATYTIKAVDDPRTLNKTLY 163 (258)
Q Consensus 138 ~v~~~D~a~~~~~~l~~~~~~~~~~~ 163 (258)
++..+|+|+.+..+++.. ..|+.++
T Consensus 173 ~~~~~~~a~~~~~~~~~~-~~g~~~~ 197 (199)
T PRK07578 173 PVPAARVALAYVRSVEGA-QTGEVYK 197 (199)
T ss_pred CCCHHHHHHHHHHHhccc-eeeEEec
Confidence 578999999999998764 2455554
No 221
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=97.50 E-value=0.0016 Score=51.98 Aligned_cols=146 Identities=13% Similarity=0.076 Sum_probs=87.1
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH-----HHhCC
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI-----KEVGN 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa-----~~~g~ 54 (258)
.+.++.+|++|.+++.++++ +.|++||+++... +....++++++ ++.+
T Consensus 49 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~- 127 (239)
T TIGR01831 49 NARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ- 127 (239)
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-
Confidence 37889999999998877665 4699999887421 23344555554 2234
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
..++|. |+....... +....|..+|+..+.+.+. .++.++.++||.+...+....... .....
T Consensus 128 ~~~iv~vsS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~ 198 (239)
T TIGR01831 128 GGRIITLASVSGVMGN----RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHD-----LDEAL 198 (239)
T ss_pred CeEEEEEcchhhccCC----CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHH-----HHHHH
Confidence 467887 664332221 1234566789877655542 589999999998876654321100 00000
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCC-CC-CCceEEEc
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP-RT-LNKTLYLR 165 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~-~~~~~~l~ 165 (258)
...+ ...+...+|+|+++..++..+ .. .|..+.+.
T Consensus 199 ~~~~----~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~ 235 (239)
T TIGR01831 199 KTVP----MNRMGQPAEVASLAGFLMSDGASYVTRQVISVN 235 (239)
T ss_pred hcCC----CCCCCCHHHHHHHHHHHcCchhcCccCCEEEec
Confidence 0010 012557899999999998865 22 34455554
No 222
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0013 Score=53.53 Aligned_cols=151 Identities=18% Similarity=0.160 Sum_probs=88.3
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHh--CCccE
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEV--GNIKR 57 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~--g~vk~ 57 (258)
.+.++.+|++|++++.++++ ++|+|||+++... +.+..+++.++... ++-.+
T Consensus 59 ~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~ 138 (264)
T PRK07576 59 EGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGAS 138 (264)
T ss_pred ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCE
Confidence 35678999999998888765 4699999986311 33445666665431 10147
Q ss_pred EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccc-cCcCCCCCCCCCCCCCCceEe
Q 025054 58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFG-FFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 128 (258)
+|. |+...... .+....|..+|..++.+.+. .++.++.++||.+.+ ....... .. ......
T Consensus 139 iv~iss~~~~~~----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~-~~----~~~~~~- 208 (264)
T PRK07576 139 IIQISAPQAFVP----MPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLA-PS----PELQAA- 208 (264)
T ss_pred EEEECChhhccC----CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcc-cC----HHHHHH-
Confidence 776 66433221 11234566799999887764 478999999998764 2111110 00 000000
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.........+...+|+|+++..++.++. ..|..+.+.|
T Consensus 209 ~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~g 248 (264)
T PRK07576 209 VAQSVPLKRNGTKQDIANAALFLASDMASYITGVVLPVDG 248 (264)
T ss_pred HHhcCCCCCCCCHHHHHHHHHHHcChhhcCccCCEEEECC
Confidence 0000001125678999999999998652 2466777765
No 223
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=97.48 E-value=0.00069 Score=50.99 Aligned_cols=96 Identities=18% Similarity=0.254 Sum_probs=67.8
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhCCccEEE
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVGNIKRFF 59 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~vk~~v 59 (258)
.+.++.+|+++.+++.++++ ..|.|||+++... +....++++++++.+ .++++
T Consensus 54 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii 132 (180)
T smart00822 54 EVTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFV 132 (180)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEE
Confidence 35678899999888877655 3599999997321 455678888887777 78888
Q ss_pred c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh---CCCCeEEEecCccc
Q 025054 60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA---EGIPHTYVSCNCSF 106 (258)
Q Consensus 60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---~~~~~t~lr~~~~~ 106 (258)
. |+....... .....|..+|..++.+++. .+++.+.+.+|.+-
T Consensus 133 ~~ss~~~~~~~----~~~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 133 LFSSVAGVLGN----PGQANYAAANAFLDALAAHRRARGLPATSINWGAWA 179 (180)
T ss_pred EEccHHHhcCC----CCchhhHHHHHHHHHHHHHHHhcCCceEEEeecccc
Confidence 7 665443221 1234566789988887653 68899999988653
No 224
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.0014 Score=53.33 Aligned_cols=156 Identities=15% Similarity=0.126 Sum_probs=92.9
Q ss_pred ceeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054 6 NCLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK 56 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk 56 (258)
++.++.+|++|++++.++++ +.|++||+++... +...+.++...++.+ ..
T Consensus 59 ~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g 137 (263)
T PRK08339 59 DVSYIVADLTKREDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FG 137 (263)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CC
Confidence 47789999999998888775 5799999987421 223466666666666 67
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCC-CCC-CCCC-CCc
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQ-PGA-TAPP-REN 125 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~-~~~-~~~~-~~~ 125 (258)
++|. |+....... +....|..+|+.++.+.+. .|+.+..|.||.+...+...... ... .... ...
T Consensus 138 ~Ii~isS~~~~~~~----~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~ 213 (263)
T PRK08339 138 RIIYSTSVAIKEPI----PNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEA 213 (263)
T ss_pred EEEEEcCccccCCC----CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHH
Confidence 8887 665433211 1233456689998876653 57999999999887654321100 000 0000 000
Q ss_pred eEeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
...........-+...+|+|.++..++.+. . -.|+.+.+.|
T Consensus 214 ~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdg 256 (263)
T PRK08339 214 LQEYAKPIPLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDG 256 (263)
T ss_pred HHHHhccCCcccCcCHHHHHHHHHHHhcchhcCccCceEEECC
Confidence 000000000012567899999999998764 2 2456666654
No 225
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.46 E-value=0.0016 Score=57.32 Aligned_cols=149 Identities=12% Similarity=0.068 Sum_probs=88.4
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhC---Ccc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVG---NIK 56 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g---~vk 56 (258)
+..++.+|++|.+++.++++ +.|+|||+++... +.+..++.+++.... +-.
T Consensus 257 ~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g 336 (450)
T PRK08261 257 GGTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGG 336 (450)
T ss_pred CCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCC
Confidence 45678899999988777665 5799999998431 345566667765533 025
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
+||. |+....... +....|..+|..++.+++. .++..+.+.||.+-..+...+.. . .......+.-
T Consensus 337 ~iv~~SS~~~~~g~----~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~-~-~~~~~~~~~~ 410 (450)
T PRK08261 337 RIVGVSSISGIAGN----RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPF-A-TREAGRRMNS 410 (450)
T ss_pred EEEEECChhhcCCC----CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccch-h-HHHHHhhcCC
Confidence 7776 654332211 1245677799977666543 58999999999765432211100 0 0000001100
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
. ......+|+|+++..++.... -.|+.+.++|
T Consensus 411 l------~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g 444 (450)
T PRK08261 411 L------QQGGLPVDVAETIAWLASPASGGVTGNVVRVCG 444 (450)
T ss_pred c------CCCCCHHHHHHHHHHHhChhhcCCCCCEEEECC
Confidence 1 112356799999999887542 2477888875
No 226
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.45 E-value=0.0023 Score=51.07 Aligned_cols=148 Identities=11% Similarity=0.044 Sum_probs=85.0
Q ss_pred CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhch----HHHHHHHHHhC-
Q 025054 5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVG- 53 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g- 53 (258)
.|+.++.+|+.|.+++.++++ +.|++||+++... +... +.++...++.+
T Consensus 46 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~ 125 (236)
T PRK06483 46 AGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH 125 (236)
T ss_pred cCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC
Confidence 457788999999888776554 4799999987421 1112 23333333322
Q ss_pred CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
+..++|+ |+....... +....|..+|+.++.+.+. .++.+..|+||++...... ... .. ..
T Consensus 126 ~~g~iv~~ss~~~~~~~----~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~---~~~---~~-~~- 193 (236)
T PRK06483 126 AASDIIHITDYVVEKGS----DKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD---DAA---YR-QK- 193 (236)
T ss_pred CCceEEEEcchhhccCC----CCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC---CHH---HH-HH-
Confidence 0246777 654332211 1234677799999988764 3589999999987432110 000 00 00
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRP 166 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g 166 (258)
........+ +...+|+++++..++...--.|+.+.+.|
T Consensus 194 -~~~~~~~~~-~~~~~~va~~~~~l~~~~~~~G~~i~vdg 231 (236)
T PRK06483 194 -ALAKSLLKI-EPGEEEIIDLVDYLLTSCYVTGRSLPVDG 231 (236)
T ss_pred -HhccCcccc-CCCHHHHHHHHHHHhcCCCcCCcEEEeCc
Confidence 000000111 34689999999999874433566777764
No 227
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.44 E-value=0.0053 Score=49.30 Aligned_cols=129 Identities=12% Similarity=0.057 Sum_probs=78.0
Q ss_pred ceeEEeccCC--CHHHHHHh-------hCCCcEEEEccCccc--------------------hhchHHHHHHH----HHh
Q 025054 6 NCLIAQGDLH--DHESLVKA-------IKPVDVVISAVGRTE--------------------VEDQFKLIAAI----KEV 52 (258)
Q Consensus 6 gv~~~~~D~~--d~~~l~~a-------l~g~d~Vi~~~~~~~--------------------~~~~~~li~aa----~~~ 52 (258)
.+.++.+|++ +.+++.++ +...|+|||+++... +.+..++++++ ++.
T Consensus 63 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~ 142 (247)
T PRK08945 63 QPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS 142 (247)
T ss_pred CceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC
Confidence 3567778886 45444433 346899999987421 23333444444 456
Q ss_pred CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054 53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE 124 (258)
Q Consensus 53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~ 124 (258)
+ .++||+ |+....... +....|..+|+.++.+++. .++.++.++||.+-....... +
T Consensus 143 ~-~~~iv~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~--~-------- 207 (247)
T PRK08945 143 P-AASLVFTSSSVGRQGR----ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASA--F-------- 207 (247)
T ss_pred C-CCEEEEEccHhhcCCC----CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhh--c--------
Confidence 6 788887 665433221 1234677799998887653 478899999987654321110 0
Q ss_pred ceEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
.. .....+...+|++..+..++.++
T Consensus 208 ----~~--~~~~~~~~~~~~~~~~~~~~~~~ 232 (247)
T PRK08945 208 ----PG--EDPQKLKTPEDIMPLYLYLMGDD 232 (247)
T ss_pred ----Cc--ccccCCCCHHHHHHHHHHHhCcc
Confidence 00 00113568899999999988765
No 228
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.43 E-value=0.008 Score=50.11 Aligned_cols=145 Identities=13% Similarity=0.110 Sum_probs=83.3
Q ss_pred ceeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-------------------hhchHHHHHHHHH----h----
Q 025054 6 NCLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-------------------VEDQFKLIAAIKE----V---- 52 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~----~---- 52 (258)
.+.++.+|+.|.+++.++++ ++|+|||+++... +.+..++++++.. .
T Consensus 63 ~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~ 142 (306)
T PRK07792 63 KAVAVAGDISQRATADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAA 142 (306)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccc
Confidence 36788999999988877664 5899999997521 2344455555432 1
Q ss_pred C-C-ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCC
Q 025054 53 G-N-IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPP 122 (258)
Q Consensus 53 g-~-vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~ 122 (258)
+ . -.++|. |+....... +....|..+|+.++.+.+. .|+.+..|.|+. ...+.... +. ...
T Consensus 143 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~--~~--~~~ 213 (306)
T PRK07792 143 GGPVYGRIVNTSSEAGLVGP----VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADV--FG--DAP 213 (306)
T ss_pred CCCCCcEEEEECCcccccCC----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhh--cc--ccc
Confidence 0 0 136776 554322211 1234577799999877643 579999999973 21111110 00 000
Q ss_pred CCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 123 RENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 123 ~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
. .. .......+.+|++.+++.++.... ..|+.+.+.|
T Consensus 214 --~--~~---~~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~g 252 (306)
T PRK07792 214 --D--VE---AGGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYG 252 (306)
T ss_pred --h--hh---hhccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcC
Confidence 0 00 011234578999999998887642 3466666654
No 229
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.40 E-value=0.0035 Score=50.84 Aligned_cols=147 Identities=12% Similarity=0.099 Sum_probs=86.5
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-------c----------------hhc----hHHHHHHHHHh
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-------E----------------VED----QFKLIAAIKEV 52 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-------~----------------~~~----~~~li~aa~~~ 52 (258)
+.++.+|++|++++.++++ +.|++||+++.. . +.. .+.++...++.
T Consensus 61 ~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~ 140 (258)
T PRK07370 61 SLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG 140 (258)
T ss_pred ceEeecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC
Confidence 5678899999998887664 579999998742 1 112 23333333332
Q ss_pred CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054 53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE 124 (258)
Q Consensus 53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~ 124 (258)
.++|. |+...... .+....|..+|+.++.+.+. .|+.+..|.||++...+...+... . .
T Consensus 141 ---g~Iv~isS~~~~~~----~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~--~--~-- 207 (258)
T PRK07370 141 ---GSIVTLTYLGGVRA----IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGI--L--D-- 207 (258)
T ss_pred ---CeEEEEeccccccC----CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccc--h--h--
Confidence 36776 66543321 12234577799999877654 579999999998876543211000 0 0
Q ss_pred ceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
...-........-+...+|++.++..++.++. -.|+.+.+-|
T Consensus 208 ~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdg 251 (258)
T PRK07370 208 MIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDA 251 (258)
T ss_pred hhhhhhhcCCcCcCCCHHHHHHHHHHHhChhhccccCcEEEECC
Confidence 00000000000125678999999999987652 2366666654
No 230
>PRK06924 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.00059 Score=54.93 Aligned_cols=151 Identities=11% Similarity=0.014 Sum_probs=85.3
Q ss_pred ceeEEeccCCCHHHHHHhhCCC---------c--EEEEccCccc--------------------h----hchHHHHHHHH
Q 025054 6 NCLIAQGDLHDHESLVKAIKPV---------D--VVISAVGRTE--------------------V----EDQFKLIAAIK 50 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~---------d--~Vi~~~~~~~--------------------~----~~~~~li~aa~ 50 (258)
+++++.+|++|.+++.++++.+ + .++++++... + ...+.++..++
T Consensus 49 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 128 (251)
T PRK06924 49 NLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTK 128 (251)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHh
Confidence 5788999999999988877532 1 5677665310 1 12345555555
Q ss_pred HhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh---------CCCCeEEEecCcccccCcCCCCCCCCCC
Q 025054 51 EVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA---------EGIPHTYVSCNCSFGFFLPTMAQPGATA 120 (258)
Q Consensus 51 ~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~t~lr~~~~~~~~~~~~~~~~~~~ 120 (258)
+.+..+++|. |+...... .++...|..+|+.++.+.+. .++.+..|+||++-.++...........
T Consensus 129 ~~~~~~~iv~~sS~~~~~~----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~ 204 (251)
T PRK06924 129 DWKVDKRVINISSGAAKNP----YFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKED 204 (251)
T ss_pred ccCCCceEEEecchhhcCC----CCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCccc
Confidence 5331457777 65433211 22345677799999887652 3688999999988765432110000000
Q ss_pred CC-CCc-eEeccCCCceeeeeccchHHHHHHHHhcCCC-CCCceEEE
Q 025054 121 PP-REN-ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYL 164 (258)
Q Consensus 121 ~~-~~~-~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l 164 (258)
.. ... ...... -.+.+.+|+|+.+..++.++. ..|+.+.+
T Consensus 205 ~~~~~~~~~~~~~----~~~~~~~dva~~~~~l~~~~~~~~G~~~~v 247 (251)
T PRK06924 205 FTNLDRFITLKEE----GKLLSPEYVAKALRNLLETEDFPNGEVIDI 247 (251)
T ss_pred chHHHHHHHHhhc----CCcCCHHHHHHHHHHHHhcccCCCCCEeeh
Confidence 00 000 000111 126789999999999998743 23444444
No 231
>PRK06484 short chain dehydrogenase; Validated
Probab=97.39 E-value=0.0019 Score=57.89 Aligned_cols=150 Identities=17% Similarity=0.159 Sum_probs=90.7
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHHh--CCccE
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKEV--GNIKR 57 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~--g~vk~ 57 (258)
+..+.+|++|++++.++++ ..|++||+++... +.+...+++++... + -.+
T Consensus 317 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~g~ 395 (520)
T PRK06484 317 HLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ-GGV 395 (520)
T ss_pred eeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc-CCE
Confidence 5568999999998887765 4799999987421 23344555555432 2 247
Q ss_pred EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054 58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY 129 (258)
Q Consensus 58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (258)
+|. |+...... .++...|..+|+.++.+.+. .|+.++.|+||++...+......... .....+ .
T Consensus 396 iv~isS~~~~~~----~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~--~~~~~~--~ 467 (520)
T PRK06484 396 IVNLGSIASLLA----LPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGR--ADFDSI--R 467 (520)
T ss_pred EEEECchhhcCC----CCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccH--HHHHHH--H
Confidence 777 66544322 12345677799999877654 47999999999887654322110000 000000 0
Q ss_pred cCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 130 GDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 130 g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.......+...+|+|++++.++.+.. ..|+.+.+.|
T Consensus 468 -~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdg 505 (520)
T PRK06484 468 -RRIPLGRLGDPEEVAEAIAFLASPAASYVNGATLTVDG 505 (520)
T ss_pred -hcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 00000125688999999999987642 3466777764
No 232
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.38 E-value=0.0021 Score=51.95 Aligned_cols=151 Identities=12% Similarity=0.115 Sum_probs=86.6
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-------c----------------hhchHHHHHHHHHhC-C
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-------E----------------VEDQFKLIAAIKEVG-N 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-------~----------------~~~~~~li~aa~~~g-~ 54 (258)
.+..+.+|++|++++.++++ ..|++||.++.. . +.....++.++...- +
T Consensus 56 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~ 135 (252)
T PRK06079 56 EDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP 135 (252)
T ss_pred ceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc
Confidence 46788999999988877654 479999998742 0 112233333333210 0
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
-.++|. |+.+..... +....|..+|+.++.+.+. .|+.+..|.||.+-..+...+... . ...
T Consensus 136 ~g~Iv~iss~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~-----~-~~~ 205 (252)
T PRK06079 136 GASIVTLTYFGSERAI----PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGH-----K-DLL 205 (252)
T ss_pred CceEEEEeccCccccC----CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCCh-----H-HHH
Confidence 135665 655432211 1234566799999877753 579999999998876543221100 0 000
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
...........+...+|+|+++..++.+. . -.|+.+.+.|
T Consensus 206 ~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdg 247 (252)
T PRK06079 206 KESDSRTVDGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDK 247 (252)
T ss_pred HHHHhcCcccCCCCHHHHHHHHHHHhCcccccccccEEEeCC
Confidence 00000000012678899999999998764 2 2466666654
No 233
>PRK07023 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.001 Score=53.25 Aligned_cols=99 Identities=14% Similarity=0.063 Sum_probs=67.0
Q ss_pred ceeEEeccCCCHHHHHHhhC-----------CCcEEEEccCccc--------------------hhc----hHHHHHHHH
Q 025054 6 NCLIAQGDLHDHESLVKAIK-----------PVDVVISAVGRTE--------------------VED----QFKLIAAIK 50 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-----------g~d~Vi~~~~~~~--------------------~~~----~~~li~aa~ 50 (258)
.+.++.+|+.|.+++.++++ +.|++||+++... +.+ .+.++.+++
T Consensus 46 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 125 (243)
T PRK07023 46 RLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAAS 125 (243)
T ss_pred eEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhh
Confidence 47788999999998887442 3688999986421 122 345555555
Q ss_pred HhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccC
Q 025054 51 EVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFF 109 (258)
Q Consensus 51 ~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~ 109 (258)
+.+ .+++|. |+...... .++...|..+|..++.+++. .++.+..|+||++-..+
T Consensus 126 ~~~-~~~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~ 186 (243)
T PRK07023 126 DAA-ERRILHISSGAARNA----YAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGM 186 (243)
T ss_pred ccC-CCEEEEEeChhhcCC----CCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHH
Confidence 555 678888 76543321 12344577799999988863 47999999999876543
No 234
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=97.36 E-value=0.0054 Score=48.79 Aligned_cols=142 Identities=15% Similarity=0.070 Sum_probs=85.0
Q ss_pred CceeEEeccCCCHHHHHHh---hCCCcEEEEccCccc-----------------------------hhchHHHHHHHHHh
Q 025054 5 INCLIAQGDLHDHESLVKA---IKPVDVVISAVGRTE-----------------------------VEDQFKLIAAIKEV 52 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~a---l~g~d~Vi~~~~~~~-----------------------------~~~~~~li~aa~~~ 52 (258)
..+.++++|++|.+++.+. +.+.|+|||+++... ....+.++..+++.
T Consensus 43 ~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~ 122 (235)
T PRK09009 43 DNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS 122 (235)
T ss_pred CceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc
Confidence 3577899999998876654 557899999998531 11223344444444
Q ss_pred CCccEEEc-CC-CCCCCCCCCCCCCCccchhhHHHHHHHHHh---------CCCCeEEEecCcccccCcCCCCCCCCCCC
Q 025054 53 GNIKRFFP-TE-YGSNVDAGHPIEPAKSGYARKAKIRRAIEA---------EGIPHTYVSCNCSFGFFLPTMAQPGATAP 121 (258)
Q Consensus 53 g~vk~~v~-S~-~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~ 121 (258)
+ ..+++. |+ .+..... +.++...|..+|+.++.+.+. .++.+..+.||.+...+.....
T Consensus 123 ~-~~~i~~iss~~~~~~~~--~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~------- 192 (235)
T PRK09009 123 E-SAKFAVISAKVGSISDN--RLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ------- 192 (235)
T ss_pred C-CceEEEEeecccccccC--CCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh-------
Confidence 4 456665 54 3321111 112234567799999887753 2677888899887665432110
Q ss_pred CCCceEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEc
Q 025054 122 PRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLR 165 (258)
Q Consensus 122 ~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~ 165 (258)
. . .+ ...+.+.+|+|+.+..++.... ..|..+.+-
T Consensus 193 -~-~--~~-----~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~ 229 (235)
T PRK09009 193 -Q-N--VP-----KGKLFTPEYVAQCLLGIIANATPAQSGSFLAYD 229 (235)
T ss_pred -h-c--cc-----cCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeC
Confidence 0 0 01 1125688999999999998752 245555554
No 235
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.35 E-value=0.002 Score=54.13 Aligned_cols=102 Identities=19% Similarity=0.210 Sum_probs=62.8
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHH----HHhCC
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAI----KEVGN 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa----~~~g~ 54 (258)
.+.++.+|+.|.+++.++++ +.|+|||+++... +.+...+++++ ++.+.
T Consensus 56 ~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 135 (322)
T PRK07453 56 SYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPA 135 (322)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCC
Confidence 47888999999998888775 3899999987310 22233444443 34431
Q ss_pred -ccEEEc-CCCCCCCC------------C-------------------CCCCCCCccchhhHHHHHHHH----Hh----C
Q 025054 55 -IKRFFP-TEYGSNVD------------A-------------------GHPIEPAKSGYARKAKIRRAI----EA----E 93 (258)
Q Consensus 55 -vk~~v~-S~~~~~~~------------~-------------------~~~~~~~~~~~~~k~~~e~~l----~~----~ 93 (258)
..|+|. |+...... . ..+..+...|..+|...+.+. ++ .
T Consensus 136 ~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~ 215 (322)
T PRK07453 136 PDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHEST 215 (322)
T ss_pred CCceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccC
Confidence 358887 65322110 0 011223456777998764433 32 3
Q ss_pred CCCeEEEecCcccc
Q 025054 94 GIPHTYVSCNCSFG 107 (258)
Q Consensus 94 ~~~~t~lr~~~~~~ 107 (258)
++.++.++||++++
T Consensus 216 gi~v~~v~PG~v~~ 229 (322)
T PRK07453 216 GITFSSLYPGCVAD 229 (322)
T ss_pred CeEEEEecCCcccC
Confidence 79999999999975
No 236
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0024 Score=51.87 Aligned_cols=156 Identities=10% Similarity=0.078 Sum_probs=88.4
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v 55 (258)
.+..+.+|++|.+++.++++ ++|++||+++... +...+.++...++.+ .
T Consensus 60 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~ 138 (265)
T PRK07062 60 RLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-A 138 (265)
T ss_pred eEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-C
Confidence 46678999999988876554 5799999997421 122345555556555 5
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCC-CCCCCCCCCCCCce
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPT-MAQPGATAPPRENI 126 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~-~~~~~~~~~~~~~~ 126 (258)
.++|. |+....... +....|..+|+.++.+.+. .|+.++.|+||++....... +.............
T Consensus 139 g~iv~isS~~~~~~~----~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~ 214 (265)
T PRK07062 139 ASIVCVNSLLALQPE----PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAW 214 (265)
T ss_pred cEEEEeccccccCCC----CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHH
Confidence 67887 665432211 1234566688887765542 58999999999887654321 00000000000000
Q ss_pred --Eec-cCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 127 --LFY-GDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 127 --~~~-g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
.+. -......-+...+|+|.+++.++.+. . -.|+.+.+-|
T Consensus 215 ~~~~~~~~~~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdg 259 (265)
T PRK07062 215 TAALARKKGIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSG 259 (265)
T ss_pred HHHHhhcCCCCcCCCCCHHHHHHHHHHHhCchhcccccceEEEcC
Confidence 000 00000012567899999999988754 2 2466666654
No 237
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.0052 Score=49.53 Aligned_cols=152 Identities=13% Similarity=0.031 Sum_probs=86.7
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHH----HhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~v 55 (258)
.+.++.+|++|++++.++++ +.|+|||+++... +.+..++++++. +.+.-
T Consensus 51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 130 (252)
T PRK07677 51 QVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIK 130 (252)
T ss_pred cEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCC
Confidence 47789999999988877664 5799999987321 233445666663 22212
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh--------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA--------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~--------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
.++|. |+....... +...+|..+|+.++.+.+. .|++++.|+||.+....... ... .......
T Consensus 131 g~ii~isS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~--~~~-~~~~~~~- 202 (252)
T PRK07677 131 GNIINMVATYAWDAG----PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGAD--KLW-ESEEAAK- 202 (252)
T ss_pred EEEEEEcChhhccCC----CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccc--ccc-CCHHHHH-
Confidence 46776 544322111 1234677799998876652 47999999999887422110 000 0000000
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.+...-. ..-+...+|+++++..++..+. -.|..+.+.|
T Consensus 203 ~~~~~~~-~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~g 243 (252)
T PRK07677 203 RTIQSVP-LGRLGTPEEIAGLAYFLLSDEAAYINGTCITMDG 243 (252)
T ss_pred HHhccCC-CCCCCCHHHHHHHHHHHcCccccccCCCEEEECC
Confidence 0000000 0126688999999988887642 2455666654
No 238
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0025 Score=53.06 Aligned_cols=104 Identities=14% Similarity=0.034 Sum_probs=66.9
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hhchHHHHHHHHHhCCccE
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VEDQFKLIAAIKEVGNIKR 57 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~~g~vk~ 57 (258)
.+.++.+|+.|.+++.++++ +.|+|||+++... ....+.++..+++.+ ..+
T Consensus 68 ~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~ 146 (306)
T PRK06197 68 DVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSR 146 (306)
T ss_pred ceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCE
Confidence 47788999999998877654 5799999997421 122566777777776 678
Q ss_pred EEc-CCCCCCC-C-----C---CCCCCCCccchhhHHHHHHHHHh-------CCCCeEEE--ecCcccccCc
Q 025054 58 FFP-TEYGSNV-D-----A---GHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYV--SCNCSFGFFL 110 (258)
Q Consensus 58 ~v~-S~~~~~~-~-----~---~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~l--r~~~~~~~~~ 110 (258)
+|. |+.+... . . .....+...|..+|+..+.+.+. .+++.+++ .||++...+.
T Consensus 147 iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~ 218 (306)
T PRK06197 147 VVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELA 218 (306)
T ss_pred EEEECCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence 887 6643211 0 0 01122334577799988876653 35655544 6988766543
No 239
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0014 Score=54.32 Aligned_cols=138 Identities=14% Similarity=0.090 Sum_probs=81.7
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHh---CCccE
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEV---GNIKR 57 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~---g~vk~ 57 (258)
+..+.+|++|.+++.++++ +.|+|||+++... +.+..++++++... . ..+
T Consensus 59 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~ 137 (296)
T PRK05872 59 VLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGY 137 (296)
T ss_pred EEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCE
Confidence 3445699999988877654 5799999998521 23334455554321 2 247
Q ss_pred EEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce-Ee
Q 025054 58 FFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI-LF 128 (258)
Q Consensus 58 ~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 128 (258)
+|. |+....... +....|..+|+.++.+.+. .++.++++.||++...+....... . ... .+
T Consensus 138 iv~isS~~~~~~~----~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~----~--~~~~~~ 207 (296)
T PRK05872 138 VLQVSSLAAFAAA----PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD----L--PAFREL 207 (296)
T ss_pred EEEEeCHhhcCCC----CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc----c--hhHHHH
Confidence 877 665433221 1244677799999877653 589999999998876543221000 0 000 00
Q ss_pred ccCCC-ceeeeeccchHHHHHHHHhcCC
Q 025054 129 YGDGQ-PKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 129 ~g~g~-~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
...-. ....+.+.+|+|+++..++...
T Consensus 208 ~~~~~~p~~~~~~~~~va~~i~~~~~~~ 235 (296)
T PRK05872 208 RARLPWPLRRTTSVEKCAAAFVDGIERR 235 (296)
T ss_pred HhhCCCcccCCCCHHHHHHHHHHHHhcC
Confidence 00000 0113568899999999988764
No 240
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.23 E-value=0.011 Score=47.89 Aligned_cols=154 Identities=12% Similarity=0.017 Sum_probs=86.8
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHH----
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIK---- 50 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~---- 50 (258)
.+.++.+|+.|.+++.++++ ..|++||+++... +.....+++++.
T Consensus 53 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 132 (263)
T PRK06200 53 HVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALK 132 (263)
T ss_pred cceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHH
Confidence 36788999999988877764 5799999998421 112233444443
Q ss_pred HhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCC--C
Q 025054 51 EVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATA--P 121 (258)
Q Consensus 51 ~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~--~ 121 (258)
+.+ .++|. |+....... +....|..+|+.++.+.+. .++.+..|.||++...+..... ..... .
T Consensus 133 ~~~--g~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~-~~~~~~~~ 205 (263)
T PRK06200 133 ASG--GSMIFTLSNSSFYPG----GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPAS-LGQGETSI 205 (263)
T ss_pred hcC--CEEEEECChhhcCCC----CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccc-cCCCCccc
Confidence 222 35666 554332211 1234577799999887764 3589999999988765432110 00000 0
Q ss_pred C--CCceEeccCCCceeeeeccchHHHHHHHHhcCC-C--CCCceEEEcC
Q 025054 122 P--RENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R--TLNKTLYLRP 166 (258)
Q Consensus 122 ~--~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~--~~~~~~~l~g 166 (258)
. ..............-+...+|+|.++..++.++ . -.|+.+.+.|
T Consensus 206 ~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdg 255 (263)
T PRK06200 206 SDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRRNSRALTGVVINADG 255 (263)
T ss_pred ccccchhHHhhcCCCCCCCCCHHHHhhhhhheecccccCcccceEEEEcC
Confidence 0 000000000000112568899999999998755 2 2466666654
No 241
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.21 E-value=0.0041 Score=50.33 Aligned_cols=143 Identities=8% Similarity=-0.016 Sum_probs=86.2
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK 56 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk 56 (258)
+.++.+|++|.+++.++++ ..|++||.++... +...+.++..+++.+ -.
T Consensus 70 ~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g 148 (256)
T PRK12859 70 VSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GG 148 (256)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-Ce
Confidence 5678999999998887764 3699999987421 122344455555444 45
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
++|. |+...... .++...|..+|+.++.+.+. .++.++.|+||.+-..+...- . .......
T Consensus 149 ~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~----~---~~~~~~~ 217 (256)
T PRK12859 149 RIINMTSGQFQGP----MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEE----I---KQGLLPM 217 (256)
T ss_pred EEEEEcccccCCC----CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHH----H---HHHHHhc
Confidence 8887 65443221 12345677799999876543 579999999998765432110 0 0000000
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCC-CC-CCceEEEc
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDP-RT-LNKTLYLR 165 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~-~~~~~~l~ 165 (258)
. + ...+...+|+|+++..++... .. .|+.+.+-
T Consensus 218 ~--~--~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d 252 (256)
T PRK12859 218 F--P--FGRIGEPKDAARLIKFLASEEAEWITGQIIHSE 252 (256)
T ss_pred C--C--CCCCcCHHHHHHHHHHHhCccccCccCcEEEeC
Confidence 0 0 012457899999999988764 22 35555554
No 242
>PRK05599 hypothetical protein; Provisional
Probab=97.19 E-value=0.019 Score=46.21 Aligned_cols=135 Identities=12% Similarity=0.092 Sum_probs=80.8
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhch----HHHHHHHHHhCCcc
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVGNIK 56 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g~vk 56 (258)
+.++.+|+.|.+++.++++ +.|++||+++... +... +.++...++.++-.
T Consensus 51 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g 130 (246)
T PRK05599 51 VHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPA 130 (246)
T ss_pred eEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCC
Confidence 6788999999988877653 5799999887531 0111 12223333332114
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
++|. |+....... +....|..+|+.++.+.+. .++.++.+.||.+...+.... . .
T Consensus 131 ~Iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~--------~--~--- 193 (246)
T PRK05599 131 AIVAFSSIAGWRAR----RANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM--------K--P--- 193 (246)
T ss_pred EEEEEeccccccCC----cCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC--------C--C---
Confidence 6776 554332211 1234566799998766643 578899999998876542210 0 0
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEc
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLR 165 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~ 165 (258)
. +. ....+|+|+.++.++..++ ..+.+.+.
T Consensus 194 -~----~~-~~~pe~~a~~~~~~~~~~~-~~~~~~~~ 223 (246)
T PRK05599 194 -A----PM-SVYPRDVAAAVVSAITSSK-RSTTLWIP 223 (246)
T ss_pred -C----CC-CCCHHHHHHHHHHHHhcCC-CCceEEeC
Confidence 0 00 2478999999999998763 23445554
No 243
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.17 E-value=0.0062 Score=49.37 Aligned_cols=150 Identities=10% Similarity=0.062 Sum_probs=85.4
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-------c----------------hhchHHHHHHHHHhC-C
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-------E----------------VEDQFKLIAAIKEVG-N 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-------~----------------~~~~~~li~aa~~~g-~ 54 (258)
.+..+.+|++|++++.++++ ..|++||+++.. . +.....+++++...- .
T Consensus 60 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 139 (257)
T PRK08594 60 ESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE 139 (257)
T ss_pred ceEEEecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc
Confidence 46788999999998877664 479999998632 0 011122333333210 0
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
-.++|. |+....... +....|..+|+.++.+.+. .|+.+..|.||.+...+........ .. ...
T Consensus 140 ~g~Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~--~~-~~~- 211 (257)
T PRK08594 140 GGSIVTLTYLGGERVV----QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFN--SI-LKE- 211 (257)
T ss_pred CceEEEEcccCCccCC----CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcccc--HH-HHH-
Confidence 136776 655433211 1234577799999877653 5799999999988765322110000 00 000
Q ss_pred EeccCCCce-eeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 127 LFYGDGQPK-AIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 127 ~~~g~g~~~-~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
+.. ..+ ..+...+|+|+++..++.+.. ..|..+.+.|
T Consensus 212 -~~~--~~p~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dg 251 (257)
T PRK08594 212 -IEE--RAPLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDS 251 (257)
T ss_pred -Hhh--cCCccccCCHHHHHHHHHHHcCcccccccceEEEECC
Confidence 000 011 125688999999999987642 2456666654
No 244
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.015 Score=46.31 Aligned_cols=128 Identities=11% Similarity=-0.061 Sum_probs=75.9
Q ss_pred eeEEeccCCC--HHHHHHh-------h-CCCcEEEEccCccc--------------------hhchHHHHHHH----HHh
Q 025054 7 CLIAQGDLHD--HESLVKA-------I-KPVDVVISAVGRTE--------------------VEDQFKLIAAI----KEV 52 (258)
Q Consensus 7 v~~~~~D~~d--~~~l~~a-------l-~g~d~Vi~~~~~~~--------------------~~~~~~li~aa----~~~ 52 (258)
+..+.+|+.| .+++.++ + ...|.|||+++... +.+..++++++ ++.
T Consensus 58 ~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~ 137 (239)
T PRK08703 58 PFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQS 137 (239)
T ss_pred cceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhC
Confidence 4567788864 3333333 3 35799999998420 22223344444 444
Q ss_pred CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------C-CCCeEEEecCcccccCcCCCCCCCCCCCCC
Q 025054 53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------E-GIPHTYVSCNCSFGFFLPTMAQPGATAPPR 123 (258)
Q Consensus 53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~-~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~ 123 (258)
+ -.+++. |+...... .+....|..+|+.++.+.+. . ++.++.|+||.+.+...... .
T Consensus 138 ~-~~~iv~~ss~~~~~~----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~-~-------- 203 (239)
T PRK08703 138 P-DASVIFVGESHGETP----KAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS-H-------- 203 (239)
T ss_pred C-CCEEEEEeccccccC----CCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc-C--------
Confidence 4 457776 55332211 11234577799999887653 2 58899999999887643211 0
Q ss_pred CceEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
++ .....+...+|++..+..++...
T Consensus 204 -----~~--~~~~~~~~~~~~~~~~~~~~~~~ 228 (239)
T PRK08703 204 -----PG--EAKSERKSYGDVLPAFVWWASAE 228 (239)
T ss_pred -----CC--CCccccCCHHHHHHHHHHHhCcc
Confidence 11 11123568999999999998753
No 245
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.012 Score=48.24 Aligned_cols=153 Identities=13% Similarity=0.121 Sum_probs=86.1
Q ss_pred eeEEeccCCCHHHHHHhhC------CCcEEEEccCccc------------hhchHHHHHHHHH----hCCccEEEc-CCC
Q 025054 7 CLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE------------VEDQFKLIAAIKE----VGNIKRFFP-TEY 63 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~------------~~~~~~li~aa~~----~g~vk~~v~-S~~ 63 (258)
+.++.+|++|.+++.++++ +.|++||+++... +.+..++++++.. .| . .++. |..
T Consensus 51 ~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g-~-iv~isS~~ 128 (275)
T PRK06940 51 VSTQEVDVSSRESVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGG-A-GVVIASQS 128 (275)
T ss_pred EEEEEeecCCHHHHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCC-C-EEEEEecc
Confidence 6778999999998887764 5899999998532 3344555555533 24 2 2333 443
Q ss_pred CCCCCCC------------------C----C--C-CCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcC
Q 025054 64 GSNVDAG------------------H----P--I-EPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLP 111 (258)
Q Consensus 64 ~~~~~~~------------------~----~--~-~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~ 111 (258)
+...... . . . .....|..+|+..+.+.+. .|+.+..|.||++...+..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~ 208 (275)
T PRK06940 129 GHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQ 208 (275)
T ss_pred cccCcccchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccch
Confidence 3221100 0 0 0 1124566799998766543 5799999999988765432
Q ss_pred CCCCCCCCCCCCCce-EeccCCCceeeeeccchHHHHHHHHhcCC-CC-CCceEEEcC
Q 025054 112 TMAQPGATAPPRENI-LFYGDGQPKAIFNKEEDIATYTIKAVDDP-RT-LNKTLYLRP 166 (258)
Q Consensus 112 ~~~~~~~~~~~~~~~-~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~-~~~~~~l~g 166 (258)
.... . ...... .+... ...--+...+|+|+++..++.+. .. .|..+.+-|
T Consensus 209 ~~~~-~---~~~~~~~~~~~~-~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdg 261 (275)
T PRK06940 209 DELN-G---PRGDGYRNMFAK-SPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDG 261 (275)
T ss_pred hhhc-C---CchHHHHHHhhh-CCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcC
Confidence 1000 0 000000 00000 00012678899999999988754 22 456666654
No 246
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0072 Score=47.82 Aligned_cols=101 Identities=14% Similarity=0.045 Sum_probs=63.3
Q ss_pred ceeEEeccCCCHHHHHHhhC-----CCcEEEEccCccc---------------------hhchHHHHHHHHH---hCCcc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-----PVDVVISAVGRTE---------------------VEDQFKLIAAIKE---VGNIK 56 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-----g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~---~g~vk 56 (258)
++.+..+|++|++++.++++ +.|+|||+++... +.....+++++.. .+ ..
T Consensus 46 ~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~ 124 (225)
T PRK08177 46 GVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QG 124 (225)
T ss_pred ccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CC
Confidence 46788899999988877665 5899999986421 2234455555532 22 24
Q ss_pred EEEc-CC-CCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccC
Q 025054 57 RFFP-TE-YGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFF 109 (258)
Q Consensus 57 ~~v~-S~-~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~ 109 (258)
+++. |+ ++..... +......|..+|+.++.+++. .++.++.++||++-..+
T Consensus 125 ~iv~~ss~~g~~~~~--~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~ 184 (225)
T PRK08177 125 VLAFMSSQLGSVELP--DGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM 184 (225)
T ss_pred EEEEEccCccccccC--CCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence 5665 44 3332111 111233566799999988764 46889999998775543
No 247
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.05 E-value=0.0089 Score=48.54 Aligned_cols=156 Identities=13% Similarity=0.034 Sum_probs=87.3
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc----------------------------hhchHHHHHHHH
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE----------------------------VEDQFKLIAAIK 50 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~----------------------------~~~~~~li~aa~ 50 (258)
++.++.+|+.|++++.++++ ..|+|||+++... +.....+++++.
T Consensus 50 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 129 (266)
T PRK06171 50 NYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVA 129 (266)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHH
Confidence 46788899999998887665 5799999987410 223345555554
Q ss_pred H----hCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccc-cCcC-CCCC-
Q 025054 51 E----VGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFG-FFLP-TMAQ- 115 (258)
Q Consensus 51 ~----~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~-~~~~-~~~~- 115 (258)
. .+ -.++|. |+....... +....|..+|+.++.+.+. .++.+..|+||.+.. .+.. ....
T Consensus 130 ~~~~~~~-~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~ 204 (266)
T PRK06171 130 RQMVKQH-DGVIVNMSSEAGLEGS----EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEA 204 (266)
T ss_pred HHHHhcC-CcEEEEEccccccCCC----CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhh
Confidence 3 33 356877 654432221 1234667799998877654 589999999998752 2211 0000
Q ss_pred CCCC-CCCCCc-e-Eecc-CCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054 116 PGAT-APPREN-I-LFYG-DGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP 166 (258)
Q Consensus 116 ~~~~-~~~~~~-~-~~~g-~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g 166 (258)
.... ...... . .+.. .......+...+|+|.++..++.+.. . .|..+.+.|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdg 261 (266)
T PRK06171 205 LAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAG 261 (266)
T ss_pred hccccCCCHHHHHhhhcccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecC
Confidence 0000 000000 0 0000 00000124678999999999887642 2 356666654
No 248
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.04 E-value=0.011 Score=47.96 Aligned_cols=149 Identities=13% Similarity=0.061 Sum_probs=85.2
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHH---h
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKE---V 52 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~---~ 52 (258)
...+.+|+.|++++.++++ +.|++||+++... +.....+.+++.. .
T Consensus 58 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~ 137 (261)
T PRK08690 58 ELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRG 137 (261)
T ss_pred ceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhh
Confidence 4568899999998887664 5899999987421 0111122222211 1
Q ss_pred CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054 53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE 124 (258)
Q Consensus 53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~ 124 (258)
+ -.++|. |+.+.... .+....|..+|+.++.+.+. .|+.+..|.||++-..+...+... ...
T Consensus 138 ~-~g~Iv~iss~~~~~~----~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~-----~~~ 207 (261)
T PRK08690 138 R-NSAIVALSYLGAVRA----IPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADF-----GKL 207 (261)
T ss_pred c-CcEEEEEcccccccC----CCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCch-----HHH
Confidence 1 135766 66554321 12234566799998876543 589999999998876532221100 000
Q ss_pred ceEeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
.-.+... ....-+...+|+|+++..++.+. . ..|+.+.+.|
T Consensus 208 ~~~~~~~-~p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdg 250 (261)
T PRK08690 208 LGHVAAH-NPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDG 250 (261)
T ss_pred HHHHhhc-CCCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcC
Confidence 0000000 00012678999999999999865 2 2466666654
No 249
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.03 E-value=0.0074 Score=49.46 Aligned_cols=146 Identities=11% Similarity=0.059 Sum_probs=83.7
Q ss_pred eEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-------c----------------hhc----hHHHHHHHHHhC
Q 025054 8 LIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-------E----------------VED----QFKLIAAIKEVG 53 (258)
Q Consensus 8 ~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-------~----------------~~~----~~~li~aa~~~g 53 (258)
..+.+|++|.+++.++++ ..|++||+++.. . +.+ .+.++...++.
T Consensus 58 ~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~- 136 (274)
T PRK08415 58 YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG- 136 (274)
T ss_pred eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-
Confidence 467899999998877654 579999999741 0 112 23333333322
Q ss_pred CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054 54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN 125 (258)
Q Consensus 54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~ 125 (258)
.++|. |+.+..... +....|..+|+.++.+.+. .|+.+..|.||++...+.......... .....
T Consensus 137 --g~Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~-~~~~~ 209 (274)
T PRK08415 137 --ASVLTLSYLGGVKYV----PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMI-LKWNE 209 (274)
T ss_pred --CcEEEEecCCCccCC----CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHH-hhhhh
Confidence 36776 665433211 1234566799998776653 579999999998865432111000000 00000
Q ss_pred eEeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
...+. .-+...+|+|.+++.++.+. . -.|+.+.+.|
T Consensus 210 ~~~pl-----~r~~~pedva~~v~fL~s~~~~~itG~~i~vdG 247 (274)
T PRK08415 210 INAPL-----KKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDA 247 (274)
T ss_pred hhCch-----hccCCHHHHHHHHHHHhhhhhhcccccEEEEcC
Confidence 00010 12567899999999998864 2 2466677764
No 250
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.02 E-value=0.018 Score=47.11 Aligned_cols=147 Identities=11% Similarity=0.088 Sum_probs=83.6
Q ss_pred eEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-------c----------------hhchHHHHHHHHHh--CCc
Q 025054 8 LIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-------E----------------VEDQFKLIAAIKEV--GNI 55 (258)
Q Consensus 8 ~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-------~----------------~~~~~~li~aa~~~--g~v 55 (258)
..+.+|++|.+++.++++ ..|++||+++.. . +.....++.++... . -
T Consensus 60 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-~ 138 (271)
T PRK06505 60 FVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-G 138 (271)
T ss_pred eEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-C
Confidence 467899999988877654 579999998742 1 11222233333210 1 1
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+...... .+....|..+|+.++.+.+. .|+.+..|.||.+...+...+... . ....
T Consensus 139 G~Iv~isS~~~~~~----~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~-----~-~~~~ 208 (271)
T PRK06505 139 GSMLTLTYGGSTRV----MPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDA-----R-AIFS 208 (271)
T ss_pred ceEEEEcCCCcccc----CCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcch-----H-HHHH
Confidence 36776 55433221 11234567799998876653 579999999998876542211000 0 0000
Q ss_pred eccCCCce-eeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054 128 FYGDGQPK-AIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~-~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g 166 (258)
... ...+ --+...+|+|++++.++.+.. . .|+.+.+-|
T Consensus 209 ~~~-~~~p~~r~~~peeva~~~~fL~s~~~~~itG~~i~vdg 249 (271)
T PRK06505 209 YQQ-RNSPLRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDS 249 (271)
T ss_pred HHh-hcCCccccCCHHHHHHHHHHHhCccccccCceEEeecC
Confidence 000 0001 124678999999999988642 2 366666654
No 251
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.017 Score=47.62 Aligned_cols=145 Identities=12% Similarity=0.080 Sum_probs=82.8
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHH----HHhCC--
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAI----KEVGN-- 54 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa----~~~g~-- 54 (258)
+.++.+|++|.+++.++++ +.|++||+++... +.+...++.++ ++.+.
T Consensus 66 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~ 145 (286)
T PRK07791 66 AVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAG 145 (286)
T ss_pred eEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccC
Confidence 5678899999888776654 5799999987521 22222333333 22210
Q ss_pred ---ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCC
Q 025054 55 ---IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPR 123 (258)
Q Consensus 55 ---vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~ 123 (258)
-.++|. |+....... +....|..+|+.++.+.+. .|+.+..|.|| +...+..... .
T Consensus 146 ~~~~g~Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~-------~- 212 (286)
T PRK07791 146 RAVDARIINTSSGAGLQGS----VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVF-------A- 212 (286)
T ss_pred CCCCcEEEEeCchhhCcCC----CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhH-------H-
Confidence 136776 665432221 1234577799998876653 58999999998 3222211100 0
Q ss_pred CceEeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
....-+. ..+..+...+|+|++++.++.+. . ..|+.+.+.|
T Consensus 213 ~~~~~~~--~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdg 255 (286)
T PRK07791 213 EMMAKPE--EGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEG 255 (286)
T ss_pred HHHhcCc--ccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcC
Confidence 0000001 11123567999999999998764 2 2466676654
No 252
>PRK06484 short chain dehydrogenase; Validated
Probab=96.98 E-value=0.013 Score=52.51 Aligned_cols=139 Identities=15% Similarity=0.137 Sum_probs=79.2
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc--------c-------------hhchHHHHHHH----HHhCC
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT--------E-------------VEDQFKLIAAI----KEVGN 54 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~--------~-------------~~~~~~li~aa----~~~g~ 54 (258)
+..+.+|++|++++.++++ +.|++||+++.. . +.....++.++ ++.+.
T Consensus 53 ~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 132 (520)
T PRK06484 53 HHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGH 132 (520)
T ss_pred eeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 5668999999998877764 479999998741 0 12223333333 33331
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
-.++|. |+....... +....|..+|+.++.+.+. .++.++.|+||.+...+...+......... ...
T Consensus 133 g~~iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~-~~~ 207 (520)
T PRK06484 133 GAAIVNVASGAGLVAL----PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPS-AVR 207 (520)
T ss_pred CCeEEEECCcccCCCC----CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhH-HHH
Confidence 126776 654433221 1245677799999877653 479999999998766543221100000000 000
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDD 154 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~ 154 (258)
.... ...+...+|+|+++..++.+
T Consensus 208 ~~~~----~~~~~~~~~va~~v~~l~~~ 231 (520)
T PRK06484 208 SRIP----LGRLGRPEEIAEAVFFLASD 231 (520)
T ss_pred hcCC----CCCCcCHHHHHHHHHHHhCc
Confidence 0000 01245788999998887764
No 253
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.96 E-value=0.0092 Score=48.37 Aligned_cols=148 Identities=14% Similarity=0.146 Sum_probs=83.6
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHH---hC
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKE---VG 53 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~---~g 53 (258)
+.++.+|++|.+++.++++ ..|++||+++... +.+...+++++.. .+
T Consensus 62 ~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~ 141 (258)
T PRK07533 62 PIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG 141 (258)
T ss_pred ceEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC
Confidence 4568899999988877653 5799999987420 1122223333321 12
Q ss_pred CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054 54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN 125 (258)
Q Consensus 54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~ 125 (258)
.++|. |+.+..... +....|..+|+.++.+.+. .++.+..|.||.+...+...+.... .. ...
T Consensus 142 --g~Ii~iss~~~~~~~----~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~--~~-~~~ 212 (258)
T PRK07533 142 --GSLLTMSYYGAEKVV----ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFD--AL-LED 212 (258)
T ss_pred --CEEEEEeccccccCC----ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcH--HH-HHH
Confidence 25666 665443211 1234566799998776653 5799999999988765432211000 00 000
Q ss_pred eEeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
. .......-+...+|+|.+++.++.+. . -.|+.+.+-|
T Consensus 213 ~---~~~~p~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdg 252 (258)
T PRK07533 213 A---AERAPLRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDG 252 (258)
T ss_pred H---HhcCCcCCCCCHHHHHHHHHHHhChhhccccCcEEeeCC
Confidence 0 00000012568899999999998764 2 3466666653
No 254
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.92 E-value=0.012 Score=47.93 Aligned_cols=149 Identities=11% Similarity=0.050 Sum_probs=84.8
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHH--hC
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKE--VG 53 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~--~g 53 (258)
+..+.+|+.|++++.++++ ..|++||+++... +.+...+.+++.. ..
T Consensus 58 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 137 (262)
T PRK07984 58 DIVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP 137 (262)
T ss_pred ceEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC
Confidence 5678899999998887764 4799999997321 1111223333321 11
Q ss_pred CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054 54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN 125 (258)
Q Consensus 54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~ 125 (258)
-.++|. |+.+.... .+....|..+|+.++.+.+. .++.+..|.||.+........... . ..
T Consensus 138 -~g~Iv~iss~~~~~~----~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~-----~-~~ 206 (262)
T PRK07984 138 -GSALLTLSYLGAERA----IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF-----R-KM 206 (262)
T ss_pred -CcEEEEEecCCCCCC----CCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCch-----H-HH
Confidence 135666 66554321 11234566799999877754 579999999998865422111000 0 00
Q ss_pred eEeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 126 ILFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 126 ~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
..-.........+...+|++.++..++.+.. ..|..+.+.|
T Consensus 207 ~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdg 249 (262)
T PRK07984 207 LAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDG 249 (262)
T ss_pred HHHHHHcCCCcCCCCHHHHHHHHHHHcCcccccccCcEEEECC
Confidence 0000000000125688999999999987642 2466777754
No 255
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.90 E-value=0.01 Score=48.11 Aligned_cols=148 Identities=10% Similarity=0.085 Sum_probs=82.6
Q ss_pred eEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-------c----------------hhchHHHHHHHHHh-CCcc
Q 025054 8 LIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-------E----------------VEDQFKLIAAIKEV-GNIK 56 (258)
Q Consensus 8 ~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-------~----------------~~~~~~li~aa~~~-g~vk 56 (258)
.++.+|++|++++.++++ ..|++||.++.. . +.....++.++... ..=.
T Consensus 61 ~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G 140 (260)
T PRK06603 61 FVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGG 140 (260)
T ss_pred eEEEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCc
Confidence 356899999998887764 479999988631 0 11122222322110 0013
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
++|. |+.+.... .+....|..+|+.++.+.+. .++.+..|.||.+-..+...+... ....-.+
T Consensus 141 ~Iv~isS~~~~~~----~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~-----~~~~~~~ 211 (260)
T PRK06603 141 SIVTLTYYGAEKV----IPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDF-----STMLKSH 211 (260)
T ss_pred eEEEEecCccccC----CCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCc-----HHHHHHH
Confidence 6776 66544321 11234577799998876643 579999999998865432111000 0000000
Q ss_pred ccCCCce-eeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054 129 YGDGQPK-AIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP 166 (258)
Q Consensus 129 ~g~g~~~-~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g 166 (258)
.. ..+ .-+...+|+|++++.++.+.. . .|+.+.+-|
T Consensus 212 ~~--~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdg 250 (260)
T PRK06603 212 AA--TAPLKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDC 250 (260)
T ss_pred Hh--cCCcCCCCCHHHHHHHHHHHhCcccccCcceEEEeCC
Confidence 00 001 125678999999999998642 2 356666654
No 256
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.013 Score=47.33 Aligned_cols=155 Identities=13% Similarity=0.048 Sum_probs=87.3
Q ss_pred ceeEEeccCCCHHHHHHhhC---CCcEEEEccCccc-------------------hhc----hHHHHHHHHHhCCccEEE
Q 025054 6 NCLIAQGDLHDHESLVKAIK---PVDVVISAVGRTE-------------------VED----QFKLIAAIKEVGNIKRFF 59 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~---g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~g~vk~~v 59 (258)
.+.++.+|++|++++.++++ ++|.+||+++... +.. .+.++...++.+ -.++|
T Consensus 58 ~~~~~~~D~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv 136 (259)
T PRK06125 58 DVAVHALDLSSPEAREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIV 136 (259)
T ss_pred ceEEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEE
Confidence 46788999999998887665 5899999987421 122 233333444444 35677
Q ss_pred c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCC-CCCCCCCCCCC-ce-Ee
Q 025054 60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTM-AQPGATAPPRE-NI-LF 128 (258)
Q Consensus 60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~-~~~~~~~~~~~-~~-~~ 128 (258)
. |+....... .....|..+|+.++.+.+. .++.++.|.||.+........ ........... .. .+
T Consensus 137 ~iss~~~~~~~----~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 212 (259)
T PRK06125 137 NVIGAAGENPD----ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQEL 212 (259)
T ss_pred EecCccccCCC----CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHH
Confidence 6 554332211 1223445689988776653 589999999999876542211 00000000000 00 00
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
... ....-+.+.+|+|+++..++.+.. -.|..+.+.|
T Consensus 213 ~~~-~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdg 251 (259)
T PRK06125 213 LAG-LPLGRPATPEEVADLVAFLASPRSGYTSGTVVTVDG 251 (259)
T ss_pred hcc-CCcCCCcCHHHHHHHHHHHcCchhccccCceEEecC
Confidence 000 000125688999999999987542 2456666654
No 257
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=96.83 E-value=0.016 Score=47.07 Aligned_cols=83 Identities=12% Similarity=-0.129 Sum_probs=49.2
Q ss_pred CCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHH
Q 025054 75 PAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATY 147 (258)
Q Consensus 75 ~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~ 147 (258)
+..+|..+|+.++.+.+. .|+.++.|+||++..+.. . .. . . .....-..+ .+ ..+...+|++.+
T Consensus 169 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~-~-~~-~-~-~~~~~~~~~-~~---~~~~~~~~va~~ 239 (267)
T TIGR02685 169 GFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDA-M-PF-E-V-QEDYRRKVP-LG---QREASAEQIADV 239 (267)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccc-c-ch-h-H-HHHHHHhCC-CC---cCCCCHHHHHHH
Confidence 345677899999887754 589999999998753210 0 00 0 0 000000001 00 124688999999
Q ss_pred HHHHhcCCC--CCCceEEEcC
Q 025054 148 TIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 148 ~~~~l~~~~--~~~~~~~l~g 166 (258)
+..++..+. ..|+.+.+.|
T Consensus 240 ~~~l~~~~~~~~~G~~~~v~g 260 (267)
T TIGR02685 240 VIFLVSPKAKYITGTCIKVDG 260 (267)
T ss_pred HHHHhCcccCCcccceEEECC
Confidence 999987652 2466666654
No 258
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.75 E-value=0.017 Score=47.23 Aligned_cols=149 Identities=11% Similarity=0.064 Sum_probs=86.3
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-------c----------------hhchHHHHHHHHHh--CC
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-------E----------------VEDQFKLIAAIKEV--GN 54 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-------~----------------~~~~~~li~aa~~~--g~ 54 (258)
+..+.+|++|++++.++++ +.|++||.++.. . +.....++.++... +
T Consensus 62 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~- 140 (272)
T PRK08159 62 FVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD- 140 (272)
T ss_pred ceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC-
Confidence 4568899999998887654 479999998742 0 22233444444321 1
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
-.++|. |+.+.... .+....|..+|+.++.+.+. .++.+..|.||++.............. ......
T Consensus 141 ~g~Iv~iss~~~~~~----~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~-~~~~~~ 215 (272)
T PRK08159 141 GGSILTLTYYGAEKV----MPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYI-LKWNEY 215 (272)
T ss_pred CceEEEEeccccccC----CCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHH-HHHHHh
Confidence 135665 66544321 12234566799998877653 579999999998865432111000000 000000
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
..+ - .-+...+|+|+++..++.+.. ..|..+.+.|
T Consensus 216 ~~p---~--~r~~~peevA~~~~~L~s~~~~~itG~~i~vdg 252 (272)
T PRK08159 216 NAP---L--RRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDS 252 (272)
T ss_pred CCc---c--cccCCHHHHHHHHHHHhCccccCccceEEEECC
Confidence 011 0 125688999999999997642 2466777765
No 259
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.74 E-value=0.021 Score=46.37 Aligned_cols=148 Identities=11% Similarity=0.053 Sum_probs=84.1
Q ss_pred eEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHH--hCC
Q 025054 8 LIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKE--VGN 54 (258)
Q Consensus 8 ~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~--~g~ 54 (258)
..+.+|+.|++++.++++ +.|++||+++... +.....+++++.. .+
T Consensus 59 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~- 137 (260)
T PRK06997 59 LVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD- 137 (260)
T ss_pred ceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC-
Confidence 467899999998887764 5799999986420 1111223333322 11
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
-.++|. |+.+.... .+....|..+|+.++.+.+. .++.++.|.||++-......+.... .. ...
T Consensus 138 ~g~Ii~iss~~~~~~----~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~--~~-~~~- 209 (260)
T PRK06997 138 DASLLTLSYLGAERV----VPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFG--KI-LDF- 209 (260)
T ss_pred CceEEEEeccccccC----CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchh--hH-HHH-
Confidence 246776 66554322 12234577799999877653 5799999999987653221110000 00 000
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
+...-... -+...+|+++++..++.++ . -.|+.+.+-|
T Consensus 210 -~~~~~p~~-r~~~pedva~~~~~l~s~~~~~itG~~i~vdg 249 (260)
T PRK06997 210 -VESNAPLR-RNVTIEEVGNVAAFLLSDLASGVTGEITHVDS 249 (260)
T ss_pred -HHhcCccc-ccCCHHHHHHHHHHHhCccccCcceeEEEEcC
Confidence 00000001 2568899999999998864 2 2456666653
No 260
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.029 Score=44.27 Aligned_cols=126 Identities=10% Similarity=-0.021 Sum_probs=77.7
Q ss_pred CceeEEeccCCCHHHHHHhh---C--CCcEEEEccCccc---------------------hhchHHHHHHHHH---hCCc
Q 025054 5 INCLIAQGDLHDHESLVKAI---K--PVDVVISAVGRTE---------------------VEDQFKLIAAIKE---VGNI 55 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al---~--g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~---~g~v 55 (258)
.+++++.+|++|.+++.+++ . +.|.|||+++... +....++++++.. .+ -
T Consensus 44 ~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~ 122 (222)
T PRK06953 44 LGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-G 122 (222)
T ss_pred ccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-C
Confidence 45678999999998888753 3 4799999987531 3345566666643 11 2
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEec
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFY 129 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (258)
.+++. |+......... ..+...|..+|..++.+++. .++.++.++||++......
T Consensus 123 g~iv~isS~~~~~~~~~-~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~------------------ 183 (222)
T PRK06953 123 GVLAVLSSRMGSIGDAT-GTTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG------------------ 183 (222)
T ss_pred CeEEEEcCccccccccc-CCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC------------------
Confidence 34555 44322221111 11123577899999988875 3577888888876554311
Q ss_pred cCCCceeeeeccchHHHHHHHHhcCC
Q 025054 130 GDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 130 g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
+ ......+|.+..+..++...
T Consensus 184 -~----~~~~~~~~~~~~~~~~~~~~ 204 (222)
T PRK06953 184 -A----QAALDPAQSVAGMRRVIAQA 204 (222)
T ss_pred -C----CCCCCHHHHHHHHHHHHHhc
Confidence 0 11357788888888877653
No 261
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.035 Score=44.71 Aligned_cols=118 Identities=12% Similarity=0.010 Sum_probs=71.5
Q ss_pred eEEeccCCCHHHHHHhhCCCcEEEEccCccc----------------hhchHHHHHHHH----Hh----CCccEEEcCCC
Q 025054 8 LIAQGDLHDHESLVKAIKPVDVVISAVGRTE----------------VEDQFKLIAAIK----EV----GNIKRFFPTEY 63 (258)
Q Consensus 8 ~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----------------~~~~~~li~aa~----~~----g~vk~~v~S~~ 63 (258)
..+.+|++|.+++.+.+.+.|++||+++... +.+...+++++. +. | ...++.|+.
T Consensus 61 ~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g-~~iiv~ss~ 139 (245)
T PRK12367 61 EWIKWECGKEESLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIP-KEIWVNTSE 139 (245)
T ss_pred eEEEeeCCCHHHHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCC-eEEEEEecc
Confidence 5678899999999999999999999997521 333444555443 21 2 223344443
Q ss_pred CCCCCCCCCCCCCccchhhHHHHHHHH---H-------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCC
Q 025054 64 GSNVDAGHPIEPAKSGYARKAKIRRAI---E-------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQ 133 (258)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~k~~~e~~l---~-------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~ 133 (258)
+.... +....|..+|+.++... + ..++..+.+.||.+...+ . .
T Consensus 140 a~~~~-----~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~------------~--~-------- 192 (245)
T PRK12367 140 AEIQP-----ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSEL------------N--P-------- 192 (245)
T ss_pred cccCC-----CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCccccc------------C--c--------
Confidence 32211 11235777999874322 1 246777777776542211 0 0
Q ss_pred ceeeeeccchHHHHHHHHhcCC
Q 025054 134 PKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 134 ~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
...++.+|+|+.+..++...
T Consensus 193 --~~~~~~~~vA~~i~~~~~~~ 212 (245)
T PRK12367 193 --IGIMSADFVAKQILDQANLG 212 (245)
T ss_pred --cCCCCHHHHHHHHHHHHhcC
Confidence 01467899999999988765
No 262
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=96.70 E-value=0.022 Score=46.79 Aligned_cols=102 Identities=10% Similarity=0.007 Sum_probs=72.4
Q ss_pred cCceeEEeccCCCHHHHHHhhC---------CCcEEEEccCccc------------------------hhchHHHHHHHH
Q 025054 4 MINCLIAQGDLHDHESLVKAIK---------PVDVVISAVGRTE------------------------VEDQFKLIAAIK 50 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~---------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~ 50 (258)
+.+.+.+.-|++++++++++.+ |--.|||.+|... +..+++++--.+
T Consensus 75 s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr 154 (322)
T KOG1610|consen 75 SPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLR 154 (322)
T ss_pred CCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 4557788999999999999876 4567899997321 455667777777
Q ss_pred HhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHH-------HhCCCCeEEEecCcccccCcC
Q 025054 51 EVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAI-------EAEGIPHTYVSCNCSFGFFLP 111 (258)
Q Consensus 51 ~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l-------~~~~~~~t~lr~~~~~~~~~~ 111 (258)
++. -|+|. ||.+..... +...+|..+|+.+|.+. +.-|+++.+|-||.|-.+...
T Consensus 155 ~ar--GRvVnvsS~~GR~~~----p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 155 RAR--GRVVNVSSVLGRVAL----PALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred hcc--CeEEEecccccCccC----cccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence 665 48887 655443221 23567888999998654 336999999999966665543
No 263
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.59 E-value=0.027 Score=45.53 Aligned_cols=155 Identities=12% Similarity=0.052 Sum_probs=86.7
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc----------h---------------hchHHHHHHHH-Hh
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE----------V---------------EDQFKLIAAIK-EV 52 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~----------~---------------~~~~~li~aa~-~~ 52 (258)
++.++.+|++|.+++.++++ +.|++||+++... . ...+.++.... +.
T Consensus 49 ~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~ 128 (259)
T PRK08340 49 EVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKK 128 (259)
T ss_pred CceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcC
Confidence 46788999999998887764 6899999987421 0 01122333333 23
Q ss_pred CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCC-CCCCCC---CC
Q 025054 53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPT-MAQPGA---TA 120 (258)
Q Consensus 53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~-~~~~~~---~~ 120 (258)
+ -.++|. |+...... .++...|..+|+.++.+.+. .|+.+..|.||++-..+... +..... ..
T Consensus 129 ~-~g~iv~isS~~~~~~----~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~ 203 (259)
T PRK08340 129 M-KGVLVYLSSVSVKEP----MPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVS 203 (259)
T ss_pred C-CCEEEEEeCcccCCC----CCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCc
Confidence 3 457887 65543221 12234566699998877764 47899999999876654311 000000 00
Q ss_pred CCCC-ceEeccCCCceeeeeccchHHHHHHHHhcCC-CC-CCceEEEcC
Q 025054 121 PPRE-NILFYGDGQPKAIFNKEEDIATYTIKAVDDP-RT-LNKTLYLRP 166 (258)
Q Consensus 121 ~~~~-~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~-~~~~~~l~g 166 (258)
.... .-.+...-.. .-+...+|+|++++.++.++ .. .|..+.+.|
T Consensus 204 ~~~~~~~~~~~~~p~-~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdg 251 (259)
T PRK08340 204 FEETWEREVLERTPL-KRTGRWEELGSLIAFLLSENAEYMLGSTIVFDG 251 (259)
T ss_pred hHHHHHHHHhccCCc-cCCCCHHHHHHHHHHHcCcccccccCceEeecC
Confidence 0000 0000000000 12567899999999998865 22 355666654
No 264
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.54 E-value=0.025 Score=45.80 Aligned_cols=148 Identities=11% Similarity=0.012 Sum_probs=82.9
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc-------c----------------hhchHHHHHHHHHh--C
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT-------E----------------VEDQFKLIAAIKEV--G 53 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~-------~----------------~~~~~~li~aa~~~--g 53 (258)
.+..+.+|+.|++++.++++ +.|++||.++.. . +.....+..++... .
T Consensus 58 ~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~ 137 (256)
T PRK07889 58 PAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE 137 (256)
T ss_pred CCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc
Confidence 36688999999988877653 589999998742 1 11112222332210 1
Q ss_pred CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCc
Q 025054 54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPREN 125 (258)
Q Consensus 54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~ 125 (258)
-.++|. |+.+.. . .+....|..+|+.++.+.+. .|+.++.|.||.+...+...+. . ... .
T Consensus 138 -~g~Iv~is~~~~~-~----~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~--~---~~~-~ 205 (256)
T PRK07889 138 -GGSIVGLDFDATV-A----WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIP--G---FEL-L 205 (256)
T ss_pred -CceEEEEeecccc-c----CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhccc--C---cHH-H
Confidence 135665 433211 0 11223456799998876653 5799999999988765432211 0 000 0
Q ss_pred eEeccCCCcee--eeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 126 ILFYGDGQPKA--IFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 126 ~~~~g~g~~~~--~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
...+.. ..+. .+...+|+|+++..++.++. -.|+.+.+-|
T Consensus 206 ~~~~~~-~~p~~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdg 249 (256)
T PRK07889 206 EEGWDE-RAPLGWDVKDPTPVARAVVALLSDWFPATTGEIVHVDG 249 (256)
T ss_pred HHHHHh-cCccccccCCHHHHHHHHHHHhCcccccccceEEEEcC
Confidence 000000 1111 35789999999999998652 2456666653
No 265
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=96.49 E-value=0.0046 Score=47.36 Aligned_cols=94 Identities=20% Similarity=0.241 Sum_probs=57.4
Q ss_pred eeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc-------------------hhchHHHHHHHHHhCCccEEEc
Q 025054 7 CLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE-------------------VEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~vk~~v~ 60 (258)
+.++.+|++|++++.++++. ++.|||+++... +.+..+|.++..... ++.||.
T Consensus 55 v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~ 133 (181)
T PF08659_consen 55 VEYVQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFIL 133 (181)
T ss_dssp EEEEE--TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEE
T ss_pred eeeeccCccCHHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEE
Confidence 67789999999999998863 478999997532 456678888877777 999887
Q ss_pred -CCCCCCCCCCCCCCCCccchhhHHHHHHHH---HhCCCCeEEEecCcc
Q 025054 61 -TEYGSNVDAGHPIEPAKSGYARKAKIRRAI---EAEGIPHTYVSCNCS 105 (258)
Q Consensus 61 -S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l---~~~~~~~t~lr~~~~ 105 (258)
||...-... +....|.......+.+. ++.+.+++.|.-|.+
T Consensus 134 ~SSis~~~G~----~gq~~YaaAN~~lda~a~~~~~~g~~~~sI~wg~W 178 (181)
T PF08659_consen 134 FSSISSLLGG----PGQSAYAAANAFLDALARQRRSRGLPAVSINWGAW 178 (181)
T ss_dssp EEEHHHHTT-----TTBHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-EB
T ss_pred ECChhHhccC----cchHhHHHHHHHHHHHHHHHHhCCCCEEEEEcccc
Confidence 664321111 12345555555555544 347899998886543
No 266
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.43 E-value=0.092 Score=45.56 Aligned_cols=120 Identities=11% Similarity=0.029 Sum_probs=70.3
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----------------hhchHHHHHHH----HHhCC--cc-EEEcCC
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----------------VEDQFKLIAAI----KEVGN--IK-RFFPTE 62 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----------------~~~~~~li~aa----~~~g~--vk-~~v~S~ 62 (258)
++..+.+|++|.+++.+.+.++|++||+++... +.+..++++++ ++.+. .+ .+|.++
T Consensus 225 ~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~S 304 (406)
T PRK07424 225 PVKTLHWQVGQEAALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTS 304 (406)
T ss_pred CeEEEEeeCCCHHHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEc
Confidence 356788999999999999999999999887421 33444555554 33321 12 244432
Q ss_pred CCCCCCCCCCCCCCc-cchhhHHHHHHHH--Hh--CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceee
Q 025054 63 YGSNVDAGHPIEPAK-SGYARKAKIRRAI--EA--EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAI 137 (258)
Q Consensus 63 ~~~~~~~~~~~~~~~-~~~~~k~~~e~~l--~~--~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 137 (258)
.+. .. ++.. .|..+|+.++.+. +. .+.....+.+|.+...+ .+..
T Consensus 305 sa~-~~-----~~~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~------------------------~~~~ 354 (406)
T PRK07424 305 EAE-VN-----PAFSPLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNL------------------------NPIG 354 (406)
T ss_pred ccc-cc-----CCCchHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCC------------------------CcCC
Confidence 221 11 1223 4667999998743 22 34444444444321110 0112
Q ss_pred eeccchHHHHHHHHhcCC
Q 025054 138 FNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 138 ~v~~~D~a~~~~~~l~~~ 155 (258)
.++.+|+|+.++.+++.+
T Consensus 355 ~~spe~vA~~il~~i~~~ 372 (406)
T PRK07424 355 VMSADWVAKQILKLAKRD 372 (406)
T ss_pred CCCHHHHHHHHHHHHHCC
Confidence 468899999999988765
No 267
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.041 Score=43.55 Aligned_cols=132 Identities=15% Similarity=0.090 Sum_probs=81.0
Q ss_pred ceeEEeccCCCHHHHHHhhC----CCcEEEEccCcc-------------c-----------hhchHHHHHHHHH--hCCc
Q 025054 6 NCLIAQGDLHDHESLVKAIK----PVDVVISAVGRT-------------E-----------VEDQFKLIAAIKE--VGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~----g~d~Vi~~~~~~-------------~-----------~~~~~~li~aa~~--~g~v 55 (258)
+++++.+|++|.+++.++++ +.|++||+++.. . +.....+++++.. .. -
T Consensus 45 ~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-~ 123 (223)
T PRK05884 45 DVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRS-G 123 (223)
T ss_pred cCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-C
Confidence 56788999999999888775 589999987520 0 1112233333322 11 1
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceE
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENIL 127 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (258)
.++|. |+... +....|..+|+.++.+.+. .++.+..|.||++....... .. .
T Consensus 124 g~Iv~isS~~~--------~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~--------~~--~-- 183 (223)
T PRK05884 124 GSIISVVPENP--------PAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDG--------LS--R-- 183 (223)
T ss_pred CeEEEEecCCC--------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhh--------cc--C--
Confidence 36776 55431 1234677799999877653 57999999999875432100 00 0
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCC-C-CCCceEEEcC
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDP-R-TLNKTLYLRP 166 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~-~~~~~~~l~g 166 (258)
.+.-..+|+++.+..++..+ . -.|+.+.+.|
T Consensus 184 --------~p~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdg 216 (223)
T PRK05884 184 --------TPPPVAAEIARLALFLTTPAARHITGQTLHVSH 216 (223)
T ss_pred --------CCCCCHHHHHHHHHHHcCchhhccCCcEEEeCC
Confidence 01127799999999988764 2 2456666654
No 268
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=96.26 E-value=0.028 Score=45.43 Aligned_cols=142 Identities=11% Similarity=-0.003 Sum_probs=79.0
Q ss_pred ceeEEeccCCCHHHHHHhhCC-----------CcEEEEccCccc--------------------------hhchHHHHHH
Q 025054 6 NCLIAQGDLHDHESLVKAIKP-----------VDVVISAVGRTE--------------------------VEDQFKLIAA 48 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g-----------~d~Vi~~~~~~~--------------------------~~~~~~li~a 48 (258)
.+.++.+|++|.+++.++++. .|+|||+++... +...+.++.+
T Consensus 56 ~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~ 135 (256)
T TIGR01500 56 RVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKA 135 (256)
T ss_pred eEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 477889999999988776642 158899886310 1112334444
Q ss_pred HHHh-CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCC
Q 025054 49 IKEV-GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGAT 119 (258)
Q Consensus 49 a~~~-g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~ 119 (258)
.++. +.-.++|. |+...... .+....|..+|+.++.+.+. .++.+..+.||++-..+........ .
T Consensus 136 l~~~~~~~~~iv~isS~~~~~~----~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~-~ 210 (256)
T TIGR01500 136 FKDSPGLNRTVVNISSLCAIQP----FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREES-V 210 (256)
T ss_pred HhhcCCCCCEEEEECCHHhCCC----CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhc-C
Confidence 4433 21246776 66543221 11234566799999877653 4789999999988665432110000 0
Q ss_pred CCCCCceEeccCCCceeeeeccchHHHHHHHHhcC
Q 025054 120 APPRENILFYGDGQPKAIFNKEEDIATYTIKAVDD 154 (258)
Q Consensus 120 ~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~ 154 (258)
... ...........-.+...+|+|..++.++..
T Consensus 211 ~~~--~~~~~~~~~~~~~~~~p~eva~~~~~l~~~ 243 (256)
T TIGR01500 211 DPD--MRKGLQELKAKGKLVDPKVSAQKLLSLLEK 243 (256)
T ss_pred Chh--HHHHHHHHHhcCCCCCHHHHHHHHHHHHhc
Confidence 000 000000000001267899999999999864
No 269
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.18 E-value=0.069 Score=43.65 Aligned_cols=133 Identities=20% Similarity=0.150 Sum_probs=79.4
Q ss_pred ceeEEeccCCCHHHHHHhh-------CCCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCc
Q 025054 6 NCLIAQGDLHDHESLVKAI-------KPVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNI 55 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al-------~g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~v 55 (258)
.+.++++|++|.+++.+++ .++|++||.++... +-.++.++.-.++.+ =
T Consensus 64 ~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~ 142 (282)
T KOG1205|consen 64 KVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-D 142 (282)
T ss_pred ccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-C
Confidence 4788999999999998665 48999999998642 334556666666664 3
Q ss_pred cEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH---h----CCCCeE-EEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 56 KRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE---A----EGIPHT-YVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 56 k~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---~----~~~~~t-~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
-|+|. ||....... +...-|.++|++++.+.. + .+.... ++.||++-..+...-.. + ... .
T Consensus 143 GhIVvisSiaG~~~~----P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~~~~-~---~~~-~- 212 (282)
T KOG1205|consen 143 GHIVVISSIAGKMPL----PFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTGKELL-G---EEG-K- 212 (282)
T ss_pred CeEEEEeccccccCC----CcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccchhhc-c---ccc-c-
Confidence 47776 655433221 122357779999986653 2 222122 47888777665443111 0 000 0
Q ss_pred EeccCCCceeeeeccchHHH--HHHHHhcCC
Q 025054 127 LFYGDGQPKAIFNKEEDIAT--YTIKAVDDP 155 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~--~~~~~l~~~ 155 (258)
....+.....|++. .++.++..+
T Consensus 213 ------~~~~~~~~~~~~~~~~~~~~~i~~~ 237 (282)
T KOG1205|consen 213 ------SQQGPFLRTEDVADPEAVAYAISTP 237 (282)
T ss_pred ------ccccchhhhhhhhhHHHHHHHHhcC
Confidence 22334445556644 677776665
No 270
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.044 Score=45.82 Aligned_cols=103 Identities=13% Similarity=0.078 Sum_probs=62.8
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------hhc----hHHHHHHHHHhCCcc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------VED----QFKLIAAIKEVGNIK 56 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------~~~----~~~li~aa~~~g~vk 56 (258)
.+.++.+|+.|.+++.++++ +.|++||.++... ..+ .+.++...++. -.
T Consensus 66 ~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~ 143 (313)
T PRK05854 66 KLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RA 143 (313)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CC
Confidence 47889999999998887654 4799999987421 112 22333333333 24
Q ss_pred EEEc-CCCCCCCCC--------CCCCCCCccchhhHHHHHHHHHh---------CCCCeEEEecCcccccCc
Q 025054 57 RFFP-TEYGSNVDA--------GHPIEPAKSGYARKAKIRRAIEA---------EGIPHTYVSCNCSFGFFL 110 (258)
Q Consensus 57 ~~v~-S~~~~~~~~--------~~~~~~~~~~~~~k~~~e~~l~~---------~~~~~t~lr~~~~~~~~~ 110 (258)
++|. |+....... .....+...|..+|...+.+.++ .++.+..+.||.+...+.
T Consensus 144 riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~ 215 (313)
T PRK05854 144 RVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLL 215 (313)
T ss_pred CeEEEechhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcc
Confidence 6665 554321110 01122334566799988765532 368999999998876654
No 271
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.08 E-value=0.023 Score=49.02 Aligned_cols=52 Identities=27% Similarity=0.275 Sum_probs=42.2
Q ss_pred cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
..+++.++.|.+|.++|.+.++++|+||+++++. ....++++|.++| + ++|-
T Consensus 45 ~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~---~~~~v~~~~i~~g-~-~yvD 96 (386)
T PF03435_consen 45 GDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF---FGEPVARACIEAG-V-HYVD 96 (386)
T ss_dssp TTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG---GHHHHHHHHHHHT---EEEE
T ss_pred ccceeEEEEecCCHHHHHHHHhcCCEEEECCccc---hhHHHHHHHHHhC-C-Ceec
Confidence 3578999999999999999999999999999876 5778999999999 4 6665
No 272
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.15 Score=40.50 Aligned_cols=95 Identities=8% Similarity=-0.085 Sum_probs=59.1
Q ss_pred eeEEeccCCCHHHHHHhhC--------CCcEEEEccCccc------------------------hhchHHHHHHHHHhCC
Q 025054 7 CLIAQGDLHDHESLVKAIK--------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVGN 54 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~--------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g~ 54 (258)
+..+..|+.|++++.++++ +.|++||+++... +...+.++...++.++
T Consensus 56 ~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~ 135 (227)
T PRK08862 56 VYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNK 135 (227)
T ss_pred eEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 5567789999998876653 5799999986310 0111222333333321
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCccccc
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGF 108 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~ 108 (258)
-..+|. |+..... ....|..+|+.++.+.+. .++.+..|.||++..+
T Consensus 136 ~g~Iv~isS~~~~~-------~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 136 KGVIVNVISHDDHQ-------DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred CceEEEEecCCCCC-------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 236666 6543221 234577799998877653 5799999999987665
No 273
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=95.72 E-value=0.11 Score=40.74 Aligned_cols=104 Identities=11% Similarity=0.054 Sum_probs=61.4
Q ss_pred ccCceeEEeccCCCHHHHHHhhC---------CCcEEEEccCccc------------------------hhchHHHHHHH
Q 025054 3 YMINCLIAQGDLHDHESLVKAIK---------PVDVVISAVGRTE------------------------VEDQFKLIAAI 49 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~---------g~d~Vi~~~~~~~------------------------~~~~~~li~aa 49 (258)
.++++.+++.|++..+++.++.+ |.+.+++.++... +-..+.++-..
T Consensus 52 ~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLL 131 (249)
T KOG1611|consen 52 SDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLL 131 (249)
T ss_pred cCCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHH
Confidence 36789999999998888888765 5678888887531 22233333333
Q ss_pred HHhC--------Ccc--EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccc
Q 025054 50 KEVG--------NIK--RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFG 107 (258)
Q Consensus 50 ~~~g--------~vk--~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~ 107 (258)
+++. ++. .+|. |+.+...+... ..+...|..+|.++-...++ .++-++.|+|||+-.
T Consensus 132 kkaas~~~gd~~s~~raaIinisS~~~s~~~~~-~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~T 206 (249)
T KOG1611|consen 132 KKAASKVSGDGLSVSRAAIINISSSAGSIGGFR-PGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQT 206 (249)
T ss_pred HHHhhcccCCcccccceeEEEeeccccccCCCC-CcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEc
Confidence 3322 022 3554 44433322211 12334555699998877765 345667777776654
No 274
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.72 E-value=0.15 Score=41.20 Aligned_cols=155 Identities=9% Similarity=-0.018 Sum_probs=84.5
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHhC--
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVG-- 53 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g-- 53 (258)
+..+.+|+.|.+++.++++ +.|++||+++... +.....+++++...-
T Consensus 53 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 132 (262)
T TIGR03325 53 VVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVA 132 (262)
T ss_pred eEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhh
Confidence 6778999999888777664 5799999986310 222345555554321
Q ss_pred CccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 54 NIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 54 ~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
+-.++|. |+....... +....|..+|+.++.+.+. ..+.+..|.||++...+..... ...........
T Consensus 133 ~~g~iv~~sS~~~~~~~----~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~-~~~~~~~~~~~ 207 (262)
T TIGR03325 133 SRGSVIFTISNAGFYPN----GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKS-LGMADKSISTV 207 (262)
T ss_pred cCCCEEEEeccceecCC----CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccc-ccccccccccc
Confidence 0134555 443322211 1234567799999987754 2388999999988765432110 00000000000
Q ss_pred Eecc--CCCce-eeeeccchHHHHHHHHhcCC--CC-CCceEEEcC
Q 025054 127 LFYG--DGQPK-AIFNKEEDIATYTIKAVDDP--RT-LNKTLYLRP 166 (258)
Q Consensus 127 ~~~g--~g~~~-~~~v~~~D~a~~~~~~l~~~--~~-~~~~~~l~g 166 (258)
..-. ....+ .-+...+|+|.++..++.++ .. .|..+.+.|
T Consensus 208 ~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdg 253 (262)
T TIGR03325 208 PLGDMLKSVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDG 253 (262)
T ss_pred chhhhhhhcCCCCCCCChHHhhhheeeeecCCCcccccceEEEecC
Confidence 0000 00000 12567899999998888763 22 456666654
No 275
>PTZ00325 malate dehydrogenase; Provisional
Probab=95.62 E-value=0.016 Score=48.56 Aligned_cols=98 Identities=18% Similarity=0.120 Sum_probs=61.0
Q ss_pred EeccCCCHHHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CCCCCCC--------
Q 025054 10 AQGDLHDHESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNV-------- 67 (258)
Q Consensus 10 ~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~-------- 67 (258)
...+.+|+.++.++++|+|+|+++++... +...+++++++++++ ++++|. ++.+.+.
T Consensus 60 ~v~~~td~~~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPvdv~~~~~~~~ 138 (321)
T PTZ00325 60 KVTGYADGELWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPVNSTVPIAAET 138 (321)
T ss_pred eEEEecCCCchHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHhh
Confidence 34455565556789999999999998642 457889999999999 999997 6654421
Q ss_pred -CCCCCCCCCccchh---hHHHHHHHHHh-CCCCeEEEecCcccccC
Q 025054 68 -DAGHPIEPAKSGYA---RKAKIRRAIEA-EGIPHTYVSCNCSFGFF 109 (258)
Q Consensus 68 -~~~~~~~~~~~~~~---~k~~~e~~l~~-~~~~~t~lr~~~~~~~~ 109 (258)
....+.++..-+.- .-...+..+.+ .++...-++ ++++|.-
T Consensus 139 ~~~~sg~p~~~viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeH 184 (321)
T PTZ00325 139 LKKAGVYDPRKLFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGH 184 (321)
T ss_pred hhhccCCChhheeechhHHHHHHHHHHHHHhCcChhheE-EEEEeec
Confidence 11222333322221 12233334433 577777777 6677643
No 276
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.61 E-value=0.15 Score=42.77 Aligned_cols=126 Identities=15% Similarity=0.038 Sum_probs=74.8
Q ss_pred eeEEeccCCC--HH---HHHHhhCC--CcEEEEccCcc-----c----------------h----hchHHHHHHHHHhCC
Q 025054 7 CLIAQGDLHD--HE---SLVKAIKP--VDVVISAVGRT-----E----------------V----EDQFKLIAAIKEVGN 54 (258)
Q Consensus 7 v~~~~~D~~d--~~---~l~~al~g--~d~Vi~~~~~~-----~----------------~----~~~~~li~aa~~~g~ 54 (258)
+..+.+|+++ .+ .+.+.+.+ +|++||.++.. . + ...+.++...++.+
T Consensus 106 ~~~~~~Dl~~~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~- 184 (320)
T PLN02780 106 IKTVVVDFSGDIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK- 184 (320)
T ss_pred EEEEEEECCCCcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-
Confidence 5667788874 23 34445554 45899998642 0 1 22233444445556
Q ss_pred ccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 55 IKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 55 vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
..++|. |+........ .+....|..+|+.++.+.+. .|+.++.++||.+-.++... ..
T Consensus 185 ~g~IV~iSS~a~~~~~~--~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~---------~~--- 250 (320)
T PLN02780 185 KGAIINIGSGAAIVIPS--DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI---------RR--- 250 (320)
T ss_pred CcEEEEEechhhccCCC--CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc---------cC---
Confidence 678887 6654321110 11235677799999876643 58999999999886654221 00
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDD 154 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~ 154 (258)
......+.+++|+.+...+..
T Consensus 251 -------~~~~~~~p~~~A~~~~~~~~~ 271 (320)
T PLN02780 251 -------SSFLVPSSDGYARAALRWVGY 271 (320)
T ss_pred -------CCCCCCCHHHHHHHHHHHhCC
Confidence 001134788999999998853
No 277
>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []. It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.
Probab=95.51 E-value=0.029 Score=47.42 Aligned_cols=80 Identities=14% Similarity=0.184 Sum_probs=58.3
Q ss_pred CCcEEEEccCccc--------------hhchHHHHHHHH----HhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHH
Q 025054 26 PVDVVISAVGRTE--------------VEDQFKLIAAIK----EVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKI 86 (258)
Q Consensus 26 g~d~Vi~~~~~~~--------------~~~~~~li~aa~----~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~ 86 (258)
++..+|++.|... .+....++.+.. +.+ .|++|. ++++...-. ...+|+..|.+.
T Consensus 203 ~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~-~K~~vIvTSfn~~~~s-----~~f~Yfk~K~~L 276 (410)
T PF08732_consen 203 DIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTG-NKKLVIVTSFNNNAIS-----SMFPYFKTKGEL 276 (410)
T ss_pred hhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCC-CceEEEEEecCcchhh-----hhhhhhHHHHHH
Confidence 4577888877542 344556777766 667 899988 888876422 246899999999
Q ss_pred HHHHHhC---CC-CeEEEecCcccccCcC
Q 025054 87 RRAIEAE---GI-PHTYVSCNCSFGFFLP 111 (258)
Q Consensus 87 e~~l~~~---~~-~~t~lr~~~~~~~~~~ 111 (258)
|+-|... .+ ..+|+|||...|.-.+
T Consensus 277 E~dl~~~l~~~l~~lvILRPGplvG~h~~ 305 (410)
T PF08732_consen 277 ENDLQNLLPPKLKHLVILRPGPLVGEHGS 305 (410)
T ss_pred HHHHHhhcccccceEEEecCccccCCCCC
Confidence 9999873 24 5899999999986544
No 278
>PLN00015 protochlorophyllide reductase
Probab=95.32 E-value=0.19 Score=41.94 Aligned_cols=144 Identities=16% Similarity=0.117 Sum_probs=77.3
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHhCC
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVGN 54 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g~ 54 (258)
.+.++..|+.|.+++.++++ +.|++||.++... +...+.++...++.+.
T Consensus 48 ~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~ 127 (308)
T PLN00015 48 SYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDY 127 (308)
T ss_pred eEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 46778999999998877654 5799999997420 1223444555554431
Q ss_pred -ccEEEc-CCCCCCCCC-----C--------------------------CCCCCCccchhhHHHHHHHH----Hh----C
Q 025054 55 -IKRFFP-TEYGSNVDA-----G--------------------------HPIEPAKSGYARKAKIRRAI----EA----E 93 (258)
Q Consensus 55 -vk~~v~-S~~~~~~~~-----~--------------------------~~~~~~~~~~~~k~~~e~~l----~~----~ 93 (258)
..++|. |+....... . ....+...|..+|+...... ++ .
T Consensus 128 ~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~ 207 (308)
T PLN00015 128 PSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEET 207 (308)
T ss_pred CCCEEEEEeccccccccccccCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccC
Confidence 257887 654332100 0 00112234666999744332 22 4
Q ss_pred CCCeEEEecCcccc-cCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 94 GIPHTYVSCNCSFG-FFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 94 ~~~~t~lr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
|+.++.++||++.. ++...... . .......... .....+.+.++.|+.++.++.++
T Consensus 208 gi~v~~v~PG~v~~t~~~~~~~~-~----~~~~~~~~~~-~~~~~~~~pe~~a~~~~~l~~~~ 264 (308)
T PLN00015 208 GITFASLYPGCIATTGLFREHIP-L----FRLLFPPFQK-YITKGYVSEEEAGKRLAQVVSDP 264 (308)
T ss_pred CeEEEEecCCcccCccccccccH-H----HHHHHHHHHH-HHhcccccHHHhhhhhhhhcccc
Confidence 79999999998853 33221100 0 0000000000 00012467899999999887764
No 279
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=95.26 E-value=0.045 Score=46.82 Aligned_cols=50 Identities=26% Similarity=0.329 Sum_probs=44.0
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
+++.++.|..|.+++.+++++.|+||+++++. ...++++||.++| | +++-
T Consensus 48 ~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~---~~~~i~ka~i~~g-v-~yvD 97 (389)
T COG1748 48 KVEALQVDAADVDALVALIKDFDLVINAAPPF---VDLTILKACIKTG-V-DYVD 97 (389)
T ss_pred cceeEEecccChHHHHHHHhcCCEEEEeCCch---hhHHHHHHHHHhC-C-CEEE
Confidence 68999999999999999999999999999886 4668999999999 4 4554
No 280
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.25 E-value=0.28 Score=41.02 Aligned_cols=144 Identities=16% Similarity=0.117 Sum_probs=77.0
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc------------------------hhchHHHHHHHHHhC-
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE------------------------VEDQFKLIAAIKEVG- 53 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~------------------------~~~~~~li~aa~~~g- 53 (258)
.+.++.+|++|.+++.++++ +.|++||.++... +...+.++...++.+
T Consensus 54 ~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~ 133 (314)
T TIGR01289 54 SYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPN 133 (314)
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCC
Confidence 46778999999988776653 5899999987410 122344455555442
Q ss_pred CccEEEc-CCCCCCCCC-----------------------------CCCCCCCccchhhHHHHHHHHH----h----CCC
Q 025054 54 NIKRFFP-TEYGSNVDA-----------------------------GHPIEPAKSGYARKAKIRRAIE----A----EGI 95 (258)
Q Consensus 54 ~vk~~v~-S~~~~~~~~-----------------------------~~~~~~~~~~~~~k~~~e~~l~----~----~~~ 95 (258)
+-.++|. |+....... ..+..+...|..+|+....+.+ + .++
T Consensus 134 ~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi 213 (314)
T TIGR01289 134 KDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGI 213 (314)
T ss_pred CCCeEEEEecCccccccCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCe
Confidence 1257887 654321100 0011122346679998544332 1 378
Q ss_pred CeEEEecCccc-ccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 96 PHTYVSCNCSF-GFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 96 ~~t~lr~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
.++.|+||++. ..+...... . .. ..+..... .....+.+.++.|+.++.++.++
T Consensus 214 ~v~~v~PG~v~~T~l~~~~~~-~---~~-~~~~~~~~-~~~~~~~~~~~~a~~l~~~~~~~ 268 (314)
T TIGR01289 214 TFASLYPGCIADTGLFREHVP-L---FR-TLFPPFQK-YITKGYVSEEEAGERLAQVVSDP 268 (314)
T ss_pred EEEEecCCcccCCcccccccH-H---HH-HHHHHHHH-HHhccccchhhhhhhhHHhhcCc
Confidence 89999999885 333211000 0 00 00000000 00012568899999999988765
No 281
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=95.09 E-value=0.084 Score=42.19 Aligned_cols=149 Identities=13% Similarity=0.075 Sum_probs=86.7
Q ss_pred CceeEEeccCCCHHHHHHhh--------CCCcEEEEccCccc---------------------------hhchHHHHHHH
Q 025054 5 INCLIAQGDLHDHESLVKAI--------KPVDVVISAVGRTE---------------------------VEDQFKLIAAI 49 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al--------~g~d~Vi~~~~~~~---------------------------~~~~~~li~aa 49 (258)
.+.+++.+|+.|++++.+++ .+.|+++|+++... +...+.++...
T Consensus 44 ~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (241)
T PF13561_consen 44 YGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLM 123 (241)
T ss_dssp TTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999998888764 45799998875321 12223333333
Q ss_pred HHhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh--------CCCCeEEEecCcccccCcCCCCCCCCCC
Q 025054 50 KEVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA--------EGIPHTYVSCNCSFGFFLPTMAQPGATA 120 (258)
Q Consensus 50 ~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~--------~~~~~t~lr~~~~~~~~~~~~~~~~~~~ 120 (258)
++.| .+|. |+.+..... +....|..+|+.++.+.+. .|+.+..|.||++..............
T Consensus 124 ~~~g---sii~iss~~~~~~~----~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~- 195 (241)
T PF13561_consen 124 KKGG---SIINISSIAAQRPM----PGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEF- 195 (241)
T ss_dssp HHEE---EEEEEEEGGGTSBS----TTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHH-
T ss_pred hhCC---CcccccchhhcccC----ccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccch-
Confidence 3333 5665 554432221 1234555689999877753 589999999999887543221100000
Q ss_pred CCCCceEeccCCCceeeeeccchHHHHHHHHhcCC-CC-CCceEEEcC
Q 025054 121 PPRENILFYGDGQPKAIFNKEEDIATYTIKAVDDP-RT-LNKTLYLRP 166 (258)
Q Consensus 121 ~~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~-~~-~~~~~~l~g 166 (258)
.....-..| -. .+...+|+|.++..++++. .. .|+.+.+-|
T Consensus 196 ~~~~~~~~p---l~--r~~~~~evA~~v~fL~s~~a~~itG~~i~vDG 238 (241)
T PF13561_consen 196 LEELKKRIP---LG--RLGTPEEVANAVLFLASDAASYITGQVIPVDG 238 (241)
T ss_dssp HHHHHHHST---TS--SHBEHHHHHHHHHHHHSGGGTTGTSEEEEEST
T ss_pred hhhhhhhhc---cC--CCcCHHHHHHHHHHHhCccccCccCCeEEECC
Confidence 000000011 11 1458999999999999875 23 366666654
No 282
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=94.65 E-value=0.23 Score=52.62 Aligned_cols=97 Identities=13% Similarity=0.084 Sum_probs=69.0
Q ss_pred eeEEeccCCCHHHHHHhhC------CCcEEEEccCccc-------------------hhchHHHHHHHHHhCCccEEEc-
Q 025054 7 CLIAQGDLHDHESLVKAIK------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVGNIKRFFP- 60 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~vk~~v~- 60 (258)
+.++.+|++|.+++.++++ +.|.|||.++... +.+..+++.++.... .+++|.
T Consensus 2096 v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~-~~~IV~~ 2174 (2582)
T TIGR02813 2096 AEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAEN-IKLLALF 2174 (2582)
T ss_pred EEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEE
Confidence 6788999999998888775 4799999998521 566788888888776 788886
Q ss_pred CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-----CCCCeEEEecCccccc
Q 025054 61 TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-----EGIPHTYVSCNCSFGF 108 (258)
Q Consensus 61 S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-----~~~~~t~lr~~~~~~~ 108 (258)
||....... .....|..+|..+..+.+. .++.++.|.+|.+-+.
T Consensus 2175 SSvag~~G~----~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813 2175 SSAAGFYGN----TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred echhhcCCC----CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence 665433221 1234566788877655432 3578889998877653
No 283
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=94.51 E-value=0.17 Score=37.64 Aligned_cols=83 Identities=22% Similarity=0.253 Sum_probs=54.8
Q ss_pred CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhchHHHHHHHHHhCCccEE
Q 025054 5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQFKLIAAIKEVGNIKRF 58 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~~~li~aa~~~g~vk~~ 58 (258)
.++.+++.|+.+.+++.++++ ..|++||+++... +.....+..++...+ -.++
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~i 130 (167)
T PF00106_consen 52 AKITFIECDLSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKI 130 (167)
T ss_dssp SEEEEEESETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccce
Confidence 357889999999988888765 5799999998542 233445555555544 4667
Q ss_pred Ec-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh
Q 025054 59 FP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA 92 (258)
Q Consensus 59 v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~ 92 (258)
|. |+....... +....|..+|+.++.+.+.
T Consensus 131 v~~sS~~~~~~~----~~~~~Y~askaal~~~~~~ 161 (167)
T PF00106_consen 131 VNISSIAGVRGS----PGMSAYSASKAALRGLTQS 161 (167)
T ss_dssp EEEEEGGGTSSS----TTBHHHHHHHHHHHHHHHH
T ss_pred EEecchhhccCC----CCChhHHHHHHHHHHHHHH
Confidence 76 665443321 1234555699999887754
No 284
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.35 E-value=1.1 Score=36.88 Aligned_cols=127 Identities=16% Similarity=0.069 Sum_probs=80.5
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-----------------------hhchHHHHHHHHHhCCcc
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-----------------------VEDQFKLIAAIKEVGNIK 56 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-----------------------~~~~~~li~aa~~~g~vk 56 (258)
+....+|++|.+.+.+..+ .+|++++.|+... .--.++++-.+.+.. =-
T Consensus 88 ~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~G 166 (300)
T KOG1201|consen 88 AKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NG 166 (300)
T ss_pred eeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-Cc
Confidence 7788999999887766543 6899999998532 223456666666654 35
Q ss_pred EEEc--CCCCCCCCCCCCCCCCccchhhHHHHHHH-------HHh---CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054 57 RFFP--TEYGSNVDAGHPIEPAKSGYARKAKIRRA-------IEA---EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE 124 (258)
Q Consensus 57 ~~v~--S~~~~~~~~~~~~~~~~~~~~~k~~~e~~-------l~~---~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~ 124 (258)
|+|- |..|-... +...+|..+|+.+.-. +++ .+++.|.+.|+.+-..++.. ..
T Consensus 167 HIV~IaS~aG~~g~-----~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~----------~~ 231 (300)
T KOG1201|consen 167 HIVTIASVAGLFGP-----AGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG----------AT 231 (300)
T ss_pred eEEEehhhhcccCC-----ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC----------CC
Confidence 8886 44443221 2346788899887533 333 36889999886444222111 00
Q ss_pred ceEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
+ -..-.|.+..+-+|+.++.++...
T Consensus 232 ~------~~~l~P~L~p~~va~~Iv~ai~~n 256 (300)
T KOG1201|consen 232 P------FPTLAPLLEPEYVAKRIVEAILTN 256 (300)
T ss_pred C------CccccCCCCHHHHHHHHHHHHHcC
Confidence 1 112356788999999999987654
No 285
>PRK08309 short chain dehydrogenase; Provisional
Probab=94.06 E-value=0.15 Score=38.81 Aligned_cols=51 Identities=25% Similarity=0.337 Sum_probs=41.8
Q ss_pred ceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccchhchHHHHHHHHHhCCcc----EEEc
Q 025054 6 NCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTEVEDQFKLIAAIKEVGNIK----RFFP 60 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk----~~v~ 60 (258)
.+..+.+|+.|.+++.++++ +.|.+|+.+... ..+++..+|++.| |+ +|++
T Consensus 48 ~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~~vh~~---~~~~~~~~~~~~g-v~~~~~~~~h 109 (177)
T PRK08309 48 SITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVAWIHSS---AKDALSVVCRELD-GSSETYRLFH 109 (177)
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEEecccc---chhhHHHHHHHHc-cCCCCceEEE
Confidence 46778899999999888776 357777776654 6889999999999 99 9997
No 286
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=93.96 E-value=0.11 Score=43.60 Aligned_cols=44 Identities=25% Similarity=0.251 Sum_probs=38.4
Q ss_pred EEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhC
Q 025054 9 IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVG 53 (258)
Q Consensus 9 ~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g 53 (258)
++.+|.+|+++|.+-.+.+.+|+||+++.. -...+++.||.++|
T Consensus 66 i~i~D~~n~~Sl~emak~~~vivN~vGPyR-~hGE~VVkacienG 109 (423)
T KOG2733|consen 66 ILIADSANEASLDEMAKQARVIVNCVGPYR-FHGEPVVKACIENG 109 (423)
T ss_pred EEEecCCCHHHHHHHHhhhEEEEeccccce-ecCcHHHHHHHHcC
Confidence 888999999999999999999999999853 34567888888888
No 287
>PRK08303 short chain dehydrogenase; Provisional
Probab=93.56 E-value=0.99 Score=37.59 Aligned_cols=143 Identities=10% Similarity=-0.009 Sum_probs=77.5
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEcc-Cc-------cc----------------hhc----hHHHHHHHHH
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAV-GR-------TE----------------VED----QFKLIAAIKE 51 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~-~~-------~~----------------~~~----~~~li~aa~~ 51 (258)
+..+.+|+.|++++.++++ +.|++||.+ +. .. +.. .+.++...++
T Consensus 69 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~ 148 (305)
T PRK08303 69 GIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIR 148 (305)
T ss_pred eEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhh
Confidence 5678999999988877654 579999988 52 11 111 2233333333
Q ss_pred hCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCC
Q 025054 52 VGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPR 123 (258)
Q Consensus 52 ~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~ 123 (258)
.+ -.++|. |+....... .+......|..+|+.+..+.+. .|+.+..|.||++-..+..............
T Consensus 149 ~~-~g~IV~isS~~~~~~~-~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~ 226 (305)
T PRK08303 149 RP-GGLVVEITDGTAEYNA-THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRD 226 (305)
T ss_pred CC-CcEEEEECCccccccC-cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhh
Confidence 33 246776 553221111 0111133566799998877653 5799999999988654321100000000000
Q ss_pred CceEeccCCCceeeeeccchHHHHHHHHhcCC
Q 025054 124 ENILFYGDGQPKAIFNKEEDIATYTIKAVDDP 155 (258)
Q Consensus 124 ~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~ 155 (258)
.....+ . ..-+...+|+|.+++.++.++
T Consensus 227 ~~~~~p---~-~~~~~~peevA~~v~fL~s~~ 254 (305)
T PRK08303 227 ALAKEP---H-FAISETPRYVGRAVAALAADP 254 (305)
T ss_pred hhcccc---c-cccCCCHHHHHHHHHHHHcCc
Confidence 000001 0 011347899999999998775
No 288
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.89 E-value=1.4 Score=36.54 Aligned_cols=136 Identities=16% Similarity=0.129 Sum_probs=74.0
Q ss_pred eeEEeccCCCHHHHHHhhCC-------CcEEEEccCccc-------------------hhchHHHHHHHH----HhCCcc
Q 025054 7 CLIAQGDLHDHESLVKAIKP-------VDVVISAVGRTE-------------------VEDQFKLIAAIK----EVGNIK 56 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~g-------~d~Vi~~~~~~~-------------------~~~~~~li~aa~----~~g~vk 56 (258)
|.+..+|+.|-++...++++ .|.+|++++..- ..++.+++.++. +..+.-
T Consensus 86 v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g 165 (331)
T KOG1210|consen 86 VSYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLG 165 (331)
T ss_pred eeEeccccccHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCc
Confidence 55778888887777666653 599999998642 334455555443 322123
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHH-------HHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRA-------IEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~-------l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
+++. |+--+... +.....|..+|..+.-+ +...++.+|...|+.+-.+++..-.. . .......+
T Consensus 166 ~I~~vsS~~a~~~----i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~-t---kP~~t~ii 237 (331)
T KOG1210|consen 166 RIILVSSQLAMLG----IYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENK-T---KPEETKII 237 (331)
T ss_pred EEEEehhhhhhcC----cccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccc-c---Cchheeee
Confidence 6665 43222211 12234555566665433 33368889998888777654432000 0 00001112
Q ss_pred ccCCCceeeeeccchHHHHHHHHhcC
Q 025054 129 YGDGQPKAIFNKEEDIATYTIKAVDD 154 (258)
Q Consensus 129 ~g~g~~~~~~v~~~D~a~~~~~~l~~ 154 (258)
-| ++ +.+..+++|.+++.=+..
T Consensus 238 ~g-~s---s~~~~e~~a~~~~~~~~r 259 (331)
T KOG1210|consen 238 EG-GS---SVIKCEEMAKAIVKGMKR 259 (331)
T ss_pred cC-CC---CCcCHHHHHHHHHhHHhh
Confidence 22 22 347889999888875543
No 289
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.42 E-value=2 Score=36.04 Aligned_cols=107 Identities=16% Similarity=0.050 Sum_probs=69.0
Q ss_pred cCceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------------hhchHHHHHHHHHhCCc
Q 025054 4 MINCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------------VEDQFKLIAAIKEVGNI 55 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------------~~~~~~li~aa~~~g~v 55 (258)
...+.+++.|++|.+++++..+ .-|+.|+.||... ...+..|++..+.+. .
T Consensus 85 ~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~ 163 (314)
T KOG1208|consen 85 NQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-P 163 (314)
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-C
Confidence 3456779999999998887654 4699999988532 345577888888876 5
Q ss_pred cEEEc-CCCCC----CCCCCCC-----CCCCccchhhHHHHHHHHHh------CCCCeEEEecCcccccCcC
Q 025054 56 KRFFP-TEYGS----NVDAGHP-----IEPAKSGYARKAKIRRAIEA------EGIPHTYVSCNCSFGFFLP 111 (258)
Q Consensus 56 k~~v~-S~~~~----~~~~~~~-----~~~~~~~~~~k~~~e~~l~~------~~~~~t~lr~~~~~~~~~~ 111 (258)
.|+|. |+... +...... ......|..+|.....+..+ .|+....+.||.+..+.+.
T Consensus 164 ~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~ 235 (314)
T KOG1208|consen 164 SRIVNVSSILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLS 235 (314)
T ss_pred CCEEEEcCccccCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCccccccee
Confidence 78887 65432 1111110 11111255577776444332 2799999999999987443
No 290
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=92.42 E-value=1.8 Score=34.96 Aligned_cols=90 Identities=19% Similarity=0.191 Sum_probs=63.2
Q ss_pred CceeEEeccCCCHHHHHHhhC--CCcEEEEccCccchhchHHHHHHHHHhCCccEEEc--CCCCCCCCCCCCCCCCccch
Q 025054 5 INCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP--TEYGSNVDAGHPIEPAKSGY 80 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~--S~~~~~~~~~~~~~~~~~~~ 80 (258)
.+++++.|-+.|.+.+.+.++ +++.||.++++......+++.+||++.| +..+=+ ..+-.... ....+.
T Consensus 43 ~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPfA~~is~na~~a~~~~~-ipylR~eRp~~~~~~~------~~~~~v 115 (249)
T PF02571_consen 43 PGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPFAAEISQNAIEACRELG-IPYLRFERPSWQPEPD------DNWHYV 115 (249)
T ss_pred CCceEEECCCCCHHHHHHHHHhCCCcEEEECCCchHHHHHHHHHHHHhhcC-cceEEEEcCCcccCCC------CeEEEe
Confidence 457888899989999999996 8999999999988889999999999999 876655 43322111 123344
Q ss_pred hhHHHHHHHHHhCCCCeEEEe
Q 025054 81 ARKAKIRRAIEAEGIPHTYVS 101 (258)
Q Consensus 81 ~~k~~~e~~l~~~~~~~t~lr 101 (258)
.+-.++-+++.+.+-.-+++-
T Consensus 116 ~~~~eA~~~l~~~~~~~iflt 136 (249)
T PF02571_consen 116 DSYEEAAELLKELGGGRIFLT 136 (249)
T ss_pred CCHHHHHHHHhhcCCCCEEEe
Confidence 555555566655443444444
No 291
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=92.18 E-value=0.31 Score=47.21 Aligned_cols=45 Identities=36% Similarity=0.333 Sum_probs=34.3
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhC
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVG 53 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g 53 (258)
+++.+..|+.|.+++.++++++|+|+++++... +..++.+|.++|
T Consensus 628 ~~~~v~lDv~D~e~L~~~v~~~DaVIsalP~~~---H~~VAkaAieaG 672 (1042)
T PLN02819 628 NAEAVQLDVSDSESLLKYVSQVDVVISLLPASC---HAVVAKACIELK 672 (1042)
T ss_pred CCceEEeecCCHHHHHHhhcCCCEEEECCCchh---hHHHHHHHHHcC
Confidence 677899999999999999999999999998742 333444444444
No 292
>PLN00106 malate dehydrogenase
Probab=92.09 E-value=0.27 Score=41.28 Aligned_cols=53 Identities=19% Similarity=0.150 Sum_probs=40.6
Q ss_pred cCCCHHHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc-CCCCCC
Q 025054 13 DLHDHESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP-TEYGSN 66 (258)
Q Consensus 13 D~~d~~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~-S~~~~~ 66 (258)
++.+.+++.++++|+|+||++++... ....+++++++++++ ++.+|. ++-.++
T Consensus 73 ~~~~~~d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD 139 (323)
T PLN00106 73 GFLGDDQLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVN 139 (323)
T ss_pred EEeCCCCHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCcc
Confidence 43344457889999999999998632 567789999999999 999887 554443
No 293
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=91.96 E-value=0.43 Score=38.69 Aligned_cols=55 Identities=20% Similarity=0.200 Sum_probs=43.8
Q ss_pred CceeEEeccCCCHHHHHHhhC--CCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 5 INCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
.|...+..+..|.+++.+.++ +.|+||+++++......+++.+||++.| +..+=+
T Consensus 42 ~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPfA~~is~~a~~a~~~~~-ipylR~ 98 (256)
T TIGR00715 42 HQALTVHTGALDPQELREFLKRHSIDILVDATHPFAAQITTNATAVCKELG-IPYVRF 98 (256)
T ss_pred cCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHHHHHHHHHHHHHHHHhC-CcEEEE
Confidence 334445555667888988886 5899999999988889999999999999 876555
No 294
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=91.81 E-value=0.81 Score=36.15 Aligned_cols=150 Identities=12% Similarity=0.110 Sum_probs=88.5
Q ss_pred CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc---------------hhchHHHHHHHHH-hCCc-cEEEc
Q 025054 5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE---------------VEDQFKLIAAIKE-VGNI-KRFFP 60 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~---------------~~~~~~li~aa~~-~g~v-k~~v~ 60 (258)
..+-+++.|+++..+++++|+ -.|++|+.++..+ +..+...++...+ .|.- --+|-
T Consensus 55 ~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvN 134 (261)
T KOG4169|consen 55 VSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVN 134 (261)
T ss_pred ceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEE
Confidence 457788999999999999887 3599999998643 4556667777654 3212 33444
Q ss_pred --CCCCCCCCCCCCCCCCcc-chhhHHHH---------HHHHHhCCCCeEEEecCcccccCcCCCCC-CCCCCCCCCceE
Q 025054 61 --TEYGSNVDAGHPIEPAKS-GYARKAKI---------RRAIEAEGIPHTYVSCNCSFGFFLPTMAQ-PGATAPPRENIL 127 (258)
Q Consensus 61 --S~~~~~~~~~~~~~~~~~-~~~~k~~~---------e~~l~~~~~~~t~lr~~~~~~~~~~~~~~-~~~~~~~~~~~~ 127 (258)
|..|-++.. ..| |.++|+.+ ..+.+++|+.+..++||.........+.. ..+..... .
T Consensus 135 msSv~GL~P~p------~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~---~ 205 (261)
T KOG4169|consen 135 MSSVAGLDPMP------VFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSD---S 205 (261)
T ss_pred eccccccCccc------cchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccH---H
Confidence 555655432 233 44477654 45666789999999999877644433211 00000000 0
Q ss_pred eccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEc
Q 025054 128 FYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLR 165 (258)
Q Consensus 128 ~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~ 165 (258)
+.+. -.+.+--+..+++.-++.+++.++ .|.++-+.
T Consensus 206 ~~~~-l~~~~~q~~~~~a~~~v~aiE~~~-NGaiw~v~ 241 (261)
T KOG4169|consen 206 IKEA-LERAPKQSPACCAINIVNAIEYPK-NGAIWKVD 241 (261)
T ss_pred HHHH-HHHcccCCHHHHHHHHHHHHhhcc-CCcEEEEe
Confidence 0000 011223467788999999998862 33344443
No 295
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=91.11 E-value=0.8 Score=36.94 Aligned_cols=56 Identities=20% Similarity=0.210 Sum_probs=49.0
Q ss_pred cCceeEEeccCCCHHHHHHhhC--CCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 4 MINCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
..++.+..|-+.|.+.+.+.++ +.+.||.++++......+++.+||++.| +..+=+
T Consensus 41 ~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~~is~~a~~ac~~~~-ipyiR~ 98 (248)
T PRK08057 41 DLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYAAQISANAAAACRALG-IPYLRL 98 (248)
T ss_pred cCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccHHHHHHHHHHHHHHhC-CcEEEE
Confidence 3567888899989999999997 7899999999988899999999999999 876554
No 296
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=90.63 E-value=2 Score=35.86 Aligned_cols=82 Identities=9% Similarity=-0.034 Sum_probs=47.1
Q ss_pred cchhhHHHHHHHHHh--------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCce-eeeeccchHHHHH
Q 025054 78 SGYARKAKIRRAIEA--------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPK-AIFNKEEDIATYT 148 (258)
Q Consensus 78 ~~~~~k~~~e~~l~~--------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-~~~v~~~D~a~~~ 148 (258)
.|..+|+.++.+.+. .++.+..|.||++-..+...+.. . . ........ +.+ ..+...+|++.++
T Consensus 192 ~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~---~--~-~~~~~~~~-~~pl~r~~~peevA~~~ 264 (303)
T PLN02730 192 GMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGF---I--D-DMIEYSYA-NAPLQKELTADEVGNAA 264 (303)
T ss_pred hhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccc---c--H-HHHHHHHh-cCCCCCCcCHHHHHHHH
Confidence 466799999876642 36889999999886654322100 0 0 00000000 001 1246789999999
Q ss_pred HHHhcCCC--CCCceEEEcC
Q 025054 149 IKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 149 ~~~l~~~~--~~~~~~~l~g 166 (258)
+.++.... ..|+.+.+-|
T Consensus 265 ~fLaS~~a~~itG~~l~vdG 284 (303)
T PLN02730 265 AFLASPLASAITGATIYVDN 284 (303)
T ss_pred HHHhCccccCccCCEEEECC
Confidence 99987542 2456666643
No 297
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=89.76 E-value=3.2 Score=34.50 Aligned_cols=83 Identities=16% Similarity=0.071 Sum_probs=47.2
Q ss_pred cchhhHHHHHHHHHh--------CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEeccCCCceeeeeccchHHHHHH
Q 025054 78 SGYARKAKIRRAIEA--------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYGDGQPKAIFNKEEDIATYTI 149 (258)
Q Consensus 78 ~~~~~k~~~e~~l~~--------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~v~~~D~a~~~~ 149 (258)
.|..+|+.++.+.+. .|+.+..|.||.+...+...+... . ..............+...+|+++++.
T Consensus 191 ~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~-----~-~~~~~~~~~~p~~r~~~peevA~~v~ 264 (299)
T PRK06300 191 GMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFI-----E-RMVDYYQDWAPLPEPMEAEQVGAAAA 264 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccccc-----H-HHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 466799999766542 379999999998876543211000 0 00000000000012457899999999
Q ss_pred HHhcCCC--CCCceEEEcC
Q 025054 150 KAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 150 ~~l~~~~--~~~~~~~l~g 166 (258)
.++.... ..|+.+.+.|
T Consensus 265 ~L~s~~~~~itG~~i~vdG 283 (299)
T PRK06300 265 FLVSPLASAITGETLYVDH 283 (299)
T ss_pred HHhCccccCCCCCEEEECC
Confidence 9887642 2466666654
No 298
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=89.02 E-value=1 Score=31.28 Aligned_cols=55 Identities=22% Similarity=0.255 Sum_probs=38.3
Q ss_pred ccCceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhCCccEEE
Q 025054 3 YMINCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFF 59 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v 59 (258)
.+.|+.++.||.+|++.|.++ +++++.|+.+.... .....++..+++.+...+++
T Consensus 38 ~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d--~~n~~~~~~~r~~~~~~~ii 93 (116)
T PF02254_consen 38 REEGVEVIYGDATDPEVLERAGIEKADAVVILTDDD--EENLLIALLARELNPDIRII 93 (116)
T ss_dssp HHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSH--HHHHHHHHHHHHHTTTSEEE
T ss_pred HhcccccccccchhhhHHhhcCccccCEEEEccCCH--HHHHHHHHHHHHHCCCCeEE
Confidence 457899999999999999986 67899999887754 24445556666643133444
No 299
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=88.37 E-value=6.7 Score=31.20 Aligned_cols=94 Identities=20% Similarity=0.231 Sum_probs=58.0
Q ss_pred ceeEEeccCCC-HHHHHHhhC-------CCcEEEEccCcc----c----------------hhchHHHHHHHHHhCCcc-
Q 025054 6 NCLIAQGDLHD-HESLVKAIK-------PVDVVISAVGRT----E----------------VEDQFKLIAAIKEVGNIK- 56 (258)
Q Consensus 6 gv~~~~~D~~d-~~~l~~al~-------g~d~Vi~~~~~~----~----------------~~~~~~li~aa~~~g~vk- 56 (258)
.+.....|+++ .+++..+++ +.|++++.++.. . +.+...+..++... .+
T Consensus 58 ~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~ 135 (251)
T COG1028 58 RAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPL--MKK 135 (251)
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHh--hhh
Confidence 45677799998 777666554 489999999852 1 12223333322221 22
Q ss_pred -EEEc-CCCCCCCCCCCCCCC-CccchhhHHHHHHHHHh-------CCCCeEEEecCccc
Q 025054 57 -RFFP-TEYGSNVDAGHPIEP-AKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSF 106 (258)
Q Consensus 57 -~~v~-S~~~~~~~~~~~~~~-~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~ 106 (258)
++|. |+.... ... + ...|..+|+.++.+.+. .|+..+.|.||.+-
T Consensus 136 ~~Iv~isS~~~~-~~~----~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 136 QRIVNISSVAGL-GGP----PGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred CeEEEECCchhc-CCC----CCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 7776 666543 221 2 25677799998765532 57999999999444
No 300
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=87.03 E-value=6.2 Score=30.59 Aligned_cols=147 Identities=12% Similarity=0.064 Sum_probs=77.8
Q ss_pred eeEEeccCCCHHHHHHhhC-------CCcEEEEccCccc-------------------hhch----HHHHHHHHHhCCcc
Q 025054 7 CLIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE-------------------VEDQ----FKLIAAIKEVGNIK 56 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~-------------------~~~~----~~li~aa~~~g~vk 56 (258)
.....+|+.+..+.+..|+ ..+++++|++... +.+. +..+++....+ ..
T Consensus 64 h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~-~~ 142 (256)
T KOG1200|consen 64 HSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQ-QQ 142 (256)
T ss_pred cceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhc-CC
Confidence 4567788887776655443 4699999999753 2222 33333322223 23
Q ss_pred --EEEc-CCCCCCCCCCCCCCCCccchhhHHH-------HHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCCCCCce
Q 025054 57 --RFFP-TEYGSNVDAGHPIEPAKSGYARKAK-------IRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENI 126 (258)
Q Consensus 57 --~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~-------~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
.+|- |+.-.-.... ....|..+|.- +-+.+...++.+-.+.||++-.+....+.. .. ..+..
T Consensus 143 ~~sIiNvsSIVGkiGN~----GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~-~v---~~ki~ 214 (256)
T KOG1200|consen 143 GLSIINVSSIVGKIGNF----GQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPP-KV---LDKIL 214 (256)
T ss_pred CceEEeehhhhcccccc----cchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCH-HH---HHHHH
Confidence 6776 5532211111 12334444433 233444468999999999887765433211 00 00001
Q ss_pred EeccCCCceeeeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054 127 LFYGDGQPKAIFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP 166 (258)
Q Consensus 127 ~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g 166 (258)
..+.-| -+=..+|+|..+..+..+.. . .|..+.+.|
T Consensus 215 ~~iPmg----r~G~~EevA~~V~fLAS~~ssYiTG~t~evtG 252 (256)
T KOG1200|consen 215 GMIPMG----RLGEAEEVANLVLFLASDASSYITGTTLEVTG 252 (256)
T ss_pred ccCCcc----ccCCHHHHHHHHHHHhccccccccceeEEEec
Confidence 111111 14467899999888875543 2 366677764
No 301
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=82.89 E-value=3.8 Score=32.92 Aligned_cols=51 Identities=22% Similarity=0.238 Sum_probs=43.9
Q ss_pred EEeccCCCHHHHHHhhC--CCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 9 IAQGDLHDHESLVKAIK--PVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 9 ~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
.+.+-.-+.+.|.+.++ ++|.||.+.++......+|.+++|++.| +..+-+
T Consensus 47 ~~~~G~l~~e~l~~~l~e~~i~llIDATHPyAa~iS~Na~~aake~g-ipy~r~ 99 (257)
T COG2099 47 VRVGGFLGAEGLAAFLREEGIDLLIDATHPYAARISQNAARAAKETG-IPYLRL 99 (257)
T ss_pred eeecCcCCHHHHHHHHHHcCCCEEEECCChHHHHHHHHHHHHHHHhC-CcEEEE
Confidence 45555668888888886 7899999999988899999999999999 988776
No 302
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=79.54 E-value=33 Score=28.10 Aligned_cols=155 Identities=12% Similarity=0.062 Sum_probs=82.5
Q ss_pred ceeEEeccCCCHHHHHHhh--------CCCcEEEEccCccc--------------------hh-chHHHHHHHH----Hh
Q 025054 6 NCLIAQGDLHDHESLVKAI--------KPVDVVISAVGRTE--------------------VE-DQFKLIAAIK----EV 52 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al--------~g~d~Vi~~~~~~~--------------------~~-~~~~li~aa~----~~ 52 (258)
.+..+.+|+.+.+...+++ .+.|++++.++... +. ....+..+|. +.
T Consensus 61 ~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~ 140 (270)
T KOG0725|consen 61 KVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKS 140 (270)
T ss_pred eeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhc
Confidence 3677889998765444432 35899999987532 22 2333334443 22
Q ss_pred CCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccCcCCCCCCCCCCCCCC
Q 025054 53 GNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRE 124 (258)
Q Consensus 53 g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~ 124 (258)
+ -..++. |+.+...... .....|..+|+.++++.|. .|+.+-.|-||.+...+ ..............
T Consensus 141 ~-gg~I~~~ss~~~~~~~~---~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~-~~~~~~~~~~~~~~ 215 (270)
T KOG0725|consen 141 K-GGSIVNISSVAGVGPGP---GSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL-RAAGLDDGEMEEFK 215 (270)
T ss_pred C-CceEEEEeccccccCCC---CCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc-cccccccchhhHHh
Confidence 3 346776 4443322211 1124566699999988875 58999999999888876 21110000000000
Q ss_pred ceEeccCCCcee-eeeccchHHHHHHHHhcCCC-C-CCceEEEcC
Q 025054 125 NILFYGDGQPKA-IFNKEEDIATYTIKAVDDPR-T-LNKTLYLRP 166 (258)
Q Consensus 125 ~~~~~g~g~~~~-~~v~~~D~a~~~~~~l~~~~-~-~~~~~~l~g 166 (258)
...... ...+. -+-..+|++..++.++.+.. . .|+.+.+-|
T Consensus 216 ~~~~~~-~~~p~gr~g~~~eva~~~~fla~~~asyitG~~i~vdg 259 (270)
T KOG0725|consen 216 EATDSK-GAVPLGRVGTPEEVAEAAAFLASDDASYITGQTIIVDG 259 (270)
T ss_pred hhhccc-cccccCCccCHHHHHHhHHhhcCcccccccCCEEEEeC
Confidence 000000 00011 24578899999988877642 2 355555543
No 303
>PF12683 DUF3798: Protein of unknown function (DUF3798); InterPro: IPR024258 This entry represents functionally uncharacterised proteins that are found in bacteria. They are typically between 247 and 417 amino acids in length. Most of the proteins in this entry have an N-terminal lipoprotein attachment site. These proteins have distant similarity to periplasmic ligand binding families suggesting that this family has a similar role.; PDB: 3QI7_A.
Probab=77.27 E-value=14 Score=30.01 Aligned_cols=53 Identities=21% Similarity=0.255 Sum_probs=34.2
Q ss_pred hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCCccc---hhhHHHHHHHHHhCCCCeEEEecC
Q 025054 39 VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKSG---YARKAKIRRAIEAEGIPHTYVSCN 103 (258)
Q Consensus 39 ~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~---~~~k~~~e~~l~~~~~~~t~lr~~ 103 (258)
....+.++.+|++-| .|.||+ |. .- +..| ...+..+|+...+.|++|+.+...
T Consensus 116 ~~~G~~i~~~Ak~mG-AktFVh~sf-pr----------hms~~~l~~Rr~~M~~~C~~lGi~fv~~taP 172 (275)
T PF12683_consen 116 ISRGYTIVWAAKKMG-AKTFVHYSF-PR----------HMSYELLARRRDIMEEACKDLGIKFVEVTAP 172 (275)
T ss_dssp HHHHHHHHHHHHHTT--S-EEEEEE-TT----------GGGSHHHHHHHHHHHHHHHHCT--EEEEEE-
T ss_pred hhccHHHHHHHHHcC-CceEEEEec-hh----------hcchHHHHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 567899999999999 999999 53 21 2222 234555677777799999988654
No 304
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=77.12 E-value=9 Score=30.50 Aligned_cols=147 Identities=14% Similarity=0.112 Sum_probs=76.0
Q ss_pred eEEeccCCCHHHHHHhhC-------CCcEEEEccCccc--------------------hhchHHHHHHHHHhCC----cc
Q 025054 8 LIAQGDLHDHESLVKAIK-------PVDVVISAVGRTE--------------------VEDQFKLIAAIKEVGN----IK 56 (258)
Q Consensus 8 ~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~g~----vk 56 (258)
-++.+|+++.+++.+.|. +.|.++|+.++.+ -.....++..|+++.. =-
T Consensus 59 ~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~gg 138 (259)
T COG0623 59 LVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGG 138 (259)
T ss_pred eEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCC
Confidence 468999999888888776 4699999998754 1122344444444320 01
Q ss_pred EEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH---h----CCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEe
Q 025054 57 RFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE---A----EGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILF 128 (258)
Q Consensus 57 ~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---~----~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (258)
-+|- |-+|...- .|..+-..-.|+..|.-+| . .|+++-.|-.|.+-.--...+..+. +.+..
T Consensus 139 SiltLtYlgs~r~----vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~------~~l~~ 208 (259)
T COG0623 139 SILTLTYLGSERV----VPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFR------KMLKE 208 (259)
T ss_pred cEEEEEeccceee----cCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHH------HHHHH
Confidence 2332 43444221 1112323347888775443 2 4666666665543321111111110 00000
Q ss_pred ccCCCce-eeeeccchHHHHHHHHhcCC--CCCCceEEEc
Q 025054 129 YGDGQPK-AIFNKEEDIATYTIKAVDDP--RTLNKTLYLR 165 (258)
Q Consensus 129 ~g~g~~~-~~~v~~~D~a~~~~~~l~~~--~~~~~~~~l~ 165 (258)
..-..+ ..-++.+||+...+.++++- .-.|++.++-
T Consensus 209 -~e~~aPl~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD 247 (259)
T COG0623 209 -NEANAPLRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVD 247 (259)
T ss_pred -HHhhCCccCCCCHHHhhhhHHHHhcchhcccccceEEEc
Confidence 111111 12357999999999998874 2356776664
No 305
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=76.15 E-value=9 Score=32.74 Aligned_cols=63 Identities=17% Similarity=0.233 Sum_probs=47.5
Q ss_pred cccCceeEEeccCCCHHHHHHhhCCC-cEEEE-ccCcc--chhchHHHHHHHHHhCCccEEEcCCCCC
Q 025054 2 LYMINCLIAQGDLHDHESLVKAIKPV-DVVIS-AVGRT--EVEDQFKLIAAIKEVGNIKRFFPTEYGS 65 (258)
Q Consensus 2 l~~~gv~~~~~D~~d~~~l~~al~g~-d~Vi~-~~~~~--~~~~~~~li~aa~~~g~vk~~v~S~~~~ 65 (258)
|+..|+++.-+|-+|+++++++++.- ..||. +.+.+ .+.-...+.+.|+++| +.-+|-++++.
T Consensus 122 l~~~Gi~v~fvd~~d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~g-vpliVDNT~at 188 (426)
T COG2873 122 LKRLGIEVRFVDPDDPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHG-VPLIVDNTFAT 188 (426)
T ss_pred HHhcCcEEEEeCCCCHHHHHHHhCcccceEEEEeccCCCccccCHHHHHHHHHHcC-CcEEEecCCCc
Confidence 56789999999999999999999864 44542 22222 2666788999999999 99888766543
No 306
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=75.56 E-value=29 Score=27.30 Aligned_cols=33 Identities=18% Similarity=0.248 Sum_probs=22.6
Q ss_pred CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc
Q 025054 5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT 37 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~ 37 (258)
++..-..+|+.|.+++++..+ ..+++|+++|..
T Consensus 50 p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIq 89 (245)
T COG3967 50 PEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQ 89 (245)
T ss_pred cchheeeecccchhhHHHHHHHHHhhCCchheeeeccccc
Confidence 345556788888775554332 469999999864
No 307
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=75.34 E-value=14 Score=24.89 Aligned_cols=56 Identities=20% Similarity=0.172 Sum_probs=36.9
Q ss_pred ccCceeEEec---cCCCHH--HHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 3 YMINCLIAQG---DLHDHE--SLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 3 ~~~gv~~~~~---D~~d~~--~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
++.|.+.+.- +-.... .+...++.+|.||.++..-.=.....+-++|++.+ + .+++
T Consensus 20 ~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~-i-p~~~ 80 (97)
T PF10087_consen 20 EKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYG-I-PIIY 80 (97)
T ss_pred HHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcC-C-cEEE
Confidence 4456655544 222233 48889999999998887654345667778888888 4 4554
No 308
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=75.07 E-value=12 Score=27.38 Aligned_cols=57 Identities=21% Similarity=0.301 Sum_probs=35.2
Q ss_pred cccCceeEEeccCC-CHH-HHHHhhC-CCcEE-EEccCccchhchHHHHHHHHHhCCccEEE
Q 025054 2 LYMINCLIAQGDLH-DHE-SLVKAIK-PVDVV-ISAVGRTEVEDQFKLIAAIKEVGNIKRFF 59 (258)
Q Consensus 2 l~~~gv~~~~~D~~-d~~-~l~~al~-g~d~V-i~~~~~~~~~~~~~li~aa~~~g~vk~~v 59 (258)
|++.|.+++..-+. .++ ....|++ ++|+| ++............+++++++.| ++++.
T Consensus 36 l~d~GfeVi~~g~~~tp~e~v~aA~~~dv~vIgvSsl~g~h~~l~~~lve~lre~G-~~~i~ 96 (143)
T COG2185 36 LADAGFEVINLGLFQTPEEAVRAAVEEDVDVIGVSSLDGGHLTLVPGLVEALREAG-VEDIL 96 (143)
T ss_pred HHhCCceEEecCCcCCHHHHHHHHHhcCCCEEEEEeccchHHHHHHHHHHHHHHhC-CcceE
Confidence 45667777766543 343 3444444 67766 34333334666777888888888 77766
No 309
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=74.76 E-value=11 Score=29.94 Aligned_cols=53 Identities=30% Similarity=0.446 Sum_probs=40.1
Q ss_pred CceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHH-HHhCCccEEEc
Q 025054 5 INCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAI-KEVGNIKRFFP 60 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa-~~~g~vk~~v~ 60 (258)
.+..++.+|-+|++.|.+| +.++|+++.+++... ...-++..| ++.| +++++.
T Consensus 44 ~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~--~N~i~~~la~~~~g-v~~via 98 (225)
T COG0569 44 LDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE--VNSVLALLALKEFG-VPRVIA 98 (225)
T ss_pred cceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH--HHHHHHHHHHHhcC-CCcEEE
Confidence 5688999999999999999 889999999888653 222233334 3468 999885
No 310
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=72.64 E-value=5.4 Score=33.50 Aligned_cols=32 Identities=22% Similarity=0.074 Sum_probs=25.0
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCcc
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRT 37 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~ 37 (258)
|-+....++.+++.+.+.+.++++|+||+++.
T Consensus 51 G~~~~~~p~~~p~~~~~~~~~~~VVlncvGPy 82 (382)
T COG3268 51 GPEAAVFPLGVPAALEAMASRTQVVLNCVGPY 82 (382)
T ss_pred CccccccCCCCHHHHHHHHhcceEEEeccccc
Confidence 33444455556889999999999999999974
No 311
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=71.14 E-value=14 Score=32.65 Aligned_cols=60 Identities=15% Similarity=0.099 Sum_probs=43.0
Q ss_pred ccCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
...|+++...|.+|++.+.++++.-..+|.+..+.+ +.-...|.+.|++.| +.-++-+++
T Consensus 125 ~~~Gi~v~~vd~~d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~g-i~livD~t~ 188 (433)
T PRK08134 125 RRFGIETTFVKPGDIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAG-VPLLVDSTF 188 (433)
T ss_pred hhCCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcC-CEEEEECCC
Confidence 457999999999999999999975444433333332 345678899999998 887775444
No 312
>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein. Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.
Probab=70.20 E-value=11 Score=34.53 Aligned_cols=54 Identities=30% Similarity=0.436 Sum_probs=43.5
Q ss_pred CceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
+++.+...|.++.+++.+.|++.|.|++++..........+-.+|.+.| +.+++
T Consensus 183 ~~v~v~~i~~~~~~dl~ev~~~~DiVi~vsDdy~~~~Lr~lN~acvkeg--k~~IP 236 (637)
T TIGR03693 183 DALLVQEIDFAEDQHLHEAFEPADWVLYVSDNGDIDDLHALHAFCKEEG--KGFIP 236 (637)
T ss_pred CCCceEeccCCcchhHHHhhcCCcEEEEECCCCChHHHHHHHHHHHHcC--CCeEE
Confidence 4667777777788899999999999999998766667888888999888 44443
No 313
>PRK05086 malate dehydrogenase; Provisional
Probab=69.31 E-value=8 Score=32.40 Aligned_cols=42 Identities=19% Similarity=0.193 Sum_probs=33.9
Q ss_pred HHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEEc
Q 025054 18 ESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 18 ~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v~ 60 (258)
+++.++++++|+||.+++... ....+++++++++.+ .+++|.
T Consensus 61 ~d~~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~ivi 115 (312)
T PRK05086 61 EDPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIG 115 (312)
T ss_pred CCHHHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEE
Confidence 355678899999999998632 346788999999998 998886
No 314
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=68.84 E-value=11 Score=29.03 Aligned_cols=48 Identities=31% Similarity=0.493 Sum_probs=33.0
Q ss_pred cCceeEEec-cCCCHHHHHHhhC-----CCcEEEEccCccc----hhchHHHHHHHHH
Q 025054 4 MINCLIAQG-DLHDHESLVKAIK-----PVDVVISAVGRTE----VEDQFKLIAAIKE 51 (258)
Q Consensus 4 ~~gv~~~~~-D~~d~~~l~~al~-----g~d~Vi~~~~~~~----~~~~~~li~aa~~ 51 (258)
..|+.++++ |++|++...+.++ .+|+|++-..+.. ..-+..+++.|..
T Consensus 108 ~~Ga~~i~~~dvtdp~~~~ki~e~lp~r~VdvVlSDMapnaTGvr~~Dh~~~i~LC~s 165 (232)
T KOG4589|consen 108 PEGATIIQGNDVTDPETYRKIFEALPNRPVDVVLSDMAPNATGVRIRDHYRSIELCDS 165 (232)
T ss_pred CCCcccccccccCCHHHHHHHHHhCCCCcccEEEeccCCCCcCcchhhHHHHHHHHHH
Confidence 468889988 9999987776665 5899987665532 3445555565543
No 315
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=67.37 E-value=64 Score=25.92 Aligned_cols=100 Identities=15% Similarity=0.217 Sum_probs=61.8
Q ss_pred HHHHHHHHHhCCccEEEcCCCCCCCCCCCCCCCCccchh-hHHHHHHHHHhCCCCeEEEecCcccccCcCCCCCCCCCCC
Q 025054 43 FKLIAAIKEVGNIKRFFPTEYGSNVDAGHPIEPAKSGYA-RKAKIRRAIEAEGIPHTYVSCNCSFGFFLPTMAQPGATAP 121 (258)
Q Consensus 43 ~~li~aa~~~g~vk~~v~S~~~~~~~~~~~~~~~~~~~~-~k~~~e~~l~~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~ 121 (258)
..+++|.++.| +||+-. ..||-. ....+.+++++.|+.++.++. ++ .
T Consensus 109 ~A~~~AL~alg-~~RIal---------------vTPY~~~v~~~~~~~l~~~G~eV~~~~~---~~-------------~ 156 (239)
T TIGR02990 109 SAAVDGLAALG-VRRISL---------------LTPYTPETSRPMAQYFAVRGFEIVNFTC---LG-------------L 156 (239)
T ss_pred HHHHHHHHHcC-CCEEEE---------------ECCCcHHHHHHHHHHHHhCCcEEeeeec---cC-------------C
Confidence 45555555555 555544 123433 345667778888888776652 01 0
Q ss_pred CCCceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcc
Q 025054 122 PRENILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTL 188 (258)
Q Consensus 122 ~~~~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~ 188 (258)
..+..+.-++.+.+.+++..+. .+ .-..+.+++ ..+..-++++.+++.+|+|+
T Consensus 157 ---------~~~~~ia~i~p~~i~~~~~~~~-~~--~aDAifisC--TnLrt~~vi~~lE~~lGkPV 209 (239)
T TIGR02990 157 ---------TDDREMARISPDCIVEAALAAF-DP--DADALFLSC--TALRAATCAQRIEQAIGKPV 209 (239)
T ss_pred ---------CCCceeeecCHHHHHHHHHHhc-CC--CCCEEEEeC--CCchhHHHHHHHHHHHCCCE
Confidence 0122344577788887777663 33 334566653 47888899999999999886
No 316
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=66.58 E-value=37 Score=26.92 Aligned_cols=99 Identities=13% Similarity=-0.021 Sum_probs=58.4
Q ss_pred cCceeEEeccCCCHHHHHHhhC--------CCcEEEEccCccc-------------------hhc----hHHHHHHHHHh
Q 025054 4 MINCLIAQGDLHDHESLVKAIK--------PVDVVISAVGRTE-------------------VED----QFKLIAAIKEV 52 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~--------g~d~Vi~~~~~~~-------------------~~~----~~~li~aa~~~ 52 (258)
+.|....+.|+++++++.+..+ ..|.+++.++..- +-+ .+.+..-..++
T Consensus 51 ~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika 130 (289)
T KOG1209|consen 51 QFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA 130 (289)
T ss_pred hhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc
Confidence 5678899999999998887665 2488888887531 112 22232222222
Q ss_pred CCccEEEc-CCC-CCCCCCCCCCCCCccchhhHHHHHHHHHh-------CCCCeEEEecCcccccC
Q 025054 53 GNIKRFFP-TEY-GSNVDAGHPIEPAKSGYARKAKIRRAIEA-------EGIPHTYVSCNCSFGFF 109 (258)
Q Consensus 53 g~vk~~v~-S~~-~~~~~~~~~~~~~~~~~~~k~~~e~~l~~-------~~~~~t~lr~~~~~~~~ 109 (258)
+ ..+|. .++ +..+- +...-|.++|+.+-.|-+. -|++++-+-+|.+-.+.
T Consensus 131 K--GtIVnvgSl~~~vpf-----pf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~I 189 (289)
T KOG1209|consen 131 K--GTIVNVGSLAGVVPF-----PFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDI 189 (289)
T ss_pred c--ceEEEecceeEEecc-----chhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceeccc
Confidence 2 23554 332 22211 1234466799999888765 26777777776665544
No 317
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=65.07 E-value=25 Score=30.47 Aligned_cols=64 Identities=20% Similarity=0.216 Sum_probs=42.6
Q ss_pred cccCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----hhchHHHHHHHHHhCCccEEEcCCCCC
Q 025054 2 LYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----VEDQFKLIAAIKEVGNIKRFFPTEYGS 65 (258)
Q Consensus 2 l~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----~~~~~~li~aa~~~g~vk~~v~S~~~~ 65 (258)
+...|+++...|..|.+.+.++++.-..+|.+=.+.+ +.--..+.+.|++.|.+.-+|-++++.
T Consensus 115 l~~~gv~v~~~d~~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~at 182 (386)
T PF01053_consen 115 LPRFGVEVTFVDPTDLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFAT 182 (386)
T ss_dssp HHHTTSEEEEESTTSHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTH
T ss_pred hcccCcEEEEeCchhHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccc
Confidence 4457999999999999999999996544444443333 556678888888885255555465543
No 318
>cd03362 TOPRIM_TopoIA_TopoIII TOPRIM_TopoIA_TopoIII: The topoisomerase-primase (TORPIM) domain found in members of the type IA family of DNA topoisomerases (Topo IA) similar to topoisomerase III. Type IA DNA topoisomerases remove (relax) negative supercoils in the DNA by: cleaving one strand of the DNA duplex, covalently linking to the 5' phosphoryl end of the DNA break and, allowing the other strand of the duplex to pass through the gap. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). For topoisomerases the conserved glutamate is believed to act as a general base in strand joining and, as a general acid in strand cleavage. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function.
Probab=64.71 E-value=13 Score=27.41 Aligned_cols=46 Identities=17% Similarity=0.097 Sum_probs=33.0
Q ss_pred HHHHHhhCCCcEEEEccCccc--hhchHHHHHHHHH--hCCccEEEcCCC
Q 025054 18 ESLVKAIKPVDVVISAVGRTE--VEDQFKLIAAIKE--VGNIKRFFPTEY 63 (258)
Q Consensus 18 ~~l~~al~g~d~Vi~~~~~~~--~~~~~~li~aa~~--~g~vk~~v~S~~ 63 (258)
..|.+.++++|.||++..++. -.....+++.+.. ...++|..+|++
T Consensus 90 ~~ik~l~~~ad~ii~atD~DrEGE~I~~~i~~~~~~~~~~~v~R~~fssl 139 (151)
T cd03362 90 KVLKKLAKRADEIVIATDADREGELIGREILEYAKCVKRKPVKRAWFSSL 139 (151)
T ss_pred HHHHHHHhCCCeEEEccCCCccccHHHHHHHHHhCCCCCCcEEEEEEccC
Confidence 466777789999999988764 3345577777775 344888888663
No 319
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=63.16 E-value=19 Score=25.89 Aligned_cols=44 Identities=20% Similarity=0.121 Sum_probs=31.2
Q ss_pred CHHHHHHhhC--CCcEEEEccCccc-----------------hhchHHHHHHHHHhCCccEEEc
Q 025054 16 DHESLVKAIK--PVDVVISAVGRTE-----------------VEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 16 d~~~l~~al~--g~d~Vi~~~~~~~-----------------~~~~~~li~aa~~~g~vk~~v~ 60 (258)
|++.+.+.++ ++|.|...+.... .+....+++||++.| ++-+++
T Consensus 1 D~~~~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~hp~L~~Dllge~v~a~h~~G-irv~ay 63 (132)
T PF14871_consen 1 DPEQFVDTLKEAHVNSITIFAKCHGGYAYYPTKVGPRHPGLKRDLLGEQVEACHERG-IRVPAY 63 (132)
T ss_pred CHHHHHHHHHHhCCCEEEEEcccccEEEEccCCCCcCCCCCCcCHHHHHHHHHHHCC-CEEEEE
Confidence 5666677666 6787765443211 355678999999999 998887
No 320
>PRK05939 hypothetical protein; Provisional
Probab=60.51 E-value=26 Score=30.46 Aligned_cols=60 Identities=17% Similarity=0.147 Sum_probs=41.1
Q ss_pred ccCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
+..|+++...|..|.+.+.+++..-..++.+..+.+ +.....|.+.|++.| +.-++-.++
T Consensus 107 ~~~G~~v~~v~~~d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~g-i~livD~t~ 170 (397)
T PRK05939 107 RGLGVEVTMVDATDVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERG-LLYVVDNTM 170 (397)
T ss_pred HhcCCEEEEECCCCHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcC-CEEEEECCc
Confidence 346889999999999999999975443333333322 445678889999988 765554443
No 321
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=60.45 E-value=38 Score=24.06 Aligned_cols=55 Identities=18% Similarity=0.215 Sum_probs=38.5
Q ss_pred ceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEcCCCCCC
Q 025054 6 NCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSN 66 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S~~~~~ 66 (258)
|+++...+-.+.+.+.+.++++|+++..... .....+++++ .+ +|.+...+.|.+
T Consensus 18 ~~~v~~~~~~~~~~~~~~l~~~d~ii~~~~~---~~~~~~l~~~--~~-Lk~I~~~~~G~d 72 (133)
T PF00389_consen 18 GFEVEFCDSPSEEELAERLKDADAIIVGSGT---PLTAEVLEAA--PN-LKLISTAGAGVD 72 (133)
T ss_dssp TSEEEEESSSSHHHHHHHHTTESEEEESTTS---TBSHHHHHHH--TT--SEEEESSSSCT
T ss_pred CceEEEeCCCCHHHHHHHhCCCeEEEEcCCC---CcCHHHHhcc--ce-eEEEEEcccccC
Confidence 4566666667888999999999999865443 2467788887 34 777776555554
No 322
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=60.34 E-value=11 Score=31.82 Aligned_cols=36 Identities=22% Similarity=0.080 Sum_probs=26.0
Q ss_pred HHHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHh
Q 025054 17 HESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEV 52 (258)
Q Consensus 17 ~~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~ 52 (258)
..++.++++|+|+|||+++... +...+.++...+++
T Consensus 69 ~~~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 69 TTDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred cCCHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567789999999999998643 33345666666665
No 323
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=60.08 E-value=12 Score=28.65 Aligned_cols=30 Identities=27% Similarity=0.205 Sum_probs=18.1
Q ss_pred eeEEeccCCCHHHHHHhhCCCcEEEEccCc
Q 025054 7 CLIAQGDLHDHESLVKAIKPVDVVISAVGR 36 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~g~d~Vi~~~~~ 36 (258)
.++...|..+.+++.++++++|+||++++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~diVi~at~~ 107 (194)
T cd01078 78 EGVGAVETSDDAARAAAIKGADVVFAAGAA 107 (194)
T ss_pred CcEEEeeCCCHHHHHHHHhcCCEEEECCCC
Confidence 344455666666666666666766666543
No 324
>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]
Probab=59.64 E-value=16 Score=31.53 Aligned_cols=54 Identities=28% Similarity=0.274 Sum_probs=40.0
Q ss_pred CceeEEeccCCCHH-HHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEcCCC
Q 025054 5 INCLIAQGDLHDHE-SLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 5 ~gv~~~~~D~~d~~-~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
.+++.+..|+.|++ .|.+..+..|.|+++.+... ...+..+|+.. .++.+.|+|
T Consensus 46 ~~~~av~ldv~~~~~~L~~~v~~~D~viSLlP~t~---h~lVaK~~i~~--~~~~vtsSy 100 (445)
T KOG0172|consen 46 INIKAVSLDVADEELALRKEVKPLDLVISLLPYTF---HPLVAKGCIIT--KEDSVTSSY 100 (445)
T ss_pred CCccceEEEccchHHHHHhhhcccceeeeeccchh---hHHHHHHHHHh--hcccccccc
Confidence 56888999999988 99999999999999988652 34455555554 366665554
No 325
>PRK08114 cystathionine beta-lyase; Provisional
Probab=58.94 E-value=34 Score=29.78 Aligned_cols=62 Identities=18% Similarity=0.168 Sum_probs=43.4
Q ss_pred cccCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----hhchHHHHHHHHHhC-CccEEEcCCC
Q 025054 2 LYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----VEDQFKLIAAIKEVG-NIKRFFPTEY 63 (258)
Q Consensus 2 l~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----~~~~~~li~aa~~~g-~vk~~v~S~~ 63 (258)
|+..|+++...|..|.+.++++++.-..++.+-.+.+ +.-...+.+.|++.| .+.-+|-+++
T Consensus 122 l~~~Gi~v~~vd~~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~ 188 (395)
T PRK08114 122 LSKLGVTTTWFDPLIGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTW 188 (395)
T ss_pred HHhcCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCC
Confidence 4567999999999999999999986555555544433 455678888888863 2655554443
No 326
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=58.49 E-value=31 Score=24.21 Aligned_cols=51 Identities=16% Similarity=0.191 Sum_probs=37.8
Q ss_pred CceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
.|++.+.=|++++. ...-+|+|.|++.=++. +.+..+++.|++-| ..-+|-
T Consensus 51 ~g~~~v~DDitnP~--~~iY~~A~lIYSiRppp--El~~~ildva~aVg-a~l~I~ 101 (129)
T COG1255 51 EGLRFVVDDITNPN--ISIYEGADLIYSIRPPP--ELQSAILDVAKAVG-APLYIK 101 (129)
T ss_pred ccceEEEccCCCcc--HHHhhCccceeecCCCH--HHHHHHHHHHHhhC-CCEEEE
Confidence 46667777777765 24556888888876654 47889999999999 887775
No 327
>PRK04148 hypothetical protein; Provisional
Probab=58.34 E-value=26 Score=25.31 Aligned_cols=32 Identities=9% Similarity=0.068 Sum_probs=23.4
Q ss_pred CCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 26 PVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 26 g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
++|.|++.=++ .+.+..+++.|++.| +.-+|.
T Consensus 77 ~a~liysirpp--~el~~~~~~la~~~~-~~~~i~ 108 (134)
T PRK04148 77 NAKLIYSIRPP--RDLQPFILELAKKIN-VPLIIK 108 (134)
T ss_pred cCCEEEEeCCC--HHHHHHHHHHHHHcC-CCEEEE
Confidence 45555554433 568899999999999 888875
No 328
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=58.26 E-value=25 Score=32.12 Aligned_cols=56 Identities=9% Similarity=0.041 Sum_probs=36.1
Q ss_pred ccCceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 3 YMINCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
++.|.+++.||.+|++.|+++ ++++|.|+.+.+.+. ...+++.++++.....+++.
T Consensus 457 ~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~~--~~~~iv~~~~~~~~~~~iia 513 (558)
T PRK10669 457 RERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNGY--EAGEIVASAREKRPDIEIIA 513 (558)
T ss_pred HHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCChH--HHHHHHHHHHHHCCCCeEEE
Confidence 456788999999999888876 568888877765532 23345555555331344443
No 329
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=57.84 E-value=18 Score=25.55 Aligned_cols=39 Identities=15% Similarity=0.226 Sum_probs=27.0
Q ss_pred HHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 18 ESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 18 ~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
+++.+++..+|+||.+..+. .....++.|.++| +..++-
T Consensus 59 ~~l~~~~~~~DVvIDfT~p~---~~~~~~~~~~~~g-~~~ViG 97 (124)
T PF01113_consen 59 DDLEELLEEADVVIDFTNPD---AVYDNLEYALKHG-VPLVIG 97 (124)
T ss_dssp S-HHHHTTH-SEEEEES-HH---HHHHHHHHHHHHT--EEEEE
T ss_pred hhHHHhcccCCEEEEcCChH---HhHHHHHHHHhCC-CCEEEE
Confidence 56788888899999988553 5667888888888 655554
No 330
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=57.26 E-value=23 Score=29.88 Aligned_cols=35 Identities=23% Similarity=0.085 Sum_probs=26.6
Q ss_pred HHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHh
Q 025054 18 ESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEV 52 (258)
Q Consensus 18 ~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~ 52 (258)
....++++++|+|+++++.+. ....+.+....++.
T Consensus 68 ~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 68 TDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred cChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence 345689999999999998753 45567777777776
No 331
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=57.15 E-value=37 Score=29.87 Aligned_cols=52 Identities=27% Similarity=0.354 Sum_probs=37.5
Q ss_pred ceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 6 NCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 6 gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
++.++.||.++++.|.++ +++++.|+.+.+... ....+...|++.+ +++++.
T Consensus 276 ~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~~~--~n~~~~~~~~~~~-~~~ii~ 328 (453)
T PRK09496 276 NTLVLHGDGTDQELLEEEGIDEADAFIALTNDDE--ANILSSLLAKRLG-AKKVIA 328 (453)
T ss_pred CCeEEECCCCCHHHHHhcCCccCCEEEECCCCcH--HHHHHHHHHHHhC-CCeEEE
Confidence 678999999999999765 578999998776542 2233444567777 777775
No 332
>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism]
Probab=56.89 E-value=89 Score=25.02 Aligned_cols=47 Identities=30% Similarity=0.379 Sum_probs=26.5
Q ss_pred hhchHHHHHHHHHhCCccEEEc--CCCCCCCCCCCCCCCCccchhhHHHHHHHHHhCCCCeEEE
Q 025054 39 VEDQFKLIAAIKEVGNIKRFFP--TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYV 100 (258)
Q Consensus 39 ~~~~~~li~aa~~~g~vk~~v~--S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~l 100 (258)
++....++..|.+.| |.++- |. | .+.|.+-.+--+.|++.|++|.++
T Consensus 61 LeeIi~~m~~a~~~G--k~VvRLhSG---D----------psiYgA~~EQm~~L~~~gI~yevv 109 (254)
T COG2875 61 LEEIIDLMVDAVREG--KDVVRLHSG---D----------PSIYGALAEQMRELEALGIPYEVV 109 (254)
T ss_pred HHHHHHHHHHHHHcC--CeEEEeecC---C----------hhHHHHHHHHHHHHHHcCCCeEEe
Confidence 445555666666666 44442 32 1 123444344445678889999876
No 333
>cd01028 TOPRIM_TopoIA TOPRIM_TopoIA: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in the type IA family of DNA topoisomerases (TopoIA). This subgroup contains proteins similar to the Type I DNA topoisomerases: E. coli topisomerases I and III, eukaryotic topoisomerase III and, ATP-dependent reverse gyrase found in archaea and thermophilic bacteria. Type IA DNA topoisomerases remove (relax) negative supercoils in the DNA. These enzymes cleave one strand of the DNA duplex, covalently link to the 5' phosphoryl end of the DNA break and allow the other strand of the duplex to pass through the gap. Reverse gyrase is also able to insert positive supercoils in the presence of ATP and negative supercoils in the presence of AMPPNP. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). For topoisomerases the conserved glutamate is believed to act as a general b
Probab=56.54 E-value=23 Score=25.72 Aligned_cols=46 Identities=20% Similarity=0.226 Sum_probs=32.3
Q ss_pred HHHHHhhCCCcEEEEccCccc--hhchHHHHHHHHH-hCCccEEEcCCC
Q 025054 18 ESLVKAIKPVDVVISAVGRTE--VEDQFKLIAAIKE-VGNIKRFFPTEY 63 (258)
Q Consensus 18 ~~l~~al~g~d~Vi~~~~~~~--~~~~~~li~aa~~-~g~vk~~v~S~~ 63 (258)
..|.+.++++|.||+++.++. -....++++.+.. ...++|..+|++
T Consensus 82 ~~ik~l~~~~d~iiiAtD~DrEGE~I~~~i~~~~~~~~~~v~R~~fssl 130 (142)
T cd01028 82 KALKKLAKKADEIVLATDPDREGELIAWEILEVLKCDNKPVKRAWFSEI 130 (142)
T ss_pred HHHHHHHhcCCEEEEcCCCCcchHHHHHHHHHHhCCCCCCeEEEEEccC
Confidence 456667778999999988765 3344567777765 334888888664
No 334
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=55.94 E-value=40 Score=29.77 Aligned_cols=61 Identities=10% Similarity=0.024 Sum_probs=42.8
Q ss_pred ccCceeEEeccCC-CHHHHHHhhCCCcEEEEccCccc----hhchHHHHHHHHHhCCccEEEcCCCC
Q 025054 3 YMINCLIAQGDLH-DHESLVKAIKPVDVVISAVGRTE----VEDQFKLIAAIKEVGNIKRFFPTEYG 64 (258)
Q Consensus 3 ~~~gv~~~~~D~~-d~~~l~~al~g~d~Vi~~~~~~~----~~~~~~li~aa~~~g~vk~~v~S~~~ 64 (258)
...|+++...|+. |++.++++++.-..+|.+-.+.+ +.-...|.+.|++.| +.-++-++++
T Consensus 122 ~~~Gi~v~~vd~~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~g-i~livD~T~~ 187 (432)
T PRK06702 122 RKLGIDVTFFNPNLTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELE-VPFIVDNTLA 187 (432)
T ss_pred HHCCCEEEEECCCCCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcC-CEEEEECCCC
Confidence 4578999999995 88999999975443333333333 335688999999998 8776656553
No 335
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=55.81 E-value=38 Score=29.76 Aligned_cols=53 Identities=15% Similarity=0.218 Sum_probs=39.0
Q ss_pred CceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHh-CCccEEEc
Q 025054 5 INCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEV-GNIKRFFP 60 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~-g~vk~~v~ 60 (258)
.|++++.+|.++...+.++ ++++|.|+.+.+... ....++..+++. + ..++|.
T Consensus 43 ~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~~~--~n~~~~~~~r~~~~-~~~ii~ 97 (453)
T PRK09496 43 LDVRTVVGNGSSPDVLREAGAEDADLLIAVTDSDE--TNMVACQIAKSLFG-APTTIA 97 (453)
T ss_pred cCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCChH--HHHHHHHHHHHhcC-CCeEEE
Confidence 5789999999999999998 899999998876542 233355566665 6 555553
No 336
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=55.58 E-value=23 Score=32.72 Aligned_cols=49 Identities=16% Similarity=0.197 Sum_probs=38.4
Q ss_pred ccCceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhC
Q 025054 3 YMINCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVG 53 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g 53 (258)
++.|..++.||.+|++.|+++ +++++.|+.+.+.+ +....++..+++..
T Consensus 440 ~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~--~~n~~i~~~~r~~~ 489 (601)
T PRK03659 440 RKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNEP--EDTMKIVELCQQHF 489 (601)
T ss_pred HhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCH--HHHHHHHHHHHHHC
Confidence 456888999999999999987 67899998887764 34556777777765
No 337
>COG4588 AcfC Accessory colonization factor AcfC, contains ABC-type periplasmic domain [General function prediction only]
Probab=55.47 E-value=29 Score=27.12 Aligned_cols=48 Identities=15% Similarity=0.175 Sum_probs=36.8
Q ss_pred CCCceEEEcCCCCccC-HHHHHHHHHHHhCCcceeEecCHHHHHHHHHh
Q 025054 157 TLNKTLYLRPPKNIYS-FKELVALWEKKIGKTLEKIYVTEDQILQMIQD 204 (258)
Q Consensus 157 ~~~~~~~l~g~~~~~t-~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 204 (258)
..+..+++.|||-+-| .++++..+++.+|.++.+..-|...+.+..++
T Consensus 18 ~~~adinlYGpGGPhtaL~~vA~~~~ektg~kVnvt~GPq~tW~~kAkk 66 (252)
T COG4588 18 AANADINLYGPGGPHTALKDVAKKYEEKTGIKVNVTAGPQATWNEKAKK 66 (252)
T ss_pred hhcceEEEecCCCCcHHHHHHHHHHHHHhCeEEEEecCCcchhhhhhhc
Confidence 4567788887775554 78999999999999998888887766655544
No 338
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=55.12 E-value=41 Score=28.79 Aligned_cols=60 Identities=10% Similarity=0.080 Sum_probs=41.7
Q ss_pred ccCceeEEeccCCCHHHHHHhhC-CCcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIK-PVDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~-g~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
...|+++...|..|.+.+.++++ +...|+...+... ......|++.|++.| +.-++-..+
T Consensus 112 ~~~G~~v~~vd~~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g-~~lIvD~t~ 175 (366)
T PRK08247 112 KKWNVRFVYVNTASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHG-LLLIVDNTF 175 (366)
T ss_pred hccCceEEEECCCCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcC-CEEEEECCC
Confidence 45789999999999999999986 4556654333221 455678888999888 654443444
No 339
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=55.00 E-value=34 Score=29.48 Aligned_cols=59 Identities=12% Similarity=0.123 Sum_probs=40.9
Q ss_pred cCceeEEeccCCCHHHHHHhhCC-CcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 4 MINCLIAQGDLHDHESLVKAIKP-VDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
..|+++...|..|++.+.++++. ...|+....... +...+.+.+.|++.| +.-++-.++
T Consensus 108 ~~G~~v~~vd~~d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g-~~vivD~a~ 170 (378)
T TIGR01329 108 RSGVVVVHVDTTDLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQN-ALVVVDNTM 170 (378)
T ss_pred HcCcEEEEeCCCCHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcC-CEEEEECCC
Confidence 46899999999999999999974 444443322211 445678889999988 766664443
No 340
>PRK05968 hypothetical protein; Provisional
Probab=54.85 E-value=37 Score=29.36 Aligned_cols=59 Identities=17% Similarity=0.197 Sum_probs=41.8
Q ss_pred cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
..|+++...|..|++.+.+++.+...|+....... +.....+.+.|++.| +.-++-.++
T Consensus 125 ~~G~~v~~vd~~d~~~l~~~i~~tklV~ie~pt~~~~~~~dl~~i~~la~~~g-i~vivD~a~ 186 (389)
T PRK05968 125 RMGVEVDYVDGRDEEAVAKALPGAKLLYLESPTSWVFELQDVAALAALAKRHG-VVTMIDNSW 186 (389)
T ss_pred HcCceEEEeCCCCHHHHHHhcccCCEEEEECCCCCCCcHHHHHHHHHHHHHcC-CEEEEECCC
Confidence 35888988999999999999877676654432221 455678888999988 765554443
No 341
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=54.79 E-value=34 Score=29.59 Aligned_cols=59 Identities=14% Similarity=0.108 Sum_probs=39.8
Q ss_pred cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
..|++++..|..|.+.+.++++.-..++.+-.+.+ +.....|++.|++.| +.-++-.++
T Consensus 123 ~~G~~v~~vd~~d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~g-i~livD~t~ 185 (390)
T PRK08133 123 RFGIETTFVDLTDLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAG-ALLVVDNCF 185 (390)
T ss_pred HcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcC-CEEEEECCC
Confidence 46889999999999999999975333333222222 344578889999988 765554443
No 342
>PRK10537 voltage-gated potassium channel; Provisional
Probab=54.78 E-value=31 Score=30.03 Aligned_cols=48 Identities=21% Similarity=0.214 Sum_probs=35.3
Q ss_pred cCceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhC
Q 025054 4 MINCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVG 53 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g 53 (258)
+.|+.++.||.+|++.|.++ +++++.|+.+...+. ....++.+|++.+
T Consensus 279 ~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t~dD~--~Nl~ivL~ar~l~ 327 (393)
T PRK10537 279 PDDADLIPGDSSDSAVLKKAGAARARAILALRDNDA--DNAFVVLAAKEMS 327 (393)
T ss_pred cCCCcEEEeCCCCHHHHHhcCcccCCEEEEcCCChH--HHHHHHHHHHHhC
Confidence 45788999999999999987 678999988776542 2334555666655
No 343
>PF05402 PqqD: Coenzyme PQQ synthesis protein D (PqqD); InterPro: IPR008792 This family contains several bacterial coenzyme PQQ synthesis protein D (PqqD) sequences. This protein is required for coenzyme pyrrolo-quinoline-quinone (PQQ) biosynthesis.; PDB: 3G2B_A.
Probab=54.09 E-value=18 Score=22.27 Aligned_cols=53 Identities=11% Similarity=0.170 Sum_probs=33.0
Q ss_pred eccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHhcc
Q 025054 139 NKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDAS 206 (258)
Q Consensus 139 v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 206 (258)
....+.|.++...++ + ..|..|+++.+.+.++.+.....-...++.+.+.+.+
T Consensus 13 ~~Ln~~a~~Iw~~~~--------------g-~~t~~ei~~~l~~~y~~~~~~~~~dv~~fl~~L~~~g 65 (68)
T PF05402_consen 13 FTLNETAAFIWELLD--------------G-PRTVEEIVDALAEEYDVDPEEAEEDVEEFLEQLREKG 65 (68)
T ss_dssp ----THHHHHHHH----------------S-SS-HHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHTT
T ss_pred ccccHHHHHHHHHcc--------------C-CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHCc
Confidence 388899999988873 2 5788999999999998766544555566666666554
No 344
>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells [].
Probab=52.39 E-value=72 Score=24.69 Aligned_cols=89 Identities=17% Similarity=0.171 Sum_probs=50.4
Q ss_pred cCceeEEeccCCCHHHHHHhhC-CCcEEEEccCccchhchHHHHHHHHHhCCccEEEcCC--CCC------------CC-
Q 025054 4 MINCLIAQGDLHDHESLVKAIK-PVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTE--YGS------------NV- 67 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~-g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S~--~~~------------~~- 67 (258)
+.|+.++++|+++ .|...-. ..|+||..-....+.....+++.+.+.| ++.|-|. ||. .+
T Consensus 54 ~rGv~Viq~Dld~--gL~~f~d~sFD~VIlsqtLQ~~~~P~~vL~EmlRVg--r~~IVsFPNFg~W~~R~~l~~~GrmPv 129 (193)
T PF07021_consen 54 ARGVSVIQGDLDE--GLADFPDQSFDYVILSQTLQAVRRPDEVLEEMLRVG--RRAIVSFPNFGHWRNRLQLLLRGRMPV 129 (193)
T ss_pred HcCCCEEECCHHH--hHhhCCCCCccEEehHhHHHhHhHHHHHHHHHHHhc--CeEEEEecChHHHHHHHHHHhcCCCCC
Confidence 4678888888854 2333222 3588876554444556677888888877 3444221 111 11
Q ss_pred CC---CCCCCCCccchhhHHHHHHHHHhCCCC
Q 025054 68 DA---GHPIEPAKSGYARKAKIRRAIEAEGIP 96 (258)
Q Consensus 68 ~~---~~~~~~~~~~~~~k~~~e~~l~~~~~~ 96 (258)
+. ...++.++-++-+-...|+..++.|+.
T Consensus 130 t~~lPy~WYdTPNih~~Ti~DFe~lc~~~~i~ 161 (193)
T PF07021_consen 130 TKALPYEWYDTPNIHLCTIKDFEDLCRELGIR 161 (193)
T ss_pred CCCCCCcccCCCCcccccHHHHHHHHHHCCCE
Confidence 10 112223444556777788888887654
No 345
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=51.52 E-value=43 Score=25.61 Aligned_cols=148 Identities=16% Similarity=0.172 Sum_probs=77.0
Q ss_pred eeEEeccCCCHHHHHHhhCC---CcEEEEccCccc-------------------hhchHHHHHH----HHHhCCcc-EEE
Q 025054 7 CLIAQGDLHDHESLVKAIKP---VDVVISAVGRTE-------------------VEDQFKLIAA----IKEVGNIK-RFF 59 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~g---~d~Vi~~~~~~~-------------------~~~~~~li~a----a~~~g~vk-~~v 59 (258)
++.+.+|+.+.+.+.+++-. .|.+++.++... +....++.+. ....+ ++ -+|
T Consensus 55 I~Pi~~Dls~wea~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~-~~GaIV 133 (245)
T KOG1207|consen 55 IIPIVGDLSAWEALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQ-IKGAIV 133 (245)
T ss_pred eeeeEecccHHHHHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhcc-CCceEE
Confidence 78889999999999998874 477777776421 1111112111 11112 22 133
Q ss_pred c-CCCCCCCCCCCCCCCCccchhhHHHHHHHHH----h---CCCCeEEEecCcccccCc-CCCCCCCCCCCCCCceEecc
Q 025054 60 P-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIE----A---EGIPHTYVSCNCSFGFFL-PTMAQPGATAPPRENILFYG 130 (258)
Q Consensus 60 ~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~----~---~~~~~t~lr~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g 130 (258)
- |+-..... ...+.-|..+|+..+-.-+ + ..+.+-.+.|..+|.... ..+..+ .+.+ ++..
T Consensus 134 NvSSqas~R~----~~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP-----~K~k-~mL~ 203 (245)
T KOG1207|consen 134 NVSSQASIRP----LDNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDP-----DKKK-KMLD 203 (245)
T ss_pred Eecchhcccc----cCCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCc-----hhcc-chhh
Confidence 3 44433222 2235667778888764432 2 346777777777775322 122222 1111 1111
Q ss_pred CCCceeeeeccchHHHHHHHHhcCCC--CCCceEEEcC
Q 025054 131 DGQPKAIFNKEEDIATYTIKAVDDPR--TLNKTLYLRP 166 (258)
Q Consensus 131 ~g~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~l~g 166 (258)
.-.. --|.-++.+..++..+|++.. ..|..+.+-|
T Consensus 204 riPl-~rFaEV~eVVnA~lfLLSd~ssmttGstlpveG 240 (245)
T KOG1207|consen 204 RIPL-KRFAEVDEVVNAVLFLLSDNSSMTTGSTLPVEG 240 (245)
T ss_pred hCch-hhhhHHHHHHhhheeeeecCcCcccCceeeecC
Confidence 0000 125677888888888887753 3455555543
No 346
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=50.98 E-value=49 Score=29.18 Aligned_cols=60 Identities=18% Similarity=0.139 Sum_probs=40.7
Q ss_pred ccCceeEEeccCCCHHHHHHhhCC-CcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIKP-VDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
...|++++..|..|.+.+.++++. ...|+....... +.-...|.+.|++.| +.-++-..+
T Consensus 125 ~~~Gv~v~~vd~~d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~g-i~vIvD~t~ 188 (431)
T PRK08248 125 PKLGITVKFVDPSDPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHG-IPLIVDNTF 188 (431)
T ss_pred HhCCEEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcC-CEEEEeCCC
Confidence 457899999999999999999974 555544322111 333467888888888 765554444
No 347
>PRK07503 methionine gamma-lyase; Provisional
Probab=50.93 E-value=49 Score=28.83 Aligned_cols=60 Identities=18% Similarity=0.164 Sum_probs=40.7
Q ss_pred ccCceeEEeccCCCHHHHHHhhCC-CcEEEEccCcc---chhchHHHHHHHHHhCCccEEEcCCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIKP-VDVVISAVGRT---EVEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~---~~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
...|+++...|..|++.+.++++. ...|+...... .+.-...|.+.|++.| +.-++-..+
T Consensus 126 ~~~G~~v~~vd~~d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~g-i~lIvD~a~ 189 (403)
T PRK07503 126 GEFGVTVRHVDLTDPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAG-AKVVVDNTY 189 (403)
T ss_pred hhCCEEEEEeCCCCHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcC-CEEEEECCC
Confidence 457899999999999999999864 55555322211 1334577888898888 755554444
No 348
>PF08123 DOT1: Histone methylation protein DOT1 ; InterPro: IPR013110 The DOT1 domain regulates gene expression by methylating histone H3 []. H3 methylation by DOT1 has been shown to be required for the DNA damage checkpoint in yeast [].; GO: 0018024 histone-lysine N-methyltransferase activity; PDB: 4ER3_A 4ER6_A 4EQZ_A 1NW3_A 3UWP_A 4ER5_A 3QOX_A 3SX0_A 4ER7_A 3SR4_A ....
Probab=50.51 E-value=42 Score=26.25 Aligned_cols=56 Identities=16% Similarity=0.138 Sum_probs=31.6
Q ss_pred CceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
..+++..+|+.+.+.....++++|+||...-...-+....|.+.+.+...--++|.
T Consensus 101 ~~v~l~~gdfl~~~~~~~~~s~AdvVf~Nn~~F~~~l~~~L~~~~~~lk~G~~IIs 156 (205)
T PF08123_consen 101 GKVELIHGDFLDPDFVKDIWSDADVVFVNNTCFDPDLNLALAELLLELKPGARIIS 156 (205)
T ss_dssp -EEEEECS-TTTHHHHHHHGHC-SEEEE--TTT-HHHHHHHHHHHTTS-TT-EEEE
T ss_pred ccceeeccCccccHhHhhhhcCCCEEEEeccccCHHHHHHHHHHHhcCCCCCEEEE
Confidence 34788899999999888889999999754333333344455444444331245664
No 349
>PRK08223 hypothetical protein; Validated
Probab=50.01 E-value=56 Score=27.05 Aligned_cols=55 Identities=18% Similarity=0.193 Sum_probs=35.5
Q ss_pred eeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc-CCCC
Q 025054 7 CLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP-TEYG 64 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~-S~~~ 64 (258)
++.+...++ .+.+.+.++++|.|+.+........-..+-++|++.+ +. +|+ +..+
T Consensus 99 V~~~~~~l~-~~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~-iP-~V~~~~~g 154 (287)
T PRK08223 99 IRAFPEGIG-KENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRG-IP-ALTAAPLG 154 (287)
T ss_pred EEEEecccC-ccCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcC-CC-EEEEeccC
Confidence 333444443 4556778899999998776533344566778899988 55 454 5544
No 350
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=49.85 E-value=26 Score=28.65 Aligned_cols=31 Identities=16% Similarity=0.247 Sum_probs=18.4
Q ss_pred HHHhhCCCcEEEEccCccchhchHHHHHHHHHhC
Q 025054 20 LVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVG 53 (258)
Q Consensus 20 l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g 53 (258)
+.+.++++|+|+-+++... ...++.++.++|
T Consensus 61 ~eell~~~D~Vvi~tp~~~---h~e~~~~aL~aG 91 (271)
T PRK13302 61 LDQLATHADIVVEAAPASV---LRAIVEPVLAAG 91 (271)
T ss_pred HHHHhcCCCEEEECCCcHH---HHHHHHHHHHcC
Confidence 4445678899998887542 233444444445
No 351
>PF03686 UPF0146: Uncharacterised protein family (UPF0146); InterPro: IPR005353 The function of this family of proteins is unknown.; PDB: 2K4M_A.
Probab=49.74 E-value=42 Score=23.99 Aligned_cols=51 Identities=16% Similarity=0.156 Sum_probs=31.5
Q ss_pred CceeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 5 INCLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
.|++++.=|+.+++ .+..+++|.|++.=.+ .+.+..+++.|++.| +.-+|.
T Consensus 51 ~g~~~v~DDif~P~--l~iY~~a~lIYSiRPP--~El~~~il~lA~~v~-adlii~ 101 (127)
T PF03686_consen 51 EGVNFVVDDIFNPN--LEIYEGADLIYSIRPP--PELQPPILELAKKVG-ADLIIR 101 (127)
T ss_dssp -STTEE---SSS----HHHHTTEEEEEEES----TTSHHHHHHHHHHHT--EEEEE
T ss_pred cCcceeeecccCCC--HHHhcCCcEEEEeCCC--hHHhHHHHHHHHHhC-CCEEEE
Confidence 35666666666665 2455688888876554 458899999999999 887774
No 352
>COG1234 ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only]
Probab=49.18 E-value=57 Score=27.07 Aligned_cols=54 Identities=22% Similarity=0.353 Sum_probs=39.0
Q ss_pred eeEEeccCCCHHHHHHhhCCCcEEEEccCccc-hh---------chHHHHHHHHHhCCccEEEcC
Q 025054 7 CLIAQGDLHDHESLVKAIKPVDVVISAVGRTE-VE---------DQFKLIAAIKEVGNIKRFFPT 61 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~-~~---------~~~~li~aa~~~g~vk~~v~S 61 (258)
.=++.||-.-.+.+.+..+++|.+||=+.... .+ -.....+.|+++| ||+++.+
T Consensus 192 ~v~ysGDT~p~~~~~~~a~~aDlLiHEat~~~~~~~~a~~~~HsT~~eAa~iA~~A~-vk~LiLt 255 (292)
T COG1234 192 SVVYSGDTRPCDELIDLAKGADLLIHEATFEDDLEDLANEGGHSTAEEAAEIAKEAG-VKKLILT 255 (292)
T ss_pred EEEEECCCCCCHHHHHHhcCCCEEEEeccCCchhhhHHhhcCCCCHHHHHHHHHHcC-CCeEEEE
Confidence 34567888767777777899999999887643 11 1245667778899 9999963
No 353
>KOG3923 consensus D-aspartate oxidase [Amino acid transport and metabolism]
Probab=48.79 E-value=15 Score=30.50 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=28.5
Q ss_pred cccCceeEEeccCCCHHHHHHhhCCCcEEEEccCcc
Q 025054 2 LYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRT 37 (258)
Q Consensus 2 l~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~ 37 (258)
|...|+++++--++|.+.+.+ ++.|+|+||++..
T Consensus 161 l~e~Gvef~~r~v~~l~E~~~--~~~DVivNCtGL~ 194 (342)
T KOG3923|consen 161 LTENGVEFVQRRVESLEEVAR--PEYDVIVNCTGLG 194 (342)
T ss_pred HHhcCcEEEEeeeccHHHhcc--CCCcEEEECCccc
Confidence 456899999998888777666 8999999999864
No 354
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=48.41 E-value=63 Score=28.01 Aligned_cols=59 Identities=12% Similarity=0.073 Sum_probs=39.6
Q ss_pred ccCceeEEeccCCCHHHHHHhhCC-CcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIKP-VDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTE 62 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~ 62 (258)
...|+++...|++|.+.+.+++.. ...|+....... +.....|.+.|++.| +.-++-..
T Consensus 120 ~~~G~~~~~vd~~d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~g-i~livD~a 182 (391)
T TIGR01328 120 TKFGIQVDFINMAIPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQG-VKVIVDNT 182 (391)
T ss_pred hcCCeEEEEECCCCHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcC-CEEEEECC
Confidence 346889999999999999998864 445543222111 334567888888888 76655343
No 355
>PRK08064 cystathionine beta-lyase; Provisional
Probab=48.07 E-value=52 Score=28.49 Aligned_cols=59 Identities=15% Similarity=0.192 Sum_probs=40.0
Q ss_pred cCceeEEeccCCCHHHHHHhhC-CCcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 4 MINCLIAQGDLHDHESLVKAIK-PVDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~-g~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
..|+++...|+.|.+.+.++++ +...|+.+.+... +.....|.+.|++.| +.-+|-..+
T Consensus 115 ~~G~~v~~v~~~d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g-~~vvvD~a~ 177 (390)
T PRK08064 115 RFGIEHTFVDMTNLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIG-CLTFVDNTF 177 (390)
T ss_pred HcCCEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcC-CEEEEECCC
Confidence 4688999999999999999986 4555554333211 344567888888888 755553444
No 356
>PF10100 DUF2338: Uncharacterized protein conserved in bacteria (DUF2338); InterPro: IPR016935 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=47.92 E-value=58 Score=28.35 Aligned_cols=67 Identities=13% Similarity=0.130 Sum_probs=43.7
Q ss_pred hhCCCcEEEEccCccc-hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHhCCCCeEEE
Q 025054 23 AIKPVDVVISAVGRTE-VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEAEGIPHTYV 100 (258)
Q Consensus 23 al~g~d~Vi~~~~~~~-~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~~~~~t~l 100 (258)
.-...|++|.++..+. ...-+.|-.+. -.+ ||++|. |. .+.++..++..+.+.+....+|
T Consensus 80 i~g~WdtlILavtaDAY~~VL~ql~~~~-L~~-vk~iVLvSP----------------tfGS~~lv~~~l~~~~~~~EVI 141 (429)
T PF10100_consen 80 IEGEWDTLILAVTADAYLDVLQQLPWEV-LKR-VKSIVLVSP----------------TFGSHLLVKGFLNDLGPDAEVI 141 (429)
T ss_pred hcccccEEEEEechHHHHHHHHhcCHHH-Hhh-CCEEEEECc----------------ccchHHHHHHHHHhcCCCceEE
Confidence 3345788887776654 22222332222 235 999998 42 2345577888999888888888
Q ss_pred ecCcccc
Q 025054 101 SCNCSFG 107 (258)
Q Consensus 101 r~~~~~~ 107 (258)
-.+.++|
T Consensus 142 SFStY~g 148 (429)
T PF10100_consen 142 SFSTYYG 148 (429)
T ss_pred Eeecccc
Confidence 8888887
No 357
>smart00812 Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site PUBMED:. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.
Probab=47.81 E-value=35 Score=29.61 Aligned_cols=48 Identities=17% Similarity=0.115 Sum_probs=37.2
Q ss_pred CCCHHHHHHhhC--CCcEEEEccCccc--------------------hhchHHHHHHHHHhCCccEEEc-CC
Q 025054 14 LHDHESLVKAIK--PVDVVISAVGRTE--------------------VEDQFKLIAAIKEVGNIKRFFP-TE 62 (258)
Q Consensus 14 ~~d~~~l~~al~--g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~g~vk~~v~-S~ 62 (258)
-.|++.+.++++ |+..|+.++-.++ .+..+.+++||++.| +|--++ |.
T Consensus 80 ~fD~~~Wa~~~k~AGakY~vlTaKHHDGF~lw~S~~t~~n~~~~~pkrDiv~el~~A~rk~G-lk~G~Y~S~ 150 (384)
T smart00812 80 KFDPEEWADLFKKAGAKYVVLTAKHHDGFCLWDSKYSNWNAVDTGPKRDLVGELADAVRKRG-LKFGLYHSL 150 (384)
T ss_pred hCCHHHHHHHHHHcCCCeEEeeeeecCCccccCCCCCCCcccCCCCCcchHHHHHHHHHHcC-CeEEEEcCH
Confidence 358888888887 7788877764321 466789999999999 999887 75
No 358
>PRK05967 cystathionine beta-lyase; Provisional
Probab=47.67 E-value=75 Score=27.68 Aligned_cols=60 Identities=12% Similarity=0.128 Sum_probs=40.6
Q ss_pred ccCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
+..|+++...|.++.+.++++++.-..++.+-.+.+ +.....|.+.|++.| +--++-.++
T Consensus 125 ~~~Gi~v~~vd~~~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g-~~vvVD~t~ 188 (395)
T PRK05967 125 KRLGVEVEYYDPEIGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHG-AIVMMDNTW 188 (395)
T ss_pred HhcCeEEEEeCCCCHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhC-CEEEEECCc
Confidence 456888888888888889999975444444433322 555678889999988 765553443
No 359
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=47.18 E-value=75 Score=27.49 Aligned_cols=60 Identities=17% Similarity=0.211 Sum_probs=41.2
Q ss_pred ccCceeEEeccCCCHHHHHHhhCC-CcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIKP-VDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
...|+++...|..|.+.+.++++. ...|+....... +.....|.+.|++.| +.-++-.++
T Consensus 122 ~~~gi~~~~~d~~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~g-i~lIvD~a~ 185 (388)
T PRK07811 122 TRWGVEYTPVDLSDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAG-AKVVVDNTF 185 (388)
T ss_pred cCCCeEEEEeCCCCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcC-CEEEEECCC
Confidence 346899999999999999999864 555554332211 455678888899888 655554444
No 360
>PRK09028 cystathionine beta-lyase; Provisional
Probab=46.79 E-value=81 Score=27.45 Aligned_cols=61 Identities=16% Similarity=0.064 Sum_probs=40.6
Q ss_pred ccCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----hhchHHHHHHHHHhCCccEEEcCCCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----VEDQFKLIAAIKEVGNIKRFFPTEYG 64 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----~~~~~~li~aa~~~g~vk~~v~S~~~ 64 (258)
...|+++...|..+.+.+.++++.-..++.+-.+.+ +.-.+.|++.|++.| +--++-..++
T Consensus 122 ~~~Gi~v~~v~~~~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g-~~lvvD~t~a 186 (394)
T PRK09028 122 KGFGIETTYYDPMIGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHD-IVVMLDNTWA 186 (394)
T ss_pred hhcceEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcC-CEEEEECCcc
Confidence 456888888888788889998875333333333332 455678889999988 7666644443
No 361
>PF06415 iPGM_N: BPG-independent PGAM N-terminus (iPGM_N); InterPro: IPR011258 This family represents the N-terminal region of the 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (or phosphoglyceromutase or BPG-independent PGAM) protein (5.4.2.1 from EC). The family is found in conjunction with Metalloenzyme (located in the C-terminal region of the protein). ; GO: 0004619 phosphoglycerate mutase activity, 0030145 manganese ion binding, 0006007 glucose catabolic process, 0005737 cytoplasm; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3IGZ_B 3IGY_B 3NVL_A 2IFY_A.
Probab=46.51 E-value=77 Score=25.17 Aligned_cols=76 Identities=21% Similarity=0.352 Sum_probs=41.8
Q ss_pred ccCCCHHHHHHhhC---CCcEEEEccCccc-------hhchHHHHHHHHHhCCccEE-EcCCC-CCCCCCCCCCCCCccc
Q 025054 12 GDLHDHESLVKAIK---PVDVVISAVGRTE-------VEDQFKLIAAIKEVGNIKRF-FPTEY-GSNVDAGHPIEPAKSG 79 (258)
Q Consensus 12 ~D~~d~~~l~~al~---g~d~Vi~~~~~~~-------~~~~~~li~aa~~~g~vk~~-v~S~~-~~~~~~~~~~~~~~~~ 79 (258)
+++.+-+.|.++++ .-+.-+|+.|.-. ......|++.|++.| |+++ |+-.. |-+.. |. +.
T Consensus 8 g~~~~n~~l~~~~~~~k~~~~~lHl~GLlSdGGVHSh~~Hl~al~~~a~~~g-v~~V~vH~f~DGRDt~------P~-S~ 79 (223)
T PF06415_consen 8 GSFFKNPVLLEAIEHAKKNGGRLHLMGLLSDGGVHSHIDHLFALIKLAKKQG-VKKVYVHAFTDGRDTP------PK-SA 79 (223)
T ss_dssp TGGGTSHHHHHHHHHHCCTT--EEEEEEESS-SSS--HHHHHHHHHHHHHTT--SEEEEEEEE-SSSS-------TT-TH
T ss_pred CCcccCHHHHHHHHHHHhcCCeEEEEEEecCCCccccHHHHHHHHHHHHHcC-CCEEEEEEecCCCCCC------cc-hH
Confidence 34444455666554 3455677776421 677789999999999 9976 66332 33322 22 22
Q ss_pred hhhHHHHHHHHHhCCC
Q 025054 80 YARKAKIRRAIEAEGI 95 (258)
Q Consensus 80 ~~~k~~~e~~l~~~~~ 95 (258)
...-..+++.+.+.+.
T Consensus 80 ~~yl~~l~~~l~~~~~ 95 (223)
T PF06415_consen 80 LKYLEELEEKLAEIGI 95 (223)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhhCC
Confidence 2333456666666544
No 362
>PRK07671 cystathionine beta-lyase; Provisional
Probab=46.20 E-value=70 Score=27.56 Aligned_cols=61 Identities=15% Similarity=0.133 Sum_probs=41.3
Q ss_pred ccCceeEEeccCCCHHHHHHhhC-CCcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCCCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIK-PVDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTEYG 64 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~-g~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~~~ 64 (258)
...|++++..|..|.+.+.++++ +...|+...+... +.....|.+.|++.| +.-++-.+++
T Consensus 110 ~~~G~~v~~v~~~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g-~~lvvD~a~~ 174 (377)
T PRK07671 110 NRFGIEHTFVDTSNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKG-LLTIVDNTFM 174 (377)
T ss_pred hcCCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcC-CEEEEECCCC
Confidence 34689999999989999999996 4555553322211 445677888888888 7655544443
No 363
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=45.81 E-value=47 Score=23.81 Aligned_cols=52 Identities=17% Similarity=0.153 Sum_probs=25.0
Q ss_pred cccCceeEEeccCC-CHHHHH-HhhC-CCcEE-EEccCccchhchHHHHHHHHHhC
Q 025054 2 LYMINCLIAQGDLH-DHESLV-KAIK-PVDVV-ISAVGRTEVEDQFKLIAAIKEVG 53 (258)
Q Consensus 2 l~~~gv~~~~~D~~-d~~~l~-~al~-g~d~V-i~~~~~~~~~~~~~li~aa~~~g 53 (258)
|+..|.+++..=.+ .++.+. +|.+ ++|+| ++..........+.+++..+++|
T Consensus 23 L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~g 78 (128)
T cd02072 23 FTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAG 78 (128)
T ss_pred HHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCC
Confidence 45556666543222 223333 3332 56665 33333333455666666666666
No 364
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=45.65 E-value=85 Score=25.68 Aligned_cols=33 Identities=21% Similarity=0.262 Sum_probs=24.6
Q ss_pred CceeEEeccCCCHHHHHHhhC-------CCcEEEEccCcc
Q 025054 5 INCLIAQGDLHDHESLVKAIK-------PVDVVISAVGRT 37 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~-------g~d~Vi~~~~~~ 37 (258)
..++++.+|+++-.++.+|.+ .-|.|+..++..
T Consensus 61 i~~~yvlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~ 100 (341)
T KOG1478|consen 61 IEVTYVLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIM 100 (341)
T ss_pred eEEEEEEEehhhHHHHHHHHHHHHHHhhhccEEEEccccC
Confidence 457889999998776666544 579998877753
No 365
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=45.55 E-value=40 Score=31.35 Aligned_cols=50 Identities=22% Similarity=0.283 Sum_probs=37.2
Q ss_pred cccCceeEEeccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhC
Q 025054 2 LYMINCLIAQGDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVG 53 (258)
Q Consensus 2 l~~~gv~~~~~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g 53 (258)
+++.|.+++.||.+|++.|+++ ++.++.|+.+.+.+ +....++..+++..
T Consensus 439 ~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~--~~n~~i~~~ar~~~ 489 (621)
T PRK03562 439 LRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDP--QTSLQLVELVKEHF 489 (621)
T ss_pred HHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCH--HHHHHHHHHHHHhC
Confidence 3456889999999999999876 67899998887653 34556666776654
No 366
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=45.53 E-value=65 Score=27.80 Aligned_cols=60 Identities=17% Similarity=0.172 Sum_probs=40.5
Q ss_pred ccCceeEEeccCCCHHHHHHhhCC-CcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIKP-VDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
...|+++...|..|.+.+.++++. ...|+...+... +.....|.+.|++.| +.-++-+.+
T Consensus 110 ~~~gi~v~~vd~~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~g-i~vivD~t~ 173 (380)
T PRK06176 110 VKNGLSCTIIDTSDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHG-LLTIVDNTF 173 (380)
T ss_pred HhcCeEEEEcCCCCHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcC-CEEEEECCc
Confidence 346889999999999999999874 555553222211 334568888899888 765554443
No 367
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=45.32 E-value=61 Score=28.23 Aligned_cols=60 Identities=12% Similarity=0.015 Sum_probs=40.6
Q ss_pred ccCceeEEeccCCCHHHHHHhhCC-CcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIKP-VDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
+..|+++...|..|.+.+.++++. ...|+....... +.....|.+.|++.| +--++-.++
T Consensus 131 ~~~G~~v~~vd~~d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g-~~vivD~a~ 194 (403)
T PRK07810 131 PRWGVETVFVDGEDLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAG-AKVVLDNVF 194 (403)
T ss_pred HHcCcEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcC-CEEEEECCC
Confidence 446899999999999999999874 455543222211 344677888899888 665553444
No 368
>PF13483 Lactamase_B_3: Beta-lactamase superfamily domain; PDB: 1VJN_B 3KL7_A.
Probab=45.20 E-value=69 Score=23.59 Aligned_cols=54 Identities=20% Similarity=0.191 Sum_probs=29.5
Q ss_pred ceeE-EeccCCCH--HHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 6 NCLI-AQGDLHDH--ESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 6 gv~~-~~~D~~d~--~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
|.++ ..||.... ......+..+|+++..++....-.....++++++.+ .|.+|+
T Consensus 105 g~~i~~~Gd~~~~~~~~~~~~~~~vDvl~~p~~g~~~~~~~~a~~~~~~l~-pk~viP 161 (163)
T PF13483_consen 105 GVTIYHAGDTGFPPDDEQLKQLGKVDVLFLPVGGPFTMGPEEAAELAERLK-PKLVIP 161 (163)
T ss_dssp TEEEEE-TT--S---HHHHHHH-S-SEEEEE--TTTS--HHHHHHHHHHCT--SEEEE
T ss_pred CCEEEEECCCccCCCHHHHhcccCCCEEEecCCCCcccCHHHHHHHHHHcC-CCEEEe
Confidence 4444 35676542 333456678999988887654445677888888888 888876
No 369
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=45.07 E-value=92 Score=27.09 Aligned_cols=61 Identities=20% Similarity=0.225 Sum_probs=40.8
Q ss_pred ccCceeEEeccCCCHHHHHHhhCC-CcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCCCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIKP-VDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTEYG 64 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~~~ 64 (258)
...|+++...|..|++.+.++++. ...|+....... +.-...|.+.|++.| +.-++-..++
T Consensus 125 ~~~Gi~v~~vd~~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~g-i~livD~t~a 189 (398)
T PRK08249 125 PRMGVDVTLCETGDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVG-ALVVVDNTFA 189 (398)
T ss_pred hhCCeEEEEcCCCCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcC-CEEEEECCcC
Confidence 356899998999999999999974 555543222211 333567888899988 7655544443
No 370
>PRK14851 hypothetical protein; Provisional
Probab=44.59 E-value=83 Score=29.66 Aligned_cols=51 Identities=18% Similarity=0.189 Sum_probs=36.3
Q ss_pred eeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEE
Q 025054 7 CLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFF 59 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v 59 (258)
++.+...++ .+.+.+.++++|+||.+........-..+.++|.+.+ +.-+.
T Consensus 115 I~~~~~~i~-~~n~~~~l~~~DvVid~~D~~~~~~r~~l~~~c~~~~-iP~i~ 165 (679)
T PRK14851 115 ITPFPAGIN-ADNMDAFLDGVDVVLDGLDFFQFEIRRTLFNMAREKG-IPVIT 165 (679)
T ss_pred EEEEecCCC-hHHHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHCC-CCEEE
Confidence 455555664 5677888999999999886543444567788899888 66443
No 371
>TIGR02649 true_RNase_BN ribonuclease BN. Members of this protein family are ribonuclease BN of Escherichia coli K-12 and closely related proteins believed to be equivalent in function. Note that E. coli appears to lack RNase Z per se, and this protein of E. coli appears orthologous to (but not functionally equivalent to) RNase Z of Bacillus subtilis and various other species. Meanwhile, the yihY gene product of E. coli previously was incorrectly identified as RNase BN.
Probab=44.37 E-value=81 Score=26.11 Aligned_cols=51 Identities=16% Similarity=0.190 Sum_probs=35.9
Q ss_pred EEeccCCCHHHHHHhhCCCcEEEEccCccc--h--------hchHHHHHHHHHhCCccEEEc
Q 025054 9 IAQGDLHDHESLVKAIKPVDVVISAVGRTE--V--------EDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 9 ~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--~--------~~~~~li~aa~~~g~vk~~v~ 60 (258)
++.+|-.-.+.+.+.++|+|.+||-+.... . .....+++.|++++ +|+++.
T Consensus 206 ~y~gDt~~~~~~~~~~~~adlLi~Eat~~~~~~~~a~~~~H~t~~~a~~~a~~~~-~k~lvL 266 (303)
T TIGR02649 206 AIFGDTGPCDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAG-VGKLII 266 (303)
T ss_pred EEecCCCChHHHHHHhcCCCEEEEeccCChhhHHHHhhcCCCCHHHHHHHHHHcC-CCEEEE
Confidence 456676556778888999999999877532 0 11244666777888 999886
No 372
>PRK14852 hypothetical protein; Provisional
Probab=43.72 E-value=89 Score=30.73 Aligned_cols=50 Identities=16% Similarity=0.201 Sum_probs=36.0
Q ss_pred eEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEE
Q 025054 8 LIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFF 59 (258)
Q Consensus 8 ~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v 59 (258)
+.+...+ +.+.+.+.++++|+||.+......+..+.+.++|.+.| +.-+.
T Consensus 405 ~~~~~~I-~~en~~~fl~~~DiVVDa~D~~~~~~rr~l~~~c~~~~-IP~I~ 454 (989)
T PRK14852 405 RSFPEGV-AAETIDAFLKDVDLLVDGIDFFALDIRRRLFNRALELG-IPVIT 454 (989)
T ss_pred EEEecCC-CHHHHHHHhhCCCEEEECCCCccHHHHHHHHHHHHHcC-CCEEE
Confidence 3343344 56778888999999999887654555678888998888 66544
No 373
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=43.68 E-value=94 Score=26.57 Aligned_cols=59 Identities=22% Similarity=0.213 Sum_probs=40.2
Q ss_pred cCceeEEeccCCCHHHHHHhhCC-CcEEEEccCcc---chhchHHHHHHHHHhCCccEEEcCCC
Q 025054 4 MINCLIAQGDLHDHESLVKAIKP-VDVVISAVGRT---EVEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~---~~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
..|+++...|.+|.+.+.++++. ...|+...... .+.....|.+.|++.| +.-++-.++
T Consensus 102 ~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g-~~livD~t~ 164 (369)
T cd00614 102 KLGIEVTFVDPDDPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHG-ALLVVDNTF 164 (369)
T ss_pred hcCeEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcC-CEEEEECCC
Confidence 46888888999999999999964 45554322211 1344568889999988 766664444
No 374
>TIGR03855 NAD_NadX aspartate dehydrogenase. Members of this protein family are L-aspartate dehydrogenase, as shown for the NADP-dependent enzyme TM_1643 of Thermotoga maritima. Members lack homology to NadB, the aspartate oxidase (EC 1.4.3.16) of most mesophilic bacteria (described by TIGR00551), which this enzyme replaces in the generation of oxaloacetate from aspartate for the NAD biosynthetic pathway. All members of the seed alignment are found adjacent to other genes of NAD biosynthesis, although other uses of L-aspartate dehydrogenase may occur.
Probab=43.65 E-value=47 Score=26.45 Aligned_cols=26 Identities=23% Similarity=0.323 Sum_probs=16.2
Q ss_pred CCCcEEEEccCccchhchHHHHHHHHHhC
Q 025054 25 KPVDVVISAVGRTEVEDQFKLIAAIKEVG 53 (258)
Q Consensus 25 ~g~d~Vi~~~~~~~~~~~~~li~aa~~~g 53 (258)
.++|.|+-+++.. .+..++.++.++|
T Consensus 36 ~~vDaVviatp~~---~H~e~a~~aL~aG 61 (229)
T TIGR03855 36 EDVDIVVEAASQE---AVKEYAEKILKNG 61 (229)
T ss_pred CCCCEEEECCChH---HHHHHHHHHHHCC
Confidence 4789998888764 2344445555555
No 375
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=43.43 E-value=38 Score=23.27 Aligned_cols=25 Identities=28% Similarity=0.318 Sum_probs=16.7
Q ss_pred CCcEEEEccCccchhchHHHHHHHHHhC
Q 025054 26 PVDVVISAVGRTEVEDQFKLIAAIKEVG 53 (258)
Q Consensus 26 g~d~Vi~~~~~~~~~~~~~li~aa~~~g 53 (258)
++|+|+-+++.. ....++..|.++|
T Consensus 62 ~~D~V~I~tp~~---~h~~~~~~~l~~g 86 (120)
T PF01408_consen 62 DVDAVIIATPPS---SHAEIAKKALEAG 86 (120)
T ss_dssp TESEEEEESSGG---GHHHHHHHHHHTT
T ss_pred cCCEEEEecCCc---chHHHHHHHHHcC
Confidence 689888777654 3555666666666
No 376
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=43.03 E-value=69 Score=28.15 Aligned_cols=58 Identities=16% Similarity=0.219 Sum_probs=39.7
Q ss_pred ccCceeEEeccCCCHHHHHHhhCC-CcEEEEccCccc----hhchHHHHHHHHHhCCccEEEcCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIKP-VDVVISAVGRTE----VEDQFKLIAAIKEVGNIKRFFPTE 62 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~~----~~~~~~li~aa~~~g~vk~~v~S~ 62 (258)
...|++++..|..|.+.+.++++. ...|+.. .+.+ +.-...|.+.|++.| +--++-..
T Consensus 124 ~~~G~~v~~vd~~d~~~l~~ai~~~tklV~ve-sp~NptG~v~dl~~I~~la~~~g-i~livD~a 186 (427)
T PRK05994 124 KSFGWQVRWADADDPASFERAITPRTKAIFIE-SIANPGGTVTDIAAIAEVAHRAG-LPLIVDNT 186 (427)
T ss_pred HhcCcEEEEECCCCHHHHHHhcCcCCeEEEEE-CCCCCCCeecCHHHHHHHHHHcC-CEEEEECC
Confidence 446889999999999999999975 4444432 2222 334568888899888 76555433
No 377
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=42.74 E-value=47 Score=24.04 Aligned_cols=20 Identities=15% Similarity=0.117 Sum_probs=10.3
Q ss_pred HHHHHHHHHhCCccEEEcCCC
Q 025054 43 FKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 43 ~~li~aa~~~g~vk~~v~S~~ 63 (258)
..++++|++.+ +.-+-.|++
T Consensus 42 e~~v~aa~~~~-adiVglS~l 61 (134)
T TIGR01501 42 EEFIKAAIETK-ADAILVSSL 61 (134)
T ss_pred HHHHHHHHHcC-CCEEEEecc
Confidence 44566666655 444444544
No 378
>cd03363 TOPRIM_TopoIA_TopoI TOPRIM_TopoIA_TopoI: The topoisomerase-primase (TORPIM) domain found in members of the type IA family of DNA topoisomerases (Topo IA) similar to Escherichia coli DNA topoisomerase I. Type IA DNA topoisomerases remove (relax) negative supercoils in the DNA by: cleaving one strand of the DNA duplex, covalently linking to the 5' phosphoryl end of the DNA break and, allowing the other strand of the duplex to pass through the gap. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). For topoisomerases the conserved glutamate is believed to act as a general base in strand joining and, as a general acid in strand cleavage. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function.
Probab=41.99 E-value=50 Score=23.37 Aligned_cols=46 Identities=24% Similarity=0.214 Sum_probs=29.2
Q ss_pred HHHHHhhCCCcEEEEccCccc--hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 18 ESLVKAIKPVDVVISAVGRTE--VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 18 ~~l~~al~g~d~Vi~~~~~~~--~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
..+++.++++|.||++..++. -.....+++.+....+|+|+-+|+.
T Consensus 64 ~~ik~l~~~~~eiiiAtD~drEGe~i~~~i~~~~~~~~~v~Rl~~ssl 111 (123)
T cd03363 64 KELKKLAKKADEIYLATDPDREGEAIAWHLAEVLKLKKNVKRVVFNEI 111 (123)
T ss_pred HHHHHHHhcCCEEEEcCCCCcchHHHHHHHHHHcCCCCCeEEEEEccC
Confidence 456667778999998887754 2223456666554334788877654
No 379
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=41.46 E-value=46 Score=26.98 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=27.8
Q ss_pred HHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 18 ESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 18 ~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
+++.+.++++|+|+.++.+. ....++.+|.++| + ++|.
T Consensus 52 ~dl~~ll~~~DvVid~t~p~---~~~~~~~~al~~G-~-~vvi 89 (257)
T PRK00048 52 DDLEAVLADADVLIDFTTPE---ATLENLEFALEHG-K-PLVI 89 (257)
T ss_pred CCHHHhccCCCEEEECCCHH---HHHHHHHHHHHcC-C-CEEE
Confidence 45667777899999888664 3466888888888 4 4553
No 380
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=41.30 E-value=23 Score=25.83 Aligned_cols=36 Identities=19% Similarity=0.195 Sum_probs=26.6
Q ss_pred cccCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc
Q 025054 2 LYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE 38 (258)
Q Consensus 2 l~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~ 38 (258)
|.+.|+++...+... .++.++.+.+|+|+.+++...
T Consensus 48 L~~~gatV~~~~~~t-~~l~~~v~~ADIVvsAtg~~~ 83 (140)
T cd05212 48 LQRDGATVYSCDWKT-IQLQSKVHDADVVVVGSPKPE 83 (140)
T ss_pred HHHCCCEEEEeCCCC-cCHHHHHhhCCEEEEecCCCC
Confidence 456678887777543 457788899999999888653
No 381
>TIGR02651 RNase_Z ribonuclease Z. Processing of the 3-prime end of tRNA precursors may be the result of endonuclease or exonuclease activity, and differs in different species. Member of this family are ribonuclease Z, a tRNA 3-prime endonuclease that processes tRNAs to prepare for addition of CCA. In species where all tRNA sequences already have the CCA tail, such as E. coli, the need for such an enzyme is unclear. Protein similar to the E. coli enzyme, matched by TIGR02649, are designated ribonuclease BN.
Probab=41.10 E-value=1e+02 Score=25.36 Aligned_cols=51 Identities=20% Similarity=0.242 Sum_probs=36.5
Q ss_pred EEeccCCCHHHHHHhhCCCcEEEEccCccch----------hchHHHHHHHHHhCCccEEEc
Q 025054 9 IAQGDLHDHESLVKAIKPVDVVISAVGRTEV----------EDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 9 ~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~----------~~~~~li~aa~~~g~vk~~v~ 60 (258)
++.+|-.-.+.+.+.++++|.+||=+....- -.....++.|++++ +|+++.
T Consensus 204 ~y~gDt~~~~~~~~~~~~~dlLi~E~~~~~~~~~~~~~~~H~t~~~a~~~~~~~~-~k~lvl 264 (299)
T TIGR02651 204 AYTGDTRPCEEVIEFAKNADLLIHEATFLDEDKKLAKEYGHSTAAQAAEIAKEAN-VKRLIL 264 (299)
T ss_pred EEecCCCChHHHHHHHcCCCEEEEECCCCchhHHHHhhcCCCCHHHHHHHHHHcC-CCEEEE
Confidence 4567876667788889999999987664320 11245677788888 999986
No 382
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=40.93 E-value=74 Score=27.39 Aligned_cols=59 Identities=17% Similarity=0.182 Sum_probs=39.4
Q ss_pred cCceeEEeccCCCHHHHHHhhCC-CcEEEEccCcc---chhchHHHHHHHHHhCCccEEEcCCC
Q 025054 4 MINCLIAQGDLHDHESLVKAIKP-VDVVISAVGRT---EVEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~---~~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
..|+++...|..|.+.+.++++. ...|+...... .+.-.+.+.+.|++.| +.-++-.++
T Consensus 116 ~~g~~v~~v~~~d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~g-i~livD~a~ 178 (380)
T TIGR01325 116 RFGIEVSFVDPTDLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIG-ALLVVDNVF 178 (380)
T ss_pred HhCCEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcC-CEEEEECCC
Confidence 45788888899899999998864 44555332221 1344577888888888 765554443
No 383
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=40.67 E-value=83 Score=27.44 Aligned_cols=58 Identities=21% Similarity=0.264 Sum_probs=39.7
Q ss_pred cCceeEEeccCCCHHHHHHhhCC-CcEEEEccCccc----hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 4 MINCLIAQGDLHDHESLVKAIKP-VDVVISAVGRTE----VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~~----~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
..|++++..|..|.+.+.++++. ...|+.+ .+.+ +.....|++.|++.| +--++-..+
T Consensus 122 ~~g~~v~~v~~~d~~~l~~~i~~~tklV~l~-~P~NPtG~v~dl~~I~~la~~~g-i~vIvD~a~ 184 (405)
T PRK08776 122 KGHFALITADLTDPRSLADALAQSPKLVLIE-TPSNPLLRITDLRFVIEAAHKVG-ALTVVDNTF 184 (405)
T ss_pred hcCcEEEEECCCCHHHHHHhcCcCCeEEEEE-CCCCCCCccCCHHHHHHHHHHcC-CEEEEECCC
Confidence 35788889999899999999864 4555443 2222 445677888888888 665554444
No 384
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=40.29 E-value=96 Score=27.42 Aligned_cols=60 Identities=13% Similarity=0.097 Sum_probs=38.9
Q ss_pred ccCceeEEecc-CCCHHHHHHhhCCCcEEEEccCccc----hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 3 YMINCLIAQGD-LHDHESLVKAIKPVDVVISAVGRTE----VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 3 ~~~gv~~~~~D-~~d~~~l~~al~g~d~Vi~~~~~~~----~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
...|++++..| ..|.+.+.++++.-..+|.+-.+.+ +.-...|.+.|++.| +.-+|-.++
T Consensus 130 ~~~Gi~v~~vdd~~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~g-i~liVD~t~ 194 (436)
T PRK07812 130 PKLGIEVSFVEDPDDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAG-VPLIVDNTI 194 (436)
T ss_pred hcCeEEEEEECCCCCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcC-CEEEEECCC
Confidence 44688888885 6788999998874333333322221 445577889999988 766554443
No 385
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=40.17 E-value=59 Score=27.45 Aligned_cols=34 Identities=21% Similarity=0.057 Sum_probs=25.2
Q ss_pred HHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHh
Q 025054 19 SLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEV 52 (258)
Q Consensus 19 ~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~ 52 (258)
...++++++|+||++++... +...+.+....++.
T Consensus 68 ~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~ 114 (324)
T TIGR01758 68 DPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKL 114 (324)
T ss_pred ChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 44688999999999998643 44556777777765
No 386
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function.
Probab=39.39 E-value=1.9e+02 Score=22.95 Aligned_cols=67 Identities=21% Similarity=0.291 Sum_probs=43.1
Q ss_pred CCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHhC
Q 025054 15 HDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEAE 93 (258)
Q Consensus 15 ~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~ 93 (258)
+|++..-..+.++|.+|...-.++ .+..|++-|+++| ++-+|. +..+. .......++.+.+.
T Consensus 40 d~pee~Lp~i~~~Dl~I~y~lHPD--l~~~l~~~~~e~g-~kavIvp~~~~~--------------~g~~~~lk~~~e~~ 102 (217)
T PF02593_consen 40 DDPEEYLPKIPEADLLIAYGLHPD--LTYELPEIAKEAG-VKAVIVPSESPK--------------PGLRRQLKKQLEEF 102 (217)
T ss_pred cChHHHccCCCCCCEEEEeccCch--hHHHHHHHHHHcC-CCEEEEecCCCc--------------cchHHHHHHHHHhc
Confidence 456655555889999987544332 5677888888899 998876 33222 12334566666666
Q ss_pred CCCeE
Q 025054 94 GIPHT 98 (258)
Q Consensus 94 ~~~~t 98 (258)
|+.+.
T Consensus 103 gi~~~ 107 (217)
T PF02593_consen 103 GIEVE 107 (217)
T ss_pred Cceee
Confidence 65544
No 387
>PLN02509 cystathionine beta-lyase
Probab=39.20 E-value=91 Score=27.84 Aligned_cols=59 Identities=12% Similarity=0.142 Sum_probs=39.6
Q ss_pred cCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc----hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 4 MINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE----VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~----~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
..|+++...|..|.+.+.++++.-..++.+..+.+ +.....|.+.|++.| +--++-.++
T Consensus 194 ~~G~~v~~vd~~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g-~~lIVD~A~ 256 (464)
T PLN02509 194 RSGVVVKRVNTTNLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQG-ALVLVDNSI 256 (464)
T ss_pred HCCeEEEEeCCCCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcC-CEEEEECCc
Confidence 46888999999999999999975333333222222 445567888888888 766654443
No 388
>PRK14837 undecaprenyl pyrophosphate synthase; Provisional
Probab=39.20 E-value=89 Score=24.96 Aligned_cols=78 Identities=18% Similarity=0.160 Sum_probs=47.9
Q ss_pred ceEeccCCCceeeeeccchHHHHHHHHhcCCC-CCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHH
Q 025054 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQ 203 (258)
Q Consensus 125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 203 (258)
++.+.|+-+ . -.+++.+.+..+.+..+ ..+-.++++ -..-+-.|+++++.++.........++++.+.+.+.
T Consensus 95 rvr~iGd~~----~-Lp~~l~~~i~~~e~~T~~n~~~~Lnia--~~Yggr~EI~~A~~~~~~~~~~~~~i~e~~~~~~L~ 167 (230)
T PRK14837 95 KIIVSGDIE----S-LSEEVKKSIKDAISFTKNFDGLVLNLA--INYGGRNEIVRAVKKFLSSGLDLETLNENVFSKFLD 167 (230)
T ss_pred EEEEEcChh----h-CCHHHHHHHHHHHHHhcCCCCcEEEEE--ecCCCHHHHHHHHHHHHhcCCChhhCCHHHHHHhhc
Confidence 355666532 1 24566777766655432 245577777 335667899999988875445556777777777665
Q ss_pred hccCcc
Q 025054 204 DASNED 209 (258)
Q Consensus 204 ~~~~~~ 209 (258)
..++|+
T Consensus 168 ~~~~p~ 173 (230)
T PRK14837 168 NPELPD 173 (230)
T ss_pred cCCCCC
Confidence 544543
No 389
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=39.17 E-value=30 Score=26.08 Aligned_cols=36 Identities=28% Similarity=0.345 Sum_probs=26.3
Q ss_pred cccCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc
Q 025054 2 LYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE 38 (258)
Q Consensus 2 l~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~ 38 (258)
|...|+++...+.+ .+.+.+.++.+|+||++++...
T Consensus 64 L~~~g~~V~v~~r~-~~~l~~~l~~aDiVIsat~~~~ 99 (168)
T cd01080 64 LLNRNATVTVCHSK-TKNLKEHTKQADIVIVAVGKPG 99 (168)
T ss_pred HhhCCCEEEEEECC-chhHHHHHhhCCEEEEcCCCCc
Confidence 45667776666654 4567788999999999988754
No 390
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=38.61 E-value=1e+02 Score=27.16 Aligned_cols=59 Identities=15% Similarity=0.063 Sum_probs=39.6
Q ss_pred cCceeEEeccCCCHHHHHHhhCC-CcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 4 MINCLIAQGDLHDHESLVKAIKP-VDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
..|+++...|..|.+.+.++++. ...|+....... +.....+.+.|++.+ +.-++-.++
T Consensus 120 ~~gi~v~~~d~~d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~-i~vVvD~a~ 182 (425)
T PRK06084 120 RIGIETRFAAHDDIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHG-VPLIVDNTV 182 (425)
T ss_pred cceeEEEEECCCCHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcC-CEEEEECCC
Confidence 35788888888899999999874 555554322111 334578888899888 766654443
No 391
>PF02608 Bmp: Basic membrane protein; InterPro: IPR003760 This is a family of basic membrane lipoproteins from Borrelia and various putative lipoproteins from other bacteria. All of these proteins are outer membrane proteins and are thus antigenic in nature when possessed by the pathogenic members of the family []. The Bacillus subtilis degR, a positive regulator of the production of degradative enzymes, is also a member of this group [].; GO: 0005886 plasma membrane; PDB: 2HQB_A 3S99_A 2FQW_A 2FQY_A 2FQX_A.
Probab=38.59 E-value=87 Score=26.03 Aligned_cols=41 Identities=27% Similarity=0.414 Sum_probs=27.7
Q ss_pred eccCCCHHHHHHhh-----CCCcEEEEccCccchhchHHHHHHHHHhCCcc
Q 025054 11 QGDLHDHESLVKAI-----KPVDVVISAVGRTEVEDQFKLIAAIKEVGNIK 56 (258)
Q Consensus 11 ~~D~~d~~~l~~al-----~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk 56 (258)
.+++.|++.-.++- +|+|+|+++++.. ...++++|++.| ..
T Consensus 168 ~gs~~D~~~~~~~a~~li~~GaDvI~~~ag~~----~~gv~~aa~e~g-~~ 213 (306)
T PF02608_consen 168 TGSFNDPAKAKEAAEALIDQGADVIFPVAGGS----GQGVIQAAKEAG-VY 213 (306)
T ss_dssp -SSSS-HHHHHHHHHHHHHTT-SEEEEE-CCC----HHHHHHHHHHHT-HE
T ss_pred cCCcCchHHHHHHHHHHhhcCCeEEEECCCCC----chHHHHHHHHcC-Cc
Confidence 56788876433322 4999999988864 677999999999 66
No 392
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=38.56 E-value=90 Score=25.90 Aligned_cols=46 Identities=24% Similarity=0.252 Sum_probs=31.9
Q ss_pred cCCCHHHHHHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCccEEE
Q 025054 13 DLHDHESLVKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNIKRFF 59 (258)
Q Consensus 13 D~~d~~~l~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~vk~~v 59 (258)
.++-.+.|..+++|+|+|+--++.+. ....+.+..|+.++- .+-.|
T Consensus 83 g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~c-P~A~i 141 (345)
T KOG1494|consen 83 GFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCC-PNALI 141 (345)
T ss_pred ccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhC-cccee
Confidence 34456799999999999998888653 344567777776653 34333
No 393
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=38.50 E-value=1.2e+02 Score=21.52 Aligned_cols=49 Identities=24% Similarity=0.365 Sum_probs=34.2
Q ss_pred eeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 7 CLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
++.+..++ +.+.+.+.++++|.||.+.... .....+.+.|++.+ . .+|.
T Consensus 74 v~~~~~~~-~~~~~~~~~~~~d~vi~~~d~~--~~~~~l~~~~~~~~-~-p~i~ 122 (135)
T PF00899_consen 74 VEAIPEKI-DEENIEELLKDYDIVIDCVDSL--AARLLLNEICREYG-I-PFID 122 (135)
T ss_dssp EEEEESHC-SHHHHHHHHHTSSEEEEESSSH--HHHHHHHHHHHHTT---EEEE
T ss_pred eeeeeccc-ccccccccccCCCEEEEecCCH--HHHHHHHHHHHHcC-C-CEEE
Confidence 34444555 5667788889999999987653 34556778899988 4 5665
No 394
>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B ....
Probab=38.01 E-value=44 Score=28.46 Aligned_cols=48 Identities=17% Similarity=0.155 Sum_probs=32.6
Q ss_pred CCHHHHHHhhC--CCcEEEEccCccc--------------------hhchHHHHHHHHHhCCccEEEc-CCC
Q 025054 15 HDHESLVKAIK--PVDVVISAVGRTE--------------------VEDQFKLIAAIKEVGNIKRFFP-TEY 63 (258)
Q Consensus 15 ~d~~~l~~al~--g~d~Vi~~~~~~~--------------------~~~~~~li~aa~~~g~vk~~v~-S~~ 63 (258)
.|++.+.++++ |+-.|+.++-.++ .+..+-+++||++.| +|.-++ |..
T Consensus 91 fD~dqW~~~ak~aGakY~VlTakHHDGF~LW~S~~t~~~v~~~~~krDiv~El~~A~rk~G-lk~G~Y~S~~ 161 (346)
T PF01120_consen 91 FDADQWAKLAKDAGAKYVVLTAKHHDGFCLWPSKYTDYNVVNSGPKRDIVGELADACRKYG-LKFGLYYSPW 161 (346)
T ss_dssp --HHHHHHHHHHTT-SEEEEEEE-TT--BSS--TT-SSBGGGGGGTS-HHHHHHHHHHHTT--EEEEEEESS
T ss_pred CCHHHHHHHHHHcCCCEEEeehhhcCccccCCCCCCcccccCCCCCCCHHHHHHHHHHHcC-CeEEEEecch
Confidence 37888888887 7787776663221 456788999999999 999888 654
No 395
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=37.89 E-value=1.2e+02 Score=25.74 Aligned_cols=49 Identities=18% Similarity=0.276 Sum_probs=34.2
Q ss_pred eeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEE
Q 025054 7 CLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFF 59 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v 59 (258)
++.+..|++ .+.+.+.++++|.||.+.... .....+-++|.+.+ ++.+.
T Consensus 98 i~~~~~~~~-~~~~~~~~~~~DlVid~~D~~--~~r~~in~~~~~~~-ip~i~ 146 (338)
T PRK12475 98 IVPVVTDVT-VEELEELVKEVDLIIDATDNF--DTRLLINDLSQKYN-IPWIY 146 (338)
T ss_pred EEEEeccCC-HHHHHHHhcCCCEEEEcCCCH--HHHHHHHHHHHHcC-CCEEE
Confidence 444556664 567788899999999998653 33345667888888 66544
No 396
>PF01751 Toprim: Toprim domain; InterPro: IPR006171 This is a conserved region from DNA primase. This corresponds to the Toprim (topoisomerase-primase) domain common to DnaG primases, topoisomerases, OLD family nucleases and RecR/M DNA repair proteins []. Both DnaG motifs IV and V are present in the alignment, the DxD (V) motif may be involved in Mg2+ binding and mutations to the conserved glutamate (IV) completely abolish DnaG type primase activity. DNA primase 2.7.7.6 from EC is a nucleotidyltransferase it synthesizes the oligoribonucleotide primers required for DNA replication on the lagging strand of the replication fork; it can also prime the leading stand and has been implicated in cell division []. This family also includes the atypical archaeal A subunit from type II DNA topoisomerases []. Type II DNA topoisomerases catalyse the relaxation of DNA supercoiling by causing transient double strand breaks.; PDB: 2ZJT_A 3IG0_A 3M4I_A 3NUH_B 1GKU_B 1GL9_C 3PWT_A 1CY4_A 1ECL_A 1CY7_A ....
Probab=37.46 E-value=59 Score=21.80 Aligned_cols=46 Identities=22% Similarity=0.257 Sum_probs=29.3
Q ss_pred HHHHHHhhCCCcEEEEccCccc--hhchHHHHHHHHHhCC--ccEEEcCC
Q 025054 17 HESLVKAIKPVDVVISAVGRTE--VEDQFKLIAAIKEVGN--IKRFFPTE 62 (258)
Q Consensus 17 ~~~l~~al~g~d~Vi~~~~~~~--~~~~~~li~aa~~~g~--vk~~v~S~ 62 (258)
.+.|.+.++++|.||.++.++. -.....+++.+...+. ++|+-+|+
T Consensus 50 i~~l~~~~~~~~~iiiatD~D~EGe~Ia~~i~~~~~~~~~~~~~R~~~~~ 99 (100)
T PF01751_consen 50 IKNLKKLLKKADEIIIATDPDREGELIAWEIIELLGKNNPKLIKRVWFSS 99 (100)
T ss_dssp HHHHHHHHHSCSEEEEEC-SSHHHHHHHHHHHHHHHHHSHHHTTEEEEES
T ss_pred chhhHHHhhhccEeeecCCCChHHHHHHHHHHHHHhHhCCCcCCEEEEec
Confidence 4567777778899888887764 3345567777766552 26665543
No 397
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=37.21 E-value=75 Score=22.83 Aligned_cols=18 Identities=6% Similarity=0.006 Sum_probs=8.5
Q ss_pred HHHHHHHHhCCccEEEcCC
Q 025054 44 KLIAAIKEVGNIKRFFPTE 62 (258)
Q Consensus 44 ~li~aa~~~g~vk~~v~S~ 62 (258)
.++++|++.+ +..++.|+
T Consensus 44 ~~v~aa~e~~-adii~iSs 61 (132)
T TIGR00640 44 EIARQAVEAD-VHVVGVSS 61 (132)
T ss_pred HHHHHHHHcC-CCEEEEcC
Confidence 3455555554 44444443
No 398
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=36.95 E-value=95 Score=21.43 Aligned_cols=52 Identities=21% Similarity=0.168 Sum_probs=30.1
Q ss_pred cccCceeEEeccC-CCHHHHHHhhC--CCcEEEE-ccCccchhchHHHHHHHHHhC
Q 025054 2 LYMINCLIAQGDL-HDHESLVKAIK--PVDVVIS-AVGRTEVEDQFKLIAAIKEVG 53 (258)
Q Consensus 2 l~~~gv~~~~~D~-~d~~~l~~al~--g~d~Vi~-~~~~~~~~~~~~li~aa~~~g 53 (258)
|+..|.+++..+. ..++.+.+++. ++|+|.. +.........+.+++++++.+
T Consensus 23 l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~ 78 (119)
T cd02067 23 LRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAG 78 (119)
T ss_pred HHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcC
Confidence 4566777765332 24455555544 5676643 332444666677888887765
No 399
>TIGR03450 mycothiol_INO1 inositol 1-phosphate synthase, Actinobacterial type. This enzyme, inositol 1-phosphate synthase as found in Actinobacteria, produces an essential precursor for several different products, including mycothiol, which is a glutathione analog, and phosphatidylinositol, which is a phospholipid.
Probab=36.84 E-value=1.3e+02 Score=25.67 Aligned_cols=40 Identities=23% Similarity=0.226 Sum_probs=31.7
Q ss_pred HHHHHHhhC--CCcEEEEccCccchhchHHHHHHHHHhCCccE
Q 025054 17 HESLVKAIK--PVDVVISAVGRTEVEDQFKLIAAIKEVGNIKR 57 (258)
Q Consensus 17 ~~~l~~al~--g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~ 57 (258)
++++.+.|+ ++|++++..+...-+.++--+.||.++| |.-
T Consensus 112 ~~dv~~~lk~~~~dVlvnylPvGs~~A~~~YA~AAl~aG-~af 153 (351)
T TIGR03450 112 PVDVVQALKDAKVDVLVSYLPVGSEEADKFYAQCAIDAG-VAF 153 (351)
T ss_pred HHHHHHHHHhcCCCEEEECCccchHHHHHHHHHHHHHcC-Cce
Confidence 557777887 6899999887666667788888999999 653
No 400
>TIGR03859 PQQ_PqqD coenzyme PQQ biosynthesis protein PqqD. This model identifies PqqD, a protein involved in the final steps of the biosynthesis of pyrroloquinoline quinone, coenzyme PQQ.
Probab=36.50 E-value=88 Score=20.21 Aligned_cols=53 Identities=17% Similarity=0.103 Sum_probs=37.3
Q ss_pred eeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHhc
Q 025054 137 IFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQDA 205 (258)
Q Consensus 137 ~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 205 (258)
.++..+++|.++..+++. ..|..|+++.+.+.++. .....-...+|...+.+.
T Consensus 25 ~~~~Ln~~g~~Iw~lldg---------------~~tv~eI~~~L~~~Y~~-~e~~~~dV~~fL~~L~~~ 77 (81)
T TIGR03859 25 GMVKLNDSAGEILELCDG---------------KRSLAEIIQELAQRFPA-AEEIEDDVIAFLAVARAK 77 (81)
T ss_pred ceeeeChHHHHHHHHccC---------------CCcHHHHHHHHHHHcCC-hhhHHHHHHHHHHHHHHC
Confidence 378999999999998864 34788999999998876 443333444555555443
No 401
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=36.43 E-value=97 Score=27.13 Aligned_cols=59 Identities=17% Similarity=0.165 Sum_probs=39.9
Q ss_pred cCceeEEeccCCCHHHHHHhhCC-CcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 4 MINCLIAQGDLHDHESLVKAIKP-VDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
..|++++..|..|.+.+.+++++ ...|+....... +.-.+.|.+.|++.| +--++-..+
T Consensus 119 ~~G~~v~~v~~~d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~-i~livD~t~ 181 (418)
T TIGR01326 119 RLGIEVRFVDPDDPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHG-VPLIVDNTF 181 (418)
T ss_pred HcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcC-CEEEEECCC
Confidence 46888888888899999999874 555543322111 334578888899888 765554444
No 402
>PF04723 GRDA: Glycine reductase complex selenoprotein A; InterPro: IPR006812 Found in clostridia, this protein contains one active site selenocysteine and catalyses the reductive deamination of glycine, which is coupled to the esterification of orthophosphate resulting in the formation of ATP []. A member of this family may also exist in Treponema denticola [].; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=36.39 E-value=1.2e+02 Score=22.06 Aligned_cols=50 Identities=20% Similarity=0.327 Sum_probs=35.2
Q ss_pred EEeccCCC--HHHHHHhhC--CCcEEEEccCc--------cchhchHHHHHHHHHhCCccEEE
Q 025054 9 IAQGDLHD--HESLVKAIK--PVDVVISAVGR--------TEVEDQFKLIAAIKEVGNIKRFF 59 (258)
Q Consensus 9 ~~~~D~~d--~~~l~~al~--g~d~Vi~~~~~--------~~~~~~~~li~aa~~~g~vk~~v 59 (258)
++.||.+- -.++.+.++ |+++||+.+-. .+.+-++++-+++.+.| .+.+|
T Consensus 9 iiiGdRDGiPgpAie~c~~~~gaevvfs~TeCFVctaagaMDLEnQ~rvk~~aEk~g-~enlv 70 (150)
T PF04723_consen 9 IIIGDRDGIPGPAIEECVKTAGAEVVFSSTECFVCTAAGAMDLENQQRVKDLAEKYG-AENLV 70 (150)
T ss_pred EEEecCCCCCcHHHHHHHHhcCceEEEEeeeEEEecccccccHHHHHHHHHHHHhcC-CccEE
Confidence 45677763 346777776 67888765432 23788999999999999 66554
No 403
>PRK06720 hypothetical protein; Provisional
Probab=36.10 E-value=56 Score=24.51 Aligned_cols=58 Identities=14% Similarity=0.126 Sum_probs=27.5
Q ss_pred ccCceeEEeccCCCHHHHHH---hhC--CCcEEEEccCccchhchHHHHHHHHH-hCCccEEEcC
Q 025054 3 YMINCLIAQGDLHDHESLVK---AIK--PVDVVISAVGRTEVEDQFKLIAAIKE-VGNIKRFFPT 61 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~---al~--g~d~Vi~~~~~~~~~~~~~li~aa~~-~g~vk~~v~S 61 (258)
.+.|.+++..|.+. +.+.+ .+. +.+..+...........+.+++.+.+ .|.+..+|.+
T Consensus 37 ~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnn 100 (169)
T PRK06720 37 AKQGAKVIVTDIDQ-ESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQN 100 (169)
T ss_pred HHCCCEEEEEECCH-HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 34567777777543 22222 221 33433333333334445556665443 3446666663
No 404
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=35.87 E-value=1.5e+02 Score=25.93 Aligned_cols=61 Identities=21% Similarity=0.171 Sum_probs=44.3
Q ss_pred cccCceeEEeccCCCHHHHHHhhC--CCcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 2 LYMINCLIAQGDLHDHESLVKAIK--PVDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 2 l~~~gv~~~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
|+..|+++...|-.+.+.+.+++. +.+.||.=.+..+ +.--..+.+.|++.| +.-+|-.+|
T Consensus 123 l~~~gi~~~~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g-~~vvVDNTf 188 (396)
T COG0626 123 LQKFGVEVTFVDPGDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYG-ALVVVDNTF 188 (396)
T ss_pred HHhcCeEEEEECCCChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcC-CEEEEECCc
Confidence 456789999999888877777765 5777766554433 556678999999998 777775444
No 405
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=35.81 E-value=44 Score=26.59 Aligned_cols=18 Identities=28% Similarity=0.377 Sum_probs=9.9
Q ss_pred HHHHhhCCCcEEEEccCc
Q 025054 19 SLVKAIKPVDVVISAVGR 36 (258)
Q Consensus 19 ~l~~al~g~d~Vi~~~~~ 36 (258)
.+.+.++++|+|||+++.
T Consensus 74 ~l~~~~~~~DivIh~AAv 91 (229)
T PRK06732 74 TLEPLVKDHDVLIHSMAV 91 (229)
T ss_pred HHHHHhcCCCEEEeCCcc
Confidence 344445556666666654
No 406
>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway. Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D ....
Probab=35.72 E-value=84 Score=21.62 Aligned_cols=36 Identities=22% Similarity=0.280 Sum_probs=19.4
Q ss_pred HHHhhC--CCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 20 LVKAIK--PVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 20 l~~al~--g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
+.+.++ +.|+||-+++... ....+..+.++| +++|.
T Consensus 51 ~~~~~~~~~~dvvVE~t~~~~---~~~~~~~~L~~G--~~VVt 88 (117)
T PF03447_consen 51 LEELIDDPDIDVVVECTSSEA---VAEYYEKALERG--KHVVT 88 (117)
T ss_dssp HHHHHTHTT-SEEEE-SSCHH---HHHHHHHHHHTT--CEEEE
T ss_pred HHHHhcCcCCCEEEECCCchH---HHHHHHHHHHCC--CeEEE
Confidence 344455 7899999966532 334555555566 45554
No 407
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=35.48 E-value=76 Score=21.81 Aligned_cols=52 Identities=29% Similarity=0.243 Sum_probs=34.4
Q ss_pred cccCceeEEeccCC-CHHHHHHhhC--CCcEEEEcc-CccchhchHHHHHHHHHhC
Q 025054 2 LYMINCLIAQGDLH-DHESLVKAIK--PVDVVISAV-GRTEVEDQFKLIAAIKEVG 53 (258)
Q Consensus 2 l~~~gv~~~~~D~~-d~~~l~~al~--g~d~Vi~~~-~~~~~~~~~~li~aa~~~g 53 (258)
|++.|.++...|.+ +.+.+.+.++ +.|.|.-.+ ..........+++.+++..
T Consensus 24 l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS~~~~~~~~~~~~l~~~~k~~~ 79 (121)
T PF02310_consen 24 LRKAGHEVDILDANVPPEELVEALRAERPDVVGISVSMTPNLPEAKRLARAIKERN 79 (121)
T ss_dssp HHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEEEESSSTHHHHHHHHHHHHHTTC
T ss_pred HHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEEEccCcCcHHHHHHHHHHHHhcC
Confidence 55678888777765 3566666554 678874433 4445667788888877764
No 408
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=35.47 E-value=66 Score=26.19 Aligned_cols=31 Identities=16% Similarity=0.263 Sum_probs=18.0
Q ss_pred HHHhhCCCcEEEEccCccchhchHHHHHHHHHhC
Q 025054 20 LVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVG 53 (258)
Q Consensus 20 l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g 53 (258)
+.+.+.++|.|+.+++... ...++..+.++|
T Consensus 55 ~~ell~~~DvVvi~a~~~~---~~~~~~~al~~G 85 (265)
T PRK13304 55 IDELVEDVDLVVECASVNA---VEEVVPKSLENG 85 (265)
T ss_pred HHHHhcCCCEEEEcCChHH---HHHHHHHHHHcC
Confidence 4444578999998876532 233344444455
No 409
>PRK06234 methionine gamma-lyase; Provisional
Probab=35.37 E-value=1.5e+02 Score=25.79 Aligned_cols=60 Identities=17% Similarity=0.110 Sum_probs=39.1
Q ss_pred ccCceeEEeccCCCHHHHHHhhCC-CcEEEEccCccc---hhchHHHHHHHHHh--CCccEEEcCCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIKP-VDVVISAVGRTE---VEDQFKLIAAIKEV--GNIKRFFPTEY 63 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~~---~~~~~~li~aa~~~--g~vk~~v~S~~ 63 (258)
+..|+++...|..|.+.+.++++. ...|+....... +.....|.+.|++. | +--++-.++
T Consensus 125 ~~~G~~v~~vd~~d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~-i~livDea~ 190 (400)
T PRK06234 125 TRYGVEVTFVDTSNLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKE-CLVFVDNTF 190 (400)
T ss_pred hhCCeEEEEECCCCHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCC-CEEEEECCC
Confidence 457899999999999999999864 455553322211 34467788888886 5 544443443
No 410
>PRK09620 hypothetical protein; Provisional
Probab=35.26 E-value=30 Score=27.56 Aligned_cols=29 Identities=24% Similarity=0.343 Sum_probs=19.3
Q ss_pred EeccCCCHHHHHHhhC--CCcEEEEccCccc
Q 025054 10 AQGDLHDHESLVKAIK--PVDVVISAVGRTE 38 (258)
Q Consensus 10 ~~~D~~d~~~l~~al~--g~d~Vi~~~~~~~ 38 (258)
+.++.+..+.+.++++ ++|+|||+|+..+
T Consensus 69 V~s~~d~~~~l~~~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 69 FEGIIDLQDKMKSIITHEKVDAVIMAAAGSD 99 (229)
T ss_pred EecHHHHHHHHHHHhcccCCCEEEECccccc
Confidence 3443333456777774 6899999998754
No 411
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=34.57 E-value=1e+02 Score=26.77 Aligned_cols=51 Identities=20% Similarity=0.221 Sum_probs=34.4
Q ss_pred CCHHHHHHhhC---CCcEEE--EccCccc-hhchHHHHHHHHHhCCccEEEc--CCCCCC
Q 025054 15 HDHESLVKAIK---PVDVVI--SAVGRTE-VEDQFKLIAAIKEVGNIKRFFP--TEYGSN 66 (258)
Q Consensus 15 ~d~~~l~~al~---g~d~Vi--~~~~~~~-~~~~~~li~aa~~~g~vk~~v~--S~~~~~ 66 (258)
-|++.+.++|+ +++.|. |+=.+.. ..-.+.|.++|++.| ..-+|- |++|+.
T Consensus 117 v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g-~l~iVDaVsS~Gg~ 175 (383)
T COG0075 117 VDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHG-ALLIVDAVSSLGGE 175 (383)
T ss_pred CCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcC-CEEEEEecccCCCc
Confidence 48999999998 345543 3322222 445678999999998 666664 777763
No 412
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=34.33 E-value=1.4e+02 Score=26.02 Aligned_cols=58 Identities=16% Similarity=0.049 Sum_probs=38.8
Q ss_pred cCceeEEeccCCCHHHHHHhhC-CCcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCC
Q 025054 4 MINCLIAQGDLHDHESLVKAIK-PVDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTE 62 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~-g~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~ 62 (258)
..|+++...|..|.+.+.++++ +...|+...+... +.....|.+.|++.| +.-++-..
T Consensus 127 ~~G~~v~~vd~~d~e~l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~g-i~lvvD~a 188 (398)
T PRK07504 127 RYGIESTLVDGLDLDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQAG-AKLVVDNV 188 (398)
T ss_pred hcCeEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHcC-CEEEEECC
Confidence 4588888888888999999986 4455543332211 334577888888888 76555343
No 413
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=33.77 E-value=1.4e+02 Score=25.41 Aligned_cols=49 Identities=24% Similarity=0.345 Sum_probs=34.5
Q ss_pred eeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEE
Q 025054 7 CLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFF 59 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v 59 (258)
++.+..+++ .+.+.+.++++|.|+.+.... .....+.++|.+.+ +..+.
T Consensus 98 v~~~~~~~~-~~~~~~~~~~~DlVid~~Dn~--~~r~~ln~~~~~~~-iP~i~ 146 (339)
T PRK07688 98 VEAIVQDVT-AEELEELVTGVDLIIDATDNF--ETRFIVNDAAQKYG-IPWIY 146 (339)
T ss_pred EEEEeccCC-HHHHHHHHcCCCEEEEcCCCH--HHHHHHHHHHHHhC-CCEEE
Confidence 445556664 566778899999999987643 34556778888888 66443
No 414
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=33.69 E-value=1.5e+02 Score=25.74 Aligned_cols=59 Identities=17% Similarity=0.122 Sum_probs=39.3
Q ss_pred cCceeEEeccCCCHHHHHHhhC-CCcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 4 MINCLIAQGDLHDHESLVKAIK-PVDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~-g~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
..|+++...|..|.+.+.++++ +.+.|+.+.+... +.-...+.+.|++.| +.-++-.++
T Consensus 115 ~~gi~v~~vd~~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~g-i~vIvDea~ 177 (388)
T PRK08861 115 KGDFKVQFVDQSDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVG-ALVAVDNTF 177 (388)
T ss_pred cCCeEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcC-CEEEEECCc
Confidence 3468888888889999999886 4566654433221 334567888888888 655553444
No 415
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=33.02 E-value=1.1e+02 Score=25.49 Aligned_cols=58 Identities=16% Similarity=0.155 Sum_probs=38.5
Q ss_pred ccCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc------hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE------VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~------~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
+..|++++..+ |.+.+.+++++...|+.+.+... ...-+.+++.|++.| +--++-..+
T Consensus 104 ~~~g~~~~~~~--d~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~-~~ii~De~y 167 (330)
T TIGR01140 104 RAAGHEVVELP--DLDRLPAALEELDVLVLCNPNNPTGRLIPPETLLALAARLRARG-GWLVVDEAF 167 (330)
T ss_pred HHcCCEEEEeC--CHHHHHhhcccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcC-CEEEEECcc
Confidence 45678888777 88889999888776654433211 456678889998888 543332333
No 416
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=32.91 E-value=35 Score=25.55 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=24.2
Q ss_pred cccCceeEEeccCCCHHHHHHhhCCCcEEEEccCccc
Q 025054 2 LYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRTE 38 (258)
Q Consensus 2 l~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~ 38 (258)
|...|+.+...+... ..+.+.++.+|+||.+++...
T Consensus 56 L~~~~atVt~~h~~T-~~l~~~~~~ADIVVsa~G~~~ 91 (160)
T PF02882_consen 56 LLNKGATVTICHSKT-KNLQEITRRADIVVSAVGKPN 91 (160)
T ss_dssp HHHTT-EEEEE-TTS-SSHHHHHTTSSEEEE-SSSTT
T ss_pred HHhCCCeEEeccCCC-CcccceeeeccEEeeeecccc
Confidence 456677777777643 557778889999999888654
No 417
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=32.80 E-value=1.8e+02 Score=20.71 Aligned_cols=49 Identities=24% Similarity=0.303 Sum_probs=32.8
Q ss_pred EeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEcCC
Q 025054 10 AQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTE 62 (258)
Q Consensus 10 ~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S~ 62 (258)
+..++.+ +...+.+++.|+||.+... ......+.++|++.+ +..+....
T Consensus 74 ~~~~~~~-~~~~~~~~~~diVi~~~d~--~~~~~~l~~~~~~~~-i~~i~~~~ 122 (143)
T cd01483 74 VPEGISE-DNLDDFLDGVDLVIDAIDN--IAVRRALNRACKELG-IPVIDAGG 122 (143)
T ss_pred EeeecCh-hhHHHHhcCCCEEEECCCC--HHHHHHHHHHHHHcC-CCEEEEcC
Confidence 3444433 3346778899999998876 345677889999988 55444333
No 418
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=32.55 E-value=89 Score=24.66 Aligned_cols=47 Identities=19% Similarity=0.353 Sum_probs=32.3
Q ss_pred cccCceeEEeccCC--CHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhC
Q 025054 2 LYMINCLIAQGDLH--DHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVG 53 (258)
Q Consensus 2 l~~~gv~~~~~D~~--d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g 53 (258)
|++.|+++...++. +.+.++..+..+|+|+-..|- +.+|+...++.|
T Consensus 58 l~~lg~~v~~L~l~~~~~~~Ie~~l~~~d~IyVgGGN-----TF~LL~~lke~g 106 (224)
T COG3340 58 LAKLGLEVSELHLSKPPLAAIENKLMKADIIYVGGGN-----TFNLLQELKETG 106 (224)
T ss_pred HHHcCCeeeeeeccCCCHHHHHHhhhhccEEEECCch-----HHHHHHHHHHhC
Confidence 56788888888875 567888888889999866554 334444444444
No 419
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=32.24 E-value=87 Score=22.96 Aligned_cols=36 Identities=25% Similarity=0.380 Sum_probs=26.1
Q ss_pred cccCceeEEeccCCC--HHHHHHhhCCCcEEEEccCcc
Q 025054 2 LYMINCLIAQGDLHD--HESLVKAIKPVDVVISAVGRT 37 (258)
Q Consensus 2 l~~~gv~~~~~D~~d--~~~l~~al~g~d~Vi~~~~~~ 37 (258)
+++.|+++...|+.+ .+.+.+.+..+|+|+..-+..
T Consensus 9 f~~~g~~v~~l~~~~~~~~~~~~~i~~ad~I~~~GG~~ 46 (154)
T PF03575_consen 9 FRKLGFEVDQLDLSDRNDADILEAIREADAIFLGGGDT 46 (154)
T ss_dssp HHHCT-EEEECCCTSCGHHHHHHHHHHSSEEEE--S-H
T ss_pred HHHCCCEEEEEeccCCChHHHHHHHHhCCEEEECCCCH
Confidence 466889988888875 568888899999999887764
No 420
>PRK14840 undecaprenyl pyrophosphate synthase; Provisional
Probab=31.95 E-value=1.5e+02 Score=23.97 Aligned_cols=78 Identities=18% Similarity=0.138 Sum_probs=44.9
Q ss_pred ceEeccCCCceeeeeccchHHHHHHHHhcCCC-CCCceEEEcCCCCccCHHHHHHHHHHHh----CCcceeEecCHHHHH
Q 025054 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYLRPPKNIYSFKELVALWEKKI----GKTLEKIYVTEDQIL 199 (258)
Q Consensus 125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l~g~~~~~t~~e~~~~~~~~~----g~~~~~~~~~~~~~~ 199 (258)
++.+.|+-+ . -.+++...+..+-+..+ ..+-.++++- ..-+-.|+++++.++. ...+....++.+.+.
T Consensus 111 rvr~iGd~~----~-Lp~~l~~~i~~~e~~T~~~~~~~Lnla~--~Yggr~EI~~A~~~~~~~v~~~~~~~~~i~~~~i~ 183 (250)
T PRK14840 111 RLRCIGDLS----K-LPQELQNNIEQASSATAHYSRMELVLAI--NYGGKDELVRAFKKLHQDLANKKISSDDISEELIS 183 (250)
T ss_pred EEEEEeChh----h-CCHHHHHHHHHHHHHhccCCceEEEEEe--cCCcHHHHHHHHHHHHHHHHhCCCChhhCCHHHHH
Confidence 356666522 1 23466666666554432 2455778873 3666778888877765 223455567777666
Q ss_pred HHHHhccCcc
Q 025054 200 QMIQDASNED 209 (258)
Q Consensus 200 ~~~~~~~~~~ 209 (258)
+.+...++|+
T Consensus 184 ~~L~~~~~pd 193 (250)
T PRK14840 184 SYLDTSGLPD 193 (250)
T ss_pred HHhccCCCCC
Confidence 6665444443
No 421
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=31.82 E-value=1.7e+02 Score=20.33 Aligned_cols=50 Identities=18% Similarity=0.363 Sum_probs=30.8
Q ss_pred CCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHhCCCC
Q 025054 25 KPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEAEGIP 96 (258)
Q Consensus 25 ~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~~~~ 96 (258)
..+|.++.+.+.. ....+++.|.+.| ++.++. ++ ....++.+.+++.|+.
T Consensus 54 ~~iDlavv~~~~~---~~~~~v~~~~~~g-~~~v~~~~g------------------~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 54 EPIDLAVVCVPPD---KVPEIVDEAAALG-VKAVWLQPG------------------AESEELIEAAREAGIR 104 (116)
T ss_dssp ST-SEEEE-S-HH---HHHHHHHHHHHHT--SEEEE-TT------------------S--HHHHHHHHHTT-E
T ss_pred CCCCEEEEEcCHH---HHHHHHHHHHHcC-CCEEEEEcc------------------hHHHHHHHHHHHcCCE
Confidence 4678887777654 4667888999999 999887 54 1114566677776655
No 422
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=31.77 E-value=86 Score=25.93 Aligned_cols=19 Identities=21% Similarity=0.471 Sum_probs=14.8
Q ss_pred HHHHHhhCCCcEEEEccCc
Q 025054 18 ESLVKAIKPVDVVISAVGR 36 (258)
Q Consensus 18 ~~l~~al~g~d~Vi~~~~~ 36 (258)
+++.+.++++|+||++++.
T Consensus 201 ~~l~~~l~~aDiVint~P~ 219 (287)
T TIGR02853 201 NKLEEKVAEIDIVINTIPA 219 (287)
T ss_pred HHHHHHhccCCEEEECCCh
Confidence 3566778899999998764
No 423
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=30.89 E-value=1.5e+02 Score=23.44 Aligned_cols=49 Identities=16% Similarity=0.192 Sum_probs=32.7
Q ss_pred eeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 7 CLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
++.+..++ +.+.+.+.++++|+||.+..... ....+.++|.+.+ +. +|.
T Consensus 93 i~~~~~~i-~~~~~~~~~~~~DvVi~~~d~~~--~r~~l~~~~~~~~-ip-~i~ 141 (228)
T cd00757 93 IEAYNERL-DAENAEELIAGYDLVLDCTDNFA--TRYLINDACVKLG-KP-LVS 141 (228)
T ss_pred EEEeccee-CHHHHHHHHhCCCEEEEcCCCHH--HHHHHHHHHHHcC-CC-EEE
Confidence 33444444 35667788899999999987543 3456777888887 54 444
No 424
>cd03361 TOPRIM_TopoIA_RevGyr TopoIA_RevGyr : The topoisomerase-primase (TORPIM) domain found in members of the type IA family of DNA topoisomerases (Topo IA) similar to the ATP-dependent reverse gyrase found in archaea and thermophilic bacteria. Type IA DNA topoisomerases remove (relax) negative supercoils in the DNA by: cleaving one strand of the DNA duplex, covalently linking to the 5' phosphoryl end of the DNA break and, allowing the other strand of the duplex to pass through the gap. Reverse gyrase is also able to insert positive supercoils in the presence of ATP and negative supercoils in the presence of AMPPNP. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). For topoisomerases the conserved glutamate is believed to act as a general base in strand joining and, as a general acid in strand cleavage. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function.
Probab=30.84 E-value=99 Score=23.30 Aligned_cols=46 Identities=26% Similarity=0.195 Sum_probs=30.1
Q ss_pred HHHHHhhCCCcEEEEccCccc--hhchHHHHHHHHH-hCCccEEEcCCC
Q 025054 18 ESLVKAIKPVDVVISAVGRTE--VEDQFKLIAAIKE-VGNIKRFFPTEY 63 (258)
Q Consensus 18 ~~l~~al~g~d~Vi~~~~~~~--~~~~~~li~aa~~-~g~vk~~v~S~~ 63 (258)
..|++.++++|.||.+..++. -.....+++.+.. ..+++|+.+|+.
T Consensus 110 ~~l~~l~~~~~~iiiatD~drEGe~I~~~i~~~~~~~~~~v~R~~fs~i 158 (170)
T cd03361 110 EALRELALEVDEVLIATDPDTEGEKIAWDVYLALRPYNKNIKRAEFHEV 158 (170)
T ss_pred HHHHHHHhhCCEEEEecCCCccHHHHHHHHHHHhccCCCCeEEEEEecC
Confidence 455666779999998887754 2334566666654 233788887654
No 425
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.77 E-value=44 Score=27.63 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=22.1
Q ss_pred cccCceeEEeccCCCHHHHHHhhCCCcEEEEccCc
Q 025054 2 LYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGR 36 (258)
Q Consensus 2 l~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~ 36 (258)
|...|+++..++. ....|.+.++++|+||++++.
T Consensus 179 L~~~gatVtv~~~-~t~~L~~~~~~aDIvI~AtG~ 212 (283)
T PRK14192 179 LLNANATVTICHS-RTQNLPELVKQADIIVGAVGK 212 (283)
T ss_pred HHhCCCEEEEEeC-CchhHHHHhccCCEEEEccCC
Confidence 3455666666665 345677777788888887753
No 426
>PLN02242 methionine gamma-lyase
Probab=30.62 E-value=1.8e+02 Score=25.52 Aligned_cols=57 Identities=23% Similarity=0.272 Sum_probs=39.7
Q ss_pred CceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc----hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 5 INCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE----VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~----~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
.|+++...|..|.+.+.++++. ...|+.. .+.+ +.....|.+.|++.| +--++-..+
T Consensus 140 ~G~~~~~~d~~d~e~l~~~i~~~~tklV~le-sp~NPtG~v~dl~~I~~la~~~g-i~livDea~ 202 (418)
T PLN02242 140 CNITTTFVDITDLEAVKKAVVPGKTKVLYFE-SISNPTLTVADIPELARIAHEKG-VTVVVDNTF 202 (418)
T ss_pred cCceEEEcCCCCHHHHHHhcCcCCCEEEEEe-cCCCCCCcccCHHHHHHHHHHhC-CEEEEECCC
Confidence 6888888899999999999975 4455433 3322 445678888888888 655554444
No 427
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=30.47 E-value=1.9e+02 Score=23.18 Aligned_cols=46 Identities=15% Similarity=0.112 Sum_probs=31.3
Q ss_pred CHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEcCCCC
Q 025054 16 DHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYG 64 (258)
Q Consensus 16 d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S~~~ 64 (258)
+.+.+.+.++++|.||.+..... ....+-++|.+.+ ++.+.-+..|
T Consensus 104 ~~~~~~~~~~~~DlVvd~~D~~~--~r~~ln~~~~~~~-ip~v~~~~~g 149 (240)
T TIGR02355 104 DDAELAALIAEHDIVVDCTDNVE--VRNQLNRQCFAAK-VPLVSGAAIR 149 (240)
T ss_pred CHHHHHHHhhcCCEEEEcCCCHH--HHHHHHHHHHHcC-CCEEEEEecc
Confidence 44567788899999999886643 3455667888888 5544335443
No 428
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=30.39 E-value=72 Score=27.78 Aligned_cols=11 Identities=27% Similarity=0.320 Sum_probs=4.7
Q ss_pred EeccCCCHHHH
Q 025054 10 AQGDLHDHESL 20 (258)
Q Consensus 10 ~~~D~~d~~~l 20 (258)
+.+|+++.+++
T Consensus 108 i~~DVss~E~v 118 (398)
T PRK13656 108 INGDAFSDEIK 118 (398)
T ss_pred EEcCCCCHHHH
Confidence 34444444333
No 429
>cd02905 Macro_GDAP2_like Macro domain, GDAP2_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. This family contains proteins similar to human GDAP2, the ganglioside induced differentiation associated protein 2, whose gene is expressed at a higher level in differentiated Neuro2a cells compared with non-differentiated cells. GDAP2 contains an N-terminal macro domain and a C-terminal
Probab=29.97 E-value=1.2e+02 Score=21.96 Aligned_cols=39 Identities=21% Similarity=0.263 Sum_probs=27.2
Q ss_pred CCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEcCCCCC
Q 025054 26 PVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFPTEYGS 65 (258)
Q Consensus 26 g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~S~~~~ 65 (258)
.+..|||++++.. ...-++.++.|.+.+ ++.+.+...+.
T Consensus 68 ~~k~VIH~vgP~~~~~~~~~~~~~L~~~~~~~L~~a~~~~-~~SIAfPai~t 118 (140)
T cd02905 68 PARFIIHTVGPKYNVKYRTAAENALYSCYRNVLQLAKELG-LESIALCVISS 118 (140)
T ss_pred CccEEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHcC-CCEEEECCccc
Confidence 4689999998752 122356778888888 99888754443
No 430
>PRK07877 hypothetical protein; Provisional
Probab=29.85 E-value=2.2e+02 Score=27.13 Aligned_cols=51 Identities=16% Similarity=0.191 Sum_probs=34.5
Q ss_pred eeEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEcC
Q 025054 7 CLIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPT 61 (258)
Q Consensus 7 v~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S 61 (258)
++.+...++ .+.+.+.++++|.|+.+..... .-..+.++|.+.| +..+.-+
T Consensus 178 v~~~~~~i~-~~n~~~~l~~~DlVvD~~D~~~--~R~~ln~~a~~~~-iP~i~~~ 228 (722)
T PRK07877 178 VEVFTDGLT-EDNVDAFLDGLDVVVEECDSLD--VKVLLREAARARR-IPVLMAT 228 (722)
T ss_pred EEEEeccCC-HHHHHHHhcCCCEEEECCCCHH--HHHHHHHHHHHcC-CCEEEEc
Confidence 444555554 7788999999999999987643 3334556788888 5544334
No 431
>PF06068 TIP49: TIP49 C-terminus; InterPro: IPR010339 This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the AAA ATPase, central region IPR003959 from INTERPRO domain. In zebrafish, the liebeskummer (lik) mutation, causes development of hyperplastic embryonic hearts. lik encodes Reptin, a component of a DNA-stimulated ATPase complex. Beta-catenin and Pontin, a DNA-stimulated ATPase that is often part of complexes with Reptin, are in the same genetic pathways. The Reptin/Pontin ratio serves to regulate heart growth during development, at least in part via the beta-catenin pathway []. TBP-interacting protein 49 (TIP49) was originally identified as a TBP-binding protein, and two related proteins are encoded by individual genes, tip49a and b. Although the function of this gene family has not been elucidated, they are supposed to play a critical role in nuclear events because they interact with various kinds of nuclear factors and have DNA helicase activities. TIP49a has been suggested to act as an autoantigen in some patients with autoimmune diseases [].; GO: 0003678 DNA helicase activity, 0005524 ATP binding; PDB: 2XSZ_E 2CQA_A 2C9O_C.
Probab=29.44 E-value=91 Score=27.02 Aligned_cols=62 Identities=11% Similarity=0.203 Sum_probs=44.2
Q ss_pred eeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHH
Q 025054 136 AIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQI 198 (258)
Q Consensus 136 ~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 198 (258)
+.=..++-.|-.++.++...+-.|+.+-+.||. -.--.-++-.+++.+|.+.++..++..++
T Consensus 27 VGQ~~AReAagiiv~mIk~~K~aGr~iLiaGpp-GtGKTAlA~~ia~eLG~~~PF~~isgSEi 88 (398)
T PF06068_consen 27 VGQEKAREAAGIIVDMIKEGKIAGRAILIAGPP-GTGKTALAMAIAKELGEDVPFVSISGSEI 88 (398)
T ss_dssp ES-HHHHHHHHHHHHHHHTT--TT-EEEEEE-T-TSSHHHHHHHHHHHCTTTS-EEEEEGGGG
T ss_pred cChHHHHHHHHHHHHHHhcccccCcEEEEeCCC-CCCchHHHHHHHHHhCCCCCeeEccccee
Confidence 334567788888899999887788888888763 45556788899999999999988876554
No 432
>PF08002 DUF1697: Protein of unknown function (DUF1697); InterPro: IPR012545 This family contains many hypothetical bacterial proteins.; PDB: 2HIY_B.
Probab=29.33 E-value=1.8e+02 Score=21.07 Aligned_cols=55 Identities=16% Similarity=0.140 Sum_probs=30.0
Q ss_pred ccCHHHHHH----HHHHHhCCcceeEecCHHHHHHHHHhccCcchh--hheeeeeEEEecC
Q 025054 170 IYSFKELVA----LWEKKIGKTLEKIYVTEDQILQMIQDASNEDKI--MLVVNFSIFMKGE 224 (258)
Q Consensus 170 ~~t~~e~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~G~ 224 (258)
..+..++.. .+.+.+|.++++.-.+.+++.+.+...|++... .....+-.+..+.
T Consensus 50 ~~~~~~l~~~ie~~l~~~fG~~v~v~vrs~~el~~i~~~nPf~~~~~~~~~~~~v~fl~~~ 110 (137)
T PF08002_consen 50 DRDPAELAAKIEKALEERFGFDVPVIVRSAEELRAIIAANPFPWEAEADPKRLYVTFLSGP 110 (137)
T ss_dssp SS-HHHHHHHHHHHHHHH-TT---EEEEEHHHHHHHHTT--GGGGS----SEEEEEEE-TT
T ss_pred CCChHHHHHHHHHHHHHhcCCCeEEEEeeHHHHHHHHHHCCCcccccCCcceEEEEEeCCC
Confidence 345555554 555667989999999999999888888887543 2344444454543
No 433
>PRK09426 methylmalonyl-CoA mutase; Reviewed
Probab=29.26 E-value=87 Score=29.73 Aligned_cols=56 Identities=18% Similarity=0.119 Sum_probs=36.8
Q ss_pred cccCceeEEecc-CCCHHHHHHhhC--CCcEEEEccCc-cchhchHHHHHHHHHhCCccEE
Q 025054 2 LYMINCLIAQGD-LHDHESLVKAIK--PVDVVISAVGR-TEVEDQFKLIAAIKEVGNIKRF 58 (258)
Q Consensus 2 l~~~gv~~~~~D-~~d~~~l~~al~--g~d~Vi~~~~~-~~~~~~~~li~aa~~~g~vk~~ 58 (258)
|+..|++++.+. +.+++.+.++.. ++|+|+.|... ...+....++++.+++| .+++
T Consensus 606 l~~~GfeV~~~~~~~s~e~~v~aa~~~~a~ivvlcs~d~~~~e~~~~l~~~Lk~~G-~~~v 665 (714)
T PRK09426 606 FADLGFDVDIGPLFQTPEEAARQAVENDVHVVGVSSLAAGHKTLVPALIEALKKLG-REDI 665 (714)
T ss_pred HHhCCeeEecCCCCCCHHHHHHHHHHcCCCEEEEeccchhhHHHHHHHHHHHHhcC-CCCc
Confidence 566788887664 345666655553 77877655543 33667788888888888 6543
No 434
>COG2879 Uncharacterized small protein [Function unknown]
Probab=29.24 E-value=33 Score=21.03 Aligned_cols=20 Identities=25% Similarity=0.308 Sum_probs=16.2
Q ss_pred ccccCCCCcccCHHHHHhhh
Q 025054 238 ASELYPDVDYATVEEYLDQF 257 (258)
Q Consensus 238 ~~~~~~~~~~~s~ee~l~~~ 257 (258)
..+..||.+++|-+||.++.
T Consensus 32 mr~~hPd~p~mT~~EFfrec 51 (65)
T COG2879 32 MRKKHPDKPPMTYEEFFREC 51 (65)
T ss_pred HHHhCcCCCcccHHHHHHHH
Confidence 34567899999999999864
No 435
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=29.10 E-value=1.4e+02 Score=23.04 Aligned_cols=41 Identities=20% Similarity=0.295 Sum_probs=29.5
Q ss_pred CHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 16 DHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 16 d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
+.+.+.+.++++|.||.+.... .....+.++|++.+ +. +|.
T Consensus 101 ~~~~~~~~~~~~D~Vi~~~d~~--~~r~~l~~~~~~~~-ip-~i~ 141 (202)
T TIGR02356 101 TAENLELLINNVDLVLDCTDNF--ATRYLINDACVALG-TP-LIS 141 (202)
T ss_pred CHHHHHHHHhCCCEEEECCCCH--HHHHHHHHHHHHcC-CC-EEE
Confidence 4456778899999999987653 34556778888888 54 554
No 436
>TIGR00642 mmCoA_mut_beta methylmalonyl-CoA mutase, heterodimeric type, beta chain. The adenosylcobalamin-binding, catalytic chain of methylmalonyl-CoA mutase may form homodimers, as in mitochondrion and E. coli, or heterodimers with a shorter, homologous chain that does not bind adenosylcobalamin. This model describes this non-catalytic beta chain, as found in the enzyme from Propionibacterium freudenreichii, for which the 3-dimensional structure has been solved.
Probab=28.86 E-value=1.5e+02 Score=27.63 Aligned_cols=59 Identities=15% Similarity=0.171 Sum_probs=42.2
Q ss_pred cccCceeEEecc-CCCHHHHHHhh--CCCcEEEEccCccc-hhchHHHHHHHHHhCCccEEEcC
Q 025054 2 LYMINCLIAQGD-LHDHESLVKAI--KPVDVVISAVGRTE-VEDQFKLIAAIKEVGNIKRFFPT 61 (258)
Q Consensus 2 l~~~gv~~~~~D-~~d~~~l~~al--~g~d~Vi~~~~~~~-~~~~~~li~aa~~~g~vk~~v~S 61 (258)
|...|++++..+ +.+.+...+++ +|+++++.|..... .+....++.+.+++| .++++..
T Consensus 519 f~~gG~~~~~~~~~~~~~~~~~a~~~sga~i~viCssD~~Y~~~a~~~~~al~~ag-~~~v~lA 581 (619)
T TIGR00642 519 WHIAGIDTIQVEGGTTAEIVVEAFKKAGAQVAVLCSSDKVYAQQGLEVAKALKAAG-AKALYLA 581 (619)
T ss_pred HhcCceeeccCCCCCCHHHHHHHHHhcCCCEEEEeCCCcchHHHHHHHHHHHHhCC-CCEEEEe
Confidence 345677777554 46777777777 47888777765443 567778899999999 8877763
No 437
>PLN02358 glyceraldehyde-3-phosphate dehydrogenase
Probab=28.60 E-value=1.1e+02 Score=26.06 Aligned_cols=49 Identities=16% Similarity=0.082 Sum_probs=33.0
Q ss_pred eccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEcCCC
Q 025054 11 QGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 11 ~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
..+..|++.+.=.-.|+|+||-+++.. ..+..+..+.++| +|+++.|..
T Consensus 80 v~~~~~p~~~~w~~~gvDiVie~tG~~---~s~~~a~~hl~aG-ak~ViiSap 128 (338)
T PLN02358 80 VFGIRNPEDIPWGEAGADFVVESTGVF---TDKDKAAAHLKGG-AKKVVISAP 128 (338)
T ss_pred EEEcCCcccCcccccCCCEEEEcccch---hhHHHHHHHHHCC-CEEEEeCCC
Confidence 334555554432225899999999875 3555667777889 999987643
No 438
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=28.47 E-value=65 Score=26.60 Aligned_cols=13 Identities=8% Similarity=-0.031 Sum_probs=6.9
Q ss_pred ccCcee-EEeccCC
Q 025054 3 YMINCL-IAQGDLH 15 (258)
Q Consensus 3 ~~~gv~-~~~~D~~ 15 (258)
...|++ +...|.+
T Consensus 146 a~~G~~~V~I~~R~ 159 (289)
T PRK12548 146 ALDGAKEITIFNIK 159 (289)
T ss_pred HHCCCCEEEEEeCC
Confidence 345554 5555654
No 439
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=28.21 E-value=1.7e+02 Score=25.88 Aligned_cols=59 Identities=12% Similarity=0.064 Sum_probs=39.1
Q ss_pred ccCceeEEecc-CCCHHHHHHhhCC-CcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCC
Q 025054 3 YMINCLIAQGD-LHDHESLVKAIKP-VDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTE 62 (258)
Q Consensus 3 ~~~gv~~~~~D-~~d~~~l~~al~g-~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~ 62 (258)
...|+++...| ..|++.+.++++. ...|+....... +.-...|.+.|++.| +.-++-++
T Consensus 130 ~~~Gi~v~~vd~~~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~g-i~livD~t 193 (437)
T PRK05613 130 NRLGIEVTFVENPDDPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQ-VPLIVDNT 193 (437)
T ss_pred HhcCeEEEEECCCCCHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcC-CeEEEECC
Confidence 45688888886 5688999999975 445543222211 345678888888888 77666444
No 440
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=27.94 E-value=1.1e+02 Score=23.59 Aligned_cols=32 Identities=9% Similarity=-0.042 Sum_probs=16.5
Q ss_pred CCcEEEEccCccchhchHHHHHHHHHhCCccEEEcCC
Q 025054 26 PVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTE 62 (258)
Q Consensus 26 g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S~ 62 (258)
|.++++.-... ....+++++++.+ ++-+..|.
T Consensus 112 G~~vi~LG~~v----p~e~~v~~~~~~~-pd~v~lS~ 143 (197)
T TIGR02370 112 GFDVIDLGRDV----PIDTVVEKVKKEK-PLMLTGSA 143 (197)
T ss_pred CcEEEECCCCC----CHHHHHHHHHHcC-CCEEEEcc
Confidence 55655543332 2455666666666 55444454
No 441
>PRK07050 cystathionine beta-lyase; Provisional
Probab=27.86 E-value=2.3e+02 Score=24.59 Aligned_cols=59 Identities=17% Similarity=0.166 Sum_probs=38.8
Q ss_pred cCceeEEeccCCCHHHHHHhhCC-CcEEEEccCcc---chhchHHHHHHHHHhCCccEEEcCCC
Q 025054 4 MINCLIAQGDLHDHESLVKAIKP-VDVVISAVGRT---EVEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~---~~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
..|+++...|..+.+.+.++++. ...|+...+.. .....+.|.+.|++.| +.-++-.++
T Consensus 127 ~~Gi~v~~vd~~~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~g-i~livD~a~ 189 (394)
T PRK07050 127 DFGITVRFYDPLIGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARG-VVTAIDNTY 189 (394)
T ss_pred hcCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcC-CEEEEECCc
Confidence 46888888888777888888865 44444222211 2556678888899888 765554444
No 442
>PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B.
Probab=27.79 E-value=2e+02 Score=24.99 Aligned_cols=20 Identities=30% Similarity=0.308 Sum_probs=15.0
Q ss_pred hchHHHHHHHHHhCCccEEEc
Q 025054 40 EDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 40 ~~~~~li~aa~~~g~vk~~v~ 60 (258)
..++.++++|++.| |.+|+.
T Consensus 104 ~gQrwfL~~Ak~rG-V~~f~a 123 (384)
T PF14587_consen 104 AGQRWFLKAAKERG-VNIFEA 123 (384)
T ss_dssp HHHHHHHHHHHHTT----EEE
T ss_pred HHHHHHHHHHHHcC-CCeEEE
Confidence 57899999999999 999884
No 443
>PRK11579 putative oxidoreductase; Provisional
Probab=27.59 E-value=1e+02 Score=26.12 Aligned_cols=19 Identities=5% Similarity=0.172 Sum_probs=12.5
Q ss_pred HHHHhhC--CCcEEEEccCcc
Q 025054 19 SLVKAIK--PVDVVISAVGRT 37 (258)
Q Consensus 19 ~l~~al~--g~d~Vi~~~~~~ 37 (258)
++.+.++ ++|+|+.+++..
T Consensus 55 ~~~ell~~~~vD~V~I~tp~~ 75 (346)
T PRK11579 55 EPQHLFNDPNIDLIVIPTPND 75 (346)
T ss_pred CHHHHhcCCCCCEEEEcCCcH
Confidence 3455554 689998877653
No 444
>PF13651 EcoRI_methylase: Adenine-specific methyltransferase EcoRI
Probab=27.53 E-value=1.3e+02 Score=25.37 Aligned_cols=49 Identities=20% Similarity=0.323 Sum_probs=31.8
Q ss_pred ceeEEec--cCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 6 NCLIAQG--DLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 6 gv~~~~~--D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
++..+.| |+.+.|. .+.++.+|+|+--.+.+ ..+-.+....+.+ |.|+-
T Consensus 114 ~~~~l~GdGDFrS~E~-i~Ll~eADIVVTNPPFS---LFrEyv~~Li~~~--KkFlI 164 (336)
T PF13651_consen 114 EVTPLKGDGDFRSDEC-IELLKEADIVVTNPPFS---LFREYVAQLIEYD--KKFLI 164 (336)
T ss_pred ceeeccCCCCcCcHHH-HHHHhcCCEEEeCCCcH---HHHHHHHHHHHhC--CCEEE
Confidence 3445554 5656555 45888999998766554 4666777777777 45553
No 445
>PRK08328 hypothetical protein; Provisional
Probab=27.26 E-value=2.7e+02 Score=22.11 Aligned_cols=48 Identities=23% Similarity=0.341 Sum_probs=31.5
Q ss_pred eEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 8 LIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 8 ~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
+.....+ +.+.+.+.++++|.||.+..... ....+-++|++.+ ++ +|.
T Consensus 101 ~~~~~~~-~~~~~~~~l~~~D~Vid~~d~~~--~r~~l~~~~~~~~-ip-~i~ 148 (231)
T PRK08328 101 ETFVGRL-SEENIDEVLKGVDVIVDCLDNFE--TRYLLDDYAHKKG-IP-LVH 148 (231)
T ss_pred EEEeccC-CHHHHHHHHhcCCEEEECCCCHH--HHHHHHHHHHHcC-CC-EEE
Confidence 3334444 45567778999999999887632 3344556788888 55 554
No 446
>PF02515 CoA_transf_3: CoA-transferase family III; InterPro: IPR003673 CoA-transferases are found in organisms from all kingdoms of life. They catalyse reversible transfer reactions of coenzyme A groups from CoA-thioesters to free acids. There are at least three families of CoA-transferases, which differ in sequence and reaction mechanism: Family I consists of CoA-transferases for 3-oxoacids (2.8.3.5 from EC, 2.8.3.6 from EC), short-chain fatty acids (2.8.3.8 from EC, 2.8.3.9 from EC) and glutaconate (2.8.3.12 from EC). Most use succinyl-CoA or acetyl-CoA as CoA donors. Family II consists of the homodimeric alpha-subunits of citrate lyase and citramalate lyase (2.8.3.10 from EC, 2.8.3.11 from EC). These enzymes catalyse the transfer of acyl carrier protein (ACP) with a covalently bound CoA derivative, but can accept free CoA thioesters as well. Family III consists of formyl-CoA:oxalate CoA-transferase [], succinyl-CoA:(R)-benzylsuccinate CoA-transferase [], (E)-cinnamoyl-CoA:(R)-phenyllactate CoA-transferase [], and butyrobetainyl-CoA:(R)-carnitine CoA-transferase []. These CoA-transferases occur in prokaryotes and eukaryotes, and catalyse CoA-transfer reactions in a highly substrate- and stereo-specific manner []. This entry represents family III CoA-transferases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1PT7_B 1PT8_A 1PQY_A 1Q7E_A 1Q6Y_A 1PT5_A 1XK6_B 1XK7_C 1XVT_A 1XVU_A ....
Probab=26.72 E-value=85 Score=24.04 Aligned_cols=28 Identities=29% Similarity=0.329 Sum_probs=20.0
Q ss_pred EeccCCCHH---HHHHhhCCCcEEEEccCcc
Q 025054 10 AQGDLHDHE---SLVKAIKPVDVVISAVGRT 37 (258)
Q Consensus 10 ~~~D~~d~~---~l~~al~g~d~Vi~~~~~~ 37 (258)
|..|+.+++ .+.+.++.+|+||+...+.
T Consensus 1 V~lDl~~~~gr~~l~~L~~~ADV~i~n~rpg 31 (191)
T PF02515_consen 1 VALDLKSPEGRAALRRLLATADVVIENFRPG 31 (191)
T ss_dssp EEEETTSHHHHHHHHHHHHT-SEEEEESSTT
T ss_pred CEeeCcCHHHHHHHHHHHHhCCEEEECCchh
Confidence 356787654 6777788999999887764
No 447
>PRK15452 putative protease; Provisional
Probab=26.48 E-value=1.8e+02 Score=25.82 Aligned_cols=45 Identities=18% Similarity=0.115 Sum_probs=27.0
Q ss_pred CCCHHHHHHhhC-CCcEEEEccCccc---------hhchHHHHHHHHHhCCccEEE
Q 025054 14 LHDHESLVKAIK-PVDVVISAVGRTE---------VEDQFKLIAAIKEVGNIKRFF 59 (258)
Q Consensus 14 ~~d~~~l~~al~-g~d~Vi~~~~~~~---------~~~~~~li~aa~~~g~vk~~v 59 (258)
..+.+.++.|+. |+|+|+.-..... .+.-+..++.|++.| +|.++
T Consensus 10 ag~~e~l~aAi~~GADaVY~G~~~~~~R~~~~~f~~edl~eav~~ah~~g-~kvyv 64 (443)
T PRK15452 10 AGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLALGINEAHALG-KKFYV 64 (443)
T ss_pred CCCHHHHHHHHHCCCCEEEECCCccchhhhccCCCHHHHHHHHHHHHHcC-CEEEE
Confidence 446778888876 8999887443111 233444555566666 66555
No 448
>cd01747 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase. Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase. gamma-Glutamyl Hydrolase catalyzes the cleavage of the gamma-glutamyl chain of folylpoly-gamma-glutamyl substrates and is a central enzyme in folyl and antifolyl poly-gamma-glutamate metabolism. GATase activity involves the removal of the ammonia group from a glutamate molecule and its subsequent transfer to a specific substrate, thus creating a new carbon-nitrogen group on the substrate. gamma-Glutamyl hydrolases belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site.
Probab=26.48 E-value=1.3e+02 Score=24.75 Aligned_cols=50 Identities=10% Similarity=0.009 Sum_probs=31.5
Q ss_pred ccCceeEE--eccCCCHHHHHHhhCCCcEEEEccCccc------hhchHHHHHHHHHhC
Q 025054 3 YMINCLIA--QGDLHDHESLVKAIKPVDVVISAVGRTE------VEDQFKLIAAIKEVG 53 (258)
Q Consensus 3 ~~~gv~~~--~~D~~d~~~l~~al~g~d~Vi~~~~~~~------~~~~~~li~aa~~~g 53 (258)
++.|++++ ..|. +.+.+.+.|+.+|.|+...+..+ ....+.+++.|.+.+
T Consensus 30 ~~aG~~vvpi~~~~-~~~~l~~~l~~~dG~l~~Gg~~~~~~~~~~~~~~~l~~~a~~~~ 87 (273)
T cd01747 30 ESAGARVVPIWINE-SEEYYDKLFKSINGILFPGGAVDIDTSGYARTAKIIYNLALERN 87 (273)
T ss_pred HHCCCeEEEEEeCC-cHHHHHHHHhhCCEEEECCCCCcCCccccchHHHHHHHHHHHhh
Confidence 45566643 4443 45778888888898887666432 344567777776653
No 449
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=26.44 E-value=1.1e+02 Score=22.09 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=22.9
Q ss_pred HhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhC
Q 025054 22 KAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVG 53 (258)
Q Consensus 22 ~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g 53 (258)
++++++|+|+.+++... ....+.++.+.++.+
T Consensus 65 ~~~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~ 109 (141)
T PF00056_consen 65 EALKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYA 109 (141)
T ss_dssp GGGTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cccccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhC
Confidence 57889999999998642 344566666666665
No 450
>PRK13265 glycine/sarcosine/betaine reductase complex protein A; Reviewed
Probab=26.25 E-value=2.2e+02 Score=20.73 Aligned_cols=50 Identities=20% Similarity=0.318 Sum_probs=34.7
Q ss_pred EEeccCCC--HHHHHHhhC--CCcEEEEccCc--------cchhchHHHHHHHHHhCCccEEE
Q 025054 9 IAQGDLHD--HESLVKAIK--PVDVVISAVGR--------TEVEDQFKLIAAIKEVGNIKRFF 59 (258)
Q Consensus 9 ~~~~D~~d--~~~l~~al~--g~d~Vi~~~~~--------~~~~~~~~li~aa~~~g~vk~~v 59 (258)
++.||.+- -..+.+.++ |+++||+.+-. .+++-++++-+.+.+.| ...+|
T Consensus 10 iiiGdRDGiPgpAie~c~k~~gaevvfs~TECfVctaAGAMDLEnQ~Rvk~~aEk~g-~eNvv 71 (154)
T PRK13265 10 IIIGDRDGIPGPAIEECVKTTGAEVVFSSTECFVUTAAGAMDLENQKRVKDLAEKFG-AENVV 71 (154)
T ss_pred EEEecCCCCCcHHHHHHHhccCceEEEEeeeEEEeecccccchHHHHHHHHHHHhcC-CccEE
Confidence 45677763 235666665 78888765432 23888999999999998 66555
No 451
>COG3963 Phospholipid N-methyltransferase [Lipid metabolism]
Probab=26.19 E-value=1.2e+02 Score=23.18 Aligned_cols=47 Identities=19% Similarity=0.230 Sum_probs=30.1
Q ss_pred CceeEEeccCCCHHHHHHhhCC--CcEEEEccCccc--hhchHHHHHHHHH
Q 025054 5 INCLIAQGDLHDHESLVKAIKP--VDVVISAVGRTE--VEDQFKLIAAIKE 51 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g--~d~Vi~~~~~~~--~~~~~~li~aa~~ 51 (258)
++++++.||..|.+.-....+| .|.||++.+.-+ ......+++.+..
T Consensus 94 p~~~ii~gda~~l~~~l~e~~gq~~D~viS~lPll~~P~~~~iaile~~~~ 144 (194)
T COG3963 94 PGVNIINGDAFDLRTTLGEHKGQFFDSVISGLPLLNFPMHRRIAILESLLY 144 (194)
T ss_pred CCccccccchhhHHHHHhhcCCCeeeeEEeccccccCcHHHHHHHHHHHHH
Confidence 5778888887776643334443 689999887654 4445566665544
No 452
>PRK00055 ribonuclease Z; Reviewed
Probab=25.85 E-value=2.4e+02 Score=22.45 Aligned_cols=52 Identities=25% Similarity=0.292 Sum_probs=34.0
Q ss_pred EEeccCCCHHHHHHhhCCCcEEEEccCccc--h--------hchHHHHHHHHHhCCccEEEcC
Q 025054 9 IAQGDLHDHESLVKAIKPVDVVISAVGRTE--V--------EDQFKLIAAIKEVGNIKRFFPT 61 (258)
Q Consensus 9 ~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~--~--------~~~~~li~aa~~~g~vk~~v~S 61 (258)
++.+|-.-.+.+.+.++++|.+|+-+.... . -.....++.+++.+ +|+++.+
T Consensus 170 ~y~~Dt~~~~~~~~~~~~~d~li~E~~~~~~~~~~~~~~~H~~~~~a~~~~~~~~-~~~~vl~ 231 (270)
T PRK00055 170 AYCGDTRPCEALVELAKGADLLVHEATFGDEDEELAKEYGHSTARQAAEIAKEAG-VKRLILT 231 (270)
T ss_pred EEeCCCCCcHHHHHHhCCCCEEEEeccCCcchhhHHhhcCCCCHHHHHHHHHHcC-CCEEEEE
Confidence 346676555677788889999888654322 0 01234666777788 8998863
No 453
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=25.79 E-value=2.8e+02 Score=21.33 Aligned_cols=54 Identities=17% Similarity=0.183 Sum_probs=33.8
Q ss_pred eEEeccCCC-HHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEcCCCC
Q 025054 8 LIAQGDLHD-HESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYG 64 (258)
Q Consensus 8 ~~~~~D~~d-~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S~~~ 64 (258)
+.+..++.+ .+...+.++++|+||.+... ......+-++|++.+ ++.+..+..|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~dvVi~~~d~--~~~~~~ln~~c~~~~-ip~i~~~~~G 148 (198)
T cd01485 94 SIVEEDSLSNDSNIEEYLQKFTLVIATEEN--YERTAKVNDVCRKHH-IPFISCATYG 148 (198)
T ss_pred EEEecccccchhhHHHHHhCCCEEEECCCC--HHHHHHHHHHHHHcC-CCEEEEEeec
Confidence 333344432 34556678899999988654 335556778899988 6554444443
No 454
>PRK05434 phosphoglyceromutase; Provisional
Probab=25.74 E-value=2.6e+02 Score=25.37 Aligned_cols=49 Identities=22% Similarity=0.483 Sum_probs=34.2
Q ss_pred eccCCCHHHHHHhhCCC---cEEEEccCccc-------hhchHHHHHHHHHhCCccE-EEc
Q 025054 11 QGDLHDHESLVKAIKPV---DVVISAVGRTE-------VEDQFKLIAAIKEVGNIKR-FFP 60 (258)
Q Consensus 11 ~~D~~d~~~l~~al~g~---d~Vi~~~~~~~-------~~~~~~li~aa~~~g~vk~-~v~ 60 (258)
.+++.+-+.|.++++.+ ...+|+.+.-. ......+++.|++.| |++ +|+
T Consensus 89 ~g~~~~n~~~~~~~~~~~~~~~~lHl~GL~SdggVHsh~~hl~~l~~~a~~~g-~~~v~vH 148 (507)
T PRK05434 89 DGSFFENPALLDAIDKAKKNGGALHLMGLLSDGGVHSHIDHLFALLELAKEEG-VKKVYVH 148 (507)
T ss_pred cCCcccCHHHHHHHHHHHhcCCeEEEEEeccCCCcccHHHHHHHHHHHHHHcC-CCEEEEE
Confidence 45666666777777643 56777776422 677789999999999 955 455
No 455
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=25.68 E-value=70 Score=27.73 Aligned_cols=45 Identities=18% Similarity=0.246 Sum_probs=28.5
Q ss_pred ccCCCHHHHHHh-hCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc-CC
Q 025054 12 GDLHDHESLVKA-IKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP-TE 62 (258)
Q Consensus 12 ~D~~d~~~l~~a-l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~-S~ 62 (258)
+|..+.+++..+ ++++|+||.+.+.. ...+++.++ +.| .++|- |+
T Consensus 89 ~~~~~~~~~~~~~~~~~DvVf~Alp~~---~s~~i~~~~-~~g--~~VIDlSs 135 (381)
T PLN02968 89 QDLPNLVAVKDADFSDVDAVFCCLPHG---TTQEIIKAL-PKD--LKIVDLSA 135 (381)
T ss_pred ccccceecCCHHHhcCCCEEEEcCCHH---HHHHHHHHH-hCC--CEEEEcCc
Confidence 444433334433 68999999988763 567777776 456 45665 54
No 456
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=25.17 E-value=2.3e+02 Score=24.43 Aligned_cols=58 Identities=17% Similarity=0.170 Sum_probs=37.0
Q ss_pred cCceeEEeccCCCHHHHHHhhCC-CcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCC
Q 025054 4 MINCLIAQGDLHDHESLVKAIKP-VDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTE 62 (258)
Q Consensus 4 ~~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~ 62 (258)
..|+++...|..+.+.+.++++. ...|+....... +.....|.+.|++.| +.-++-..
T Consensus 112 ~~gi~v~~~d~~~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g-~~livD~t 173 (377)
T TIGR01324 112 RMGVDITYYDPLIGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPG-IVIMIDNT 173 (377)
T ss_pred hcCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcC-CEEEEECC
Confidence 45777777777666788888864 455543222211 445567888899888 77666443
No 457
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=25.16 E-value=2.1e+02 Score=24.46 Aligned_cols=31 Identities=23% Similarity=0.290 Sum_probs=21.9
Q ss_pred CceeEEeccCCCHHHHHHhhC-CCcEEEEccC
Q 025054 5 INCLIAQGDLHDHESLVKAIK-PVDVVISAVG 35 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~-g~d~Vi~~~~ 35 (258)
++..++.|++.+++....++. |+|+|.-..+
T Consensus 149 p~~~viaGNV~T~e~a~~Li~aGAD~ikVgiG 180 (343)
T TIGR01305 149 PEHTIMAGNVVTGEMVEELILSGADIVKVGIG 180 (343)
T ss_pred CCCeEEEecccCHHHHHHHHHcCCCEEEEccc
Confidence 457788888888777666654 8888865443
No 458
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=25.13 E-value=1.1e+02 Score=25.48 Aligned_cols=18 Identities=22% Similarity=0.266 Sum_probs=11.5
Q ss_pred HHHhhC--CCcEEEEccCcc
Q 025054 20 LVKAIK--PVDVVISAVGRT 37 (258)
Q Consensus 20 l~~al~--g~d~Vi~~~~~~ 37 (258)
+.+.++ ++|+|+.+++..
T Consensus 59 ~~~ll~~~~iD~V~Iatp~~ 78 (342)
T COG0673 59 LEELLADPDIDAVYIATPNA 78 (342)
T ss_pred HHHHhcCCCCCEEEEcCCCh
Confidence 445555 378887777654
No 459
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=24.99 E-value=1.1e+02 Score=21.28 Aligned_cols=33 Identities=24% Similarity=0.352 Sum_probs=24.0
Q ss_pred hhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 23 AIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 23 al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
.++++|+||.+.+.. ..+.++.++.+.| + ++|-
T Consensus 63 ~~~~~Dvvf~a~~~~---~~~~~~~~~~~~g-~-~ViD 95 (121)
T PF01118_consen 63 ELSDVDVVFLALPHG---ASKELAPKLLKAG-I-KVID 95 (121)
T ss_dssp HHTTESEEEE-SCHH---HHHHHHHHHHHTT-S-EEEE
T ss_pred HhhcCCEEEecCchh---HHHHHHHHHhhCC-c-EEEe
Confidence 458999999998764 4667777888888 6 5554
No 460
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=24.89 E-value=2.7e+02 Score=23.70 Aligned_cols=100 Identities=15% Similarity=0.154 Sum_probs=44.7
Q ss_pred ccCceeEEeccCCCHHHHHHhhC--CCcEE-EEccC------ccchhchHHHHHHHHHhCCccEEE---cCCCCCCCCCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIK--PVDVV-ISAVG------RTEVEDQFKLIAAIKEVGNIKRFF---PTEYGSNVDAG 70 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~--g~d~V-i~~~~------~~~~~~~~~li~aa~~~g~vk~~v---~S~~~~~~~~~ 70 (258)
++.|+.+...|=. ..++.+.|+ |++.| +-+.. ..+.+....+++.|+++| .+.++ +|.+-+++...
T Consensus 13 E~~G~~f~~~~G~-~~d~~~ilk~~G~N~vRlRvwv~P~~~g~~~~~~~~~~akrak~~G-m~vlldfHYSD~WaDPg~Q 90 (332)
T PF07745_consen 13 EAAGVKFYDENGQ-EKDLFQILKDHGVNAVRLRVWVNPYDGGYNDLEDVIALAKRAKAAG-MKVLLDFHYSDFWADPGKQ 90 (332)
T ss_dssp HHTT---B-TTSS-B--HHHHHHHTT--EEEEEE-SS-TTTTTTSHHHHHHHHHHHHHTT--EEEEEE-SSSS--BTTB-
T ss_pred HHcCCeEECCCCC-CCCHHHHHHhcCCCeEEEEeccCCcccccCCHHHHHHHHHHHHHCC-CeEEEeecccCCCCCCCCC
Confidence 3456555433322 233444444 77766 22221 122677788899999999 88877 38877766542
Q ss_pred CC-C-CCCccchhhHHHHHH-------HHHhCCCCeEEEecCc
Q 025054 71 HP-I-EPAKSGYARKAKIRR-------AIEAEGIPHTYVSCNC 104 (258)
Q Consensus 71 ~~-~-~~~~~~~~~k~~~e~-------~l~~~~~~~t~lr~~~ 104 (258)
.. . .....+-..+..+.+ .|++.|+....|..|.
T Consensus 91 ~~P~aW~~~~~~~l~~~v~~yT~~vl~~l~~~G~~pd~VQVGN 133 (332)
T PF07745_consen 91 NKPAAWANLSFDQLAKAVYDYTKDVLQALKAAGVTPDMVQVGN 133 (332)
T ss_dssp B--TTCTSSSHHHHHHHHHHHHHHHHHHHHHTT--ESEEEESS
T ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCccEEEeCc
Confidence 11 1 111122223333333 3345788777777653
No 461
>cd00475 CIS_IPPS Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS); homodimers which catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase) catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidooglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS are mechanistically and structurally distinct from trans-IPPS, lacking the DDXXD motifs, yet requiring Mg2+ for activity.
Probab=24.82 E-value=1.6e+02 Score=23.41 Aligned_cols=78 Identities=17% Similarity=0.124 Sum_probs=43.8
Q ss_pred ceEeccCCCceeeeeccchHHHHHHHHhcCCC-CCCceEEEcCCCCccCHHHHHHHHHHHhC----CcceeEecCHHHHH
Q 025054 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPR-TLNKTLYLRPPKNIYSFKELVALWEKKIG----KTLEKIYVTEDQIL 199 (258)
Q Consensus 125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~l~g~~~~~t~~e~~~~~~~~~g----~~~~~~~~~~~~~~ 199 (258)
++.+.|+-+ . -.+++.+.+..+-+..+ ..+-.++++- ..-+-.|+++++.+... .......++.+.+.
T Consensus 89 ~vr~iGd~~----~-Lp~~~~~~~~~~e~~T~~~~~~~lni~~--~Y~gr~eI~~a~~~~~~~~~~~~~~~~~i~~~~~~ 161 (221)
T cd00475 89 RIRIIGDLS----L-LPESLQKEIKKAEEATKNNTGFTLNVAF--NYGGRQEIIHAVREIAEKVKAGKLTPEDIDESTLN 161 (221)
T ss_pred EEEEEeChh----h-CCHHHHHHHHHHHHHhccCCCcEEEEEe--cCCCHHHHHHHHHHHHHHHHcCCCChHhCCHHHHH
Confidence 455666532 1 23466666655544332 2445788873 36667788888777652 23444567777676
Q ss_pred HHHHhccCcc
Q 025054 200 QMIQDASNED 209 (258)
Q Consensus 200 ~~~~~~~~~~ 209 (258)
+.+...++|+
T Consensus 162 ~~L~~~~~p~ 171 (221)
T cd00475 162 KHLYTHDSPD 171 (221)
T ss_pred HhhCcCCCCC
Confidence 6665444443
No 462
>PF02629 CoA_binding: CoA binding domain; InterPro: IPR003781 This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases.; GO: 0005488 binding; PDB: 3IL2_B 3IKT_A 3IKV_B 2SCU_D 1JKJ_D 2NU7_A 1CQI_A 1JLL_A 2NU8_D 1SCU_D ....
Probab=24.71 E-value=1.8e+02 Score=19.28 Aligned_cols=40 Identities=23% Similarity=0.319 Sum_probs=27.9
Q ss_pred CHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 16 DHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 16 d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
+.+.+.+.+ ++|+.+.+++.. ..+..++.+.++| +|-++-
T Consensus 53 ~~~~l~~~~-~i~iaii~VP~~---~a~~~~~~~~~~g-Ik~i~n 92 (96)
T PF02629_consen 53 SMDELEEFI-EIDIAIITVPAE---AAQEVADELVEAG-IKGIVN 92 (96)
T ss_dssp SHHHHHHHC-TTSEEEEES-HH---HHHHHHHHHHHTT--SEEEE
T ss_pred cHHHhhhhh-CCCEEEEEcCHH---HHHHHHHHHHHcC-CCEEEE
Confidence 556667766 599988888654 4667777778899 998774
No 463
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=24.60 E-value=1.9e+02 Score=25.15 Aligned_cols=48 Identities=10% Similarity=0.131 Sum_probs=31.5
Q ss_pred eEEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 8 LIAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 8 ~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
+.+...++ .+.+.+.++++|+|+.+.... .....+-++|.+.+ +. ||+
T Consensus 115 ~~~~~~i~-~~~~~~~~~~~D~Vvd~~d~~--~~r~~ln~~~~~~~-~p-~v~ 162 (392)
T PRK07878 115 RLHEFRLD-PSNAVELFSQYDLILDGTDNF--ATRYLVNDAAVLAG-KP-YVW 162 (392)
T ss_pred EEEeccCC-hhHHHHHHhcCCEEEECCCCH--HHHHHHHHHHHHcC-CC-EEE
Confidence 33444553 445677889999999987643 33445667888888 55 554
No 464
>PRK14834 undecaprenyl pyrophosphate synthase; Provisional
Probab=24.58 E-value=2.4e+02 Score=22.82 Aligned_cols=67 Identities=19% Similarity=0.148 Sum_probs=39.5
Q ss_pred cchHHHHHHHHhcCCC-CCCceEEEcCCCCccCHHHHHHHHHHHh----CCcceeEecCHHHHHHHHHhccCcc
Q 025054 141 EEDIATYTIKAVDDPR-TLNKTLYLRPPKNIYSFKELVALWEKKI----GKTLEKIYVTEDQILQMIQDASNED 209 (258)
Q Consensus 141 ~~D~a~~~~~~l~~~~-~~~~~~~l~g~~~~~t~~e~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~ 209 (258)
.+|+.+.+..+.+..+ ..+-.++++- ..-+-.|+++.+.+.. ........++.+.+.+.+....+|+
T Consensus 114 p~~l~~~i~~~e~~T~~~~~~~lnla~--~Yggr~EI~~A~k~~~~~~~~g~~~~~dI~e~~i~~~L~~~~~pd 185 (249)
T PRK14834 114 EADICALLNEAEELTRNNTGLNLVIAF--NYGSRDEIARAVRRLAREVAEGRLDPASIDAETISANLDTADIPD 185 (249)
T ss_pred CHHHHHHHHHHHHhhccCCceEEEEEe--ccCCHHHHHHHHHHHHHHHHcCCCChhhCCHHHHHHHhccCCCCC
Confidence 4566666666554432 2445677773 3666778888777764 2234455677777766665544443
No 465
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=24.46 E-value=1.2e+02 Score=25.73 Aligned_cols=33 Identities=21% Similarity=0.281 Sum_probs=25.3
Q ss_pred hhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 23 AIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 23 al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
.++++|+||.+++.. ....++.++.++| +++|-
T Consensus 65 ~~~~vD~Vf~alP~~---~~~~~v~~a~~aG--~~VID 97 (343)
T PRK00436 65 ILAGADVVFLALPHG---VSMDLAPQLLEAG--VKVID 97 (343)
T ss_pred HhcCCCEEEECCCcH---HHHHHHHHHHhCC--CEEEE
Confidence 457899999988764 5677888888888 57775
No 466
>PF13727 CoA_binding_3: CoA-binding domain; PDB: 3NKL_B.
Probab=24.38 E-value=1.2e+02 Score=22.15 Aligned_cols=31 Identities=26% Similarity=0.400 Sum_probs=19.1
Q ss_pred CCcEEEEccCccchhchHHHHHHHHHhCCccE
Q 025054 26 PVDVVISAVGRTEVEDQFKLIAAIKEVGNIKR 57 (258)
Q Consensus 26 g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~ 57 (258)
++|.|+.+.+....+..+.+++.|.+.+ |+-
T Consensus 141 ~id~v~ial~~~~~~~i~~ii~~~~~~~-v~v 171 (175)
T PF13727_consen 141 DIDEVIIALPWSEEEQIKRIIEELENHG-VRV 171 (175)
T ss_dssp T--EEEE--TTS-HHHHHHHHHHHHTTT--EE
T ss_pred CCCEEEEEcCccCHHHHHHHHHHHHhCC-CEE
Confidence 6888877776665667788888888888 764
No 467
>KOG1321 consensus Protoheme ferro-lyase (ferrochelatase) [Coenzyme transport and metabolism]
Probab=24.25 E-value=1.9e+02 Score=24.37 Aligned_cols=53 Identities=13% Similarity=0.205 Sum_probs=35.3
Q ss_pred hchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh----CCCCeEEEe
Q 025054 40 EDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA----EGIPHTYVS 101 (258)
Q Consensus 40 ~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~----~~~~~t~lr 101 (258)
..+...++..++.| ++|.|. |.|.-.. ...-..+-..+++++++ .+++|++|-
T Consensus 140 PlTEea~~qikkd~-v~r~VafsqYPQyS--------~sTsGSSln~l~r~~r~~~~~~~~~wsiId 197 (395)
T KOG1321|consen 140 PLTEEALEQIKKDG-VTRAVAFSQYPQYS--------CSTSGSSLNELWRQFREDGYERDIKWSIID 197 (395)
T ss_pred cccHHHHHHHHhcC-ceeEEeeccCCcee--------eecCcccHHHHHHHHHhcCcccCCceEeec
Confidence 35677888889999 999886 7764321 11123345667777776 468999883
No 468
>COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription]
Probab=24.22 E-value=1.5e+02 Score=25.70 Aligned_cols=71 Identities=14% Similarity=0.231 Sum_probs=51.6
Q ss_pred ceEeccCCCceeeeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHH
Q 025054 125 NILFYGDGQPKAIFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQI 198 (258)
Q Consensus 125 ~~~~~g~g~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~ 198 (258)
.....++| -+.=+-.+..|-.++.++.+.+-.|+.+-+.||- -.--.-+|-.+++-+|.+.++..++-.++
T Consensus 33 ~~k~~~dG--~VGQ~~AReAaGvIv~mik~gk~aGrgiLi~Gpp-gTGKTAlA~gIa~eLG~dvPF~~isgsEi 103 (450)
T COG1224 33 KAKFIGDG--LVGQEEAREAAGVIVKMIKQGKMAGRGILIVGPP-GTGKTALAMGIARELGEDVPFVAISGSEI 103 (450)
T ss_pred CEeEcCCc--ccchHHHHHhhhHHHHHHHhCcccccEEEEECCC-CCcHHHHHHHHHHHhCCCCCceeecccee
Confidence 44555543 3444567888889999999887678888787752 44455677789999999999888876544
No 469
>PF03786 UxuA: D-mannonate dehydratase (UxuA); InterPro: IPR004628 This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.; GO: 0008927 mannonate dehydratase activity, 0006064 glucuronate catabolic process; PDB: 1TZ9_A 3FVM_A 3BDK_B 3BAN_B 3DBN_B.
Probab=24.22 E-value=3.1e+02 Score=23.55 Aligned_cols=159 Identities=16% Similarity=0.185 Sum_probs=61.0
Q ss_pred CCHHHHHHhhC--CCcEEEEccCccc------hhchHHHHHHHHHhCCccEEEc-CCCCCCCCCCCCCCCCccchhhHHH
Q 025054 15 HDHESLVKAIK--PVDVVISAVGRTE------VEDQFKLIAAIKEVGNIKRFFP-TEYGSNVDAGHPIEPAKSGYARKAK 85 (258)
Q Consensus 15 ~d~~~l~~al~--g~d~Vi~~~~~~~------~~~~~~li~aa~~~g~vk~~v~-S~~~~~~~~~~~~~~~~~~~~~k~~ 85 (258)
+|+.+|....+ |++.|+....... .+.-+.+-+.++++| .+.-+- |.- ... .. . ..--.....
T Consensus 12 ~dpv~l~~irQ~~Gv~giV~al~~~p~g~~W~~e~i~~~k~~ie~~G-L~~~vIEsvp-v~e-~I---k--lG~~~RD~~ 83 (351)
T PF03786_consen 12 DDPVTLWDIRQQPGVTGIVTALHDIPNGEVWDYEEIRALKERIEAAG-LTLSVIESVP-VHE-DI---K--LGLPGRDEE 83 (351)
T ss_dssp T-SS-HHHHCTSTTEEEEEE--SSS-TTS---HHHHHHHHHHHHCTT--EEEEEES-----H-HH---H--CT-TTHHHH
T ss_pred CCcchHHHHHHhcCCCCeeeCCCCCCCCCCCCHHHHHHHHHHHHHcC-CeEEEEecCC-hHH-HH---h--cCCCcHHHH
Confidence 46667777766 8877766654321 455566667777789 877665 431 110 00 0 000012234
Q ss_pred HHHHHH------hCCCCeEEEecCcccccCcCCCCCCCCCCCCCCceEecc-CCCceeeeeccchHHHHHHHHhcCCCCC
Q 025054 86 IRRAIE------AEGIPHTYVSCNCSFGFFLPTMAQPGATAPPRENILFYG-DGQPKAIFNKEEDIATYTIKAVDDPRTL 158 (258)
Q Consensus 86 ~e~~l~------~~~~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~g~~~~~~v~~~D~a~~~~~~l~~~~~~ 158 (258)
+|.+.+ +.|+++++-. |.+.+ .+ .+..+...+ +|.....| +..|++.+=..++..+. .
T Consensus 84 Ieny~~~Irnlg~~GI~vvcYN-------FMPv~---dW---tRT~l~~~~rgGa~~l~F-d~~~~~~~d~~il~~~~-a 148 (351)
T PF03786_consen 84 IENYKQTIRNLGKAGIKVVCYN-------FMPVF---DW---TRTDLAYPLRGGATALRF-DHDDFAAFDPHILKRPG-A 148 (351)
T ss_dssp HHHHHHHHHHHHHTT--EEEEE---------SS----S------SEEEEE-TTS-EEEEE-ECCCCCTS-HHHHHHT---
T ss_pred HHHHHHHHHHHHhcCCCEEEEE-------eeeee---ee---eeccccccCCCCcEEEEE-cHHHHhccCHHhhhccc-c
Confidence 444432 3688866544 22221 11 111233332 23333222 33333332222443332 3
Q ss_pred CceEEEcCCCCccCHHHHHHHHHHHhCCcceeEecCHHHHHHHHHh
Q 025054 159 NKTLYLRPPKNIYSFKELVALWEKKIGKTLEKIYVTEDQILQMIQD 204 (258)
Q Consensus 159 ~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 204 (258)
...|.+.|-+... ..++-+.+.. +..++.+++.+.+..
T Consensus 149 ~~~~~lPg~~~~~-~~~~~~~l~~-------y~~i~~e~lw~nl~y 186 (351)
T PF03786_consen 149 EADYTLPGWEEEY-LEEFRELLAA-------YGGIDEEQLWENLKY 186 (351)
T ss_dssp ----------CCC-HHHHHHHHHH-------CCT--HHHHHHHHHH
T ss_pred ccCCCCCCCChHH-HHHHHHHHHH-------hcCCCHHHHHHHHHH
Confidence 4456677644334 6666666643 446777888777654
No 470
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=24.21 E-value=2.8e+02 Score=21.70 Aligned_cols=50 Identities=18% Similarity=0.298 Sum_probs=31.6
Q ss_pred EEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHh-CCccEEEcCC
Q 025054 9 IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEV-GNIKRFFPTE 62 (258)
Q Consensus 9 ~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~-g~vk~~v~S~ 62 (258)
.+...++ .+.+.+.++++|+||.+.... .....+.+.|.+. + ++-+.-+.
T Consensus 101 ~~~~~i~-~~~~~~~~~~~DvVI~a~D~~--~~r~~l~~~~~~~~~-~p~I~~~~ 151 (212)
T PRK08644 101 AHNEKID-EDNIEELFKDCDIVVEAFDNA--ETKAMLVETVLEHPG-KKLVAASG 151 (212)
T ss_pred EEeeecC-HHHHHHHHcCCCEEEECCCCH--HHHHHHHHHHHHhCC-CCEEEeeh
Confidence 3344443 356677889999999986543 3445677888887 7 55443343
No 471
>cd02907 Macro_Af1521_BAL_like Macro domain, Af1521- and BAL-like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. The macro domains in this family show similarity to Af1521, a protein from Archaeoglobus fulgidus containing a stand-alone macro domain. Af1521 binds ADP-ribose and exhibits phosphatase activity toward Appr-1"-p. Also included in this family are the N-terminal (or first) macro domains
Probab=24.19 E-value=3.1e+02 Score=20.53 Aligned_cols=41 Identities=22% Similarity=0.329 Sum_probs=28.0
Q ss_pred CCcEEEEccCccc------------hhchHHHHHHHHHhCCccEEEcCCCCCCC
Q 025054 26 PVDVVISAVGRTE------------VEDQFKLIAAIKEVGNIKRFFPTEYGSNV 67 (258)
Q Consensus 26 g~d~Vi~~~~~~~------------~~~~~~li~aa~~~g~vk~~v~S~~~~~~ 67 (258)
++..|||++++.. ...-++.++.|.+.+ ++.+.+..+|...
T Consensus 73 ~~k~IiH~v~P~~~~~~~~~~~~~L~~~~~~~L~~a~~~~-~~SIA~P~lgtG~ 125 (175)
T cd02907 73 PCKYVIHAVGPRWSGGEAEECVEKLKKAILNSLRKAEELG-LRSIAIPAISSGI 125 (175)
T ss_pred CCCEEEEeCCCcCCCCCCchHHHHHHHHHHHHHHHHHHcC-CCEEEECCcccCC
Confidence 3679999987642 233456777777778 8988876665543
No 472
>KOG1099 consensus SAM-dependent methyltransferase/cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=24.19 E-value=1.9e+02 Score=23.35 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=25.4
Q ss_pred CceeEEeccCCCHHHHHHhhC-----CCcEEEEccCcc
Q 025054 5 INCLIAQGDLHDHESLVKAIK-----PVDVVISAVGRT 37 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~-----g~d~Vi~~~~~~ 37 (258)
.||.-+++|++.+..+...++ .+|.|++-.+++
T Consensus 89 ~GV~qlq~DIT~~stae~Ii~hfggekAdlVvcDGAPD 126 (294)
T KOG1099|consen 89 EGVIQLQGDITSASTAEAIIEHFGGEKADLVVCDGAPD 126 (294)
T ss_pred CceEEeecccCCHhHHHHHHHHhCCCCccEEEeCCCCC
Confidence 588899999998877776654 479898766653
No 473
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=24.14 E-value=3e+02 Score=20.67 Aligned_cols=47 Identities=15% Similarity=0.145 Sum_probs=30.2
Q ss_pred EEeccCCCHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHh-CCccEEE
Q 025054 9 IAQGDLHDHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEV-GNIKRFF 59 (258)
Q Consensus 9 ~~~~D~~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~-g~vk~~v 59 (258)
.+...+ +.+.+.+.++++|.||.+.... ..-..+.+.+.+. + +.-+.
T Consensus 72 ~~~~~~-~~~~~~~~l~~~DlVi~~~d~~--~~r~~i~~~~~~~~~-ip~i~ 119 (174)
T cd01487 72 AINIKI-DENNLEGLFGDCDIVVEAFDNA--ETKAMLAESLLGNKN-KPVVC 119 (174)
T ss_pred EEEeec-ChhhHHHHhcCCCEEEECCCCH--HHHHHHHHHHHHHCC-CCEEE
Confidence 334444 3456778899999999985543 3335577777776 6 55443
No 474
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=23.82 E-value=1.1e+02 Score=26.82 Aligned_cols=29 Identities=21% Similarity=0.258 Sum_probs=19.3
Q ss_pred CCCcEEEEccCccchhchHHHHHHHHHhCCccE
Q 025054 25 KPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKR 57 (258)
Q Consensus 25 ~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~ 57 (258)
.++|.||..++.. ....++.+|++.| +.-
T Consensus 67 ~~~d~vv~~~g~~---~~~~~~~~a~~~~-i~~ 95 (450)
T PRK14106 67 EGVDLVVVSPGVP---LDSPPVVQAHKKG-IEV 95 (450)
T ss_pred hcCCEEEECCCCC---CCCHHHHHHHHCC-CcE
Confidence 4689999887753 2344777777776 543
No 475
>COG0293 FtsJ 23S rRNA methylase [Translation, ribosomal structure and biogenesis]
Probab=23.66 E-value=90 Score=24.45 Aligned_cols=32 Identities=38% Similarity=0.571 Sum_probs=23.6
Q ss_pred CceeEEeccCCCHHHHHH---hhCC--CcEEEEccCc
Q 025054 5 INCLIAQGDLHDHESLVK---AIKP--VDVVISAVGR 36 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~---al~g--~d~Vi~~~~~ 36 (258)
.||..+++|+++++.+.+ .+.+ +|.|++=.++
T Consensus 85 ~~V~~iq~d~~~~~~~~~l~~~l~~~~~DvV~sD~ap 121 (205)
T COG0293 85 PGVIFLQGDITDEDTLEKLLEALGGAPVDVVLSDMAP 121 (205)
T ss_pred CCceEEeeeccCccHHHHHHHHcCCCCcceEEecCCC
Confidence 679999999998765554 4444 5999876655
No 476
>PRK08955 glyceraldehyde-3-phosphate dehydrogenase; Validated
Probab=23.57 E-value=1.2e+02 Score=25.73 Aligned_cols=37 Identities=32% Similarity=0.309 Sum_probs=28.5
Q ss_pred hCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEcCCCC
Q 025054 24 IKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYG 64 (258)
Q Consensus 24 l~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S~~~ 64 (258)
++|+|+||-+++.. ..+..+.++.++| +++++.|+..
T Consensus 86 w~gvDiVle~tG~~---~s~~~a~~hl~aG-ak~V~iSap~ 122 (334)
T PRK08955 86 WSGCDVVIEASGVM---KTKALLQAYLDQG-VKRVVVTAPV 122 (334)
T ss_pred ccCCCEEEEccchh---hcHHHHHHHHHCC-CEEEEECCCC
Confidence 34999999988865 3566677777899 9999987653
No 477
>TIGR01057 topA_arch DNA topoisomerase I, archaeal. This model describes topoisomerase I from archaea. These enzymes are involved in the control of DNA topology. DNA topoisomerase I belongs to the type I topoisomerases, which are ATP-independent.
Probab=23.56 E-value=1.4e+02 Score=27.85 Aligned_cols=46 Identities=24% Similarity=0.123 Sum_probs=33.2
Q ss_pred HHHHHhhCCCcEEEEccCccc--hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 18 ESLVKAIKPVDVVISAVGRTE--VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 18 ~~l~~al~g~d~Vi~~~~~~~--~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
..|.+.++++|.||++..++. -.....+++.+...+.|+|+-+|++
T Consensus 85 ~~ik~l~~~~d~ii~AtD~DREGE~I~~~i~~~~~~~~~v~Rl~~~~l 132 (618)
T TIGR01057 85 KALSKLAKGADEYINACDYDIEGEVIGFKALKYFCGVERAKRMKFSTL 132 (618)
T ss_pred HHHHHHHhcCCEEEECCCCCccHHHHHHHHHHHhccCCCceEEEEccC
Confidence 456677789999999998765 2334567888854334999998765
No 478
>TIGR03853 matur_matur probable metal-binding protein. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulfatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulfur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulfatase/maturase systems.
Probab=23.52 E-value=2.2e+02 Score=18.44 Aligned_cols=38 Identities=26% Similarity=0.337 Sum_probs=27.8
Q ss_pred CCccCHHHHHHHHHHHhCCcceeEe-----cCHHHHHHHHHhc
Q 025054 168 KNIYSFKELVALWEKKIGKTLEKIY-----VTEDQILQMIQDA 205 (258)
Q Consensus 168 ~~~~t~~e~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~ 205 (258)
+.++|-.++.+.+.+.+|...++.. ++.+++++-+...
T Consensus 15 ~~~~t~~~L~~~i~~~FG~~arFhTCSa~~m~a~~Li~FL~~k 57 (77)
T TIGR03853 15 GEPYTRESLKAAIEQKFGEDARFHTCSAEGMTADELLQFLLKK 57 (77)
T ss_pred CCCcCHHHHHHHHHHHhCCCceEeecccccCCHHHHHHHHHHC
Confidence 3588999999999999998876654 4556666655543
No 479
>cd02904 Macro_H2A_like Macro domain, Macro_H2A_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. Members of this family are similar to macroH2A, a variant of the major-type core histone H2A, which contains an N-terminal H2A domain and a C-terminal nonhistone macro domain. Histone macroH2A is enriched on the inactive X chromosome of mammalian female cells. It does not bind poly ADP-r
Probab=23.26 E-value=2e+02 Score=22.18 Aligned_cols=39 Identities=18% Similarity=0.109 Sum_probs=28.2
Q ss_pred CCcEEEEccCccc---------hhchHHHHHHHHHhCCccEEEcCCCCC
Q 025054 26 PVDVVISAVGRTE---------VEDQFKLIAAIKEVGNIKRFFPTEYGS 65 (258)
Q Consensus 26 g~d~Vi~~~~~~~---------~~~~~~li~aa~~~g~vk~~v~S~~~~ 65 (258)
.+..|||++++.. ...-++.++.|.+.+ ++.+-+...+.
T Consensus 91 p~k~VIHtVgP~~~~~~~~~~L~~~~~~~L~~A~e~~-~~SIAfPaIst 138 (186)
T cd02904 91 PAKFVIHCHSPQWGSDKCEEQLEKTVKNCLAAAEDKK-LKSIAFPSLPS 138 (186)
T ss_pred CCCEEEEeCCCCCCCCchHHHHHHHHHHHHHHHHHcC-CCEEEECCccc
Confidence 4689999998742 234468888888888 99888755443
No 480
>PRK07574 formate dehydrogenase; Provisional
Probab=23.24 E-value=88 Score=27.17 Aligned_cols=49 Identities=20% Similarity=0.101 Sum_probs=31.5
Q ss_pred cccCceeEEeccCCC-------------HHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHh
Q 025054 2 LYMINCLIAQGDLHD-------------HESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEV 52 (258)
Q Consensus 2 l~~~gv~~~~~D~~d-------------~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~ 52 (258)
|+..|++++..|... ..++.++++.+|+|+.+.+... .+++++++..-+
T Consensus 211 l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~--~T~~li~~~~l~ 272 (385)
T PRK07574 211 LKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHP--ETEHLFDADVLS 272 (385)
T ss_pred HHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCH--HHHHHhCHHHHh
Confidence 445667776666431 2367788999999987776543 566777654433
No 481
>COG2403 Predicted GTPase [General function prediction only]
Probab=23.23 E-value=5.1e+02 Score=22.67 Aligned_cols=101 Identities=18% Similarity=0.163 Sum_probs=55.3
Q ss_pred ccCceeEEeccCCCHHHHHHhhC--CCc-EEEEccCccchhchHHHHHHHHHhCCccEEEc---CCCCCCCCCCCCCCCC
Q 025054 3 YMINCLIAQGDLHDHESLVKAIK--PVD-VVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP---TEYGSNVDAGHPIEPA 76 (258)
Q Consensus 3 ~~~gv~~~~~D~~d~~~l~~al~--g~d-~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~---S~~~~~~~~~~~~~~~ 76 (258)
...|+.+...+ |.+.|.+.++ ++| +|+..-. ...+...+|+.+...+| ..-..+ +.+- ....+.-.-..
T Consensus 59 ~p~Gvpi~~~k--~~~~lek~ire~~VD~~VlaySD-vs~e~v~~IaS~vLs~G-A~f~~~gP~et~~-~~ekPviaV~a 133 (449)
T COG2403 59 YPLGVPILPEK--DYDDLEKIIREKDVDIVVLAYSD-VSYEHVFRIASRVLSAG-ADFKELGPKETML-KLEKPVIAVTA 133 (449)
T ss_pred ccCCccccccc--cHHHHHHHHHHcCCCeEEEEccc-CCHHHHHHHHHHHHhCC-ceeEEeCccHHhh-hhcCceEEEEE
Confidence 44566665543 3677888887 688 5554433 33456678888888888 543332 1111 00000000000
Q ss_pred ccchhhHHH----HHHHHHhCCCCeEEEecCccccc
Q 025054 77 KSGYARKAK----IRRAIEAEGIPHTYVSCNCSFGF 108 (258)
Q Consensus 77 ~~~~~~k~~----~e~~l~~~~~~~t~lr~~~~~~~ 108 (258)
..-...|.+ +-+.|++.|.+.|++|....|+.
T Consensus 134 trtg~GKsaVS~~v~r~l~ergyrv~vVrhPmiy~~ 169 (449)
T COG2403 134 TRTGVGKSAVSRYVARLLRERGYRVCVVRHPMIYRG 169 (449)
T ss_pred eccccchhHHHHHHHHHHHHcCCceEEEecCceecC
Confidence 001112333 44566778999999999988863
No 482
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=23.22 E-value=1.4e+02 Score=25.21 Aligned_cols=87 Identities=17% Similarity=0.079 Sum_probs=48.8
Q ss_pred HHhhCCCcEEEEccCccc-------------hhchHHHHHHHHHhCCc-cEEE--cCCCCCCC-----CCCC-CCCCCcc
Q 025054 21 VKAIKPVDVVISAVGRTE-------------VEDQFKLIAAIKEVGNI-KRFF--PTEYGSNV-----DAGH-PIEPAKS 78 (258)
Q Consensus 21 ~~al~g~d~Vi~~~~~~~-------------~~~~~~li~aa~~~g~v-k~~v--~S~~~~~~-----~~~~-~~~~~~~ 78 (258)
.+.++++|+||.+++... ....+.+....++.+ - +-++ .|- ..+. .... ..++...
T Consensus 73 ~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~-~~~~iiivvsN-PvD~~t~~~~k~sg~~p~~~V 150 (322)
T cd01338 73 NVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVA-SRDVKVLVVGN-PCNTNALIAMKNAPDIPPDNF 150 (322)
T ss_pred HHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCCeEEEEecC-cHHHHHHHHHHHcCCCChHhe
Confidence 468899999999998643 345567777776655 2 2222 231 1110 0111 1333333
Q ss_pred chhhHHHHHHHH----HhCCCCeEEEecCcccccC
Q 025054 79 GYARKAKIRRAI----EAEGIPHTYVSCNCSFGFF 109 (258)
Q Consensus 79 ~~~~k~~~e~~l----~~~~~~~t~lr~~~~~~~~ 109 (258)
+..++...+++- +..+++...+|.-.++|.-
T Consensus 151 iG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeH 185 (322)
T cd01338 151 TAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNH 185 (322)
T ss_pred EEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCC
Confidence 433555544432 2368888888877778754
No 483
>COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion]
Probab=23.07 E-value=2.6e+02 Score=24.69 Aligned_cols=46 Identities=15% Similarity=0.255 Sum_probs=34.7
Q ss_pred eccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCCcce
Q 025054 139 NKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGKTLE 189 (258)
Q Consensus 139 v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~~~~ 189 (258)
+--.|+|++++.+..++ + -++..|.--.+-.|+++++.+.+|.+.+
T Consensus 130 v~ETDLGE~IlQl~~~~--P---sHIV~PAlH~~reqIa~if~ekl~~~~~ 175 (459)
T COG1139 130 VWETDLGELILQLAGEP--P---SHIVAPALHKNREQIAEIFKEKLGYEGE 175 (459)
T ss_pred EEEccHHHHHHHhcCCC--C---cceeccccccCHHHHHHHHHHhcCCCCC
Confidence 34679999999987554 2 2344455678899999999999997655
No 484
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=23.02 E-value=1.5e+02 Score=24.10 Aligned_cols=13 Identities=23% Similarity=0.524 Sum_probs=9.9
Q ss_pred CCCcEEEEccCcc
Q 025054 25 KPVDVVISAVGRT 37 (258)
Q Consensus 25 ~g~d~Vi~~~~~~ 37 (258)
.++|+|+-+++..
T Consensus 60 ~~~DvVve~t~~~ 72 (265)
T PRK13303 60 QRPDLVVECAGHA 72 (265)
T ss_pred cCCCEEEECCCHH
Confidence 4689998888764
No 485
>PRK00431 RNase III inhibitor; Provisional
Probab=22.91 E-value=3.3e+02 Score=20.40 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=27.4
Q ss_pred CcEEEEccCccc-----------hhchHHHHHHHHHhCCccEEEcCCCCCC
Q 025054 27 VDVVISAVGRTE-----------VEDQFKLIAAIKEVGNIKRFFPTEYGSN 66 (258)
Q Consensus 27 ~d~Vi~~~~~~~-----------~~~~~~li~aa~~~g~vk~~v~S~~~~~ 66 (258)
+..|||++++.. ....+++++.|.+.+ ++.+....+|..
T Consensus 75 ~~~IiH~v~P~~~~~~~~~~~~L~~~~~~~L~~a~~~~-~~sIa~P~lgtG 124 (177)
T PRK00431 75 AKYVIHTVGPVWRGGEDNEAELLASAYRNSLRLAAELG-LRSIAFPAISTG 124 (177)
T ss_pred CCEEEEecCCeecCCCCcHHHHHHHHHHHHHHHHHHcC-CceEEECccccC
Confidence 678999987642 234467777777777 998887666554
No 486
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=22.79 E-value=2.7e+02 Score=20.90 Aligned_cols=58 Identities=17% Similarity=0.171 Sum_probs=32.9
Q ss_pred hchHHHHHHHHHhCCccEEEc--CCCCCCCCCCCCCCCCccchhhHHHHHHHHHh---CCCCeE
Q 025054 40 EDQFKLIAAIKEVGNIKRFFP--TEYGSNVDAGHPIEPAKSGYARKAKIRRAIEA---EGIPHT 98 (258)
Q Consensus 40 ~~~~~li~aa~~~g~vk~~v~--S~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~---~~~~~t 98 (258)
..-+..+.+.++.| ++.+|. +.++.....++...+..-+...+-.++..|++ .|+++.
T Consensus 20 ~~W~~~~~~m~~~G-idtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~ 82 (166)
T PF14488_consen 20 AQWREEFRAMKAIG-IDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVF 82 (166)
T ss_pred HHHHHHHHHHHHcC-CcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEE
Confidence 34467888999999 999885 66554322222111111122355567777765 577644
No 487
>PRK14829 undecaprenyl pyrophosphate synthase; Provisional
Probab=22.76 E-value=2.8e+02 Score=22.41 Aligned_cols=65 Identities=14% Similarity=0.005 Sum_probs=35.5
Q ss_pred hHHHHHHHHhcCC-CCCCceEEEcCCCCccCHHHHHHHHHHHh----CCcceeEecCHHHHHHHHHhccCcc
Q 025054 143 DIATYTIKAVDDP-RTLNKTLYLRPPKNIYSFKELVALWEKKI----GKTLEKIYVTEDQILQMIQDASNED 209 (258)
Q Consensus 143 D~a~~~~~~l~~~-~~~~~~~~l~g~~~~~t~~e~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~ 209 (258)
|+-+.+..+-+.. ...+-.++++- ..-+-.|+++++.+.. ........++.+.+.+.+...++|+
T Consensus 116 ~~~~~i~~~e~~T~~~~~~~Lnia~--~Y~gr~EI~~A~~~~~~~~~~g~~~~~~i~e~~i~~~L~~~~~pd 185 (243)
T PRK14829 116 SVIDELEAAEELTKNNTTMDLVFCV--NYGGRAEIADAAAAIAREVRDGKISGDRVTEKMISDHLYNPDMPD 185 (243)
T ss_pred HHHHHHHHHHHHhccCCceEEEEEe--cCCCHHHHHHHHHHHHHHHHcCCCChHhCCHHHHHHHhccCCCCC
Confidence 4444444443322 12344677773 3566778888777654 2234445567666666665444553
No 488
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=22.75 E-value=1.2e+02 Score=25.43 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=22.9
Q ss_pred HHHHHHhhCCCcEEEEccCccchhchHHHHHHH
Q 025054 17 HESLVKAIKPVDVVISAVGRTEVEDQFKLIAAI 49 (258)
Q Consensus 17 ~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa 49 (258)
.+++.++++++|+|+.+.+... .+++++++.
T Consensus 181 ~~~l~e~l~~aDvvv~~lPlt~--~T~~li~~~ 211 (312)
T PRK15469 181 REELSAFLSQTRVLINLLPNTP--ETVGIINQQ 211 (312)
T ss_pred cccHHHHHhcCCEEEECCCCCH--HHHHHhHHH
Confidence 3578899999999988877643 466676643
No 489
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=22.60 E-value=80 Score=27.22 Aligned_cols=36 Identities=14% Similarity=0.115 Sum_probs=28.0
Q ss_pred cccCceeEEeccCCCHHHHHHhhCCCcEEEEccCcc
Q 025054 2 LYMINCLIAQGDLHDHESLVKAIKPVDVVISAVGRT 37 (258)
Q Consensus 2 l~~~gv~~~~~D~~d~~~l~~al~g~d~Vi~~~~~~ 37 (258)
|...|.++...|.++.++..++++++|.||.+++..
T Consensus 118 l~~~G~~V~~~d~~~~~~~~~~~~~aDlVilavP~~ 153 (374)
T PRK11199 118 LTLSGYQVRILEQDDWDRAEDILADAGMVIVSVPIH 153 (374)
T ss_pred HHHCCCeEEEeCCCcchhHHHHHhcCCEEEEeCcHH
Confidence 345677788888766667778889999999998765
No 490
>PRK06767 methionine gamma-lyase; Provisional
Probab=22.55 E-value=2.9e+02 Score=23.82 Aligned_cols=58 Identities=12% Similarity=0.197 Sum_probs=37.9
Q ss_pred CceeEEeccCCCHHHHHHhhCC-CcEEEEccCccc---hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 5 INCLIAQGDLHDHESLVKAIKP-VDVVISAVGRTE---VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 5 ~gv~~~~~D~~d~~~l~~al~g-~d~Vi~~~~~~~---~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
.|+++...|..|.+.+.++++. ...|+....... +.....|.+.|++.| +.-++-.++
T Consensus 124 ~gi~~~~~~~~d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g-~~vivD~a~ 185 (386)
T PRK06767 124 FMITHSFCDMETEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNG-LLVIVDNTF 185 (386)
T ss_pred cCeEEEEeCCCCHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcC-CEEEEECCC
Confidence 4677777788899999998864 555553322211 344578888888888 665554444
No 491
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=22.54 E-value=1.2e+02 Score=24.39 Aligned_cols=37 Identities=32% Similarity=0.477 Sum_probs=30.2
Q ss_pred hhCCCcEEEEccCccc--hhchHHHHHHHHHhCCccEEEc
Q 025054 23 AIKPVDVVISAVGRTE--VEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 23 al~g~d~Vi~~~~~~~--~~~~~~li~aa~~~g~vk~~v~ 60 (258)
..+++|.|+-.+.++. +...+++-+.+.+.| +|++..
T Consensus 152 ~~~~vD~vivVvDpS~~sl~taeri~~L~~elg-~k~i~~ 190 (255)
T COG3640 152 TIEGVDLVIVVVDPSYKSLRTAERIKELAEELG-IKRIFV 190 (255)
T ss_pred cccCCCEEEEEeCCcHHHHHHHHHHHHHHHHhC-CceEEE
Confidence 3458999998887764 778889999999999 999765
No 492
>PRK02079 pyrroloquinoline quinone biosynthesis protein PqqD; Provisional
Probab=22.41 E-value=2.2e+02 Score=18.86 Aligned_cols=35 Identities=11% Similarity=0.094 Sum_probs=28.5
Q ss_pred eeeccchHHHHHHHHhcCCCCCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 025054 137 IFNKEEDIATYTIKAVDDPRTLNKTLYLRPPKNIYSFKELVALWEKKIGK 186 (258)
Q Consensus 137 ~~v~~~D~a~~~~~~l~~~~~~~~~~~l~g~~~~~t~~e~~~~~~~~~g~ 186 (258)
.+|..+++|.++...++. .-|..|+++.+.+.+|.
T Consensus 30 gmi~Lnetg~~Iw~~~DG---------------~~tv~eIi~~L~~~y~~ 64 (88)
T PRK02079 30 GMIKLNESAGEILGLIDG---------------KRTVAAIIAELQQQFPD 64 (88)
T ss_pred eeeeechHHHHHHHHccC---------------CCCHHHHHHHHHHHccc
Confidence 378999999999998763 34788999999998854
No 493
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=22.39 E-value=1.7e+02 Score=26.00 Aligned_cols=52 Identities=17% Similarity=0.169 Sum_probs=38.8
Q ss_pred cccCceeEEeccCC----CHHHHHHhhCC--CcEEEEccCccc-------hhchHHHHHHHHHhC
Q 025054 2 LYMINCLIAQGDLH----DHESLVKAIKP--VDVVISAVGRTE-------VEDQFKLIAAIKEVG 53 (258)
Q Consensus 2 l~~~gv~~~~~D~~----d~~~l~~al~g--~d~Vi~~~~~~~-------~~~~~~li~aa~~~g 53 (258)
++..|++++..+++ |++.|.++++. +..++......+ .+.-+.|++.|++.+
T Consensus 196 ~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~ 260 (459)
T COG1167 196 LEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYD 260 (459)
T ss_pred HHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcC
Confidence 34568888877665 68899999884 777777665543 566689999998887
No 494
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=22.17 E-value=1.9e+02 Score=21.77 Aligned_cols=41 Identities=22% Similarity=0.208 Sum_probs=20.4
Q ss_pred CHHHHHHhhCCCcEEEEccCccchhchHHHHHHHHHhCCccEEEc
Q 025054 16 DHESLVKAIKPVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFP 60 (258)
Q Consensus 16 d~~~l~~al~g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~ 60 (258)
+...+.+.| |.+..+..... .......++.+++.| ++-+|-
T Consensus 91 ~~~~~~~ll-~~~i~~~~~~~--~~e~~~~i~~~~~~G-~~viVG 131 (176)
T PF06506_consen 91 GLESIEELL-GVDIKIYPYDS--EEEIEAAIKQAKAEG-VDVIVG 131 (176)
T ss_dssp CHHHHHHHH-T-EEEEEEESS--HHHHHHHHHHHHHTT---EEEE
T ss_pred HHHHHHHHh-CCceEEEEECC--HHHHHHHHHHHHHcC-CcEEEC
Confidence 456666666 56665544432 223445555666666 665553
No 495
>PRK09875 putative hydrolase; Provisional
Probab=22.04 E-value=3.5e+02 Score=22.51 Aligned_cols=74 Identities=18% Similarity=0.184 Sum_probs=43.5
Q ss_pred CCcEEEEccCccchhchHHHHHHHHHhCCccEEEcCCCCCCCCCCCCCCCCccch-hhHHHHHHHHHh--CCCCeEEEec
Q 025054 26 PVDVVISAVGRTEVEDQFKLIAAIKEVGNIKRFFPTEYGSNVDAGHPIEPAKSGY-ARKAKIRRAIEA--EGIPHTYVSC 102 (258)
Q Consensus 26 g~d~Vi~~~~~~~~~~~~~li~aa~~~g~vk~~v~S~~~~~~~~~~~~~~~~~~~-~~k~~~e~~l~~--~~~~~t~lr~ 102 (258)
|..+|+.+++...-.-...+.+.++++| |.-+..+.|...... |..-.. .....++.++++ .|+.-|-+|+
T Consensus 47 Gg~tiVd~T~~g~GRd~~~l~~is~~tg-v~Iv~~TG~y~~~~~-----p~~~~~~~~e~la~~~i~ei~~Gi~gt~ika 120 (292)
T PRK09875 47 GVRNVIEMTNRYMGRNAQFMLDVMRETG-INVVACTGYYQDAFF-----PEHVATRSVQELAQEMVDEIEQGIDGTELKA 120 (292)
T ss_pred CCCeEEecCCCccCcCHHHHHHHHHHhC-CcEEEcCcCCCCccC-----CHHHhcCCHHHHHHHHHHHHHHhhccCCCcc
Confidence 8899998886544344566777888899 765555655432211 111111 123444555555 5777778888
Q ss_pred Ccc
Q 025054 103 NCS 105 (258)
Q Consensus 103 ~~~ 105 (258)
|.+
T Consensus 121 GvI 123 (292)
T PRK09875 121 GII 123 (292)
T ss_pred cEE
Confidence 764
No 496
>PRK14831 undecaprenyl pyrophosphate synthase; Provisional
Probab=21.66 E-value=3.1e+02 Score=22.22 Aligned_cols=66 Identities=11% Similarity=0.053 Sum_probs=37.8
Q ss_pred chHHHHHHHHhcCCC-CCCceEEEcCCCCccCHHHHHHHHHHHh----CCcceeEecCHHHHHHHHHhccCcc
Q 025054 142 EDIATYTIKAVDDPR-TLNKTLYLRPPKNIYSFKELVALWEKKI----GKTLEKIYVTEDQILQMIQDASNED 209 (258)
Q Consensus 142 ~D~a~~~~~~l~~~~-~~~~~~~l~g~~~~~t~~e~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~ 209 (258)
+++.+.+..+.+..+ ..+-.++++- ..-+-.|+++++.+.. ...+....++.+.+.+.+...++|+
T Consensus 121 ~~l~~~i~~~e~~T~~~~~~~Lnia~--~Yggr~EIv~A~~~l~~~v~~g~l~~~~i~e~~~~~~L~t~~~pd 191 (249)
T PRK14831 121 KSLQEEISRSTELTKNNNGIHFNVCT--NYGGRQEIVQAARAIAQQVQQGELDPSEIDENLFESELYTAGIKD 191 (249)
T ss_pred HHHHHHHHHHHHHhccCCceEEEEEe--cCCCHHHHHHHHHHHHHHHHcCCCChHhCCHHHHHHhhccCCCCC
Confidence 455555555444332 2455778873 3666778888877764 2234455677776766665444443
No 497
>cd02908 Macro_Appr_pase_like Macro domain, Appr-1"-pase_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. This family is composed of uncharacterized proteins that show similarity to Appr-1"-pase, containing conserved putative active site residues. Appr-1"-pase is a phosphatase specific for ADP-ribose-1"-monophosphate.
Probab=21.59 E-value=3.4e+02 Score=20.08 Aligned_cols=40 Identities=18% Similarity=0.202 Sum_probs=28.0
Q ss_pred CCcEEEEccCccc-----------hhchHHHHHHHHHhCCccEEEcCCCCCC
Q 025054 26 PVDVVISAVGRTE-----------VEDQFKLIAAIKEVGNIKRFFPTEYGSN 66 (258)
Q Consensus 26 g~d~Vi~~~~~~~-----------~~~~~~li~aa~~~g~vk~~v~S~~~~~ 66 (258)
++..|||++++.. ....+++++.|.+.+ ++.+.+..++..
T Consensus 67 ~~~~IiH~v~P~~~~~~~~~~~~L~~~~~~~L~~a~~~~-~~sIa~P~igtG 117 (165)
T cd02908 67 PAKYVIHTVGPVWRGGQHNEAELLASCYRNSLELARENG-LRSIAFPAISTG 117 (165)
T ss_pred CCCEEEEEcCCcccCCCCcHHHHHHHHHHHHHHHHHHcC-CCEEEECceecC
Confidence 4679999987642 234567777778888 998887555543
No 498
>COG0696 GpmI Phosphoglyceromutase [Carbohydrate transport and metabolism]
Probab=21.58 E-value=3.1e+02 Score=24.70 Aligned_cols=50 Identities=20% Similarity=0.433 Sum_probs=33.5
Q ss_pred EeccCCCHHHHHHhhCCCc---EEEEccCccc-------hhchHHHHHHHHHhCCccEE-Ec
Q 025054 10 AQGDLHDHESLVKAIKPVD---VVISAVGRTE-------VEDQFKLIAAIKEVGNIKRF-FP 60 (258)
Q Consensus 10 ~~~D~~d~~~l~~al~g~d---~Vi~~~~~~~-------~~~~~~li~aa~~~g~vk~~-v~ 60 (258)
-.+|+.+-..|..+++.+. ..+|+.+... ......+++.|++.| ++.+ ++
T Consensus 87 e~g~f~~n~~l~~~~~~v~~~~~~lHlmGl~S~GGVHSh~~Hl~ali~~a~k~g-~~kV~~H 147 (509)
T COG0696 87 EDGSFFENPALLNAIDEVKANGSALHLMGLVSDGGVHSHIDHLLALIELAAKNG-MKKVYLH 147 (509)
T ss_pred hcCcccccHHHHHHHHHhhhcCceEEEEecccCCcccchHHHHHHHHHHHHhcC-CcEEEEE
Confidence 3455656667777777554 5677765422 566788999999998 8554 45
No 499
>PRK05776 DNA topoisomerase I; Provisional
Probab=21.57 E-value=1.4e+02 Score=28.15 Aligned_cols=47 Identities=19% Similarity=0.075 Sum_probs=33.5
Q ss_pred HHHHHHhhCCCcEEEEccCccc--hhchHHHHHHHHHhCCccEEEcCCC
Q 025054 17 HESLVKAIKPVDVVISAVGRTE--VEDQFKLIAAIKEVGNIKRFFPTEY 63 (258)
Q Consensus 17 ~~~l~~al~g~d~Vi~~~~~~~--~~~~~~li~aa~~~g~vk~~v~S~~ 63 (258)
...|.++++++|.||++..++. -....++++.+...+.++|+.+|+.
T Consensus 87 ~~~lk~l~k~ad~iiiAtD~DREGE~I~~~i~~~~~~~~~v~R~~fs~i 135 (670)
T PRK05776 87 YELLSSLSKYADEFINACDYDIEGSVIGYLIIKYLGDPKKAKRMKFSAL 135 (670)
T ss_pred HHHHHHHHhcCCEEEECCCCChhHHHHHHHHHHHhCCCCCeeEEEEccC
Confidence 3467777789999999998865 2334567777764334899998764
No 500
>PRK07561 DNA topoisomerase I subunit omega; Validated
Probab=21.51 E-value=1.4e+02 Score=29.13 Aligned_cols=47 Identities=21% Similarity=0.181 Sum_probs=34.0
Q ss_pred HHHHHHhhCCCcEEEEccCccc--hhchHHHHHHHH-HhCCccEEEcCCC
Q 025054 17 HESLVKAIKPVDVVISAVGRTE--VEDQFKLIAAIK-EVGNIKRFFPTEY 63 (258)
Q Consensus 17 ~~~l~~al~g~d~Vi~~~~~~~--~~~~~~li~aa~-~~g~vk~~v~S~~ 63 (258)
...|.++++++|.||++..++. -....+|++.+. ....|+|+.+|++
T Consensus 77 ~~~lk~~~k~ad~iilAtD~DREGE~I~~~i~~~l~~~~~~v~Ri~f~~i 126 (859)
T PRK07561 77 VSELKKAAKDADELYLATDPDREGEAIAWHLLEVLGGDDVPVKRVVFNEI 126 (859)
T ss_pred HHHHHHHHhcCCEEEECCCCCccchHHHHHHHHHhCCCCCCeEEEEEccC
Confidence 3567778889999999988765 334456777776 3334999999765
Done!