BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025057
(258 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224126447|ref|XP_002329556.1| predicted protein [Populus trichocarpa]
gi|118483146|gb|ABK93479.1| unknown [Populus trichocarpa]
gi|222870265|gb|EEF07396.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/224 (71%), Positives = 180/224 (80%), Gaps = 17/224 (7%)
Query: 1 MEVATASAPIFGLRTRMLATPPRTSPRTVNCNRNLSTS----------------FISPFA 44
M VATA+A FG RMLA+P S R +N NR L+ S F+SPFA
Sbjct: 1 MAVATATASSFGFHKRMLASP-TVSSRIINPNRTLALSSSPSTSSSSRASLSTCFLSPFA 59
Query: 45 NGSVSSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNR 104
GS++ DFSG ++RP+CLNP S SK + V+TMVIP+T G+AWEQPPPDLASYL+KNR
Sbjct: 60 GGSITCDFSGTKIRPECLNPASISSSKGKRSVVTMVIPYTRGSAWEQPPPDLASYLFKNR 119
Query: 105 IVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDV 164
IVYLGMS VPSVTELILAEFLYLQYED EKPIYLYINSTGTTKGGEKLGYETEAFAIYDV
Sbjct: 120 IVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAIYDV 179
Query: 165 MGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
MGYVKPPIFTLCVGNAWGEAALLL AG++GNR+ALPSSTIM+KQ
Sbjct: 180 MGYVKPPIFTLCVGNAWGEAALLLAAGSRGNRSALPSSTIMMKQ 223
>gi|255580803|ref|XP_002531222.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223529182|gb|EEF31158.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 314
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/228 (67%), Positives = 174/228 (76%), Gaps = 21/228 (9%)
Query: 1 MEVATASAPIFGLRTRMLATPPRTSPRTVNCNRNLSTSFISPFANGS------------- 47
MEVATA+A L TRMLA+ P S T + NR L+ S S ++
Sbjct: 1 MEVATATASTVALHTRMLASTPICS-HTSSSNRTLAFSSSSSSSSSPSLRSSSLSTSFFS 59
Query: 48 -------VSSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYL 100
V DFSG+++RP+CLNP S + + V+TMVIP+T G+AWEQPPPDLASYL
Sbjct: 60 SFSGSGSVIGDFSGMKVRPECLNPASISNFRGKRSVVTMVIPYTRGSAWEQPPPDLASYL 119
Query: 101 YKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFA 160
+KNRIVYLGMS VPSVTELILAEFLYLQYED EKPIYLYINSTGTTKGGEKLGYETEAFA
Sbjct: 120 FKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFA 179
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I+DVMGYVKPPIFTLCVGNAWGEAALLL AG+KGNR+ALPSSTIMIKQ
Sbjct: 180 IHDVMGYVKPPIFTLCVGNAWGEAALLLAAGSKGNRSALPSSTIMIKQ 227
>gi|297800408|ref|XP_002868088.1| hypothetical protein ARALYDRAFT_493172 [Arabidopsis lyrata subsp.
lyrata]
gi|297313924|gb|EFH44347.1| hypothetical protein ARALYDRAFT_493172 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 139/170 (81%), Positives = 152/170 (89%)
Query: 39 FISPFANGSVSSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLAS 98
F+SP+ GS+SSDF G +LR + LNP + SKP+ V+TMVIPF+ G+A EQPPPDLAS
Sbjct: 49 FLSPYTGGSISSDFCGAKLRAESLNPLNLSSSKPKRGVVTMVIPFSKGSAHEQPPPDLAS 108
Query: 99 YLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEA 158
YL+KNRIVYLGMS VPSVTELILAEFLYLQYED EKPIYLYINSTGTTK GEKLGY+TEA
Sbjct: 109 YLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEA 168
Query: 159 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
FAIYDVMGYVKPPIFTLCVGNAWGEAALLL AGAKGNR+ALPSSTIMIKQ
Sbjct: 169 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQ 218
>gi|18414804|ref|NP_567521.1| ATP-dependent Clp protease proteolytic subunit-related protein 4
[Arabidopsis thaliana]
gi|75301253|sp|Q8LB10.1|CLPR4_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 4, chloroplastic; Short=ClpR4;
Flags: Precursor
gi|21593086|gb|AAM65035.1| ATP-dependent Clp protease proteolytic subunit ClpR4, putative
[Arabidopsis thaliana]
gi|26450085|dbj|BAC42162.1| putative ClpP protease complex subunit ClpR4 [Arabidopsis thaliana]
gi|332658442|gb|AEE83842.1| ATP-dependent Clp protease proteolytic subunit-related protein 4
[Arabidopsis thaliana]
Length = 305
Score = 293 bits (750), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 139/170 (81%), Positives = 152/170 (89%)
Query: 39 FISPFANGSVSSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLAS 98
F+SP+ GS+SSD G +LR + LNP +F SKP+ V+TMVIPF+ G+A EQPPPDLAS
Sbjct: 49 FLSPYTGGSISSDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLAS 108
Query: 99 YLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEA 158
YL+KNRIVYLGMS VPSVTELILAEFLYLQYED EKPIYLYINSTGTTK GEKLGY+TEA
Sbjct: 109 YLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEA 168
Query: 159 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
FAIYDVMGYVKPPIFTLCVGNAWGEAALLL AGAKGNR+ALPSSTIMIKQ
Sbjct: 169 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQ 218
>gi|2245061|emb|CAB10484.1| Clp proteinase like protein [Arabidopsis thaliana]
gi|7268455|emb|CAB80975.1| Clp proteinase like protein [Arabidopsis thaliana]
Length = 241
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/170 (81%), Positives = 152/170 (89%)
Query: 39 FISPFANGSVSSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLAS 98
F+SP+ GS+SSD G +LR + LNP +F SKP+ V+TMVIPF+ G+A EQPPPDLAS
Sbjct: 49 FLSPYTGGSISSDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLAS 108
Query: 99 YLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEA 158
YL+KNRIVYLGMS VPSVTELILAEFLYLQYED EKPIYLYINSTGTTK GEKLGY+TEA
Sbjct: 109 YLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEA 168
Query: 159 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
FAIYDVMGYVKPPIFTLCVGNAWGEAALLL AGAKGNR+ALPSSTIMIKQ
Sbjct: 169 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQ 218
>gi|19698857|gb|AAL91164.1| unknown protein [Arabidopsis thaliana]
gi|23197684|gb|AAN15369.1| unknown protein [Arabidopsis thaliana]
Length = 305
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/170 (81%), Positives = 152/170 (89%)
Query: 39 FISPFANGSVSSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLAS 98
F+SP+ GS+SSD G +LR + LNP +F SKP+ V+TMVIPF+ G+A EQPPPDLAS
Sbjct: 49 FLSPYTGGSISSDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLAS 108
Query: 99 YLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEA 158
YL+KNRIVYLGMS VPSVTELILAEFLYLQYED +KPIYLYINSTGTTK GEKLGY+TEA
Sbjct: 109 YLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEKKPIYLYINSTGTTKNGEKLGYDTEA 168
Query: 159 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
FAIYDVMGYVKPPIFTLCVGNAWGEAALLL AGAKGNR+ALPSSTIMIKQ
Sbjct: 169 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQ 218
>gi|260766931|gb|ACX50407.1| ATP-dependent Clp protease [Eriobotrya japonica]
Length = 305
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/220 (75%), Positives = 177/220 (80%), Gaps = 15/220 (6%)
Query: 1 MEVATASAPIFGLRTRMLATPPRTSPRTVNCNR------------NLSTSFISPFANGSV 48
MEVAT +A F L TRMLATP T PR N R +LSTSF+ PFA S+
Sbjct: 1 MEVAT-TASSFALHTRMLATP--TIPRARNTTRPHPTSSRSLPRASLSTSFLCPFAGNSL 57
Query: 49 SSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYL 108
SS+FSG +LRP LNP SF S+P+ V+TMVI F G+AWEQPPPDLASYLYKNRIVYL
Sbjct: 58 SSEFSGHKLRPSSLNPASFRGSEPKRGVVTMVILFQRGSAWEQPPPDLASYLYKNRIVYL 117
Query: 109 GMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYV 168
GMS VPSVTELILAEFLYLQYED KPIYLYINSTGTTKGGEKLGYETEAFAIYDVM YV
Sbjct: 118 GMSLVPSVTELILAEFLYLQYEDDTKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYV 177
Query: 169 KPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
KPPIFTLCVGNAWGEAALLL AGAKGNR+ALPSSTIM+KQ
Sbjct: 178 KPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMMKQ 217
>gi|356563393|ref|XP_003549948.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like [Glycine max]
Length = 304
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 172/269 (63%), Positives = 193/269 (71%), Gaps = 24/269 (8%)
Query: 1 MEVATASAPIFGLRTRMLATPPRTSPRTVNCNR-----------NLSTSFISPFAN-GSV 48
MEVATA++ F L MLA P +S RTV R +LSTSF++P+A S
Sbjct: 1 MEVATAASS-FALNKPMLALP--SSSRTVTPIRCMNTSTSPVRTSLSTSFVAPYAGICSA 57
Query: 49 SSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYL 108
SS FSG +LRP LNP SF S + V+TMVIPF G+AWEQPPPDLASYLYKNRIVYL
Sbjct: 58 SSPFSGHKLRPSSLNPASFLGSNAKRGVVTMVIPFQRGSAWEQPPPDLASYLYKNRIVYL 117
Query: 109 GMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYV 168
GMS VPSVTELILAEFLYLQYED +KPIYLYINSTGTTKGGEKLGYETEAFAIYDVM YV
Sbjct: 118 GMSLVPSVTELILAEFLYLQYEDDDKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYV 177
Query: 169 KPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQAGDTGICLLKSSLTWLNSVK 228
KPPIFTLCVGNAWGEAALLL AGAKGNR+ALPSSTIMI+Q I + T +N +
Sbjct: 178 KPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIRQP----IARFQGQATDVNLAR 233
Query: 229 LNVLILSLPICSQLGGLKVKQQMSKLPEK 257
V + ++L L K M K PE+
Sbjct: 234 REV----NNVKTELVKLYAK-HMEKTPEQ 257
>gi|449459004|ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like [Cucumis sativus]
gi|449510487|ref|XP_004163680.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like [Cucumis sativus]
Length = 304
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/220 (70%), Positives = 171/220 (77%), Gaps = 15/220 (6%)
Query: 1 MEVATASAPIFGLRTRMLATPPRTSPRTVNCNRNLS------------TSFISPFANGSV 48
MEVAT +A F L R+ +P TS NR LS T+F+ PFA GSV
Sbjct: 1 MEVAT-TASSFALTKRI--SPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSV 57
Query: 49 SSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYL 108
S +FSG++LRP LNP+ SK + V+TMVIPF G+AWEQPPPDLASYLYKNRIVYL
Sbjct: 58 SGEFSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYL 117
Query: 109 GMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYV 168
GMS VPSVTELILAEFLYLQYED KPIYLY+NSTGTTKGGEKLGYETEAFA+YDVM YV
Sbjct: 118 GMSLVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYV 177
Query: 169 KPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
KPPIFTLCVGNAWGEAALLL AGA GNR+ALPSSTIMIK+
Sbjct: 178 KPPIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKE 217
>gi|359495737|ref|XP_003635075.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like [Vitis vinifera]
Length = 297
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/213 (70%), Positives = 171/213 (80%), Gaps = 8/213 (3%)
Query: 1 MEVATASAPIFGLRTRMLATPPRTSPRTVNCNRNLST-----SFISPFANGSVSSDFSGL 55
M VAT ++ +F TRMLA P T+ T + NR L++ + +SP+ GSV+SDFSG
Sbjct: 1 MGVATMASNLF-THTRMLAPP--TNSGTTSSNRTLASFSLRANLLSPYVGGSVASDFSGQ 57
Query: 56 RLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS 115
++RP L SF S + +TMVIPFT G+A +QPPPDL SYL+KNRIVYLGMS VPS
Sbjct: 58 KIRPSSLYSASFSGSHAKRGGVTMVIPFTRGSALDQPPPDLPSYLFKNRIVYLGMSLVPS 117
Query: 116 VTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTL 175
VTELILAEFLYLQY+D EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVK PIFTL
Sbjct: 118 VTELILAEFLYLQYDDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKSPIFTL 177
Query: 176 CVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
CVGNAWGEAALLL AGAKGNR+ALPSSTIMIKQ
Sbjct: 178 CVGNAWGEAALLLAAGAKGNRSALPSSTIMIKQ 210
>gi|359807363|ref|NP_001241125.1| uncharacterized protein LOC100785827 [Glycine max]
gi|255635880|gb|ACU18287.1| unknown [Glycine max]
Length = 304
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 165/269 (61%), Positives = 188/269 (69%), Gaps = 24/269 (8%)
Query: 1 MEVATASAPIFGLRTRMLATPPRTSPRTVNCNR-----------NLSTSFISPFAN-GSV 48
MEVAT ++ I L MLA P +S RT R +LS++F++P+ S
Sbjct: 1 MEVATTASSI-ALNKPMLALP--SSSRTATPIRAMNSSTSSVRTSLSSNFVAPYTGINSA 57
Query: 49 SSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYL 108
S FSG +LR LNP SF S + V+TMVIPF G+AWEQPPPDLASYLYKNRIVYL
Sbjct: 58 YSLFSGHKLRLSSLNPGSFRGSNSKRGVVTMVIPFQRGSAWEQPPPDLASYLYKNRIVYL 117
Query: 109 GMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYV 168
GMS VPSVTELILAEFLYLQYED +KPIYLYINSTGTTKGGEKLGYETEAFAIYDVM YV
Sbjct: 118 GMSLVPSVTELILAEFLYLQYEDDDKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYV 177
Query: 169 KPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQAGDTGICLLKSSLTWLNSVK 228
KPPIFTLCVGNAWGEAALLL AGAKGNR+ALPSSTIMI+Q I + T +N +
Sbjct: 178 KPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIRQP----IARFQGQATDVNLAR 233
Query: 229 LNVLILSLPICSQLGGLKVKQQMSKLPEK 257
V + ++L L K M K PE+
Sbjct: 234 REV----NNVKTELVKLYAK-HMEKTPEQ 257
>gi|297745678|emb|CBI40932.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/197 (73%), Positives = 161/197 (81%), Gaps = 7/197 (3%)
Query: 17 MLATPPRTSPRTVNCNRNLST-----SFISPFANGSVSSDFSGLRLRPDCLNPDSFCKSK 71
MLA P T+ T + NR L++ + +SP+ GSV+SDFSG ++RP L SF S
Sbjct: 1 MLAPP--TNSGTTSSNRTLASFSLRANLLSPYVGGSVASDFSGQKIRPSSLYSASFSGSH 58
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
+ +TMVIPFT G+A +QPPPDL SYL+KNRIVYLGMS VPSVTELILAEFLYLQY+D
Sbjct: 59 AKRGGVTMVIPFTRGSALDQPPPDLPSYLFKNRIVYLGMSLVPSVTELILAEFLYLQYDD 118
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVK PIFTLCVGNAWGEAALLL AG
Sbjct: 119 AEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKSPIFTLCVGNAWGEAALLLAAG 178
Query: 192 AKGNRAALPSSTIMIKQ 208
AKGNR+ALPSSTIMIKQ
Sbjct: 179 AKGNRSALPSSTIMIKQ 195
>gi|418731097|gb|AFX67013.1| ATP-dependent Clp protease proteolytic subunit [Solanum tuberosum]
Length = 301
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/203 (73%), Positives = 161/203 (79%), Gaps = 13/203 (6%)
Query: 6 ASAPIFGLRTRMLATPPRTSPRTVNCNRNLSTSFISPFANGSVSSDFSGLRLRPDCLNPD 65
ASAP LR +PP S +LSTSFISPF GS+ SD SG R+RPD L P
Sbjct: 26 ASAPKRNLR----FSPPTKS--------SLSTSFISPFVGGSLFSDLSGQRIRPDSLYPS 73
Query: 66 SFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFL 125
S P+ V+TMVIPF SG ++ PPDLASYL+KNRIVYLGMS VPSVTELILAEFL
Sbjct: 74 SSTGFIPKRAVVTMVIPF-SGDPSQEHPPDLASYLFKNRIVYLGMSLVPSVTELILAEFL 132
Query: 126 YLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAA 185
YLQYED +KPIYLYINSTGTTKGGEKLGYETEAFA+YDVM YVKPPIFTLCVGNAWGEAA
Sbjct: 133 YLQYEDEDKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMSYVKPPIFTLCVGNAWGEAA 192
Query: 186 LLLGAGAKGNRAALPSSTIMIKQ 208
LLL AGAKGNRAALPSSTIMIKQ
Sbjct: 193 LLLAAGAKGNRAALPSSTIMIKQ 215
>gi|217069988|gb|ACJ83354.1| unknown [Medicago truncatula]
Length = 216
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/218 (67%), Positives = 172/218 (78%), Gaps = 13/218 (5%)
Query: 1 MEVATASAPIFGLRTR-MLATPPRTSPRTVNCNR---------NLSTSFISPF-ANGSVS 49
MEVATA+ L + ML +P +S RT++ R ++ST F++P A S +
Sbjct: 1 MEVATANVSFTFLSKKPMLISP--SSSRTLSPIRPIKSSFFRNSISTDFVAPSSAITSST 58
Query: 50 SDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLG 109
S FSG +LRP CLNP +F S + V+TMVIPF+ GTAWEQPPPDLASYLYKNRIVYLG
Sbjct: 59 SHFSGHKLRPPCLNPATFQSSGSKRGVVTMVIPFSRGTAWEQPPPDLASYLYKNRIVYLG 118
Query: 110 MSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVK 169
MS VPSVTEL++AEFLYLQY+D KPIY+YINSTGTTKGGEKLGYETEA A+YD+M Y+K
Sbjct: 119 MSLVPSVTELMVAEFLYLQYDDETKPIYMYINSTGTTKGGEKLGYETEALAVYDLMRYIK 178
Query: 170 PPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIK 207
PPIFTLCVGNAWGEAALLL AGAKGNR+ALPSSTIMI+
Sbjct: 179 PPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIR 216
>gi|168007320|ref|XP_001756356.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692395|gb|EDQ78752.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 241
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 122/140 (87%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
+S+ R V+TMVIPF G A +QPPPDL SYL+KNRIV+L MS VP+VTEL++AE LYLQ
Sbjct: 16 QSRGRRGVVTMVIPFQRGDARQQPPPDLPSYLFKNRIVFLAMSLVPAVTELVMAELLYLQ 75
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
Y+D EK IY+YINSTGTTK GEKLGYETEAFAIYD M YVKPPIFTLCVGNAWGEAALLL
Sbjct: 76 YDDPEKSIYMYINSTGTTKDGEKLGYETEAFAIYDTMRYVKPPIFTLCVGNAWGEAALLL 135
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
AG+KGNRA LPS+TIM+KQ
Sbjct: 136 AAGSKGNRACLPSATIMLKQ 155
>gi|168049469|ref|XP_001777185.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671413|gb|EDQ57965.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 107/141 (75%), Positives = 121/141 (85%)
Query: 68 CKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYL 127
+ + R V+TMVIPF G A +QPPPDL SYL+KNRIV+L MS VP+VTEL++AE LYL
Sbjct: 11 TQGRGRRGVVTMVIPFQRGDARQQPPPDLPSYLFKNRIVFLAMSLVPAVTELVMAELLYL 70
Query: 128 QYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALL 187
QY+D EK IY+YINSTGTTK GEKLGYETEAFAIYD M YVKPPIFTLCVGNAWGEAALL
Sbjct: 71 QYDDPEKSIYMYINSTGTTKDGEKLGYETEAFAIYDTMRYVKPPIFTLCVGNAWGEAALL 130
Query: 188 LGAGAKGNRAALPSSTIMIKQ 208
L AG+KGNRA LPS+TIM+KQ
Sbjct: 131 LAAGSKGNRACLPSATIMLKQ 151
>gi|168033939|ref|XP_001769471.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679182|gb|EDQ65632.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/136 (77%), Positives = 118/136 (86%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
RS V+TMVIPF G A +QPPPDL SYL+KNRIV+L MS VP+ TEL +AE LYLQY+D
Sbjct: 16 RSGVVTMVIPFQRGDARQQPPPDLPSYLFKNRIVFLAMSLVPAFTELFMAELLYLQYDDP 75
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
E+ IY+YINSTGTTK GEKLGYETEAFAIYD M Y+KPPIFTLCVGNAWGEAALLL AG+
Sbjct: 76 EESIYMYINSTGTTKDGEKLGYETEAFAIYDTMRYMKPPIFTLCVGNAWGEAALLLAAGS 135
Query: 193 KGNRAALPSSTIMIKQ 208
KGNRA LPS+TIM+KQ
Sbjct: 136 KGNRACLPSATIMLKQ 151
>gi|115435898|ref|NP_001042707.1| Os01g0271400 [Oryza sativa Japonica Group]
gi|113532238|dbj|BAF04621.1| Os01g0271400 [Oryza sativa Japonica Group]
Length = 298
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/133 (87%), Positives = 122/133 (91%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
V+ MV+PF GTAW+QPPPDLAS+LYKNRIVYLGM VPSVTEL+LAEFLYLQY+D EKP
Sbjct: 79 VVAMVVPFLRGTAWQQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKP 138
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINSTGTTK GEKLGYETEAFAIYD M YVK PIFTLCVGNAWGEAALLL AGAKGN
Sbjct: 139 IYLYINSTGTTKNGEKLGYETEAFAIYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKGN 198
Query: 196 RAALPSSTIMIKQ 208
RAALPSSTIMIKQ
Sbjct: 199 RAALPSSTIMIKQ 211
>gi|226531596|ref|NP_001140352.1| uncharacterized protein LOC100272400 [Zea mays]
gi|194699128|gb|ACF83648.1| unknown [Zea mays]
gi|414876902|tpg|DAA54033.1| TPA: ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 289
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/211 (62%), Positives = 144/211 (68%), Gaps = 12/211 (5%)
Query: 1 MEVATA---SAPIFGLRTRMLATPPRTSPRTVNCNRNLSTSFISPFANGSVSSDFSGLRL 57
ME A A S P L R L +PPR P + + L+ P A F
Sbjct: 1 MEAAAAAFLSPPRVALDVRTLFSPPRCLPVSPSSQLRLAAR---PRALAGAKPRFLSPHR 57
Query: 58 RPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVT 117
P + + V+ MV+PF G AWEQPPPDLAS+LYKNRIVYLGM VPSVT
Sbjct: 58 EP------AVDGGRGARDVVAMVVPFLRGAAWEQPPPDLASFLYKNRIVYLGMCLVPSVT 111
Query: 118 ELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 177
EL+LAEFLYLQY+D EKPIY+YINSTGTTK GEKLGYETEA A+YD M YVK PIFTLCV
Sbjct: 112 ELMLAEFLYLQYDDAEKPIYMYINSTGTTKNGEKLGYETEALAVYDAMRYVKVPIFTLCV 171
Query: 178 GNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
GNAWGEAALLL AGAKGNRAALPSSTIMIKQ
Sbjct: 172 GNAWGEAALLLAAGAKGNRAALPSSTIMIKQ 202
>gi|357130629|ref|XP_003566950.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like isoform 1 [Brachypodium
distachyon]
gi|357130631|ref|XP_003566951.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like isoform 2 [Brachypodium
distachyon]
Length = 293
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 150/210 (71%), Gaps = 5/210 (2%)
Query: 1 MEVATASAP--IFGLRTRMLATPPRTSPRTVNCNRNLSTSFISPFANGSVSSDFSGLRLR 58
ME A A +P + L R L +PP P + + L+ + S SS + R R
Sbjct: 1 MEAAAALSPPRVAALDARALFSPPTALPSSPSSRLRLAARPRA--LAASPSSVVATPRQR 58
Query: 59 PDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTE 118
+PD R V+ MVIPF G A+EQPPPDLAS+LYKNRIVYLGM VPSVTE
Sbjct: 59 FLTPHPDPAAGRGARD-VVAMVIPFLRGHAFEQPPPDLASFLYKNRIVYLGMCLVPSVTE 117
Query: 119 LILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 178
L+LAEFLYLQYED EKPIY+YINSTGTTK GEKLGYETEAFA+YD M YVK PIFTLC+G
Sbjct: 118 LMLAEFLYLQYEDAEKPIYMYINSTGTTKNGEKLGYETEAFAVYDAMRYVKIPIFTLCIG 177
Query: 179 NAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
NAWGEAALLL AGAKGNRAALPSSTIM+KQ
Sbjct: 178 NAWGEAALLLAAGAKGNRAALPSSTIMMKQ 207
>gi|242052591|ref|XP_002455441.1| hypothetical protein SORBIDRAFT_03g010870 [Sorghum bicolor]
gi|241927416|gb|EES00561.1| hypothetical protein SORBIDRAFT_03g010870 [Sorghum bicolor]
Length = 291
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 115/133 (86%), Positives = 121/133 (90%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
V+ MV+PF GTAWEQPPPDLAS+LYKNRIVYLGM VPSVTEL+LAEFLYLQY+D EKP
Sbjct: 72 VVAMVVPFLRGTAWEQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKP 131
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINSTGTTK GEKLGYETEA A+YD M YVK PIFTLCVGNAWGEAALLL AGAKGN
Sbjct: 132 IYLYINSTGTTKNGEKLGYETEALAVYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKGN 191
Query: 196 RAALPSSTIMIKQ 208
RAALPSSTIMIKQ
Sbjct: 192 RAALPSSTIMIKQ 204
>gi|326495296|dbj|BAJ85744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/133 (85%), Positives = 122/133 (91%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
V+ MVIPF GTA+EQPPPDLAS+LYKNRIVYLGM VPSVTEL+LAEFLYLQYED EKP
Sbjct: 64 VVAMVIPFLRGTAFEQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYEDAEKP 123
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IY+YINSTGTTK GEKLGYETEAFA+YD M YVK PIFTLC+GNAWGEAALLL AGAKGN
Sbjct: 124 IYMYINSTGTTKNGEKLGYETEAFAVYDAMRYVKIPIFTLCIGNAWGEAALLLAAGAKGN 183
Query: 196 RAALPSSTIMIKQ 208
RAALPSSTIM+KQ
Sbjct: 184 RAALPSSTIMMKQ 196
>gi|56783783|dbj|BAD81195.1| putative ATP-dependent Clp protease proteolytic subunit [Oryza
sativa Japonica Group]
gi|125569868|gb|EAZ11383.1| hypothetical protein OsJ_01248 [Oryza sativa Japonica Group]
Length = 306
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 92/108 (85%), Positives = 98/108 (90%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
V+ MV+PF GTAW+QPPPDLAS+LYKNRIVYLGM VPSVTEL+LAEFLYLQY+D EKP
Sbjct: 79 VVAMVVPFLRGTAWQQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKP 138
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGE 183
IYLYINSTGTTK GEKLGYETEAFAIYD M YVK PIFTLCVGNAWGE
Sbjct: 139 IYLYINSTGTTKNGEKLGYETEAFAIYDAMRYVKVPIFTLCVGNAWGE 186
>gi|145343664|ref|XP_001416434.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144576659|gb|ABO94727.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 251
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/132 (68%), Positives = 109/132 (82%)
Query: 77 ITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
IT VIP G A Q PPDL S+++K RIVYLGM+ VPSVTELILAE LYLQYED +KPI
Sbjct: 52 ITQVIPSLQGDASTQSPPDLPSFIFKERIVYLGMTLVPSVTELILAELLYLQYEDKKKPI 111
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
LYINSTG++K G+K GY+TEAFAIYD + YV PP+ T+ VG AWGEAA+LL AG++GNR
Sbjct: 112 QLYINSTGSSKDGQKYGYDTEAFAIYDTIQYVSPPVHTIAVGTAWGEAAMLLAAGSRGNR 171
Query: 197 AALPSSTIMIKQ 208
AALPS++IM+KQ
Sbjct: 172 AALPSASIMLKQ 183
>gi|412990157|emb|CCO19475.1| ATP-dependent Clp protease-like protein [Bathycoccus prasinos]
Length = 236
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/147 (65%), Positives = 114/147 (77%), Gaps = 4/147 (2%)
Query: 66 SFCKSKPRSP----VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELIL 121
S +SK + P I VIP G A Q PPDL SY++K RIVYLGM+ VPSVTELIL
Sbjct: 23 SAARSKVKCPRICHEIKAVIPSLQGDASSQLPPDLPSYIFKERIVYLGMTLVPSVTELIL 82
Query: 122 AEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAW 181
AE LYLQYED KPI+LYINSTGT+K G+K GY++EAFAIYD + YVKPP+ T+ +G AW
Sbjct: 83 AELLYLQYEDNNKPIHLYINSTGTSKEGQKYGYDSEAFAIYDTIQYVKPPVHTIAIGTAW 142
Query: 182 GEAALLLGAGAKGNRAALPSSTIMIKQ 208
GEAA+LL AG KG+RAALPS++IMIKQ
Sbjct: 143 GEAAMLLSAGKKGHRAALPSASIMIKQ 169
>gi|255071097|ref|XP_002507630.1| predicted protein [Micromonas sp. RCC299]
gi|226522905|gb|ACO68888.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 289
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/135 (68%), Positives = 108/135 (80%)
Query: 77 ITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
I+ VIP G A Q PPDL S+++K RIVYLGM+ VPSVTELILAE LYLQYED KPI
Sbjct: 22 ISAVIPSLQGDASTQAPPDLPSFIFKERIVYLGMTLVPSVTELILAELLYLQYEDKTKPI 81
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
YLYINSTGT+K G+K GY+TEAFAIYD + YV P+ T+ VG AWGEAA+LL +G KGNR
Sbjct: 82 YLYINSTGTSKEGQKYGYDTEAFAIYDTIKYVNSPVHTVAVGTAWGEAAMLLASGEKGNR 141
Query: 197 AALPSSTIMIKQAGD 211
AALPS++IMIKQ D
Sbjct: 142 AALPSASIMIKQPID 156
>gi|308799978|ref|XP_003074770.1| ClpP3 ATP-dependent Clp protease proteolytic subunit ClpR, putat
(IC) [Ostreococcus tauri]
gi|119358788|emb|CAL52028.2| ClpP3 ATP-dependent Clp protease proteolytic subunit ClpR, putat
(IC), partial [Ostreococcus tauri]
Length = 244
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 113/140 (80%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
++ PR+ +I VIP G A Q PPDL S++++ RIVYLGM+ VPSVTELILAE LYLQ
Sbjct: 39 RNAPRTRIIRAVIPSLQGDAATQSPPDLPSFIFQERIVYLGMTLVPSVTELILAELLYLQ 98
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
YED +KPI LYINSTG++K G+K GY++EAFAIYD + YV PP+ T+ VG AWGEAA+LL
Sbjct: 99 YEDKKKPIQLYINSTGSSKDGKKYGYDSEAFAIYDTIQYVSPPVHTIAVGTAWGEAAMLL 158
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
+G+KG RAALPS++IM+KQ
Sbjct: 159 ASGSKGQRAALPSASIMLKQ 178
>gi|125525351|gb|EAY73465.1| hypothetical protein OsI_01344 [Oryza sativa Indica Group]
Length = 284
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 114/164 (69%), Gaps = 7/164 (4%)
Query: 20 TPPRTSPRTVNCNRNLSTSFISPFANGSVSSDFSGLRLRPDCLNPDSFCKSKPRSPVITM 79
+PPR SP + +T SP + + S S L P +P + ++
Sbjct: 8 SPPRVSP---DARAMFATLPASPSPHLTHSHSHSTHALSPASQHPTTAGGGGHQA----A 60
Query: 80 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
V+PF S TA QPPPDLAS+LYK RIVYLGM +PSVTEL+LAEFLYLQY+D EKPIYLY
Sbjct: 61 VVPFLSVTACHQPPPDLASFLYKYRIVYLGMCLLPSVTELMLAEFLYLQYDDAEKPIYLY 120
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGE 183
INSTGTTK GEKLGYETEAFAIYD M YVK PIFTLCVGNAWGE
Sbjct: 121 INSTGTTKNGEKLGYETEAFAIYDAMRYVKVPIFTLCVGNAWGE 164
>gi|302801676|ref|XP_002982594.1| hypothetical protein SELMODRAFT_116719 [Selaginella moellendorffii]
gi|302823376|ref|XP_002993341.1| hypothetical protein SELMODRAFT_136938 [Selaginella moellendorffii]
gi|300138850|gb|EFJ05603.1| hypothetical protein SELMODRAFT_136938 [Selaginella moellendorffii]
gi|300149693|gb|EFJ16347.1| hypothetical protein SELMODRAFT_116719 [Selaginella moellendorffii]
Length = 218
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 114/129 (88%)
Query: 80 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
VIPF G A QPPPDL SYL+ NRIV+LGMS VP+VTELI+AEFLYLQ+ D EKPIY+Y
Sbjct: 2 VIPFVRGDASAQPPPDLPSYLFHNRIVFLGMSLVPAVTELIMAEFLYLQFVDPEKPIYMY 61
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INSTGTTK GEKLGYETEA A+YD M YVKPPIFTLCVGNAWGEAALLL AGAKGNR+AL
Sbjct: 62 INSTGTTKDGEKLGYETEALAMYDTMQYVKPPIFTLCVGNAWGEAALLLAAGAKGNRSAL 121
Query: 200 PSSTIMIKQ 208
PS+TIM+K+
Sbjct: 122 PSTTIMLKE 130
>gi|307109710|gb|EFN57947.1| hypothetical protein CHLNCDRAFT_11056, partial [Chlorella
variabilis]
Length = 200
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 107/129 (82%)
Query: 80 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
VIP +G A +Q PPDL SYL+K RIVY+GMS VP+VTEL+LAE LYLQY++ +PIY+Y
Sbjct: 2 VIPALAGDATDQTPPDLPSYLFKERIVYVGMSLVPAVTELVLAEMLYLQYDNPTRPIYMY 61
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INSTG KG KLGYE+EAFAIYD M Y+KPP+ T+CVG+A+GEAA+LL AG G RAAL
Sbjct: 62 INSTGVIKGSGKLGYESEAFAIYDTMRYIKPPVATVCVGSAFGEAAMLLAAGEAGRRAAL 121
Query: 200 PSSTIMIKQ 208
PS++IMI+Q
Sbjct: 122 PSTSIMIRQ 130
>gi|384252076|gb|EIE25553.1| hypothetical protein COCSUDRAFT_46762 [Coccomyxa subellipsoidea
C-169]
Length = 216
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/128 (67%), Positives = 104/128 (81%)
Query: 81 IPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYI 140
+P G A EQ PPDL SYL+K RIVYLGMS VP+VTEL+LAE LYLQY++ +PI++YI
Sbjct: 1 MPQLQGDATEQTPPDLPSYLFKERIVYLGMSLVPAVTELLLAELLYLQYDNPTRPIFMYI 60
Query: 141 NSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALP 200
NS G KGG+KLGYE+EAFAIYD M Y+KP + TLCVGNA+GE+A+LL AG G R ALP
Sbjct: 61 NSAGVQKGGDKLGYESEAFAIYDTMKYIKPEVHTLCVGNAFGESAMLLAAGTPGKRGALP 120
Query: 201 SSTIMIKQ 208
SSTIM++Q
Sbjct: 121 SSTIMLRQ 128
>gi|119512062|ref|ZP_01631156.1| ATP-dependent Clp protease proteolytic subunit [Nodularia spumigena
CCY9414]
gi|119463288|gb|EAW44231.1| ATP-dependent Clp protease proteolytic subunit [Nodularia spumigena
CCY9414]
Length = 220
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ + + PPPDL S L K RIVYLGM VP+VTELI+AE LYLQ +D E
Sbjct: 4 SPIKAVQAPYQGDSFYRTPPPDLPSLLMKERIVYLGMPLVPAVTELIIAELLYLQSDDPE 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAIYD M Y+KPPI T+C+G+A G AA+LL AG
Sbjct: 64 KPIKIYINSTGTSGYSGEPIGFETEAFAIYDTMKYIKPPIHTICIGSAMGMAAMLLSAGT 123
Query: 193 KGNRAALPSSTIMIKQ 208
KG RA+LP S+I++ Q
Sbjct: 124 KGCRASLPHSSIILHQ 139
>gi|428217036|ref|YP_007101501.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena sp.
PCC 7367]
gi|427988818|gb|AFY69073.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena sp.
PCC 7367]
Length = 218
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 98/127 (77%), Gaps = 1/127 (0%)
Query: 83 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINS 142
+ A+ PPPDL S L K RIVY+GM V SVTELI+AE LYLQYED EKPIY+YINS
Sbjct: 12 YYGDAAFRSPPPDLQSLLLKERIVYIGMPLVASVTELIVAELLYLQYEDTEKPIYIYINS 71
Query: 143 TGTTKG-GEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPS 201
TGT +G GE +G+ETEAFAI D + Y+KPP+ T+C+G A G AA+LL +G KG RA+LP+
Sbjct: 72 TGTDRGDGEPVGFETEAFAICDTLKYIKPPVHTICIGTAAGSAAMLLSSGTKGCRASLPN 131
Query: 202 STIMIKQ 208
+ I+++Q
Sbjct: 132 ANIVLRQ 138
>gi|428305262|ref|YP_007142087.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
gi|428246797|gb|AFZ12577.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
Length = 219
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P+ + P+ + PPPDL S L K RIVYLGM VPSVTELI+AE LYLQYED EK
Sbjct: 4 PIQAVQSPYYGDNFYRTPPPDLPSMLLKERIVYLGMPLVPSVTELIVAELLYLQYEDPEK 63
Query: 135 PIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
PI +YINSTGT+ GE +G+ETEAFAI D M Y+KPPI T+C+G+A G AA+LL AG K
Sbjct: 64 PIKIYINSTGTSNYNGEPIGFETEAFAICDTMSYIKPPIHTICIGSAMGMAAMLLSAGTK 123
Query: 194 GNRAALPSSTIMIKQ 208
G R +LP++ I++ Q
Sbjct: 124 GCRVSLPNANIVLHQ 138
>gi|428299970|ref|YP_007138276.1| ATP-dependent Clp protease proteolytic subunit [Calothrix sp. PCC
6303]
gi|428236514|gb|AFZ02304.1| ATP-dependent Clp protease proteolytic subunit [Calothrix sp. PCC
6303]
Length = 220
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 103/136 (75%), Gaps = 1/136 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + ++ ++ PPPDL S L K RIVYLG+ VP+VTELI+A+ LYLQ +D E
Sbjct: 4 SPIKAVQAAYSGENSYRTPPPDLESLLLKERIVYLGLPLVPAVTELIVAQLLYLQSDDPE 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ G+ +G+ETEAFAIYD M Y+KPPI T+C+G+A G AA+LL AG
Sbjct: 64 KPIKIYINSTGTSGYTGDPVGFETEAFAIYDTMKYIKPPIHTICMGSAMGMAAMLLAAGT 123
Query: 193 KGNRAALPSSTIMIKQ 208
KG RA+LP+++I++ Q
Sbjct: 124 KGCRASLPNASIVLHQ 139
>gi|452825129|gb|EME32127.1| ATP-dependent Clp protease, protease subunit isoform 1 [Galdieria
sulphuraria]
gi|452825130|gb|EME32128.1| ATP-dependent Clp protease, protease subunit isoform 2 [Galdieria
sulphuraria]
Length = 275
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
NRI+YLGM +P+VTELI+AEFLYLQYE EKPIYLYINSTGT+ G G+ETEAFA
Sbjct: 84 HNRIIYLGMPLLPAVTELIIAEFLYLQYESGEKPIYLYINSTGTSNPDGSTAGFETEAFA 143
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ D M YVKPP+ T+CVG A+G AALLL AG KG RAALP +T+M+ Q
Sbjct: 144 VCDTMRYVKPPVHTICVGQAYGTAALLLAAGEKGFRAALPHATVMLHQ 191
>gi|162606046|ref|XP_001713538.1| ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
gi|13794458|gb|AAK39833.1|AF165818_41 ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
Length = 254
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
NRIVYLGM VP+VTELI+AEFLYLQYE+ EKP+Y+Y+NSTGT+ G G+ETEAFA
Sbjct: 66 HNRIVYLGMPLVPAVTELIVAEFLYLQYENSEKPVYMYLNSTGTSNPDGSSAGFETEAFA 125
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I D M Y+KPP+ T+CVG A+G A+LL +G G RAALP++TIMI Q
Sbjct: 126 IADTMNYIKPPVHTICVGQAFGTCAMLLSSGEPGQRAALPNATIMIHQ 173
>gi|330038335|ref|XP_003239570.1| ATP-dependent Clp protease proteolytic subunit [Cryptomonas
paramecium]
gi|327206494|gb|AEA38672.1| ATP-dependent Clp protease proteolytic subunit [Cryptomonas
paramecium]
Length = 243
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/117 (60%), Positives = 90/117 (76%), Gaps = 1/117 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEK 151
PPDL S L NRIVYLGM VP+VTELI+AEFL+LQYE+ EKP+++Y+NSTGT+ G
Sbjct: 49 PPDLPSLLLHNRIVYLGMPLVPAVTELIVAEFLFLQYENSEKPLFMYLNSTGTSNPDGSS 108
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
G+ETEAFAI D M Y+KP + T+CVG A+G +A+LL G R+ALP++TIMI Q
Sbjct: 109 AGFETEAFAIADTMNYIKPSVHTICVGQAFGTSAMLLSNGEVNCRSALPNATIMIHQ 165
>gi|399949581|gb|AFP65239.1| ATP-dependent Clp protease proteolytic subunit [Chroomonas
mesostigmatica CCMP1168]
Length = 264
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Query: 103 NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAI 161
NRIVYLGM VP+VTELI+AEFLYLQYE+ EKPI++Y+NSTGT+ G G+ETEAFAI
Sbjct: 75 NRIVYLGMPLVPAVTELIVAEFLYLQYENAEKPIFMYLNSTGTSNPDGSSAGFETEAFAI 134
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D M Y+KPP+ T+CVG A G A+LL +G G R+ALP++TIM+ Q
Sbjct: 135 ADTMNYIKPPVHTICVGQALGTCAMLLSSGEPGQRSALPNATIMVHQ 181
>gi|220906938|ref|YP_002482249.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 7425]
gi|219863549|gb|ACL43888.1| Endopeptidase Clp [Cyanothece sp. PCC 7425]
Length = 218
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 103/137 (75%), Gaps = 1/137 (0%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
RSP+ + P+ + PPPDL S L K RIVYLGM VP+VTELI+AE L+LQY+D
Sbjct: 2 RSPIQAVQSPYYGDAFYRTPPPDLPSLLLKERIVYLGMPLVPAVTELIIAELLFLQYDDP 61
Query: 133 EKPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EKPI +YINSTGT++ GE +G+ETEAFAI D M Y+KPPI T+C+G A G AA+LL AG
Sbjct: 62 EKPIKIYINSTGTSRYDGEPIGFETEAFAICDTMRYIKPPIHTICIGQAMGMAAMLLSAG 121
Query: 192 AKGNRAALPSSTIMIKQ 208
KG RA+LP++TI++ Q
Sbjct: 122 TKGCRASLPNATIVLHQ 138
>gi|428202894|ref|YP_007081483.1| protease subunit of ATP-dependent protease [Pleurocapsa sp. PCC
7327]
gi|427980326|gb|AFY77926.1| protease subunit of ATP-dependent protease [Pleurocapsa sp. PCC
7327]
Length = 228
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 96/138 (69%), Gaps = 11/138 (7%)
Query: 83 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDV 132
+ S ++ PPPDL S L K RIVYLGM S VT+LI+A+ L+LQ++D
Sbjct: 12 YYSDVSYRTPPPDLESLLLKERIVYLGMPLFSSDDVKQQVGIDVTQLIIAQLLFLQFDDA 71
Query: 133 EKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EKPIY YINSTGT+ G+ +GYETEAFAI D + Y+KPP+ T+C+G A G AA++L AG
Sbjct: 72 EKPIYFYINSTGTSWYTGDAIGYETEAFAICDTIAYIKPPVHTICIGQAMGTAAMILSAG 131
Query: 192 AKGNRAALPSSTIMIKQA 209
KG RA+LP +TI++ Q+
Sbjct: 132 TKGCRASLPHATIVLNQS 149
>gi|160331817|ref|XP_001712615.1| clpP1 [Hemiselmis andersenii]
gi|159766064|gb|ABW98290.1| clpP1 [Hemiselmis andersenii]
Length = 257
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/108 (62%), Positives = 85/108 (78%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
NRIVYLGM VP+VTELI+AEFLYLQYE+ +KP+++Y+NSTGT+ G G+ETEAFA
Sbjct: 67 HNRIVYLGMPLVPAVTELIVAEFLYLQYENADKPVFMYLNSTGTSNPDGSSAGFETEAFA 126
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I D M Y+KPP+ T+CVG A G A+LL +G G RAALP+STIM+ Q
Sbjct: 127 IADTMNYIKPPVHTICVGQALGTCAMLLSSGEPGQRAALPNSTIMVHQ 174
>gi|323455402|gb|EGB11270.1| hypothetical protein AURANDRAFT_21676 [Aureococcus anophagefferens]
Length = 221
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/118 (61%), Positives = 87/118 (73%), Gaps = 1/118 (0%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GE 150
PPPDLAS L NRIVYLGM V +VTELI+AE LYL YE KP+ LYINS GT G+
Sbjct: 18 PPPDLASLLLHNRIVYLGMPMVSAVTELIVAELLYLNYESPTKPVTLYINSPGTVNSQGQ 77
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D M Y+KPP+ T+CVG A+G AA+LL G KG R LP+++IM+ Q
Sbjct: 78 SVGFETEAFAIADCMKYIKPPVQTICVGQAFGAAAMLLAQGEKGKRFCLPNASIMLHQ 135
>gi|427736766|ref|YP_007056310.1| protease subunit of ATP-dependent protease [Rivularia sp. PCC 7116]
gi|427371807|gb|AFY55763.1| protease subunit of ATP-dependent protease [Rivularia sp. PCC 7116]
Length = 221
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 98/136 (72%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
SP+ M P+T + PPPDL S L K RIVYLG VP VT+LI+AE LYLQ ED
Sbjct: 3 HSPIKAMQAPYTGDNFYRTPPPDLPSLLLKERIVYLGAPLVPEVTKLIIAELLYLQSEDP 62
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
+KPI +YINS GT+ G + + +ETEAFAIYD M Y+KPPI T+C+G A G AA+LL AG
Sbjct: 63 DKPIKIYINSVGTSFGDQPIAFETEAFAIYDTMRYIKPPIHTICIGQAMGMAAMLLSAGT 122
Query: 193 KGNRAALPSSTIMIKQ 208
KG RAALP ++I++KQ
Sbjct: 123 KGCRAALPHASIVLKQ 138
>gi|22299302|ref|NP_682549.1| ATP-dependent Clp protease-like protein [Thermosynechococcus
elongatus BP-1]
gi|22295485|dbj|BAC09311.1| ATP-dependent Clp protease proteolytic subunit 3
[Thermosynechococcus elongatus BP-1]
Length = 218
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 87/108 (80%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
K RIVYLGM VP+VTELI+AE LYLQY+D EKPI +YINSTGT++ GE +G+ETEAFA
Sbjct: 31 KERIVYLGMPLVPAVTELIIAELLYLQYDDPEKPIRIYINSTGTSRYDGEPVGFETEAFA 90
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I D M Y+KPP+ T+C+G A G AA+LL AG KG RA+LP +TI++ Q
Sbjct: 91 ICDTMRYIKPPVHTICIGQAMGMAAMLLSAGTKGCRASLPHATIVLHQ 138
>gi|414079204|ref|YP_007000628.1| peptidase family S14 ClpP [Anabaena sp. 90]
gi|413972483|gb|AFW96571.1| peptidase family S14 ClpP [Anabaena sp. 90]
Length = 220
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 101/128 (78%), Gaps = 1/128 (0%)
Query: 82 PFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYIN 141
P++ +++ PPPDL S L K RIVYLGM VPSVTELI+A+ LYLQ +D EKPI +YIN
Sbjct: 12 PYSGDSSYRTPPPDLPSLLLKERIVYLGMPLVPSVTELIVAQLLYLQSDDPEKPIKIYIN 71
Query: 142 STGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALP 200
STGT+ GE +G+ETEAFAIYD M Y+KPPI T+C+G+A G AA++L AG KG RA+LP
Sbjct: 72 STGTSGYSGEPIGFETEAFAIYDTMKYIKPPIHTICIGSAMGMAAMILSAGTKGCRASLP 131
Query: 201 SSTIMIKQ 208
+S+I++ Q
Sbjct: 132 NSSIILHQ 139
>gi|17231850|ref|NP_488398.1| ATP-dependent Clp protease-like protein [Nostoc sp. PCC 7120]
gi|17133494|dbj|BAB76057.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
Length = 220
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 104/136 (76%), Gaps = 1/136 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ +++ PPPDL S L K RIVYLGM VP+VTELI+A+ LYLQ +D +
Sbjct: 4 SPIKAVQAPYYGDSSYRTPPPDLPSLLLKERIVYLGMPLVPAVTELIVAQLLYLQSDDPD 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAIYD M Y+KPPI T+C+G+A G AA+LL AG
Sbjct: 64 KPIKIYINSTGTSGYSGEPIGFETEAFAIYDTMKYIKPPIHTICIGSAMGMAAMLLSAGT 123
Query: 193 KGNRAALPSSTIMIKQ 208
KG RA+LPSS+I++ Q
Sbjct: 124 KGCRASLPSSSIILHQ 139
>gi|119493581|ref|ZP_01624245.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119452571|gb|EAW33754.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 220
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 98/142 (69%), Gaps = 11/142 (7%)
Query: 79 MVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQ 128
M P+ + + PPPDL S L K RIVYLG+ S VTELI+A+ LYLQ
Sbjct: 1 MQSPYYNDSPVRTPPPDLESLLLKERIVYLGLPLYSSDDIKRQVGIDVTELIIAQLLYLQ 60
Query: 129 YEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALL 187
++D +KPIY YINSTGT+ GG+ +G+ETEAFAI D + Y+KPP+ T+C+G A G AA++
Sbjct: 61 FDDPDKPIYFYINSTGTSWYGGDAIGFETEAFAICDTISYIKPPVHTICIGQAMGTAAMI 120
Query: 188 LGAGAKGNRAALPSSTIMIKQA 209
L AG KG RA+LP +T+++ QA
Sbjct: 121 LSAGTKGYRASLPHATLILNQA 142
>gi|414876901|tpg|DAA54032.1| TPA: hypothetical protein ZEAMMB73_875629 [Zea mays]
Length = 186
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 90/99 (90%)
Query: 110 MSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVK 169
M VPSVTEL+LAEFLYLQY+D EKPIY+YINSTGTTK GEKLGYETEA A+YD M YVK
Sbjct: 1 MCLVPSVTELMLAEFLYLQYDDAEKPIYMYINSTGTTKNGEKLGYETEALAVYDAMRYVK 60
Query: 170 PPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
PIFTLCVGNAWGEAALLL AGAKGNRAALPSSTIMIKQ
Sbjct: 61 VPIFTLCVGNAWGEAALLLAAGAKGNRAALPSSTIMIKQ 99
>gi|88770682|gb|ABD51944.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodomonas
salina]
Length = 262
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Query: 103 NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAI 161
NRIVYLGM VP+VTELI+AEFLYLQYE+ EKP+++Y+NSTGT+ G G+ETEAFAI
Sbjct: 73 NRIVYLGMPLVPAVTELIVAEFLYLQYENSEKPVFMYLNSTGTSNPDGSSAGFETEAFAI 132
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D M YVKPP+ T+CVG A+G +LL +G +RAALP++TIMI Q
Sbjct: 133 ADTMNYVKPPVHTICVGQAFGTCVMLLSSGEPTHRAALPNATIMIHQ 179
>gi|218245804|ref|YP_002371175.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 8801]
gi|257058850|ref|YP_003136738.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 8802]
gi|16506759|gb|AAL23932.1|AF423176_1 hypothetical protein [Cyanothece sp. PCC 8801]
gi|218166282|gb|ACK65019.1| Endopeptidase Clp [Cyanothece sp. PCC 8801]
gi|256589016|gb|ACU99902.1| Endopeptidase Clp [Cyanothece sp. PCC 8802]
Length = 226
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 95/137 (69%), Gaps = 11/137 (8%)
Query: 83 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDV 132
+ T++ PPPDL S + K RI+YLGM S VT+LI+A+ LYLQ++D
Sbjct: 10 YYGDTSFRTPPPDLESLMLKERIIYLGMPLFSSDDVKQQVGIDVTQLIIAQLLYLQFDDP 69
Query: 133 EKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
+KPIY YINSTGT+ G+ +G+ETEAFAI D M YVKPPI T+C+G A G AA++L AG
Sbjct: 70 DKPIYFYINSTGTSWYTGDAIGFETEAFAICDTMNYVKPPIHTICIGQAMGTAAMILSAG 129
Query: 192 AKGNRAALPSSTIMIKQ 208
KG RA+LP +TI++ Q
Sbjct: 130 TKGCRASLPHATIVLNQ 146
>gi|428224314|ref|YP_007108411.1| endopeptidase Clp [Geitlerinema sp. PCC 7407]
gi|427984215|gb|AFY65359.1| Endopeptidase Clp [Geitlerinema sp. PCC 7407]
Length = 237
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 87/108 (80%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
K RIVYLGM VP+VTELI+AE LYLQYED EKPI +YINSTGT+ GE +G+ETEAFA
Sbjct: 49 KERIVYLGMPLVPAVTELIIAELLYLQYEDPEKPIRIYINSTGTSSYSGEPVGFETEAFA 108
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I D + Y+KPPI T+C+G+A G AA+LL AG KG RA+LP ++I++ Q
Sbjct: 109 ICDTISYIKPPIHTICIGSAMGMAAMLLSAGTKGCRASLPHASIVLHQ 156
>gi|434402515|ref|YP_007145400.1| protease subunit of ATP-dependent protease [Cylindrospermum
stagnale PCC 7417]
gi|428256770|gb|AFZ22720.1| protease subunit of ATP-dependent protease [Cylindrospermum
stagnale PCC 7417]
Length = 220
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ + PPPDL S L K RIVYLGM VP+VTELI+AE LYLQ +D E
Sbjct: 4 SPIKAVQAPYYGDNFYRTPPPDLPSLLLKERIVYLGMPLVPAVTELIVAELLYLQSDDPE 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAI+D M Y+KPPI T+CVG+A G AA+LL AG
Sbjct: 64 KPIKIYINSTGTSGYSGEPIGFETEAFAIFDTMKYIKPPIHTICVGSAMGMAAMLLSAGT 123
Query: 193 KGNRAALPSSTIMIKQ 208
KG RA+LP+S+I++ Q
Sbjct: 124 KGCRASLPNSSIILHQ 139
>gi|166368460|ref|YP_001660733.1| ATP-dependent Clp protease-like protein [Microcystis aeruginosa
NIES-843]
gi|390438072|ref|ZP_10226570.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis sp. T1-4]
gi|422301332|ref|ZP_16388700.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9806]
gi|425442639|ref|ZP_18822880.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9717]
gi|425447771|ref|ZP_18827753.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9443]
gi|425455949|ref|ZP_18835660.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9807]
gi|425462516|ref|ZP_18841990.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9808]
gi|425465072|ref|ZP_18844382.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9809]
gi|443664108|ref|ZP_21133358.1| clp protease family protein [Microcystis aeruginosa DIANCHI905]
gi|159028169|emb|CAO89776.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|166090833|dbj|BAG05541.1| ATP-dependent Clp protease proteolytic subunit [Microcystis
aeruginosa NIES-843]
gi|389716258|emb|CCH99491.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9717]
gi|389731600|emb|CCI04365.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9443]
gi|389792300|emb|CCI11971.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9806]
gi|389803099|emb|CCI17965.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9807]
gi|389824417|emb|CCI26623.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9808]
gi|389832762|emb|CCI23366.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9809]
gi|389838472|emb|CCI30694.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis sp. T1-4]
gi|443331651|gb|ELS46297.1| clp protease family protein [Microcystis aeruginosa DIANCHI905]
Length = 228
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 94/137 (68%), Gaps = 11/137 (8%)
Query: 83 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDV 132
+ A+ PPPDL S L K RIVYLG+ S VTELI+A+ LYLQ++D
Sbjct: 12 YYGDAAYRTPPPDLESLLLKERIVYLGLPLFSSDDVKRNVGVDVTELIIAQLLYLQFDDP 71
Query: 133 EKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EKPI+ YINSTGT+ G+ +GYETEAFAI D + Y+KPP+ T+C+G A G AA++L AG
Sbjct: 72 EKPIFFYINSTGTSWYTGDAIGYETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSAG 131
Query: 192 AKGNRAALPSSTIMIKQ 208
KG RA+LP +TI++ Q
Sbjct: 132 TKGFRASLPHATIVLNQ 148
>gi|425470395|ref|ZP_18849265.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9701]
gi|389883996|emb|CCI35667.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9701]
Length = 228
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 94/137 (68%), Gaps = 11/137 (8%)
Query: 83 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDV 132
+ A+ PPPDL S L K RIVYLG+ S VTELI+A+ LYLQ++D
Sbjct: 12 YYGDAAYRTPPPDLESLLLKERIVYLGLPLFSSDDVKRNVGVDVTELIIAQLLYLQFDDP 71
Query: 133 EKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EKPI+ YINSTGT+ G+ +GYETEAFAI D + Y+KPP+ T+C+G A G AA++L AG
Sbjct: 72 EKPIFFYINSTGTSWYTGDAIGYETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSAG 131
Query: 192 AKGNRAALPSSTIMIKQ 208
KG RA+LP +TI++ Q
Sbjct: 132 TKGFRASLPHATIVLNQ 148
>gi|425436519|ref|ZP_18816954.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9432]
gi|425450003|ref|ZP_18829835.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 7941]
gi|440752717|ref|ZP_20931920.1| clp protease family protein [Microcystis aeruginosa TAIHU98]
gi|389678720|emb|CCH92423.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9432]
gi|389769364|emb|CCI05783.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 7941]
gi|440177210|gb|ELP56483.1| clp protease family protein [Microcystis aeruginosa TAIHU98]
Length = 228
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 94/137 (68%), Gaps = 11/137 (8%)
Query: 83 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDV 132
+ A+ PPPDL S L K RIVYLG+ S VTELI+A+ LYLQ++D
Sbjct: 12 YYGDAAYRTPPPDLESLLLKERIVYLGLPLFSSDDVKRNIGVDVTELIIAQLLYLQFDDP 71
Query: 133 EKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EKPI+ YINSTGT+ G+ +GYETEAFAI D + Y+KPP+ T+C+G A G AA++L AG
Sbjct: 72 EKPIFFYINSTGTSWYTGDAIGYETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSAG 131
Query: 192 AKGNRAALPSSTIMIKQ 208
KG RA+LP +TI++ Q
Sbjct: 132 TKGFRASLPHATIVLNQ 148
>gi|440684796|ref|YP_007159591.1| ATP-dependent Clp protease proteolytic subunit [Anabaena cylindrica
PCC 7122]
gi|428681915|gb|AFZ60681.1| ATP-dependent Clp protease proteolytic subunit [Anabaena cylindrica
PCC 7122]
Length = 220
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ + PPPDL S L K RIVYLGM VP+VTELI+A+ LYLQ +D E
Sbjct: 4 SPIKAVQAPYYGDNFYRTPPPDLPSLLLKERIVYLGMPLVPAVTELIVAQLLYLQSDDPE 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAIYD M Y+KPPI T+C+G+A G AA+LL AG
Sbjct: 64 KPIKIYINSTGTSGYSGEPIGFETEAFAIYDTMKYIKPPIHTICIGSAMGMAAMLLSAGT 123
Query: 193 KGNRAALPSSTIMIKQ 208
KG RA+LP+S I++ Q
Sbjct: 124 KGCRASLPNSNIILHQ 139
>gi|186681466|ref|YP_001864662.1| ATP-dependent Clp protease-like protein [Nostoc punctiforme PCC
73102]
gi|186463918|gb|ACC79719.1| peptidase S14, ClpP [Nostoc punctiforme PCC 73102]
Length = 220
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 103/136 (75%), Gaps = 1/136 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ +++ PPPDL S L K RIVY+GM VP+VTELI+AE L+LQ +D E
Sbjct: 4 SPIKAVQAPYYGDSSYRTPPPDLPSLLLKERIVYIGMPLVPAVTELIVAELLFLQSDDPE 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAIYD M Y+KPPI T+CVG+A G +A+LL AG
Sbjct: 64 KPIKIYINSTGTSGYSGEPIGFETEAFAIYDTMRYIKPPIHTICVGSAMGMSAMLLSAGT 123
Query: 193 KGNRAALPSSTIMIKQ 208
KG RA+LP S+I++ Q
Sbjct: 124 KGCRASLPHSSIILHQ 139
>gi|254421954|ref|ZP_05035672.1| Clp protease [Synechococcus sp. PCC 7335]
gi|196189443|gb|EDX84407.1| Clp protease [Synechococcus sp. PCC 7335]
Length = 230
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 102/147 (69%), Gaps = 12/147 (8%)
Query: 74 SPVITMVIPFTSGTA-WEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILA 122
S + + P+ G+A + PPPDL S L K RIVYLG V S VT+LI+A
Sbjct: 3 SSIKAVQAPYGGGSAAYRTPPPDLQSLLLKERIVYLGTPLVSSDDFKRQMGVDVTKLIIA 62
Query: 123 EFLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAW 181
+ LYL+++D EKPIY YINSTGT+ G+ +G+ETEAFAI D + Y+KPP+ T+C+G A
Sbjct: 63 QLLYLEFDDPEKPIYFYINSTGTSWYTGDAVGFETEAFAICDTLKYIKPPVHTICLGQAM 122
Query: 182 GEAALLLGAGAKGNRAALPSSTIMIKQ 208
G AA++L +GAKG+RA+LP +TI++ Q
Sbjct: 123 GTAAMILSSGAKGSRASLPHATIVLNQ 149
>gi|75907529|ref|YP_321825.1| ATP-dependent Clp protease-like protein [Anabaena variabilis ATCC
29413]
gi|75701254|gb|ABA20930.1| Peptidase S14, ClpP [Anabaena variabilis ATCC 29413]
Length = 220
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/136 (57%), Positives = 103/136 (75%), Gaps = 1/136 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ ++ PPPDL S L K RIVYLGM VP+VTELI+A+ LYLQ +D +
Sbjct: 4 SPIKAVQAPYYGDNSYRTPPPDLPSLLLKERIVYLGMPLVPAVTELIVAQLLYLQSDDPD 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAIYD M Y+KPPI T+C+G+A G AA+LL AG
Sbjct: 64 KPIKIYINSTGTSGYSGEPIGFETEAFAIYDTMKYIKPPIHTICIGSAMGMAAMLLSAGT 123
Query: 193 KGNRAALPSSTIMIKQ 208
KG RA+LP+++I++ Q
Sbjct: 124 KGCRASLPNASIILHQ 139
>gi|113475005|ref|YP_721066.1| ATP-dependent Clp protease-like protein [Trichodesmium erythraeum
IMS101]
gi|110166053|gb|ABG50593.1| Endopeptidase Clp [Trichodesmium erythraeum IMS101]
Length = 229
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 95/138 (68%), Gaps = 11/138 (7%)
Query: 83 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDV 132
+ ++ PPPDL S + K RIVYLG+ S VT+LI+A+ LYLQ+++
Sbjct: 13 YYGDVSFRTPPPDLESLMLKERIVYLGLPLFSSDEVKRNVGIDVTQLIIAQLLYLQFDNP 72
Query: 133 EKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EKPIY YINSTGT+ G+ +G+ETEAFAI D M YVKPPI T+C+G A G AA++L AG
Sbjct: 73 EKPIYFYINSTGTSWYTGDAIGFETEAFAICDTMSYVKPPIHTICIGQAMGTAAMILSAG 132
Query: 192 AKGNRAALPSSTIMIKQA 209
KG RA+LP +TI++ QA
Sbjct: 133 TKGYRASLPHATIVLNQA 150
>gi|300869049|ref|ZP_07113651.1| ATP-dependent Clp protease-like protein [Oscillatoria sp. PCC 6506]
gi|300332960|emb|CBN58845.1| ATP-dependent Clp protease-like protein [Oscillatoria sp. PCC 6506]
Length = 222
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 93/137 (67%), Gaps = 12/137 (8%)
Query: 89 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYL 138
+ PPPDL S L K RIVYLGM S VTELI+A+ LYLQ++D EKPIY
Sbjct: 11 YRTPPPDLESLLLKERIVYLGMPLFSSDEIKRNVGIDVTELIIAQLLYLQFDDPEKPIYF 70
Query: 139 YINSTGTTKGGE--KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
YINS+GT+ G E +G ETEAFAI D M Y+KPP+ T+C+G A G AA++L AG KG R
Sbjct: 71 YINSSGTSWGDEGYAIGLETEAFAICDTMSYIKPPVHTICIGQAMGTAAMILSAGTKGFR 130
Query: 197 AALPSSTIMIKQAGDTG 213
A+LP +TI++ Q+ G
Sbjct: 131 ASLPHATIVLNQSKTGG 147
>gi|427730533|ref|YP_007076770.1| protease subunit of ATP-dependent protease [Nostoc sp. PCC 7524]
gi|427366452|gb|AFY49173.1| protease subunit of ATP-dependent protease [Nostoc sp. PCC 7524]
Length = 220
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ + PPPDL S L K RIVYLGM VP+VTELI+A+ LYLQ +D E
Sbjct: 4 SPIKAVQAPYYGDNFYRTPPPDLPSLLLKERIVYLGMPLVPAVTELIVAQLLYLQSDDPE 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAIYD M Y+KPPI T+C+G+A G AA+LL AG
Sbjct: 64 KPIKIYINSTGTSGYSGEPIGFETEAFAIYDTMKYIKPPIHTICIGSAMGMAAMLLSAGT 123
Query: 193 KGNRAALPSSTIMIKQ 208
KG RA+LP+++I++ Q
Sbjct: 124 KGCRASLPNASIILHQ 139
>gi|428221048|ref|YP_007105218.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
7502]
gi|427994388|gb|AFY73083.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
7502]
Length = 215
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/108 (62%), Positives = 87/108 (80%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
K RIVY+G+ V +VTELI AE LYLQYED +KPIY+YINSTGT + GE +GYETEAFA
Sbjct: 28 KERIVYIGLPLVAAVTELITAELLYLQYEDPDKPIYIYINSTGTGREDGEPVGYETEAFA 87
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I D M Y+KPPI T+C+G A G AA+LL +G KG RA+LP+++I+++Q
Sbjct: 88 IADTMRYIKPPIHTICIGTAIGAAAMLLSSGTKGLRASLPNASIVLRQ 135
>gi|359457307|ref|ZP_09245870.1| ATP-dependent Clp protease-like protein [Acaryochloris sp. CCMEE
5410]
Length = 228
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 93/132 (70%), Gaps = 11/132 (8%)
Query: 89 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYL 138
+ PPPDL S L K RIVYLGM S VTELI+A+ L+LQ++D +KPI+
Sbjct: 20 YRTPPPDLQSLLLKERIVYLGMPLFSSDDIKRQVGFDVTELIIAQLLFLQFDDPDKPIFF 79
Query: 139 YINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
YINSTGT+ GG+ +G+ETEAFAI D M Y+KPP+ T+C+G A G AA++L AG KG RA
Sbjct: 80 YINSTGTSWYGGDAIGFETEAFAICDTMSYIKPPVHTICIGQAMGTAAMILSAGTKGYRA 139
Query: 198 ALPSSTIMIKQA 209
+L +TI++ QA
Sbjct: 140 SLGHATIVLNQA 151
>gi|158335483|ref|YP_001516655.1| ATP-dependent Clp protease-like protein [Acaryochloris marina
MBIC11017]
gi|158305724|gb|ABW27341.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Acaryochloris marina MBIC11017]
Length = 228
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 93/132 (70%), Gaps = 11/132 (8%)
Query: 89 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYL 138
+ PPPDL S L K RIVYLGM S VTELI+A+ L+LQ++D +KPI+
Sbjct: 20 YRTPPPDLQSLLLKERIVYLGMPLFSSDDIKRQVGFDVTELIIAQLLFLQFDDPDKPIFF 79
Query: 139 YINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
YINSTGT+ GG+ +G+ETEAFAI D M Y+KPP+ T+C+G A G AA++L AG KG RA
Sbjct: 80 YINSTGTSWYGGDAIGFETEAFAICDTMSYIKPPVHTICIGQAMGTAAMILSAGTKGYRA 139
Query: 198 ALPSSTIMIKQA 209
+L +TI++ QA
Sbjct: 140 SLGHATIVLNQA 151
>gi|434393185|ref|YP_007128132.1| ATP-dependent Clp protease proteolytic subunit [Gloeocapsa sp. PCC
7428]
gi|428265026|gb|AFZ30972.1| ATP-dependent Clp protease proteolytic subunit [Gloeocapsa sp. PCC
7428]
Length = 219
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 100/137 (72%), Gaps = 1/137 (0%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
SP+ + P+ + PPPDL S L K RIVYLGM VP+VTEL++AE LYLQ ED
Sbjct: 2 ESPIKAVQAPYYGDNFYRTPPPDLPSLLLKERIVYLGMPLVPAVTELLIAELLYLQSEDP 61
Query: 133 EKPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
+KPI +YINSTGT+ GE +G+ETEAFAIYD M Y+KPPI T+C+G A G +A+LL AG
Sbjct: 62 DKPIRVYINSTGTSGYSGELVGFETEAFAIYDTMKYIKPPIHTICIGMAMGMSAMLLSAG 121
Query: 192 AKGNRAALPSSTIMIKQ 208
KG RA+LP +TI++ Q
Sbjct: 122 TKGCRASLPHATIVLHQ 138
>gi|16331161|ref|NP_441889.1| ATP-dependent Clp protease-like-protein [Synechocystis sp. PCC
6803]
gi|383322903|ref|YP_005383756.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326072|ref|YP_005386925.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383491956|ref|YP_005409632.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384437224|ref|YP_005651948.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451815317|ref|YP_007451769.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|18202351|sp|P74466.1|CLPR_SYNY3 RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit-like; AltName: Full=Endopeptidase Clp-like
gi|1653655|dbj|BAA18567.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|339274256|dbj|BAK50743.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|359272222|dbj|BAL29741.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359275392|dbj|BAL32910.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359278562|dbj|BAL36079.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|407961462|dbj|BAM54702.1| ATP-dependent Clp protease-like-protein [Bacillus subtilis
BEST7613]
gi|451781286|gb|AGF52255.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
Length = 225
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 94/132 (71%), Gaps = 11/132 (8%)
Query: 88 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIY 137
A++ PPPDL S L K RIVYLGM S VT+LI+A+ LYLQ++D +KPIY
Sbjct: 15 AFKTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIY 74
Query: 138 LYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
YINSTGT+ G+ +G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L +G KG R
Sbjct: 75 FYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSSGTKGYR 134
Query: 197 AALPSSTIMIKQ 208
A+LP +TI++ Q
Sbjct: 135 ASLPHATIVLNQ 146
>gi|428313412|ref|YP_007124389.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
gi|428255024|gb|AFZ20983.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
Length = 231
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 103/135 (76%), Gaps = 1/135 (0%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P+ + P+ T++ PPPDL S L RIVYLGM VP+VT+LI+AE L+LQY+D +K
Sbjct: 17 PIQAVQSPYYGNTSYRTPPPDLPSLLLNERIVYLGMPLVPAVTQLIIAELLFLQYQDPDK 76
Query: 135 PIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
PI +Y+NSTGT++ GE +G+ETEAFAI D M Y+KPPI T+C+G+A G AA+LL AG K
Sbjct: 77 PIKIYVNSTGTSRYDGEPIGFETEAFAICDTMSYIKPPIHTICLGSAMGMAAMLLSAGTK 136
Query: 194 GNRAALPSSTIMIKQ 208
G RA+LP+++I++ Q
Sbjct: 137 GCRASLPNASIVLHQ 151
>gi|427707094|ref|YP_007049471.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7107]
gi|427359599|gb|AFY42321.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7107]
Length = 220
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/136 (57%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ + PPPDL S L K RIVYLGM VP+VTELI+A+ LYLQ +D E
Sbjct: 4 SPIKAVQAPYYGDNFYRTPPPDLPSLLLKERIVYLGMPLVPAVTELIVAQLLYLQSDDPE 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAI+D M Y+KPPI T+C+G+A G AA+LL AG
Sbjct: 64 KPIKIYINSTGTSGYSGEPVGFETEAFAIFDTMKYIKPPIHTICIGSAMGMAAMLLSAGT 123
Query: 193 KGNRAALPSSTIMIKQ 208
KG RA+LP+++I++ Q
Sbjct: 124 KGCRASLPNASIILHQ 139
>gi|67921361|ref|ZP_00514879.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|416383635|ref|ZP_11684483.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|67856473|gb|EAM51714.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|357265221|gb|EHJ14014.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 226
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 94/137 (68%), Gaps = 11/137 (8%)
Query: 83 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDV 132
+ T + PPPDL S L K RI+YLG+ S VT+LI+A+ LYLQ+++
Sbjct: 10 YYGDTNFRTPPPDLESLLLKERIIYLGLPLFSSDEIKQQVGIDVTQLIIAQLLYLQFDNP 69
Query: 133 EKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EKPIY YINSTGT+ G+ +G+ETEAFAI D M Y+KPPI T+C+G A G AA++L AG
Sbjct: 70 EKPIYFYINSTGTSWYTGDAIGFETEAFAICDTMNYIKPPIHTICIGQAMGTAAMILSAG 129
Query: 192 AKGNRAALPSSTIMIKQ 208
KG RA+LP +TI++ Q
Sbjct: 130 TKGCRASLPHATIVLNQ 146
>gi|116073335|ref|ZP_01470597.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
gi|116068640|gb|EAU74392.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
Length = 221
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 92/137 (67%), Gaps = 11/137 (8%)
Query: 83 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDV 132
+ T PPPDL S + K RIVYLG+ VTELI+A+ LYL++++
Sbjct: 8 YGDSTVLRTPPPDLPSLMLKERIVYLGLPLFSDDDTKRQLGLDVTELIIAQLLYLEFDNP 67
Query: 133 EKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EKPIY YINSTGT+ G+ +G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L AG
Sbjct: 68 EKPIYFYINSTGTSWHTGDAIGFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSAG 127
Query: 192 AKGNRAALPSSTIMIKQ 208
KG RAALP S+I++ Q
Sbjct: 128 TKGQRAALPHSSIVLHQ 144
>gi|218439261|ref|YP_002377590.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 7424]
gi|218171989|gb|ACK70722.1| Endopeptidase Clp [Cyanothece sp. PCC 7424]
Length = 228
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 92/131 (70%), Gaps = 11/131 (8%)
Query: 89 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYL 138
+ PPPDL S L K RIVYLGM S VT+LI+A+ LYLQ++D +KPIY
Sbjct: 18 FRTPPPDLESLLLKERIVYLGMPLFSSDEIKQQVGIDVTQLIIAQLLYLQFDDPDKPIYF 77
Query: 139 YINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
YINSTGT+ G+ +G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L AG KG RA
Sbjct: 78 YINSTGTSWYTGDAIGFETEAFAICDTINYIKPPVHTICIGQAMGTAAMILSAGTKGCRA 137
Query: 198 ALPSSTIMIKQ 208
+LP +TI++ Q
Sbjct: 138 SLPHATIVLNQ 148
>gi|172036825|ref|YP_001803326.1| ATP-dependent Clp protease-like protein [Cyanothece sp. ATCC 51142]
gi|354554634|ref|ZP_08973938.1| Endopeptidase Clp [Cyanothece sp. ATCC 51472]
gi|171698279|gb|ACB51260.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353553443|gb|EHC22835.1| Endopeptidase Clp [Cyanothece sp. ATCC 51472]
Length = 226
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 92/131 (70%), Gaps = 11/131 (8%)
Query: 89 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYL 138
+ PPPDL S L K RI+YLG+ S VT+LI+A+ LYLQ+++ EKPIY
Sbjct: 16 FRTPPPDLESLLLKERIIYLGLPLFSSDEIKQQVGIDVTQLIIAQLLYLQFDNPEKPIYF 75
Query: 139 YINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
YINSTGT+ G+ +G+ETEAFAI D M YVKPPI T+C+G A G AA++L AG KG RA
Sbjct: 76 YINSTGTSWYTGDAIGFETEAFAICDTMNYVKPPIHTICIGQAMGTAAMILSAGTKGCRA 135
Query: 198 ALPSSTIMIKQ 208
+LP +TI++ Q
Sbjct: 136 SLPHATIVLNQ 146
>gi|427418190|ref|ZP_18908373.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
7375]
gi|425760903|gb|EKV01756.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
7375]
Length = 230
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 96/139 (69%), Gaps = 12/139 (8%)
Query: 82 PFTSG-TAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYE 130
P+ G A+ PPPDL S L K RIVYLG V S VT LI+A+ LYL+++
Sbjct: 11 PYYGGDAAFRTPPPDLQSLLLKERIVYLGTPLVSSDDYKRQMGMDVTRLIIAQLLYLEFD 70
Query: 131 DVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
D +KPIY YINSTGT+ G+ LG+ETEAFAI D M Y++PP+ T+C+G A G A+++L
Sbjct: 71 DPDKPIYFYINSTGTSWYTGDALGFETEAFAICDTMRYIRPPVHTICIGQAMGTASMILA 130
Query: 190 AGAKGNRAALPSSTIMIKQ 208
AG KG RA+LP++TI++ Q
Sbjct: 131 AGTKGFRASLPNATIVLNQ 149
>gi|284929272|ref|YP_003421794.1| protease subunit of ATP-dependent protease [cyanobacterium UCYN-A]
gi|284809716|gb|ADB95413.1| protease subunit of ATP-dependent protease [cyanobacterium UCYN-A]
Length = 226
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 92/131 (70%), Gaps = 11/131 (8%)
Query: 89 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYL 138
+ PPPDL S L K RI+YLG+ S VT+LI+A+ LYLQ+++ +KPI+
Sbjct: 16 FRTPPPDLESLLLKERIIYLGLPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDNPDKPIFF 75
Query: 139 YINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
YINSTGT+ G+ +G+ETEAFAI D M YVKPPI T+C+G A G AA++L AG KG RA
Sbjct: 76 YINSTGTSWHTGDAVGFETEAFAICDTMNYVKPPIHTICIGQAMGTAAMILSAGTKGCRA 135
Query: 198 ALPSSTIMIKQ 208
+LP +TI++ Q
Sbjct: 136 SLPHATIVLNQ 146
>gi|307152498|ref|YP_003887882.1| endopeptidase Clp [Cyanothece sp. PCC 7822]
gi|306982726|gb|ADN14607.1| Endopeptidase Clp [Cyanothece sp. PCC 7822]
Length = 222
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 93/132 (70%), Gaps = 11/132 (8%)
Query: 88 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIY 137
++ PPPDL S L K RIVYLGM S VT+LI+A+ L+LQ++D +KPIY
Sbjct: 11 SFRTPPPDLESLLLKERIVYLGMPLFSSDDIKQQVGIDVTQLIIAQLLFLQFDDPDKPIY 70
Query: 138 LYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
YINSTGT+ G+ +G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L AG KG R
Sbjct: 71 FYINSTGTSWYTGDAIGFETEAFAICDTINYIKPPVHTICIGQAMGTAAMILSAGTKGCR 130
Query: 197 AALPSSTIMIKQ 208
A+LP +TI++ Q
Sbjct: 131 ASLPHATIVLNQ 142
>gi|298713496|emb|CBJ27051.1| ATP-dependent Clp protease proteolytic subunit [Ectocarpus
siliculosus]
Length = 323
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKLGYETEAFA 160
NRIVYLGM VP+VTELI+AE LYL YE KP+Y+YIN+ GT T G +G+ETEAFA
Sbjct: 119 HNRIVYLGMPLVPAVTELIIAELLYLNYESASKPVYMYINTPGTSTPDGRAIGFETEAFA 178
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I D M Y+KPP++T+ VG A+G A+LL +G KG+R+ALP+++IM+ Q
Sbjct: 179 ISDCMNYIKPPVYTIGVGQAFGLGAMLLASGEKGHRSALPNASIMLHQ 226
>gi|443323687|ref|ZP_21052691.1| protease subunit of ATP-dependent protease [Gloeocapsa sp. PCC
73106]
gi|442786669|gb|ELR96398.1| protease subunit of ATP-dependent protease [Gloeocapsa sp. PCC
73106]
Length = 229
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 100/139 (71%), Gaps = 11/139 (7%)
Query: 82 PFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVP----------SVTELILAEFLYLQYED 131
P+T + PPPDL S L K RIVYLG+ + VTELI+A+ LYLQ++D
Sbjct: 12 PYTGDAYYRTPPPDLPSLLLKERIVYLGLPLISPDEYKDQIGIDVTELIVAQLLYLQFDD 71
Query: 132 VEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGA 190
+KPIY+YINSTGT+ GGE +G+ETEAFAIYD + Y+KPP+ T+C+G A G AA++L A
Sbjct: 72 PDKPIYMYINSTGTSWYGGEAIGFETEAFAIYDTLKYIKPPVHTICIGQAMGTAAMILAA 131
Query: 191 GAKGNRAALPSSTIMIKQA 209
GAKG RA+LP +TI++ QA
Sbjct: 132 GAKGCRASLPHATIILHQA 150
>gi|428207692|ref|YP_007092045.1| endopeptidase Clp [Chroococcidiopsis thermalis PCC 7203]
gi|428009613|gb|AFY88176.1| Endopeptidase Clp [Chroococcidiopsis thermalis PCC 7203]
Length = 219
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ + PPPDL S L K RIVYLGM VP+VTELI+AE LYLQ +D +
Sbjct: 3 SPIKAVQAPYYGDNFYRTPPPDLPSLLLKERIVYLGMPLVPAVTELIIAELLYLQSDDPD 62
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAIYD + Y+KPP+ T+C+G+A G AA+LL AG
Sbjct: 63 KPIKIYINSTGTSSYNGEPIGFETEAFAIYDTLRYIKPPVHTICIGSAMGMAAMLLSAGT 122
Query: 193 KGNRAALPSSTIMIKQ 208
G RA+LP++ I++ Q
Sbjct: 123 PGCRASLPNANIILHQ 138
>gi|297849204|ref|XP_002892483.1| ClpP protease complex subunit ClpR3 [Arabidopsis lyrata subsp.
lyrata]
gi|297338325|gb|EFH68742.1| ClpP protease complex subunit ClpR3 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 87/118 (73%), Gaps = 1/118 (0%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGE 150
PPPDL S L RIVY+GM VP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+ GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G E+E FAIYD + +K + T+CVG A G+A LLL AG KGNR +P + MI+Q
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGNRFMMPHAKAMIQQ 235
>gi|332706286|ref|ZP_08426353.1| protease subunit of ATP-dependent Clp protease [Moorea producens
3L]
gi|332354934|gb|EGJ34407.1| protease subunit of ATP-dependent Clp protease [Moorea producens
3L]
Length = 281
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 87/107 (81%), Gaps = 1/107 (0%)
Query: 103 NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAI 161
RIVYLGM V +VTELI+AE LYLQY+D +KPI +YINSTGT++ G+ +G+ETEAFAI
Sbjct: 95 ERIVYLGMPLVSAVTELIIAELLYLQYDDPDKPIKIYINSTGTSRYDGQPVGFETEAFAI 154
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D + Y+KPPI T+C+G+A G AA+LL AG KG RA+LP++TI++ Q
Sbjct: 155 CDTINYIKPPIHTICIGSALGMAAMLLSAGTKGCRASLPNATIVLHQ 201
>gi|428317796|ref|YP_007115678.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria
nigro-viridis PCC 7112]
gi|428241476|gb|AFZ07262.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria
nigro-viridis PCC 7112]
Length = 219
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 87/108 (80%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
K RIVYLGM VP+VTELI+AE L+LQYED +KPI +YINSTGT+ GE +G+ETEAFA
Sbjct: 31 KERIVYLGMPLVPAVTELIIAELLFLQYEDPDKPIKIYINSTGTSGYSGEPVGFETEAFA 90
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I D + Y+KPP+ T+C+G+A G +A+LL AG KG RA+LP ++I++ Q
Sbjct: 91 ICDTIKYIKPPVHTICLGSAMGMSAMLLAAGTKGFRASLPHASIVLHQ 138
>gi|224009932|ref|XP_002293924.1| catalytic subunit of clp protein superfamily [Thalassiosira
pseudonana CCMP1335]
gi|220970596|gb|EED88933.1| catalytic subunit of clp protein superfamily [Thalassiosira
pseudonana CCMP1335]
Length = 225
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFA 160
NRIVY+GM VP+VTEL++AE LYL YED KP+ +YINS+GTT G+ +G+ETEAFA
Sbjct: 35 HNRIVYIGMPLVPAVTELVIAELLYLNYEDQSKPVTMYINSSGTTTANGQAVGFETEAFA 94
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I DVM Y++PP+ T+ +G A+G AA++L G KG RAALP++TI + Q
Sbjct: 95 IADVMKYIRPPVNTVAIGQAFGAAAMILSQGRKGGRAALPNATIRLNQ 142
>gi|427714499|ref|YP_007063123.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
gi|427378628|gb|AFY62580.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
Length = 219
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
K RIVYLGM VP+VTEL++A+ L+LQY+D EKPI +YINSTGT++ GE +G+ETEAFA
Sbjct: 31 KERIVYLGMPLVPAVTELLVAQLLFLQYDDPEKPIRIYINSTGTSRYDGEPVGFETEAFA 90
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I D + Y+KPP+ T+C+G A G AALLL AG KG RA+L +TI++ Q
Sbjct: 91 ICDTINYIKPPVHTICLGQAMGMAALLLSAGTKGYRASLAHATIVMHQ 138
>gi|334118045|ref|ZP_08492135.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333460030|gb|EGK88640.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 219
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 87/108 (80%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
K RIVYLGM VP+VTELI+AE L+LQYED +KPI +YINSTGT+ GE +G+ETEAFA
Sbjct: 31 KERIVYLGMPLVPAVTELIIAELLFLQYEDPDKPIKIYINSTGTSGYSGEPVGFETEAFA 90
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I D + Y+KPP+ T+C+G+A G +A+LL AG KG RA+LP ++I++ Q
Sbjct: 91 ICDTIRYIKPPVHTICLGSAMGMSAMLLAAGTKGFRASLPHASIVLHQ 138
>gi|126657895|ref|ZP_01729048.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
gi|126620835|gb|EAZ91551.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
Length = 226
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 92/131 (70%), Gaps = 11/131 (8%)
Query: 89 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYL 138
+ PPPDL S L K RI+YLG+ S VT+LI+A+ LYLQ+++ +KPI+
Sbjct: 16 FRTPPPDLESLLLKERIIYLGLPLFSSDEIKQQVGIDVTQLIIAQLLYLQFDNPDKPIFF 75
Query: 139 YINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
YINSTGT+ G+ +G+ETEAFAI D M YVKPPI T+C+G A G AA++L AG KG RA
Sbjct: 76 YINSTGTSWYTGDAIGFETEAFAICDTMNYVKPPIHTICIGQAMGTAAMILSAGTKGCRA 135
Query: 198 ALPSSTIMIKQ 208
+LP +TI++ Q
Sbjct: 136 SLPHATIVLNQ 146
>gi|254409400|ref|ZP_05023181.1| Clp protease [Coleofasciculus chthonoplastes PCC 7420]
gi|196183397|gb|EDX78380.1| Clp protease [Coleofasciculus chthonoplastes PCC 7420]
Length = 223
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 87/107 (81%), Gaps = 1/107 (0%)
Query: 103 NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAI 161
RIVYLG+ VP VTELI+AE LYLQY++ +KPI +YINSTGT++ GE +G+ETEAFAI
Sbjct: 37 ERIVYLGLPLVPQVTELIVAELLYLQYDNPDKPIKIYINSTGTSRYDGEPIGFETEAFAI 96
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D M Y++PPI T+C+G+A G AA+LL AG KG RA+LP+++I++ Q
Sbjct: 97 CDTMNYIQPPIHTICIGSAMGMAAMLLSAGTKGCRASLPNASIVLHQ 143
>gi|443324641|ref|ZP_21053380.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
gi|442795740|gb|ELS05088.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
Length = 224
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 88/119 (73%), Gaps = 11/119 (9%)
Query: 102 KNRIVYLGMSFVP----------SVTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ V VTELI+A+ L+LQ++D EKPIY+YINSTGT+ GG+
Sbjct: 27 KERIVYLGLPLVSPDEYKDQIGVDVTELIVAQLLFLQFDDPEKPIYMYINSTGTSWYGGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQA 209
+G+ETEAFAI D M Y+KPP+ T+C+G A G AA++L AGAKG RA+LP +TI++ QA
Sbjct: 87 SIGFETEAFAICDTMNYIKPPVHTICIGQAMGTAAMILSAGAKGCRASLPHATIILHQA 145
>gi|334182410|ref|NP_001184945.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
gi|332190278|gb|AEE28399.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
Length = 370
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 86/118 (72%), Gaps = 1/118 (0%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGE 150
PPPDL S L RIVY+GM VP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+ GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G E+E FAIYD + +K + T+CVG A G+A LLL AG KG R +P + MI+Q
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQ 235
>gi|113954996|ref|YP_729944.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CC9311]
gi|113882347|gb|ABI47305.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9311]
Length = 225
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 90/128 (70%), Gaps = 11/128 (8%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYIN 141
PPPDL S + K RIVYLG+ VTELI+A+ L+L++++ +KPIY YIN
Sbjct: 21 PPPDLPSLMLKERIVYLGLPLFSDGDAKRQMGLDVTELIIAQLLFLEFDNPDKPIYFYIN 80
Query: 142 STGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALP 200
STGT+ GE +G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP
Sbjct: 81 STGTSWYSGESIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALP 140
Query: 201 SSTIMIKQ 208
++I++ Q
Sbjct: 141 HASIVLHQ 148
>gi|427721126|ref|YP_007069120.1| ATP-dependent Clp protease proteolytic subunit [Calothrix sp. PCC
7507]
gi|427353562|gb|AFY36286.1| ATP-dependent Clp protease proteolytic subunit [Calothrix sp. PCC
7507]
Length = 220
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ ++ PPPDL S L K RIVYLGM V +VTELI+AE L+LQ +D +
Sbjct: 4 SPIKAVQAPYYGDNSYRTPPPDLPSLLLKERIVYLGMPLVAAVTELIVAELLFLQSDDPD 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAI+D M Y+KPPI T+C+G+A G AA+LL AG
Sbjct: 64 KPIKIYINSTGTSGYSGEPIGFETEAFAIFDTMKYIKPPIHTICIGSAMGMAAMLLSAGT 123
Query: 193 KGNRAALPSSTIMIKQ 208
G RA+LP ++I++ Q
Sbjct: 124 PGCRASLPHASIILHQ 139
>gi|352096271|ref|ZP_08957151.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
gi|351676965|gb|EHA60116.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
Length = 225
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 90/128 (70%), Gaps = 11/128 (8%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYIN 141
PPPDL S + K RIVYLG+ VTELI+A+ L+L++++ +KPIY YIN
Sbjct: 21 PPPDLPSLMLKERIVYLGLPLFSDGDTKRQLGLDVTELIIAQLLFLEFDNPDKPIYFYIN 80
Query: 142 STGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALP 200
STGT+ GE +G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP
Sbjct: 81 STGTSWYSGESIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALP 140
Query: 201 SSTIMIKQ 208
++I++ Q
Sbjct: 141 HASIVLHQ 148
>gi|18390982|ref|NP_563836.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
gi|79317437|ref|NP_001031008.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
gi|75301131|sp|Q8L770.1|CLPR3_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 3, chloroplastic; Short=ClpR3;
AltName: Full=nClpP8; Flags: Precursor
gi|22531207|gb|AAM97107.1| ATP-dependent Clp protease proteolytic subunit (ClpR3), putative
[Arabidopsis thaliana]
gi|25083963|gb|AAN72143.1| ATP-dependent Clp protease proteolytic subunit (ClpR3), putative
[Arabidopsis thaliana]
gi|51968388|dbj|BAD42886.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51968776|dbj|BAD43080.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51968816|dbj|BAD43100.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51969676|dbj|BAD43530.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51969856|dbj|BAD43620.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51969858|dbj|BAD43621.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971032|dbj|BAD44208.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971379|dbj|BAD44354.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971381|dbj|BAD44355.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971625|dbj|BAD44477.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971739|dbj|BAD44534.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|110742786|dbj|BAE99296.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|332190276|gb|AEE28397.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
gi|332190277|gb|AEE28398.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
Length = 330
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 86/118 (72%), Gaps = 1/118 (0%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGE 150
PPPDL S L RIVY+GM VP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+ GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G E+E FAIYD + +K + T+CVG A G+A LLL AG KG R +P + MI+Q
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQ 235
>gi|87125531|ref|ZP_01081376.1| ATP-dependent Clp protease proteolytic subunit 4 [Synechococcus sp.
RS9917]
gi|86166831|gb|EAQ68093.1| ATP-dependent Clp protease proteolytic subunit 4 [Synechococcus sp.
RS9917]
Length = 211
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 90/128 (70%), Gaps = 11/128 (8%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYIN 141
PPPDL S + K RIVYLG+ VTELI+A+ LYL++++ +KPIY YIN
Sbjct: 4 PPPDLPSLMLKERIVYLGLPLFSDDDTKRQLGLDVTELIIAQLLYLEFDNPDKPIYFYIN 63
Query: 142 STGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALP 200
STGT+ G+ +G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP
Sbjct: 64 STGTSWYTGDAIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALP 123
Query: 201 SSTIMIKQ 208
++I++ Q
Sbjct: 124 HASIVLHQ 131
>gi|51970012|dbj|BAD43698.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
Length = 315
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 86/118 (72%), Gaps = 1/118 (0%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGE 150
PPPDL S L RIVY+GM VP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+ GE
Sbjct: 103 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 162
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G E+E FAIYD + +K + T+CVG A G+A LLL AG KG R +P + MI+Q
Sbjct: 163 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQ 220
>gi|282896314|ref|ZP_06304336.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281198810|gb|EFA73689.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 229
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 96/146 (65%), Gaps = 11/146 (7%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVP----------SVTELILAE 123
SP+ + + S + PPPDLAS L K RIVYLG V VT+LI+A+
Sbjct: 4 SPIKAVQTSYYSDNWYRTPPPDLASLLLKERIVYLGTPLVSPDEYKRQMGVDVTKLIIAQ 63
Query: 124 FLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWG 182
LYL++++ EKPI+ YINSTGT+ G+ +GYETEAFAI D + Y+K P+ T+C+G A G
Sbjct: 64 LLYLKFDNPEKPIFFYINSTGTSWYTGDAIGYETEAFAICDTIDYIKTPVHTICIGQAIG 123
Query: 183 EAALLLGAGAKGNRAALPSSTIMIKQ 208
AAL+L G KG RA+LP +TI++ Q
Sbjct: 124 TAALILSCGTKGFRASLPHATIVLNQ 149
>gi|148908273|gb|ABR17251.1| unknown [Picea sitchensis]
Length = 158
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 62/71 (87%), Positives = 67/71 (94%)
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
+YINSTGTTK GEKLGYETEAFA+YD M YVKPPIFTLC+GNAWGEA+LLL AGAKGNRA
Sbjct: 1 MYINSTGTTKDGEKLGYETEAFAVYDTMRYVKPPIFTLCIGNAWGEASLLLAAGAKGNRA 60
Query: 198 ALPSSTIMIKQ 208
+LPSSTIMIKQ
Sbjct: 61 SLPSSTIMIKQ 71
>gi|449019594|dbj|BAM82996.1| ATP-dependent Clp protease proteolytic subunit [Cyanidioschyzon
merolae strain 10D]
Length = 288
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 82/108 (75%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
NRIVY+GM V ELI+AE LYL Y D +KP+Y+YINSTGT G G+ET+AFA
Sbjct: 98 HNRIVYIGMPLTAPVCELIIAELLYLNYNDPDKPVYVYINSTGTMGLDGSTAGFETDAFA 157
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I D M Y+KPP++T+CVG+A+G AA++L G KGNRAALP+++IM+ Q
Sbjct: 158 IIDTMNYIKPPVYTICVGSAFGLAAVILACGDKGNRAALPNASIMLHQ 205
>gi|219113429|ref|XP_002186298.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583148|gb|ACI65768.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 199
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKLGYETEAFA 160
NRIVY+GM VP+VTEL++AE LYL YE +PI +YINS+GT T G+ +G+ETEAFA
Sbjct: 11 HNRIVYIGMPLVPAVTELVIAELLYLNYESTTEPITMYINSSGTSTANGQAVGFETEAFA 70
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I DVM YV+PP+ T+ +G A+G AA+LL G +G+R ALP++TI++ Q
Sbjct: 71 IADVMKYVRPPVHTVALGQAFGAAAMLLSQGKRGSRFALPNATILLNQ 118
>gi|51971563|dbj|BAD44446.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
Length = 330
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 86/118 (72%), Gaps = 1/118 (0%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGE 150
PPPDL S L RIVY+GM VP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+ GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G E+E FAIYD + +K + T+CVG A G+A LLL AG KG R +P + MI++
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQR 235
>gi|422295344|gb|EKU22643.1| atp-dependent clp protease proteolytic subunit [Nannochloropsis
gaditana CCMP526]
Length = 310
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 81/108 (75%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTG-TTKGGEKLGYETEAFA 160
NRIVYLGM+ VP+VTELI+AE LYL YE ++PIY+YINS G + G +G++TEAFA
Sbjct: 88 HNRIVYLGMALVPAVTELIIAELLYLNYESQDRPIYMYINSPGISAPDGRAMGFDTEAFA 147
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I DVM Y++ PI T+CVG +G AA+LL G KG R +LP+ +IM+ Q
Sbjct: 148 IADVMSYIRAPIATVCVGQCFGSAAMLLACGTKGQRYSLPNGSIMLHQ 195
>gi|443310465|ref|ZP_21040116.1| protease subunit of ATP-dependent protease [Synechocystis sp. PCC
7509]
gi|442779503|gb|ELR89745.1| protease subunit of ATP-dependent protease [Synechocystis sp. PCC
7509]
Length = 228
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 87/119 (73%), Gaps = 11/119 (9%)
Query: 102 KNRIVYLGMSFVP----------SVTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ V VTELI+A+ LYLQY+D EKPIY+YINSTGT+ GG+
Sbjct: 30 KERIVYLGLPLVTPDEYKQQLGVDVTELIIAQLLYLQYDDPEKPIYIYINSTGTSWYGGD 89
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQA 209
+G ETEAFAI D + Y+KPP+ T+C+G A G AA++L AG KG RA+LP++TI++ QA
Sbjct: 90 AIGAETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSAGTKGFRASLPNATIVLHQA 148
>gi|434399880|ref|YP_007133884.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
gi|428270977|gb|AFZ36918.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
Length = 228
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 101/147 (68%), Gaps = 11/147 (7%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVP----------SVTELILAE 123
SP+ + P+ + PPPDL S L K RI+YLG+ V VTELI+A+
Sbjct: 3 SPIQAVQAPYRGDAYYRTPPPDLPSLLLKERIIYLGLPLVSPDEYKDQIGIDVTELIIAQ 62
Query: 124 FLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWG 182
L+LQ++D +KPIY+YINSTGT+ GGE +G+ETEAFAI D M Y+KPP+ T+C+G A G
Sbjct: 63 LLFLQFDDPDKPIYMYINSTGTSWYGGESIGFETEAFAICDTMNYIKPPVHTICIGQAMG 122
Query: 183 EAALLLGAGAKGNRAALPSSTIMIKQA 209
AA++L +G KG RA+LP +TI++ QA
Sbjct: 123 TAAMILASGTKGCRASLPHATIILHQA 149
>gi|282900570|ref|ZP_06308512.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281194370|gb|EFA69325.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 229
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 96/146 (65%), Gaps = 11/146 (7%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVP----------SVTELILAE 123
SP+ + + S + PPPDLAS L K RIVYLG V VT+LI+A+
Sbjct: 4 SPIKAVQTSYYSDNWYRTPPPDLASLLLKERIVYLGTPLVSPDEYKRQMGVDVTKLIIAQ 63
Query: 124 FLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWG 182
LYL++++ +KPI+ YINSTGT+ G+ +GYETEAFAI D + Y+K P+ T+C+G A G
Sbjct: 64 LLYLKFDNPDKPIFFYINSTGTSWYTGDAIGYETEAFAICDTIDYIKTPVHTICIGQAIG 123
Query: 183 EAALLLGAGAKGNRAALPSSTIMIKQ 208
AAL+L G KG RA+LP +TI++ Q
Sbjct: 124 TAALILSCGTKGFRASLPHATIVLNQ 149
>gi|428771385|ref|YP_007163175.1| ATP-dependent Clp protease proteolytic subunit [Cyanobacterium
aponinum PCC 10605]
gi|428685664|gb|AFZ55131.1| ATP-dependent Clp protease proteolytic subunit [Cyanobacterium
aponinum PCC 10605]
Length = 227
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/147 (51%), Positives = 101/147 (68%), Gaps = 11/147 (7%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVP----------SVTELILAE 123
SP+ + P+ + PPPDL S L K RIVYLG+ V VTELI+A+
Sbjct: 3 SPIQAVSAPYRGDAYYRTPPPDLPSLLLKERIVYLGLPLVSPDEYKDQLGVDVTELIIAQ 62
Query: 124 FLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWG 182
LYLQ++D EKPIYLYINSTGT+ GG+ +G+ETEAFAI D + Y+KPP+ T+C+G A G
Sbjct: 63 LLYLQFDDPEKPIYLYINSTGTSWYGGDSIGFETEAFAICDTINYIKPPVHTICLGQAMG 122
Query: 183 EAALLLGAGAKGNRAALPSSTIMIKQA 209
AA++L +G KG RA+LP +TI++ QA
Sbjct: 123 TAAMILASGTKGCRASLPHATIILHQA 149
>gi|428215429|ref|YP_007088573.1| protease subunit of ATP-dependent protease [Oscillatoria acuminata
PCC 6304]
gi|428003810|gb|AFY84653.1| protease subunit of ATP-dependent protease [Oscillatoria acuminata
PCC 6304]
Length = 217
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 85/108 (78%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFA 160
K RIVYLGM VP VTELI+++ LYLQY+D EKPI +YINSTGT+ + G+ + +ETEAFA
Sbjct: 31 KERIVYLGMPLVPKVTELIISQLLYLQYDDPEKPINIYINSTGTSNESGQPVAFETEAFA 90
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I D + Y+KPP+ T+C+G A G +A+LL AG KG R +LP++TI++ Q
Sbjct: 91 ICDTIKYIKPPVNTICIGMAVGMSAMLLSAGTKGCRTSLPNATIVLHQ 138
>gi|428778680|ref|YP_007170466.1| protease subunit of ATP-dependent protease [Dactylococcopsis salina
PCC 8305]
gi|428692959|gb|AFZ49109.1| protease subunit of ATP-dependent protease [Dactylococcopsis salina
PCC 8305]
Length = 228
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/146 (52%), Positives = 101/146 (69%), Gaps = 11/146 (7%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVP----------SVTELILAE 123
SP+ + P+ G PPPDL S L K RIVYLG+ V VTELI+A+
Sbjct: 3 SPIRGVQAPYYGGGNTRTPPPDLPSLLLKERIVYLGLPLVSPDEYKEQIGIDVTELIIAQ 62
Query: 124 FLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWG 182
LYLQ+ED EKPIY+YINSTGT+ GGE +G+ETEAFAI D + Y++PP+ T+C+G A G
Sbjct: 63 LLYLQFEDREKPIYMYINSTGTSWYGGESIGFETEAFAICDTLNYIEPPVNTICIGQAMG 122
Query: 183 EAALLLGAGAKGNRAALPSSTIMIKQ 208
AA++L +G KG RA+LP++TI++ Q
Sbjct: 123 TAAMILSSGTKGYRASLPNATIILNQ 148
>gi|428774096|ref|YP_007165884.1| endopeptidase Clp [Cyanobacterium stanieri PCC 7202]
gi|428688375|gb|AFZ48235.1| Endopeptidase Clp [Cyanobacterium stanieri PCC 7202]
Length = 228
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 102/147 (69%), Gaps = 11/147 (7%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVP----------SVTELILAE 123
SP+ + P+ + PPPDL S L K RIVYLG+ V VTELI+A+
Sbjct: 3 SPIQAVQAPYRGDAYYRTPPPDLPSLLLKERIVYLGLPLVSPDEYKDQIGIDVTELIIAQ 62
Query: 124 FLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWG 182
L+LQ++D +KPIYLYINSTGT+ GGE +G+ETEAFAI D + Y+KPP+ T+C+G A G
Sbjct: 63 LLFLQFDDPDKPIYLYINSTGTSWYGGESIGFETEAFAICDTINYIKPPVHTICLGQAMG 122
Query: 183 EAALLLGAGAKGNRAALPSSTIMIKQA 209
AA++L +G KG RA+LP++TI++ Q+
Sbjct: 123 TAAMILASGTKGCRASLPNATIILHQS 149
>gi|428776589|ref|YP_007168376.1| endopeptidase Clp [Halothece sp. PCC 7418]
gi|428690868|gb|AFZ44162.1| Endopeptidase Clp [Halothece sp. PCC 7418]
Length = 228
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/146 (52%), Positives = 99/146 (67%), Gaps = 11/146 (7%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVP----------SVTELILAE 123
SP+ + P+ G PPPDL S L K RIVYLG+ V VTELI+A+
Sbjct: 3 SPIEAVQAPYYGGGNTRTPPPDLPSLLLKERIVYLGLPLVSPDEYKEQLGIDVTELIIAQ 62
Query: 124 FLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWG 182
LYLQ+ED EKPIY+YINSTGT+ GGE +G+ETEAFAI D + Y+ PP+ T+C+G A G
Sbjct: 63 LLYLQFEDREKPIYMYINSTGTSWYGGESIGFETEAFAICDTINYIAPPVNTICIGQAMG 122
Query: 183 EAALLLGAGAKGNRAALPSSTIMIKQ 208
AA++L +G KG RA+LP +TI++ Q
Sbjct: 123 TAAMILSSGTKGYRASLPHATIILNQ 148
>gi|55792477|gb|AAV65338.1| plastid catalytic subunit of ClpP5 protease [Prototheca
wickerhamii]
Length = 251
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEK 151
PPDL S L RI Y+GM VP+VTEL+++E L+L Y KP+Y+YINSTG+ + GGE
Sbjct: 141 PPDLPSLLLDGRICYIGMPLVPAVTELVISELLWLNYSSPTKPVYVYINSTGSQREGGES 200
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSS 202
+G+ETEA AI D M Y++P I+TL +G A G AA+LL +G KG+R ALP S
Sbjct: 201 VGFETEATAIMDTMAYIRPDIYTLVIGQACGNAAMLLASGKKGHRFALPHS 251
>gi|384251987|gb|EIE25464.1| hypothetical protein COCSUDRAFT_52875 [Coccomyxa subellipsoidea
C-169]
Length = 221
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAIY 162
RI YLGM VP+VTELI+AE LYLQY+D KPIYLYINSTGTT+ GE +G+ETE AIY
Sbjct: 23 RITYLGMPLVPAVTELIIAELLYLQYKDRTKPIYLYINSTGTTRADGETVGFETEGTAIY 82
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D M +VK + T+ VG A G+A +LL AG KG R LP +T M++Q
Sbjct: 83 DTMQFVKNEVHTVGVGVAMGQACMLLSAGHKGKRFMLPHATAMLQQ 128
>gi|170077810|ref|YP_001734448.1| ATP-dependent Clp protease-like protein [Synechococcus sp. PCC
7002]
gi|169885479|gb|ACA99192.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 228
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 102/148 (68%), Gaps = 12/148 (8%)
Query: 74 SPVITMVIPFTSG-TAWEQPPPDLASYLYKNRIVYLGMSFVP----------SVTELILA 122
SP+ + P+ G + + PPPDL S L K RIVYLG+ V VTELI+A
Sbjct: 3 SPIQAVQAPYRGGGSTYRTPPPDLPSLLLKERIVYLGLPLVSPDEYKDQIGVDVTELIIA 62
Query: 123 EFLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAW 181
+ L+LQ++D +KPIY+YINSTGT+ GG+ +G+ETEAFAI D + Y+ PP+ T+C+G A
Sbjct: 63 QLLFLQFDDPDKPIYMYINSTGTSWYGGDSIGFETEAFAICDTLNYITPPVHTICLGQAM 122
Query: 182 GEAALLLGAGAKGNRAALPSSTIMIKQA 209
G AA++L AG KG RA+LP STI++ QA
Sbjct: 123 GTAAMILAAGTKGCRASLPHSTIILHQA 150
>gi|354567564|ref|ZP_08986733.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353542836|gb|EHC12297.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 225
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 93/140 (66%), Gaps = 5/140 (3%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ + PPPDL S L K RIVYLG VT+LI+AE LYLQ ED +
Sbjct: 4 SPIKAVQAPYYGDNFYRTPPPDLPSLLLKERIVYLGTPLFAEVTKLIIAELLYLQSEDPD 63
Query: 134 KPIYLYINSTGTTKG-----GEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
KPI +YINSTGT+ G G+ETEAFAIYD M Y+KPPI T+C+G A G AA+LL
Sbjct: 64 KPIKIYINSTGTSDGSSGQMARLFGFETEAFAIYDTMKYIKPPIHTICIGKAVGMAAVLL 123
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
AG KG RA+L S+I++ Q
Sbjct: 124 SAGTKGCRASLAHSSIVLHQ 143
>gi|427724370|ref|YP_007071647.1| ATP-dependent Clp protease proteolytic subunit [Leptolyngbya sp.
PCC 7376]
gi|427356090|gb|AFY38813.1| ATP-dependent Clp protease proteolytic subunit [Leptolyngbya sp.
PCC 7376]
Length = 230
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 86/119 (72%), Gaps = 11/119 (9%)
Query: 102 KNRIVYLGMSFVP----------SVTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ V VTELI+A+ L+LQ++D +KPI++YINSTGT+ GG+
Sbjct: 33 KERIVYLGLPLVSPDEYKDQIGVDVTELIIAQLLFLQFDDPDKPIFMYINSTGTSWYGGD 92
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQA 209
+G+ETEAFAI D + Y+ PP+ T+C+G A G AA++L AG KG RA+LP STI++ QA
Sbjct: 93 SIGFETEAFAICDTLNYITPPVHTICLGQAMGTAAMILAAGTKGCRASLPHSTIILHQA 151
>gi|443478433|ref|ZP_21068188.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena
biceps PCC 7429]
gi|443016285|gb|ELS30981.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena
biceps PCC 7429]
Length = 252
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 86/119 (72%), Gaps = 11/119 (9%)
Query: 102 KNRIVYLGMSFVP----------SVTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RI+Y G+ V VTEL++A+ LYLQYED EKPI++YINSTGT+ G+
Sbjct: 55 KERIIYFGLPLVSPDEYKQQLGVDVTELLIAQLLYLQYEDPEKPIFMYINSTGTSWYTGD 114
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQA 209
+G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L +G KG RA+LP++TI++ QA
Sbjct: 115 AIGFETEAFAICDTLNYIKPPVHTICLGQAMGTAAMILASGTKGFRASLPNATIVLHQA 173
>gi|88809169|ref|ZP_01124678.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
gi|88787111|gb|EAR18269.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
Length = 223
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 83/118 (70%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL+++D +KPIY YINSTGTT G+
Sbjct: 27 KERIVYLGLPLFSDDDTKRQVGIDVTELIIAQLLYLEFDDPDKPIYFYINSTGTTWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP S+I++ Q
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQ 144
>gi|78212385|ref|YP_381164.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CC9605]
gi|78196844|gb|ABB34609.1| Endopeptidase Clp [Synechococcus sp. CC9605]
Length = 225
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 84/118 (71%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++++ EKPIY YINSTGT+ GE
Sbjct: 30 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYSGE 89
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP+S+I++ Q
Sbjct: 90 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPNSSIVLHQ 147
>gi|443315110|ref|ZP_21044620.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
gi|442785292|gb|ELR95122.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
Length = 230
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 86/119 (72%), Gaps = 11/119 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RI+YLG+ V + VT+LI+A+ L+LQ++D +KPIY YINSTGT+ G+
Sbjct: 32 KERIIYLGLPLVSADEYKRQLGVDVTKLIIAQLLFLQFDDPDKPIYFYINSTGTSWYTGD 91
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQA 209
+G ETEAFAI D MGYVKPPI T+C+G A G AA++L +G KG RA+LP +TI++ QA
Sbjct: 92 AIGQETEAFAICDTMGYVKPPIHTICIGQAMGTAAMILASGTKGFRASLPHATIVLNQA 150
>gi|224103735|ref|XP_002313173.1| predicted protein [Populus trichocarpa]
gi|222849581|gb|EEE87128.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Query: 90 EQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKG 148
E PPDL S L RI YLGM VP+VTEL++A+F+YL YED KPIYLYINS+GT +
Sbjct: 168 ESAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMYLDYEDPSKPIYLYINSSGTQNEK 227
Query: 149 GEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSST 203
E +G ETEA+AI D+M Y K I+T+ G A+G+AA+LL GAKG RA P+S+
Sbjct: 228 METVGSETEAYAIADIMSYCKSTIYTVNCGMAYGQAAMLLSLGAKGYRALQPNSS 282
>gi|78185115|ref|YP_377550.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CC9902]
gi|78169409|gb|ABB26506.1| Endopeptidase Clp [Synechococcus sp. CC9902]
Length = 223
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 83/118 (70%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ L+L+++D EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDDPEKPIYFYINSTGTSWYSGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP S+I++ Q
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQ 144
>gi|116072310|ref|ZP_01469577.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
gi|116064832|gb|EAU70591.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
Length = 222
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 83/118 (70%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ L+L+++D EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDDPEKPIYFYINSTGTSWYSGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP S+I++ Q
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQ 144
>gi|56751581|ref|YP_172282.1| ATP-dependent Clp protease-like protein [Synechococcus elongatus
PCC 6301]
gi|81301347|ref|YP_401555.1| ATP-dependent Clp protease-like protein [Synechococcus elongatus
PCC 7942]
gi|18203214|sp|Q9L4P4.1|CLPR_SYNE7 RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit-like; AltName: Full=Endopeptidase Clp-like
gi|7264063|emb|CAB81780.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|56686540|dbj|BAD79762.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81170228|gb|ABB58568.1| Endopeptidase Clp [Synechococcus elongatus PCC 7942]
Length = 228
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 83/118 (70%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RI+YLGM S VTELI+A+ LYL++++ EKPIY YINSTGT+ G+
Sbjct: 31 KERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGD 90
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+GYETEAFAI D M Y+KPP+ T+C+G A G AA++L G GNRA+LP +TI++ Q
Sbjct: 91 AIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSGGTPGNRASLPHATIVLNQ 148
>gi|126696837|ref|YP_001091723.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9301]
gi|126543880|gb|ABO18122.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
Length = 220
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 84/118 (71%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++ED EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFEDPEKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L +G KG+RAALP ++I++ Q
Sbjct: 87 AVGFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSSGTKGHRAALPHASIVLHQ 144
>gi|260434315|ref|ZP_05788285.1| Clp protease [Synechococcus sp. WH 8109]
gi|260412189|gb|EEX05485.1| Clp protease [Synechococcus sp. WH 8109]
Length = 225
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 83/118 (70%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++++ EKPIY YINSTGT+ G+
Sbjct: 30 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYSGD 89
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP S+I++ Q
Sbjct: 90 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQ 147
>gi|157413875|ref|YP_001484741.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9215]
gi|254526964|ref|ZP_05139016.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
gi|157388450|gb|ABV51155.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
gi|221538388|gb|EEE40841.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
Length = 220
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 83/118 (70%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++ED EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFEDPEKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L +G KG RAALP ++I++ Q
Sbjct: 87 AVGFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSSGTKGQRAALPHASIVLHQ 144
>gi|78779794|ref|YP_397906.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9312]
gi|123969044|ref|YP_001009902.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. AS9601]
gi|78713293|gb|ABB50470.1| Endopeptidase Clp [Prochlorococcus marinus str. MIT 9312]
gi|123199154|gb|ABM70795.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
Length = 220
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 83/118 (70%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++ED EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFEDPEKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L +G KG RAALP ++I++ Q
Sbjct: 87 AVGFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSSGTKGQRAALPHASIVLHQ 144
>gi|302795281|ref|XP_002979404.1| hypothetical protein SELMODRAFT_153292 [Selaginella moellendorffii]
gi|300153172|gb|EFJ19812.1| hypothetical protein SELMODRAFT_153292 [Selaginella moellendorffii]
Length = 243
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Query: 103 NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAI 161
+RIVY+GM VP+VTEL++AE LYLQY D PIY+YINSTGT++ GE +G ETE FAI
Sbjct: 30 SRIVYVGMPLVPAVTELVIAELLYLQYSDPTLPIYMYINSTGTSRADGETVGMETEGFAI 89
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+D M VK I T+ VG A G+A LLL AG KG R LP +T MI+Q
Sbjct: 90 HDTMQLVKNEIHTVGVGAAIGQACLLLAAGTKGKRYMLPHATAMIQQ 136
>gi|318040431|ref|ZP_07972387.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CB0101]
Length = 233
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 84/118 (71%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++++ EKPI+ YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIFFYINSTGTSWYSGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG+RAALP ++I++ Q
Sbjct: 87 AIGFETEAFAIADTIRYVKPPVHTICIGQAMGTAAMILSAGTKGHRAALPHASIVLHQ 144
>gi|33866182|ref|NP_897741.1| ATP-dependent Clp protease-like protein [Synechococcus sp. WH 8102]
gi|33639157|emb|CAE08163.1| ATP-dependent Clp protease proteolytic subunit 4 [Synechococcus sp.
WH 8102]
Length = 222
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 83/118 (70%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ L+L++++ EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDNPEKPIYFYINSTGTSWYSGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP S+I++ Q
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQ 144
>gi|33862588|ref|NP_894148.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9313]
gi|124023702|ref|YP_001018009.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9303]
gi|33634504|emb|CAE20490.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9313]
gi|123963988|gb|ABM78744.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9303]
Length = 223
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 84/118 (71%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++++ EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG+RAALP ++I++ Q
Sbjct: 87 AVGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGHRAALPHASIVLHQ 144
>gi|302817400|ref|XP_002990376.1| hypothetical protein SELMODRAFT_131372 [Selaginella moellendorffii]
gi|302825342|ref|XP_002994294.1| hypothetical protein SELMODRAFT_138455 [Selaginella moellendorffii]
gi|300137825|gb|EFJ04638.1| hypothetical protein SELMODRAFT_138455 [Selaginella moellendorffii]
gi|300141938|gb|EFJ08645.1| hypothetical protein SELMODRAFT_131372 [Selaginella moellendorffii]
Length = 235
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Query: 103 NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAI 161
+RIVY+GM VP+VTEL++AE LYLQY D PIY+YINSTGT++ GE +G ETE FAI
Sbjct: 22 SRIVYVGMPLVPAVTELVIAELLYLQYSDPTLPIYMYINSTGTSRADGETVGMETEGFAI 81
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+D M VK I T+ VG A G+A LLL AG KG R LP +T MI+Q
Sbjct: 82 HDTMQLVKNEIHTVGVGAAIGQACLLLAAGTKGKRYMLPHATAMIQQ 128
>gi|254431834|ref|ZP_05045537.1| Clp protease [Cyanobium sp. PCC 7001]
gi|197626287|gb|EDY38846.1| Clp protease [Cyanobium sp. PCC 7001]
Length = 232
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 83/118 (70%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++++ EKPI+ YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDEAKRQMGIDVTELIIAQLLYLEFDNPEKPIFFYINSTGTSWFTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP +TI++ Q
Sbjct: 87 AIGFETEAFAIADTIRYVKPPVHTICIGQAMGTAAMILSAGTKGQRAALPHATIVLHQ 144
>gi|123966707|ref|YP_001011788.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9515]
gi|123201073|gb|ABM72681.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
Length = 220
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 84/118 (71%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL+++D +KPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFDDPDKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + Y+KPPI T+C+G A G AA++L +G KG+RAALP ++I++ Q
Sbjct: 87 AVGFETEAFAICDTINYIKPPIHTICIGQAMGTAAVILSSGTKGHRAALPHASIVLHQ 144
>gi|317970580|ref|ZP_07971970.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CB0205]
Length = 225
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 84/118 (71%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++++ EKPI+ YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIFFYINSTGTSWYSGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG+RAALP ++I++ Q
Sbjct: 87 AIGFETEAFAIADTIRYVKPPVHTICIGQAMGTAAMILSAGTKGHRAALPHASIVLHQ 144
>gi|33861869|ref|NP_893430.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33640237|emb|CAE19772.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 220
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 84/118 (71%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL+++D +KPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFDDPDKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + Y+KPPI T+C+G A G AA++L +G KG+RAALP ++I++ Q
Sbjct: 87 AVGFETEAFAICDTINYIKPPIHTICIGQAMGTAAVILSSGTKGHRAALPHASIVLHQ 144
>gi|72382718|ref|YP_292073.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. NATL2A]
gi|72002568|gb|AAZ58370.1| endopeptidase Clp [Prochlorococcus marinus str. NATL2A]
Length = 224
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 83/118 (70%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ L+L++++ EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLFLEFDNSEKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP ++I++ Q
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHASIVLHQ 144
>gi|255542730|ref|XP_002512428.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223548389|gb|EEF49880.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 325
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 78/106 (73%), Gaps = 1/106 (0%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAIY 162
RIVY+GM VP+VTEL++AE +YLQ+ D ++PIYLYINSTGTT+ GE +G ETE FAIY
Sbjct: 123 RIVYIGMPLVPAVTELVVAELMYLQWMDPKEPIYLYINSTGTTRDDGETVGMETEGFAIY 182
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D M +K I T+ VG A G+A LLL AG KG R +P + MI+Q
Sbjct: 183 DSMMQLKNEIHTVAVGAAIGQACLLLAAGTKGKRFMMPHAKAMIQQ 228
>gi|33240836|ref|NP_875778.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
gi|33238365|gb|AAQ00431.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 221
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 84/118 (71%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ L+L++++ EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLFLEFDNPEKPIYFYINSTGTSWHTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + Y+KPPI T+C+G A G AA++L G+KG+RAALP ++I++ Q
Sbjct: 87 AIGFETEAFAICDTISYIKPPIHTICIGQAMGTAAVILSGGSKGHRAALPHASIVLHQ 144
>gi|302773329|ref|XP_002970082.1| hypothetical protein SELMODRAFT_65351 [Selaginella moellendorffii]
gi|300162593|gb|EFJ29206.1| hypothetical protein SELMODRAFT_65351 [Selaginella moellendorffii]
Length = 300
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RIVYLGM+ VP+VTELI+AE L+L +++ KPIYLYIN +GT + E
Sbjct: 113 PPDLPSLLLDARIVYLGMAIVPAVTELIVAEMLFLDFDNPSKPIYLYINCSGTQNEKKES 172
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSST 203
+G+ETEA+AI D M YVK ++T+ G A+G+AA+LL G KG RA PSS+
Sbjct: 173 VGFETEAYAIADTMSYVKSKVYTVNCGMAFGQAAMLLSVGEKGFRAVQPSSS 224
>gi|356572984|ref|XP_003554645.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Glycine max]
Length = 327
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAIY 162
RIVY+GM VP+VTEL++AE +YLQY D ++PIY+YINSTGTT+ GE +G ETE FAIY
Sbjct: 125 RIVYIGMPLVPAVTELVVAELMYLQYMDPKEPIYIYINSTGTTRDDGETVGMETEGFAIY 184
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D M +K I T+ VG+A G+A LLL AG+ G R +P + MI+Q
Sbjct: 185 DAMMQLKNEIHTVAVGSAIGQACLLLSAGSPGKRFMMPHAKAMIQQ 230
>gi|124026439|ref|YP_001015554.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. NATL1A]
gi|123961507|gb|ABM76290.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
Length = 224
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 83/118 (70%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ L+L++++ EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLFLEFDNSEKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP ++I++ Q
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHASIVLHQ 144
>gi|307108088|gb|EFN56329.1| hypothetical protein CHLNCDRAFT_144777 [Chlorella variabilis]
Length = 315
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 78/106 (73%), Gaps = 1/106 (0%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAIY 162
RIVYLGM VP+VTELI+AE LYLQY+D KP+YLYINSTGTT+ GE +G+ETE AIY
Sbjct: 100 RIVYLGMPLVPAVTELIIAEMLYLQYKDRTKPMYLYINSTGTTRADGETVGFETEGTAIY 159
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D M +VK + T+ VG A G++ +LL AG KG R L +T M+ Q
Sbjct: 160 DTMCFVKNEVHTVGVGVAIGQSCMLLSAGEKGKRFMLEHATAMLHQ 205
>gi|302807086|ref|XP_002985274.1| hypothetical protein SELMODRAFT_424284 [Selaginella moellendorffii]
gi|300147102|gb|EFJ13768.1| hypothetical protein SELMODRAFT_424284 [Selaginella moellendorffii]
Length = 357
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RIVYLGM+ VP+VTELI+AE L+L +++ KPIYLYIN +GT + E
Sbjct: 134 PPDLPSLLLDARIVYLGMAIVPAVTELIVAEMLFLDFDNPSKPIYLYINCSGTQNEKKES 193
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSST 203
+G+ETEA+AI D M YVK ++T+ G A+G+AA+LL G KG RA PSS+
Sbjct: 194 VGFETEAYAIADTMSYVKSKVYTVNCGMAFGQAAMLLSVGEKGFRAVQPSSS 245
>gi|427702648|ref|YP_007045870.1| protease subunit of ATP-dependent protease [Cyanobium gracile PCC
6307]
gi|427345816|gb|AFY28529.1| protease subunit of ATP-dependent protease [Cyanobium gracile PCC
6307]
Length = 223
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 83/118 (70%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTEL++A+ LYL++++ EKPI+ YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELVIAQLLYLEFDNPEKPIFFYINSTGTSWYSGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP ++I++ Q
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAMILSAGTKGQRAALPHASIVLHQ 144
>gi|87302966|ref|ZP_01085770.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
gi|87282462|gb|EAQ74421.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
Length = 224
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 85/118 (72%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VT+LI+A+ L+L++++ EKPI+ YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTQLIIAQLLFLEFDNPEKPIFFYINSTGTSWYSGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AGAKG+RAALP ++I++ Q
Sbjct: 87 AIGFETEAFAICDTIRYVKPPVHTICIGQAMGTAAMILSAGAKGHRAALPHASIVLHQ 144
>gi|411118655|ref|ZP_11391036.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
gi|410712379|gb|EKQ69885.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
Length = 228
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 83/118 (70%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RI+YLG+ V S VT+LI+A+ LYLQ+ D EKPI+ YINSTGT+ G+
Sbjct: 30 KERIIYLGLPLVSSDDFKRQLGVDVTKLIIAQLLYLQFNDPEKPIFFYINSTGTSWYTGD 89
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RA+LP +TI++ Q
Sbjct: 90 AIGQETEAFAICDTINYVKPPVHTICIGQAMGTAAMILSAGTKGFRASLPHATIVLNQ 147
>gi|148241695|ref|YP_001226852.1| ATP-dependent Clp protease-like protein [Synechococcus sp. RCC307]
gi|147850005|emb|CAK27499.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
Length = 224
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 85/118 (72%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++++ +KPI+ YINSTGT+ G+
Sbjct: 31 KERIVYLGLPLFSDDDAKRQMGVDVTELIIAQLLYLEFDNPDKPIFFYINSTGTSWYSGD 90
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AGAKG RA+LP+++I++ Q
Sbjct: 91 AIGFETEAFAICDTIRYVKPPVHTICIGQAMGTAAMILSAGAKGQRASLPNASIVLHQ 148
>gi|145350809|ref|XP_001419790.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144580022|gb|ABO98083.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 381
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI Y+GMS VP+VTEL++AE LYL YE EKP Y+YINS G+ + GE
Sbjct: 147 PPDLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPCYVYINSGGSLNEKGEV 206
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
+G + EA+AI D M Y++P I T+ VG G A+L+L AG KG R ALP I
Sbjct: 207 VGMDNEAYAILDTMRYIRPKIHTVAVGKCHGNASLILAAGDKGCRHALPHVQI 259
>gi|148240099|ref|YP_001225486.1| ATP-dependent Clp protease-like protein [Synechococcus sp. WH 7803]
gi|147848638|emb|CAK24189.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 223
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 83/118 (70%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++++ +KPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDTKRQVGIDVTELIIAQLLYLEFDNPDKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP ++I++ Q
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHASIVLHQ 144
>gi|159470091|ref|XP_001693193.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
gi|158277451|gb|EDP03219.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
Length = 276
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 87/124 (70%), Gaps = 5/124 (4%)
Query: 89 WEQ--PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
W++ PPPDLA+ L+ RI+YLGM SV EL+ A+ L++ ++ PI+ YINSTG
Sbjct: 36 WKEAGPPPDLATRLFSERIMYLGMPIDSSVAELLTAQ-LFVLVQEAPDPIFFYINSTGIA 94
Query: 147 KGGEKLGYETEAFAIYDVMGYVKP--PIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
K K G E EA A+Y +M V+ PI+TLCVGNA+GEAALLL AG+ G RAAL SSTI
Sbjct: 95 KSTTKFGNEHEAIAVYSMMKGVQKYCPIYTLCVGNAFGEAALLLSAGSPGKRAALRSSTI 154
Query: 205 MIKQ 208
M++Q
Sbjct: 155 MLRQ 158
>gi|159903902|ref|YP_001551246.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9211]
gi|159889078|gb|ABX09292.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
Length = 223
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 83/118 (70%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++++ +KP+Y YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIVAQLLYLEFDNPDKPVYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L AG KG RAALP S+I++ Q
Sbjct: 87 AIGFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQ 144
>gi|397592489|gb|EJK55685.1| hypothetical protein THAOC_24554 [Thalassiosira oceanica]
Length = 281
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFA 160
NRIVY+GM VP+VTEL++AE LYL YED KP+ +YINS+GTT G+ +G+ETEAFA
Sbjct: 65 HNRIVYIGMPLVPAVTELVIAELLYLNYEDQNKPVTMYINSSGTTTATGQPVGFETEAFA 124
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALP 200
I DVM Y++PP+ T+ +G A+G AA++L G KG + + P
Sbjct: 125 IADVMKYIRPPVNTVAIGQAFGAAAMILSQGQKGGQGSAP 164
>gi|148906385|gb|ABR16347.1| unknown [Picea sitchensis]
Length = 393
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI+YLGM VP+VTEL++AE ++L Y++ KPIY YINS GT + E
Sbjct: 171 PPDLPSLLLDARILYLGMPIVPAVTELLIAELMWLDYDNPSKPIYFYINSPGTQNEKHEP 230
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSST 203
+ +ETEA+AI D++ YVKP ++TL G A+G+A +LL G KG+RA +PSST
Sbjct: 231 IAFETEAYAIADMIAYVKPKVYTLNCGMAFGQAGMLLSLGTKGHRALMPSST 282
>gi|209527270|ref|ZP_03275781.1| Endopeptidase Clp [Arthrospira maxima CS-328]
gi|376003779|ref|ZP_09781582.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|423066151|ref|ZP_17054941.1| hypothetical protein SPLC1_S410490 [Arthrospira platensis C1]
gi|209492337|gb|EDZ92681.1| Endopeptidase Clp [Arthrospira maxima CS-328]
gi|375327810|emb|CCE17335.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|406712193|gb|EKD07382.1| hypothetical protein SPLC1_S410490 [Arthrospira platensis C1]
Length = 230
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 81/118 (68%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RI+YLG V S VT+LI+A+ LYLQ+ D EKPIY YINSTGT+ G+
Sbjct: 32 KERIIYLGSPLVSSDDYKRQLGVDVTKLIIAQLLYLQFSDPEKPIYFYINSTGTSWYTGD 91
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G +TEAFAI D M YVKPP+ T+C+G A G AA++L AG KG R +LP +TI++ Q
Sbjct: 92 AIGQDTEAFAICDTMSYVKPPVHTICIGQAMGTAAMILSAGTKGCRTSLPHATIVLNQ 149
>gi|384247124|gb|EIE20612.1| hypothetical protein COCSUDRAFT_10544, partial [Coccomyxa
subellipsoidea C-169]
Length = 228
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 85/121 (70%), Gaps = 1/121 (0%)
Query: 86 GTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT 145
G A Q PPDL S L RI Y+GM VP+VTELI++E L+L + EKP+Y+YI+S G+
Sbjct: 1 GAAPGQAPPDLPSLLLDGRICYIGMPLVPAVTELIISELLWLNFSYPEKPVYVYIHSIGS 60
Query: 146 -TKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
T G+ +G++TEA+AI D + Y++P I T+ VG A+G AA++L +G KG R ALP + I
Sbjct: 61 QTPDGQAVGFDTEAYAIIDTLNYIRPEIHTVVVGQAFGNAAMILASGKKGCRFALPHARI 120
Query: 205 M 205
M
Sbjct: 121 M 121
>gi|148910727|gb|ABR18430.1| unknown [Picea sitchensis]
Length = 393
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI+YLGM VP+VTEL++AE ++L Y++ KPIY YINS GT + E
Sbjct: 171 PPDLPSLLLDARILYLGMPIVPAVTELLIAELMWLDYDNPSKPIYFYINSPGTQNEKHEP 230
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSST 203
+ +ETEA+AI D++ YVKP ++TL G A+G+A +LL G KG+RA +PSST
Sbjct: 231 IAFETEAYAIADMIAYVKPKVYTLNCGMAFGQAGMLLSLGTKGHRALMPSST 282
>gi|225450774|ref|XP_002279451.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic [Vitis vinifera]
gi|296089701|emb|CBI39520.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 78/106 (73%), Gaps = 1/106 (0%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAIY 162
RIVY+GM VP+VTEL++AE +YLQ+ D ++P+Y+YIN TGTT+ GE++G ETE FAIY
Sbjct: 120 RIVYIGMPLVPAVTELVIAELMYLQWMDPKEPVYVYINCTGTTRDDGERVGMETEGFAIY 179
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D M +K I T+ VG A G+A LLL AG KG R +P + MI+Q
Sbjct: 180 DAMMQLKNEIHTVAVGAAIGQACLLLAAGTKGKRFMMPHAKAMIQQ 225
>gi|412990638|emb|CCO18010.1| predicted protein [Bathycoccus prasinos]
Length = 386
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 80/117 (68%), Gaps = 5/117 (4%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT---TKGG 149
PPDL S L RI Y+GMS VP+VTEL++AE LYL YE EKP YLYI+S G+ K G
Sbjct: 160 PPDLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPAYLYIHSAGSMGKDKDG 219
Query: 150 --EKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
E +G + EA+AI D M Y+KP I T+ VG +G AAL+L AG KG R ALP++ I
Sbjct: 220 RDEVVGVDNEAYAIIDTMRYIKPKIHTVAVGKTYGNAALILAAGDKGCRWALPNAQI 276
>gi|302837484|ref|XP_002950301.1| hypothetical protein VOLCADRAFT_120863 [Volvox carteri f.
nagariensis]
gi|300264306|gb|EFJ48502.1| hypothetical protein VOLCADRAFT_120863 [Volvox carteri f.
nagariensis]
Length = 298
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 86/124 (69%), Gaps = 5/124 (4%)
Query: 89 WEQ--PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
W++ PPPDLA+ L+ RI+YLGM SV EL+ A+ L++ ++ PI+ YINSTG
Sbjct: 58 WKEAGPPPDLATRLFTERIMYLGMPIDSSVAELLTAQ-LFVLVQEAPDPIFFYINSTGIA 116
Query: 147 KGGEKLGYETEAFAIYDVMGYVKP--PIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
K K G E EA A+Y +M V+ PI+TLCVGNA+GEAALLL AG G RAAL SSTI
Sbjct: 117 KSTTKFGNEHEAVAVYHMMKGVQKFCPIYTLCVGNAFGEAALLLSAGTPGKRAALRSSTI 176
Query: 205 MIKQ 208
M++Q
Sbjct: 177 MLRQ 180
>gi|168025572|ref|XP_001765308.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683627|gb|EDQ70036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 298
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFA 160
+RIVY+GM VP+VTEL++AE LYLQY D +PIY+YINSTGT++ GE +G ETE FA
Sbjct: 84 HSRIVYIGMPLVPAVTELVIAELLYLQYADPRQPIYVYINSTGTSRADGETVGLETEGFA 143
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
IYD + V+ I T+ VG A G+A LLL +G KG R +P +T MI+Q
Sbjct: 144 IYDTLMNVRNQIQTVAVGAAIGQACLLLASGDKGMRYMMPHATAMIQQ 191
>gi|434386911|ref|YP_007097522.1| protease subunit of ATP-dependent protease [Chamaesiphon minutus
PCC 6605]
gi|428017901|gb|AFY93995.1| protease subunit of ATP-dependent protease [Chamaesiphon minutus
PCC 6605]
Length = 223
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 84/118 (71%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPSV----------TELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVY+G V S T+L++A+ LYLQ+++ EKPIY YINSTGT+ G+
Sbjct: 26 KERIVYMGGPLVSSDDYKRQMGYDPTKLLIAQLLYLQFDNPEKPIYFYINSTGTSWYTGD 85
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G+ETEAFAI D +GY+KPP+ T+C+G A G AA++L AG KG RA+LP +TI++ Q
Sbjct: 86 SIGFETEAFAICDTLGYIKPPVHTICIGQAMGTAAMILAAGTKGCRASLPHATIVLNQ 143
>gi|308807867|ref|XP_003081244.1| ATP-dependent Clp protease proteolytic subunit 3 (ISS)
[Ostreococcus tauri]
gi|116059706|emb|CAL55413.1| ATP-dependent Clp protease proteolytic subunit 3 (ISS)
[Ostreococcus tauri]
Length = 335
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI Y+GMS VP+VTEL++AE LYL YE EKP Y+YINS G+ + GE
Sbjct: 101 PPDLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPCYVYINSGGSINEKGEV 160
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
+G + EA+AI D M Y++ PI T+ VG G A+L+L G KG R ALP I
Sbjct: 161 VGMDNEAYAILDTMRYIRSPIHTVAVGKCHGNASLILAGGDKGRRHALPHVQI 213
>gi|168013355|ref|XP_001759365.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689295|gb|EDQ75667.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Query: 103 NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAI 161
+RIVY+GM VP+VTEL++AE LYLQY D +PIY+YINSTGT + GE +G ETE FAI
Sbjct: 83 SRIVYIGMPLVPAVTELVIAELLYLQYADPRQPIYVYINSTGTARADGETVGLETEGFAI 142
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
YD + V+ I T+ VG A G+A LLL +G KG R +P +T MI+Q
Sbjct: 143 YDTLMNVRNQIQTVAVGAAIGQACLLLASGDKGMRYMMPHATAMIQQ 189
>gi|308800244|ref|XP_003074903.1| ClpP2 Clp protease proteolytic subunit, probable (IC) [Ostreococcus
tauri]
gi|119358826|emb|CAL52171.2| ClpP2 Clp protease proteolytic subunit, probable (IC) [Ostreococcus
tauri]
Length = 297
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAIY 162
RIVY+GM VP+VTELI++E LYLQY D +KP Y+YINSTG T+ GE +G+ETEA AIY
Sbjct: 97 RIVYIGMPLVPAVTELIVSELLYLQYADQKKPCYIYINSTGCTRADGEVVGFETEATAIY 156
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D M Y+ I+T+ G A G+A +LL AG KG R P +T M+ Q
Sbjct: 157 DTMKYIGNEIYTVGTGVAVGQACVLLSAGDKGKRFMTPHATAMLHQ 202
>gi|298491709|ref|YP_003721886.1| endopeptidase Clp ['Nostoc azollae' 0708]
gi|298233627|gb|ADI64763.1| Endopeptidase Clp ['Nostoc azollae' 0708]
Length = 229
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 84/118 (71%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLGM V + VT+LI+A+ LYL++++ EKPI+ YINSTGT+ G+
Sbjct: 32 KERIVYLGMPLVSADEYKRQIGVDVTKLIIAQLLYLKFDNPEKPIFFYINSTGTSWYTGD 91
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+GYETEAFAI D + Y+K P+ T+C+G A G AAL+L AG KG RA+LP +TI++ Q
Sbjct: 92 SIGYETEAFAICDTIDYIKTPVHTICIGQAIGTAALILSAGTKGFRASLPHATIVLNQ 149
>gi|168061571|ref|XP_001782761.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665734|gb|EDQ52408.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 87/125 (69%), Gaps = 4/125 (3%)
Query: 86 GTAWEQP---PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINS 142
G+A +P PPDL S L RI YLGM+ VP+VTELI+AE L+L +++ KPIY YINS
Sbjct: 158 GSAGGRPKTAPPDLPSLLLDARICYLGMAIVPAVTELIIAELLWLDFDNPTKPIYFYINS 217
Query: 143 TGT-TKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPS 201
+GT + E +G+ETEA+AI D + YVK ++T+ G A+G+AA+LL G KG RA PS
Sbjct: 218 SGTQNEKKESIGFETEAYAIADTIRYVKSKVYTINCGQAFGQAAMLLSLGEKGYRALQPS 277
Query: 202 STIMI 206
S+ +
Sbjct: 278 SSTKL 282
>gi|255639455|gb|ACU20022.1| unknown [Glycine max]
Length = 364
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI YLGM VP+VTELI+A+F++L Y++ KPIYLYINS+GT + E
Sbjct: 149 PPDLPSLLLDARICYLGMPIVPAVTELIVAQFMWLDYDNPSKPIYLYINSSGTLNEKNET 208
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSST 203
+G ETEA++I D+M YVK ++T+ G A+G+AA+LL G KG RA P+S+
Sbjct: 209 VGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRAVQPNSS 260
>gi|224125178|ref|XP_002319519.1| predicted protein [Populus trichocarpa]
gi|118486796|gb|ABK95233.1| unknown [Populus trichocarpa]
gi|222857895|gb|EEE95442.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 77/106 (72%), Gaps = 1/106 (0%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAIY 162
RIVY+GM V +VTEL++AE +YLQ+ D + PIY+YINSTGTT+ GE +G ETE FAIY
Sbjct: 139 RIVYIGMPLVAAVTELVVAELMYLQWMDPKAPIYIYINSTGTTRDDGESVGMETEGFAIY 198
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D M +K I T+ VG A G+A LLL AG KG+R +P + MI+Q
Sbjct: 199 DSMMQLKNEIHTVAVGAAIGQACLLLAAGTKGHRYMMPHAKAMIQQ 244
>gi|356536107|ref|XP_003536581.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Glycine max]
Length = 372
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI YLGM VP+VTELI+A+F++L Y++ KPIYLYINS+GT + E
Sbjct: 149 PPDLPSLLLDARICYLGMPIVPAVTELIVAQFMWLDYDNPSKPIYLYINSSGTLNEKNET 208
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSST 203
+G ETEA++I D+M YVK ++T+ G A+G+AA+LL G KG RA P+S+
Sbjct: 209 VGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRAVQPNSS 260
>gi|409990520|ref|ZP_11273883.1| ATP-dependent Clp protease-like protein [Arthrospira platensis str.
Paraca]
gi|409938617|gb|EKN79918.1| ATP-dependent Clp protease-like protein [Arthrospira platensis str.
Paraca]
Length = 202
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 82/120 (68%), Gaps = 11/120 (9%)
Query: 100 LYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KG 148
L K RI+YLG V S VT+LI+A+ LYLQ+ D EKPI+ YINSTGT+
Sbjct: 2 LLKERIIYLGSPLVSSDDYKRQLGVDVTKLIIAQLLYLQFSDPEKPIFFYINSTGTSWYT 61
Query: 149 GEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
G+ +G +TEAFAI D + YVKPP+ T+C+G A G AA++L AG KG R +LP +TI++ Q
Sbjct: 62 GDAIGQDTEAFAICDTINYVKPPVHTICIGQAMGTAAMILSAGTKGCRTSLPHATIVLNQ 121
>gi|168026989|ref|XP_001766013.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682656|gb|EDQ69072.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 87/125 (69%), Gaps = 4/125 (3%)
Query: 86 GTAWEQP---PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINS 142
G+A +P PPDL S L RI YLGM+ VP+VTELI+AE L+L +++ KPIY YINS
Sbjct: 115 GSAGGRPKTAPPDLPSLLLDARICYLGMAIVPAVTELIIAELLWLDFDNPSKPIYFYINS 174
Query: 143 TGT-TKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPS 201
+GT + E +G+ETEA+AI D + YVK ++T+ G A+G+AA+LL G KG RA PS
Sbjct: 175 SGTQNEKKESIGFETEAYAIADTIRYVKSKVYTINCGQAFGQAAMLLSIGEKGFRALQPS 234
Query: 202 STIMI 206
S+ +
Sbjct: 235 SSTKL 239
>gi|356575728|ref|XP_003555989.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Glycine max]
Length = 372
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI YLGM VP+VTELI+A+F++L Y++ KPIYLYINS+GT + E
Sbjct: 149 PPDLPSLLLDARICYLGMPIVPAVTELIVAQFMWLDYDNPTKPIYLYINSSGTLNEKNET 208
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
+G ETEA++I D+M YVK ++T+ G A+G+AA+LL G KG RA P+S+ +
Sbjct: 209 VGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRAVQPNSSTKL 263
>gi|86605370|ref|YP_474133.1| ATP-dependent Clp protease-like protein [Synechococcus sp.
JA-3-3Ab]
gi|86553912|gb|ABC98870.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. JA-3-3Ab]
Length = 210
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 90/130 (69%), Gaps = 10/130 (7%)
Query: 83 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVP----SVTELILAEFLYLQYEDVEKPIYL 138
+ G PPPDLAS L + RIVYLG+ +VT+LI+ + LYLQYED EKPI +
Sbjct: 7 YYGGAPVRTPPPDLASLLLQERIVYLGLPLAEEANANVTKLIVEQLLYLQYEDREKPIKM 66
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINSTGT Y+T AFAI D M Y+KPP+ T+C+GNA G AA+LL AGAKG RA+
Sbjct: 67 YINSTGT------YSYDTAAFAILDTMNYIKPPVHTICIGNAIGMAAMLLAAGAKGFRAS 120
Query: 199 LPSSTIMIKQ 208
LP++TI++ Q
Sbjct: 121 LPNATIVLHQ 130
>gi|86608098|ref|YP_476860.1| ATP-dependent Clp protease-like protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556640|gb|ABD01597.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 211
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 90/130 (69%), Gaps = 10/130 (7%)
Query: 83 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVP----SVTELILAEFLYLQYEDVEKPIYL 138
+ G PPPDLAS L + RIVYLG+ +VT+LI+ + LYLQYED EKPI +
Sbjct: 8 YYGGAPVRTPPPDLASLLLQERIVYLGLPLAEESNANVTKLIIEQLLYLQYEDREKPIKM 67
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINSTGT Y+T AFAI D M Y+KPP+ T+C+GNA G AA+LL AGAKG RA+
Sbjct: 68 YINSTGT------YNYDTAAFAILDTMNYIKPPVHTICIGNAIGMAAMLLAAGAKGFRAS 121
Query: 199 LPSSTIMIKQ 208
LP++TI++ Q
Sbjct: 122 LPNATIVLHQ 131
>gi|145343690|ref|XP_001416446.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144576671|gb|ABO94739.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 308
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAIY 162
RIVY+GM VP+VTELI++E LYLQY D +KP Y+YINSTG T+ GE +G+ETEA AI+
Sbjct: 108 RIVYIGMPLVPAVTELIVSELLYLQYTDQKKPCYIYINSTGCTRADGEVVGFETEATAIF 167
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D M Y+ I+T+ G A G+A +LL AG KG R P +T M+ Q
Sbjct: 168 DTMKYIGNEIYTVGTGVAIGQACMLLSAGDKGKRYMTPHATAMLHQ 213
>gi|291569212|dbj|BAI91484.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
Length = 230
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 81/118 (68%), Gaps = 11/118 (9%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RI+YLG V S VT+LI+A+ LYLQ+ D EKPI+ YINSTGT+ G+
Sbjct: 32 KERIIYLGSPLVSSDEYKRQLGVDVTKLIIAQLLYLQFSDPEKPIFFYINSTGTSWYTGD 91
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+G +TEAFAI D + YVKPP+ T+C+G A G AA++L AG KG R +LP +TI++ Q
Sbjct: 92 AIGQDTEAFAICDTINYVKPPVHTICIGQAMGTAAMILSAGTKGCRTSLPHATIVLNQ 149
>gi|255573147|ref|XP_002527503.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223533143|gb|EEF34901.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 308
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI YLGM VP+VTEL++A+F+YL Y+D KPIYLYINS+GT + E
Sbjct: 88 PPDLPSLLLDARICYLGMPIVPAVTELLVAQFMYLDYDDSSKPIYLYINSSGTQNEKMET 147
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSST 203
+G ETEA+AI D M Y K ++T+ G A+G+A +LL GAKG RA P+++
Sbjct: 148 VGSETEAYAIADAMFYCKSTVYTVNCGMAYGQAGMLLSLGAKGYRALQPNAS 199
>gi|226505068|ref|NP_001149025.1| LOC100282645 [Zea mays]
gi|195624074|gb|ACG33867.1| ATP-dependent Clp protease proteolytic subunit-like [Zea mays]
gi|414866760|tpg|DAA45317.1| TPA: ATP-dependent Clp protease proteolytic subunit isoform 1 [Zea
mays]
gi|414866761|tpg|DAA45318.1| TPA: ATP-dependent Clp protease proteolytic subunit isoform 2 [Zea
mays]
Length = 339
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 76/108 (70%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
RIVY+GM VP+VTELI+A+ +YL++ + ++P+Y+YINSTGT + GE +G E+E FA
Sbjct: 135 HGRIVYIGMPLVPAVTELIVAQLMYLEWMNSKEPVYIYINSTGTARDDGEPVGMESEGFA 194
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
IYD M +K I TLC+G A G A L+L AG KG R P + MI+Q
Sbjct: 195 IYDAMMRMKTEIHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKAMIQQ 242
>gi|108708097|gb|ABF95892.1| ATP-dependent Clp protease proteolytic subunit, putative, expressed
[Oryza sativa Japonica Group]
gi|218192812|gb|EEC75239.1| hypothetical protein OsI_11536 [Oryza sativa Indica Group]
gi|222624913|gb|EEE59045.1| hypothetical protein OsJ_10812 [Oryza sativa Japonica Group]
Length = 341
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 76/108 (70%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
RIVY+GM VP+VTEL++A+ +YL++ + ++P+Y+YINSTGT + GE +G E+E FA
Sbjct: 137 HGRIVYIGMPLVPAVTELVVAQLMYLEWMNSKEPVYIYINSTGTARDDGEPVGMESEGFA 196
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
IYD M +K I TLC+G A G A L+L AG KG R P + MI+Q
Sbjct: 197 IYDAMMRMKTEIHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKAMIQQ 244
>gi|224284163|gb|ACN39818.1| unknown [Picea sitchensis]
Length = 327
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
Query: 103 NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAI 161
+RI+++GM VP+VTEL++AEFLYLQ+ D +P Y+YINSTGT++ GE + ETE FAI
Sbjct: 114 SRIIFIGMPLVPAVTELVIAEFLYLQWLDPRQPTYVYINSTGTSREDGETVALETEGFAI 173
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
YD M +K I T+ G A G+A LLL AG KG R LP + ++++Q
Sbjct: 174 YDTMMQMKNEIHTVAFGAAVGQACLLLAAGKKGKRYMLPHAQVLLQQ 220
>gi|363807834|ref|NP_001241928.1| uncharacterized protein LOC100809485 [Glycine max]
gi|255635968|gb|ACU18330.1| unknown [Glycine max]
Length = 324
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAIY 162
RIVY+GM VP+VTEL++AE + LQY D ++ I++YINSTGTT+ GE +G ETE FAIY
Sbjct: 122 RIVYIGMPLVPAVTELVVAELMCLQYMDPKETIFIYINSTGTTRDDGETVGMETEGFAIY 181
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D M +K I T+ VG+A G+A LLL AG G R +P + MI+Q
Sbjct: 182 DAMMQLKNEIHTVAVGSAIGQACLLLSAGTPGKRFMMPHAKAMIQQ 227
>gi|449454073|ref|XP_004144780.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Cucumis sativus]
gi|449490882|ref|XP_004158737.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Cucumis sativus]
Length = 331
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAIY 162
RIVY+GM VP+VTEL++A+ +YLQ+ D ++P+YLYINSTGTT+ GE + E+E FAIY
Sbjct: 128 RIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIY 187
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D + K I T+ VG A G A LLL AG KG R ++P + MI+Q
Sbjct: 188 DALMQSKNEIHTVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQ 233
>gi|225428973|ref|XP_002264383.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic [Vitis vinifera]
gi|296083061|emb|CBI22465.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 79/112 (70%), Gaps = 1/112 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI YLGM VP+V EL++A+F++L +++ KPIYLYINSTGT + E
Sbjct: 167 PPDLPSLLLDARICYLGMPIVPAVAELLVAQFMWLDFDNPSKPIYLYINSTGTQNEKMET 226
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSST 203
+G ETEA+AI D M Y K ++T+ G A+G+AA+LL GAKG R P+++
Sbjct: 227 VGSETEAYAIADSMAYCKSDVYTVNCGTAYGQAAMLLSVGAKGYRGLQPNAS 278
>gi|297852688|ref|XP_002894225.1| hypothetical protein ARALYDRAFT_891918 [Arabidopsis lyrata subsp.
lyrata]
gi|297340067|gb|EFH70484.1| hypothetical protein ARALYDRAFT_891918 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI YLGM VP+VTEL++A+F++L Y++ KPIYLYINS GT + E
Sbjct: 169 PPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMET 228
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSST 203
+G ETEA+AI D + Y K ++T+ G A+G+AA+LL G KG RA P S+
Sbjct: 229 VGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSS 280
>gi|242035789|ref|XP_002465289.1| hypothetical protein SORBIDRAFT_01g035610 [Sorghum bicolor]
gi|241919143|gb|EER92287.1| hypothetical protein SORBIDRAFT_01g035610 [Sorghum bicolor]
Length = 339
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 75/108 (69%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
RIVY+GM VP+VTEL++A+ +YL++ + ++P+Y+YINSTGT + GE +G E+E FA
Sbjct: 135 HGRIVYIGMPLVPAVTELVVAQLMYLEWMNSKEPVYIYINSTGTARDDGEPVGMESEGFA 194
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
IYD M + I TLC+G A G A L+L AG KG R P + MI+Q
Sbjct: 195 IYDAMMRMNTEIHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKAMIQQ 242
>gi|224284192|gb|ACN39832.1| unknown [Picea sitchensis]
Length = 327
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
Query: 103 NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAI 161
+RI+++GM VP+VTEL++AEFLYLQ+ D +P Y+YINSTGT++ GE + ETE FAI
Sbjct: 114 SRIIFIGMPLVPAVTELVIAEFLYLQWLDPRQPTYVYINSTGTSREDGETVALETEGFAI 173
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
YD M +K + T+ G A G+A LLL AG KG R LP + ++++Q
Sbjct: 174 YDTMMQMKNEMHTVAFGAAVGQACLLLAAGKKGKRYMLPHAQVLLQQ 220
>gi|357112271|ref|XP_003557933.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Brachypodium distachyon]
Length = 338
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
RIVY+GM VP+VTELI+A+ +YL + + +P Y+YINSTGT + GE +G ETE FA
Sbjct: 134 HGRIVYIGMPLVPAVTELIVAQLMYLDWTNSSEPAYIYINSTGTARDDGEPVGMETEGFA 193
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
IYD M +K I TLC+G A G A L+L AG KG R P + +I+Q
Sbjct: 194 IYDAMMRMKTEIHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKALIQQ 241
>gi|18402863|ref|NP_564560.1| ATP-dependent Clp protease proteolytic subunit-related protein 1
[Arabidopsis thaliana]
gi|75315328|sp|Q9XJ35.1|CLPR1_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 1, chloroplastic; Short=ClpR1;
AltName: Full=nClpP5; Flags: Precursor
gi|8569101|gb|AAF76446.1|AC015445_13 Identical to nClpP5 from Arabidopsis thaliana gb|AB022330 and
contains prenyltransferase PF|00432 and CLP protease
PF|00574 domains. ESTs gb|H76908, gb|AA605567,
gb|T21932, gb|T22976 come from this gene [Arabidopsis
thaliana]
gi|5360595|dbj|BAA82069.1| nClpP5 [Arabidopsis thaliana]
gi|15010752|gb|AAK74035.1| At1g49970/F2J10_5 [Arabidopsis thaliana]
gi|23308343|gb|AAN18141.1| At1g49970/F2J10_5 [Arabidopsis thaliana]
gi|332194380|gb|AEE32501.1| ATP-dependent Clp protease proteolytic subunit-related protein 1
[Arabidopsis thaliana]
Length = 387
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI YLGM VP+VTEL++A+F++L Y++ KPIYLYINS GT + E
Sbjct: 169 PPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMET 228
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSST 203
+G ETEA+AI D + Y K ++T+ G A+G+AA+LL G KG RA P S+
Sbjct: 229 VGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSS 280
>gi|412990287|emb|CCO19605.1| ATP-dependent Clp protease-like protein [Bathycoccus prasinos]
Length = 296
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAIY 162
RIVY+GM VP+VTELI++E LY+QY D K YLYINSTG T+ GE +G+ETEA AIY
Sbjct: 98 RIVYIGMPLVPAVTELIVSELLYMQYTDPGKACYLYINSTGCTRADGEVVGFETEATAIY 157
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D M Y+ ++T+ G A G+A +LL AG KG R P +T M+ Q
Sbjct: 158 DTMKYIGNEVYTVGTGVAIGQACVLLSAGQKGKRFMTPHATAMLHQ 203
>gi|357444423|ref|XP_003592489.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|355481537|gb|AES62740.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
Length = 373
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L +RI YLGM VP+VTELILA+ ++L Y++ KP+Y+YINS+GT + E
Sbjct: 153 PPDLPSLLLDSRICYLGMPIVPAVTELILAQLMWLDYDNPAKPVYVYINSSGTQNEKNET 212
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
+G ET+A++I D++ ++K ++T+ + A+G+AA++L G KG RA LP S+ +
Sbjct: 213 VGSETDAYSIADMISHIKSDVYTVNLAMAYGQAAMILSLGKKGYRAVLPHSSAKV 267
>gi|388520115|gb|AFK48119.1| unknown [Medicago truncatula]
Length = 373
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L +RI YLGM VP+VTELILA+ ++L Y++ KP+Y+YINS+GT + E
Sbjct: 153 PPDLPSLLLDSRICYLGMPIVPAVTELILAQLMWLDYDNPAKPVYVYINSSGTQNEKNET 212
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
+G ET+A++I D++ ++K ++T+ + A+G+AA++L G KG RA LP S+ +
Sbjct: 213 VGSETDAYSIADMISHIKSDVYTVNLAMAYGQAAMILSLGKKGYRAVLPHSSAKV 267
>gi|326494016|dbj|BAJ85470.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326495362|dbj|BAJ85777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511045|dbj|BAJ91870.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 337
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
RIVY+GM VP+VTELI+A+ +YL + + +P Y+YINSTGT + GE +G ETE FA
Sbjct: 133 HGRIVYIGMPLVPAVTELIVAQLMYLDWMNSSEPAYIYINSTGTARDDGEPVGMETEGFA 192
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
IYD M +K + TLC+G A G A L+L AG KG R P + +I+Q
Sbjct: 193 IYDAMMRMKTEVHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKALIQQ 240
>gi|357511831|ref|XP_003626204.1| ATP-dependent Clp protease proteolytic subunit-related protein
[Medicago truncatula]
gi|217074128|gb|ACJ85424.1| unknown [Medicago truncatula]
gi|355501219|gb|AES82422.1| ATP-dependent Clp protease proteolytic subunit-related protein
[Medicago truncatula]
Length = 322
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 75/106 (70%), Gaps = 1/106 (0%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAIY 162
RIVY+GM VP+VTEL++AE ++LQ+ ++PIY+YINSTGTT+ GE + E+E FAIY
Sbjct: 119 RIVYIGMPLVPAVTELVIAELMFLQWMAPKEPIYIYINSTGTTRADGETVAMESEGFAIY 178
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D M +K I T+ +G A G+A LLL AG KG R P + MI+Q
Sbjct: 179 DAMMQMKTEINTVALGAAVGQACLLLSAGTKGRRYMTPHAKAMIQQ 224
>gi|255088111|ref|XP_002505978.1| predicted protein [Micromonas sp. RCC299]
gi|226521249|gb|ACO67236.1| predicted protein [Micromonas sp. RCC299]
Length = 223
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 88/139 (63%), Gaps = 9/139 (6%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKLGYETEAFAIY 162
RIVY+GM +P+VTEL++AE L+L YE V++P Y+YI+S G+ + GE +G ++EA+AI
Sbjct: 20 RIVYIGMPLLPAVTELVVAELLFLNYEQVDRPGYVYIHSPGSINEKGECVGVDSEAYAIL 79
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQAGDTGICLLKSSLT 222
D M Y++P I T+ VG +G AA+LL AG KG R ALP++ IM K + T
Sbjct: 80 DTMRYIRPKIHTVAVGKCFGNAAMLLAAGDKGCRHALPNAQIMTHPP--------KLNRT 131
Query: 223 WLNSVKLNVLILSLPICSQ 241
+ SV + + + +C
Sbjct: 132 FDTSVNVQIKANEIEVCED 150
>gi|303275766|ref|XP_003057177.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461529|gb|EEH58822.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 372
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKLGYETEAFAIY 162
RIVY+GM +P+VTEL++AE L+L YE E+P Y+YI+S G+ + GE +G +TEA+AI
Sbjct: 163 RIVYIGMPLLPAVTELVVAELLFLNYEQNERPGYMYIHSGGSINEKGEVVGIDTEAYAIL 222
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIM 205
D M Y+KP + T+ VG +G AA+LL AG G R ALP++ IM
Sbjct: 223 DTMRYIKPKMHTVAVGKCFGNAAMLLAAGHPGCRHALPNAQIM 265
>gi|115465787|ref|NP_001056493.1| Os05g0592100 [Oryza sativa Japonica Group]
gi|48475230|gb|AAT44299.1| unknown protein [Oryza sativa Japonica Group]
gi|113580044|dbj|BAF18407.1| Os05g0592100 [Oryza sativa Japonica Group]
gi|215701013|dbj|BAG92437.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632764|gb|EEE64896.1| hypothetical protein OsJ_19755 [Oryza sativa Japonica Group]
Length = 386
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 77/110 (70%), Gaps = 1/110 (0%)
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKL 152
PDL S L +RI++LGM VP+VTELI A+FL+L Y+D KPIYLYINSTGT + E +
Sbjct: 161 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 220
Query: 153 GYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSS 202
ET+AFAI D + K ++T+ + A+G+AA+LL G KG R LP+S
Sbjct: 221 ASETDAFAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNS 270
>gi|255070315|ref|XP_002507239.1| predicted protein [Micromonas sp. RCC299]
gi|226522514|gb|ACO68497.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 203
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAIY 162
RI+Y+GM VP+VTELI++E LY+QY D +P Y+YINSTG + GE +G+ETEA +IY
Sbjct: 30 RIIYIGMPLVPAVTELIVSELLYMQYTDPARPCYIYINSTGCQRADGEVVGFETEATSIY 89
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D M Y+ IFT+ G A G+A +LL AG KG R ++T M+ Q
Sbjct: 90 DTMKYIGNEIFTVGTGVAIGQACMLLSAGDKGKRFMTKNATAMLHQ 135
>gi|194706198|gb|ACF87183.1| unknown [Zea mays]
Length = 301
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 77/110 (70%), Gaps = 1/110 (0%)
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKL 152
PDL S L +RI++LGM VP+VTELI A+FL+L Y+D KPIYLYINSTGT + E +
Sbjct: 76 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 135
Query: 153 GYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSS 202
ET+A+AI D + K ++T+ + A+G+AA+LL G KG R LP+S
Sbjct: 136 ASETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNS 185
>gi|449438329|ref|XP_004136941.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Cucumis sativus]
Length = 381
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKL-G 153
DL + L RI+YLGM VP+VTELI+A+F++L Y++ KPIYLYINS+GT +L G
Sbjct: 158 DLPTLLLDARIIYLGMPIVPAVTELIVAQFMWLDYDNPTKPIYLYINSSGTQDENRELVG 217
Query: 154 YETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSST 203
ETEA+AI D+M Y K ++T+ + A+G+AA+LL G KG RA P+++
Sbjct: 218 SETEAYAIADMMSYCKSDVYTINLAMAYGQAAMLLSLGTKGYRALQPNAS 267
>gi|388518383|gb|AFK47253.1| unknown [Medicago truncatula]
Length = 322
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAIY 162
RIVY+G VP+VTEL++AE ++LQ+ ++PIY+YINSTGTT+ GE + E+E FAIY
Sbjct: 119 RIVYIGTPLVPAVTELVIAELMFLQWMAPKEPIYIYINSTGTTRADGETVAMESEGFAIY 178
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
D M +K I T+ +G A G+A LLL AG KG R P + MI+Q
Sbjct: 179 DAMMQMKTEINTVALGAAVGQACLLLSAGTKGRRYMTPHAKAMIQQ 224
>gi|449478766|ref|XP_004155413.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Cucumis sativus]
Length = 381
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKL-G 153
DL + L RI+YLGM VP+VTELI+A+F++L Y++ KPIYLYINS+GT +L G
Sbjct: 158 DLPTLLLDARIIYLGMPIVPAVTELIVAQFMWLDYDNPTKPIYLYINSSGTQDENRELVG 217
Query: 154 YETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSST 203
ETEA+AI D+M Y K ++T+ + A+G+AA+LL G KG RA P+++
Sbjct: 218 SETEAYAIADMMSYCKSDVYTINLAMAYGQAAMLLSLGTKGYRALQPNAS 267
>gi|226529349|ref|NP_001141859.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|194689706|gb|ACF78937.1| unknown [Zea mays]
gi|413946719|gb|AFW79368.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 388
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 77/110 (70%), Gaps = 1/110 (0%)
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKL 152
PDL S L +RI++LGM VP+VTELI A+FL+L Y+D KPIYLYINSTGT + E +
Sbjct: 163 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 222
Query: 153 GYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSS 202
ET+A+AI D + K ++T+ + A+G+AA+LL G KG R LP+S
Sbjct: 223 ASETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNS 272
>gi|195650193|gb|ACG44564.1| endopeptidase Clp [Zea mays]
Length = 388
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 77/110 (70%), Gaps = 1/110 (0%)
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKL 152
PDL S L +RI++LGM VP+VTELI A+FL+L Y+D KPIYLYINSTGT + E +
Sbjct: 163 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 222
Query: 153 GYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSS 202
ET+A+AI D + K ++T+ + A+G+AA+LL G KG R LP+S
Sbjct: 223 ASETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNS 272
>gi|242091575|ref|XP_002441620.1| hypothetical protein SORBIDRAFT_09g030550 [Sorghum bicolor]
gi|241946905|gb|EES20050.1| hypothetical protein SORBIDRAFT_09g030550 [Sorghum bicolor]
Length = 388
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 77/110 (70%), Gaps = 1/110 (0%)
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKL 152
PDL S L +RI++LGM VP+VTELI A+FL+L Y+D KPIYLYINSTGT + E +
Sbjct: 163 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 222
Query: 153 GYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSS 202
ET+A+AI D + K ++T+ + A+G+AA+LL G KG R LP+S
Sbjct: 223 ASETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNS 272
>gi|326505514|dbj|BAJ95428.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 77/110 (70%), Gaps = 1/110 (0%)
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKL 152
PDL S L +RI++LGM VP+VTELI A+FL+L Y+D KPIYLYINSTGT + E +
Sbjct: 162 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 221
Query: 153 GYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSS 202
ET+A+AI D + K ++T+ + A+G+AA+LL G KG R LP+S
Sbjct: 222 ASETDAYAIADFINRSKAKVYTINLSMAYGQAAMLLSLGMKGKRGVLPNS 271
>gi|357132342|ref|XP_003567789.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Brachypodium distachyon]
Length = 390
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 77/110 (70%), Gaps = 1/110 (0%)
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKL 152
PDL S L +RI++LGM VP+VTELI A+FL+L Y+D KPIYLYINSTGT + E +
Sbjct: 165 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 224
Query: 153 GYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSS 202
ET+A+AI D + K ++T+ + A+G+AA+LL G KG R LP+S
Sbjct: 225 ASETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGMKGKRGVLPNS 274
>gi|218197363|gb|EEC79790.1| hypothetical protein OsI_21214 [Oryza sativa Indica Group]
Length = 386
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKL- 152
PDL S L +RI++LGM VP+VTELI A+FL+L Y+D KPIYLYINSTGT L
Sbjct: 161 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNGLV 220
Query: 153 GYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSS 202
ET+AFAI D + K ++T+ + A+G+AA+LL G KG R LP+S
Sbjct: 221 ASETDAFAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNS 270
>gi|297182365|gb|ADI18531.1| protease subunit of ATP-dependent clp proteases [uncultured SAR406
cluster bacterium HF4000_22B16]
Length = 202
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 81/139 (58%), Gaps = 8/139 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+K ++ + ++ T + D+ S L K RIV+LG S++ LI+A+FL+L+
Sbjct: 2 AKHQNEIAQLIPMVVEQTGRTERAYDIYSRLLKERIVFLGTPIDDSISSLIIAQFLFLEA 61
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
ED +K IYLYINS G GY T AI+D M Y+KP + T+C+G A A LL
Sbjct: 62 EDPDKDIYLYINSPG--------GYITAGMAIFDTMNYIKPDVATICMGQASSMGAFLLA 113
Query: 190 AGAKGNRAALPSSTIMIKQ 208
G KG R+ALP+S IMI Q
Sbjct: 114 GGKKGKRSALPNSRIMIHQ 132
>gi|167038050|ref|YP_001665628.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167040915|ref|YP_001663900.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
sp. X514]
gi|256752437|ref|ZP_05493296.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus CCSD1]
gi|300914951|ref|ZP_07132267.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X561]
gi|307723815|ref|YP_003903566.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X513]
gi|320116459|ref|YP_004186618.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|226706551|sp|B0KBA4.1|CLPP_THEP3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706552|sp|B0K533.1|CLPP_THEPX RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166855155|gb|ABY93564.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X514]
gi|166856884|gb|ABY95292.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256748706|gb|EEU61751.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus CCSD1]
gi|300889886|gb|EFK85032.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X561]
gi|307580876|gb|ADN54275.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X513]
gi|319929550|gb|ADV80235.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 195
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD M Y+KP + TLCVG A AA LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQ 124
>gi|345017119|ref|YP_004819472.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
wiegelii Rt8.B1]
gi|344032462|gb|AEM78188.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 195
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD M Y+KP + TLCVG A AA LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQ 124
>gi|289577854|ref|YP_003476481.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermoanaerobacter italicus Ab9]
gi|297544142|ref|YP_003676444.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|289527567|gb|ADD01919.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter italicus Ab9]
gi|296841917|gb|ADH60433.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 195
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD M Y+KP + TLCVG A AA LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQ 124
>gi|326391008|ref|ZP_08212557.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus JW 200]
gi|392940442|ref|ZP_10306086.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter siderophilus SR4]
gi|325992953|gb|EGD51396.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus JW 200]
gi|392292192|gb|EIW00636.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter siderophilus SR4]
Length = 195
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD M Y+KP + TLCVG A AA LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQ 124
>gi|225850859|ref|YP_002731093.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella
marina EX-H1]
gi|225644930|gb|ACO03116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella
marina EX-H1]
Length = 202
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 80/144 (55%), Gaps = 17/144 (11%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEF 124
SK +++ ++P EQ P D+ S L K+RI+ LG + LI+A+
Sbjct: 2 SKDLDSIVSQLVPIV----IEQTPRGERAYDIYSRLLKDRIIMLGFPIDDHIANLIIAQL 57
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ ED EK IY+YINS G G T AIYD M Y+KP + T+C+G A
Sbjct: 58 LFLESEDPEKDIYMYINSPG--------GVVTSGLAIYDTMRYIKPDVVTICMGQAASMG 109
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R ALPSS IMI Q
Sbjct: 110 AFLLSAGAKGKRYALPSSRIMIHQ 133
>gi|115452971|ref|NP_001050086.1| Os03g0344900 [Oryza sativa Japonica Group]
gi|113548557|dbj|BAF12000.1| Os03g0344900 [Oryza sativa Japonica Group]
Length = 349
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 72/103 (69%), Gaps = 4/103 (3%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAIY 162
RIVY+GM VP+VTEL++A+ +YL++ + ++P+Y+YINSTGT + GE +G E+E FAIY
Sbjct: 139 RIVYIGMPLVPAVTELVVAQLMYLEWMNSKEPVYIYINSTGTARDDGEPVGMESEGFAIY 198
Query: 163 DVMGYVKPP---IFTLCVGNAWGEAALLLGAGAKGNRAALPSS 202
D M +K I TLC+G A G A L+L AG KG R P +
Sbjct: 199 DAMMRMKTEKIRIHTLCIGAAAGHACLVLAAGKKGKRYMFPHA 241
>gi|194476565|ref|YP_002048744.1| ATP-dependent Clp protease proteolytic subunit [Paulinella
chromatophora]
gi|171191572|gb|ACB42534.1| ATP-dependent Clp protease proteolytic subunit [Paulinella
chromatophora]
Length = 219
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 103/177 (58%), Gaps = 19/177 (10%)
Query: 91 QPPPDLASYLYKNRIVYLGMSFVP------------SVTELILAEFLYLQYEDVEKPIYL 138
+ DLAS L RI+YLGM+ +VT+L++A+ L L++E I +
Sbjct: 21 ESMSDLASILLSERIIYLGMALASDDETRQSFSLGMNVTQLMIAQLLCLEFES-NSAITI 79
Query: 139 YINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
YINSTG+T +G+ETEAFAIYD + +++ P+ T CVG A G A +LL GA G RA
Sbjct: 80 YINSTGSTDINSNAIGHETEAFAIYDTIRFIESPVHTFCVGVAMGTATMLLACGASGCRA 139
Query: 198 ALPSSTIMIKQAGDTGICLLKSSLTWLNSVKLNVLILSLPICSQLGGLKVKQQMSKL 254
+LP+++I++ Q + + S T +N +++ L+LS I ++ + + + + ++
Sbjct: 140 SLPNASIILNQPYN----YVGGSSTDIN-IQVEQLLLSRSIMHEILSIHIGKSLQQI 191
>gi|428671728|gb|EKX72643.1| conserved hypothetical protein [Babesia equi]
Length = 199
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%), Gaps = 4/131 (3%)
Query: 79 MVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
M+I FT A E+ PPDL S L RIV++G+ P+V L++++ LYL Y+ EKPI +
Sbjct: 1 MLILFT---ARERKPPDLNSLLLSERIVFIGLPIQPTVAHLVISQLLYLDYDSAEKPIKI 57
Query: 139 YINSTGTTKGGEKLGY-ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
YIN+ + +L E A I DVM Y+K I TL +G A+G AA++LG+G G R
Sbjct: 58 YINTDDSITDNNELSVSEIGALNIVDVMNYLKNDIITLNLGKAYGPAAVILGSGTPGKRF 117
Query: 198 ALPSSTIMIKQ 208
LP S +++Q
Sbjct: 118 VLPRSYTVLRQ 128
>gi|317050717|ref|YP_004111833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
gi|316945801|gb|ADU65277.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
Length = 196
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 73/122 (59%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K+RIV+LG ++ +I+A+ L+L+ ED EK I+LYINS G
Sbjct: 11 TARGERSYDIYSRLLKDRIVFLGTQIDDQISNVIIAQLLFLEAEDPEKDIFLYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M Y++P + T+CVG A A+LL AG KG R ALP S IMI
Sbjct: 69 ------GVVTAGMAIYDTMQYIRPKVSTICVGQAASMGAVLLAAGEKGKRFALPHSRIMI 122
Query: 207 KQ 208
Q
Sbjct: 123 HQ 124
>gi|20807119|ref|NP_622290.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
tengcongensis MB4]
gi|20515613|gb|AAM23894.1| Protease subunit of ATP-dependent Clp proteases [Thermoanaerobacter
tengcongensis MB4]
Length = 198
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 22 DIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPG--------GS 73
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + TLCVG A AA LL AGAKG R ALP+S IMI Q
Sbjct: 74 ITAGLAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQ 127
>gi|397905705|ref|ZP_10506547.1| ATP-dependent Clp protease proteolytic subunit [Caloramator
australicus RC3]
gi|397161224|emb|CCJ33882.1| ATP-dependent Clp protease proteolytic subunit [Caloramator
australicus RC3]
Length = 196
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 73/122 (59%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K RI++LG L++A+ L+L+ ED +K IYLYINS G
Sbjct: 11 TARGERSYDIYSRLLKERIIFLGDEINDQTANLVIAQLLFLESEDPDKDIYLYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G + AIYD M Y+KP + T+CVG A AA+LL AGAKG R ALP+S IMI
Sbjct: 69 ------GVISAGLAIYDTMQYIKPDVSTICVGMAASMAAVLLAAGAKGKRFALPNSEIMI 122
Query: 207 KQ 208
Q
Sbjct: 123 HQ 124
>gi|60416366|sp|Q8RC25.2|CLPP_THETN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 195
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + TLCVG A AA LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGLAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQ 124
>gi|319789118|ref|YP_004150751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovibrio
ammonificans HB-1]
gi|317113620|gb|ADU96110.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovibrio
ammonificans HB-1]
Length = 200
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 24 DIYSRLLKDRIVMLGTPIDDHVANLIVAQLLFLEAEDPEKDIYLYINSPG--------GV 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A+LL AGAKG R ALP + IMI Q
Sbjct: 76 VTAGLAIYDTMQYIKPDVVTICMGQAASMGAVLLAAGAKGKRFALPHARIMIHQ 129
>gi|225848210|ref|YP_002728373.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225644423|gb|ACN99473.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 202
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V LI+A+ L+L+ ED EK IY+YINS G G
Sbjct: 24 DIYSRLLKDRIILLGTPIDDHVANLIVAQLLFLEAEDPEKDIYMYINSPG--------GV 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD M Y+KP + T+C+G A A LL AGAKG R +LP++ IMI Q
Sbjct: 76 VTAGFAIYDTMNYIKPDVVTICIGQAASMGAFLLSAGAKGKRYSLPNARIMIHQ 129
>gi|291278625|ref|YP_003495460.1| ATP-dependent Clp protease proteolytic subunit [Deferribacter
desulfuricans SSM1]
gi|290753327|dbj|BAI79704.1| ATP-dependent Clp protease, proteolytic subunit [Deferribacter
desulfuricans SSM1]
Length = 195
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 74/114 (64%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + +V +++A+ L+L+ ED +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGTAIDDNVANVVIAQMLFLEAEDPDKDIYLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A AA+LL +GAKG R ALP++ IMI Q
Sbjct: 72 ITSGLAIYDTMNYIKPDVSTICIGQAASMAAVLLSSGAKGKRFALPNARIMIHQ 125
>gi|253577702|ref|ZP_04855005.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
gi|251842907|gb|EES70953.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
Length = 196
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 78/133 (58%), Gaps = 9/133 (6%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ VIP+ T + D+ S L K+RIV+LG + V I+A+ L+L ED EK
Sbjct: 1 MSSVIPYVIEQTGRGERSYDIYSRLLKDRIVFLGSAIDDQVANSIMAQMLFLAAEDPEKD 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IY YINS G G + FAIYD M YVKP + T+C G A AA+LL AGAKG
Sbjct: 61 IYFYINSPG--------GSTSAGFAIYDTMQYVKPDVQTICSGMAASFAAILLMAGAKGK 112
Query: 196 RAALPSSTIMIKQ 208
R ALP+S IMI Q
Sbjct: 113 RFALPNSEIMIHQ 125
>gi|383784111|ref|YP_005468680.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
ferrooxidans C2-3]
gi|383083023|dbj|BAM06550.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
ferrooxidans C2-3]
Length = 200
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 76/131 (58%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M+IP T+ + D+ S L K RI++LG +V L++A+ L+L+ ED K I
Sbjct: 1 MLIPMVVEHTSRGERSYDIYSRLLKERIIFLGTPIDDNVANLVIAQLLFLESEDASKDIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
+YINS G G T FAIYD M Y+KP + T+CVG A A LL AGAKG R
Sbjct: 61 IYINSPG--------GVVTAGFAIYDTMQYIKPDVSTICVGQAASMGAFLLAAGAKGKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP++ +MI Q
Sbjct: 113 ALPNARVMIHQ 123
>gi|383754373|ref|YP_005433276.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366425|dbj|BAL83253.1| putative ATP-dependent Clp protease proteolytic subunit
[Selenomonas ruminantium subsp. lactilytica TAM6421]
Length = 203
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG SV +++A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGGQIDDSVANVVVAQMLFLESEDPDKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A+LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGLAIYDTMQYIKPDVSTICIGQAASMGAVLLTAGAKGKRFALPNARVMIHQ 124
>gi|408417896|ref|YP_006759310.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacula
toluolica Tol2]
gi|405105109|emb|CCK78606.1| ClpP: ATP-dependent Clp protease, proteolytic subunit
[Desulfobacula toluolica Tol2]
Length = 207
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 79/134 (58%), Gaps = 11/134 (8%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P+I MV+ ++ + D+ S L K+RI+++G + + LI+A+FL+L+ ED EK
Sbjct: 2 PLIPMVVEQSN---RGERAYDIYSRLLKDRIIFIGSAIDDEIANLIVAQFLFLESEDPEK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I YINS G G T AIYD M Y+KP + T+C+G A ALLL AG KG
Sbjct: 59 DISFYINSPG--------GVVTAGMAIYDTMQYIKPDVATVCIGQAASMGALLLTAGTKG 110
Query: 195 NRAALPSSTIMIKQ 208
R ALP+S IMI Q
Sbjct: 111 KRFALPNSRIMIHQ 124
>gi|325294216|ref|YP_004280730.1| ATP-dependent Clp protease proteolytic subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064664|gb|ADY72671.1| ATP-dependent Clp protease proteolytic subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 200
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 24 DIYSRLLKDRIIMLGTPIDDHVANLIVAQLLFLEAEDPEKDIYLYINSPG--------GV 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A+LL AGAKG R ALP + IMI Q
Sbjct: 76 VTAGLAIYDTMQYIKPDVVTICLGQAASMGAVLLAAGAKGKRFALPHARIMIHQ 129
>gi|374339257|ref|YP_005095993.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinitoga
piezophila KA3]
gi|372100791|gb|AEX84695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinitoga
piezophila KA3]
Length = 198
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V+ LI+A+ L+L+ +D EK IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGSEVNDYVSNLIVAQMLFLEAQDPEKDIYLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A+LL AGAKG R ALP+S IMI Q
Sbjct: 72 ITAGLAIYDTMQYIKPDVSTICIGQAASMGAVLLTAGAKGKRFALPNSRIMIHQ 125
>gi|302871325|ref|YP_003839961.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor obsidiansis OB47]
gi|302574184|gb|ADL41975.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor obsidiansis OB47]
Length = 195
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV L + LI+A+ L+L+ ED +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI Q
Sbjct: 72 VTAGFAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQ 125
>gi|312128165|ref|YP_003993039.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor hydrothermalis 108]
gi|312134617|ref|YP_004001955.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor owensensis OL]
gi|312792981|ref|YP_004025904.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|344996808|ref|YP_004799151.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor lactoaceticus 6A]
gi|311774668|gb|ADQ04155.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor owensensis OL]
gi|311778184|gb|ADQ07670.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor hydrothermalis 108]
gi|312180121|gb|ADQ40291.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|343965027|gb|AEM74174.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor lactoaceticus 6A]
Length = 195
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV L + LI+A+ L+L+ ED +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI Q
Sbjct: 72 VTAGFAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQ 125
>gi|224367556|ref|YP_002601719.1| protein ClpP1 [Desulfobacterium autotrophicum HRM2]
gi|259585947|sp|C0QGT0.1|CLPP_DESAH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|223690272|gb|ACN13555.1| ClpP1 [Desulfobacterium autotrophicum HRM2]
Length = 205
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 79/134 (58%), Gaps = 11/134 (8%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P+I MV+ ++ + D+ S L K+RI++LG + V LI+A+ L+L+ ED EK
Sbjct: 2 PLIPMVVEQSN---RGERAYDIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPEK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I YINS G G T A+YD M Y+KP + T+C+G A ALLL AGAKG
Sbjct: 59 DINFYINSPG--------GVVTAGMAVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKG 110
Query: 195 NRAALPSSTIMIKQ 208
R +LP+S IMI Q
Sbjct: 111 KRFSLPNSRIMIHQ 124
>gi|257460311|ref|ZP_05625414.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
gracilis RM3268]
gi|257442376|gb|EEV17516.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
gracilis RM3268]
Length = 194
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 76/131 (58%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
MVIP+ T+ + D+ S L K+RIV L +V I+A+ L+L+ ED +K IY
Sbjct: 1 MVIPYVIEQTSRGERSYDIYSRLLKDRIVMLSGEIDDAVASSIVAQLLFLEAEDPDKDIY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T F+IYD M Y+KP + T+C+G A A LL GAKG R
Sbjct: 61 LYINSPG--------GVVTSGFSIYDTMNYIKPDVSTICIGQAASMGAFLLSCGAKGKRY 112
Query: 198 ALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 113 ALPNSRIMIHQ 123
>gi|398814906|ref|ZP_10573583.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
gi|398035724|gb|EJL28955.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
Length = 200
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V +++A+ L+LQ ED EK I+LYINS G G
Sbjct: 21 DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AGAKG R ALP+S +MI Q
Sbjct: 73 ITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQ 126
>gi|226314841|ref|YP_002774737.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226097791|dbj|BAH46233.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 198
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V +++A+ L+LQ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AGAKG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQ 124
>gi|399050842|ref|ZP_10740886.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|433542108|ref|ZP_20498542.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
gi|398051558|gb|EJL43880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|432186623|gb|ELK44090.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
Length = 193
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M+IP T+ + D+ S L K+RI+ LG V L++A+ L+LQ ED EK I
Sbjct: 1 MLIPMVIEQTSRGERSYDIYSRLLKDRIILLGTEIDDEVANLVVAQLLFLQAEDPEKDIS 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+KP + T+CVG A A LL AGAKG R
Sbjct: 61 LYINSPG--------GSVTAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP+S +MI Q
Sbjct: 113 ALPNSEVMIHQ 123
>gi|222528715|ref|YP_002572597.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor bescii DSM 6725]
gi|312622971|ref|YP_004024584.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor kronotskyensis 2002]
gi|222455562|gb|ACM59824.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor bescii DSM 6725]
gi|312203438|gb|ADQ46765.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor kronotskyensis 2002]
Length = 195
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV L + LI+A+ L+L+ ED +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI Q
Sbjct: 72 VTAGFAIYDTMQYIKPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQ 125
>gi|410479152|ref|YP_006766789.1| peptidase S14, ClpP [Leptospirillum ferriphilum ML-04]
gi|424867689|ref|ZP_18291469.1| Peptidase S14, ClpP [Leptospirillum sp. Group II 'C75']
gi|124514481|gb|EAY55994.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
rubarum]
gi|387221743|gb|EIJ76256.1| Peptidase S14, ClpP [Leptospirillum sp. Group II 'C75']
gi|406774404|gb|AFS53829.1| peptidase S14, ClpP [Leptospirillum ferriphilum ML-04]
Length = 203
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 76/131 (58%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M+IP+ T + D+ S L K+RI++LG + V L++A+ L+L+ ED K I
Sbjct: 1 MLIPYVVEQTTRGERSYDIYSRLLKDRIIFLGTAIDDMVANLVIAQLLFLEAEDASKDIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+KP + T+CVG A A+LL AGA G R
Sbjct: 61 LYINSPG--------GVVTAGLAIYDTMQYIKPDVSTICVGQAASMGAVLLAAGADGKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP++ IMI Q
Sbjct: 113 ALPNARIMIHQ 123
>gi|317486004|ref|ZP_07944859.1| Clp protease [Bilophila wadsworthia 3_1_6]
gi|345887722|ref|ZP_08838886.1| ATP-dependent Clp protease proteolytic subunit [Bilophila sp.
4_1_30]
gi|316922777|gb|EFV44008.1| Clp protease [Bilophila wadsworthia 3_1_6]
gi|345041509|gb|EGW45656.1| ATP-dependent Clp protease proteolytic subunit [Bilophila sp.
4_1_30]
Length = 207
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 76/134 (56%), Gaps = 9/134 (6%)
Query: 76 VITMVIPFTSGTAWE-QPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
++ M +P T+ + D+ S L K+RIV LG +V LI A+ L+L+ +D EK
Sbjct: 4 ILDMTVPIVVETSGRTERAYDIFSRLLKDRIVLLGSEVNDAVASLICAQLLFLESQDPEK 63
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
IYLYINS G G T AIYD M Y+ PPI T+C+G A A LL AG KG
Sbjct: 64 EIYLYINSPG--------GSVTAGMAIYDTMNYITPPIATVCMGRAASMGAFLLSAGQKG 115
Query: 195 NRAALPSSTIMIKQ 208
R ALP+S +MI Q
Sbjct: 116 MRYALPNSQVMIHQ 129
>gi|206901598|ref|YP_002250810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
thermophilum H-6-12]
gi|206740701|gb|ACI19759.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
thermophilum H-6-12]
Length = 194
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 78/135 (57%), Gaps = 17/135 (12%)
Query: 79 MVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
M++P EQ P D+ S L K+RIV+LG + V L++A+ L+L+ ED E
Sbjct: 1 MLVPIV----IEQTPRGERAYDIYSRLLKSRIVFLGTAINDEVANLVVAQLLFLESEDPE 56
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
K IYLYINS G G + AIYD M ++KP + T+CVG A AA+LL AG K
Sbjct: 57 KDIYLYINSPG--------GEVSAGLAIYDTMRHIKPKVATVCVGQAASMAAILLAAGDK 108
Query: 194 GNRAALPSSTIMIKQ 208
G R ALP S +MI Q
Sbjct: 109 GKRYALPHSRVMIHQ 123
>gi|206602656|gb|EDZ39137.1| Peptidase S14, ClpP [Leptospirillum sp. Group II '5-way CG']
Length = 203
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 76/131 (58%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M+IP+ T + D+ S L K+RI++LG + V L++A+ L+L+ ED K I
Sbjct: 1 MLIPYVVEQTTRGERSYDIYSRLLKDRIIFLGTAIDDMVANLVIAQLLFLEAEDASKDIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+KP + T+CVG A A+LL AGA G R
Sbjct: 61 LYINSPG--------GVVTAGLAIYDTMQYIKPDVSTICVGQAASMGAVLLAAGADGKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP++ IMI Q
Sbjct: 113 ALPNARIMIHQ 123
>gi|414153433|ref|ZP_11409759.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411455112|emb|CCO07662.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 195
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G V +L++A+FL+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHVADLVIAQFLFLEAEDPEKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KPP+ T+C+G A + LL AG KG R ALP + IMI Q
Sbjct: 72 VTAGLAIYDTMQYIKPPVSTICLGQASSMGSFLLAAGTKGKRYALPMARIMIHQ 125
>gi|312880128|ref|ZP_07739928.1| ATP-dependent Clp protease proteolytic subunit ClpP [Aminomonas
paucivorans DSM 12260]
gi|310783419|gb|EFQ23817.1| ATP-dependent Clp protease proteolytic subunit ClpP [Aminomonas
paucivorans DSM 12260]
Length = 201
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + L++A+ L+L+ ED EK +YLYINS G G
Sbjct: 27 DIYSRLLKDRIVFLGEEIEEHMANLVVAQLLFLESEDPEKDVYLYINSPG--------GV 78
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+K P+ T+C G A AA+LL GAKG R ALP + IMI Q
Sbjct: 79 VTAGMAIYDTMQYIKCPVSTICTGQAASMAAVLLAGGAKGKRIALPHARIMIHQ 132
>gi|95930403|ref|ZP_01313139.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfuromonas acetoxidans DSM 684]
gi|95133443|gb|EAT15106.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfuromonas acetoxidans DSM 684]
Length = 196
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG ++ L++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGGGIDDQISNLVIAQLLFLESEDPEKDIHLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+K P+ T+CVG A A+LL AGA+G R LP+S IMI Q
Sbjct: 71 VTAGMAIYDTMQYIKAPVSTICVGQAASMGAVLLAAGAEGKRFTLPNSRIMIHQ 124
>gi|251797042|ref|YP_003011773.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
gi|247544668|gb|ACT01687.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
Length = 194
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + V I+A+ L+L ED +K I LYINS G G
Sbjct: 20 DIYSRLLKDRIVFLGSAIDDQVANSIVAQLLFLAAEDPDKEISLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD M Y+KP + T+CVG A AA+LL +GAKG R ALPSS +MI Q
Sbjct: 72 TTAGFAIYDTMQYIKPEVHTICVGMAASFAAILLLSGAKGKRFALPSSEVMIHQ 125
>gi|422340211|ref|ZP_16421165.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
nucleatum subsp. polymorphum F0401]
gi|355370151|gb|EHG17539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
nucleatum subsp. polymorphum F0401]
Length = 193
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDSEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T+ AIYD M Y+KP + T+CVG A A LL AGAKG R AL +S IMI Q
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQ 123
>gi|403252433|ref|ZP_10918743.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. EMP]
gi|402812446|gb|EJX26925.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. EMP]
Length = 201
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 77/134 (57%), Gaps = 9/134 (6%)
Query: 76 VITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
+I +P T + D+ S L K+RIV+LG V L++A+ L+L+ ED +K
Sbjct: 6 IIDQYVPIVVESTGRYERAYDIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDK 65
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
+YLYINS G G T AIYD M Y+K + T+CVG A AA+LL AGAKG
Sbjct: 66 DVYLYINSPG--------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKG 117
Query: 195 NRAALPSSTIMIKQ 208
R ALP++ IMI Q
Sbjct: 118 KRYALPNARIMIHQ 131
>gi|289548353|ref|YP_003473341.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermocrinis
albus DSM 14484]
gi|289181970|gb|ADC89214.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermocrinis
albus DSM 14484]
Length = 199
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV LG V LI+A+ L+L+ +D EK IY+YINS G G
Sbjct: 24 DIYSRLLQDRIVLLGYPIDDHVANLIVAQLLFLEAQDPEKDIYMYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A AA+LL AGAKG R +LP S IMI Q
Sbjct: 76 VTAGMAIYDTMQYIKPDVVTICIGQAASMAAVLLAAGAKGKRYSLPHSRIMIHQ 129
>gi|295112117|emb|CBL28867.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synergistetes
bacterium SGP1]
Length = 195
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 77/132 (58%), Gaps = 9/132 (6%)
Query: 78 TMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
T IP+ T + D+ S L K+RIV+LG + V I+A+ L+L+ ED +K I
Sbjct: 3 TYYIPYVIEQTGRGERSYDIYSRLLKDRIVFLGTQVMDDVANSIVAQLLFLESEDPDKDI 62
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
+LYINS G G T AIYD M Y+K P+ T+CVG A AA+LL GA+G R
Sbjct: 63 HLYINSPG--------GSVTAGMAIYDTMQYIKSPVSTICVGMAASMAAILLSGGARGKR 114
Query: 197 AALPSSTIMIKQ 208
ALP++ +MI Q
Sbjct: 115 LALPNAEVMIHQ 126
>gi|307244056|ref|ZP_07526175.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Peptostreptococcus stomatis DSM 17678]
gi|306492580|gb|EFM64614.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Peptostreptococcus stomatis DSM 17678]
Length = 194
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + L++A+ L+L+ +D +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGDEVNDATASLVVAQLLFLEADDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG A A LL AGAKG R ALP+STIMI Q
Sbjct: 71 VTAGLAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSTIMIHQ 124
>gi|322515314|ref|ZP_08068311.1| ATP-dependent Clp protease, protease subunit [Actinobacillus ureae
ATCC 25976]
gi|322118690|gb|EFX90902.1| ATP-dependent Clp protease, protease subunit [Actinobacillus ureae
ATCC 25976]
Length = 217
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Query: 67 FCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLY 126
F + + R+P + ++ T+ + D+ S L K RI++L + LI+A+ L+
Sbjct: 12 FLRFRIRNPKMAVIPMVVEQTSKGERSYDIYSRLLKERIIFLNGEVEDHMANLIVAQLLF 71
Query: 127 LQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAAL 186
L+ ED EK IYLYINS G G T AIYD M ++KP + TLC G A A
Sbjct: 72 LESEDPEKDIYLYINSPG--------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAF 123
Query: 187 LLGAGAKGNRAALPSSTIMIKQ 208
LL GAKG R ALP + +MI Q
Sbjct: 124 LLSGGAKGKRFALPHARVMIHQ 145
>gi|373496129|ref|ZP_09586677.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
12_1B]
gi|404368998|ref|ZP_10974344.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
ulcerans ATCC 49185]
gi|313688290|gb|EFS25125.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
ulcerans ATCC 49185]
gi|371966040|gb|EHO83532.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
12_1B]
Length = 191
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T + D+ S L K+RI++LG +V I+A+ L+L+ ED +K I +YINS G
Sbjct: 10 TGRSERAYDIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPDKDIIMYINSPG-- 67
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M Y+KP + T+C+G A ALLLGAGAKG R AL S IMI
Sbjct: 68 ------GVVTAGMAIYDTMNYIKPDVQTVCIGQAASMGALLLGAGAKGKRYALEHSRIMI 121
Query: 207 KQ 208
Q
Sbjct: 122 HQ 123
>gi|406967034|gb|EKD92235.1| hypothetical protein ACD_29C00105G0002 [uncultured bacterium]
Length = 207
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 84/143 (58%), Gaps = 11/143 (7%)
Query: 66 SFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFL 125
SF + + R+ ++ MV+ SG + D+ S L K+R+V+L + L++A+ L
Sbjct: 2 SFEQMEFRNNLVPMVVE-QSGRG--ERAYDIYSRLLKDRVVFLIGQVEEHMANLVIAQLL 58
Query: 126 YLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAA 185
+L+ E+ EK I LYINS G G T AIYD M ++KP + TLC+G A AA
Sbjct: 59 FLESENPEKDISLYINSPG--------GVVTAGMAIYDTMQFIKPDVRTLCIGQAASIAA 110
Query: 186 LLLGAGAKGNRAALPSSTIMIKQ 208
LLL AG KG R ALP+STIMI Q
Sbjct: 111 LLLSAGTKGKRHALPNSTIMIHQ 133
>gi|398347022|ref|ZP_10531725.1| ATP-dependent Clp protease proteolytic subunit [Leptospira broomii
str. 5399]
Length = 198
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 78/137 (56%), Gaps = 11/137 (8%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
VIP T + D+ S L K+RI++LG + +++A+ L+L E+ ++ IYL
Sbjct: 3 VIPVVIEQTGRGERSYDIYSRLLKDRIIFLGNAISDEYANVVIAQLLFLDAENPDRDIYL 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G GY + AIYD M Y+K + TLCVG A AALLL GAKG R+A
Sbjct: 63 YINSPG--------GYVSSGLAIYDTMQYIKADVRTLCVGQASSMAALLLAGGAKGKRSA 114
Query: 199 LPSSTIMIKQ--AGDTG 213
LP S IM+ Q G TG
Sbjct: 115 LPHSRIMMHQPTGGATG 131
>gi|308069047|ref|YP_003870652.1| ATP-dependent Clp protease proteolytic subunit (endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|305858326|gb|ADM70114.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Paenibacillus polymyxa E681]
Length = 194
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 80/133 (60%), Gaps = 9/133 (6%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+++ +P+ TA + D+ S L K+RIV++G + + I+A+ L+L ED EK
Sbjct: 1 MSVYVPYVVEQTAQGERSYDIYSRLLKDRIVFVGAAIDDHLANSIIAQLLFLAAEDPEKE 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IY+YINS G G + FAIYD M Y+KP + T+C G A A+LL AGAKG
Sbjct: 61 IYMYINSPG--------GSTSAGFAIYDTMQYIKPDVHTICTGFAASFGAILLLAGAKGK 112
Query: 196 RAALPSSTIMIKQ 208
R+ALP+S IMI Q
Sbjct: 113 RSALPNSEIMIHQ 125
>gi|163781838|ref|ZP_02176838.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159883058|gb|EDP76562.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 201
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV LG V LI+A+ L+L+ +D +K IYLYINS G G
Sbjct: 26 DIYSRLLQDRIVLLGFPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPG--------GS 77
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T A+YD M Y+KP + T+C+G A A+LL AGAKG R ALP S IMI Q
Sbjct: 78 VTAGMAVYDTMQYIKPDVVTICIGQAASMGAVLLAAGAKGKRYALPHSRIMIHQ 131
>gi|85859380|ref|YP_461582.1| ATP-dependent Clp protease proteolytic subunit [Syntrophus
aciditrophicus SB]
gi|108935920|sp|Q2LTK5.1|CLPP_SYNAS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|85722471|gb|ABC77414.1| ATP-dependent Clp protease proteolytic subunit [Syntrophus
aciditrophicus SB]
Length = 194
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V LI+A+ L+L+ ED +K I+ Y+N+ G G+
Sbjct: 19 DIYSRLLKDRIIFLGTPIDDEVANLIIAQLLFLESEDPDKEIFFYLNTPG--------GH 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M Y+KPP+ T+CVG A ALLL AG +G R+ALP S I+I Q
Sbjct: 71 ISSGMAIYDTMRYIKPPVATVCVGQAASMGALLLAAGEQGKRSALPHSRILIHQ 124
>gi|310641963|ref|YP_003946721.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|386040947|ref|YP_005959901.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
gi|309246913|gb|ADO56480.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|343096985|emb|CCC85194.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
Length = 194
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 80/133 (60%), Gaps = 9/133 (6%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+++ +P+ TA + D+ S L K+RIV++G + + I+A+ L+L ED EK
Sbjct: 1 MSVYVPYVVEQTAQGERSYDIYSRLLKDRIVFVGATIDDQLANSIIAQLLFLAAEDPEKD 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IY+YINS G G + FAIYD M Y+KP + T+C G A A+LL AGAKG
Sbjct: 61 IYMYINSPG--------GSTSAGFAIYDTMQYIKPEVHTICTGFAASFGAILLLAGAKGK 112
Query: 196 RAALPSSTIMIKQ 208
R+ALP+S IMI Q
Sbjct: 113 RSALPNSEIMIHQ 125
>gi|146295915|ref|YP_001179686.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|166201809|sp|A4XHW0.1|CLPP_CALS8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|145409491|gb|ABP66495.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 195
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 78/140 (55%), Gaps = 11/140 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV L + LI+A+ L+L+ ED +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ--AGDT 212
T FAIYD + Y+KP + T+CVG A A LL AGAKG R ALP+S IMI Q G
Sbjct: 72 VTAGFAIYDTIQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPIGGVR 131
Query: 213 GICL-LKSSLTWLNSVKLNV 231
G +K W+ +K +
Sbjct: 132 GQATDIKIHAEWILKIKQRI 151
>gi|323703643|ref|ZP_08115286.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
gi|333922902|ref|YP_004496482.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323531415|gb|EGB21311.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
gi|333748463|gb|AEF93570.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 195
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + L++A+FL+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A + LL AGAKG R ALP + IMI Q
Sbjct: 72 VTAGLAIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAKGKRYALPQARIMIHQ 125
>gi|427412668|ref|ZP_18902860.1| ATP-dependent Clp protease proteolytic subunit [Veillonella ratti
ACS-216-V-Col6b]
gi|425716475|gb|EKU79459.1| ATP-dependent Clp protease proteolytic subunit [Veillonella ratti
ACS-216-V-Col6b]
Length = 197
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG V L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 18 DIYSRLLKDRIVFLGGPINDDVANLVIAQLLFLEAEDPDKDIHLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG+A A+LL AGAKG R ALP + +MI Q
Sbjct: 70 VTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGAKGKRYALPHARVMIHQ 123
>gi|336401433|ref|ZP_08582202.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
21_1A]
gi|336161020|gb|EGN64036.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
21_1A]
Length = 193
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T+ AIYD M Y+KP + T+CVG A A LL AGAKG R AL +S IMI Q
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQ 123
>gi|288818082|ref|YP_003432430.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenobacter
thermophilus TK-6]
gi|384128847|ref|YP_005511460.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobacter thermophilus TK-6]
gi|288787482|dbj|BAI69229.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenobacter
thermophilus TK-6]
gi|308751684|gb|ADO45167.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobacter thermophilus TK-6]
Length = 199
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 80/147 (54%), Gaps = 19/147 (12%)
Query: 74 SPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
S VI ++P EQ P D+ S L ++RIV LG V LI+A+ L+L+
Sbjct: 2 SKVIDQLVPIV----IEQTPRGERAYDIYSRLLQDRIVLLGYPIDDHVANLIVAQLLFLE 57
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
+D EK IY+YINS G G T AIYD M Y+KP + T+C+G A A+LL
Sbjct: 58 AQDPEKDIYMYINSPG--------GSVTAGMAIYDTMQYIKPDVVTICIGQAASMGAVLL 109
Query: 189 GAGAKGNRAALPSSTIMIKQ--AGDTG 213
AGA G R ALP S IMI Q G TG
Sbjct: 110 AAGAPGKRYALPHSRIMIHQPLGGITG 136
>gi|452851006|ref|YP_007492690.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
piezophilus]
gi|451894660|emb|CCH47539.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
piezophilus]
Length = 203
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 77 ITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
I MVI T T + D+ S L K+RI+ LG + V LI A+ L+L+ ED EK I
Sbjct: 4 IPMVIETTGRT---ERAYDIYSRLLKDRIILLGSAIDDHVASLICAQLLFLESEDPEKEI 60
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
Y+YINS G G + AIYD M Y+ P+ TLC+G A ALLLGAG G R
Sbjct: 61 YMYINSPG--------GSVSSGMAIYDTMQYISAPVATLCLGQAASMGALLLGAGEAGMR 112
Query: 197 AALPSSTIMIKQ 208
ALP S IMI Q
Sbjct: 113 YALPHSRIMIHQ 124
>gi|399050633|ref|ZP_10740728.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|398051596|gb|EJL43914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
Length = 200
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V +++A+ L+LQ ED EK I+LYINS G G
Sbjct: 21 DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 73 ITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGTKGKRYALPNSEVMIHQ 126
>gi|417001829|ref|ZP_11941334.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus prevotii ACS-065-V-Col13]
gi|325479715|gb|EGC82805.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus prevotii ACS-065-V-Col13]
Length = 197
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++L ++++I+A+ L+L+ ED +K I YINS G G
Sbjct: 23 DIYSRLLKDRIIFLSGEVRDEISDIIIAQLLFLESEDPDKDIQFYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A AA+LL +GAKG R +LPSS IMI Q
Sbjct: 75 VTSGLAIYDTMNYIKPDVSTICIGQAASMAAVLLSSGAKGKRFSLPSSNIMIHQ 128
>gi|255658239|ref|ZP_05403648.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mitsuokella
multacida DSM 20544]
gi|260849549|gb|EEX69556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mitsuokella
multacida DSM 20544]
Length = 199
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V ++A+ L+L+ ED +K I+LYINS G G
Sbjct: 14 DIYSRLLKDRIIFLGGPIDDAVANTVVAQLLFLESEDPDKDIHLYINSPG--------GV 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A ALLL AGAKG R ALP++ IMI Q
Sbjct: 66 VTAGLAIYDTMQYIKPDVSTICIGQAASMGALLLTAGAKGKRYALPNARIMIHQ 119
>gi|430750770|ref|YP_007213678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
gi|430734735|gb|AGA58680.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
Length = 198
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V L++A+ L+L ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSPIDDDVANLVIAQLLFLAAEDPEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T IYD M Y+KP + T+CVG A A+LLL AGAKG R ALP+S +MI Q
Sbjct: 71 VTAGLGIYDTMQYIKPDVSTICVGIAASMASLLLTAGAKGKRYALPNSEVMIHQ 124
>gi|217967475|ref|YP_002352981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
turgidum DSM 6724]
gi|217336574|gb|ACK42367.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
turgidum DSM 6724]
Length = 194
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 78/135 (57%), Gaps = 17/135 (12%)
Query: 79 MVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
M++P EQ P D+ S L K+RIV+LG + V LI+A+ L+L+ ED E
Sbjct: 1 MLVPIV----IEQTPRGERAYDIYSRLLKSRIVFLGTTINDEVANLIVAQLLFLESEDPE 56
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
K IYLYINS G G + AIYD + ++KP + T+CVG A AA+LL AG K
Sbjct: 57 KDIYLYINSPG--------GEVSAGLAIYDTIRHIKPKVATVCVGQAASMAAILLAAGDK 108
Query: 194 GNRAALPSSTIMIKQ 208
G R ALP S +MI Q
Sbjct: 109 GKRYALPHSRVMIHQ 123
>gi|398345034|ref|ZP_10529737.1| ATP-dependent Clp protease proteolytic subunit [Leptospira inadai
serovar Lyme str. 10]
Length = 198
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 78/137 (56%), Gaps = 11/137 (8%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
VIP T + D+ S L K+RI++LG + +++A+ L+L E+ ++ IYL
Sbjct: 3 VIPVVIEQTGRGERSYDIYSRLLKDRIIFLGNAISDEYANVVIAQLLFLDAENPDRDIYL 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G GY + AIYD M Y+K + TLCVG A AALLL GAKG R+A
Sbjct: 63 YINSPG--------GYVSSGLAIYDTMQYIKADVRTLCVGQASSMAALLLAGGAKGKRSA 114
Query: 199 LPSSTIMIKQ--AGDTG 213
LP S IM+ Q G TG
Sbjct: 115 LPHSRIMMHQPTGGATG 131
>gi|237743260|ref|ZP_04573741.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
7_1]
gi|260495117|ref|ZP_05815246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_33]
gi|422939797|ref|ZP_16967169.1| ATP-dependent Clp protease, protease subunit [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
gi|229433039|gb|EEO43251.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
7_1]
gi|260197560|gb|EEW95078.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_33]
gi|339890648|gb|EGQ79742.1| ATP-dependent Clp protease, protease subunit [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
Length = 193
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T+ AIYD M Y+KP + T+CVG A A LL AGAKG R AL +S IMI Q
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQ 123
>gi|34762747|ref|ZP_00143736.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|256846930|ref|ZP_05552384.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_36A2]
gi|294784271|ref|ZP_06749566.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_27]
gi|421144657|ref|ZP_15604566.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
gi|27887597|gb|EAA24677.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|256717728|gb|EEU31287.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_36A2]
gi|294488137|gb|EFG35488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_27]
gi|395488964|gb|EJG09810.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
Length = 193
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T+ AIYD M Y+KP + T+CVG A A LL AGAKG R AL +S IMI Q
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQ 123
>gi|433542295|ref|ZP_20498724.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
gi|432186391|gb|ELK43863.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
Length = 198
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V +++A+ L+LQ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGTKGKRYALPNSEVMIHQ 124
>gi|19705312|ref|NP_602807.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|237742958|ref|ZP_04573439.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
4_1_13]
gi|254302272|ref|ZP_04969630.1| S14 family endopeptidase ClpP [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|289766533|ref|ZP_06525911.1| endopeptidase Clp [Fusobacterium sp. D11]
gi|296328560|ref|ZP_06871079.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|423137615|ref|ZP_17125258.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. animalis F0419]
gi|22653693|sp|Q8RHJ8.1|CLPP_FUSNN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|19713281|gb|AAL94106.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|148322464|gb|EDK87714.1| S14 family endopeptidase ClpP [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|229430606|gb|EEO40818.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
4_1_13]
gi|289718088|gb|EFD82100.1| endopeptidase Clp [Fusobacterium sp. D11]
gi|296154369|gb|EFG95168.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|371959667|gb|EHO77345.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. animalis F0419]
Length = 193
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T+ AIYD M Y+KP + T+CVG A A LL AGAKG R AL +S IMI Q
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQ 123
>gi|421527266|ref|ZP_15973870.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum ChDC F128]
gi|402256700|gb|EJU07178.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum ChDC F128]
Length = 193
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T+ AIYD M Y+KP + T+CVG A A LL AGAKG R AL +S IMI Q
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQ 123
>gi|404493314|ref|YP_006717420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
gi|90183182|sp|Q3A3X5.1|CLPP_PELCD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77545370|gb|ABA88932.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
Length = 194
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + V LI+A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIFSRLLKDRIIFLGGAVDDQVANLIIAQMLFLESEDPEKEIFLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YV+ P+ TLCVG A A+LL AG +G R ALP + IMI Q
Sbjct: 71 VTAGMAIYDTMQYVRCPVSTLCVGQAASMGAVLLAAGGEGKRFALPHARIMIHQ 124
>gi|227500202|ref|ZP_03930271.1| endopeptidase Clp [Anaerococcus tetradius ATCC 35098]
gi|227217724|gb|EEI83028.1| endopeptidase Clp [Anaerococcus tetradius ATCC 35098]
Length = 197
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++L ++++I+A+ L+L+ ED +K I YINS G G
Sbjct: 23 DIYSRLLKDRIIFLSGEVRDEISDIIIAQLLFLESEDPDKDIQFYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A AA+LL +GAKG R +LPSS IMI Q
Sbjct: 75 VTSGLAIYDTMNYIKPDVSTICIGQAASMAAVLLSSGAKGKRYSLPSSNIMIHQ 128
>gi|219872047|ref|YP_002476422.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
parasuis SH0165]
gi|254763791|sp|B8F822.1|CLPP_HAEPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|219692251|gb|ACL33474.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
parasuis SH0165]
Length = 193
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 77/133 (57%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
VI MV+ +S + D+ S L K RI++L + +LI+A+ L+L+ ED EK
Sbjct: 3 VIPMVVEQSSKG---ERAYDIYSRLLKERIIFLNGGVEDEMAKLIIAQMLFLEAEDPEKD 59
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINS G G T AIYD M ++KP + TLC+G A A LL AGAKG
Sbjct: 60 IYLYINSPG--------GVVTAGLAIYDTMNFIKPDVSTLCMGQACSMGAFLLSAGAKGK 111
Query: 196 RAALPSSTIMIKQ 208
R ALP+S +MI Q
Sbjct: 112 RFALPNSRVMIHQ 124
>gi|442319289|ref|YP_007359310.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
gi|441486931|gb|AGC43626.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
Length = 206
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V +I+A+ L+L+ ED +K I +YINS G G
Sbjct: 21 DIYSRLLKDRIIMLGTEIDDDVANVIVAQLLFLESEDPDKDINIYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKPP+ T+CVG A A+LL AG KG R ALPSS IMI Q
Sbjct: 73 VTAGMAIYDTMQYVKPPVSTICVGQAASMGAVLLLAGTKGKRYALPSSRIMIHQ 126
>gi|336420043|ref|ZP_08600289.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 11_3_2]
gi|336162184|gb|EGN65166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 11_3_2]
Length = 193
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T+ AIYD M Y+KP + T+CVG A A LL AGAKG R AL +S IMI Q
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQ 123
>gi|126700924|ref|YP_001089821.1| ATP-dependent Clp protease proteolytic subunit 1 [Clostridium
difficile 630]
gi|254976904|ref|ZP_05273376.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-66c26]
gi|255094290|ref|ZP_05323768.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CIP 107932]
gi|255308377|ref|ZP_05352548.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile ATCC 43255]
gi|255316044|ref|ZP_05357627.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-76w55]
gi|255518701|ref|ZP_05386377.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-97b34]
gi|255651823|ref|ZP_05398725.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-37x79]
gi|255657263|ref|ZP_05402672.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-23m63]
gi|260684849|ref|YP_003216134.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260688507|ref|YP_003219641.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|296451896|ref|ZP_06893613.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296879709|ref|ZP_06903684.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|306521610|ref|ZP_07407957.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-32g58]
gi|384362518|ref|YP_006200370.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile BI1]
gi|423081791|ref|ZP_17070390.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|423085912|ref|ZP_17074347.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|423089385|ref|ZP_17077744.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
gi|115252361|emb|CAJ70202.1| ATP-dependent Clp protease proteolytic subunit 1 [Clostridium
difficile 630]
gi|260211012|emb|CBA66324.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260214524|emb|CBE07039.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|296259278|gb|EFH06156.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296429298|gb|EFH15170.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|357548303|gb|EHJ30169.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|357549864|gb|EHJ31702.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|357558182|gb|EHJ39684.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
Length = 194
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRLALPNSEIMIHQ 124
>gi|257065888|ref|YP_003152144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerococcus
prevotii DSM 20548]
gi|256797768|gb|ACV28423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerococcus
prevotii DSM 20548]
Length = 197
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++L ++++I+A+ L+L+ ED +K I YINS G G
Sbjct: 23 DIYSRLLKDRIIFLSGEVRDEISDIIIAQLLFLESEDPDKDIQFYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A AA+LL +GAKG R +LPSS IMI Q
Sbjct: 75 VTSGLAIYDTMNYIKPDVSTICIGQAASMAAVLLSSGAKGKRYSLPSSNIMIHQ 128
>gi|238926240|ref|ZP_04658000.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
gi|238885920|gb|EEQ49558.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
Length = 197
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG SV +I+A+ L+L+ ED +K I+LYINS G G
Sbjct: 14 DIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLYINSPG--------GV 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG A ++LL AGAKG R ALP + IMI Q
Sbjct: 66 VTAGLAIYDTMQYIKPDVSTICVGQAASMGSILLTAGAKGKRYALPHARIMIHQ 119
>gi|410666834|ref|YP_006919205.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
gi|409104581|gb|AFV10706.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
Length = 201
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG SV +I+A+ L+L+ ED EK IYLYINS G G
Sbjct: 23 DIYSRLLKDRIIFLGTPIDDSVANIIIAQMLFLEAEDPEKDIYLYINSPG--------GS 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AI+D M YVKP + T+CVG A A LL AGAK R A P+S IMI Q
Sbjct: 75 ITAGLAIFDTMRYVKPDVSTICVGMAASMGAFLLAAGAKKKRFATPNSEIMIHQ 128
>gi|255102472|ref|ZP_05331449.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-63q42]
Length = 194
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRLALPNSEIMIHQ 124
>gi|340758793|ref|ZP_08695375.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
varium ATCC 27725]
gi|251836566|gb|EES65101.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
varium ATCC 27725]
Length = 191
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T + D+ S L K+RI++LG +V I+A+ L+L+ ED +K I +YINS G
Sbjct: 10 TGRSERAYDIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPDKDIIMYINSPG-- 67
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M Y+KP + T+C+G A ALLLGAGA+G R AL S IMI
Sbjct: 68 ------GVVTAGMAIYDTMNYIKPDVQTVCIGQAASMGALLLGAGARGKRYALEHSRIMI 121
Query: 207 KQ 208
Q
Sbjct: 122 HQ 123
>gi|18203597|sp|Q9X5N0.1|CLPP2_MYXXA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|4838463|gb|AAD31002.1|AF127082_1 ATP-dependent protease proteolytic subunit ClpP [Myxococcus xanthus
DZF1]
Length = 206
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V +I+A+ L+L+ ED +K I LYINS G G
Sbjct: 21 DIISRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVK P+ T+CVG A A+LL AGAKG R ALPSS IMI Q
Sbjct: 73 VTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQ 126
>gi|226311381|ref|YP_002771275.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226094329|dbj|BAH42771.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 193
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M+IP T+ + D+ S L K+RI+ LG + LI+A+ L+LQ ED +K I
Sbjct: 1 MLIPMVIEQTSRGERSYDIYSRLLKDRIILLGTEIDDEIANLIVAQLLFLQAEDPDKDIS 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+KP + T+CVG A A LL AGAKG R
Sbjct: 61 LYINSPG--------GSVTAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP++ +MI Q
Sbjct: 113 ALPNAEVMIHQ 123
>gi|15643458|ref|NP_228504.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
gi|148269380|ref|YP_001243840.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
petrophila RKU-1]
gi|170288038|ref|YP_001738276.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. RQ2]
gi|281411923|ref|YP_003346002.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|418045135|ref|ZP_12683231.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
gi|6685314|sp|Q9WZF9.1|CLPP_THEMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214719|sp|A5IJ91.1|CLPP_THEP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706553|sp|B1L812.1|CLPP_THESQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|4981218|gb|AAD35777.1|AE001741_10 ATP-dependent Clp protease, proteolytic subunit [Thermotoga
maritima MSB8]
gi|147734924|gb|ABQ46264.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
petrophila RKU-1]
gi|170175541|gb|ACB08593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
sp. RQ2]
gi|281373026|gb|ADA66588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|351678217|gb|EHA61364.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
Length = 203
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 77/134 (57%), Gaps = 9/134 (6%)
Query: 76 VITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
+I +P T + D+ S L K+RIV+LG V L++A+ L+L+ ED +K
Sbjct: 8 IIDQYVPIVVESTGRYERAYDIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDK 67
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
+YLYINS G G T AIYD M Y+K + T+CVG A AA+LL AGAKG
Sbjct: 68 DVYLYINSPG--------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKG 119
Query: 195 NRAALPSSTIMIKQ 208
R ALP++ IMI Q
Sbjct: 120 KRYALPNARIMIHQ 133
>gi|451979976|ref|ZP_21928378.1| ATP-dependent Clp protease, proteolytic subunit clpP [Nitrospina
gracilis 3/211]
gi|451762848|emb|CCQ89596.1| ATP-dependent Clp protease, proteolytic subunit clpP [Nitrospina
gracilis 3/211]
Length = 215
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + LI+A+ L+L+ ++ ++ IYLYINS G G+
Sbjct: 29 DIYSRLLKDRIIFIGQQIEDHMANLIIAQLLFLESDEPDQDIYLYINSPG--------GH 80
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M Y+KP + T+C+G A ALLL AG KG R ALP+S +MI Q
Sbjct: 81 VSSGLAIYDTMQYIKPDVQTICIGQAASMGALLLTAGTKGKRFALPNSRVMIHQ 134
>gi|442323969|ref|YP_007363990.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
gi|441491611|gb|AGC48306.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
Length = 203
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 79 MVIPFTSGTAWE-QPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M +PF T + DL S L K+RI+ LG V +I+A+ L+L+ ED +K I
Sbjct: 1 MNVPFVIETTHRGERAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M YVK P+ T+CVG A ALLL AGAKG R
Sbjct: 61 LYINSPG--------GSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRY 112
Query: 198 ALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 113 ALPNSRIMIHQ 123
>gi|348026429|ref|YP_004766234.1| ATP-dependent Clp protease proteolytic subunit [Megasphaera
elsdenii DSM 20460]
gi|341822483|emb|CCC73407.1| ATP-dependent Clp protease proteolytic subunit [Megasphaera
elsdenii DSM 20460]
Length = 201
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 78/131 (59%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M +P TA + D+ S L K+RIV+LG +V I+A+ L+L+ E+ +K I+
Sbjct: 4 MYVPIVVEQTAQGERSYDIYSRLLKDRIVFLGGPIDDAVANSIIAQLLFLEAENPDKDIH 63
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+KP + T+CVG+A A++LL AGAKG R
Sbjct: 64 LYINSPG--------GVVTAGMAIYDTMQYIKPDVSTICVGSAASMASVLLTAGAKGKRF 115
Query: 198 ALPSSTIMIKQ 208
ALP S +MI Q
Sbjct: 116 ALPHSQVMIHQ 126
>gi|403387723|ref|ZP_10929780.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
JC122]
Length = 194
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG + LI+A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLGEEVNSTTASLIVAQLLFLESEDPDKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T+ AIYD M Y+KP + T+C G A A LL +GAKG R ALP+S IMI Q
Sbjct: 71 ITDGMAIYDTMNYIKPDVVTICTGLAASMGAFLLSSGAKGKRFALPNSEIMIHQ 124
>gi|405363134|ref|ZP_11026132.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397090077|gb|EJJ20963.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 203
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 79 MVIPFTSGTAWE-QPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M +PF T + DL S L K+RI+ LG V +I+A+ L+L+ ED +K I
Sbjct: 1 MNVPFVIETTHRGERAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M YVK P+ T+CVG A ALLL AGAKG R
Sbjct: 61 LYINSPG--------GSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRY 112
Query: 198 ALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 113 ALPNSRIMIHQ 123
>gi|310657900|ref|YP_003935621.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [[Clostridium] sticklandii]
gi|308824678|emb|CBH20716.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [[Clostridium] sticklandii]
Length = 194
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGDQVNDHTASLIVAQLLHLESEDPDKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTMQYIKPDVATICVGMAASMGAFLLTAGAKGKRFALPNSEIMIHQ 124
>gi|338532521|ref|YP_004665855.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|337258617|gb|AEI64777.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 203
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 79 MVIPFTSGTAWE-QPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M +PF T + DL S L K+RI+ LG V +I+A+ L+L+ ED +K I
Sbjct: 1 MNVPFVIETTHRGERAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M YVK P+ T+CVG A ALLL AGAKG R
Sbjct: 61 LYINSPG--------GSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRY 112
Query: 198 ALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 113 ALPNSRIMIHQ 123
>gi|37523336|ref|NP_926713.1| ATP-dependent Clp protease-like protein [Gloeobacter violaceus PCC
7421]
gi|81708690|sp|Q7NEW1.1|CLPP2_GLOVI RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|35214340|dbj|BAC91708.1| clpP [Gloeobacter violaceus PCC 7421]
Length = 218
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 70/105 (66%), Gaps = 6/105 (5%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYD 163
RIVYLG V EL++A+ LYL+ ED KPI +YINS G G+ET AFA+YD
Sbjct: 37 RIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPGVA------GFETSAFAVYD 90
Query: 164 VMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
M +V+ PI T+C+G A G +ALL+ AG KG R +LP+S I++ Q
Sbjct: 91 TMRHVRMPIKTICLGLAGGFSALLMAAGTKGQRMSLPNSRIILYQ 135
>gi|108757731|ref|YP_634562.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|3023519|sp|O30612.1|CLPP2_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|2384690|gb|AAB97819.1| proteosome major subunit [Myxococcus xanthus DK 1622]
gi|108461611|gb|ABF86796.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
Length = 203
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 79 MVIPFTSGTAWE-QPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M +PF T + DL S L K+RI+ LG V +I+A+ L+L+ ED +K I
Sbjct: 1 MNVPFVIETTHRGERAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M YVK P+ T+CVG A ALLL AGAKG R
Sbjct: 61 LYINSPG--------GSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRY 112
Query: 198 ALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 113 ALPNSRIMIHQ 123
>gi|83589392|ref|YP_429401.1| ATP-dependent Clp protease proteolytic subunit [Moorella
thermoacetica ATCC 39073]
gi|115311785|sp|Q2RL31.1|CLPP_MOOTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83572306|gb|ABC18858.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorella
thermoacetica ATCC 39073]
Length = 199
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 80/135 (59%), Gaps = 11/135 (8%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
S ++ MV+ TS + D+ S L K+RI++LG + V L++A+ L+L+ ED +
Sbjct: 2 SVLVPMVVEQTS---RGERAYDIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPD 58
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
K I+LYINS G G + AI+D M Y++P + T+CVG A A LL AGAK
Sbjct: 59 KDIHLYINSPG--------GSISAGMAIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAK 110
Query: 194 GNRAALPSSTIMIKQ 208
G R ALP+S IMI Q
Sbjct: 111 GKRFALPNSEIMIHQ 125
>gi|304437034|ref|ZP_07396997.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
gi|304369985|gb|EFM23647.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
Length = 203
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG SV +I+A+ L+L+ ED +K I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG A ++LL AGAKG R ALP + IMI Q
Sbjct: 72 VTAGLAIYDTMQYIKPDVSTICVGQAASMGSILLTAGAKGKRYALPHARIMIHQ 125
>gi|222100864|ref|YP_002535432.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
gi|221573254|gb|ACM24066.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
Length = 200
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 76/134 (56%), Gaps = 9/134 (6%)
Query: 76 VITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
+I +P T + D+ S L K+RIV+LG V L++A+ L+L+ ED +K
Sbjct: 6 IIDQYVPIVVESTGRYERAYDIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDK 65
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
+YLYINS G G T AIYD M Y+K + T+CVG A AA+LL AG KG
Sbjct: 66 DVYLYINSPG--------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGTKG 117
Query: 195 NRAALPSSTIMIKQ 208
R ALP++ IMI Q
Sbjct: 118 KRYALPNARIMIHQ 131
>gi|405365022|ref|ZP_11026468.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397089587|gb|EJJ20496.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 206
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V +I+A+ L+L+ ED +K I LYINS G G
Sbjct: 21 DIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVK P+ T+CVG A A+LL AGAKG R ALPSS IMI Q
Sbjct: 73 VTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQ 126
>gi|284097335|ref|ZP_06385465.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3]
gi|283831154|gb|EFC35134.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3]
Length = 203
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M+IP T + D+ S L K+RI++LG + LI+A+ L+L+ ED EK I
Sbjct: 1 MLIPMVIESTNRGERAYDIYSRLLKDRIIFLGAPIDDIFSNLIIAQLLFLEAEDPEKDIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T IYD M YVKPPI T+C+G A ALLL AG +G R
Sbjct: 61 LYINSPG--------GSVTAGMGIYDTMQYVKPPITTICLGQAASMGALLLAAGTQGKRH 112
Query: 198 ALPSSTIMIKQ 208
ALP++ +MI Q
Sbjct: 113 ALPNARVMIHQ 123
>gi|291277236|ref|YP_003517008.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
mustelae 12198]
gi|290964430|emb|CBG40280.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
mustelae 12198]
Length = 195
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV L V I+A+ L+L+ ED +K IY YINS G G
Sbjct: 19 DIYSRLLKDRIVLLSGEINDMVASSIVAQLLFLEAEDAQKDIYFYINSPG--------GA 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AF+IYD M Y++P + T+CVG A ALLL +GAKG R +LP+S IMI Q
Sbjct: 71 VTSAFSIYDTMHYIRPDVATICVGQAASAGALLLSSGAKGKRYSLPNSRIMIHQ 124
>gi|108762291|ref|YP_630243.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|338533213|ref|YP_004666547.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|116270726|sp|Q1DAT0.1|CLPP1_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|108466171|gb|ABF91356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
gi|337259309|gb|AEI65469.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 206
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V +I+A+ L+L+ ED +K I LYINS G G
Sbjct: 21 DIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVK P+ T+CVG A A+LL AGAKG R ALPSS IMI Q
Sbjct: 73 VTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQ 126
>gi|440781233|ref|ZP_20959575.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
pasteurianum DSM 525]
gi|440220838|gb|ELP60044.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
pasteurianum DSM 525]
Length = 194
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + LI+A+ L+L+ ED +K I LYINS G G
Sbjct: 19 DIYSRLLKDRIVFLGEDVNDATASLIVAQLLFLESEDPDKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLTAGAKGKRFALPNSEIMIHQ 124
>gi|398815689|ref|ZP_10574354.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
gi|398034174|gb|EJL27450.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
Length = 193
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M+IP T+ + D+ S L K+RI+ LG + L++A+ L+LQ ED +K I
Sbjct: 1 MLIPMVIEQTSRGERSYDIYSRLLKDRIILLGTEIDDEIANLVVAQLLFLQAEDPDKDIS 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+KP + T+CVG A A LL AGAKG R
Sbjct: 61 LYINSPG--------GSVTAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP++ +MI Q
Sbjct: 113 ALPNAEVMIHQ 123
>gi|118444381|ref|YP_878863.1| ATP-dependent Clp protease proteolytic subunit [Clostridium novyi
NT]
gi|166201817|sp|A0Q2L1.1|CLPP_CLONN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118134837|gb|ABK61881.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
novyi NT]
Length = 195
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG L++A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVTASLVVAQLLFLEAEDPDKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQ 124
>gi|269792564|ref|YP_003317468.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100199|gb|ACZ19186.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 199
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 78/133 (58%), Gaps = 9/133 (6%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ +IP+ T + D+ S L K+RI+++G ++ L++A+ L+L+ ED +K
Sbjct: 6 MSYLIPYVIEQTGRGERSYDIYSRLLKDRIIFIGQEIDDHLSNLVVAQLLFLESEDPDKD 65
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
+++YINS G G T AIYD M YVK P+ T+CVG A AA+LL AG KG
Sbjct: 66 VFVYINSPG--------GVVTAGLAIYDTMQYVKCPVSTICVGQAASMAAVLLSAGEKGK 117
Query: 196 RAALPSSTIMIKQ 208
R LP S IMI Q
Sbjct: 118 RICLPHSRIMIHQ 130
>gi|206890175|ref|YP_002248104.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|226706554|sp|B5YI38.1|CLPP_THEYD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|206742113|gb|ACI21170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 195
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G V +++A+ L+LQ ED EK I++YINS G G
Sbjct: 19 DIYSRLLKDRIIFIGTEINDHVANVVIAQLLFLQTEDPEKDIHIYINSPG--------GM 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M YVKP I T C+G A A +LL AG KG R ALP S +MI Q
Sbjct: 71 VSSGLAIYDTMQYVKPDIATYCIGQASSMACVLLAAGTKGKRFALPHSRVMIHQ 124
>gi|254361750|ref|ZP_04977885.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
gi|452745422|ref|ZP_21945257.1| ATP-dependent Clp protease proteolytic subunit [Mannheimia
haemolytica serotype 6 str. H23]
gi|153093285|gb|EDN74281.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
gi|452086571|gb|EME02959.1| ATP-dependent Clp protease proteolytic subunit [Mannheimia
haemolytica serotype 6 str. H23]
Length = 197
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L ++ LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + TLC G A A LL AGAKG R ALP + IMI Q
Sbjct: 71 VTAGLAIYDTMNFIKPDVATLCTGQAASMGAFLLSAGAKGKRFALPHARIMIHQ 124
>gi|261494048|ref|ZP_05990551.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496191|ref|ZP_05992597.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308143|gb|EEY09440.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310214|gb|EEY11414.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 197
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L ++ LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + TLC G A A LL AGAKG R ALP + IMI Q
Sbjct: 71 VTAGLAIYDTMNFIKPDVATLCTGQAASMGAFLLSAGAKGKRFALPHARIMIHQ 124
>gi|452991802|emb|CCQ96761.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ultunense Esp]
Length = 194
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG +LI+A+ L+L+ ED +K I LYINS G G
Sbjct: 19 DIYSRLLKERIIFLGGEVNDVTADLIVAQLLFLEAEDPDKDIQLYINSPG--------GA 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ FAIYD M Y+KP + T+C+G A A LL AGAKG R +LP+S IMI Q
Sbjct: 71 VSAGFAIYDTMQYIKPDVSTICIGRAASMGAFLLAAGAKGKRFSLPNSDIMIHQ 124
>gi|167855227|ref|ZP_02477997.1| bifunctional indole-3-glycerol phosphate
synthase/phosphoribosylanthranilate isomerase
[Haemophilus parasuis 29755]
gi|167853680|gb|EDS24924.1| bifunctional indole-3-glycerol phosphate
synthase/phosphoribosylanthranilate isomerase
[Haemophilus parasuis 29755]
Length = 193
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 77/133 (57%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
VI MV+ +S + D+ S L K RI++L + +LI+A+ L+L+ ED EK
Sbjct: 3 VIPMVVEQSSKG---ERAYDIYSRLLKERIIFLNGGVEDEMAKLIIAQMLFLEAEDPEKD 59
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINS G G T AIYD M ++KP + TLC+G A A LL +GAKG
Sbjct: 60 IYLYINSPG--------GVVTAGLAIYDTMNFIKPDVSTLCMGQACSMGAFLLSSGAKGK 111
Query: 196 RAALPSSTIMIKQ 208
R ALP+S +MI Q
Sbjct: 112 RFALPNSRVMIHQ 124
>gi|292670226|ref|ZP_06603652.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
ATCC 43541]
gi|292648178|gb|EFF66150.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
ATCC 43541]
Length = 197
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 14 DIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYINSPG--------GV 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A ++LL AGAKG R ALP + IMI Q
Sbjct: 66 VTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQ 119
>gi|262066529|ref|ZP_06026141.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
periodonticum ATCC 33693]
gi|294783780|ref|ZP_06749104.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 1_1_41FAA]
gi|358467634|ref|ZP_09177325.1| hypothetical protein HMPREF9093_01805 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|291379763|gb|EFE87281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
periodonticum ATCC 33693]
gi|294480658|gb|EFG28435.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 1_1_41FAA]
gi|357067511|gb|EHI77623.1| hypothetical protein HMPREF9093_01805 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 193
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDENVANSIIAQLLYLESEDPEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T+ AIYD M Y+KP + T+CVG A A LL +GAKG R AL +S IMI Q
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLSSGAKGKRFALENSRIMIHQ 123
>gi|375084538|ref|ZP_09731403.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
gi|374568042|gb|EHR39235.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
Length = 198
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGGPIDDNVANVVIAQLLFLESEDPDKDIHLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A ++LL AGAKG R ALP S IMI Q
Sbjct: 71 VTAGLAIYDTMQYIKPDVSTICIGQAASMGSVLLAAGAKGKRYALPYSRIMIHQ 124
>gi|340753245|ref|ZP_08690034.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
2_1_31]
gi|422314997|ref|ZP_16396444.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
periodonticum D10]
gi|229422844|gb|EEO37891.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
2_1_31]
gi|404593038|gb|EKA94701.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
periodonticum D10]
Length = 193
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDENVANSIIAQLLYLESEDPEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T+ AIYD M Y+KP + T+CVG A A LL +GAKG R AL +S IMI Q
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLSSGAKGKRFALENSRIMIHQ 123
>gi|189424987|ref|YP_001952164.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacter
lovleyi SZ]
gi|226706453|sp|B3E1Z4.1|CLPP_GEOLS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189421246|gb|ACD95644.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
lovleyi SZ]
Length = 197
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV+LG V +L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 18 DIYSRLLKERIVFLGGEINDQVADLVIAQLLFLEAEDPDKDIHLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AI+D M Y+K P+ T+C+G A A+LL AG KG R ALP + IMI Q
Sbjct: 70 VTAGMAIFDTMNYIKAPVSTICIGQAASMGAVLLTAGEKGKRFALPHARIMIHQ 123
>gi|414161436|ref|ZP_11417696.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410876332|gb|EKS24243.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 194
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|408792290|ref|ZP_11203900.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira meyeri serovar Hardjo str. Went 5]
gi|408463700|gb|EKJ87425.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira meyeri serovar Hardjo str. Went 5]
Length = 200
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + + +I A+ L+L+ E+ ++ IYLYINS G GY
Sbjct: 20 DIFSRLLKDRIIFLGSAIDETYANVISAQLLFLEAENPDRDIYLYINSPG--------GY 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M +KP + TLC+G A AALLL GAKG R+ALP+S IM+ Q
Sbjct: 72 VSSGLAIYDTMQLIKPEVRTLCIGQASSMAALLLAGGAKGKRSALPNSRIMLHQ 125
>gi|392959640|ref|ZP_10325122.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans DSM 17108]
gi|421052494|ref|ZP_15515483.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelosinus
fermentans B4]
gi|421058665|ref|ZP_15521332.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans B3]
gi|421066386|ref|ZP_15528000.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A12]
gi|421070550|ref|ZP_15531682.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A11]
gi|392443225|gb|EIW20776.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelosinus
fermentans B4]
gi|392448176|gb|EIW25379.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A11]
gi|392456193|gb|EIW32947.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans DSM 17108]
gi|392456278|gb|EIW33029.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A12]
gi|392460320|gb|EIW36635.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans B3]
Length = 201
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G +V L++A+ L+L+ ED EK I++YINS G G
Sbjct: 19 DIFSRLLKDRIIFIGGPIDDNVANLVIAQLLFLESEDPEKDIHVYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G+A ALLL AGAKG R ALP + IMI Q
Sbjct: 71 VTAGLAIYDTMQYIKPDVSTICLGSAASMGALLLTAGAKGKRYALPYARIMIHQ 124
>gi|340751561|ref|ZP_08688371.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
mortiferum ATCC 9817]
gi|229420526|gb|EEO35573.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
mortiferum ATCC 9817]
Length = 191
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V I+A+ L+L+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPEKDIIMYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A ALLL AGAKG R AL S IMI Q
Sbjct: 70 VTAGMAIYDTMNYIKPDVQTVCIGQAASMGALLLSAGAKGKRFALEHSRIMIHQ 123
>gi|195051114|ref|XP_001993036.1| GH13604 [Drosophila grimshawi]
gi|193900095|gb|EDV98961.1| GH13604 [Drosophila grimshawi]
Length = 255
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 79/142 (55%), Gaps = 9/142 (6%)
Query: 68 CKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLY 126
C ++P S +IP T + D+ S L K RI+ L + ++ ++A+ L+
Sbjct: 17 CSTQPLSVRGINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLF 76
Query: 127 LQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAAL 186
LQ E+V KPI+LYINS G G T AIYD M YVKPPI T CVG A +L
Sbjct: 77 LQSENVNKPIHLYINSPG--------GVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSL 128
Query: 187 LLGAGAKGNRAALPSSTIMIKQ 208
LL AGA G R +LP++ IMI Q
Sbjct: 129 LLAAGAPGMRYSLPNARIMIHQ 150
>gi|334134662|ref|ZP_08508166.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
gi|333607817|gb|EGL19127.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
Length = 195
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + V I+A+ L+L+ ED +K I LYINS G G
Sbjct: 20 DIYSRLLKDRIVFLGAAIDDQVANSIIAQLLFLEAEDPQKEISLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ FAIYD M VKPP+ T+C G A AA+LL AG KG R ALP+S IMI Q
Sbjct: 72 TSAGFAIYDAMQLVKPPVHTICTGFAASFAAILLLAGEKGKRFALPNSEIMIHQ 125
>gi|376295039|ref|YP_005166269.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
desulfuricans ND132]
gi|323457600|gb|EGB13465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
desulfuricans ND132]
Length = 202
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 77 ITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
I MVI T T + D+ S L K+RI+ LG + V LI A+ L+L+ ED EK I
Sbjct: 4 IPMVIETTGRT---ERAYDIYSRLLKDRIILLGTAIDDHVASLICAQLLFLESEDPEKEI 60
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
Y+YINS G G T AIYD M Y+ P+ TLC+G A A+LLL AG KG R
Sbjct: 61 YMYINSPG--------GVVTSGMAIYDTMQYISAPVATLCMGQAASMASLLLCAGEKGMR 112
Query: 197 AALPSSTIMIKQ 208
+LP S I+I Q
Sbjct: 113 YSLPHSRILIHQ 124
>gi|224475912|ref|YP_002633518.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
carnosus subsp. carnosus TM300]
gi|254763800|sp|B9DJL4.1|CLPP_STACT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|222420519|emb|CAL27333.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 194
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|428213615|ref|YP_007086759.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
gi|428001996|gb|AFY82839.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
Length = 201
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV+LG + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRDRIVFLGQQVDADLANLIVAQLLFLEAEDAEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P + T+C+G A A LL AGAKG R +LP S IMI Q
Sbjct: 69 VTAGMGIFDTMNHIRPDVSTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
>gi|444912991|ref|ZP_21233148.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
gi|444716404|gb|ELW57255.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
Length = 205
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V +I+++ L+L+ ED +K I LYINS G G
Sbjct: 21 DIYSRLLKDRIVMLGTEIDDDVANVIVSQLLFLESEDPDKDINLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKP + T+CVG A A+LL AGAKG R ALPSS IMI Q
Sbjct: 73 VTAGLAIYDTMQYVKPNVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQ 126
>gi|373457870|ref|ZP_09549637.1| ATP-dependent Clp protease proteolytic subunit [Caldithrix abyssi
DSM 13497]
gi|371719534|gb|EHO41305.1| ATP-dependent Clp protease proteolytic subunit [Caldithrix abyssi
DSM 13497]
Length = 206
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 76/134 (56%), Gaps = 11/134 (8%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P++ +VI T + D+ S L K RIV+LG +V LI+++ L+L+ ED K
Sbjct: 2 PLVPIVI---EQTGRSERAYDIYSRLLKERIVFLGTPIDDNVASLIISQLLFLEAEDPTK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
IYLYINS G G + AIYD M Y+KP + T C+G A A+LL AGAKG
Sbjct: 59 DIYLYINSPG--------GIVSSGLAIYDTMRYIKPDVVTTCMGQAASMGAVLLAAGAKG 110
Query: 195 NRAALPSSTIMIKQ 208
R ALP + IMI Q
Sbjct: 111 KRYALPHARIMIHQ 124
>gi|359689539|ref|ZP_09259540.1| ATP-dependent Clp protease proteolytic subunit [Leptospira
licerasiae serovar Varillal str. MMD0835]
gi|418749517|ref|ZP_13305805.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae str. MMD4847]
gi|418759173|ref|ZP_13315353.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|384113664|gb|EID99928.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|404274402|gb|EJZ41720.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae str. MMD4847]
Length = 197
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 10/121 (8%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + +I+A+ L+L E+ ++ IYLY+NS G GY
Sbjct: 19 DVFSRLLKDRIIFLGDAISDDYANVIIAQLLFLDAENPDRDIYLYLNSPG--------GY 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ--AGDT 212
+ AIYD M Y+K + TLC+G A AALLL GAKG R+ALP S IM+ Q G T
Sbjct: 71 VSSGLAIYDTMQYIKADVRTLCIGQASSMAALLLAGGAKGKRSALPHSRIMMHQPTGGAT 130
Query: 213 G 213
G
Sbjct: 131 G 131
>gi|297616502|ref|YP_003701661.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophothermus lipocalidus DSM 12680]
gi|297144339|gb|ADI01096.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Syntrophothermus lipocalidus DSM 12680]
Length = 203
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG V LI+A+FL+L+ ED +K I+ YINS G G
Sbjct: 23 DIYSRLLKDRIVFLGSPIDDQVANLIIAQFLFLEAEDPDKDIHFYINSPG--------GS 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AI+D M Y++P + T+CVG A A LL AGAKG R ALP+S IMI Q
Sbjct: 75 ISAGMAIFDTMQYLRPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQ 128
>gi|365873788|ref|ZP_09413321.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio velox DSM 12556]
gi|363983875|gb|EHM10082.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio velox DSM 12556]
Length = 194
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 77/133 (57%), Gaps = 9/133 (6%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ +IP+ T + D+ S L K+RI+++G + L++A+ L+L+ ED +K
Sbjct: 1 MSYLIPYVIEQTGRGERSYDIYSRLLKDRIIFIGQEIDDHLANLVVAQLLFLESEDPDKD 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
+YLYINS G G T AIYD M Y+K P+ T+C G A AA+LL AG +G
Sbjct: 61 VYLYINSPG--------GVVTAGLAIYDTMQYIKCPVSTICTGQAASMAAVLLAAGERGK 112
Query: 196 RAALPSSTIMIKQ 208
R +LP S IMI Q
Sbjct: 113 RISLPHSRIMIHQ 125
>gi|195434156|ref|XP_002065069.1| GK15263 [Drosophila willistoni]
gi|194161154|gb|EDW76055.1| GK15263 [Drosophila willistoni]
Length = 255
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 68 CKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLY 126
C S+ S +IP T + D+ S L K RI+ L + ++ ++A+ L+
Sbjct: 17 CASRANSVRGINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLF 76
Query: 127 LQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAAL 186
LQ E+V KPI+LYINS G G T AIYD M YVKPPI T CVG A +L
Sbjct: 77 LQSENVNKPIHLYINSPG--------GVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSL 128
Query: 187 LLGAGAKGNRAALPSSTIMIKQ 208
LL AGA G R +LP++ IMI Q
Sbjct: 129 LLAAGAPGMRYSLPNARIMIHQ 150
>gi|195146760|ref|XP_002014352.1| GL19149 [Drosophila persimilis]
gi|194106305|gb|EDW28348.1| GL19149 [Drosophila persimilis]
Length = 253
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI Q
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQ 150
>gi|386319889|ref|YP_006016052.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pseudintermedius ED99]
gi|323465060|gb|ADX77213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pseudintermedius ED99]
Length = 195
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|198461900|ref|XP_001352265.2| GA18618 [Drosophila pseudoobscura pseudoobscura]
gi|198142480|gb|EAL29303.2| GA18618 [Drosophila pseudoobscura pseudoobscura]
Length = 253
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI Q
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQ 150
>gi|73663232|ref|YP_302013.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|418576800|ref|ZP_13140932.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
gi|124013830|sp|Q49VZ2.1|CLPP_STAS1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|72495747|dbj|BAE19068.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|379324465|gb|EHY91611.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
Length = 194
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|302390303|ref|YP_003826124.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
gi|302200931|gb|ADL08501.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
Length = 200
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++G S+ L++A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRIVFIGTPIDDSIASLVIAQLLFLESEDPDKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A+LL GA G R ALP+S IMI Q
Sbjct: 71 VTAGLAIYDTMQYIKPDVSTICIGMAASMGAVLLAGGAPGKRLALPNSRIMIHQ 124
>gi|227486247|ref|ZP_03916563.1| endopeptidase Clp [Anaerococcus lactolyticus ATCC 51172]
gi|227235658|gb|EEI85673.1| endopeptidase Clp [Anaerococcus lactolyticus ATCC 51172]
Length = 205
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++L V+++I+A+ L+L+ ED K I+ YINS G G
Sbjct: 30 DIYSRLLKDRIIFLSGEVRDEVSDIIIAQLLFLESEDPNKDIHFYINSPG--------GV 81
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A+LL +GAKG R +LP+S IMI Q
Sbjct: 82 VTSGLAIYDTMNYIKPDVSTICIGQAASMGAVLLSSGAKGKRFSLPNSNIMIHQ 135
>gi|253681101|ref|ZP_04861904.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|331270305|ref|YP_004396797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
gi|416350488|ref|ZP_11680890.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum C str. Stockholm]
gi|253562950|gb|EES92396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|329126855|gb|AEB76800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
gi|338196268|gb|EGO88472.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum C str. Stockholm]
Length = 195
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG L++A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQ 124
>gi|168186116|ref|ZP_02620751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
gi|169296133|gb|EDS78266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
Length = 195
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG L++A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQ 124
>gi|452943368|ref|YP_007499533.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. HO]
gi|452881786|gb|AGG14490.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. HO]
Length = 205
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 78/143 (54%), Gaps = 17/143 (11%)
Query: 71 KPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFL 125
K +I ++P EQ P D+ S L ++RIV LG V LI+A+ L
Sbjct: 5 KDYQRIIDQLVPIV----VEQTPRGERAYDIYSRLLQDRIVILGFPIDDHVANLIVAQLL 60
Query: 126 YLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAA 185
+L+ +D EK I +YINS G G T AIYD M Y+KP + T+C+G A A
Sbjct: 61 FLEAQDPEKDIQMYINSPG--------GSVTAGLAIYDTMQYIKPDVTTICIGQAASMGA 112
Query: 186 LLLGAGAKGNRAALPSSTIMIKQ 208
+LL AGAKG R ALP++ IMI Q
Sbjct: 113 VLLAAGAKGKRFALPNARIMIHQ 135
>gi|313894919|ref|ZP_07828479.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 137 str. F0430]
gi|402301976|ref|ZP_10821097.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC9]
gi|312976600|gb|EFR42055.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 137 str. F0430]
gi|400381261|gb|EJP34064.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC9]
Length = 205
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A ++LL AGAKG R ALP + IMI Q
Sbjct: 72 VTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQ 125
>gi|319891770|ref|YP_004148645.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
pseudintermedius HKU10-03]
gi|317161466|gb|ADV05009.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
pseudintermedius HKU10-03]
Length = 195
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|399888212|ref|ZP_10774089.1| ATP-dependent Clp protease proteolytic subunit [Clostridium arbusti
SL206]
Length = 194
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + LI+A+ L+L+ ED +K I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEDVNDTTASLIVAQLLFLESEDPDKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLTAGAKGKRFALPNSEIMIHQ 124
>gi|195473623|ref|XP_002089092.1| GE18928 [Drosophila yakuba]
gi|194175193|gb|EDW88804.1| GE18928 [Drosophila yakuba]
Length = 253
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 68 CKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLY 126
C S+ S +IP T + D+ S L K RI+ L + ++ ++A+ L+
Sbjct: 17 CGSRANSVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLF 76
Query: 127 LQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAAL 186
LQ E+V KPI+LYINS G G T AIYD M YVKPPI T CVG A +L
Sbjct: 77 LQSENVNKPIHLYINSPG--------GVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSL 128
Query: 187 LLGAGAKGNRAALPSSTIMIKQ 208
LL AGA G R +LP++ IMI Q
Sbjct: 129 LLAAGAPGMRYSLPNARIMIHQ 150
>gi|94958239|gb|ABF47251.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
xylosus]
Length = 194
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|392971446|ref|ZP_10336842.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
equorum subsp. equorum Mu2]
gi|403047222|ref|ZP_10902690.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus sp.
OJ82]
gi|392510838|emb|CCI60118.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
equorum subsp. equorum Mu2]
gi|402762756|gb|EJX16850.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus sp.
OJ82]
Length = 194
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|383787009|ref|YP_005471578.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium pennivorans DSM 9078]
gi|383109856|gb|AFG35459.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium pennivorans DSM 9078]
Length = 206
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 78/140 (55%), Gaps = 9/140 (6%)
Query: 70 SKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
K ++ +P T + D+ S L K+RI++LG + V L++A+ L+L+
Sbjct: 4 DKEMKKILDQYVPIVIETTGRYERAYDIYSRLLKDRIIFLGSAIDDHVANLVVAQLLFLE 63
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ +K I LYINS G G T AIYD M YVK + T+C+G A AA+LL
Sbjct: 64 AENPDKDIQLYINSPG--------GLVTAGLAIYDTMQYVKCDVATICIGQAASMAAVLL 115
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
AGAKG R ALP+S IMI Q
Sbjct: 116 AAGAKGKRFALPNSRIMIHQ 135
>gi|290969192|ref|ZP_06560717.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
genomosp. type_1 str. 28L]
gi|335049502|ref|ZP_08542492.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Megasphaera sp. UPII 199-6]
gi|290780698|gb|EFD93301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
genomosp. type_1 str. 28L]
gi|333762762|gb|EGL40247.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Megasphaera sp. UPII 199-6]
Length = 200
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 78/133 (58%), Gaps = 9/133 (6%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++M +P T+ + DL S L K+RI++L ++ ++A+ L+L+ ED +K
Sbjct: 1 MSMYVPVVVEQTSQGERSYDLYSRLMKDRIIFLSGQVEDTMANSLIAQLLFLEAEDPDKD 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINS G G T AIYD M Y+KP + T+CVG+A A++LL AG KG
Sbjct: 61 IYLYINSPG--------GVVTAGMAIYDTMQYIKPDVSTICVGSAASMASVLLAAGTKGK 112
Query: 196 RAALPSSTIMIKQ 208
R ALP S +MI Q
Sbjct: 113 RFALPHSQVMIHQ 125
>gi|317153552|ref|YP_004121600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
aespoeensis Aspo-2]
gi|316943803|gb|ADU62854.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
aespoeensis Aspo-2]
Length = 202
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 77 ITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
I MVI T T + D+ S L K+RI+ L + V LI A+ L+L+ ED EK I
Sbjct: 4 IPMVIETTGRT---ERAYDIYSRLLKDRIILLSSAIDDHVASLICAQLLFLESEDPEKEI 60
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
Y+YINS G G + AIYD M Y+ P+ TLC+G A ALLL AGA+G R
Sbjct: 61 YMYINSPG--------GVVSAGMAIYDTMQYISAPVSTLCLGQAASMGALLLAAGAQGMR 112
Query: 197 AALPSSTIMIKQ 208
ALP S IMI Q
Sbjct: 113 YALPHSRIMIHQ 124
>gi|194761774|ref|XP_001963100.1| GF15771 [Drosophila ananassae]
gi|190616797|gb|EDV32321.1| GF15771 [Drosophila ananassae]
Length = 252
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI Q
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQ 150
>gi|383454037|ref|YP_005368026.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
gi|380732364|gb|AFE08366.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
Length = 206
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V I+A+ L+L+ ED +K I LYINS G G
Sbjct: 21 DIYSRLLKDRIVMLGTEIDDDVANAIVAQLLFLESEDPDKDINLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVK P+ T+CVG A A+LL AGAKG R +LPSS IMI Q
Sbjct: 73 VTAGLAIYDTMQYVKAPVSTICVGQAASMGAVLLLAGAKGKRYSLPSSRIMIHQ 126
>gi|385784973|ref|YP_005761146.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis N920143]
gi|339895229|emb|CCB54551.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus lugdunensis N920143]
Length = 195
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDFEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|15616126|ref|NP_244431.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
gi|11386690|sp|Q9K709.1|CLPP1_BACHD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|10176188|dbj|BAB07283.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
Length = 194
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+A+ L+LQ ED +K I LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGTAIDDNVANSIVAQLLFLQAEDPDKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL AGAKG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQYIKPNVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQ 124
>gi|70727122|ref|YP_254036.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
haemolyticus JCSC1435]
gi|124013829|sp|Q4L4J5.1|CLPP_STAHJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|68447846|dbj|BAE05430.1| clpP [Staphylococcus haemolyticus JCSC1435]
Length = 195
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|262199481|ref|YP_003270690.1| endopeptidase Clp [Haliangium ochraceum DSM 14365]
gi|262082828|gb|ACY18797.1| Endopeptidase Clp [Haliangium ochraceum DSM 14365]
Length = 202
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG V +I A+ LYL+ ED EK I LYINS G G
Sbjct: 26 DIYSRLLKDRIVFLGTEVNDDVANMITAQLLYLESEDAEKEIMLYINSPG--------GS 77
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M +++ P+ T+CVG A ALLL AG+ G R +LP+S IMI Q
Sbjct: 78 VTAGMAIYDTMQHIRCPVATVCVGQAASMGALLLAAGSAGLRRSLPNSRIMIHQ 131
>gi|160902469|ref|YP_001568050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Petrotoga
mobilis SJ95]
gi|160360113|gb|ABX31727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Petrotoga
mobilis SJ95]
Length = 205
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG V +I+A+ L+L+ +D +K I+LYINS G G
Sbjct: 20 DIYSRLLKDRIVFLGTPINDDVANVIIAQLLFLESQDPDKDIFLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T IYD M YVKP I T+C+G A A+LL AGAKG R +LP S IMI Q
Sbjct: 72 VTSGLGIYDTMQYVKPDISTICIGQAASMGAVLLAAGAKGKRYSLPYSRIMIHQ 125
>gi|194859835|ref|XP_001969460.1| GG10114 [Drosophila erecta]
gi|190661327|gb|EDV58519.1| GG10114 [Drosophila erecta]
Length = 253
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI Q
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQ 150
>gi|404417286|ref|ZP_10999088.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
arlettae CVD059]
gi|403490299|gb|EJY95842.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
arlettae CVD059]
Length = 194
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLSAGAKGKRFALPNAEVMIHQ 124
>gi|115374393|ref|ZP_01461676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|310824399|ref|YP_003956757.1| ATP-dependent CLP protease proteolytic subunit 2 [Stigmatella
aurantiaca DW4/3-1]
gi|115368595|gb|EAU67547.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|309397471|gb|ADO74930.1| ATP-dependent Clp protease proteolytic subunit 2 [Stigmatella
aurantiaca DW4/3-1]
Length = 200
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 77/131 (58%), Gaps = 9/131 (6%)
Query: 79 MVIPFTSGTAWE-QPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M IPF T+ + DL S L K+RI+ LG+ V +++A+ L+L+ ED EK I
Sbjct: 1 MNIPFVIETSHRGERAYDLYSRLLKDRIIMLGVPINDEVANVVVAQMLFLESEDPEKGIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
+YINS G G T AIYD M YVK P+ T+CVG A ALLL AG+KG R
Sbjct: 61 IYINSPG--------GSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGSKGKRY 112
Query: 198 ALPSSTIMIKQ 208
ALP++ IMI Q
Sbjct: 113 ALPNARIMIHQ 123
>gi|392407107|ref|YP_006443715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
mobile DSM 13181]
gi|390620243|gb|AFM21390.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
mobile DSM 13181]
Length = 192
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T + D+ S L K+RI++LG + L++A+ L+L+ ED +K I
Sbjct: 1 MLVPIVIEQTGRGERAYDIYSRLLKDRIIFLGDVIEDHIANLVVAQMLFLESEDPDKDIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T IYD M Y+K PI T+CVG A AA+LL AG KG R
Sbjct: 61 LYINSPG--------GSVTAGLGIYDTMQYIKCPISTICVGQAASMAAVLLAAGTKGKRI 112
Query: 198 ALPSSTIMIKQ 208
ALP+S +M+ Q
Sbjct: 113 ALPNSRVMLHQ 123
>gi|189219051|ref|YP_001939692.1| ATP-dependent Clp protease proteolytic subunit [Methylacidiphilum
infernorum V4]
gi|189185909|gb|ACD83094.1| ATP-dependent Clp protease proteolytic subunit [Methylacidiphilum
infernorum V4]
Length = 219
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 79/136 (58%), Gaps = 9/136 (6%)
Query: 74 SPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
SP+I+ VIP T + D+ S L K+RIV++G ++ L++A+ L+LQ ED
Sbjct: 6 SPIISQVIPMVVEQTGRGERGYDIFSRLLKDRIVFIGTPIDDNMANLVIAQLLFLQMEDP 65
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
+K I LYI+S G GY T AIYD M ++ + T C+G A AA+LL AG
Sbjct: 66 KKDINLYIHSPG--------GYVTAGMAIYDTMQFLSCDVNTYCIGQAASMAAVLLAAGT 117
Query: 193 KGNRAALPSSTIMIKQ 208
KG R ALP++ IMI Q
Sbjct: 118 KGKRFALPNARIMIHQ 133
>gi|407691666|ref|YP_006816455.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus suis
H91-0380]
gi|407387723|gb|AFU18216.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus suis
H91-0380]
Length = 196
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 73/133 (54%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
VI MV+ TS + D+ S L K RI++L + LI+A+ L+L+ ED EK
Sbjct: 3 VIPMVVEQTSKG---ERSYDIYSRLLKERIIFLNGEVEDHMANLIVAQLLFLESEDPEKD 59
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINS G G T AIYD M ++KP + TLC G A A LL GAKG
Sbjct: 60 IYLYINSPG--------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGK 111
Query: 196 RAALPSSTIMIKQ 208
R ALP + +MI Q
Sbjct: 112 RFALPHARVMIHQ 124
>gi|238018907|ref|ZP_04599333.1| hypothetical protein VEIDISOL_00767 [Veillonella dispar ATCC 17748]
gi|237864391|gb|EEP65681.1| hypothetical protein VEIDISOL_00767 [Veillonella dispar ATCC 17748]
Length = 197
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V ++A+ L+L+ ED +K I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG+A A+LL AGAKG R ALP + +MI Q
Sbjct: 70 VTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGAKGKRYALPHARVMIHQ 123
>gi|222150769|ref|YP_002559922.1| ATP-dependent Clp protease proteolytic subunit [Macrococcus
caseolyticus JCSC5402]
gi|254763793|sp|B9EAG5.1|CLPP_MACCJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|222119891|dbj|BAH17226.1| ATP-dependent protease proteolytic subunit ClpP [Macrococcus
caseolyticus JCSC5402]
Length = 194
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGMAIYDTMQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|342731984|ref|YP_004770823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|384455401|ref|YP_005667995.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|417962125|ref|ZP_12604399.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-2]
gi|417963799|ref|ZP_12605667.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-3]
gi|417967677|ref|ZP_12608746.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-co]
gi|418016623|ref|ZP_12656188.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|418372234|ref|ZP_12964326.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-SU]
gi|342329439|dbj|BAK56081.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|345506958|gb|EGX29252.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|346983743|dbj|BAK79419.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|380331068|gb|EIA22177.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-2]
gi|380331769|gb|EIA22747.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-3]
gi|380340900|gb|EIA29436.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-co]
gi|380341903|gb|EIA30348.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-SU]
Length = 194
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T+ + D+ S L K RI++LG L++A+ L+L+ ED +K I+LYINS G
Sbjct: 11 TSKGERSYDIYSRLLKERIIFLGDEVNDVTASLVVAQLLFLESEDTDKDIHLYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M Y+KP + T+C+G A A LL +GAKG R ALP+S IMI
Sbjct: 69 ------GSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFALPNSEIMI 122
Query: 207 KQ 208
Q
Sbjct: 123 HQ 124
>gi|313673004|ref|YP_004051115.1| ATP-dependent clp protease proteolytic subunit clpp
[Calditerrivibrio nitroreducens DSM 19672]
gi|312939760|gb|ADR18952.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Calditerrivibrio nitroreducens DSM 19672]
Length = 195
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + +V I+A+ L+L+ ED +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGTAIDDTVANSIVAQMLFLEAEDPKKDIYLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AI+D M Y+KP + T+C+G A A+LL GAKG R ALP++ IMI Q
Sbjct: 72 ITSGLAIFDTMNYIKPDVSTICIGQAASMGAVLLACGAKGKRFALPNTRIMIHQ 125
>gi|289551370|ref|YP_003472274.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis HKU09-01]
gi|315658877|ref|ZP_07911744.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis M23590]
gi|418415755|ref|ZP_12988958.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis ACS-027-V-Sch2]
gi|418636869|ref|ZP_13199207.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus lugdunensis VCU139]
gi|289180901|gb|ADC88146.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis HKU09-01]
gi|315496001|gb|EFU84329.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis M23590]
gi|374840430|gb|EHS03924.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus lugdunensis VCU139]
gi|410873613|gb|EKS21547.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis ACS-027-V-Sch2]
Length = 195
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|418632534|ref|ZP_13194964.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU128]
gi|374832104|gb|EHR95824.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU128]
Length = 194
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIHHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|116747551|ref|YP_844238.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Syntrophobacter fumaroxidans MPOB]
gi|166214718|sp|A0LEF1.1|CLPP_SYNFM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116696615|gb|ABK15803.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophobacter fumaroxidans MPOB]
Length = 202
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI++LG + V +I+A+ L+L+ ED +K I+ YINS G G
Sbjct: 19 DIYSRLLRDRIIFLGTAITDEVANVIIAQLLFLESEDPDKDIHFYINSPG--------GL 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + TLC+G A AA+LL AG KG R ALP IM+ Q
Sbjct: 71 VTAGLAIYDTMQFIKPNVSTLCMGQAASMAAILLAAGVKGKRYALPHVRIMLHQ 124
>gi|289523086|ref|ZP_06439940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503629|gb|EFD24793.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 194
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 77/133 (57%), Gaps = 9/133 (6%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+ M++P T + D+ S L K+RI++LG + L++A+ L+L+ ED +K
Sbjct: 1 MKMLVPIVIEQTGRGERAYDIYSRLLKDRIIFLGDVIEEHLANLVVAQMLFLESEDPDKD 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I LYINS G G T IYD M Y+K P+ T+CVG A AA+LL AGAKG
Sbjct: 61 INLYINSPG--------GSVTAGLGIYDTMQYIKCPVSTICVGQAASMAAVLLAAGAKGK 112
Query: 196 RAALPSSTIMIKQ 208
R ALP+S +M+ Q
Sbjct: 113 RIALPNSRVMLHQ 125
>gi|195384926|ref|XP_002051163.1| GJ13731 [Drosophila virilis]
gi|194147620|gb|EDW63318.1| GJ13731 [Drosophila virilis]
Length = 254
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI Q
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQ 150
>gi|345531825|pdb|3ST9|A Chain A, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531826|pdb|3ST9|B Chain B, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531827|pdb|3ST9|C Chain C, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531828|pdb|3ST9|D Chain D, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531829|pdb|3ST9|E Chain E, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531830|pdb|3ST9|F Chain F, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531831|pdb|3ST9|G Chain G, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531832|pdb|3STA|V Chain V, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531833|pdb|3STA|A Chain A, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531834|pdb|3STA|B Chain B, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531835|pdb|3STA|C Chain C, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531836|pdb|3STA|E Chain E, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531837|pdb|3STA|F Chain F, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531838|pdb|3STA|G Chain G, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531839|pdb|3STA|I Chain I, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531840|pdb|3STA|K Chain K, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531841|pdb|3STA|L Chain L, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531842|pdb|3STA|M Chain M, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531843|pdb|3STA|N Chain N, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531844|pdb|3STA|S Chain S, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531845|pdb|3STA|T Chain T, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
Length = 197
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 21 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 73 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 126
>gi|303229413|ref|ZP_07316203.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-134-V-Col7a]
gi|303231336|ref|ZP_07318070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-049-V-Sch6]
gi|401680587|ref|ZP_10812502.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. ACP1]
gi|429760069|ref|ZP_19292559.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella atypica KON]
gi|302513932|gb|EFL55940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-049-V-Sch6]
gi|302515949|gb|EFL57901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-134-V-Col7a]
gi|400218495|gb|EJO49375.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. ACP1]
gi|429178474|gb|EKY19752.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella atypica KON]
Length = 197
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V ++A+ L+L+ ED +K I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG+A A+LL AGAKG R ALP + +MI Q
Sbjct: 70 VTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGAKGKRFALPHARVMIHQ 123
>gi|27467469|ref|NP_764106.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57866412|ref|YP_188029.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis RP62A]
gi|242242138|ref|ZP_04796583.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis W23144]
gi|251810202|ref|ZP_04824675.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|282875651|ref|ZP_06284522.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis SK135]
gi|293368230|ref|ZP_06614859.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|416124873|ref|ZP_11595668.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis FRI909]
gi|417647658|ref|ZP_12297492.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU144]
gi|417656247|ref|ZP_12305934.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU028]
gi|417658376|ref|ZP_12308010.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU045]
gi|417910192|ref|ZP_12553919.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU037]
gi|417911815|ref|ZP_12555515.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU105]
gi|417914206|ref|ZP_12557859.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU109]
gi|418326030|ref|ZP_12937226.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU071]
gi|418329732|ref|ZP_12940785.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis 14.1.R1.SE]
gi|418411293|ref|ZP_12984561.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BVS058A4]
gi|418604876|ref|ZP_13168211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU041]
gi|418608483|ref|ZP_13171678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU057]
gi|418608689|ref|ZP_13171871.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU065]
gi|418611518|ref|ZP_13174598.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU117]
gi|418614099|ref|ZP_13177086.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU118]
gi|418618003|ref|ZP_13180887.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU120]
gi|418622588|ref|ZP_13185333.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU123]
gi|418623648|ref|ZP_13186350.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU125]
gi|418626020|ref|ZP_13188648.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU126]
gi|418629665|ref|ZP_13192161.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU127]
gi|418633713|ref|ZP_13196119.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU129]
gi|418665858|ref|ZP_13227295.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU081]
gi|419768236|ref|ZP_14294368.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-250]
gi|419771145|ref|ZP_14297205.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-K]
gi|420162870|ref|ZP_14669625.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM095]
gi|420166724|ref|ZP_14673405.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM088]
gi|420167312|ref|ZP_14673973.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM087]
gi|420171404|ref|ZP_14677946.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM070]
gi|420172098|ref|ZP_14678613.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM067]
gi|420175404|ref|ZP_14681842.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM061]
gi|420176672|ref|ZP_14683079.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM057]
gi|420180409|ref|ZP_14686641.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM053]
gi|420182492|ref|ZP_14688628.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM049]
gi|420185937|ref|ZP_14692013.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM040]
gi|420187913|ref|ZP_14693928.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM039]
gi|420189984|ref|ZP_14695932.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM037]
gi|420193132|ref|ZP_14698987.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM023]
gi|420195431|ref|ZP_14701223.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM021]
gi|420197784|ref|ZP_14703505.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM020]
gi|420199727|ref|ZP_14705398.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM031]
gi|420201234|ref|ZP_14706859.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM018]
gi|420203772|ref|ZP_14709333.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM015]
gi|420206801|ref|ZP_14712306.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM008]
gi|420208208|ref|ZP_14713678.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM003]
gi|420212385|ref|ZP_14717736.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM001]
gi|420213579|ref|ZP_14718885.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05005]
gi|420216619|ref|ZP_14721823.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05001]
gi|420219555|ref|ZP_14724570.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04008]
gi|420222322|ref|ZP_14727243.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH08001]
gi|420225248|ref|ZP_14730082.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH06004]
gi|420226678|ref|ZP_14731457.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05003]
gi|420228998|ref|ZP_14733709.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04003]
gi|420231355|ref|ZP_14736007.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051668]
gi|420233994|ref|ZP_14738568.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051475]
gi|421607631|ref|ZP_16048869.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis AU12-03]
gi|38257586|sp|Q8CTE0.1|CLPP_STAES RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460168|sp|Q5HQW0.1|CLPP_STAEQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|27315012|gb|AAO04148.1|AE016745_247 ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57637070|gb|AAW53858.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis RP62A]
gi|242234451|gb|EES36763.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis W23144]
gi|251806254|gb|EES58911.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295678|gb|EFA88201.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis SK135]
gi|291317653|gb|EFE58070.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|319401155|gb|EFV89370.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis FRI909]
gi|329723271|gb|EGG59801.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU144]
gi|329736698|gb|EGG72963.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU028]
gi|329738003|gb|EGG74227.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU045]
gi|341651029|gb|EGS74836.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU037]
gi|341652326|gb|EGS76115.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU105]
gi|341653290|gb|EGS77061.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU109]
gi|365226941|gb|EHM68152.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU071]
gi|365229855|gb|EHM70983.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis 14.1.R1.SE]
gi|374401382|gb|EHQ72456.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU057]
gi|374403769|gb|EHQ74765.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU041]
gi|374407975|gb|EHQ78819.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU081]
gi|374409868|gb|EHQ80637.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU065]
gi|374817066|gb|EHR81256.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU120]
gi|374821672|gb|EHR85724.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU118]
gi|374822416|gb|EHR86438.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU117]
gi|374826344|gb|EHR90243.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU123]
gi|374829958|gb|EHR93749.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU125]
gi|374833196|gb|EHR96891.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU127]
gi|374834043|gb|EHR97705.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU126]
gi|374838660|gb|EHS02198.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU129]
gi|383360447|gb|EID37843.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-250]
gi|383362116|gb|EID39473.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-K]
gi|394233097|gb|EJD78707.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM088]
gi|394235867|gb|EJD81417.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM095]
gi|394238050|gb|EJD83534.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM070]
gi|394238941|gb|EJD84398.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM087]
gi|394243339|gb|EJD88705.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM061]
gi|394243569|gb|EJD88931.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM067]
gi|394250037|gb|EJD95239.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM049]
gi|394250752|gb|EJD95922.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM053]
gi|394252238|gb|EJD97276.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM057]
gi|394253029|gb|EJD98045.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM040]
gi|394255555|gb|EJE00504.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM039]
gi|394259277|gb|EJE04135.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM037]
gi|394260255|gb|EJE05070.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM023]
gi|394263226|gb|EJE07965.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM021]
gi|394265370|gb|EJE10027.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM020]
gi|394271477|gb|EJE15970.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM031]
gi|394273140|gb|EJE17575.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM018]
gi|394274354|gb|EJE18775.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM015]
gi|394276904|gb|EJE21237.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM008]
gi|394279819|gb|EJE24116.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM001]
gi|394282082|gb|EJE26294.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM003]
gi|394285155|gb|EJE29239.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05005]
gi|394288813|gb|EJE32713.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04008]
gi|394289374|gb|EJE33258.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH08001]
gi|394291646|gb|EJE35441.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05001]
gi|394293803|gb|EJE37505.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH06004]
gi|394298294|gb|EJE41871.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05003]
gi|394299681|gb|EJE43216.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04003]
gi|394302921|gb|EJE46355.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051668]
gi|394304687|gb|EJE48083.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051475]
gi|406656682|gb|EKC83083.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis AU12-03]
gi|410892837|gb|EKS40628.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BVS058A4]
Length = 194
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|15923758|ref|NP_371292.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus Mu50]
gi|15926445|ref|NP_373978.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus N315]
gi|21282459|ref|NP_645547.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MW2]
gi|49483025|ref|YP_040249.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MRSA252]
gi|49485640|ref|YP_042861.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57650109|ref|YP_185707.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus COL]
gi|82750474|ref|YP_416215.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus RF122]
gi|87161484|ref|YP_493453.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|88194551|ref|YP_499347.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus NCTC 8325]
gi|148267228|ref|YP_001246171.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JH9]
gi|150393277|ref|YP_001315952.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JH1]
gi|151220948|ref|YP_001331770.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156979096|ref|YP_001441355.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus Mu3]
gi|161509038|ref|YP_001574697.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|221141842|ref|ZP_03566335.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253317258|ref|ZP_04840471.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|253731397|ref|ZP_04865562.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253732783|ref|ZP_04866948.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|255005559|ref|ZP_05144160.2| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257424888|ref|ZP_05601315.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427556|ref|ZP_05603955.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430187|ref|ZP_05606571.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397]
gi|257432888|ref|ZP_05609248.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus E1410]
gi|257435792|ref|ZP_05611840.1| clp protease [Staphylococcus aureus subsp. aureus M876]
gi|257794910|ref|ZP_05643889.1| clp protease [Staphylococcus aureus A9781]
gi|258418226|ref|ZP_05682491.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A9763]
gi|258421524|ref|ZP_05684449.1| clp protease [Staphylococcus aureus A9719]
gi|258423417|ref|ZP_05686308.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9635]
gi|258439133|ref|ZP_05690177.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9299]
gi|258440939|ref|ZP_05690774.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A8115]
gi|258445769|ref|ZP_05693946.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6300]
gi|258449581|ref|ZP_05697683.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6224]
gi|258452184|ref|ZP_05700200.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5948]
gi|258453981|ref|ZP_05701953.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5937]
gi|262049552|ref|ZP_06022422.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30]
gi|262052698|ref|ZP_06024889.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3]
gi|269202390|ref|YP_003281659.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ED98]
gi|282895064|ref|ZP_06303285.1| Clp protease [Staphylococcus aureus A8117]
gi|282903398|ref|ZP_06311289.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus C160]
gi|282905178|ref|ZP_06313035.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908157|ref|ZP_06315988.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282910415|ref|ZP_06318219.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282913610|ref|ZP_06321399.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M899]
gi|282916110|ref|ZP_06323873.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
gi|282918561|ref|ZP_06326298.1| Clp protease [Staphylococcus aureus subsp. aureus C427]
gi|282922066|ref|ZP_06329763.1| Clp protease [Staphylococcus aureus A9765]
gi|282923527|ref|ZP_06331207.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282926635|ref|ZP_06334265.1| Clp protease [Staphylococcus aureus A10102]
gi|283769931|ref|ZP_06342823.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp.
aureus H19]
gi|283957600|ref|ZP_06375053.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus A017934/97]
gi|284023791|ref|ZP_06378189.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus 132]
gi|293500653|ref|ZP_06666504.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|293509601|ref|ZP_06668312.1| Clp protease [Staphylococcus aureus subsp. aureus M809]
gi|293524187|ref|ZP_06670874.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M1015]
gi|294850496|ref|ZP_06791225.1| Clp protease [Staphylococcus aureus A9754]
gi|295406492|ref|ZP_06816298.1| Clp protease [Staphylococcus aureus A8819]
gi|295427347|ref|ZP_06819982.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296276994|ref|ZP_06859501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MR1]
gi|297208504|ref|ZP_06924933.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297245218|ref|ZP_06929092.1| Clp protease [Staphylococcus aureus A8796]
gi|297590298|ref|ZP_06948937.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MN8]
gi|300912596|ref|ZP_07130039.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH70]
gi|304381609|ref|ZP_07364259.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|379014058|ref|YP_005290294.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VC40]
gi|379020540|ref|YP_005297202.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus M013]
gi|379795239|ref|YP_005325237.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|384547051|ref|YP_005736304.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ED133]
gi|384549630|ref|YP_005738882.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JKD6159]
gi|384861436|ref|YP_005744156.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|384864093|ref|YP_005749452.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|384868298|ref|YP_005748494.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH60]
gi|384869354|ref|YP_005752068.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus T0131]
gi|385781094|ref|YP_005757265.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 11819-97]
gi|386728536|ref|YP_006194919.1| ATP-dependent endopeptidase clp proteolytic subunit [Staphylococcus
aureus subsp. aureus 71193]
gi|386830410|ref|YP_006237064.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus HO 5096 0412]
gi|387142462|ref|YP_005730855.1| putative ATP-dependent Clp protease proteolyticsubunit
[Staphylococcus aureus subsp. aureus TW20]
gi|387149931|ref|YP_005741495.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 04-02981]
gi|387602124|ref|YP_005733645.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ST398]
gi|387779903|ref|YP_005754701.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus LGA251]
gi|404478169|ref|YP_006709599.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 08BA02176]
gi|415683595|ref|ZP_11448811.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS00]
gi|415689458|ref|ZP_11452760.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS01]
gi|415693848|ref|ZP_11455519.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS03]
gi|416842650|ref|ZP_11905104.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O11]
gi|416847874|ref|ZP_11907423.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O46]
gi|417650451|ref|ZP_12300222.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21189]
gi|417652532|ref|ZP_12302279.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21172]
gi|417655183|ref|ZP_12304897.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21193]
gi|417796631|ref|ZP_12443837.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21305]
gi|417798637|ref|ZP_12445797.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21310]
gi|417802514|ref|ZP_12449572.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21318]
gi|417887242|ref|ZP_12531375.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21195]
gi|417890528|ref|ZP_12534601.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21200]
gi|417892365|ref|ZP_12536415.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21201]
gi|417896583|ref|ZP_12540529.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21235]
gi|417898150|ref|ZP_12542074.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21259]
gi|417902321|ref|ZP_12546188.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21266]
gi|417904583|ref|ZP_12548405.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21269]
gi|418280847|ref|ZP_12893672.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21178]
gi|418283166|ref|ZP_12895922.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21202]
gi|418284347|ref|ZP_12897073.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21209]
gi|418308841|ref|ZP_12920432.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21194]
gi|418309577|ref|ZP_12921131.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21331]
gi|418313751|ref|ZP_12925236.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21334]
gi|418315200|ref|ZP_12926664.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21340]
gi|418318354|ref|ZP_12929759.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21232]
gi|418322160|ref|ZP_12933497.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus VCU006]
gi|418423914|ref|ZP_12997054.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS1]
gi|418426888|ref|ZP_12999909.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS2]
gi|418429820|ref|ZP_13002744.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS3a]
gi|418432714|ref|ZP_13005507.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS4]
gi|418436430|ref|ZP_13008239.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS5]
gi|418439328|ref|ZP_13011043.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS6]
gi|418442304|ref|ZP_13013916.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS7]
gi|418445435|ref|ZP_13016920.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS8]
gi|418448373|ref|ZP_13019772.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS9]
gi|418451192|ref|ZP_13022531.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS10]
gi|418454216|ref|ZP_13025483.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11a]
gi|418457120|ref|ZP_13028329.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11b]
gi|418561062|ref|ZP_13125562.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21252]
gi|418561317|ref|ZP_13125809.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21262]
gi|418565775|ref|ZP_13130170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21264]
gi|418566869|ref|ZP_13131236.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21272]
gi|418570534|ref|ZP_13134800.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21283]
gi|418574077|ref|ZP_13138254.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21333]
gi|418578667|ref|ZP_13142762.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1114]
gi|418581482|ref|ZP_13145563.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1605]
gi|418595736|ref|ZP_13159333.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21342]
gi|418598777|ref|ZP_13162284.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21343]
gi|418601712|ref|ZP_13165128.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21345]
gi|418639487|ref|ZP_13201734.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-3]
gi|418640943|ref|ZP_13203159.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-24]
gi|418644345|ref|ZP_13206491.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-55]
gi|418647139|ref|ZP_13209218.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-88]
gi|418650986|ref|ZP_13212997.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-91]
gi|418654288|ref|ZP_13216201.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-99]
gi|418656309|ref|ZP_13218123.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-105]
gi|418657987|ref|ZP_13219735.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-111]
gi|418660942|ref|ZP_13222548.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-122]
gi|418872430|ref|ZP_13426769.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-125]
gi|418874789|ref|ZP_13429055.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC93]
gi|418877613|ref|ZP_13431852.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1165]
gi|418880473|ref|ZP_13434693.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1213]
gi|418883398|ref|ZP_13437597.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1769]
gi|418886060|ref|ZP_13440210.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1150]
gi|418888666|ref|ZP_13442802.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1524]
gi|418891410|ref|ZP_13445527.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1176]
gi|418894225|ref|ZP_13448326.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1057]
gi|418897185|ref|ZP_13451258.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|418900155|ref|ZP_13454214.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1214]
gi|418903043|ref|ZP_13457084.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1770]
gi|418904859|ref|ZP_13458888.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|418908561|ref|ZP_13462569.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG149]
gi|418913957|ref|ZP_13467929.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|418916633|ref|ZP_13470594.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1267]
gi|418919641|ref|ZP_13473584.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC348]
gi|418922437|ref|ZP_13476354.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1233]
gi|418925006|ref|ZP_13478909.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG2018]
gi|418928091|ref|ZP_13481977.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1612]
gi|418930802|ref|ZP_13484650.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1750]
gi|418933703|ref|ZP_13487527.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC128]
gi|418948897|ref|ZP_13501177.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-157]
gi|418949913|ref|ZP_13502132.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-160]
gi|418952635|ref|ZP_13504651.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-189]
gi|418979235|ref|ZP_13527032.1| ClpP [Staphylococcus aureus subsp. aureus DR10]
gi|418981671|ref|ZP_13529386.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1242]
gi|418985309|ref|ZP_13532998.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1500]
gi|418987671|ref|ZP_13535344.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1835]
gi|418990658|ref|ZP_13538319.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1096]
gi|418993481|ref|ZP_13541118.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG290]
gi|419775511|ref|ZP_14301450.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CO-23]
gi|419785631|ref|ZP_14311382.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-M]
gi|421149542|ref|ZP_15609200.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newbould 305]
gi|422744913|ref|ZP_16798868.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA177]
gi|422746628|ref|ZP_16800559.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA131]
gi|424770820|ref|ZP_18198002.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CM05]
gi|424784626|ref|ZP_18211436.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus CN79]
gi|440708128|ref|ZP_20888804.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21282]
gi|440734249|ref|ZP_20913861.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus DSM 20231]
gi|443637771|ref|ZP_21121839.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21236]
gi|443640354|ref|ZP_21124345.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21196]
gi|448741163|ref|ZP_21723134.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/314250]
gi|448745335|ref|ZP_21727190.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/Y21]
gi|54036854|sp|P63786.1|CLPP_STAAW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|54036862|sp|P99089.1|CLPP_STAAN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|54040892|sp|P63785.1|CLPP_STAAM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56748671|sp|Q6GB62.1|CLPP_STAAS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56748685|sp|Q6GIM3.1|CLPP_STAAR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460165|sp|Q5HHQ0.1|CLPP_STAAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183185|sp|Q2YSF8.1|CLPP_STAAB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243169|sp|Q2G036.1|CLPP_STAA8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|124013828|sp|Q2FIM5.1|CLPP_STAA3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214713|sp|A7WZR9.1|CLPP_STAA1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|172048797|sp|A6QF76.1|CLPP_STAAE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082468|sp|A6TZP7.1|CLPP_STAA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082469|sp|A5IQX2.1|CLPP_STAA9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082470|sp|A8Z045.1|CLPP_STAAT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|13700659|dbj|BAB41956.1| clpP [Staphylococcus aureus subsp. aureus N315]
gi|14246537|dbj|BAB56930.1| ATP-dependent Clp protease proteolytic subunit homologue
[Staphylococcus aureus subsp. aureus Mu50]
gi|21203896|dbj|BAB94595.1| clpP [Staphylococcus aureus subsp. aureus MW2]
gi|49241154|emb|CAG39832.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MRSA252]
gi|49244083|emb|CAG42509.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MSSA476]
gi|57284295|gb|AAW36389.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus COL]
gi|82656005|emb|CAI80410.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus RF122]
gi|87127458|gb|ABD21972.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87202109|gb|ABD29919.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147740297|gb|ABQ48595.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus subsp. aureus JH9]
gi|149945729|gb|ABR51665.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus JH1]
gi|150373748|dbj|BAF67008.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156721231|dbj|BAF77648.1| ATP-dependent Clp protease proteolytic subunit homologue
[Staphylococcus aureus subsp. aureus Mu3]
gi|160367847|gb|ABX28818.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724847|gb|EES93576.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253729257|gb|EES97986.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|257272458|gb|EEV04581.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275749|gb|EEV07222.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279384|gb|EEV09985.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397]
gi|257282303|gb|EEV12438.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus E1410]
gi|257284983|gb|EEV15102.1| clp protease [Staphylococcus aureus subsp. aureus M876]
gi|257788882|gb|EEV27222.1| clp protease [Staphylococcus aureus A9781]
gi|257839019|gb|EEV63498.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A9763]
gi|257842450|gb|EEV66874.1| clp protease [Staphylococcus aureus A9719]
gi|257846478|gb|EEV70501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9635]
gi|257847705|gb|EEV71702.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9299]
gi|257852453|gb|EEV76374.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A8115]
gi|257855345|gb|EEV78283.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6300]
gi|257857089|gb|EEV79988.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6224]
gi|257860399|gb|EEV83231.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5948]
gi|257863846|gb|EEV86602.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5937]
gi|259159395|gb|EEW44448.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3]
gi|259162388|gb|EEW46960.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30]
gi|262074680|gb|ACY10653.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ED98]
gi|269940345|emb|CBI48722.1| putative ATP-dependent Clp protease proteolyticsubunit
[Staphylococcus aureus subsp. aureus TW20]
gi|282314395|gb|EFB44785.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282317695|gb|EFB48067.1| Clp protease [Staphylococcus aureus subsp. aureus C427]
gi|282320058|gb|EFB50405.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
gi|282322642|gb|EFB52964.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M899]
gi|282325807|gb|EFB56115.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282327822|gb|EFB58104.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282331585|gb|EFB61097.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260]
gi|282591528|gb|EFB96600.1| Clp protease [Staphylococcus aureus A10102]
gi|282593724|gb|EFB98716.1| Clp protease [Staphylococcus aureus A9765]
gi|282596353|gb|EFC01314.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus C160]
gi|282762560|gb|EFC02699.1| Clp protease [Staphylococcus aureus A8117]
gi|283460078|gb|EFC07168.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp.
aureus H19]
gi|283470062|emb|CAQ49273.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ST398]
gi|283791051|gb|EFC29866.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus A017934/97]
gi|285816470|gb|ADC36957.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 04-02981]
gi|290921150|gb|EFD98211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M1015]
gi|291095658|gb|EFE25919.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|291467698|gb|EFF10213.1| Clp protease [Staphylococcus aureus subsp. aureus M809]
gi|294822634|gb|EFG39074.1| Clp protease [Staphylococcus aureus A9754]
gi|294968637|gb|EFG44660.1| Clp protease [Staphylococcus aureus A8819]
gi|295128735|gb|EFG58366.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296886759|gb|EFH25663.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297177889|gb|EFH37138.1| Clp protease [Staphylococcus aureus A8796]
gi|297576597|gb|EFH95312.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MN8]
gi|298694101|gb|ADI97323.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ED133]
gi|300886842|gb|EFK82044.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH70]
gi|302332479|gb|ADL22672.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus JKD6159]
gi|302750665|gb|ADL64842.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304339972|gb|EFM05916.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312438803|gb|ADQ77874.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH60]
gi|312829260|emb|CBX34102.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129024|gb|EFT85021.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS03]
gi|315194387|gb|EFU24779.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS00]
gi|315196246|gb|EFU26600.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS01]
gi|320139896|gb|EFW31757.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320142013|gb|EFW33841.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA177]
gi|323438624|gb|EGA96368.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O11]
gi|323441949|gb|EGA99586.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O46]
gi|329313489|gb|AEB87902.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus T0131]
gi|329723806|gb|EGG60334.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21189]
gi|329724642|gb|EGG61149.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21172]
gi|329729644|gb|EGG66045.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21193]
gi|334268522|gb|EGL86960.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21305]
gi|334274514|gb|EGL92832.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21318]
gi|334275498|gb|EGL93787.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21310]
gi|341840549|gb|EGS82052.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21235]
gi|341843411|gb|EGS84638.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21266]
gi|341846489|gb|EGS87681.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21269]
gi|341849148|gb|EGS90299.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21259]
gi|341854663|gb|EGS95529.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21200]
gi|341857827|gb|EGS98637.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21201]
gi|341858295|gb|EGS99092.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21195]
gi|344177005|emb|CCC87469.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus LGA251]
gi|356872229|emb|CCE58568.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MSHR1132]
gi|359829849|gb|AEV77827.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus M013]
gi|364522083|gb|AEW64833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 11819-97]
gi|365167418|gb|EHM58883.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21178]
gi|365168239|gb|EHM59592.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21202]
gi|365173650|gb|EHM64138.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21209]
gi|365223769|gb|EHM65044.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus VCU006]
gi|365235450|gb|EHM76369.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21334]
gi|365236874|gb|EHM77752.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21194]
gi|365238910|gb|EHM79738.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21331]
gi|365243223|gb|EHM83909.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21232]
gi|365243830|gb|EHM84498.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21340]
gi|371970171|gb|EHO87601.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21252]
gi|371972686|gb|EHO90060.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21264]
gi|371977662|gb|EHO94925.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21262]
gi|371980174|gb|EHO97388.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21333]
gi|371983433|gb|EHP00577.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21272]
gi|371983904|gb|EHP01037.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21283]
gi|374362755|gb|AEZ36860.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VC40]
gi|374397523|gb|EHQ68732.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21345]
gi|374398927|gb|EHQ70079.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21343]
gi|374400646|gb|EHQ71756.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21342]
gi|375016574|gb|EHS10213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-99]
gi|375017513|gb|EHS11127.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-3]
gi|375020140|gb|EHS13681.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-24]
gi|375025890|gb|EHS19283.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-55]
gi|375026798|gb|EHS20176.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-91]
gi|375030962|gb|EHS24257.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-88]
gi|375034031|gb|EHS27209.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-105]
gi|375039561|gb|EHS32485.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-111]
gi|375039717|gb|EHS32635.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-122]
gi|375367180|gb|EHS71148.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-125]
gi|375370404|gb|EHS74213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-157]
gi|375376349|gb|EHS79884.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-189]
gi|375378040|gb|EHS81464.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-160]
gi|377696321|gb|EHT20677.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1165]
gi|377696694|gb|EHT21049.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1114]
gi|377698573|gb|EHT22921.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1057]
gi|377705237|gb|EHT29545.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1214]
gi|377707151|gb|EHT31445.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1500]
gi|377707491|gb|EHT31784.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1242]
gi|377711709|gb|EHT35938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1605]
gi|377716064|gb|EHT40249.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1769]
gi|377716669|gb|EHT40851.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1750]
gi|377719459|gb|EHT43629.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1835]
gi|377722780|gb|EHT46905.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1096]
gi|377727358|gb|EHT51465.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1150]
gi|377732367|gb|EHT56418.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1176]
gi|377732911|gb|EHT56961.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1213]
gi|377735760|gb|EHT59790.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1233]
gi|377738003|gb|EHT62012.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1612]
gi|377742058|gb|EHT66043.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1770]
gi|377746301|gb|EHT70272.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG2018]
gi|377746640|gb|EHT70610.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG290]
gi|377751138|gb|EHT75072.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1267]
gi|377754176|gb|EHT78085.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1524]
gi|377755900|gb|EHT79798.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG149]
gi|377757459|gb|EHT81347.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|377761964|gb|EHT85833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|377766399|gb|EHT90232.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|377767166|gb|EHT90979.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC348]
gi|377771483|gb|EHT95237.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC128]
gi|377772129|gb|EHT95882.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC93]
gi|379992914|gb|EIA14363.1| ClpP [Staphylococcus aureus subsp. aureus DR10]
gi|383362393|gb|EID39746.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-M]
gi|383970734|gb|EID86827.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CO-23]
gi|384229829|gb|AFH69076.1| ClpP [Staphylococcus aureus subsp. aureus 71193]
gi|385195802|emb|CCG15411.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387720067|gb|EIK07989.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS3a]
gi|387720500|gb|EIK08410.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS2]
gi|387722162|gb|EIK09994.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS1]
gi|387726898|gb|EIK14438.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS4]
gi|387728978|gb|EIK16450.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS5]
gi|387731240|gb|EIK18554.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS6]
gi|387737314|gb|EIK24384.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS8]
gi|387738791|gb|EIK25811.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS9]
gi|387739281|gb|EIK26289.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS7]
gi|387746356|gb|EIK33088.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS10]
gi|387746991|gb|EIK33707.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11a]
gi|387748374|gb|EIK35058.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11b]
gi|394330459|gb|EJE56551.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newbould 305]
gi|402347961|gb|EJU82967.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CM05]
gi|404439658|gb|AFR72851.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus 08BA02176]
gi|408423155|emb|CCJ10566.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408425145|emb|CCJ12532.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408427133|emb|CCJ14496.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408429120|emb|CCJ26285.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408431108|emb|CCJ18423.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408433102|emb|CCJ20387.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408435093|emb|CCJ22353.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408437078|emb|CCJ24321.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|421957225|gb|EKU09549.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus CN79]
gi|436431277|gb|ELP28630.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus DSM 20231]
gi|436505312|gb|ELP41236.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21282]
gi|443405001|gb|ELS63615.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21236]
gi|443405495|gb|ELS64098.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21196]
gi|445548141|gb|ELY16396.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/314250]
gi|445561343|gb|ELY17551.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/Y21]
Length = 195
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|15615680|ref|NP_243984.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
gi|18203165|sp|Q9K888.1|CLPP2_BACHD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|10175740|dbj|BAB06837.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
Length = 194
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + + I+A+ L+L+ E+ +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIVFLGAAIDDQIANSIVAQLLFLEAENPKKDIYLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ FAIYD M +VKP I T+C G A AA+LL AG KG R ALP+S IMI Q
Sbjct: 72 TSAGFAIYDTMQFVKPSIHTICTGMAASFAAILLLAGTKGKRFALPNSEIMIHQ 125
>gi|195578155|ref|XP_002078931.1| GD23683 [Drosophila simulans]
gi|194190940|gb|EDX04516.1| GD23683 [Drosophila simulans]
Length = 253
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI Q
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQ 150
>gi|195339773|ref|XP_002036491.1| GM18225 [Drosophila sechellia]
gi|116811667|emb|CAL26000.1| CG5045 [Drosophila simulans]
gi|194130371|gb|EDW52414.1| GM18225 [Drosophila sechellia]
Length = 253
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI Q
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQ 150
>gi|116811645|emb|CAL25989.1| CG5045 [Drosophila melanogaster]
gi|116811649|emb|CAL25991.1| CG5045 [Drosophila melanogaster]
gi|116811651|emb|CAL25992.1| CG5045 [Drosophila melanogaster]
gi|116811653|emb|CAL25993.1| CG5045 [Drosophila melanogaster]
gi|116811655|emb|CAL25994.1| CG5045 [Drosophila melanogaster]
gi|116811657|emb|CAL25995.1| CG5045 [Drosophila melanogaster]
gi|116811659|emb|CAL25996.1| CG5045 [Drosophila melanogaster]
gi|116811661|emb|CAL25997.1| CG5045 [Drosophila melanogaster]
gi|116811663|emb|CAL25998.1| CG5045 [Drosophila melanogaster]
gi|116811665|emb|CAL25999.1| CG5045 [Drosophila melanogaster]
gi|223966785|emb|CAR93129.1| CG5045-PA [Drosophila melanogaster]
gi|223966787|emb|CAR93130.1| CG5045-PA [Drosophila melanogaster]
gi|223966789|emb|CAR93131.1| CG5045-PA [Drosophila melanogaster]
gi|223966791|emb|CAR93132.1| CG5045-PA [Drosophila melanogaster]
gi|223966795|emb|CAR93134.1| CG5045-PA [Drosophila melanogaster]
gi|223966797|emb|CAR93135.1| CG5045-PA [Drosophila melanogaster]
gi|223966799|emb|CAR93136.1| CG5045-PA [Drosophila melanogaster]
gi|223966801|emb|CAR93137.1| CG5045-PA [Drosophila melanogaster]
gi|223966803|emb|CAR93138.1| CG5045-PA [Drosophila melanogaster]
Length = 253
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI Q
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQ 150
>gi|308271899|emb|CBX28507.1| ATP-dependent Clp protease proteolytic subunit [uncultured
Desulfobacterium sp.]
Length = 206
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 78/134 (58%), Gaps = 11/134 (8%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P+I MVI +S + D+ S L K+RI++LG + V L++A+ L+L+ ED +K
Sbjct: 2 PLIPMVIEQSS---RGERAYDIYSRLLKDRIIFLGTAMNDEVANLLIAQLLFLESEDPDK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I YINS G G T A+YD M Y+K I T+C+G A ALLL AGAKG
Sbjct: 59 DINFYINSPG--------GVVTSGLAVYDTMQYIKSDIATVCIGQAASMGALLLTAGAKG 110
Query: 195 NRAALPSSTIMIKQ 208
R ALP++ I+I Q
Sbjct: 111 KRYALPNARILIHQ 124
>gi|187776850|ref|ZP_02993323.1| hypothetical protein CLOSPO_00389 [Clostridium sporogenes ATCC
15579]
gi|424826849|ref|ZP_18251700.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
sporogenes PA 3679]
gi|187775509|gb|EDU39311.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium sporogenes ATCC 15579]
gi|365980550|gb|EHN16576.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
sporogenes PA 3679]
Length = 194
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L + LI+A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG A A LL AGAKG R ALP+S +MI Q
Sbjct: 71 ITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQ 124
>gi|320530213|ref|ZP_08031283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
artemidis F0399]
gi|320137646|gb|EFW29558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
artemidis F0399]
Length = 199
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG +V +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 14 DIYSRLLKERIIFLGGPIDDNVANVVVAQMLFLESEDPDKDIHLYINSPG--------GV 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A ++LL AGAKG R ALP + IMI Q
Sbjct: 66 VTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQ 119
>gi|222055723|ref|YP_002538085.1| ATP-dependent Clp protease proteolytic subunit [Geobacter daltonii
FRC-32]
gi|254763790|sp|B9M0Y1.1|CLPP_GEOSF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|221565012|gb|ACM20984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
daltonii FRC-32]
Length = 199
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 76/131 (58%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T + D+ S L K+RI++LG + +V+ L++A+ L+L+ ED +K I+
Sbjct: 1 MLVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGAIDDTVSNLVIAQLLFLEAEDPDKDIH 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+K P+ T+CVG A A LL G KG R
Sbjct: 61 LYINSPG--------GVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRF 112
Query: 198 ALPSSTIMIKQ 208
+L +S IMI Q
Sbjct: 113 SLANSRIMIHQ 123
>gi|116811647|emb|CAL25990.1| CG5045 [Drosophila melanogaster]
Length = 253
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI Q
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQ 150
>gi|418911445|ref|ZP_13465428.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG547]
gi|377724823|gb|EHT48938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG547]
Length = 195
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|333372559|ref|ZP_08464484.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
gi|332972924|gb|EGK10866.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
Length = 206
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 72 PRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYE 130
PR + +IP+ T+ + D+ S L K+RI++LG +V I+A+ L+LQ E
Sbjct: 7 PRGGTVMNLIPYVVEQTSRGERSYDIYSRLLKDRIIFLGSEINDAVANTIVAQMLFLQTE 66
Query: 131 DVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGA 190
D K I LYINS G G + FAIYD M +VK I T+C+G A A LL +
Sbjct: 67 DPNKDIQLYINSPG--------GSISAGFAIYDTMQHVKCDIQTICIGMAASMGAFLLSS 118
Query: 191 GAKGNRAALPSSTIMIKQ 208
G KG R ALP+S +MI Q
Sbjct: 119 GTKGKRLALPNSEVMIHQ 136
>gi|223043057|ref|ZP_03613105.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus capitis SK14]
gi|417905699|ref|ZP_12549498.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus capitis VCU116]
gi|222443911|gb|EEE50008.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus capitis SK14]
gi|341598593|gb|EGS41093.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus capitis VCU116]
Length = 195
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|149194680|ref|ZP_01871775.1| ATP-dependent Clp protease proteolytic subunit [Caminibacter
mediatlanticus TB-2]
gi|149135103|gb|EDM23584.1| ATP-dependent Clp protease proteolytic subunit [Caminibacter
mediatlanticus TB-2]
Length = 196
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 75/133 (56%), Gaps = 9/133 (6%)
Query: 77 ITMVIP-FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++++IP T + D+ S L K+RI+ L LI+A+ L+L+ E+ EK
Sbjct: 1 MSILIPTVIEKTGRGERAYDIYSRLLKDRIIMLQGEINDHTASLIVAQLLFLEAENPEKD 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINS G G T FAIYD M Y+KP + T+C+G A A LL +GAKG
Sbjct: 61 IYLYINSPG--------GVVTSGFAIYDTMNYIKPDVVTICMGQAASMGAFLLSSGAKGK 112
Query: 196 RAALPSSTIMIKQ 208
R ALP + IMI Q
Sbjct: 113 RFALPHARIMIHQ 125
>gi|242373003|ref|ZP_04818577.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W1]
gi|242349329|gb|EES40930.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W1]
Length = 195
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|374604920|ref|ZP_09677867.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
dendritiformis C454]
gi|374389443|gb|EHQ60818.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
dendritiformis C454]
Length = 192
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V I+A+ L+LQ +D +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSQVNDVVANSIIAQMLFLQADDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+CVG A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQ 124
>gi|20129427|ref|NP_609388.1| CG5045, isoform A [Drosophila melanogaster]
gi|442627236|ref|NP_001260332.1| CG5045, isoform B [Drosophila melanogaster]
gi|7297671|gb|AAF52923.1| CG5045, isoform A [Drosophila melanogaster]
gi|21428864|gb|AAM50151.1| GH10833p [Drosophila melanogaster]
gi|220944040|gb|ACL84563.1| CG5045-PA [synthetic construct]
gi|220954028|gb|ACL89557.1| CG5045-PA [synthetic construct]
gi|223966793|emb|CAR93133.1| CG5045-PA [Drosophila melanogaster]
gi|440213650|gb|AGB92867.1| CG5045, isoform B [Drosophila melanogaster]
Length = 253
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI Q
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQ 150
>gi|358051444|ref|ZP_09145643.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simiae CCM 7213]
gi|357259050|gb|EHJ08908.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simiae CCM 7213]
Length = 194
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|338811972|ref|ZP_08624171.1| ATP-dependent Clp protease proteolytic subunit [Acetonema longum
DSM 6540]
gi|337275941|gb|EGO64379.1| ATP-dependent Clp protease proteolytic subunit [Acetonema longum
DSM 6540]
Length = 202
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++G ++ L++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIVFIGGPIDDTMANLVIAQLLFLESEDPEKDIHLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A AA+LL AGAKG R ALP + +MI Q
Sbjct: 71 VTAGLAIYDTMQYIKPDVSTICLGLAASMAAILLTAGAKGKRYALPYARVMIHQ 124
>gi|374977816|pdb|3V5I|A Chain A, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977817|pdb|3V5I|B Chain B, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977818|pdb|3V5I|C Chain C, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977819|pdb|3V5I|D Chain D, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977820|pdb|3V5I|E Chain E, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977821|pdb|3V5I|F Chain F, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977822|pdb|3V5I|G Chain G, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977823|pdb|3V5I|H Chain H, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977824|pdb|3V5I|I Chain I, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977825|pdb|3V5I|J Chain J, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977826|pdb|3V5I|K Chain K, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977827|pdb|3V5I|L Chain L, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977828|pdb|3V5I|M Chain M, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977829|pdb|3V5I|N Chain N, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977830|pdb|3V5I|O Chain O, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977831|pdb|3V5I|P Chain P, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977832|pdb|3V5I|Q Chain Q, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977833|pdb|3V5I|R Chain R, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977834|pdb|3V5I|S Chain S, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977835|pdb|3V5I|T Chain T, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977836|pdb|3V5I|U Chain U, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977837|pdb|3V5I|V Chain V, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977838|pdb|3V5I|W Chain W, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977839|pdb|3V5I|X Chain X, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977840|pdb|3V5I|Y Chain Y, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977841|pdb|3V5I|Z Chain Z, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977842|pdb|3V5I|AA Chain a, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977843|pdb|3V5I|BB Chain b, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
Length = 203
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|384915524|ref|ZP_10015740.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
(Caseinolytic protease) (Protease Ti) (Heat shock
protein F21.5) [Methylacidiphilum fumariolicum SolV]
gi|384527074|emb|CCG91611.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
(Caseinolytic protease) (Protease Ti) (Heat shock
protein F21.5) [Methylacidiphilum fumariolicum SolV]
Length = 216
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 79/136 (58%), Gaps = 9/136 (6%)
Query: 74 SPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
+P+I+ VIP T + D+ S L K+RIV++G ++ L++A+ L+LQ ED
Sbjct: 3 NPIISQVIPMVVEQTGRGERGYDIFSRLLKDRIVFIGTPIDDNIANLVIAQLLFLQMEDP 62
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
+K I LYI+S G GY T AIYD M ++ + T C+G A AA+LL AG
Sbjct: 63 KKDISLYIHSPG--------GYVTAGMAIYDTMQFLSCDVNTYCIGQAASMAAVLLAAGT 114
Query: 193 KGNRAALPSSTIMIKQ 208
KG R ALP++ IMI Q
Sbjct: 115 KGKRFALPNARIMIHQ 130
>gi|384248981|gb|EIE22464.1| ATP-dependent Clp protease proteolytic subunit [Coccomyxa
subellipsoidea C-169]
Length = 202
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + ++ LI+A+ LYL+ E+ E+PI +YINS G G
Sbjct: 22 DIYSRLLRERIVMVNGGIDDHMSNLIIAQLLYLESENPEQPISMYINSQG--------GV 73
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y++ PI TLCVG A A+LLL AG KG+R +LP+S IM+ Q
Sbjct: 74 VTSGLAIYDTMQYIRNPISTLCVGQAASMASLLLAAGEKGHRRSLPNSRIMLHQ 127
>gi|260892392|ref|YP_003238489.1| ATP-dependent Clp protease proteolytic subunit [Ammonifex degensii
KC4]
gi|260864533|gb|ACX51639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ammonifex
degensii KC4]
Length = 200
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + L++A+ L+L+ ED EK I+LYINS G G
Sbjct: 21 DIYSRLLKDRIIFIGGPIDDHLANLVIAQLLFLEAEDPEKDIHLYINSPG--------GL 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y++P + T+C+G A AA LL AGAKG R ALP + IM+ Q
Sbjct: 73 VTAGMAIYDTMQYIRPDVSTICLGQAASMAAFLLAAGAKGKRYALPYARIMLHQ 126
>gi|314933077|ref|ZP_07840443.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus caprae C87]
gi|313654396|gb|EFS18152.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus caprae C87]
Length = 195
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|223042116|ref|ZP_03612288.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240950344|ref|ZP_04754614.1| ATP-dependent Clp protease proteolytic subunit ClpP [Actinobacillus
minor NM305]
gi|223017093|gb|EEF15533.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240295155|gb|EER45974.1| ATP-dependent Clp protease proteolytic subunit ClpP [Actinobacillus
minor NM305]
Length = 197
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 75/133 (56%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+I MV+ TS + D+ S L K RI++L ++ LI+A+ L+L+ ED EK
Sbjct: 3 LIPMVVEQTSKG---ERSYDIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKD 59
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINS G G T AIYD M ++KP + TLC G A A LL GAKG
Sbjct: 60 IYLYINSPG--------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGK 111
Query: 196 RAALPSSTIMIKQ 208
R ALP++ +MI Q
Sbjct: 112 RFALPNARVMIHQ 124
>gi|347542087|ref|YP_004856723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-rat-Yit]
gi|346985122|dbj|BAK80797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-rat-Yit]
Length = 195
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIYSRLLKERIIFLGDEVNDVTASLIVAQLLFLESEDTDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL +GAKG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFALPNSEIMIHQ 124
>gi|417644372|ref|ZP_12294370.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus warneri VCU121]
gi|445060249|ref|YP_007385653.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
warneri SG1]
gi|330684877|gb|EGG96562.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU121]
gi|443426306|gb|AGC91209.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
warneri SG1]
Length = 196
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRYALPNAEVMIHQ 124
>gi|239636619|ref|ZP_04677621.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus warneri L37603]
gi|239597974|gb|EEQ80469.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus warneri L37603]
Length = 196
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRYALPNAEVMIHQ 124
>gi|188996270|ref|YP_001930521.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931337|gb|ACD65967.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 201
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 77/140 (55%), Gaps = 17/140 (12%)
Query: 74 SPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
++ +IP EQ P D+ S L K+RI+ LG + L++A+ L+L+
Sbjct: 2 DKILNQLIPIV----IEQTPRGERAYDIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLE 57
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
ED +K IY+YINS G G T AIYD M Y+KP + T+C+G A A LL
Sbjct: 58 SEDPDKDIYMYINSPG--------GVVTAGLAIYDTMNYIKPDVVTICMGQAASMGAFLL 109
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
AGAKG R +LP++ IMI Q
Sbjct: 110 SAGAKGKRYSLPNARIMIHQ 129
>gi|333361419|pdb|3QWD|A Chain A, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361420|pdb|3QWD|B Chain B, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361421|pdb|3QWD|C Chain C, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361422|pdb|3QWD|D Chain D, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361423|pdb|3QWD|E Chain E, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361424|pdb|3QWD|F Chain F, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361425|pdb|3QWD|G Chain G, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361426|pdb|3QWD|H Chain H, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361427|pdb|3QWD|I Chain I, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361428|pdb|3QWD|J Chain J, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361429|pdb|3QWD|K Chain K, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361430|pdb|3QWD|L Chain L, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361431|pdb|3QWD|M Chain M, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361432|pdb|3QWD|N Chain N, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|374977802|pdb|3V5E|A Chain A, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977803|pdb|3V5E|B Chain B, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977804|pdb|3V5E|C Chain C, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977805|pdb|3V5E|D Chain D, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977806|pdb|3V5E|E Chain E, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977807|pdb|3V5E|F Chain F, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977808|pdb|3V5E|G Chain G, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977809|pdb|3V5E|H Chain H, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977810|pdb|3V5E|I Chain I, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977811|pdb|3V5E|J Chain J, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977812|pdb|3V5E|K Chain K, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977813|pdb|3V5E|L Chain L, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977814|pdb|3V5E|M Chain M, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977815|pdb|3V5E|N Chain N, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
Length = 203
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|357009842|ref|ZP_09074841.1| ATP-dependent Clp protease proteolytic subunit 1 [Paenibacillus
elgii B69]
Length = 192
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG V I A+ L L ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIVFLGSEIDDQVANSITAQLLLLSAEDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD M ++KP + T+CVG A AA+LL AGAKG R ALP++ +MI Q
Sbjct: 71 TTAGFAIYDTMQFIKPDVSTICVGFAASFAAVLLVAGAKGKRFALPNAEVMIHQ 124
>gi|386388774|ref|ZP_10073627.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus paraphrohaemolyticus HK411]
gi|385697288|gb|EIG27723.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus paraphrohaemolyticus HK411]
Length = 197
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 70/124 (56%), Gaps = 13/124 (10%)
Query: 90 EQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTG 144
EQ P D+ S L K RI++L ++ LI+A+ L+L+ ED EK IYLYINS G
Sbjct: 9 EQTPKGERSYDIFSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPG 68
Query: 145 TTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
G T AIYD M ++KP + TLC G A A LL GAKG R ALP++ +
Sbjct: 69 --------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARV 120
Query: 205 MIKQ 208
MI Q
Sbjct: 121 MIHQ 124
>gi|332981496|ref|YP_004462937.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella
australiensis 50-1 BON]
gi|332699174|gb|AEE96115.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella
australiensis 50-1 BON]
Length = 194
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV+L + L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIYSRLLKERIVFLDGEVDDATASLVVAQMLFLESEDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD M Y+KP + T+C+G A A LL AGAKG R ALP+S I+I Q
Sbjct: 71 VTAGFAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRYALPNSEILIHQ 124
>gi|237755491|ref|ZP_04584113.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237692355|gb|EEP61341.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 201
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 77/140 (55%), Gaps = 17/140 (12%)
Query: 74 SPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
++ +IP EQ P D+ S L K+RI+ LG + L++A+ L+L+
Sbjct: 2 DKILNQLIPIV----IEQTPRGERAYDIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLE 57
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
ED +K IY+YINS G G T AIYD M Y+KP + T+C+G A A LL
Sbjct: 58 SEDPDKDIYMYINSPG--------GVVTAGLAIYDTMNYIKPDVVTICMGQAASMGAFLL 109
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
AGAKG R +LP++ IMI Q
Sbjct: 110 SAGAKGKRYSLPNARIMIHQ 129
>gi|195118808|ref|XP_002003928.1| GI20379 [Drosophila mojavensis]
gi|193914503|gb|EDW13370.1| GI20379 [Drosophila mojavensis]
Length = 223
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 14 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI Q
Sbjct: 66 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQ 119
>gi|387773849|ref|ZP_10129134.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
parahaemolyticus HK385]
gi|386903670|gb|EIJ68477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
parahaemolyticus HK385]
Length = 197
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 70/124 (56%), Gaps = 13/124 (10%)
Query: 90 EQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTG 144
EQ P D+ S L K RI++L ++ LI+A+ L+L+ ED EK IYLYINS G
Sbjct: 9 EQTPKGERSYDIFSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPG 68
Query: 145 TTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
G T AIYD M ++KP + TLC G A A LL GAKG R ALP++ +
Sbjct: 69 --------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARV 120
Query: 205 MIKQ 208
MI Q
Sbjct: 121 MIHQ 124
>gi|425737678|ref|ZP_18855949.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
massiliensis S46]
gi|425481335|gb|EKU48495.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
massiliensis S46]
Length = 195
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQVDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRYALPNAEVMIHQ 124
>gi|421862173|ref|ZP_16293988.1| Clp protease [Paenibacillus popilliae ATCC 14706]
gi|410828304|dbj|GAC44425.1| Clp protease [Paenibacillus popilliae ATCC 14706]
Length = 198
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + V ++A+ L+LQ +D EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDDVANSVIAQMLFLQADDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP I T+CVG A +LLL AGA G R ALP+S IMI Q
Sbjct: 71 VTAGMAIYDTMQHIKPDISTICVGLAASMGSLLLTAGAPGKRIALPNSEIMIHQ 124
>gi|195952528|ref|YP_002120818.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. Y04AAS1]
gi|195932140|gb|ACG56840.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. Y04AAS1]
Length = 205
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 80/151 (52%), Gaps = 23/151 (15%)
Query: 63 NPDSFCKSKPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVT 117
NP + K +I ++P EQ P D+ S L ++RIV LG V
Sbjct: 3 NPKDYQK------IIDQLVPIV----VEQTPRGERAYDIYSRLLQDRIVILGFPIDDHVA 52
Query: 118 ELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 177
LI+A+ L+L+ +D EK I +YINS G G T AIYD M Y+KP + T+C+
Sbjct: 53 NLIVAQLLFLEAQDPEKDIQMYINSPG--------GSVTAGLAIYDTMQYIKPDVTTICI 104
Query: 178 GNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
G A A+LL AG KG R ALP++ IMI Q
Sbjct: 105 GQAASMGAVLLAAGTKGKRFALPNARIMIHQ 135
>gi|148263972|ref|YP_001230678.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
uraniireducens Rf4]
gi|189082459|sp|A5GFA0.1|CLPP_GEOUR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146397472|gb|ABQ26105.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacter
uraniireducens Rf4]
Length = 199
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 76/131 (58%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T + D+ S L K+RIV+LG + +++ L++A+ L+L+ ED +K I+
Sbjct: 1 MLVPIVVEQTGRGERSYDIYSRLLKDRIVFLGGAIDDAISNLVIAQLLFLEAEDPDKDIH 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+K P+ T+CVG A A LL G KG R
Sbjct: 61 LYINSPG--------GVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRF 112
Query: 198 ALPSSTIMIKQ 208
+L +S IMI Q
Sbjct: 113 SLTNSRIMIHQ 123
>gi|303248988|ref|ZP_07335234.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
fructosovorans JJ]
gi|302489637|gb|EFL49575.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
fructosovorans JJ]
Length = 204
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + V LI A+ L+L+ ED EK I LYINS G G
Sbjct: 19 DIYSRLLKDRIILLGSAVDDYVANLICAQLLFLESEDPEKEISLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M YV PP+ TLC+G A ALLL AGA G R ALP S IMI Q
Sbjct: 71 VSAGLAIYDTMQYVMPPVSTLCMGQAASMGALLLCAGATGTRYALPHSRIMIHQ 124
>gi|334136415|ref|ZP_08509881.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
gi|333606025|gb|EGL17373.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
Length = 197
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + V L++A+ L+LQ +D EK I++YINS G G
Sbjct: 19 DIYSRLLKDRIIFIGSAIDDDVANLVIAQLLFLQSQDAEKDIHVYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T IYD M ++KP + T+CVG A +LLL AGA G R ALP+S +MI Q
Sbjct: 71 VTAGLGIYDTMQHIKPDVSTICVGMAASMGSLLLTAGAPGKRFALPNSEVMIHQ 124
>gi|218885218|ref|YP_002434539.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|226706450|sp|B8DNL4.1|CLPP_DESVM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|218756172|gb|ACL07071.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 201
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V LI A+ L+L+ E+ EK IYLYINS G G
Sbjct: 18 DIYSRLLKDRIILLGTPIDDQVASLICAQLLFLESENPEKEIYLYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+ P+ TLC+G A ALLL AGA G R ALP+S IMI Q
Sbjct: 70 VTAGMAIYDTMQYITSPVATLCLGQAASMGALLLAAGAPGMRHALPNSRIMIHQ 123
>gi|402815454|ref|ZP_10865046.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
gi|402506494|gb|EJW17017.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
Length = 198
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + V ++A+ L+LQ +D EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDDVANSVIAQLLFLQADDPEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+CVG A +LLL AGA G R ALP+S IMI Q
Sbjct: 71 VTAGMAIYDTMQHIKPDVSTICVGLAASMGSLLLTAGAPGKRIALPNSEIMIHQ 124
>gi|429737530|ref|ZP_19271388.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 138 str. F0429]
gi|429152336|gb|EKX95166.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 138 str. F0429]
Length = 197
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 78/144 (54%), Gaps = 14/144 (9%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 14 DIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPG--------GV 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIK------Q 208
T AIYD M Y+KP + T+C+G A ++LL AGA G R ALP + IMI Q
Sbjct: 66 VTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQPLGGAQ 125
Query: 209 AGDTGICLLKSSLTWLNSVKLNVL 232
T I + + L V N+L
Sbjct: 126 GQSTDIQIQAKEILRLREVGNNIL 149
>gi|302874445|ref|YP_003843078.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
cellulovorans 743B]
gi|307690948|ref|ZP_07633394.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
cellulovorans 743B]
gi|302577302|gb|ADL51314.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
cellulovorans 743B]
Length = 194
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + +++A+ L+L+ ED +K I LYINS G G
Sbjct: 19 DIYSRLLKDRIVFLGEEVNDASASVVVAQLLFLESEDPDKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTMNYIKPDVATICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQ 124
>gi|229133677|ref|ZP_04262503.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST196]
gi|229167385|ref|ZP_04295123.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH621]
gi|228615947|gb|EEK73034.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH621]
gi|228649712|gb|EEL05721.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST196]
Length = 198
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 75/133 (56%), Gaps = 9/133 (6%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
I VIP+ T + D+ S L K+RI+ +G V ++A+ L+L+ ED EK
Sbjct: 5 IMSVIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKD 64
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I+LYINS G G T FAI D M +KP + TLC+G A ALLL AGAKG
Sbjct: 65 IFLYINSPG--------GSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGK 116
Query: 196 RAALPSSTIMIKQ 208
R ALP+S IMI Q
Sbjct: 117 RFALPNSEIMIHQ 129
>gi|410659338|ref|YP_006911709.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
DCA]
gi|410662325|ref|YP_006914696.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
CF]
gi|409021693|gb|AFV03724.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
DCA]
gi|409024681|gb|AFV06711.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
CF]
Length = 209
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + +V +++A+ L+L+ ED EK +++YINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGAIDDNVANVVVAQLLFLEAEDPEKDVFIYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y++P + T+C+G A A LL AG KG RAALP++ I+I Q
Sbjct: 72 ITAGMAIYDTMQYIRPDVQTICIGMAASMGAFLLAAGTKGKRAALPNAEILIHQ 125
>gi|374605361|ref|ZP_09678292.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
dendritiformis C454]
gi|374389036|gb|EHQ60427.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
dendritiformis C454]
Length = 198
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + V I+A+ L+LQ +D EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDDVANSIIAQMLFLQADDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+CVG A +LLL AGA G R ALP+S IMI Q
Sbjct: 71 VTAGMAIYDTMQHIKPDVSTICVGLAASMGSLLLTAGAPGKRIALPNSEIMIHQ 124
>gi|357419906|ref|YP_004932898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovirga
lienii DSM 17291]
gi|355397372|gb|AER66801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovirga
lienii DSM 17291]
Length = 192
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 76/131 (58%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M+IP T + D+ S L K+RIV++G + + L++A+ L+L+ ED EK +Y
Sbjct: 1 MLIPMVIEQTGRGERAYDIYSRLLKDRIVFIGEAIDDHLANLVVAQLLFLESEDPEKDVY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
+YINS G G T AIYD M Y+K P+ T+C+G A AA+LL G G R
Sbjct: 61 VYINSPG--------GVITSGLAIYDTMQYIKCPVSTICIGQAASMAAVLLAGGEPGKRI 112
Query: 198 ALPSSTIMIKQ 208
ALPS+ IM+ Q
Sbjct: 113 ALPSARIMLHQ 123
>gi|229012047|ref|ZP_04169226.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
DSM 2048]
gi|228749135|gb|EEL98981.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
DSM 2048]
Length = 198
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 75/133 (56%), Gaps = 9/133 (6%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
I VIP+ T + D+ S L K+RI+ +G V ++A+ L+L+ ED EK
Sbjct: 5 IMSVIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKD 64
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I+LYINS G G T FAI D M +KP + TLC+G A ALLL AGAKG
Sbjct: 65 IFLYINSPG--------GSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGK 116
Query: 196 RAALPSSTIMIKQ 208
R ALP+S IMI Q
Sbjct: 117 RFALPNSEIMIHQ 129
>gi|157364285|ref|YP_001471052.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
lettingae TMO]
gi|167008651|sp|A8F754.1|CLPP_THELT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157314889|gb|ABV33988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
lettingae TMO]
Length = 199
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + V L++A+ L+L+ ED +K I LYINS G G
Sbjct: 23 DIYSRLLKDRIVFLGYAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPG--------GS 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+K + T+CVG A AA+LL +G KG R ALP++ IM+ Q
Sbjct: 75 VTAGLAIYDTMQYIKSDVVTICVGQAASMAAVLLASGTKGKRFALPNARIMLHQ 128
>gi|15606541|ref|NP_213921.1| ATP-dependent Clp protease proteolytic subunit [Aquifex aeolicus
VF5]
gi|6225158|sp|O67357.1|CLPP_AQUAE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|2983755|gb|AAC07315.1| ATP-dependent Clp protease proteolytic subunit [Aquifex aeolicus
VF5]
Length = 201
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV LG V LI+A+ L+L+ +D +K IYLYINS G G
Sbjct: 26 DIYSRLLQDRIVLLGSPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPG--------GS 77
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A+LL AGA G R ALP S IMI Q
Sbjct: 78 VTAGLAIYDTMQYIKPDVVTICMGQAASMGAILLAAGAPGKRYALPHSRIMIHQ 131
>gi|289422712|ref|ZP_06424552.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Peptostreptococcus anaerobius 653-L]
gi|289156891|gb|EFD05516.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Peptostreptococcus anaerobius 653-L]
Length = 194
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG L++A+ L+L+ +D +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGDEVNDQTASLVVAQMLFLEADDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+K + T+CVG A A LL AGAKG R ALP+ST+MI Q
Sbjct: 71 VTAGMAIYDTMQYIKADVSTICVGMAASMGAFLLAAGAKGKRYALPNSTVMIHQ 124
>gi|359299708|ref|ZP_09185547.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
[parainfluenzae] CCUG 13788]
gi|402306845|ref|ZP_10825880.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sputorum HK 2154]
gi|400373868|gb|EJP26793.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sputorum HK 2154]
Length = 197
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 74/133 (55%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+I MV+ TS + D+ S L K RI++L + LI+A+ L+L+ ED EK
Sbjct: 3 LIPMVVEQTSKG---ERSYDIYSRLLKERIIFLNGQVEDQMANLIVAQLLFLEAEDPEKD 59
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINS G G T AIYD M ++KP + TLC G A A LL GAKG
Sbjct: 60 IYLYINSPG--------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGK 111
Query: 196 RAALPSSTIMIKQ 208
R ALP++ +MI Q
Sbjct: 112 RFALPNARVMIHQ 124
>gi|342217854|ref|ZP_08710492.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Megasphaera sp. UPII 135-E]
gi|341592841|gb|EGS35701.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Megasphaera sp. UPII 135-E]
Length = 198
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+L + +++A+ L+L+ ED +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIVFLSGQVEDHMANVLIAQLLFLEAEDPDKDIYLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP I T+C+G+A A++LL AG +G R ALP S +MI Q
Sbjct: 72 VTAGLAIYDTMQYIKPDISTICIGSAASMASVLLAAGTRGKRFALPHSQVMIHQ 125
>gi|325107893|ref|YP_004268961.1| ATP-dependent Clp protease proteolytic subunit ClpP [Planctomyces
brasiliensis DSM 5305]
gi|324968161|gb|ADY58939.1| ATP-dependent Clp protease proteolytic subunit ClpP [Planctomyces
brasiliensis DSM 5305]
Length = 202
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 78/133 (58%), Gaps = 9/133 (6%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+T ++P+ E+ D+ S L K+RI++LG +++ I+A+ LYLQ++D +
Sbjct: 1 MTTLVPYVVEKNGREERAMDIYSRLLKDRIIFLGTQVNDTISNSIVAQLLYLQFDDPKSD 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I++YINS G G T AIYD M ++ + T C+G A A+LL AGA+G
Sbjct: 61 IHMYINSPG--------GSITAGMAIYDTMQFISCDVATYCLGQAASMGAVLLAAGAEGK 112
Query: 196 RAALPSSTIMIKQ 208
RAALP+S IMI Q
Sbjct: 113 RAALPNSRIMIHQ 125
>gi|452824243|gb|EME31247.1| ATP-dependent Clp protease, protease subunit [Galdieria
sulphuraria]
Length = 250
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 80/150 (53%), Gaps = 19/150 (12%)
Query: 71 KPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFL 125
K R + +IP EQ P D+ S L K RI+ L + V L +A+ L
Sbjct: 37 KQRESSFSTLIPMV----LEQTPRGERVFDIYSRLLKERIICLNGTITDDVASLTVAQLL 92
Query: 126 YLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAA 185
+L+ E+ EK +Y+YINS G G T A+YD M Y+ PP+ T+C+G A A+
Sbjct: 93 FLEAENPEKKVYMYINSPG--------GSVTAGLAVYDTMQYISPPVSTICLGQACSMAS 144
Query: 186 LLLGAGAKGNRAALPSSTIMIKQ--AGDTG 213
LLL AG KG R +LP+S IMI Q G TG
Sbjct: 145 LLLAAGEKGERRSLPNSRIMIHQPSGGATG 174
>gi|154249786|ref|YP_001410611.1| ATP-dependent Clp protease proteolytic subunit [Fervidobacterium
nodosum Rt17-B1]
gi|154153722|gb|ABS60954.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium nodosum Rt17-B1]
Length = 206
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + V L++A+ L+L+ E+ +K I LYINS G G
Sbjct: 30 DIYSRLLKDRIIFLGSAIDDHVANLVVAQLLFLEAENPDKDIQLYINSPG--------GL 81
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVK + T+CVG A A+LL AGAKG R ALP+S IMI Q
Sbjct: 82 VTAGLAIYDTMQYVKCDVATICVGQAASMGAVLLAAGAKGKRFALPNSRIMIHQ 135
>gi|423668442|ref|ZP_17643471.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VDM034]
gi|423675431|ref|ZP_17650370.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VDM062]
gi|401301646|gb|EJS07233.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VDM034]
gi|401308455|gb|EJS13850.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VDM062]
Length = 193
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
VIP+ T + D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+L
Sbjct: 3 VIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFL 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T FAI D M +KP + TLC+G A ALLL AGAKG R A
Sbjct: 63 YINSPG--------GSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFA 114
Query: 199 LPSSTIMIKQ 208
LP+S IMI Q
Sbjct: 115 LPNSEIMIHQ 124
>gi|313887837|ref|ZP_07821517.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846180|gb|EFR33561.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Peptoniphilus harei ACS-146-V-Sch2b]
Length = 194
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++L ++ +LI+A+ L+L+ ED K I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLSGEVNDTMADLIVAQLLFLEAEDPNKDIQLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ FAIYD M Y+KP + T+C+G A A LL +GAKG R ALP+S IMI Q
Sbjct: 71 VSAGFAIYDTMNYIKPDVSTICIGMAASMGAFLLASGAKGKRFALPNSDIMIHQ 124
>gi|164686707|ref|ZP_02210735.1| hypothetical protein CLOBAR_00302 [Clostridium bartlettii DSM
16795]
gi|164604097|gb|EDQ97562.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium bartlettii DSM 16795]
Length = 193
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++L + L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLSDEVNDTTASLVVAQLLFLEAEDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 VTAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLNAGAKGKRFALPNSEIMIHQ 124
>gi|428217239|ref|YP_007101704.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
gi|427989021|gb|AFY69276.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
Length = 232
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG ++ LI+++ L+L+ ED EK IYLYINS G G
Sbjct: 48 DIYSRLLRERIVFLGTQVDDNLASLIMSQLLFLEAEDPEKDIYLYINSPG--------GS 99
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD + +V+P + T+C+G A A LL AGAKG R ALP++ IMI Q
Sbjct: 100 VTAGMAIYDTLQHVQPDVSTICMGLAASMGAFLLSAGAKGKRMALPNARIMIHQ 153
>gi|33151467|ref|NP_872820.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus ducreyi
35000HP]
gi|60389738|sp|Q7VP78.1|CLPP_HAEDU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|33147687|gb|AAP95209.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
ducreyi 35000HP]
Length = 197
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 73/133 (54%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
VI MV+ TS + D+ S L K RI++L + LI+A+ L+L+ ED EK
Sbjct: 3 VIPMVVEQTSKG---ERSYDIYSRLLKERIIFLNGEVEDHMANLIVAQLLFLEAEDPEKD 59
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINS G G T AIYD M ++KP + TLC G A A LL G KG
Sbjct: 60 IYLYINSPG--------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGKKGK 111
Query: 196 RAALPSSTIMIKQ 208
R ALP++ +MI Q
Sbjct: 112 RFALPNARVMIHQ 124
>gi|334121380|ref|ZP_08495450.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333455094|gb|EGK83755.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 202
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV+LG + LI+A+ L+L ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRDRIVFLGQQVDSDLANLIVAQLLFLDAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P I T+C+G A A LL AGAKG R +LP S IMI Q
Sbjct: 69 VTAGMGIFDTMNHIRPDICTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
>gi|261415786|ref|YP_003249469.1| endopeptidase Clp [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|385790679|ref|YP_005821802.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261372242|gb|ACX74987.1| Endopeptidase Clp [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326653|gb|ADL25854.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 196
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 79 MVIP-FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M+IP T + D+ S L K RI++LG V ++A+ ++L+YE+ EK I
Sbjct: 1 MIIPTVIETTGRGERAYDIYSRLLKERIIFLGTPINDEVANNVMAQLIFLEYENPEKDIT 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G GY + AIYD M +V+P I T+C+G+ AA+LL AG KG R
Sbjct: 61 LYINSPG--------GYVSAGLAIYDTMQHVRPNIATICIGSCASMAAVLLAAGTKGKRY 112
Query: 198 ALPSSTIMIKQ 208
ALP S IM+ Q
Sbjct: 113 ALPHSRIMLHQ 123
>gi|423487918|ref|ZP_17464600.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BtB2-4]
gi|423493640|ref|ZP_17470284.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
CER057]
gi|423499568|ref|ZP_17476185.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
CER074]
gi|423517516|ref|ZP_17493997.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuA2-4]
gi|423599898|ref|ZP_17575898.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD078]
gi|423662358|ref|ZP_17637527.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VDM022]
gi|401153311|gb|EJQ60738.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
CER057]
gi|401156826|gb|EJQ64228.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
CER074]
gi|401163788|gb|EJQ71133.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuA2-4]
gi|401234585|gb|EJR41063.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD078]
gi|401297977|gb|EJS03582.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VDM022]
gi|402435983|gb|EJV68016.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BtB2-4]
Length = 193
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
VIP+ T + D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+L
Sbjct: 3 VIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFL 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T FAI D M +KP + TLC+G A ALLL AGAKG R A
Sbjct: 63 YINSPG--------GSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFA 114
Query: 199 LPSSTIMIKQ 208
LP+S IMI Q
Sbjct: 115 LPNSEIMIHQ 124
>gi|357059570|ref|ZP_09120412.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas infelix
ATCC 43532]
gi|355371647|gb|EHG18991.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas infelix
ATCC 43532]
Length = 203
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 78/144 (54%), Gaps = 14/144 (9%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIK------Q 208
T AIYD M Y+KP + T+C+G A ++LL AGA G R ALP + IMI Q
Sbjct: 72 VTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQPLGGAQ 131
Query: 209 AGDTGICLLKSSLTWLNSVKLNVL 232
T I + + L V N+L
Sbjct: 132 GQSTDIQIQAKEILRLREVGNNIL 155
>gi|224373739|ref|YP_002608111.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nautilia
profundicola AmH]
gi|223589486|gb|ACM93222.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nautilia
profundicola AmH]
Length = 196
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L V+ +I+A+ L+L+ E+ EK IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIMLQGEINDHVSSIIVAQMLFLEAENPEKDIYLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL +GAKG R ALP + IMI Q
Sbjct: 72 VTSGMAIYDTMNYIKPDVVTICMGQAASMGAFLLSSGAKGKRFALPHARIMIHQ 125
>gi|110596915|ref|ZP_01385205.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
ferrooxidans DSM 13031]
gi|110341602|gb|EAT60062.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
ferrooxidans DSM 13031]
Length = 225
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 77/133 (57%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ MVI TSG + D+ S L + RI++LG V LI+A+ ++L+ ED E+
Sbjct: 28 LVPMVIE-TSGRG--ERAFDIFSRLLRERIIFLGNGIDEHVAGLIMAQLIFLESEDPERD 84
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IY+YINS G G + IYD M Y++P + T+CVG A A LL +GAKG
Sbjct: 85 IYIYINSPG--------GSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKGK 136
Query: 196 RAALPSSTIMIKQ 208
RA+LP S IMI Q
Sbjct: 137 RASLPHSRIMIHQ 149
>gi|56964790|ref|YP_176521.1| ATP-dependent Clp protease proteolytic subunit [Bacillus clausii
KSM-K16]
gi|67460456|sp|Q5WDK0.1|CLPP2_BACSK RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|56911033|dbj|BAD65560.1| ATP-dependent Clp protease proteolytic subunit [Bacillus clausii
KSM-K16]
Length = 195
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+A+ L+LQ ED EK I LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSGVDDNVANSIVAQMLFLQAEDPEKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AGAKG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPDVSTICIGMAASMGAFLLTAGAKGKRMALPNSEVMIHQ 124
>gi|418324661|ref|ZP_12935892.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pettenkoferi VCU012]
gi|365225160|gb|EHM66411.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pettenkoferi VCU012]
Length = 194
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDADKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ FAIYD + ++KP + T+CVG A + LL AGAKG R ALP++ +MI Q
Sbjct: 71 VSAGFAIYDTIQHIKPDVQTICVGMAASMGSFLLAAGAKGKRYALPNAEVMIHQ 124
>gi|148381180|ref|YP_001255721.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A str. ATCC 3502]
gi|153933152|ref|YP_001385555.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A str. ATCC 19397]
gi|153934525|ref|YP_001388961.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A str. Hall]
gi|153939192|ref|YP_001392582.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum F str. Langeland]
gi|168179119|ref|ZP_02613783.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum NCTC 2916]
gi|168183548|ref|ZP_02618212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum Bf]
gi|170754567|ref|YP_001782870.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum B1 str. Okra]
gi|226950659|ref|YP_002805750.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A2 str. Kyoto]
gi|237796687|ref|YP_002864239.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum Ba4 str. 657]
gi|384463549|ref|YP_005676144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum F str. 230613]
gi|387819501|ref|YP_005679848.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum H04402 065]
gi|421839011|ref|ZP_16272698.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum CFSAN001627]
gi|429247534|ref|ZP_19210776.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum CFSAN001628]
gi|166201814|sp|A7FYI2.1|CLPP_CLOB1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201815|sp|A5I6W1.1|CLPP_CLOBH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201816|sp|A7GIH2.1|CLPP_CLOBL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706445|sp|B1IND7.1|CLPP_CLOBK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763786|sp|C1FLA6.1|CLPP_CLOBJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148290664|emb|CAL84793.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A str. ATCC 3502]
gi|152929196|gb|ABS34696.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A str. ATCC 19397]
gi|152930439|gb|ABS35938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A str. Hall]
gi|152935088|gb|ABS40586.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum F str. Langeland]
gi|169119779|gb|ACA43615.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum B1 str. Okra]
gi|182670165|gb|EDT82141.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum NCTC 2916]
gi|182673367|gb|EDT85328.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum Bf]
gi|226842960|gb|ACO85626.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A2 str. Kyoto]
gi|229261301|gb|ACQ52334.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum Ba4 str. 657]
gi|295320566|gb|ADG00944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum F str. 230613]
gi|322807545|emb|CBZ05120.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum H04402 065]
gi|409736336|gb|EKN37768.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum CFSAN001627]
gi|428755428|gb|EKX78057.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum CFSAN001628]
Length = 194
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L + LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG A A LL AGAKG R ALP+S +MI Q
Sbjct: 71 ITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQ 124
>gi|300865787|ref|ZP_07110541.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
gi|300336200|emb|CBN55696.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
Length = 203
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV+LG + LI+A+ L+L ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRDRIVFLGQQVTSDLANLIVAQLLFLDAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P + T+C+G A A LL AGAKG R LP S IMI Q
Sbjct: 69 VTAGMGIFDTMNHIRPEVSTICLGLAASMGAFLLSAGAKGKRMTLPHSRIMIHQ 122
>gi|401565794|ref|ZP_10806612.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC6]
gi|400185000|gb|EJO19235.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC6]
Length = 203
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 78/144 (54%), Gaps = 14/144 (9%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIK------Q 208
T AIYD M Y+KP + T+C+G A ++LL AGA G R ALP + IMI Q
Sbjct: 72 VTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQPLGGAQ 131
Query: 209 AGDTGICLLKSSLTWLNSVKLNVL 232
T I + + L V N+L
Sbjct: 132 GQSTDIQIQAKEILRLREVGNNIL 155
>gi|423510774|ref|ZP_17487305.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuA2-1]
gi|402453727|gb|EJV85527.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuA2-1]
Length = 193
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
VIP+ T + D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+L
Sbjct: 3 VIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFL 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T FAI D M +KP + TLC+G A ALLL AGAKG R A
Sbjct: 63 YINSPG--------GSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFA 114
Query: 199 LPSSTIMIKQ 208
LP+S IMI Q
Sbjct: 115 LPNSEIMIHQ 124
>gi|354586092|ref|ZP_09004765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
gi|353183068|gb|EHB48600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
Length = 198
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V I+A+ L+L ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AI+D M ++KP + T+CVG A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGMAIFDTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYALPNSEIMIHQ 124
>gi|78186273|ref|YP_374316.1| peptidase S14, ClpP [Chlorobium luteolum DSM 273]
gi|115311788|sp|Q3B5V8.1|CLPP_PELLD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78166175|gb|ABB23273.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
luteolum DSM 273]
Length = 225
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 79/136 (58%), Gaps = 11/136 (8%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
++ ++ MVI TSG + D+ S L + RI++LG V LI+A+ ++L+ ED
Sbjct: 25 QNSLVPMVIE-TSGRG--ERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDP 81
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
E+ IY+Y+NS G G + IYD M Y++P + T+CVG A A LL +GA
Sbjct: 82 ERDIYIYVNSPG--------GSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGA 133
Query: 193 KGNRAALPSSTIMIKQ 208
KG RA+LP S IMI Q
Sbjct: 134 KGKRASLPHSRIMIHQ 149
>gi|423593290|ref|ZP_17569321.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD048]
gi|401226956|gb|EJR33486.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD048]
Length = 193
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
VIP+ T + D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+L
Sbjct: 3 VIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDTEKDIFL 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T FAI D M +KP + TLC+G A ALLL AGAKG R A
Sbjct: 63 YINSPG--------GSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFA 114
Query: 199 LPSSTIMIKQ 208
LP+S IMI Q
Sbjct: 115 LPNSEIMIHQ 124
>gi|282850557|ref|ZP_06259936.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula ATCC 17745]
gi|294792182|ref|ZP_06757330.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 6_1_27]
gi|294794047|ref|ZP_06759184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 3_1_44]
gi|417001079|ref|ZP_11940993.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella parvula ACS-068-V-Sch12]
gi|282580050|gb|EFB85454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula ATCC 17745]
gi|294455617|gb|EFG23989.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 3_1_44]
gi|294457412|gb|EFG25774.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 6_1_27]
gi|333975562|gb|EGL76441.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella parvula ACS-068-V-Sch12]
Length = 197
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V ++A+ L+L+ ED +K I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG+A A+LL AG KG R ALP + IMI Q
Sbjct: 70 VTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGTKGKRYALPHARIMIHQ 123
>gi|158522703|ref|YP_001530573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
gi|259585950|sp|A8ZXB7.1|CLPP_DESOH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|158511529|gb|ABW68496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
Length = 205
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 77/134 (57%), Gaps = 11/134 (8%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P+I MVI TS + D+ S L K+RIV++G + L++A+ L+L+ ED +K
Sbjct: 2 PLIPMVIEQTS---RGERAFDIYSRLLKDRIVFIGSAIDDETANLLIAQLLFLESEDPDK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I YINS G G + AIYD M Y+K I T+C+G+A A LL AGAKG
Sbjct: 59 DINFYINSPG--------GKVSAGMAIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKG 110
Query: 195 NRAALPSSTIMIKQ 208
R +LP+S IMI Q
Sbjct: 111 KRFSLPNSRIMIHQ 124
>gi|86605879|ref|YP_474642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-3-3Ab]
gi|115311348|sp|Q2JV68.1|CLPP2_SYNJA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86554421|gb|ABC99379.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-3-3Ab]
Length = 200
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI++LG + LI+A+ LYL+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
AIYD M +++P + T+C+G A A LL GAKG R ALP + IMI Q
Sbjct: 69 VYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMIHQ 122
>gi|121534156|ref|ZP_01665981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
gi|121307259|gb|EAX48176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
Length = 203
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++G V L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIVFIGGPIDDHVANLVIAQLLFLESEDPDKDIHLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G+A AA+LL AGA G R ALP + +MI Q
Sbjct: 71 VTAGLAIYDTMQYIKPDVSTICLGSAASMAAVLLAAGAPGKRYALPYARVMIHQ 124
>gi|429728764|ref|ZP_19263468.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Peptostreptococcus anaerobius VPI 4330]
gi|429147739|gb|EKX90761.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Peptostreptococcus anaerobius VPI 4330]
Length = 217
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG L++A+ L+L+ +D +K I+LYINS G G
Sbjct: 42 DIYSRLLKDRIIFLGDEVNDQTASLVVAQMLFLEADDPDKDIHLYINSPG--------GS 93
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+K + T+CVG A A LL AGAKG R ALP+ST+MI Q
Sbjct: 94 VTAGMAIYDTMQYIKADVSTICVGMAASMGAFLLAAGAKGKRYALPNSTVMIHQ 147
>gi|269798318|ref|YP_003312218.1| ATP-dependent Clp protease proteolytic subunit ClpP [Veillonella
parvula DSM 2008]
gi|269094947|gb|ACZ24938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula DSM 2008]
Length = 197
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V ++A+ L+L+ ED +K I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG+A A+LL AG KG R ALP + IMI Q
Sbjct: 70 VTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGTKGKRYALPHARIMIHQ 123
>gi|334128684|ref|ZP_08502565.1| ATP-dependent Clp protease, protease subunit [Centipeda periodontii
DSM 2778]
gi|333386421|gb|EGK57635.1| ATP-dependent Clp protease, protease subunit [Centipeda periodontii
DSM 2778]
Length = 203
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 78/144 (54%), Gaps = 14/144 (9%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIK------Q 208
T AIYD M Y+KP + T+C+G A ++LL AGA G R ALP + IMI Q
Sbjct: 72 VTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQPLGGAQ 131
Query: 209 AGDTGICLLKSSLTWLNSVKLNVL 232
T I + + L V N+L
Sbjct: 132 GQSTDIQIQAKEILRLREVGNNIL 155
>gi|297808311|ref|XP_002872039.1| hypothetical protein ARALYDRAFT_910322 [Arabidopsis lyrata subsp.
lyrata]
gi|297317876|gb|EFH48298.1| hypothetical protein ARALYDRAFT_910322 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 84/146 (57%), Gaps = 12/146 (8%)
Query: 64 PDSFCKSKPRS-PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILA 122
P S + RS +I MVI +S + D+ S L K RI+ + + +++A
Sbjct: 15 PSSSIATARRSYSLIPMVIEHSS---RGERAYDIFSRLLKERIICINGPINDDTSHVVVA 71
Query: 123 EFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWG 182
+ LYL+ E+ KPI++Y+NS G G+ T AIYD M Y++ PI T+C+G A
Sbjct: 72 QLLYLESENPSKPIHMYLNSPG--------GHVTAGLAIYDTMQYIRSPISTICLGQAAS 123
Query: 183 EAALLLGAGAKGNRAALPSSTIMIKQ 208
A+LLL AGAKG R +LP++T+MI Q
Sbjct: 124 MASLLLAAGAKGQRRSLPNATVMIHQ 149
>gi|308067009|ref|YP_003868614.1| ATP-dependent Clp protease proteolytic subunit(endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|305856288|gb|ADM68076.1| ATP-dependent Clp protease proteolytic subunit(Endopeptidase Clp)
[Paenibacillus polymyxa E681]
Length = 193
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V I+A+ L+L ED EK I+LYINS G G
Sbjct: 14 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPG--------GS 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AI+D M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI Q
Sbjct: 66 ITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQ 119
>gi|406908934|gb|EKD49303.1| ATP-dependent Clp protease proteolytic subunit, partial [uncultured
bacterium]
Length = 147
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
+A+ + D+ S L K+RIV+LG V +I+A+ L+L+ ED K I+ Y+NS G
Sbjct: 11 SAYGERAYDIYSRLLKDRIVFLGGQIDDQVANIIIAQMLFLESEDKNKDIHFYVNSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M ++KP I T+CVG A + LL +G KG R ALP+S IMI
Sbjct: 69 ------GVVTAGLAIYDTMQHIKPDISTICVGLAASMGSFLLASGTKGKRFALPNSEIMI 122
Query: 207 KQ 208
Q
Sbjct: 123 HQ 124
>gi|57242492|ref|ZP_00370430.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
upsaliensis RM3195]
gi|57016777|gb|EAL53560.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
upsaliensis RM3195]
Length = 194
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M IP+ T+ + D+ S L K+RIV L V I+A+ L+L+ ED +K IY
Sbjct: 1 MYIPYVIEKTSRGERSYDIYSRLLKDRIVMLSGEINDDVASSIVAQLLFLEAEDPQKDIY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T F+IYD M Y+KP + T+C+G A A LL GAK R
Sbjct: 61 LYINSPG--------GVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAKQKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 113 ALPNSRIMIHQ 123
>gi|163940539|ref|YP_001645423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
weihenstephanensis KBAB4]
gi|423365465|ref|ZP_17342898.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD142]
gi|163862736|gb|ABY43795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
weihenstephanensis KBAB4]
gi|401090832|gb|EJP98984.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD142]
Length = 193
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
VIP+ T + D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+L
Sbjct: 3 VIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFL 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T FAI D M +KP + TLC+G A ALLL AGAKG R A
Sbjct: 63 YINSPG--------GSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFA 114
Query: 199 LPSSTIMIKQ 208
LP+S IMI Q
Sbjct: 115 LPNSEIMIHQ 124
>gi|315639062|ref|ZP_07894230.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
upsaliensis JV21]
gi|315480838|gb|EFU71474.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
upsaliensis JV21]
Length = 194
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M IP+ T+ + D+ S L K+RIV L V I+A+ L+L+ ED +K IY
Sbjct: 1 MYIPYVIEKTSRGERSYDIYSRLLKDRIVMLSGEINDDVASSIVAQLLFLEAEDPQKDIY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T F+IYD M Y+KP + T+C+G A A LL GAK R
Sbjct: 61 LYINSPG--------GVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAKQKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 113 ALPNSRIMIHQ 123
>gi|336430079|ref|ZP_08610035.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
gi|336001250|gb|EGN31395.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
Length = 200
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + L++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDTTASLVVAQLLFLEAEDTEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M +VK + T+C+G A A LL GAKG R ALP++ IMI Q
Sbjct: 71 VTAGMAIYDTMQFVKCDVSTICIGMAASMGAFLLAGGAKGKRMALPNAEIMIHQ 124
>gi|374295111|ref|YP_005045302.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
clariflavum DSM 19732]
gi|359824605|gb|AEV67378.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
clariflavum DSM 19732]
Length = 194
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L + L++A+ L+L+ ED +K I LYINS G G
Sbjct: 19 DIFSRLLKDRIIVLSDEINDATASLVVAQMLFLEAEDPDKDIQLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ FAIYD M YVKP + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 VSAGFAIYDTMQYVKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQ 124
>gi|337288342|ref|YP_004627814.1| ATP-dependent Clp protease proteolytic subunit
[Thermodesulfobacterium sp. OPB45]
gi|334902080|gb|AEH22886.1| ATP-dependent Clp protease proteolytic subunit
[Thermodesulfobacterium geofontis OPF15]
Length = 194
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV++G + +V L++A+ LYL+ ED +K I LYINS G G
Sbjct: 20 DIYSRLLKERIVFIGTTIDENVANLVIAQLLYLEAEDPDKDIMLYINSPG--------GL 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD + Y+KP + T+CVG A AA+LL AG KG R AL S IM+ Q
Sbjct: 72 VTAGLAIYDTIQYIKPDVCTICVGQAASMAAVLLAAGTKGKRYALRHSRIMLHQ 125
>gi|268680774|ref|YP_003305205.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfurospirillum deleyianum DSM 6946]
gi|268618805|gb|ACZ13170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurospirillum deleyianum DSM 6946]
Length = 196
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L V I+A+ L+L+ ED EK IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIMLSGEINDVVASSIVAQLLFLEAEDPEKDIYLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T F+IYD M Y+KP I T+C+G A A LL AG KG R ALP++ IMI Q
Sbjct: 72 ITSGFSIYDTMNYIKPDISTICIGQAASMGAFLLSAGTKGKRYALPNARIMIHQ 125
>gi|421858505|ref|ZP_16290772.1| Clp protease [Paenibacillus popilliae ATCC 14706]
gi|410831950|dbj|GAC41209.1| Clp protease [Paenibacillus popilliae ATCC 14706]
Length = 192
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V I+A+ L+LQ +D +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSQVNDMVANSIIAQMLFLQADDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+CVG A A LL AG+KG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLNAGSKGKRFALPNSEIMIHQ 124
>gi|134300401|ref|YP_001113897.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
reducens MI-1]
gi|172044337|sp|A4J7L9.1|CLPP_DESRM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134053101|gb|ABO51072.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfotomaculum reducens MI-1]
Length = 195
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + L++A+FL+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A + LL AGA G R ALP + IMI Q
Sbjct: 72 VTAGLAIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAPGKRYALPMARIMIHQ 125
>gi|428216584|ref|YP_007101049.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
gi|427988366|gb|AFY68621.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
Length = 197
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 79/146 (54%), Gaps = 13/146 (8%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG +V+ LI+A+ L+L+ ED EK IYLY+NS G G
Sbjct: 17 DIFSRLLRERIVFLGQQVDDTVSNLIVAQMLFLEAEDPEKDIYLYVNSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ-----A 209
T AIYD M +++P + T+CVG A A LL GA G R +LP + IMI Q
Sbjct: 69 VTAGMAIYDTMQHIQPDVSTICVGLAASMGAFLLAGGAAGKRLSLPHTRIMIHQPLGGAQ 128
Query: 210 GDTGICLLKSSLTWLNSVKLNVLILS 235
G +++ + +LN L+ S
Sbjct: 129 GQAADIEIQAKEILYHKQRLNELLAS 154
>gi|78778230|ref|YP_394545.1| ATP-dependent Clp protease proteolytic subunit [Sulfurimonas
denitrificans DSM 1251]
gi|124015202|sp|Q30NX1.1|CLPP_SULDN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78498770|gb|ABB45310.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfurimonas
denitrificans DSM 1251]
Length = 196
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 72/129 (55%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ TA + D+ S L K+RI+ L +V I+A+ L+L+ ED EK IY Y
Sbjct: 4 IPYVVEKTARGERSYDIYSRLLKDRIIMLSGEVNDAVASSIVAQMLFLEAEDPEKDIYFY 63
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T AIYD M Y++P + T+CVG A A LL +GAKG R AL
Sbjct: 64 INSPG--------GVVTAGMAIYDTMNYIRPDVATICVGQAASMGAFLLSSGAKGKRYAL 115
Query: 200 PSSTIMIKQ 208
P + IMI Q
Sbjct: 116 PHARIMIHQ 124
>gi|354559730|ref|ZP_08978975.1| ATP-dependent Clp protease proteolytic subunit [Desulfitobacterium
metallireducens DSM 15288]
gi|353540550|gb|EHC10024.1| ATP-dependent Clp protease proteolytic subunit [Desulfitobacterium
metallireducens DSM 15288]
Length = 204
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V LI+A+ L+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGPIDDDVANLIVAQLLFLEAEDPEKDIFLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M Y++P + T+CVG A A LL +GAKG R ALP++ I+I Q
Sbjct: 72 ISAGMAIYDTMQYIRPDVHTICVGLAASMGAFLLTSGAKGKRTALPNAEILIHQ 125
>gi|387127882|ref|YP_006296487.1| ATP-dependent Clp protease proteolytic subunit [Methylophaga sp.
JAM1]
gi|386274944|gb|AFI84842.1| ATP-dependent Clp protease proteolytic subunit [Methylophaga sp.
JAM1]
Length = 211
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 79/140 (56%), Gaps = 9/140 (6%)
Query: 70 SKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
S+ +PV ++P TA + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 6 SEQLNPVQNALVPIVVEQTARGERSYDIYSRLLKERIIFLVGQVEDHMANLIVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ +K I+LYINS G G T AIYD M ++KP + TLC+G A ALLL
Sbjct: 66 SENPDKDIHLYINSPG--------GAVTAGLAIYDTMQFIKPQVSTLCIGQAASMGALLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
AGAK R ALP+S IM+ Q
Sbjct: 118 TAGAKDKRFALPNSRIMVHQ 137
>gi|315127189|ref|YP_004069192.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
sp. SM9913]
gi|315015703|gb|ADT69041.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
sp. SM9913]
Length = 205
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 78/139 (56%), Gaps = 11/139 (7%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P + ++ MV+ TA + D+ S L K RI++L ++ LILA+ L+L+
Sbjct: 6 TDPLNALVPMVV---EQTAKGERSFDIYSRLLKERIIFLTGQVEDNMANLILAQMLFLES 62
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK I+LYINS G G T AIYD M ++KP + T+CVG A A LL
Sbjct: 63 ENPEKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMGAFLLS 114
Query: 190 AGAKGNRAALPSSTIMIKQ 208
GAKG R LP+S +MI Q
Sbjct: 115 GGAKGKRFCLPNSRVMIHQ 133
>gi|390941424|ref|YP_006405161.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfurospirillum barnesii SES-3]
gi|390194531|gb|AFL69586.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfurospirillum barnesii SES-3]
Length = 196
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L +V I+A+ L+L+ ED EK IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIMLSGEINDAVASSIVAQLLFLEAEDPEKDIYLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T F+IYD M Y+KP I T+C+G A A LL +G KG R ALP++ IMI Q
Sbjct: 72 ITSGFSIYDTMNYIKPDISTICIGQAASMGAFLLSSGTKGKRYALPNARIMIHQ 125
>gi|423419205|ref|ZP_17396294.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG3X2-1]
gi|401105811|gb|EJQ13778.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG3X2-1]
Length = 193
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
VIP+ T + D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+L
Sbjct: 3 VIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFL 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T FAI D M +KP + TLC+G A ALLL AGAKG R A
Sbjct: 63 YINSPG--------GSTTAGFAILDTMNLIKPHVQTLCMGFAASFGALLLLAGAKGKRFA 114
Query: 199 LPSSTIMIKQ 208
LP+S IMI Q
Sbjct: 115 LPNSEIMIHQ 124
>gi|417852109|ref|ZP_12497751.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
gi|338217778|gb|EGP03617.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
Length = 193
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 73/133 (54%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
VI MV+ TA + D+ S L K R+++LG + LI+A+ L+L+ ED EK
Sbjct: 3 VIPMVV---EQTARGERSYDIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKD 59
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I +YINS G G T AIYD M +VKP I TLCVG A A LL G G
Sbjct: 60 INIYINSPG--------GSVTAGMAIYDTMQFVKPDIRTLCVGQACSMGAFLLAGGTAGK 111
Query: 196 RAALPSSTIMIKQ 208
R ALPS+ +MI Q
Sbjct: 112 RIALPSARVMIHQ 124
>gi|390456222|ref|ZP_10241750.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
peoriae KCTC 3763]
Length = 198
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V I+A+ L+L ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AI+D M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQ 124
>gi|239907453|ref|YP_002954194.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
magneticus RS-1]
gi|259585949|sp|C4XH03.1|CLPP_DESMR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|239797319|dbj|BAH76308.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
magneticus RS-1]
Length = 202
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI+ LG + V LI A+ L+L+ ED EK I++YINS G G
Sbjct: 19 DIYSRLLRDRIILLGSAVDDYVANLICAQLLFLESEDPEKEIFMYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M YV PP+ TLC+G A ALLL AGA G R ALP S IMI Q
Sbjct: 71 VSAGLAIYDTMQYVMPPVSTLCLGQAASMGALLLCAGATGMRYALPHSRIMIHQ 124
>gi|443327406|ref|ZP_21056031.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
gi|442792934|gb|ELS02396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
Length = 201
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG ++ L++A+ LYL+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVTDEISNLVVAQLLYLEAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ ++D M V+P + T+C+G A A LL AGAKG R +LP+S IMI Q
Sbjct: 69 VSAGMGMFDTMNQVRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQ 122
>gi|310639654|ref|YP_003944412.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|386038858|ref|YP_005957812.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
gi|309244604|gb|ADO54171.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|343094896|emb|CCC83105.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
Length = 198
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V I+A+ L+L ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AI+D M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQ 124
>gi|228474429|ref|ZP_04059164.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis SK119]
gi|314936932|ref|ZP_07844279.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis subsp. hominis C80]
gi|418619476|ref|ZP_13182304.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis VCU122]
gi|228271788|gb|EEK13135.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis SK119]
gi|313655551|gb|EFS19296.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis subsp. hominis C80]
gi|374824522|gb|EHR88480.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis VCU122]
Length = 195
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD + ++KP + T+C+G A + LL AG KG R ALP++ +MI Q
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGTKGKRFALPNAEVMIHQ 124
>gi|206896158|ref|YP_002247153.1| Clp protease [Coprothermobacter proteolyticus DSM 5265]
gi|206738775|gb|ACI17853.1| Clp protease [Coprothermobacter proteolyticus DSM 5265]
Length = 199
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV++ P + +++A+ L+L+ ED ++ IY+YINS G G
Sbjct: 20 DIYSRLLRDRIVFINGEIEPEMAGVVIAQLLFLEAEDPKRDIYVYINSPG--------GI 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T+ AIYD M Y++P + T+C+G A AA+LL AG KG R ALP+S I++ Q
Sbjct: 72 VTDGLAIYDTMQYIEPDVVTMCIGQAASMAAILLAAGTKGKRFALPNSRILLHQ 125
>gi|94987236|ref|YP_595169.1| protease subunit of ATP-dependent Clp proteases [Lawsonia
intracellularis PHE/MN1-00]
gi|442556076|ref|YP_007365901.1| ATP-dependent Clp protease, proteolytic subunit [Lawsonia
intracellularis N343]
gi|116243147|sp|Q1MQ79.1|CLPP_LAWIP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|94731485|emb|CAJ54848.1| Protease subunit of ATP-dependent Clp proteases [Lawsonia
intracellularis PHE/MN1-00]
gi|441493523|gb|AGC50217.1| ATP-dependent Clp protease, proteolytic subunit [Lawsonia
intracellularis N343]
Length = 209
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 74 SPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
+ M +P + D+ S L K+RIV LG V LI A+ L+L+ +D
Sbjct: 2 DDIFNMTVPIVVENNGRNERAYDIYSRLLKDRIVLLGTEVNDQVASLICAQLLFLESQDP 61
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
EK IYLYINS G G T AIYD M Y+ P + T+C+G A ALLL AG
Sbjct: 62 EKEIYLYINSPG--------GSVTAGLAIYDTMNYITPNVATVCMGRAASMGALLLAAGE 113
Query: 193 KGNRAALPSSTIMIKQ 208
K R ALP+S +MI Q
Sbjct: 114 KNMRYALPNSQVMIHQ 129
>gi|56751582|ref|YP_172283.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81301346|ref|YP_401554.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|18203213|sp|Q9L4P3.1|CLPP3_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|67460443|sp|Q5N1Q7.1|CLPP2_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|7106112|emb|CAB75988.1| ATP-dependent Clp protease third proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|56686541|dbj|BAD79763.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81170227|gb|ABB58567.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
elongatus PCC 7942]
Length = 199
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 75/140 (53%), Gaps = 13/140 (9%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P + +P +S W D+ + L RI++LG + I+A+ LYL ED K
Sbjct: 6 PSVPYRLPGSSFERW----IDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSK 61
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
PIYLYINS G G T AIYD M Y+K P+ T+C+G A A LL AG+KG
Sbjct: 62 PIYLYINSPG--------GSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKG 113
Query: 195 NRAALPSSTIMIKQ-AGDTG 213
R ALP S IMI Q G TG
Sbjct: 114 KRLALPHSRIMIHQPLGGTG 133
>gi|428311957|ref|YP_007122934.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
gi|428253569|gb|AFZ19528.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
Length = 202
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQPVDSDLANLIVAQLLFLEAEDAEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M V+P + T+CVG A A LL AGAKG R +LP S IMI Q
Sbjct: 69 VTAGMGIFDTMNQVRPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
>gi|39996891|ref|NP_952842.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
sulfurreducens PCA]
gi|409912312|ref|YP_006890777.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sulfurreducens KN400]
gi|60389697|sp|Q74C82.1|CLPP_GEOSL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|39983779|gb|AAR35169.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sulfurreducens PCA]
gi|298505904|gb|ADI84627.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sulfurreducens KN400]
Length = 199
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T + D+ S L K+RI++LG V L++A+ L+L+ ED +K I+
Sbjct: 1 MLVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGPVDDHVANLVIAQMLFLEAEDPDKDIH 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+K P+ T+CVG A ALLL G KG R
Sbjct: 61 LYINSPG--------GVVTSGMAIYDTMQYIKAPVSTICVGQAASMGALLLSGGEKGKRF 112
Query: 198 ALPSSTIMIKQ 208
+L S IMI Q
Sbjct: 113 SLKHSRIMIHQ 123
>gi|115374875|ref|ZP_01462148.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|115368093|gb|EAU67055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
Length = 204
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M IP+ T + D+ S L K+RIV LG V+ I+++ L+L+ ED +K I
Sbjct: 1 MPIPYVIEQTHRGERSYDIYSRLLKDRIVMLGTEIDDDVSNAIVSQLLFLESEDPDKDIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M YVK P+ T+C+G A A+LL AGAKG R
Sbjct: 61 LYINSPG--------GSVTAGLAIYDTMQYVKCPVSTICIGQAASMGAVLLLAGAKGKRY 112
Query: 198 ALPSSTIMIKQ 208
+LPSS IMI Q
Sbjct: 113 SLPSSRIMIHQ 123
>gi|313892932|ref|ZP_07826509.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. oral taxon 158 str. F0412]
gi|313442285|gb|EFR60700.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. oral taxon 158 str. F0412]
Length = 197
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V ++A+ L+L+ ED +K I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG+A A+LL AG KG R ALP + +MI Q
Sbjct: 70 VTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGTKGKRYALPHARVMIHQ 123
>gi|375306341|ref|ZP_09771639.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus sp.
Aloe-11]
gi|375081594|gb|EHS59804.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus sp.
Aloe-11]
Length = 198
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V I+A+ L+L ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AI+D M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQ 124
>gi|15603841|ref|NP_246915.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Pm70]
gi|378774981|ref|YP_005177224.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida 36950]
gi|383310944|ref|YP_005363754.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. HN06]
gi|386834993|ref|YP_006240310.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pasteurella
multocida subsp. multocida str. 3480]
gi|417854851|ref|ZP_12500118.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_goat]
gi|421255199|ref|ZP_15709765.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_buffalo]
gi|421262286|ref|ZP_15713573.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_cattle]
gi|421264724|ref|ZP_15715690.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. P52VAC]
gi|425064713|ref|ZP_18467838.1| ATP-dependentlp protease proteolytic subunit [Pasteurella multocida
subsp. gallicida X73]
gi|18202809|sp|Q9CJM2.1|CLPP_PASMU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|12722415|gb|AAK04060.1| ClpP [Pasteurella multocida subsp. multocida str. Pm70]
gi|338217272|gb|EGP03161.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_goat]
gi|356597529|gb|AET16255.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida 36950]
gi|380872216|gb|AFF24583.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. HN06]
gi|385201696|gb|AFI46551.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pasteurella
multocida subsp. multocida str. 3480]
gi|401687836|gb|EJS83533.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. P52VAC]
gi|401689639|gb|EJS85037.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_cattle]
gi|401690987|gb|EJS86083.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_buffalo]
gi|404380899|gb|EJZ77388.1| ATP-dependentlp protease proteolytic subunit [Pasteurella multocida
subsp. gallicida X73]
Length = 193
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 73/133 (54%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
VI MV+ TA + D+ S L K R+++LG + LI+A+ L+L+ ED EK
Sbjct: 3 VIPMVV---EQTARGERSYDIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKD 59
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I +YINS G G T AIYD M +VKP I TLCVG A A LL G G
Sbjct: 60 INIYINSPG--------GSVTAGMAIYDTMQFVKPDIRTLCVGQACSMGAFLLAGGTAGK 111
Query: 196 RAALPSSTIMIKQ 208
R ALPS+ +MI Q
Sbjct: 112 RIALPSARVMIHQ 124
>gi|194337396|ref|YP_002019190.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309873|gb|ACF44573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelodictyon
phaeoclathratiforme BU-1]
Length = 225
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 77/133 (57%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ MVI TSG + D+ S L + RI++LG V LI+A+ ++L+ ED E+
Sbjct: 28 LVPMVIE-TSGRG--ERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPERD 84
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IY+Y+NS G G + IYD M Y++P + T+CVG A A LL +GAKG
Sbjct: 85 IYIYVNSPG--------GSVSAGLGIYDTMQYIRPEVSTVCVGMAASMGAFLLASGAKGK 136
Query: 196 RAALPSSTIMIKQ 208
RA+LP S IMI Q
Sbjct: 137 RASLPHSRIMIHQ 149
>gi|431795130|ref|YP_007222035.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430785356|gb|AGA70639.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 202
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V +I+A+ L+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGPVSDDVANVIVAQLLFLEAEDPEKDIFLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M Y++P + T+CVG A A LL AGAKG R ALP++ I+I Q
Sbjct: 72 ISAGMAIYDTMQYIRPDVHTICVGLAASMGAFLLTAGAKGKRTALPNAEILIHQ 125
>gi|125975222|ref|YP_001039132.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum ATCC 27405]
gi|256003116|ref|ZP_05428108.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 2360]
gi|281419196|ref|ZP_06250212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum JW20]
gi|385777706|ref|YP_005686871.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 1313]
gi|419722741|ref|ZP_14249878.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum AD2]
gi|419726242|ref|ZP_14253265.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum YS]
gi|166201818|sp|A3DJ10.1|CLPP_CLOTH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|125715447|gb|ABN53939.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum ATCC 27405]
gi|255992807|gb|EEU02897.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 2360]
gi|281407062|gb|EFB37324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum JW20]
gi|316939386|gb|ADU73420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 1313]
gi|380770294|gb|EIC04191.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum YS]
gi|380781121|gb|EIC10782.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum AD2]
Length = 194
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L L++A+ L+L+ ED +K I LYINS G G
Sbjct: 19 DIYSRLLKDRIIVLSDEINDVTASLVVAQMLFLEAEDPDKDIQLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD M YVKP + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 VTAGFAIYDTMQYVKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQ 124
>gi|18420643|ref|NP_568427.1| ATP-dependent Clp protease proteolytic subunit 2 [Arabidopsis
thaliana]
gi|75309225|sp|Q9FN42.1|CLPP2_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial; AltName: Full=Endopeptidase ClpP2;
AltName: Full=nClpP7; Flags: Precursor
gi|9759372|dbj|BAB09831.1| ATP-dependent protease proteolytic subunit ClpP-like protein
[Arabidopsis thaliana]
gi|26452073|dbj|BAC43126.1| putative ATP-dependent protease proteolytic subunit ClpP
[Arabidopsis thaliana]
gi|28950803|gb|AAO63325.1| At5g23140 [Arabidopsis thaliana]
gi|332005743|gb|AED93126.1| ATP-dependent Clp protease proteolytic subunit 2 [Arabidopsis
thaliana]
Length = 241
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 79/133 (59%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+I MVI +S + D+ S L K RI+ + + +++A+ LYL+ E+ KP
Sbjct: 32 LIPMVIEHSS---RGERAYDIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKP 88
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I++Y+NS G G+ T AIYD M Y++ PI T+C+G A A+LLL AGAKG
Sbjct: 89 IHMYLNSPG--------GHVTAGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQ 140
Query: 196 RAALPSSTIMIKQ 208
R +LP++T+MI Q
Sbjct: 141 RRSLPNATVMIHQ 153
>gi|258514515|ref|YP_003190737.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum acetoxidans DSM 771]
gi|257778220|gb|ACV62114.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum acetoxidans DSM 771]
Length = 194
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G LI+A+ L+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFIGGPIEDYTANLIIAQLLFLEAEDPEKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KPP+ T+C+G A + LL AGA G R ALP + IMI Q
Sbjct: 72 VTAGMAIYDTMQYIKPPVSTICLGQAASMGSFLLAAGAPGKRFALPYARIMIHQ 125
>gi|118579613|ref|YP_900863.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
propionicus DSM 2379]
gi|166201831|sp|A1AN85.1|CLPP_PELPD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118502323|gb|ABK98805.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pelobacter
propionicus DSM 2379]
Length = 199
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG V LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 18 DIYSRLLKERIIFLGGGIDDQVANLIIAQLLFLEAEDPDKDIHLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+K P+ T+CVG A A+LL AG KG R +L S IMI Q
Sbjct: 70 VTSGMAIYDTMRYIKAPVSTICVGQAASMGAVLLAAGEKGKRFSLNHSRIMIHQ 123
>gi|393199477|ref|YP_006461319.1| protease subunit of ATP-dependent Clp protease [Solibacillus
silvestris StLB046]
gi|406666669|ref|ZP_11074434.1| ATP-dependent Clp protease proteolytic subunit [Bacillus isronensis
B3W22]
gi|327438808|dbj|BAK15173.1| protease subunit of ATP-dependent Clp protease [Solibacillus
silvestris StLB046]
gi|405385439|gb|EKB44873.1| ATP-dependent Clp protease proteolytic subunit [Bacillus isronensis
B3W22]
Length = 196
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRIILLGSGIDDNVANSIVAQLLFLEAEDPDKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AGAKG R +LP++ +MI Q
Sbjct: 71 ITSGMAIYDTMNFIKPDVSTICIGMAASMGAFLLSAGAKGKRVSLPNAEVMIHQ 124
>gi|295696500|ref|YP_003589738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
gi|295412102|gb|ADG06594.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
Length = 192
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V ++A+ L+L ED EK + LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTPIDDQVANSVIAQLLFLAAEDPEKDVSLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AI D M Y++P + T+CVG A AA+LL AGAKG R ALP+S IMI Q
Sbjct: 71 VTAGMAILDTMQYIRPDVATICVGMAASMAAVLLAAGAKGKRRALPNSEIMIHQ 124
>gi|189345948|ref|YP_001942477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
limicola DSM 245]
gi|189340095|gb|ACD89498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
limicola DSM 245]
Length = 225
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 11/136 (8%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
R+ ++ MVI TSG + D+ S L + RI++LG V L++A+ ++L+ ED
Sbjct: 25 RNTLVPMVIE-TSGRG--ERAFDIFSRLLRERIIFLGSGIDEHVAGLVMAQLIFLESEDP 81
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
E+ I++YINS G G + IYD M Y++P I T+CVG A A LL +G
Sbjct: 82 ERDIFIYINSPG--------GSVSAGLGIYDTMQYIRPDIATVCVGMAASMGAFLLASGT 133
Query: 193 KGNRAALPSSTIMIKQ 208
KG RA+LP S IMI Q
Sbjct: 134 KGKRASLPHSRIMIHQ 149
>gi|423453821|ref|ZP_17430674.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG5X1-1]
gi|401136791|gb|EJQ44375.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG5X1-1]
Length = 193
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIMIGSEITDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL AGAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSEIMIHQ 124
>gi|404496730|ref|YP_006720836.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
metallireducens GS-15]
gi|418065321|ref|ZP_12702695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens RCH3]
gi|90101408|sp|Q39UH2.1|CLPP_GEOMG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78194335|gb|ABB32102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens GS-15]
gi|373562499|gb|EHP88710.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens RCH3]
Length = 199
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T + D+ S L K+RI++LG V L++A+ L+L+ ED +K I+
Sbjct: 1 MLVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGPIDDHVANLVIAQLLFLEAEDPDKDIH 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+K P+ T+CVG A ALLL G KG R
Sbjct: 61 LYINSPG--------GVVTAGMAIYDTMQYIKAPVSTICVGQAASMGALLLSGGEKGKRF 112
Query: 198 ALPSSTIMIKQ 208
+L S IMI Q
Sbjct: 113 SLTHSRIMIHQ 123
>gi|339483339|ref|YP_004695125.1| ATP-dependent Clp protease proteolytic subunit [Nitrosomonas sp.
Is79A3]
gi|338805484|gb|AEJ01726.1| ATP-dependent Clp protease proteolytic subunit [Nitrosomonas sp.
Is79A3]
Length = 213
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 12/145 (8%)
Query: 65 DSFCKSKPRS-PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAE 123
D+ +P++ +I MVI TSG + D+ S L K R+V+L + L++A+
Sbjct: 6 DNMYDLEPKNLGLIPMVIE-TSGRG--ERAYDIYSRLLKERVVFLVGPVTETTANLVVAQ 62
Query: 124 FLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGE 183
FL+L+ E+ EK I+ YINS G G + AIYD M Y+KP + TLC+G A
Sbjct: 63 FLFLESENSEKDIHFYINSPG--------GMVSAGLAIYDTMQYIKPDVSTLCIGQAASM 114
Query: 184 AALLLGAGAKGNRAALPSSTIMIKQ 208
ALLL AGAKG R LP+S +MI Q
Sbjct: 115 GALLLTAGAKGKRYCLPNSRVMIHQ 139
>gi|218961379|ref|YP_001741154.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Candidatus Cloacamonas acidaminovorans]
gi|167730036|emb|CAO80948.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Candidatus Cloacamonas acidaminovorans str.
Evry]
Length = 194
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++G ++ ++A+ L+L+ ED E+ IY+YINS G G
Sbjct: 19 DIYSRLLKDRIVFVGGVIEDNLANTVVAQLLHLEGEDPERDIYMYINSPG--------GI 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M Y+KP + T+C+G A AA+LL AGA G R+ALP+S IMI Q
Sbjct: 71 ISAGLAIYDTMQYIKPRVSTICIGQAASMAAVLLAAGAPGKRSALPNSRIMIHQ 124
>gi|307252913|ref|ZP_07534801.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306859551|gb|EFM91576.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 190
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 13 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG--------GV 64
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + TLC G A A LL GAKG R ALP++ +MI Q
Sbjct: 65 VTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQ 118
>gi|229085578|ref|ZP_04217813.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-44]
gi|228697726|gb|EEL50476.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-44]
Length = 198
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV +G V I+A+ L+L+ ED EK I+LYINS G G
Sbjct: 24 DIYSRLLKDRIVMIGSEINDQVASSIVAQLLFLEAEDAEKDIFLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL AGAKG R ALP+S IMI Q
Sbjct: 76 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSEIMIHQ 129
>gi|422344962|ref|ZP_16425885.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
F0398]
gi|355376104|gb|EHG23365.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
F0398]
Length = 203
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A ++LL AGAK R ALP + IMI Q
Sbjct: 72 VTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKAKRYALPHARIMIHQ 125
>gi|310820094|ref|YP_003952452.1| ATP-dependent CLP protease proteolytic subunit 1 [Stigmatella
aurantiaca DW4/3-1]
gi|309393166|gb|ADO70625.1| ATP-dependent Clp protease proteolytic subunit 1 [Stigmatella
aurantiaca DW4/3-1]
Length = 207
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V+ I+++ L+L+ ED +K I LYINS G G
Sbjct: 21 DIYSRLLKDRIVMLGTEIDDDVSNAIVSQLLFLESEDPDKDINLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVK P+ T+C+G A A+LL AGAKG R +LPSS IMI Q
Sbjct: 73 VTAGLAIYDTMQYVKCPVSTICIGQAASMGAVLLLAGAKGKRYSLPSSRIMIHQ 126
>gi|46447010|ref|YP_008375.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Protochlamydia amoebophila UWE25]
gi|67460480|sp|Q6MBE9.1|CLPP2_PARUW RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|46400651|emb|CAF24100.1| probable ATP-dependent Clp protease proteolytic subunit P
[Candidatus Protochlamydia amoebophila UWE25]
Length = 207
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 77/139 (55%), Gaps = 9/139 (6%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
S PR P +++ T + D+ S L K+RI+++G V +++A+ L+L+
Sbjct: 5 SHPR-PEMSLTPYVIEDTGRGERSMDIYSRLLKDRIIFIGTEITDQVANVVVAQLLFLKM 63
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
ED +K +++YINS G GY T AIYD M Y+ I T C+G A ALLL
Sbjct: 64 EDPKKDVHIYINSLG--------GYITSGLAIYDTMQYLGCDINTYCIGQAASMGALLLT 115
Query: 190 AGAKGNRAALPSSTIMIKQ 208
AG KG R ALP+S IMI Q
Sbjct: 116 AGTKGKRFALPNSRIMIHQ 134
>gi|32035048|ref|ZP_00135114.1| COG0740: Protease subunit of ATP-dependent Clp proteases
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126208746|ref|YP_001053971.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165976699|ref|YP_001652292.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|307246197|ref|ZP_07528278.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307255177|ref|ZP_07536995.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307257345|ref|ZP_07539115.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307259615|ref|ZP_07541339.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307261756|ref|ZP_07543422.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|166201796|sp|A3N1T0.1|CLPP_ACTP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706436|sp|B0BQL3.1|CLPP_ACTPJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|126097538|gb|ABN74366.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165876800|gb|ABY69848.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|306852806|gb|EFM85030.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306862050|gb|EFM94026.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306864195|gb|EFM96108.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306866260|gb|EFM98124.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306868574|gb|EFN00385.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 196
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + TLC G A A LL GAKG R ALP++ +MI Q
Sbjct: 71 VTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQ 124
>gi|260887080|ref|ZP_05898343.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|330839143|ref|YP_004413723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|402833991|ref|ZP_10882598.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. CM52]
gi|260863142|gb|EEX77642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|329746907|gb|AEC00264.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|402279060|gb|EJU28103.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. CM52]
Length = 206
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++G +V +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 24 DIYSRLLKDRIVFVGGPIDDNVANVVVAQLLFLESEDPDKDIHLYINSPG--------GV 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y++P + T+C+G A +LLL AGAKG R ALP + IMI Q
Sbjct: 76 VTAGLAIYDTMQYIRPDVSTICIGQAASMGSLLLTAGAKGKRYALPLARIMIHQ 129
>gi|254410742|ref|ZP_05024520.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Coleofasciculus chthonoplastes PCC 7420]
gi|196182097|gb|EDX77083.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Coleofasciculus chthonoplastes PCC 7420]
Length = 202
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + LI+A+ L+L+ +D EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVDSDLANLIVAQLLFLEADDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T IYD M ++P + T+CVG A A LL AGAKG R +LP S IMI Q
Sbjct: 69 VTAGMGIYDTMNQIRPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
>gi|190150599|ref|YP_001969124.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303252091|ref|ZP_07338260.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248303|ref|ZP_07530328.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307263943|ref|ZP_07545546.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|226706435|sp|B3H252.1|CLPP_ACTP7 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189915730|gb|ACE61982.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302649073|gb|EFL79260.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306855173|gb|EFM87351.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306870705|gb|EFN02446.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 196
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + TLC G A A LL GAKG R ALP++ +MI Q
Sbjct: 71 VTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQ 124
>gi|427405940|ref|ZP_18896145.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
F0473]
gi|425708781|gb|EKU71820.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
F0473]
Length = 206
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG +V +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDNVANVVIAQMLFLESEDPDKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T A+YD M Y+KP + T+C+G A A++LL AGA G R ALP + IMI Q
Sbjct: 72 VTAGLAMYDTMQYIKPDVSTICIGQAASMASILLAAGAPGKRYALPQARIMIHQ 125
>gi|402817756|ref|ZP_10867343.1| ATP-dependent Clp protease proteolytic subunit 2 [Paenibacillus
alvei DSM 29]
gi|402504728|gb|EJW15256.1| ATP-dependent Clp protease proteolytic subunit 2 [Paenibacillus
alvei DSM 29]
Length = 192
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 74/129 (57%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ T+ + D+ S L K+RIV++G S+ I+A+ L L ED +K IY+Y
Sbjct: 5 IPYVVEQTSRGERSYDIYSRLLKDRIVFVGSEITDSLANSIVAQLLLLAAEDSDKDIYMY 64
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T F IYD M Y+KP + T+C G A ++LL AGAKG R AL
Sbjct: 65 INSPG--------GSVTAGFGIYDTMQYIKPQVHTICTGLAASYGSILLLAGAKGKRFAL 116
Query: 200 PSSTIMIKQ 208
P+S IMI Q
Sbjct: 117 PNSEIMIHQ 125
>gi|331211899|ref|XP_003307219.1| Clp protease [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
gi|309297622|gb|EFP74213.1| Clp protease [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 257
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 79/135 (58%), Gaps = 11/135 (8%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
S ++ MVI G E+ D+ S L + R++++G + LI+A+ LYL+ E +
Sbjct: 51 SGLVPMVIE-REGRGGERAF-DIFSRLLRERVIFVGGEINDADANLIVAQLLYLEAESPD 108
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
PI LYINS G G T AIYD M YV+ P+ T+C+G A ++LLGAGAK
Sbjct: 109 -PIELYINSPG--------GSVTAGLAIYDTMQYVRSPVHTICIGQACSMGSILLGAGAK 159
Query: 194 GNRAALPSSTIMIKQ 208
G R ALP+STIMI Q
Sbjct: 160 GFRKALPNSTIMIHQ 174
>gi|196043546|ref|ZP_03110784.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB108]
gi|225864765|ref|YP_002750143.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB102]
gi|196025855|gb|EDX64524.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB108]
gi|225789001|gb|ACO29218.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB102]
Length = 193
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
VIP+ T + D+ S L K+RIV +G V ++A+ L+L+ ED EK I+L
Sbjct: 3 VIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFL 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T FAI D M +KP + TLC+G A ALLL +GAKG R A
Sbjct: 63 YINSPG--------GSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFA 114
Query: 199 LPSSTIMIKQ 208
LP+S IMI Q
Sbjct: 115 LPNSEIMIHQ 124
>gi|313891581|ref|ZP_07825191.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Dialister microaerophilus UPII 345-E]
gi|313120040|gb|EFR43222.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Dialister microaerophilus UPII 345-E]
Length = 199
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 73/122 (59%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T+ + D+ S L K+RI++L + +I+A+ L+L+ ED +K I+LYINS G
Sbjct: 11 TSHGERSYDIYSRLLKDRIIFLDGQIEDHMANVIIAQLLFLEAEDPDKDIHLYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M Y++P + T+C+G+ AA+LL +GAKG R ALP S +MI
Sbjct: 69 ------GVVTAGMAIYDTMQYIRPDVSTICIGSCASMAAVLLTSGAKGKRFALPHSNVMI 122
Query: 207 KQ 208
Q
Sbjct: 123 HQ 124
>gi|295695312|ref|YP_003588550.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
gi|295410914|gb|ADG05406.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
Length = 196
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V L++A+ L+L ED +K I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTGIDDIVANLVVAQLLFLAAEDDKKDIRLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL AG KG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTMQYIKPDVSTVCIGMAASMGAFLLAAGTKGKRFALPNSEIMIHQ 124
>gi|410462600|ref|ZP_11316168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409984260|gb|EKO40581.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 202
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI+ LG + V LI A+ L+L+ ED EK I++YINS G G
Sbjct: 19 DIYSRLLRDRIILLGSAVDDYVANLICAQLLFLESEDPEKEIFMYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M YV PP+ TLC+G A ALLL AGA G R ALP S IMI Q
Sbjct: 71 VSAGLAIYDTMQYVMPPVSTLCLGQAASMGALLLCAGATGLRYALPHSRIMIHQ 124
>gi|302838584|ref|XP_002950850.1| hypothetical protein VOLCADRAFT_74777 [Volvox carteri f.
nagariensis]
gi|300263967|gb|EFJ48165.1| hypothetical protein VOLCADRAFT_74777 [Volvox carteri f.
nagariensis]
Length = 421
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Query: 101 YKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAF 159
+ RIVYLGM VP+VTEL++AE LYL+ + PI + INS+GTT+ GE L +++E
Sbjct: 59 FDQRIVYLGMPLVPAVTELMVAELLYLEKQGATLPIEMLINSSGTTRQDGEILSFDSEGV 118
Query: 160 AIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
A+ MG+VK PI T+ +G A G + ++L G KG R +LP S MI+Q
Sbjct: 119 ALTSTMGFVKNPISTVNMGLAVGWSCVVLSFGRKGWRKSLPHSLAMIQQ 167
>gi|434405726|ref|YP_007148611.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
gi|428259981|gb|AFZ25931.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
Length = 201
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG S+ LI+A+ L+L ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDNSIANLIVAQLLFLDAEDSEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P + T+C G A A LL AGAKG R +LP S IMI Q
Sbjct: 69 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
>gi|357009615|ref|ZP_09074614.1| ClpP [Paenibacillus elgii B69]
Length = 196
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + V L++A+ L+L D EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDDVANLVIAQLLFLSAVDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T IYD M ++KP + T+CVG A +LLL AGAKG R ALP+S +MI Q
Sbjct: 71 VTAGMGIYDTMQFIKPDVSTICVGMAASMGSLLLTAGAKGKRYALPNSEVMIHQ 124
>gi|237751093|ref|ZP_04581573.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter bilis
ATCC 43879]
gi|229373538|gb|EEO23929.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter bilis
ATCC 43879]
Length = 196
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 72/129 (55%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ T + D+ S L K+RI+ L SV+ I+A+ L+L+ ED +K ++LY
Sbjct: 4 IPYVIEKTGRGERSYDIYSRLLKDRIIMLSGEIDDSVSSSIVAQLLFLEAEDPQKDVFLY 63
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T F+IYD M Y+KP I T+CVG A A LL G KG R AL
Sbjct: 64 INSPG--------GSVTSGFSIYDTMNYIKPDICTICVGQAASMGAFLLSCGTKGKRYAL 115
Query: 200 PSSTIMIKQ 208
P + IMI Q
Sbjct: 116 PHARIMIHQ 124
>gi|449304294|gb|EMD00302.1| hypothetical protein BAUCODRAFT_30779 [Baudoinia compniacensis UAMH
10762]
Length = 255
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 88/176 (50%), Gaps = 26/176 (14%)
Query: 36 STSFISPFANGSVSSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPF---TSGTAWEQP 92
S + I +N S+SSD G R S+ R P + +PF T G W
Sbjct: 21 SRTHIRALSN-SISSDLYGHR------------SSERRPPSSALPLPFVTETVGGGWH-- 65
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKL 152
D+ S L K RI+ L + + I+A+ L+L+ ED KPI LYINS G
Sbjct: 66 TYDIFSRLLKERIICLNGEVEETSSASIVAQLLFLEAEDPSKPINLYINSPG-------- 117
Query: 153 GYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
G T AIYD M Y++ P+ T+C+G A +LLL GAKG+R LP S IM+ Q
Sbjct: 118 GSVTAGLAIYDTMQYIRSPVTTICMGQAASMGSLLLCGGAKGSRHCLPHSRIMVHQ 173
>gi|329121861|ref|ZP_08250476.1| ATP-dependent Clp protease, protease subunit [Dialister
micraerophilus DSM 19965]
gi|327467799|gb|EGF13291.1| ATP-dependent Clp protease, protease subunit [Dialister
micraerophilus DSM 19965]
Length = 205
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 78/137 (56%), Gaps = 9/137 (6%)
Query: 73 RSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
+ +I +P T+ + D+ S L K+RI++L + +I+A+ L+L+ ED
Sbjct: 2 KEGIIMAYVPIVVEQTSHGERSYDIYSRLLKDRIIFLDGQIEDHMANVIIAQLLFLEAED 61
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
+K I+LYINS G G T AIYD M Y++P + T+C+G+ AA+LL +G
Sbjct: 62 PDKDIHLYINSPG--------GVVTAGMAIYDTMQYIRPDVSTICIGSCASMAAVLLTSG 113
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R ALP S +MI Q
Sbjct: 114 AKGKRFALPHSNVMIHQ 130
>gi|374321531|ref|YP_005074660.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
terrae HPL-003]
gi|357200540|gb|AET58437.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
terrae HPL-003]
Length = 198
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V I+A+ L+L ED EK I+LY+NS G G
Sbjct: 19 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYVNSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AI+D M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQ 124
>gi|332798601|ref|YP_004460100.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|438001582|ref|YP_007271325.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|332696336|gb|AEE90793.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|432178376|emb|CCP25349.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 194
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+++G S +V L +A+ LYL+ ED +K I LYINS G G
Sbjct: 19 DIYSRLLKERIIFIGTSIDDTVASLAIAQMLYLESEDPDKDIRLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A+LL AG +G R ALP+S IMI Q
Sbjct: 71 VTAGLAIYDTMQYIKPDVSTICMGLAASMGAVLLAAGTEGKRYALPNSRIMIHQ 124
>gi|228997711|ref|ZP_04157318.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock3-17]
gi|228762055|gb|EEM10994.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock3-17]
Length = 194
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL AGAKG R ALP+S IMI Q
Sbjct: 72 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSEIMIHQ 125
>gi|118478148|ref|YP_895299.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
thuringiensis str. Al Hakam]
gi|118417373|gb|ABK85792.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
thuringiensis str. Al Hakam]
Length = 198
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
VIP+ T + D+ S L K+RIV +G V ++A+ L+L+ ED EK I+L
Sbjct: 8 VIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFL 67
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T FAI D M +KP + TLC+G A ALLL +GAKG R A
Sbjct: 68 YINSPG--------GSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFA 119
Query: 199 LPSSTIMIKQ 208
LP+S IMI Q
Sbjct: 120 LPNSEIMIHQ 129
>gi|357633385|ref|ZP_09131263.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. FW1012B]
gi|357581939|gb|EHJ47272.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. FW1012B]
Length = 204
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 74/134 (55%), Gaps = 11/134 (8%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P I +VI T + D+ S L ++RI+ LG + V LI A+ L+L+ ED EK
Sbjct: 2 PTIPIVI---ETTGRSERAYDIYSRLLRDRIILLGSAVDDHVANLICAQLLFLESEDPEK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I++YINS G G T AIYD M YV P + TLC+G A ALLL AGA G
Sbjct: 59 EIFMYINSPG--------GSVTAGLAIYDTMQYVLPKVSTLCMGQAASMGALLLCAGATG 110
Query: 195 NRAALPSSTIMIKQ 208
R ALP S IMI Q
Sbjct: 111 MRYALPHSRIMIHQ 124
>gi|229828304|ref|ZP_04454373.1| hypothetical protein GCWU000342_00362 [Shuttleworthia satelles DSM
14600]
gi|229792898|gb|EEP29012.1| hypothetical protein GCWU000342_00362 [Shuttleworthia satelles DSM
14600]
Length = 190
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + LI+A+ L+L+ ED K I+LYINS G G
Sbjct: 16 DIYSRLLKDRIIFLGEDVNETTASLIVAQLLFLESEDPNKDIHLYINSPG--------GV 67
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL GAKG R ALP++ IMI Q
Sbjct: 68 VTCGMAIYDTMNYIKPDVSTICIGMAASMGAFLLAGGAKGKRYALPNAEIMIHQ 121
>gi|119491296|ref|ZP_01623350.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119453460|gb|EAW34622.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 203
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI++LG + LI+A+ L+L +D EK IYLYINS G G
Sbjct: 17 DIYSRLLRDRIIFLGQQVTADLANLIVAQMLFLDADDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ IYD M +++P + T+C+G A A LL AGAKG R +LP S IMI Q
Sbjct: 69 VSAGLGIYDTMNHIRPDVSTICIGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
>gi|229009066|ref|ZP_04166405.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock1-4]
gi|228752236|gb|EEM01925.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock1-4]
Length = 194
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL AGAKG R ALP+S IMI Q
Sbjct: 72 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSEIMIHQ 125
>gi|159464779|ref|XP_001690619.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
gi|158280119|gb|EDP05878.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
Length = 415
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Query: 101 YKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAF 159
+ RIVYLGM VP+VTEL++AE LYL+ + PI + INS+GTT+ GE L +++E
Sbjct: 57 FDQRIVYLGMPLVPAVTELMVAELLYLEKQGATLPIEMLINSSGTTRQDGEILSFDSEGV 116
Query: 160 AIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
A+ MG++K PI T+ +G A G + ++L G KG R +LP S MI+Q
Sbjct: 117 ALTSTMGFIKNPISTVNMGLAVGWSCVVLSFGRKGWRKSLPHSLAMIQQ 165
>gi|452995870|emb|CCQ92258.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ultunense Esp]
Length = 197
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + L++A+ L+L ED +K IYLYINS G G
Sbjct: 18 DIYSRLLKDRIIVLGSEIDDANANLVVAQLLFLAAEDPDKDIYLYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KPP+ T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 70 ITAGMAIYDTMQFIKPPVSTICIGIAASMGAFLLAAGEKGKRYALPNSEVMIHQ 123
>gi|443323686|ref|ZP_21052690.1| protease subunit of ATP-dependent protease [Gloeocapsa sp. PCC
73106]
gi|442786668|gb|ELR96397.1| protease subunit of ATP-dependent protease [Gloeocapsa sp. PCC
73106]
Length = 200
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
DL + LY+ RI++LG S+ I++ LYL ED KPIYLYINS G G
Sbjct: 22 DLYNRLYRERIIFLGRGVNDSLANQIISVMLYLDSEDPGKPIYLYINSPG--------GS 73
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+K + T+CVG A A LLGAG G R ALP S IMI Q
Sbjct: 74 VTAGLAIYDTMQYIKSDVVTICVGLAASMGAFLLGAGTPGKRLALPHSRIMIHQ 127
>gi|337286231|ref|YP_004625704.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfatator indicus DSM 15286]
gi|335359059|gb|AEH44740.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfatator indicus DSM 15286]
Length = 202
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M +P TA + D+ S L + RIV++G + L++A+ L+L+ ED ++ I
Sbjct: 1 MYVPIVIEQTARGERAYDIYSRLLRERIVFIGAPIDDHLANLVIAQLLFLEAEDPDRDIT 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+KP I TLC+G A AA+LL G KG R
Sbjct: 61 LYINSPG--------GIVTSGLAIYDTMQYIKPDICTLCLGQAASMAAVLLAGGTKGKRY 112
Query: 198 ALPSSTIMIKQ 208
ALP S IM+ Q
Sbjct: 113 ALPHSRIMLHQ 123
>gi|60389777|sp|Q891J7.2|CLPP_CLOTE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 194
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLSDQVNDVTASLIVAQLLFLEAEDPDKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQ 124
>gi|15895898|ref|NP_349247.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum ATCC 824]
gi|337737851|ref|YP_004637298.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum DSM 1731]
gi|384459361|ref|YP_005671781.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum EA 2018]
gi|18202304|sp|P58276.1|CLPP_CLOAB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|15025667|gb|AAK80587.1|AE007761_6 Protease subunits of ATP-dependent protease, ClpP [Clostridium
acetobutylicum ATCC 824]
gi|325510050|gb|ADZ21686.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum EA 2018]
gi|336292077|gb|AEI33211.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum DSM 1731]
Length = 193
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+R+++LG + L++A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRVIFLGEEVNDTTASLVVAQLLFLESEDPDKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKP + T+C+G A + LL AGA G R ALP+S IMI Q
Sbjct: 71 ITSGMAIYDTMQYVKPDVSTICIGMAASMGSFLLTAGAPGKRFALPNSEIMIHQ 124
>gi|403381812|ref|ZP_10923869.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JC66]
Length = 193
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++G + ++ I+A+ L+LQ ED +K I++YINS G G
Sbjct: 19 DIYSRLLKDRIVFVGAAIDDALANSIVAQLLFLQAEDPDKDIHMYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ F I+D M Y+KP + T+C G A A+LLL AGAKG R ALP+S IMI Q
Sbjct: 71 TSAGFGIFDTMQYIKPQVNTICTGFAASFASLLLLAGAKGKRFALPNSEIMIHQ 124
>gi|197117660|ref|YP_002138087.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
bemidjiensis Bem]
gi|226706452|sp|B5EI27.1|CLPP_GEOBB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|197087020|gb|ACH38291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
bemidjiensis Bem]
Length = 199
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T + D+ S L K+RI++LG +V L++A+ L+L+ ED +K I+
Sbjct: 1 MLVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIH 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+K P+ T+CVG A A LL G KG R
Sbjct: 61 LYINSPG--------GVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRY 112
Query: 198 ALPSSTIMIKQ 208
+L +S IMI Q
Sbjct: 113 SLVNSRIMIHQ 123
>gi|403669499|ref|ZP_10934703.1| ATP-dependent Clp protease proteolytic subunit [Kurthia sp. JC8E]
Length = 196
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANAIVSQLLFLEAEDPEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A + LL AG KG R ALP+S IMI Q
Sbjct: 71 VTAGMAIYDTMQFIKPDVQTICIGMAASMGSFLLTAGTKGKRYALPNSEIMIHQ 124
>gi|386392769|ref|ZP_10077550.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. U5L]
gi|385733647|gb|EIG53845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. U5L]
Length = 204
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 74/134 (55%), Gaps = 11/134 (8%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P I +VI T + D+ S L ++RI+ LG + V LI A+ L+L+ ED EK
Sbjct: 2 PTIPIVI---ETTGRSERAYDIYSRLLRDRIILLGSAVDDHVANLICAQLLFLESEDPEK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I++YINS G G T AIYD M YV P + TLC+G A ALLL AGA G
Sbjct: 59 EIFMYINSPG--------GSVTAGLAIYDTMQYVLPKVSTLCMGQAASMGALLLCAGATG 110
Query: 195 NRAALPSSTIMIKQ 208
R ALP S IMI Q
Sbjct: 111 MRYALPHSRIMIHQ 124
>gi|392395333|ref|YP_006431935.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390526411|gb|AFM02142.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 202
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V LI+A+ L+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGPVTDDVANLIVAQMLFLEAEDPEKDIFLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M Y++ + T+CVG A A LL AGAKG R+ALP++ I+I Q
Sbjct: 72 ISAGMAIYDTMQYIRSDVHTICVGLAASMGAFLLTAGAKGKRSALPNAEILIHQ 125
>gi|170760538|ref|YP_001788551.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A3 str. Loch Maree]
gi|226706446|sp|B1L1D7.1|CLPP_CLOBM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|169407527|gb|ACA55938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A3 str. Loch Maree]
Length = 194
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L + LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG A A LL AGAKG R ALP+S +MI Q
Sbjct: 71 ITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLVAGAKGKRYALPNSEVMIHQ 124
>gi|78188367|ref|YP_378705.1| peptidase S14, ClpP [Chlorobium chlorochromatii CaD3]
gi|90101406|sp|Q3ATL3.1|CLPP_CHLCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78170566|gb|ABB27662.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
chlorochromatii CaD3]
Length = 225
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 76/133 (57%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ MVI TSG + D+ S L + RI++LG V LI+A+ ++L+ ED E+
Sbjct: 28 LVPMVIE-TSGRG--ERAFDIFSRLLRERIIFLGTGIDEHVAGLIMAQLIFLESEDPERD 84
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IY+YINS G G + IYD M Y++P I T+CVG A A LL +G KG
Sbjct: 85 IYIYINSPG--------GSVSAGLGIYDTMQYIRPEISTVCVGMAASMGAFLLASGNKGK 136
Query: 196 RAALPSSTIMIKQ 208
RA+LP S IMI Q
Sbjct: 137 RASLPHSRIMIHQ 149
>gi|78043074|ref|YP_359188.1| ATP-dependent Clp protease proteolytic subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|90101405|sp|Q3AF96.1|CLPP_CARHZ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77995189|gb|ABB14088.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Carboxydothermus hydrogenoformans Z-2901]
Length = 195
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+R +++G V L++A+ L+L+ ED EK I+LYINS G G
Sbjct: 20 DIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL AGAKG R +LP + IMI Q
Sbjct: 72 ITAGMAIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIMIHQ 125
>gi|322418659|ref|YP_004197882.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
gi|320125046|gb|ADW12606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
Length = 199
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 74/131 (56%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T + D+ S L K+RI++LG +V L++A+ L+L+ ED +K I+
Sbjct: 1 MLVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIH 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+K P+ T+C+G A A LL G KG R
Sbjct: 61 LYINSPG--------GVVTAGMAIYDTMRYIKAPVSTICIGQAASMGAFLLSGGEKGKRF 112
Query: 198 ALPSSTIMIKQ 208
+L +S IMI Q
Sbjct: 113 SLANSRIMIHQ 123
>gi|154148860|ref|YP_001405639.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
hominis ATCC BAA-381]
gi|166201810|sp|A7HZE8.1|CLPP_CAMHC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|153804869|gb|ABS51876.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
hominis ATCC BAA-381]
Length = 195
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M +P+ T+ + D+ S L K+RIV L V ++A+ L+L+ ED +K IY
Sbjct: 1 MFVPYVIERTSRGERSYDIYSRLLKDRIVMLSGEINDEVASSVVAQLLFLEAEDPDKDIY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T F+IYD M Y+KP + T+C+G A A LL G KG R
Sbjct: 61 LYINSPG--------GVVTSGFSIYDTMNYIKPAVSTICIGQAASMGAFLLSCGEKGKRY 112
Query: 198 ALPSSTIMIKQ 208
ALP++ IMI Q
Sbjct: 113 ALPNARIMIHQ 123
>gi|423402513|ref|ZP_17379686.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG2X1-2]
gi|423459171|ref|ZP_17435968.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG5X2-1]
gi|423476791|ref|ZP_17453506.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG6X1-1]
gi|401144249|gb|EJQ51779.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG5X2-1]
gi|401650785|gb|EJS68354.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG2X1-2]
gi|402433098|gb|EJV65153.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG6X1-1]
Length = 193
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ T + D+ S L K+RI+ +G V ++A+ L+L+ ED EK IYLY
Sbjct: 4 IPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLY 63
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T FAI D M +KP + TLC+G A ALLL +GAKG R AL
Sbjct: 64 INSPG--------GSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFAL 115
Query: 200 PSSTIMIKQ 208
P+S IMI Q
Sbjct: 116 PNSEIMIHQ 124
>gi|226489629|emb|CAX74965.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Schistosoma japonicum]
Length = 253
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L S V L++A+ LYLQ ED + PI++YINS G G
Sbjct: 64 DIYSRLLKDRIICLMGSISDEVAGLVVAQLLYLQSEDKKIPIHIYINSPG--------GV 115
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KPP+ T CVG A +LLL AGA G R ALP S IM+ Q
Sbjct: 116 VTAGLAIYDTMQFIKPPVATWCVGQASSMGSLLLAAGAPGLRFALPHSRIMVHQ 169
>gi|425066829|ref|ZP_18469949.1| ATP-dependentlp protease proteolytic subunit [Pasteurella multocida
subsp. gallicida P1059]
gi|404380615|gb|EJZ77105.1| ATP-dependentlp protease proteolytic subunit [Pasteurella multocida
subsp. gallicida P1059]
Length = 188
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 68/122 (55%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K R+++LG + LI+A+ L+L+ ED EK I +YINS G
Sbjct: 6 TARGERSYDIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKDINIYINSPG-- 63
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M +VKP I TLCVG A A LL G G R ALPS+ +MI
Sbjct: 64 ------GSVTAGMAIYDTMQFVKPDIRTLCVGQACSMGAFLLAGGTAGKRIALPSARVMI 117
Query: 207 KQ 208
Q
Sbjct: 118 HQ 119
>gi|409990366|ref|ZP_11273750.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
gi|291567407|dbj|BAI89679.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
gi|409938772|gb|EKN80052.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
Length = 200
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV+LG V LI+A+ L+L ED EK IYLYINS G GG G
Sbjct: 17 DIYSRLLRDRIVFLGTQVNSDVANLIVAQLLFLDAEDPEKDIYLYINSPG---GGVNAG- 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I+D M +++P + T+C+G A A LL AGAKG R +LP S IMI Q
Sbjct: 73 ----LGIFDTMNHIRPDVCTVCLGLAASMGAFLLSAGAKGKRYSLPHSRIMIHQ 122
>gi|251798425|ref|YP_003013156.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
gi|247546051|gb|ACT03070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
Length = 195
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + V ++A+ L+L +D EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDDVANSVIAQLLFLAADDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A +LLL AGAKG R ALP++ +MI Q
Sbjct: 71 VTAGMAIYDTMQYIKPDVSTICMGMAASMGSLLLTAGAKGKRFALPNAEVMIHQ 124
>gi|423559568|ref|ZP_17535870.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
MC67]
gi|401188072|gb|EJQ95141.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
MC67]
Length = 193
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL AGAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSEIMIHQ 124
>gi|315644534|ref|ZP_07897666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
vortex V453]
gi|315280041|gb|EFU43338.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
vortex V453]
Length = 198
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V I+A+ L+L ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AI+D M ++KP + T+CVG A A LL AGAKG R LP+S IMI Q
Sbjct: 71 ITAGMAIFDTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYGLPNSEIMIHQ 124
>gi|28211967|ref|NP_782911.1| ATP-dependent Clp protease proteolytic subunit [Clostridium tetani
E88]
gi|28204410|gb|AAO36848.1| ATP-dependent clp protease proteolytic subunit [Clostridium tetani
E88]
Length = 202
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 27 DIYSRLLKDRIIMLSDQVNDVTASLIVAQLLFLEAEDPDKDIFLYINSPG--------GS 78
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 79 ITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQ 132
>gi|209523050|ref|ZP_03271607.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|376001697|ref|ZP_09779556.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|209496637|gb|EDZ96935.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|375329926|emb|CCE15309.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
Length = 200
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV+LG V LI+A+ L+L ED EK IYLYINS G GG G
Sbjct: 17 DIYSRLLRDRIVFLGTQVNSDVANLIVAQLLFLDAEDPEKDIYLYINSPG---GGVNAG- 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I+D M +++P + T+C+G A A LL AGAKG R +LP S IMI Q
Sbjct: 73 ----LGIFDTMNHIRPDVCTVCLGLAASMGAFLLSAGAKGKRYSLPHSRIMIHQ 122
>gi|334339586|ref|YP_004544566.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfotomaculum ruminis DSM 2154]
gi|334090940|gb|AEG59280.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum ruminis DSM 2154]
Length = 195
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + L++A+FL+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFIGGPIEDHIANLVIAQFLFLEAEDPEKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+K P+ T+C+G A + LL AG KG R +LP + IMI Q
Sbjct: 72 VTAGMAIYDTMQYIKCPVSTICLGQAASMGSFLLAAGTKGKRYSLPYARIMIHQ 125
>gi|253701609|ref|YP_003022798.1| ATP-dependent Clp protease proteolytic subunit [Geobacter sp. M21]
gi|259585955|sp|C6E2T0.1|CLPP_GEOSM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|251776459|gb|ACT19040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M21]
Length = 199
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T + D+ S L K+RI++LG +V L++A+ L+L+ ED +K I+
Sbjct: 1 MLVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIH 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+K P+ T+CVG A A LL G KG R
Sbjct: 61 LYINSPG--------GVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRY 112
Query: 198 ALPSSTIMIKQ 208
+L +S IMI Q
Sbjct: 113 SLVNSRIMIHQ 123
>gi|359437263|ref|ZP_09227333.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20311]
gi|359446707|ref|ZP_09236358.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20439]
gi|358028087|dbj|GAA63582.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20311]
gi|358039513|dbj|GAA72607.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20439]
Length = 205
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 11/139 (7%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P + ++ MV+ TA + D+ S L K RI++L ++ LILA+ L+L+
Sbjct: 6 TDPLNALVPMVV---EQTAKGERSFDIYSRLLKERIIFLTGQVEDNMANLILAQMLFLES 62
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ +K I+LYINS G G T AIYD M ++KP + T+CVG A A LL
Sbjct: 63 ENPDKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMGAFLLS 114
Query: 190 AGAKGNRAALPSSTIMIKQ 208
GAKG R LP+S +MI Q
Sbjct: 115 GGAKGKRFCLPNSRVMIHQ 133
>gi|224094113|ref|XP_002310077.1| predicted protein [Populus trichocarpa]
gi|222852980|gb|EEE90527.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV + + +++A+ L+L+ E+ KPI++Y+NS G G
Sbjct: 51 DIFSRLLKERIVCINGPIDDDTSHVVVAQLLFLESENPSKPIHMYLNSPG--------GQ 102
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y++ P+ T+C+G A A+LLL AGAKG R ALP++TIMI Q
Sbjct: 103 VTAGLAIYDTMQYIRSPVTTICLGQAASMASLLLAAGAKGERKALPNATIMIHQ 156
>gi|423062476|ref|ZP_17051266.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
gi|406716384|gb|EKD11535.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
Length = 200
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV+LG V LI+A+ L+L ED EK IYLYINS G GG G
Sbjct: 17 DIYSRLLRDRIVFLGTQVNSDVANLIVAQLLFLDAEDPEKDIYLYINSPG---GGVNAG- 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
I+D M +++P + T+C+G A A LL AGAKG R +LP S IMI Q
Sbjct: 73 ----LGIFDTMNHIRPDVCTVCLGLAASMGAFLLSAGAKGKRYSLPHSRIMIHQ 122
>gi|423655583|ref|ZP_17630882.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD200]
gi|401292851|gb|EJR98505.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD200]
Length = 193
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|423523346|ref|ZP_17499819.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuA4-10]
gi|401171588|gb|EJQ78814.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuA4-10]
Length = 193
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL AGAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSEIMIHQ 124
>gi|325983082|ref|YP_004295484.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrosomonas
sp. AL212]
gi|325532601|gb|ADZ27322.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrosomonas
sp. AL212]
Length = 213
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 83/145 (57%), Gaps = 12/145 (8%)
Query: 65 DSFCKSKPRS-PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAE 123
D+ +P++ +I MVI TSG + D+ S L K R+V+L + L++A+
Sbjct: 6 DNIRDMEPKNLGLIPMVIE-TSGRG--ERAYDIYSRLLKERVVFLVGPVTEASANLVVAQ 62
Query: 124 FLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGE 183
FL+L+ E+ EK I+ YINS G G + A+YD M Y+KP + TLC+G A
Sbjct: 63 FLFLESENSEKDIFFYINSPG--------GMVSAGLAVYDTMQYIKPDVSTLCIGQAASM 114
Query: 184 AALLLGAGAKGNRAALPSSTIMIKQ 208
ALLL AGAKG R LP+S +MI Q
Sbjct: 115 GALLLTAGAKGKRYCLPNSRVMIHQ 139
>gi|423469062|ref|ZP_17445806.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG6O-2]
gi|402440413|gb|EJV72406.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG6O-2]
Length = 193
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL AGAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSEIMIHQ 124
>gi|392554152|ref|ZP_10301289.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
undina NCIMB 2128]
Length = 201
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 11/139 (7%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P + ++ MV+ TA + D+ S L K RI++L ++ LILA+ L+L+
Sbjct: 2 TDPLNALVPMVV---EQTAKGERSFDIYSRLLKERIIFLTGQVEDNMANLILAQMLFLES 58
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ +K I+LYINS G G T AIYD M ++KP + T+CVG A A LL
Sbjct: 59 ENPDKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMGAFLLS 110
Query: 190 AGAKGNRAALPSSTIMIKQ 208
GAKG R LP+S +MI Q
Sbjct: 111 GGAKGKRFCLPNSRVMIHQ 129
>gi|251772219|gb|EES52789.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Leptospirillum ferrodiazotrophum]
Length = 201
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M+IP T + D+ S L ++RI+ LG +V L++A+ L+L+ ED K I
Sbjct: 1 MLIPMVVEQTNRGERAYDIYSRLLRDRIIILGTPIDDTVANLVIAQMLFLESEDSSKDIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD + ++KP + T+C+G A A LL AGAKG R
Sbjct: 61 LYINSPG--------GIVTAGLAIYDTIKFIKPDVSTICIGQAASMGAFLLSAGAKGKRY 112
Query: 198 ALPSSTIMIKQ 208
ALP++ IMI Q
Sbjct: 113 ALPNARIMIHQ 123
>gi|116073334|ref|ZP_01470596.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
gi|116068639|gb|EAU74391.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
Length = 200
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ + L RI++LG +V ++A+ LYL ED KPIYLYINS G G
Sbjct: 22 DIYTRLGVERILFLGSEVNDAVANSLVAQMLYLDSEDSSKPIYLYINSPG--------GS 73
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVK + T+CVG A A LLGAG KG R ALP S IMI Q
Sbjct: 74 VTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLGAGTKGKRLALPHSRIMIHQ 127
>gi|443479146|ref|ZP_21068788.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
gi|443015411|gb|ELS30378.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
Length = 198
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG S++ +I+A+ L+L+ +D EK I+LYINS G G
Sbjct: 17 DIFSRLLRERIVFLGQQVDDSISNIIVAQLLFLEADDPEKDIFLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M +++P + T+CVG A A LL GAKG R +LP + IMI Q
Sbjct: 69 VTAGMAIYDTMQHIRPDVSTICVGLAASMGAFLLTGGAKGKRLSLPHTRIMIHQ 122
>gi|345858360|ref|ZP_08810754.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus sp. OT]
gi|344328554|gb|EGW39938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus sp. OT]
Length = 205
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + V+ L++A+ L+L+ ED EK I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGAIDDDVSNLVVAQMLFLEAEDPEKDINLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y++ + T+C+G A A LL AGAKG R ALP+S ++I Q
Sbjct: 72 ITAGMAIYDTMQYIRSDVRTICIGMAASMGAFLLTAGAKGKRVALPNSEVLIHQ 125
>gi|229060463|ref|ZP_04197826.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH603]
gi|228718846|gb|EEL70467.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH603]
Length = 198
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 24 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL AGAKG R ALP+S IMI Q
Sbjct: 76 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSEIMIHQ 129
>gi|261404070|ref|YP_003240311.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|329927993|ref|ZP_08281997.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
gi|261280533|gb|ACX62504.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|328938097|gb|EGG34494.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
Length = 198
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V I+A+ L+L ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AI+D M ++KP + T+CVG A A LL AGAKG R LP+S IMI Q
Sbjct: 71 ITAGMAIFDTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYGLPNSEIMIHQ 124
>gi|434387492|ref|YP_007098103.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chamaesiphon
minutus PCC 6605]
gi|428018482|gb|AFY94576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chamaesiphon
minutus PCC 6605]
Length = 203
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV+LG + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRDRIVFLGGQVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ I+D M ++P + T+C+G A A LL AGAKG R +LPSS IMI Q
Sbjct: 69 VSAGMGIFDTMNQIRPDVSTVCMGFAASMGAFLLSAGAKGKRTSLPSSRIMIHQ 122
>gi|399924495|ref|ZP_10781853.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
rhinitidis 1-13]
Length = 194
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++ ++ +LI+A+ L+L+ ED K I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFASGEVNDAMADLIVAQLLFLESEDPNKDIQLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ FAIYD M Y+KP + T+C+G A A LL +GAKG R ALP+S IMI Q
Sbjct: 71 VSAGFAIYDTMNYIKPDVSTICIGMAASMGAFLLASGAKGKRFALPNSDIMIHQ 124
>gi|373455365|ref|ZP_09547201.1| ATP-dependent Clp protease proteolytic subunit [Dialister
succinatiphilus YIT 11850]
gi|371935005|gb|EHO62778.1| ATP-dependent Clp protease proteolytic subunit [Dialister
succinatiphilus YIT 11850]
Length = 201
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K+RI++L + +I+A+ L+L+ ED K I+LYINS G
Sbjct: 11 TAQGERSYDIYSRLLKDRIIFLDGQIEDHMANVIIAQLLFLEAEDPSKDIHLYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M Y++P + T+C+G+ AA+LL AGA G R ALP S IMI
Sbjct: 69 ------GVVTAGLAIYDTMQYIRPDVSTICIGSCASMAAVLLTAGAAGKRYALPHSNIMI 122
Query: 207 KQ 208
Q
Sbjct: 123 HQ 124
>gi|30020914|ref|NP_832545.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 14579]
gi|218233818|ref|YP_002367506.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus B4264]
gi|296503329|ref|YP_003665029.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis BMB171]
gi|423586787|ref|ZP_17562874.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD045]
gi|423648679|ref|ZP_17624249.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD169]
gi|67460526|sp|Q81CH1.1|CLPP1_BACCR RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|29896467|gb|AAP09746.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 14579]
gi|218161775|gb|ACK61767.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus B4264]
gi|296324381|gb|ADH07309.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis BMB171]
gi|401230305|gb|EJR36813.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD045]
gi|401284177|gb|EJR90043.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD169]
Length = 193
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|227824397|ref|ZP_03989229.1| ATP-dependent Clp protease [Acidaminococcus sp. D21]
gi|352683492|ref|YP_004895475.1| ATP-dependent Clp protease [Acidaminococcus intestini RyC-MR95]
gi|226904896|gb|EEH90814.1| ATP-dependent Clp protease [Acidaminococcus sp. D21]
gi|350278145|gb|AEQ21335.1| ATP-dependent Clp protease [Acidaminococcus intestini RyC-MR95]
Length = 199
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++ + LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 22 DIYSRLLKDRIIFVTGEIEDHMANLIVAQLLFLESEDPDKDIHLYINSPG--------GS 73
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M Y++P + T+CVG A A++LL AGAKG R ALP S +MI Q
Sbjct: 74 VSAGLAIYDTMQYIRPDVSTICVGMAASMASILLAAGAKGKRFALPHSRVMIHQ 127
>gi|218897812|ref|YP_002446223.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9842]
gi|218542547|gb|ACK94941.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9842]
Length = 193
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|428319265|ref|YP_007117147.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
gi|428242945|gb|AFZ08731.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
Length = 202
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV+LG + LI+A+ L+L ED EK IYLY+NS G G
Sbjct: 17 DIYSRLLRDRIVFLGQQVDSDLANLIVAQLLFLDAEDPEKDIYLYLNSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P + T+C+G A A LL AGAKG R +LP S IMI Q
Sbjct: 69 VTAGMGIFDTMNHIRPDVCTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
>gi|423077037|ref|ZP_17065745.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Desulfitobacterium hafniense DP7]
gi|361851989|gb|EHL04277.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Desulfitobacterium hafniense DP7]
Length = 196
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V L++A+ L+L+ ED EK I+LYINS G G
Sbjct: 14 DIYSRLLKDRIIFLGGPVTDDVANLVVAQMLFLEAEDPEKDIFLYINSPG--------GS 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M Y++ + T+CVG A A LL AGAKG R ALP++ I+I Q
Sbjct: 66 ISAGMAIYDTMQYIRADVHTICVGLAASMGAFLLTAGAKGKRQALPNAEILIHQ 119
>gi|156541196|ref|XP_001599209.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Nasonia vitripennis]
Length = 234
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L ++ L++A+ L+LQ E +KPI+LYINS G G
Sbjct: 41 DIYSRLLKERIICLMGPITDDISSLVVAQLLFLQSESSKKPIHLYINSPG--------GV 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T IYD M YV PP+ T CVG A A+LLL AGA G R ALP++ IMI Q
Sbjct: 93 VTAGLGIYDTMQYVLPPVATWCVGQACSMASLLLAAGAPGMRHALPNARIMIHQ 146
>gi|423390965|ref|ZP_17368191.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG1X1-3]
gi|401636798|gb|EJS54551.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG1X1-3]
Length = 193
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL AGAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSEIMIHQ 124
>gi|229110239|ref|ZP_04239813.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-15]
gi|229128131|ref|ZP_04257113.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-Cer4]
gi|228655406|gb|EEL11262.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-Cer4]
gi|228673225|gb|EEL28495.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-15]
Length = 198
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK IYLYINS G G
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 76 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 129
>gi|229145364|ref|ZP_04273753.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST24]
gi|228638203|gb|EEK94644.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST24]
Length = 198
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK IYLYINS G G
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 76 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 129
>gi|228908533|ref|ZP_04072373.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 200]
gi|228965727|ref|ZP_04126807.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|229097304|ref|ZP_04228266.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-29]
gi|229103392|ref|ZP_04234074.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-28]
gi|229116300|ref|ZP_04245690.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-3]
gi|402559889|ref|YP_006602613.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
thuringiensis HD-771]
gi|407705214|ref|YP_006828799.1| shikimate kinase [Bacillus thuringiensis MC28]
gi|423360226|ref|ZP_17337729.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD022]
gi|423379405|ref|ZP_17356689.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG1O-2]
gi|423442452|ref|ZP_17419358.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG4X2-1]
gi|423447331|ref|ZP_17424210.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG5O-1]
gi|423465520|ref|ZP_17442288.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG6O-1]
gi|423534865|ref|ZP_17511283.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuB2-9]
gi|423539868|ref|ZP_17516259.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuB4-10]
gi|423546093|ref|ZP_17522451.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuB5-5]
gi|423562806|ref|ZP_17539082.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
MSX-A1]
gi|423616903|ref|ZP_17592737.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD115]
gi|423624105|ref|ZP_17599883.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD148]
gi|434375764|ref|YP_006610408.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
thuringiensis HD-789]
gi|228667132|gb|EEL22584.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-3]
gi|228679888|gb|EEL34083.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-28]
gi|228686115|gb|EEL40031.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-29]
gi|228793986|gb|EEM41509.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228851086|gb|EEM95900.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 200]
gi|401082316|gb|EJP90586.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD022]
gi|401131327|gb|EJQ38981.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG5O-1]
gi|401173403|gb|EJQ80615.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuB4-10]
gi|401181906|gb|EJQ89053.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuB5-5]
gi|401199780|gb|EJR06675.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
MSX-A1]
gi|401256927|gb|EJR63132.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD115]
gi|401257417|gb|EJR63616.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD148]
gi|401633053|gb|EJS50835.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG1O-2]
gi|401788541|gb|AFQ14580.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
thuringiensis HD-771]
gi|401874321|gb|AFQ26488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
thuringiensis HD-789]
gi|402414304|gb|EJV46637.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG4X2-1]
gi|402417335|gb|EJV49637.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG6O-1]
gi|402462596|gb|EJV94301.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuB2-9]
gi|407382899|gb|AFU13400.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis MC28]
Length = 193
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|428211847|ref|YP_007084991.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
gi|428000228|gb|AFY81071.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
Length = 234
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
DL S L + RIV+LG +V +LI+A+ L+L ED EK I LYINS G G
Sbjct: 47 DLYSRLLRERIVFLGTPVDDNVADLIVAQMLFLDAEDPEKDIQLYINSPG--------GS 98
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++P + T+C G A A LL AGAKG R +LPSS IMI Q
Sbjct: 99 VTAGMAIYDTMQQIRPDVATICYGLAASMGAFLLTAGAKGKRMSLPSSRIMIHQ 152
>gi|389578265|ref|ZP_10168292.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacter
postgatei 2ac9]
gi|389399900|gb|EIM62122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacter
postgatei 2ac9]
Length = 208
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 77/134 (57%), Gaps = 11/134 (8%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P+I MV+ ++ + D+ S L K+RI++LG + V LI+A+ L+L+ ED +K
Sbjct: 2 PLIPMVVEQSN---RGERAYDIYSRLLKDRIIFLGSAIDDEVANLIVAQMLFLESEDPDK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I YINS G G T AIYD + Y+KP + T+C+G A ALLL AG G
Sbjct: 59 DINFYINSPG--------GVVTAGMAIYDTIQYIKPDVATVCIGQAASMGALLLTAGTAG 110
Query: 195 NRAALPSSTIMIKQ 208
R ALP++ IMI Q
Sbjct: 111 KRFALPNARIMIHQ 124
>gi|397691263|ref|YP_006528517.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Melioribacter
roseus P3M]
gi|395812755|gb|AFN75504.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Melioribacter
roseus P3M]
Length = 222
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 9/141 (6%)
Query: 69 KSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYL 127
+S + + ++P+ T + D+ S L + RIV+LG + + LI+A+ L+L
Sbjct: 10 ESIKKHEIFNQLVPYVIEQTGRGERGMDIFSRLLRERIVFLGTAIDDHIASLIIAQLLFL 69
Query: 128 QYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALL 187
+ ED +K IYLYINS G G + AIYD M Y++ + T+CVG A A+L
Sbjct: 70 EAEDPDKDIYLYINSPG--------GSVSAGLAIYDTMKYIRSKVSTICVGLAASMGAVL 121
Query: 188 LGAGAKGNRAALPSSTIMIKQ 208
L G G R+ALP S IMI Q
Sbjct: 122 LAGGEAGKRSALPHSKIMIHQ 142
>gi|294101895|ref|YP_003553753.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aminobacterium colombiense DSM 12261]
gi|293616875|gb|ADE57029.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aminobacterium colombiense DSM 12261]
Length = 193
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + ++A+ L+L+ ED +K I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGQEIDDPIANTVVAQLLFLESEDPDKDIHLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M Y+K P+ T+C+G A AA+LL GA G R ALP++ +MI Q
Sbjct: 70 ISSGLAIYDTMQYIKSPVSTICIGQAASMAAVLLAGGAPGKRIALPNARVMIHQ 123
>gi|86610014|ref|YP_478776.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|115311349|sp|Q2JIP1.1|CLPP2_SYNJB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86558556|gb|ABD03513.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 200
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI++LG + LI+A+ LYL+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
AIYD M +++P + T+C+G A A LL G KG R ALP + IMI Q
Sbjct: 69 VYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQ 122
>gi|428222892|ref|YP_007107062.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
gi|427996232|gb|AFY74927.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
Length = 214
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG SV +++++ L+L+ ED +K IY+YINS G G
Sbjct: 38 DIFSRLLRERIIFLGTEVNDSVASVMMSQLLFLEAEDPQKDIYVYINSPG--------GS 89
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M +V+P + T+C+G A A LL AGAKG R +LP+S IMI Q
Sbjct: 90 VTSGMAIYDTMQHVRPDVSTICMGLAASMGAFLLSAGAKGKRLSLPNSRIMIHQ 143
>gi|392427640|ref|YP_006468634.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus acidiphilus SJ4]
gi|391357603|gb|AFM43302.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus acidiphilus SJ4]
Length = 207
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V L++A+ L+L+ ED EK I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGGIDDDVANLVVAQMLFLEAEDPEKDINLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y++ + T+C+G A A LL AGAKG R ALP+S ++I Q
Sbjct: 72 ITAGMAIYDTMQYIRSDVRTICIGMAASMGAFLLAAGAKGKRVALPNSEVLIHQ 125
>gi|347753754|ref|YP_004861318.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Chloracidobacterium thermophilum B]
gi|347586272|gb|AEP10802.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Chloracidobacterium thermophilum B]
Length = 199
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 76/138 (55%), Gaps = 11/138 (7%)
Query: 71 KPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYE 130
P + ++ MVI TS + D+ S L K+ I+++G +V L++A+ L+L+ E
Sbjct: 3 HPTAALVPMVIEQTS---RGERAYDIYSRLLKDNIIFIGTPIDDTVASLVVAQLLFLESE 59
Query: 131 DVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGA 190
D E+ I +YINS G G T AIYD M +VKP I T C+G ALLL A
Sbjct: 60 DPERDISIYINSPG--------GSVTAGMAIYDTMQFVKPDIVTFCIGQCASMGALLLAA 111
Query: 191 GAKGNRAALPSSTIMIKQ 208
G KG R ALP S I+I Q
Sbjct: 112 GTKGKRYALPHSRILIHQ 129
>gi|255528525|ref|ZP_05395307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
carboxidivorans P7]
gi|296184877|ref|ZP_06853288.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
carboxidivorans P7]
gi|255507783|gb|EET84241.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
carboxidivorans P7]
gi|296050659|gb|EFG90082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
carboxidivorans P7]
Length = 194
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+R+V L L++A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRVVMLTEEVNDVTASLVVAQLLFLEAEDPDKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL AGAKG R ALP++ IMI Q
Sbjct: 71 ITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLNAGAKGKRVALPNAEIMIHQ 124
>gi|229018102|ref|ZP_04174977.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1273]
gi|229024283|ref|ZP_04180742.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1272]
gi|228737058|gb|EEL87594.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1272]
gi|228743193|gb|EEL93318.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1273]
Length = 198
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 24 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL AGAKG R ALP+S IMI Q
Sbjct: 76 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSEIMIHQ 129
>gi|224081363|ref|XP_002306383.1| predicted protein [Populus trichocarpa]
gi|118481948|gb|ABK92906.1| unknown [Populus trichocarpa]
gi|222855832|gb|EEE93379.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV + + +++A+ L+L+ E+ KPI++Y+NS G G+
Sbjct: 51 DIFSRLLKERIVCINGPINDDTSNVVVAQLLFLESENPSKPIHMYLNSPG--------GH 102
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y++ P+ T+C+G A A+LLL +GAKG R ALP++TIMI Q
Sbjct: 103 VTAGLAIYDTMQYIRSPVNTICLGQAASMASLLLASGAKGERKALPNATIMIHQ 156
>gi|402557004|ref|YP_006598275.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus FRI-35]
gi|401798214|gb|AFQ12073.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus FRI-35]
Length = 193
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL AGAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGLAASFGALLLLAGAKGKRFALPNSEIMIHQ 124
>gi|428222327|ref|YP_007106497.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
gi|427995667|gb|AFY74362.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
Length = 198
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + +V+ L++A+ L+L+ ED EK I++YINS G G
Sbjct: 17 DIFSRLLRERIVFLGTAIDDNVSNLVVAQLLFLEAEDPEKDIFIYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M +++P + T+CVG A A LL G KG R +LP + IMI Q
Sbjct: 69 VTAGMAIYDTMQHIRPDVSTICVGLAASMGAFLLAGGTKGKRLSLPHTRIMIHQ 122
>gi|373495484|ref|ZP_09586069.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium
infirmum F0142]
gi|371964962|gb|EHO82466.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium
infirmum F0142]
Length = 192
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 82/153 (53%), Gaps = 12/153 (7%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
+IP+ T+ + D+ S + K+RI++LG V L++A+ L+L ED EK I L
Sbjct: 3 MIPYVIEQTSRGERSYDIYSRMLKDRIIFLGDEIDDHVANLVVAQLLFLDAEDSEKDINL 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T AI D M Y+K + T+CVG A A+LL +GAKG R A
Sbjct: 63 YINSPG--------GSVTAGLAILDTMNYIKADVSTICVGLAASMGAVLLSSGAKGKRFA 114
Query: 199 LPSSTIMIKQ--AGDTG-ICLLKSSLTWLNSVK 228
LP++ IMI Q G G ++ W+N K
Sbjct: 115 LPNAEIMIHQPLGGAKGQASDIRIHADWINKTK 147
>gi|366162940|ref|ZP_09462695.1| ATP-dependent Clp protease proteolytic subunit [Acetivibrio
cellulolyticus CD2]
Length = 194
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L L++A+ L+L+ ED +K I LYINS G G
Sbjct: 19 DIFSRLLKDRIILLSDEVNDVTASLVVAQMLFLEAEDPDKDIQLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ FAIYD M YVKP + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 VSAGFAIYDTMQYVKPDVSTICIGMAASMGAFLLNAGAKGKRFALPNSEIMIHQ 124
>gi|223040072|ref|ZP_03610353.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
rectus RM3267]
gi|222878658|gb|EEF13758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
rectus RM3267]
Length = 196
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ T+ + D+ S L K+RI+ L + I+A+ L+L+ ED +K IYLY
Sbjct: 5 IPYVIERTSKGERSYDIYSRLLKDRIIMLSGEIEDGIASAIVAQMLFLEAEDPDKDIYLY 64
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T F+IYD M Y+KP + T+C+G A A LL GA+G R AL
Sbjct: 65 INSPG--------GVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAQGKRYAL 116
Query: 200 PSSTIMIKQ 208
P+S IMI Q
Sbjct: 117 PNSRIMIHQ 125
>gi|125591043|gb|EAZ31393.1| hypothetical protein OsJ_15521 [Oryza sativa Japonica Group]
Length = 221
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 74/130 (56%), Gaps = 11/130 (8%)
Query: 79 MVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
MVI TS + D+ S L K RIV + L++A+ L+L+ E+ KP++L
Sbjct: 1 MVIEHTS---RGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHL 57
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T AIYD M Y++ P+ TLC+G A A+LLL AGA+G R A
Sbjct: 58 YINSPG--------GVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRA 109
Query: 199 LPSSTIMIKQ 208
LP++ +MI Q
Sbjct: 110 LPNARVMIHQ 119
>gi|410726144|ref|ZP_11364388.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. Maddingley MBC34-26]
gi|410601390|gb|EKQ55905.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. Maddingley MBC34-26]
Length = 198
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 9/130 (6%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
+IP+ T+ + D+ S L K+RI++LG S+ LI+A+ ++L+ ED +K I+L
Sbjct: 3 LIPYVIEQTSRGERSYDIYSKLLKDRIIFLGEEVSDSIANLIVAQLIFLEAEDPDKDIHL 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T FAIYD M Y+K + T+CVG A A LL GA G R A
Sbjct: 63 YINSPG--------GSVTAGFAIYDTMNYIKCDVSTICVGMAASMGAFLLAGGANGKRFA 114
Query: 199 LPSSTIMIKQ 208
L ++ +MI Q
Sbjct: 115 LSNAEVMIHQ 124
>gi|403222933|dbj|BAM41064.1| ATP-dependent Clp protease proteolytic subunit [Theileria
orientalis strain Shintoku]
Length = 764
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 76/141 (53%), Gaps = 10/141 (7%)
Query: 84 TSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINST 143
+ A++ PPDL S L RIVY+G +V L++++ LYL Y+ EKPI +YINS
Sbjct: 2 NNDIAYKSRPPDLPSLLLSERIVYIGYPIQQTVAHLVISQLLYLDYDSQEKPIKIYINSD 61
Query: 144 GTTKGGEKLGY-ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSS 202
E L E +A I DV+ Y+K + T+ +G A+G AA++L +G G R LP S
Sbjct: 62 NEHTKEEGLSTSEIDALNIVDVINYLKNDVITINLGKAYGPAAIILASGTPGKRYVLPRS 121
Query: 203 ---------TIMIKQAGDTGI 214
TI +QA D I
Sbjct: 122 YTLLRQSPATISFRQAEDIAI 142
>gi|402814642|ref|ZP_10864236.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
gi|402508489|gb|EJW19010.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
Length = 193
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V I+A+ L+L +D EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTEVNDLVANSIIAQLLFLAADDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M ++KP + T+CVG A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ISAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQ 124
>gi|333977877|ref|YP_004515822.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333821358|gb|AEG14021.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 197
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G V L++A+ L+L+ ED EK I+ YINS G G
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHFYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A + LL AGAKG R ALP + IM+ Q
Sbjct: 72 VTAGLAIYDTMQYIKPDVSTICLGQAASMGSFLLAAGAKGKRYALPYARIMLHQ 125
>gi|347730688|ref|ZP_08863801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. A2]
gi|347520543|gb|EGY27675.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. A2]
Length = 201
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + LI A+ L+L+ E+ EK IYLYINS G G
Sbjct: 18 DIYSRLLKDRIILLGTPIDDQIASLICAQLLFLESENPEKEIYLYINSPG--------GA 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+ P+ TLC+G A ALLL AG G R ALP+S IMI Q
Sbjct: 70 VTAGMAIYDTMQYITSPVATLCLGQAASMGALLLAAGEPGMRHALPNSRIMIHQ 123
>gi|336424669|ref|ZP_08604704.1| Clp protease [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336014202|gb|EGN44059.1| Clp protease [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 217
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 70/119 (58%), Gaps = 8/119 (6%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L +RI++LG ELI+A+ L+L+ +D EK I LYINS G G
Sbjct: 38 DIMSRLLSDRIIFLGTQVDDVSAELIVAQLLFLESQDPEKDIQLYINSPG--------GS 89
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQAGDTG 213
T FAIYD M Y+K + T+C+G A A+LL G KG R ALP++ IMI QA +G
Sbjct: 90 ITAGFAIYDTMQYIKCDVSTVCIGMAASFGAVLLAGGTKGKRMALPNAEIMIHQAAISG 148
>gi|115459516|ref|NP_001053358.1| Os04g0525600 [Oryza sativa Japonica Group]
gi|113564929|dbj|BAF15272.1| Os04g0525600 [Oryza sativa Japonica Group]
gi|215768496|dbj|BAH00725.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 309
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 75/133 (56%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ MVI TS D+ S L K RIV + L++A+ L+L+ E+ KP
Sbjct: 86 LVPMVIEHTSRGERAY---DIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKP 142
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
++LYINS G G T AIYD M Y++ P+ TLC+G A A+LLL AGA+G
Sbjct: 143 VHLYINSPG--------GVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGE 194
Query: 196 RAALPSSTIMIKQ 208
R ALP++ +MI Q
Sbjct: 195 RRALPNARVMIHQ 207
>gi|403068129|ref|ZP_10909461.1| ATP-dependent Clp protease proteolytic subunit [Oceanobacillus sp.
Ndiop]
Length = 196
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V+ I+A+ L+L+ ED EK I LYINS G G
Sbjct: 19 DIYSRLLKDRIILLGSGIDDNVSNSIVAQLLFLEAEDPEKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTMNFIKPDVSTICIGMAASMGAFLLTAGQKGKRYALPNSEIMIHQ 124
>gi|119357822|ref|YP_912466.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeobacteroides DSM 266]
gi|166201813|sp|A1BI15.1|CLPP_CHLPD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119355171|gb|ABL66042.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeobacteroides DSM 266]
Length = 227
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ MVI TSG + D+ S L + RI++LG V LI+A+ ++L+ ED E+
Sbjct: 28 LVPMVIE-TSGRG--ERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPERD 84
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IY+Y+NS G G + IYD M Y++P + T+CVG A A LL +G KG
Sbjct: 85 IYIYVNSPG--------GSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGTKGK 136
Query: 196 RAALPSSTIMIKQ 208
RA+LP S IMI Q
Sbjct: 137 RASLPHSRIMIHQ 149
>gi|206973614|ref|ZP_03234532.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus H3081.97]
gi|206747770|gb|EDZ59159.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus H3081.97]
Length = 193
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL AGAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGLAASFGALLLLAGAKGKRFALPNSEIMIHQ 124
>gi|114567171|ref|YP_754325.1| ATP-dependent Clp protease proteolytic subunit [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|122317850|sp|Q0AWF0.1|CLPP_SYNWW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114338106|gb|ABI68954.1| ATP-dependent Clp protease proteolytic subunit ClpP [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
Length = 200
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 72/119 (60%), Gaps = 9/119 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V L++A+ L+L+ ED +K I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ-AGDT 212
T AIYD + Y++P + T+CVG A A LL AG KG R ALP++ IMI Q AG T
Sbjct: 72 ITAGMAIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEIMIHQPAGGT 130
>gi|89896100|ref|YP_519587.1| hypothetical protein DSY3354 [Desulfitobacterium hafniense Y51]
gi|219670517|ref|YP_002460952.1| ATP-dependent Clp protease proteolytic subunit [Desulfitobacterium
hafniense DCB-2]
gi|116243113|sp|Q24S49.1|CLPP2_DESHY RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|89335548|dbj|BAE85143.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219540777|gb|ACL22516.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfitobacterium hafniense DCB-2]
Length = 202
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V L++A+ L+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGPVTDDVANLVVAQMLFLEAEDPEKDIFLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M Y++ + T+CVG A A LL AGAKG R ALP++ I+I Q
Sbjct: 72 ISAGMAIYDTMQYIRADVHTICVGLAASMGAFLLTAGAKGKRQALPNAEILIHQ 125
>gi|228901328|ref|ZP_04065521.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
gi|228858306|gb|EEN02773.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
Length = 198
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK IYLYINS G G
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 76 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 129
>gi|229173439|ref|ZP_04300983.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
MM3]
gi|228610133|gb|EEK67411.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
MM3]
Length = 198
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL AGAKG R ALP+S IMI Q
Sbjct: 76 TTAGFAILDTMNLIKPDVQTLCMGLAASFGALLLLAGAKGKRFALPNSEIMIHQ 129
>gi|391228000|ref|ZP_10264207.1| protease subunit of ATP-dependent protease, partial [Opitutaceae
bacterium TAV1]
gi|391223493|gb|EIQ01913.1| protease subunit of ATP-dependent protease, partial [Opitutaceae
bacterium TAV1]
Length = 225
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 72 PRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYE 130
PR +++ +P T + D+ S L K+RI+++G V +++A+ L+LQ E
Sbjct: 13 PRHNIVSYYVPIVLENTGRGERSMDIYSRLLKDRIIFIGTPIDDGVANVVIAQLLFLQME 72
Query: 131 DVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGA 190
D +K I+LYINS G G T AIYD + +++ + T CVG A A +LL A
Sbjct: 73 DPKKDIHLYINSPG--------GVVTGGMAIYDTINFLQCDVVTYCVGQAASMATVLLSA 124
Query: 191 GAKGNRAALPSSTIMIKQ 208
G KG R ALP+S +MI Q
Sbjct: 125 GTKGKRFALPNSRVMIHQ 142
>gi|169334562|ref|ZP_02861755.1| hypothetical protein ANASTE_00965 [Anaerofustis stercorihominis DSM
17244]
gi|169259279|gb|EDS73245.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerofustis stercorihominis DSM 17244]
Length = 193
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 74/134 (55%), Gaps = 11/134 (8%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P+I MV+ G A + D+ S L K+RI++L V L++AE L+L+ ++ EK
Sbjct: 2 PLIPMVVE-NEGRA--ERSYDIYSRLLKDRIIFLSGEINDDVANLVVAEMLFLESQNSEK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I LYINS G G T AIYD M Y+K + T+C+G A A LL G KG
Sbjct: 59 DIQLYINSPG--------GSVTAGMAIYDTMNYIKCDVSTICIGMAASMGAFLLACGEKG 110
Query: 195 NRAALPSSTIMIKQ 208
R ALPSS IMI Q
Sbjct: 111 KRIALPSSEIMIHQ 124
>gi|162451419|ref|YP_001613786.1| endopeptidase Clp [Sorangium cellulosum So ce56]
gi|161162001|emb|CAN93306.1| Endopeptidase Clp [Sorangium cellulosum So ce56]
Length = 214
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
++ S L K+RIV++G V ++A+FL+L+ ED EK I +YINS G G
Sbjct: 38 NIFSRLLKDRIVFIGTEIDDFVANAVIAQFLFLESEDPEKEIQVYINSPG--------GV 89
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T A+YD M YV+ P+ T+C+G A A+LLGAG KG R ALP + +MI Q
Sbjct: 90 VTSGLAMYDTMQYVRCPVSTMCIGQAASMGAVLLGAGRKGRRFALPHARMMIHQ 143
>gi|315453779|ref|YP_004074049.1| ATP-dependent clp protease proteolytic subunit [Helicobacter felis
ATCC 49179]
gi|315132831|emb|CBY83459.1| ATP-dependent clp protease proteolytic subunit [Helicobacter felis
ATCC 49179]
Length = 197
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IPF T + D+ S L K+RIV L +V I+A+ L+L+ ED EK I LY
Sbjct: 4 IPFVIEKTGRGERSYDIYSRLLKDRIVLLSGEINDAVASSIVAQLLFLEAEDPEKDINLY 63
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T F+IYD M Y+ P I T+C+G A A LL GAKG R +L
Sbjct: 64 INSPG--------GSVTSGFSIYDTMNYIHPDICTICIGQAASMGAFLLSCGAKGKRFSL 115
Query: 200 PSSTIMIKQ 208
P S IMI Q
Sbjct: 116 PHSRIMIHQ 124
>gi|38344435|emb|CAE05641.2| OSJNBa0038O10.7 [Oryza sativa Japonica Group]
gi|116310954|emb|CAH67891.1| OSIGBa0153E02-OSIGBa0093I20.20 [Oryza sativa Indica Group]
gi|125549084|gb|EAY94906.1| hypothetical protein OsI_16707 [Oryza sativa Indica Group]
Length = 259
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 80/155 (51%), Gaps = 24/155 (15%)
Query: 67 FCKSKPRSP-------------VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFV 113
F S P +P ++ MVI TS D+ S L K RIV +
Sbjct: 14 FSSSTPHAPPPPAGYTQRREYGLVPMVIEHTSRGERAY---DIFSRLLKERIVCIHGPIT 70
Query: 114 PSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIF 173
L++A+ L+L+ E+ KP++LYINS G G T AIYD M Y++ P+
Sbjct: 71 DDTASLVVAQLLFLESENPAKPVHLYINSPG--------GVVTAGLAIYDTMQYIRSPVT 122
Query: 174 TLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
TLC+G A A+LLL AGA+G R ALP++ +MI Q
Sbjct: 123 TLCIGQAASMASLLLAAGARGERRALPNARVMIHQ 157
>gi|297531315|ref|YP_003672590.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacillus
sp. C56-T3]
gi|297254567|gb|ADI28013.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. C56-T3]
Length = 196
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG V I+++ L+L ED EK I LYINS G G
Sbjct: 19 DIYSRLLKDRIVFLGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQ 124
>gi|419596935|ref|ZP_14131928.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23341]
gi|419599386|ref|ZP_14134247.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23342]
gi|419610718|ref|ZP_14144774.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H8]
gi|380574911|gb|EIA97002.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23341]
gi|380575198|gb|EIA97282.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23342]
gi|380589478|gb|EIB10539.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H8]
Length = 194
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M IP+ T+ + D+ S L K+RI+ L + I+A+ L+L+ ED K IY
Sbjct: 1 MYIPYVIEKTSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T F+IYD M Y+KP + T+C+G A A LL GA+G R
Sbjct: 61 LYINSPG--------GVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 113 ALPNSRIMIHQ 123
>gi|224030041|gb|ACN34096.1| unknown [Zea mays]
gi|414586294|tpg|DAA36865.1| TPA: ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 259
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 25/157 (15%)
Query: 66 SFCKSKPRSP--------------VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMS 111
+F S P +P ++ MVI TS + D+ S L K RIV +
Sbjct: 12 TFSSSSPHAPPLAASGYTPRREYGLVPMVIEHTS---RGERAYDIFSRLLKERIVCIHGP 68
Query: 112 FVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPP 171
L++A+ L+L+ E+ KP++LYINS G G T AIYD M Y++ P
Sbjct: 69 ITDDTASLVVAQLLFLESENPAKPVHLYINSPG--------GVVTAGLAIYDTMQYIRSP 120
Query: 172 IFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ TLC+G A A+LLL AGA G R ALP++ +MI Q
Sbjct: 121 VTTLCIGQAASMASLLLAAGASGERRALPNARVMIHQ 157
>gi|254431764|ref|ZP_05045467.1| Clp protease [Cyanobium sp. PCC 7001]
gi|197626217|gb|EDY38776.1| Clp protease [Cyanobium sp. PCC 7001]
Length = 200
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 76/135 (56%), Gaps = 10/135 (7%)
Query: 75 PVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
P+ T +P+ G+ +E+ D+ + L RI+++G +V ++A+ LYL ED
Sbjct: 2 PIGTPSVPYRLPGSQYERWV-DIYTRLGVERILFMGSEVNDAVANALVAQMLYLDSEDSS 60
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
KPIYLYINS G G T AIYD M YVK + T+CVG A A LLGAG K
Sbjct: 61 KPIYLYINSPG--------GSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLGAGTK 112
Query: 194 GNRAALPSSTIMIKQ 208
G R ALP S IMI Q
Sbjct: 113 GKRLALPHSRIMIHQ 127
>gi|118474160|ref|YP_892812.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter fetus
subsp. fetus 82-40]
gi|424821464|ref|ZP_18246502.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter fetus
subsp. venerealis NCTC 10354]
gi|118413386|gb|ABK81806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
fetus subsp. fetus 82-40]
gi|342328243|gb|EGU24727.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter fetus
subsp. venerealis NCTC 10354]
Length = 196
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ T+ + D+ S L K+RI+ L ++ I+A+ L+L+ ED +K IYLY
Sbjct: 5 IPYVVERTSKGERSYDIYSRLLKDRIIMLSGEIEDAMASAIVAQMLFLEAEDPDKDIYLY 64
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T F+IYD M Y+KP + T+C+G A A LL G KG R AL
Sbjct: 65 INSPG--------GVVTSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGTKGKRYAL 116
Query: 200 PSSTIMIKQ 208
P+S IMI Q
Sbjct: 117 PNSRIMIHQ 125
>gi|147677139|ref|YP_001211354.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
gi|259585961|sp|A5D447.1|CLPP_PELTS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146273236|dbj|BAF58985.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
Length = 194
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + LI+A+ L+L+ ED EK I YINS G G
Sbjct: 19 DIYSRLLKDRIIFLGGPIDDNTANLIIAQMLFLEAEDPEKDIQFYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YV+ P+ T+C+G A A+LLL AGAKG R +LP + I+I Q
Sbjct: 71 VTAGMAIYDTMQYVRSPVATICIGQAASMASLLLAAGAKGKRYSLPYARILIHQ 124
>gi|229139426|ref|ZP_04267997.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST26]
gi|228643973|gb|EEL00234.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST26]
Length = 164
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ T + D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LY
Sbjct: 4 IPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLY 63
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T FAI D M +KP + TLC+G A ALLL +GAKG R AL
Sbjct: 64 INSPG--------GSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFAL 115
Query: 200 PSSTIMIKQ 208
P+S IMI Q
Sbjct: 116 PNSEIMIHQ 124
>gi|451948362|ref|YP_007468957.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfocapsa
sulfexigens DSM 10523]
gi|451907710|gb|AGF79304.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfocapsa
sulfexigens DSM 10523]
Length = 200
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG S VT I+A+ L+L+ ED +K I YINS G G
Sbjct: 19 DIYSRLLRERIVFLGTSVGDDVTSSIVAQLLFLEAEDPDKDITFYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVK I TLC+G A ALLL AG G R ALP+S IMI Q
Sbjct: 71 VTAGLAIYDTMQYVKCDIATLCMGQAASMGALLLAAGTAGKRYALPNSRIMIHQ 124
>gi|427718283|ref|YP_007066277.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
gi|427350719|gb|AFY33443.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
Length = 201
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG S+ LI+A+ L+L +D EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDNSIANLIVAQLLFLDADDSEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P + T+C G A A LL AGAKG R +LP S IMI Q
Sbjct: 69 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
>gi|403385525|ref|ZP_10927582.1| ATP-dependent Clp protease proteolytic subunit [Kurthia sp. JC30]
Length = 201
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANAIVSQLLFLEAEDPEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A + LL AG KG R ALP++ IMI Q
Sbjct: 71 VTAGMAIYDTMQFIKPDVQTICIGMAASMGSFLLTAGKKGKRFALPNAEIMIHQ 124
>gi|150388889|ref|YP_001318938.1| ATP-dependent Clp protease proteolytic subunit [Alkaliphilus
metalliredigens QYMF]
gi|167008644|sp|A6TM61.1|CLPP_ALKMQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|149948751|gb|ABR47279.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alkaliphilus
metalliredigens QYMF]
Length = 194
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG L++A+ L+L+ ED +K I +YINS G G
Sbjct: 19 DIFSRLLKERIIFLGDEINDVTASLLVAQLLFLEAEDPDKDIQIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG A A LL AGAKG R ALP++ +MI Q
Sbjct: 71 ITAGMAIYDTMNYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|406706127|ref|YP_006756480.1| ATP-dependent Clp protease proteolytic subunit ClpP [alpha
proteobacterium HIMB5]
gi|406651903|gb|AFS47303.1| ATP-dependent Clp protease proteolytic subunit ClpP [alpha
proteobacterium HIMB5]
Length = 203
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L +V L+ A+ L+L+ ED +K IYLYINS G G
Sbjct: 28 DIYSRLLKERIIFLTGQINDNVASLVTAQLLFLEAEDPKKEIYLYINSPG--------GL 79
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T IYD M Y+KP I TLC+G A + LL AG+KG R +LP+S +M+ Q
Sbjct: 80 VTAGLGIYDTMQYIKPEISTLCIGQAASMGSFLLAAGSKGKRFSLPNSRVMVHQ 133
>gi|255565556|ref|XP_002523768.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223536980|gb|EEF38617.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 296
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV + +++A+ L+L+ E+ KPI++Y+NS G G
Sbjct: 103 DIFSRLLKERIVCINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPG--------GQ 154
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y++ PI T+C+G A A+LLL AGAKG R +LP++TIMI Q
Sbjct: 155 VTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERKSLPNATIMIHQ 208
>gi|427418142|ref|ZP_18908325.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
gi|425760855|gb|EKV01708.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
Length = 201
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + LI+A+ L+L+ ED E+ IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVTAESSNLIVAQMLFLEAEDPERDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ I+D M ++KP + T+CVG A A LL AG KG R +LP+S IMI Q
Sbjct: 69 VYDGLGIFDTMNHIKPDVSTICVGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQ 122
>gi|229185008|ref|ZP_04312198.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BGSC 6E1]
gi|376266654|ref|YP_005119366.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F837/76]
gi|228598483|gb|EEK56113.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BGSC 6E1]
gi|364512454|gb|AEW55853.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F837/76]
Length = 193
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|428306359|ref|YP_007143184.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
gi|428247894|gb|AFZ13674.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
Length = 202
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDADLANLIVAQLLFLEAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ I+D M ++P I T+CVG A A LL AGAKG R +LP S IMI Q
Sbjct: 69 VSAGMGIFDTMNQIRPDISTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
>gi|254455562|ref|ZP_05068991.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Pelagibacter sp. HTCC7211]
gi|207082564|gb|EDZ59990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Pelagibacter sp. HTCC7211]
Length = 203
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L +V L+ A+ L+L+ ED +K IYLYINS G G
Sbjct: 28 DIYSRLLKERIIFLTGQINDNVASLVTAQLLFLEAEDPKKEIYLYINSPG--------GL 79
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T IYD M YVKP I TLC+G A + LL AG KG R +LP+S +M+ Q
Sbjct: 80 VTAGLGIYDTMQYVKPDISTLCIGQAASMGSFLLAAGTKGKRFSLPNSRVMVHQ 133
>gi|183220373|ref|YP_001838369.1| ATP-dependent Clp protease proteolytic subunit [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189910487|ref|YP_001962042.1| ATP-dependent Clp protease proteolytic subunit [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167775163|gb|ABZ93464.1| Protease subunit of endopeptidase Clp [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167778795|gb|ABZ97093.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 200
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI++LG + + A+ L+L+ E+ ++ IYLYINS G GY
Sbjct: 20 DVYSRLLRDRIIFLGAGIDDTYANAVCAQLLFLEAENPDRDIYLYINSPG--------GY 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M +KP + TLC+G A AALLL GAKG R+ALP+ IM+ Q
Sbjct: 72 VSSGLAIYDTMQLIKPEVRTLCIGQASSMAALLLAGGAKGKRSALPNGRIMMHQ 125
>gi|428225971|ref|YP_007110068.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
gi|427985872|gb|AFY67016.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
Length = 200
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 17 DIYSKLLQERIIFLGQPVDSDLANLIVAQLLFLEAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ I+D M +VKP + T+C+G A A LL AGAKG R +LP+S IMI Q
Sbjct: 69 VSAGMGIFDTMNHVKPDVCTICLGLAASMGAFLLAAGAKGKRMSLPNSRIMIHQ 122
>gi|229196961|ref|ZP_04323701.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1293]
gi|228586518|gb|EEK44596.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1293]
Length = 198
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 24 DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 76 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 129
>gi|359453081|ref|ZP_09242406.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20495]
gi|414070583|ref|ZP_11406566.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
Bsw20308]
gi|358049849|dbj|GAA78655.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20495]
gi|410807037|gb|EKS13020.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
Bsw20308]
Length = 205
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 21/144 (14%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEF 124
+ P + ++ MV+ EQ P D+ S L K RI++L ++ LILA+
Sbjct: 6 TDPLNALVPMVV--------EQTPKGERSYDIYSRLLKERIIFLTGQVEDNMANLILAQM 57
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T AIYD M ++KP + T+CVG A
Sbjct: 58 LFLESENPDKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMG 109
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 110 AFLLTAGAKGKRFCLPNSRVMIHQ 133
>gi|253575671|ref|ZP_04853007.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845009|gb|EES73021.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
Length = 196
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++L + V L++A+ L+L ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLSNAIDDEVANLVIAQLLFLAAEDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T IYD M Y+KP + T+CVG A +LLL AGA G R ALP+S +MI Q
Sbjct: 71 VTAGMGIYDTMQYIKPDVSTICVGMAASMGSLLLTAGAPGKRYALPNSEVMIHQ 124
>gi|359440399|ref|ZP_09230319.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20429]
gi|392534093|ref|ZP_10281230.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
arctica A 37-1-2]
gi|358037712|dbj|GAA66568.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20429]
Length = 205
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 21/144 (14%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEF 124
+ P + ++ MV+ EQ P D+ S L K RI++L ++ LILA+
Sbjct: 6 TDPLNALVPMVV--------EQTPKGERSYDIYSRLLKERIIFLTGQVEDNMANLILAQM 57
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T AIYD M ++KP + T+CVG A
Sbjct: 58 LFLESENPDKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMG 109
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 110 AFLLTAGAKGKRFCLPNSRVMIHQ 133
>gi|288554081|ref|YP_003426016.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
pseudofirmus OF4]
gi|288545241|gb|ADC49124.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
pseudofirmus OF4]
Length = 195
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+A+ L+LQ ED EK I LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLQAEDPEKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG G R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMNFIKPKVSTICIGMAASMGAFLLAAGEPGKRLALPNSEVMIHQ 124
>gi|229161662|ref|ZP_04289642.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
gi|228621907|gb|EEK78753.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
Length = 193
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ T + D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LY
Sbjct: 4 IPYVVEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLY 63
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T FAI D M +KP + TLC+G A ALLL +GAKG R AL
Sbjct: 64 INSPG--------GSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFAL 115
Query: 200 PSSTIMIKQ 208
P+S IMI Q
Sbjct: 116 PNSEIMIHQ 124
>gi|359434423|ref|ZP_09224688.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20652]
gi|357918931|dbj|GAA60937.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20652]
Length = 205
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 21/144 (14%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEF 124
+ P + ++ MV+ EQ P D+ S L K RI++L ++ LILA+
Sbjct: 6 TDPLNALVPMVV--------EQTPKGERSYDIYSRLLKERIIFLTGQVEDNMANLILAQM 57
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T AIYD M ++KP + T+CVG A
Sbjct: 58 LFLESENPDKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMG 109
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 110 AFLLTAGAKGKRFCLPNSRVMIHQ 133
>gi|30262760|ref|NP_845137.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Ames]
gi|47528081|ref|YP_019430.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. 'Ames Ancestor']
gi|49185606|ref|YP_028858.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. Sterne]
gi|49479126|ref|YP_036877.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|165868336|ref|ZP_02212996.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0488]
gi|167632654|ref|ZP_02390981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0442]
gi|167637842|ref|ZP_02396121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0193]
gi|170685514|ref|ZP_02876738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0465]
gi|170704851|ref|ZP_02895317.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0389]
gi|177649633|ref|ZP_02932635.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0174]
gi|190565733|ref|ZP_03018653.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Tsiankovskii-I]
gi|196032272|ref|ZP_03099686.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus W]
gi|196041667|ref|ZP_03108958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NVH0597-99]
gi|218903911|ref|YP_002451745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|227814400|ref|YP_002814409.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. CDC 684]
gi|228927840|ref|ZP_04090888.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228946399|ref|ZP_04108720.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|229122335|ref|ZP_04251549.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
95/8201]
gi|229600104|ref|YP_002867067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0248]
gi|254685352|ref|ZP_05149212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. CNEVA-9066]
gi|254737808|ref|ZP_05195511.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Western North America USA6153]
gi|254743018|ref|ZP_05200703.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Kruger B]
gi|254752122|ref|ZP_05204159.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Vollum]
gi|254760643|ref|ZP_05212667.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Australia 94]
gi|300118751|ref|ZP_07056477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus SJ1]
gi|301054310|ref|YP_003792521.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
biovar anthracis str. CI]
gi|384180673|ref|YP_005566435.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|386736531|ref|YP_006209712.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus
anthracis str. H9401]
gi|421510220|ref|ZP_15957116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. UR-1]
gi|421636577|ref|ZP_16077176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. BF1]
gi|423575567|ref|ZP_17551686.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
MSX-D12]
gi|423605510|ref|ZP_17581403.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD102]
gi|67460478|sp|Q6HHU9.1|CLPP1_BACHK RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|67460529|sp|Q81PL4.1|CLPP1_BACAN RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|30257392|gb|AAP26623.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Ames]
gi|47503229|gb|AAT31905.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. 'Ames Ancestor']
gi|49179533|gb|AAT54909.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Sterne]
gi|49330682|gb|AAT61328.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|164715062|gb|EDR20579.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0488]
gi|167514391|gb|EDR89758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0193]
gi|167532952|gb|EDR95588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0442]
gi|170130652|gb|EDS99513.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0389]
gi|170670874|gb|EDT21613.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0465]
gi|172084707|gb|EDT69765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0174]
gi|190563760|gb|EDV17725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Tsiankovskii-I]
gi|195995023|gb|EDX58977.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus W]
gi|196027436|gb|EDX66052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NVH0597-99]
gi|218536563|gb|ACK88961.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|227007231|gb|ACP16974.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. CDC 684]
gi|228661184|gb|EEL16810.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
95/8201]
gi|228813262|gb|EEM59562.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228831903|gb|EEM77492.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|229264512|gb|ACQ46149.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0248]
gi|298723908|gb|EFI64624.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus SJ1]
gi|300376479|gb|ADK05383.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus
biovar anthracis str. CI]
gi|324326757|gb|ADY22017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|384386383|gb|AFH84044.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus
anthracis str. H9401]
gi|401208892|gb|EJR15652.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
MSX-D12]
gi|401242865|gb|EJR49236.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD102]
gi|401819676|gb|EJT18850.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. UR-1]
gi|403397105|gb|EJY94342.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. BF1]
Length = 193
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|145219256|ref|YP_001129965.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
phaeovibrioides DSM 265]
gi|189082462|sp|A4SDA4.1|CLPP_PROVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|145205420|gb|ABP36463.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeovibrioides DSM 265]
Length = 225
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 79/136 (58%), Gaps = 11/136 (8%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
++ ++ MVI TSG + D+ S L + RI++LG V LI+A+ ++L+ ED
Sbjct: 25 QNSLVPMVIE-TSGRG--ERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDP 81
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
++ I++Y+NS G G + IYD M Y++P + T+CVG A A LL +GA
Sbjct: 82 DRDIFIYVNSPG--------GSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGA 133
Query: 193 KGNRAALPSSTIMIKQ 208
KG RA+LP S IMI Q
Sbjct: 134 KGKRASLPHSRIMIHQ 149
>gi|323144789|ref|ZP_08079363.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Succinatimonas hippei YIT 12066]
gi|322415435|gb|EFY06195.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Succinatimonas hippei YIT 12066]
Length = 200
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 75/135 (55%), Gaps = 11/135 (8%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
S ++ MVI TA + D+ S L K R++++ + +LI+A+ L+L+ +D +
Sbjct: 3 STLVPMVI---EQTARGERSFDIYSRLLKERVIFMTGEVEDHMADLIVAQLLFLESDDPD 59
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
K IYLYINS G G T AIYD M Y+KP + TLC+G A + LL GA
Sbjct: 60 KDIYLYINSPG--------GVVTAGMAIYDTMQYIKPDVCTLCMGQACSMGSFLLAGGAP 111
Query: 194 GNRAALPSSTIMIKQ 208
G R ALP S IMI Q
Sbjct: 112 GKRFALPHSRIMIHQ 126
>gi|170049615|ref|XP_001857723.1| ATP-dependent Clp protease proteolytic subunit [Culex
quinquefasciatus]
gi|167871378|gb|EDS34761.1| ATP-dependent Clp protease proteolytic subunit [Culex
quinquefasciatus]
Length = 225
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L ++ LI+A+ L+LQ E+ KPI++YINS G G
Sbjct: 43 DIFSRLLKERIICLMGPIHDDLSSLIVAQLLFLQSENGTKPIHMYINSPG--------GS 94
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKPP+ T CVG A +LLL AGA G R +LP++ IMI Q
Sbjct: 95 VTAGLAIYDTMQYVKPPVATWCVGQACSMGSLLLAAGAPGMRHSLPNARIMIHQ 148
>gi|226470102|emb|CAX70332.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Schistosoma japonicum]
Length = 179
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L + V L++A+ LYLQ ED + PI++YINS G G
Sbjct: 64 DIYSRLLKDRIICLMGAISDEVAGLVVAQLLYLQSEDKKIPIHIYINSPG--------GV 115
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KPP+ T CVG A +LLL AGA G R ALP S IM+ Q
Sbjct: 116 VTAGLAIYDTMQFIKPPVATWCVGQASSMGSLLLAAGAPGLRFALPHSRIMVHQ 169
>gi|374997740|ref|YP_004973239.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus orientis DSM 765]
gi|357216106|gb|AET70724.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus orientis DSM 765]
Length = 204
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + V L++A+ L+L+ ED EK I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGAIDDDVANLVVAQMLFLEAEDPEKDINLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y++ + T+C+G A A LL +GAKG RAALP++ ++I Q
Sbjct: 72 ITAGMAIYDTMQYIRSDVRTICIGMAASMGAFLLASGAKGKRAALPNAEVLIHQ 125
>gi|332532271|ref|ZP_08408152.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
haloplanktis ANT/505]
gi|332038369|gb|EGI74814.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
haloplanktis ANT/505]
Length = 205
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 21/144 (14%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEF 124
+ P + ++ MV+ EQ P D+ S L K RI++L ++ LILA+
Sbjct: 6 TDPLNALVPMVV--------EQTPKGERSYDIYSRLLKERIIFLTGQVEDNMANLILAQM 57
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T AIYD M ++KP + T+CVG A
Sbjct: 58 LFLESENPDKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMG 109
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 110 AFLLTAGAKGKRFCLPNSRVMIHQ 133
>gi|428209784|ref|YP_007094137.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
gi|428011705|gb|AFY90268.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
Length = 202
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG + ++ LI+A+ LYL ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIIFLGQAIDSNLANLIVAQLLYLDAEDGEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P + T+C G A A LL AG KG R +LP+S IMI Q
Sbjct: 69 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQ 122
>gi|335038541|ref|ZP_08531774.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
gi|334181561|gb|EGL84093.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
Length = 196
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V ++A+ L+L ED EK I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTPIDDQVANAVVAQLLFLAAEDPEKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQYIKPKVSTICIGLAASMGAFLLAAGEKGKRFALPNSEVMIHQ 124
>gi|218289882|ref|ZP_03494072.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|258511244|ref|YP_003184678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|384134931|ref|YP_005517645.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|218240022|gb|EED07208.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|257477970|gb|ACV58289.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|339289016|gb|AEJ43126.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
Length = 192
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 76/130 (58%), Gaps = 9/130 (6%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
+IP+ T+ + D+ S L K+RI++LG V ++A+ L+L +D +K I +
Sbjct: 3 LIPYVIEQTSRGERSYDIYSRLLKDRIIFLGTPIDDDVANAVVAQLLFLAADDPDKDIQM 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G + AIYD M ++KP + T+CVG A AA+LL AGAKG R A
Sbjct: 63 YINSPG--------GSVSAGLAIYDTMQHIKPDVSTMCVGMAASMAAVLLAAGAKGKRYA 114
Query: 199 LPSSTIMIKQ 208
LP+S +MI Q
Sbjct: 115 LPNSEVMIHQ 124
>gi|343496564|ref|ZP_08734660.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
nigripulchritudo ATCC 27043]
gi|342821177|gb|EGU55971.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
nigripulchritudo ATCC 27043]
Length = 208
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 9/144 (6%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP+I ++P T+ + D+ S L K RI++L + L++A+
Sbjct: 2 SYQEKNAMSPIIDALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDQMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M Y+KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQYIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL GA+G R LP+S +MI Q
Sbjct: 114 AFLLAGGAEGKRHVLPNSRVMIHQ 137
>gi|186686250|ref|YP_001869446.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
gi|186468702|gb|ACC84503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
Length = 203
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG ++ LI+A+ LYL ED EK IY+YINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDNNIANLIVAQLLYLDAEDPEKDIYMYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P + T+C G A A LL AGAKG R +LP S IMI Q
Sbjct: 69 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
>gi|258646880|ref|ZP_05734349.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dialister
invisus DSM 15470]
gi|260404319|gb|EEW97866.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dialister
invisus DSM 15470]
Length = 207
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 72/122 (59%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T+ + D+ S L K+RIV+L +I+A+FL+L+ ED +K I+ YINS G
Sbjct: 11 TSHGERSYDIYSRLLKDRIVFLDGPIDDHTANVIIAQFLFLEAEDPDKDIHFYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M Y++P + T+C+G+ AA+LL AG KG R ALP +++MI
Sbjct: 69 ------GVVTAGMAIYDTMQYIRPDVSTICIGSCASMAAVLLTAGEKGKRYALPHASVMI 122
Query: 207 KQ 208
Q
Sbjct: 123 HQ 124
>gi|226501814|ref|NP_001150578.1| LOC100284211 [Zea mays]
gi|195640324|gb|ACG39630.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 260
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 75/133 (56%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ MVI TS + D+ S L K RIV + L++A+ L+L+ E+ KP
Sbjct: 37 LVPMVIEHTS---RGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKP 93
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
++LYINS G G T AIYD M Y++ P+ TLC+G A A+LLL AGA G
Sbjct: 94 VHLYINSPG--------GVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGQ 145
Query: 196 RAALPSSTIMIKQ 208
R ALP++ +MI Q
Sbjct: 146 RRALPNARVMIHQ 158
>gi|307150040|ref|YP_003885424.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
gi|306980268|gb|ADN12149.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
Length = 203
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV+LG + LI+A+ L+L+ ED +K IYLYINS G G
Sbjct: 17 DIYSRLLRDRIVFLGQEVTNDLANLIVAQLLFLESEDPDKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ I+D M ++P + T+C+G A A LL AGAKG R +LP+S IMI Q
Sbjct: 69 VSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLNAGAKGKRMSLPNSRIMIHQ 122
>gi|419538375|ref|ZP_14077733.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
90-3]
gi|419539983|ref|ZP_14079226.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
Z163]
gi|419545413|ref|ZP_14084317.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2553]
gi|419548526|ref|ZP_14087147.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2685]
gi|419553494|ref|ZP_14091731.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2692]
gi|419555151|ref|ZP_14093255.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2698]
gi|419556647|ref|ZP_14094627.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
84-2]
gi|419560556|ref|ZP_14098196.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
86119]
gi|419562618|ref|ZP_14100124.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1091]
gi|419566976|ref|ZP_14104219.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1148]
gi|419573882|ref|ZP_14110666.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1891]
gi|419585477|ref|ZP_14121530.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
202/04]
gi|419587901|ref|ZP_14123770.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
67-8]
gi|419593793|ref|ZP_14128997.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 9854]
gi|419595883|ref|ZP_14130968.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23336]
gi|419600679|ref|ZP_14135429.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23344]
gi|419603459|ref|ZP_14138009.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
151-9]
gi|419604516|ref|ZP_14138980.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 9853]
gi|419614505|ref|ZP_14148286.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H56]
gi|419616077|ref|ZP_14149730.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
Z156]
gi|380518026|gb|EIA44128.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
Z163]
gi|380518081|gb|EIA44182.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
90-3]
gi|380522334|gb|EIA48022.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2553]
gi|380527365|gb|EIA52755.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2685]
gi|380528656|gb|EIA53899.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2692]
gi|380530561|gb|EIA55629.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2698]
gi|380534497|gb|EIA59281.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
84-2]
gi|380536913|gb|EIA61503.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
86119]
gi|380540547|gb|EIA64849.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1091]
gi|380544994|gb|EIA68992.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1148]
gi|380550548|gb|EIA74196.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1891]
gi|380561525|gb|EIA84451.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
67-8]
gi|380562019|gb|EIA84912.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
202/04]
gi|380568895|gb|EIA91353.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 9854]
gi|380572687|gb|EIA94888.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23336]
gi|380578721|gb|EIB00549.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
151-9]
gi|380579883|gb|EIB01660.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 9853]
gi|380582709|gb|EIB04328.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23344]
gi|380592651|gb|EIB13521.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H56]
gi|380596177|gb|EIB16879.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
Z156]
Length = 194
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M IP+ T+ + D+ S L K+RI+ L + I+A+ L+L+ ED +K IY
Sbjct: 1 MYIPYVIEKTSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPQKDIY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T F+IYD M Y+KP + T+C+G A A LL G +G R
Sbjct: 61 LYINSPG--------GVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGTEGKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 113 ALPNSRIMIHQ 123
>gi|359447956|ref|ZP_09237512.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20480]
gi|392538775|ref|ZP_10285912.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
marina mano4]
gi|358046180|dbj|GAA73761.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20480]
Length = 205
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 21/144 (14%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEF 124
+ P + ++ MV+ EQ P D+ S L K RI++L ++ LILA+
Sbjct: 6 TDPLNALVPMVV--------EQTPKGERSYDIYSRLLKERIIFLTGQVEDNMANLILAQM 57
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T AIYD M ++KP + T+CVG A
Sbjct: 58 LFLESENPDKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMG 109
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 110 AFLLTAGAKGKRFCLPNSRVMIHQ 133
>gi|51246390|ref|YP_066274.1| ATP-dependent Clp protease, proteolytic subunit (ClpP)
[Desulfotalea psychrophila LSv54]
gi|50877427|emb|CAG37267.1| probable ATP-dependent Clp protease, proteolytic subunit (ClpP)
[Desulfotalea psychrophila LSv54]
Length = 213
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 73/136 (53%), Gaps = 8/136 (5%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
RS ++ ++ T + D+ S L K RI++LG V +I+A+ L+L+ ED
Sbjct: 7 RSVIMNLIPMVVEQTPRGERSYDIYSRLLKERIIFLGSGVNDDVANVIVAQLLFLEAEDP 66
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
EK I YINS G G T AIYD M Y+K I TLC+G A A+LL AG
Sbjct: 67 EKDITFYINSPG--------GSVTAGMAIYDTMQYIKCDIATLCMGQAASMGAVLLAAGT 118
Query: 193 KGNRAALPSSTIMIKQ 208
G R ALP+S IMI Q
Sbjct: 119 AGKRYALPNSRIMIHQ 134
>gi|254722760|ref|ZP_05184548.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A1055]
Length = 193
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSSLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|150020876|ref|YP_001306230.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
melanesiensis BI429]
gi|149793397|gb|ABR30845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosipho
melanesiensis BI429]
Length = 202
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 76 VITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
+I +P T + D+ S L K+RIV+LG + V LI+A+ L+L+ ED +K
Sbjct: 4 IIDQYVPMVVENTGRYERAYDIYSRLLKDRIVFLGSAIDDHVANLIVAQLLFLEAEDPDK 63
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I LYINS G G + AIYD M YVK + T+C+G A A+LL G KG
Sbjct: 64 DIQLYINSPG--------GSVSAGLAIYDTMQYVKCDVTTICIGQAASMGAVLLAGGTKG 115
Query: 195 NRAALPSSTIMIKQ 208
R +LP+S IMI Q
Sbjct: 116 KRFSLPNSRIMIHQ 129
>gi|354566299|ref|ZP_08985472.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353546807|gb|EHC16255.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 201
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG + +V LI+A+ L+L ED EK IY+YINS G G
Sbjct: 17 DIYSRLLRERIIFLGQAIDDNVANLIVAQLLFLDAEDPEKDIYVYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P + T+C G A A LL AGAKG R +LP S IMI Q
Sbjct: 69 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
>gi|302035647|ref|YP_003795969.1| ATP-dependent Clp protease proteolytic subunit clpP [Candidatus
Nitrospira defluvii]
gi|300603711|emb|CBK40042.1| ATP-dependent Clp protease, proteolytic subunit clpP [Candidatus
Nitrospira defluvii]
Length = 211
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG LI+A+ L+L+ ED EK I LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGAPIDDVFANLIIAQLLFLEAEDPEKDINLYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T IYD M YVKP I T+C+G A A LL AG KG R ALP++ +MI Q
Sbjct: 70 VTAGLGIYDTMQYVKPAINTICLGQAASMGAFLLTAGTKGKRYALPNARVMIHQ 123
>gi|226489631|emb|CAX74966.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Schistosoma japonicum]
Length = 249
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L + V L++A+ LYLQ ED + PI++YINS G G
Sbjct: 60 DIYSRLLKDRIICLMGAISDEVAGLVVAQLLYLQSEDKKIPIHIYINSPG--------GV 111
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KPP+ T CVG A +LLL AGA G R ALP S IM+ Q
Sbjct: 112 VTAGLAIYDTMQFIKPPVATWCVGQASSMGSLLLAAGAPGLRFALPHSRIMVHQ 165
>gi|229030470|ref|ZP_04186509.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1271]
gi|228730841|gb|EEL81782.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1271]
Length = 198
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ T + D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LY
Sbjct: 9 IPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLY 68
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T FAI D M +KP + TLC+G A ALLL +GAKG R AL
Sbjct: 69 INSPG--------GSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFAL 120
Query: 200 PSSTIMIKQ 208
P+S IMI Q
Sbjct: 121 PNSEIMIHQ 129
>gi|332296030|ref|YP_004437953.1| ATP-dependent Clp protease proteolytic subunit [Thermodesulfobium
narugense DSM 14796]
gi|332179133|gb|AEE14822.1| ATP-dependent Clp protease proteolytic subunit [Thermodesulfobium
narugense DSM 14796]
Length = 199
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 9/131 (6%)
Query: 79 MVIP-FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
++IP T T+ + D+ S L +RI++LG + V L++A+ L+L+ +D + IY
Sbjct: 7 ILIPTVTERTSHGERVYDIYSKLLNDRIIFLGTAINEDVANLVVAQMLFLEADDPNRDIY 66
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M YVK P+ T+C G A AA++L AG +G R
Sbjct: 67 LYINSPG--------GIVTAGLAIYDTMQYVKSPVNTICFGQAASMAAVILAAGERGKRY 118
Query: 198 ALPSSTIMIKQ 208
LP+S ++I Q
Sbjct: 119 CLPNSRVLIHQ 129
>gi|423611176|ref|ZP_17587037.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD107]
gi|401248629|gb|EJR54951.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD107]
Length = 193
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGLAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|428313411|ref|YP_007124388.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
gi|428255023|gb|AFZ20982.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
Length = 198
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P + +P + T W D+ + LY+ RI++LG + I+A LYL ED K
Sbjct: 6 PKVPYQLPGSQYTEW----VDIYNRLYRERIIFLGQEVDDEIANQIIAVMLYLDSEDNSK 61
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
IYLYINS G G T AIYD M ++K + T+CVG A + LL AG KG
Sbjct: 62 DIYLYINSPG--------GMVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGKKG 113
Query: 195 NRAALPSSTIMIKQ 208
R ALP S IMI Q
Sbjct: 114 KRLALPHSRIMIHQ 127
>gi|255323211|ref|ZP_05364346.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
showae RM3277]
gi|424783006|ref|ZP_18209849.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
showae CSUNSWCD]
gi|255299734|gb|EET79016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
showae RM3277]
gi|421959149|gb|EKU10760.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
showae CSUNSWCD]
Length = 196
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ T+ + D+ S L K+RI+ L + I+A+ L+L+ ED +K IYLY
Sbjct: 5 IPYVIERTSKGERSYDIYSRLLKDRIIMLSGEIEDGMASAIVAQMLFLEAEDPDKDIYLY 64
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T F+IYD M Y+KP + T+C+G A A LL GA+G R AL
Sbjct: 65 INSPG--------GVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAQGKRYAL 116
Query: 200 PSSTIMIKQ 208
P+S IMI Q
Sbjct: 117 PNSRIMIHQ 125
>gi|210621780|ref|ZP_03292809.1| hypothetical protein CLOHIR_00754 [Clostridium hiranonis DSM 13275]
gi|210154544|gb|EEA85550.1| hypothetical protein CLOHIR_00754 [Clostridium hiranonis DSM 13275]
Length = 195
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++L LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIFSRLLKDRIIFLCDEVNDDTAGLIVAQLLFLEAEDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A LL +GAKG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTMNYIKPDVSTICIGMAASMGAFLLSSGAKGKRYALPNSEIMIHQ 124
>gi|17228733|ref|NP_485281.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|21759071|sp|Q8YXH5.1|CLPP1_ANASP RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|17130585|dbj|BAB73195.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
Length = 204
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG ++ LI+A+ L+L ED EK IYLYINS G G
Sbjct: 18 DIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P + T+C G A A LL AGAKG R +LP S IMI Q
Sbjct: 70 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 123
>gi|423396717|ref|ZP_17373918.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG2X1-1]
gi|423407568|ref|ZP_17384717.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG2X1-3]
gi|401651293|gb|EJS68858.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG2X1-1]
gi|401658894|gb|EJS76383.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG2X1-3]
Length = 193
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|194334636|ref|YP_002016496.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prosthecochloris aestuarii DSM 271]
gi|194312454|gb|ACF46849.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prosthecochloris aestuarii DSM 271]
Length = 226
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 11/136 (8%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
++ ++ MVI TSG + D+ S L + RI++LG V L++A+ ++L+ ED
Sbjct: 25 QNSLVPMVIE-TSGRG--ERAFDIFSRLLRERIIFLGTPIDEHVASLLMAQLIFLESEDP 81
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
E+ IY+YINS G G + IYD M Y++P + T+CVG A A LL +GA
Sbjct: 82 ERDIYIYINSPG--------GSVSAGLGIYDTMQYIRPEVSTVCVGMAASMGAFLLASGA 133
Query: 193 KGNRAALPSSTIMIKQ 208
K RA+LP S IMI Q
Sbjct: 134 KDKRASLPHSRIMIHQ 149
>gi|428774097|ref|YP_007165885.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
gi|428688376|gb|AFZ48236.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
Length = 199
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 66/121 (54%), Gaps = 11/121 (9%)
Query: 91 QPPPD---LASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK 147
QP D + LY+ RI++LG S+ I+A LYL ED KPIYLYINS G
Sbjct: 15 QPYSDWVNIYDRLYRERIIFLGRGVNDSLANQIIAVMLYLDSEDNNKPIYLYINSPG--- 71
Query: 148 GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIK 207
G T AIYD M ++K + T+CVG A A LL AG KG R ALP S IMI
Sbjct: 72 -----GSVTAGMAIYDTMQHIKSEVVTICVGLAASMGAFLLAAGTKGKRLALPHSRIMIH 126
Query: 208 Q 208
Q
Sbjct: 127 Q 127
>gi|428779425|ref|YP_007171211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
gi|428693704|gb|AFZ49854.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
Length = 199
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG + LI+A+ LYL+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDDEIGNLIVAQMLYLEAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ I+D M V+P + T+C+G A A LL AGAKG R +LP S IMI Q
Sbjct: 69 VSAGLGIFDTMNQVRPDVSTICLGLAASMGAFLLSAGAKGKRLSLPHSRIMIHQ 122
>gi|21674371|ref|NP_662436.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
tepidum TLS]
gi|25008303|sp|Q8KC73.1|CLPP_CHLTE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|21647550|gb|AAM72778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
tepidum TLS]
Length = 225
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 11/135 (8%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
S ++ MVI TSG + D+ S L + RI++LG V LI+A+ ++L+ ED E
Sbjct: 26 SQLVPMVIE-TSGRG--ERAFDIFSRLLRERIIFLGSPIDEHVAGLIIAQLIFLESEDPE 82
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
+ IY+YINS G G + IYD M Y++P I T+CVG A A LL +G
Sbjct: 83 RDIYIYINSPG--------GSVSAGLGIYDTMQYIRPDISTVCVGMAASMGAFLLASGTS 134
Query: 194 GNRAALPSSTIMIKQ 208
G RA+LP S IMI Q
Sbjct: 135 GKRASLPHSRIMIHQ 149
>gi|268317954|ref|YP_003291673.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodothermus
marinus DSM 4252]
gi|262335488|gb|ACY49285.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodothermus
marinus DSM 4252]
Length = 252
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 69/120 (57%), Gaps = 8/120 (6%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV +G + L++A+ L+L ED E+ I +YINS G G
Sbjct: 52 DIFSRLLKERIVIIGTPINDQIANLVVAQLLWLASEDSERDINIYINSPG--------GS 103
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQAGDTGI 214
A+YD M YV PP+ T+CVG A A+LL AG KG RAALP+S IMI Q +G+
Sbjct: 104 IDSGLAVYDTMQYVAPPVATICVGLAASMGAVLLAAGVKGKRAALPNSRIMIHQPWMSGV 163
>gi|157124223|ref|XP_001660372.1| endopeptidase clp, putative [Aedes aegypti]
gi|108882807|gb|EAT47032.1| AAEL001797-PA [Aedes aegypti]
Length = 225
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L ++ LI+A+ L+LQ E+ KPI++YINS G G
Sbjct: 43 DIFSRLLKERIICLMGPIHDDLSSLIVAQLLFLQSENGTKPIHMYINSPG--------GS 94
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKPP+ T CVG A +LLL AGA G R +LP++ IMI Q
Sbjct: 95 VTAGLAIYDTMQYVKPPVATWCVGQACSMGSLLLAAGAPGMRHSLPNARIMIHQ 148
>gi|434398580|ref|YP_007132584.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
gi|428269677|gb|AFZ35618.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
Length = 200
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVDDDIANLIVAQLLFLEAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ ++D M ++P + T+C+G A A LL AGAKG R +LP+S IMI Q
Sbjct: 69 VSAGMGMFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQ 122
>gi|357040211|ref|ZP_09102000.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
gibsoniae DSM 7213]
gi|355356875|gb|EHG04656.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
gibsoniae DSM 7213]
Length = 197
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++G +V+ L++A+ L+L+ ED EK I +YINS G G
Sbjct: 20 DIYSRLLKDRIVFIGGPIDDTVSNLVIAQLLFLEAEDPEKDINIYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKP + T+C+G A + LL AGA G R ALP + IMI Q
Sbjct: 72 VTAGMAIYDTMQYVKPDVSTICLGQAASMGSFLLAAGAPGKRFALPYARIMIHQ 125
>gi|423551473|ref|ZP_17527800.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
ISP3191]
gi|401187311|gb|EJQ94384.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
ISP3191]
Length = 193
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIVIIGSEINNQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|226227816|ref|YP_002761922.1| ATP-dependent Clp protease proteolytic subunit [Gemmatimonas
aurantiaca T-27]
gi|226091007|dbj|BAH39452.1| ATP-dependent Clp protease proteolytic subunit [Gemmatimonas
aurantiaca T-27]
Length = 204
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 70/119 (58%), Gaps = 8/119 (6%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L +RI++LG V +I+A+ L+L ++ EKPI+LYINS G G
Sbjct: 21 DIFSRLLMDRIIFLGSPINDDVANIIIAQMLFLDADNPEKPIHLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQAGDTG 213
+ A+YD M ++K P++T C+G A A LL AGA G+RAALP S IMI Q G
Sbjct: 73 VSAGLAMYDTMQFIKAPVYTTCMGMAASMGAFLLCAGAPGHRAALPHSRIMIHQPSQNG 131
>gi|229079979|ref|ZP_04212510.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-2]
gi|229179074|ref|ZP_04306431.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
172560W]
gi|423413446|ref|ZP_17390566.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG3O-2]
gi|423430769|ref|ZP_17407773.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG4O-1]
gi|423436292|ref|ZP_17413273.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG4X12-1]
gi|228604442|gb|EEK61906.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
172560W]
gi|228703358|gb|EEL55813.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-2]
gi|401101544|gb|EJQ09533.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG3O-2]
gi|401118846|gb|EJQ26674.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG4O-1]
gi|401122906|gb|EJQ30690.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG4X12-1]
Length = 193
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|118791462|ref|XP_319765.3| AGAP009019-PA [Anopheles gambiae str. PEST]
gi|116117612|gb|EAA14822.3| AGAP009019-PA [Anopheles gambiae str. PEST]
Length = 225
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L ++ LI+A+ L+LQ E+ KPI++YINS G G
Sbjct: 43 DIFSRLLKERIICLMGPIHDDLSSLIVAQLLFLQSENGTKPIHMYINSPG--------GS 94
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKPP+ T CVG A +LLL AGA G R +LP++ IMI Q
Sbjct: 95 VTAGLAIYDTMQYVKPPVATWCVGQACSMGSLLLAAGAPGMRHSLPNARIMIHQ 148
>gi|222096291|ref|YP_002530348.1| ATP-dependent clp protease, proteolytic subunit clpp [Bacillus
cereus Q1]
gi|221240349|gb|ACM13059.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus Q1]
Length = 193
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M ++P + TLC+G A ALLL AGAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIRPDVQTLCMGLAASFGALLLLAGAKGKRFALPNSEIMIHQ 124
>gi|47569052|ref|ZP_00239742.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9241]
gi|52142722|ref|YP_084107.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus
E33L]
gi|217960230|ref|YP_002338790.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH187]
gi|228985882|ref|ZP_04146030.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|375284743|ref|YP_005105182.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NC7401]
gi|423352537|ref|ZP_17330164.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
IS075]
gi|423372675|ref|ZP_17350015.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
AND1407]
gi|423568352|ref|ZP_17544599.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
MSX-A12]
gi|67460465|sp|Q63AG0.1|CLPP1_BACCZ RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|47554321|gb|EAL12682.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9241]
gi|51976191|gb|AAU17741.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus
E33L]
gi|217063351|gb|ACJ77601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH187]
gi|228773811|gb|EEM22229.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|358353270|dbj|BAL18442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NC7401]
gi|401091636|gb|EJP99776.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
IS075]
gi|401099112|gb|EJQ07122.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
AND1407]
gi|401210640|gb|EJR17391.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
MSX-A12]
Length = 193
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|423642205|ref|ZP_17617823.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD166]
gi|401277148|gb|EJR83092.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD166]
Length = 193
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|345304234|ref|YP_004826136.1| ATP-dependent Clp protease proteolytic subunit [Rhodothermus
marinus SG0.5JP17-172]
gi|345113467|gb|AEN74299.1| ATP-dependent Clp protease proteolytic subunit [Rhodothermus
marinus SG0.5JP17-172]
Length = 250
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 69/120 (57%), Gaps = 8/120 (6%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV +G + L++A+ L+L ED E+ I +YINS G G
Sbjct: 52 DIFSRLLKERIVIIGTPINDQIANLVVAQLLWLASEDSERDINIYINSPG--------GS 103
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQAGDTGI 214
A+YD M YV PP+ T+CVG A A+LL AG KG RAALP+S IMI Q +G+
Sbjct: 104 IDSGLAVYDTMQYVAPPVATICVGLAASMGAVLLAAGVKGKRAALPNSRIMIHQPWMSGV 163
>gi|206971861|ref|ZP_03232810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH1134]
gi|365161174|ref|ZP_09357323.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus sp.
7_6_55CFAA_CT2]
gi|423424913|ref|ZP_17401944.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG3X2-2]
gi|423506500|ref|ZP_17483090.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HD73]
gi|423581066|ref|ZP_17557177.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD014]
gi|423636486|ref|ZP_17612139.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD156]
gi|449089852|ref|YP_007422293.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. HD73]
gi|206733246|gb|EDZ50419.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH1134]
gi|363621401|gb|EHL72612.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus sp.
7_6_55CFAA_CT2]
gi|401113685|gb|EJQ21554.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG3X2-2]
gi|401215831|gb|EJR22546.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD014]
gi|401274837|gb|EJR80806.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD156]
gi|402447941|gb|EJV79790.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HD73]
gi|449023609|gb|AGE78772.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. HD73]
Length = 193
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|65320084|ref|ZP_00393043.1| COG0740: Protease subunit of ATP-dependent Clp proteases [Bacillus
anthracis str. A2012]
Length = 186
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|428297818|ref|YP_007136124.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
gi|428234362|gb|AFZ00152.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
Length = 201
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG + +V LI+A+ LYL ED EK IY+YINS G G
Sbjct: 17 DIYSRLLRERILFLGQAIDSNVANLIVAQLLYLDSEDSEKDIYMYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P + T+C G A A LL AG KG R +LP S IMI Q
Sbjct: 69 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQ 122
>gi|384186850|ref|YP_005572746.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar chinensis CT-43]
gi|410675156|ref|YP_006927527.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus
thuringiensis Bt407]
gi|423384335|ref|ZP_17361591.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG1X1-2]
gi|423529293|ref|ZP_17505738.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuB1-1]
gi|452199211|ref|YP_007479292.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|17981474|gb|AAL51031.1|AF454758_1 ClpP2 [Bacillus thuringiensis]
gi|326940559|gb|AEA16455.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar chinensis CT-43]
gi|401640236|gb|EJS57968.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG1X1-2]
gi|402448722|gb|EJV80561.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
HuB1-1]
gi|409174285|gb|AFV18590.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus
thuringiensis Bt407]
gi|452104604|gb|AGG01544.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 193
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|423627861|ref|ZP_17603610.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD154]
gi|401271158|gb|EJR77176.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
VD154]
Length = 193
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|338729930|ref|YP_004659322.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
thermarum DSM 5069]
gi|335364281|gb|AEH50226.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
thermarum DSM 5069]
Length = 202
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 25 DIYSRLLKDRIVFLGYPIDDHTANLVVAQLLFLEAEDPDKDIHLYINSPG--------GS 76
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVK + T+C+G A AA+LL +G KG R ALP++ IM+ Q
Sbjct: 77 VTAGLAIYDTMQYVKCDVVTICIGQAASMAAVLLASGTKGKRYALPNARIMLHQ 130
>gi|238898003|ref|YP_002923683.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|259585958|sp|C4K4P2.1|CLPP_HAMD5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|229465761|gb|ACQ67535.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 215
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 8/143 (5%)
Query: 66 SFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFL 125
SF + R P +T+V T+ + D+ S + K R+++L + LI+A+ L
Sbjct: 3 SFDEQNTRLPSMTLVPMVVEQTSRGERAYDIYSRMLKERVIFLTGQVEEHMANLIVAQML 62
Query: 126 YLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAA 185
+L+ E+ EK IYLYINS G G T +IYD M ++ P + T+C+G A A
Sbjct: 63 FLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFITPDVSTICIGQACSMGA 114
Query: 186 LLLGAGAKGNRAALPSSTIMIKQ 208
LL AGAK R LP++ +MI Q
Sbjct: 115 FLLAAGAKSKRYCLPNARVMIHQ 137
>gi|228959022|ref|ZP_04120723.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228800683|gb|EEM47599.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 198
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 76 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 129
>gi|229151000|ref|ZP_04279211.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1550]
gi|228632560|gb|EEK89178.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1550]
Length = 198
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 76 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 129
>gi|444911057|ref|ZP_21231233.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
gi|444718395|gb|ELW59208.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
Length = 201
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
DL S L K+RIV LG V +I+A+ L+L+ ED +K I LYINS G G
Sbjct: 18 DLYSRLLKDRIVMLGTPVNDDVANIIVAQLLFLESEDPDKGISLYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVK P+ T+C+G A ALLL AG+ G R ALP+S IMI Q
Sbjct: 70 VTAGLAIYDTMQYVKCPVSTICIGQAASMGALLLLAGSPGKRYALPNSRIMIHQ 123
>gi|428771384|ref|YP_007163174.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
gi|428685663|gb|AFZ55130.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
Length = 199
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 62/109 (56%), Gaps = 8/109 (7%)
Query: 100 LYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAF 159
LY+ RI++LG S+ I+A LYL ED KPIYLYINS G G T
Sbjct: 27 LYRERIIFLGRGVNDSLANQIIAVMLYLDSEDNSKPIYLYINSPG--------GSVTAGL 78
Query: 160 AIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
AIYD M ++K + T+CVG A A LL AG KG R ALP S IMI Q
Sbjct: 79 AIYDTMQHIKSEVVTICVGLAASMGAFLLSAGTKGKRLALPHSRIMIHQ 127
>gi|339007073|ref|ZP_08639648.1| ATP-dependent Clp protease proteolytic subunit 1 [Brevibacillus
laterosporus LMG 15441]
gi|338776282|gb|EGP35810.1| ATP-dependent Clp protease proteolytic subunit 1 [Brevibacillus
laterosporus LMG 15441]
Length = 195
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V ++A+ L+LQ ED +K I +YINS G G
Sbjct: 21 DIYSRLLKDRIIFLGTPINDQVANSVVAQLLFLQAEDPDKDISIYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG A + LL AGAKG R ALP+S IMI Q
Sbjct: 73 ITAGMAIYDTMQYIKPDVSTICVGLAASMGSFLLCAGAKGKRYALPNSEIMIHQ 126
>gi|228953123|ref|ZP_04115182.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|229190887|ref|ZP_04317878.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
gi|228592555|gb|EEK50383.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
gi|228806538|gb|EEM53098.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 198
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 76 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 129
>gi|440682480|ref|YP_007157275.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
gi|428679599|gb|AFZ58365.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
Length = 201
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG S+ LI+A+ L+L ED EK IY+YINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P + T+C G A A LL AGAKG R +LP S IMI Q
Sbjct: 69 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
>gi|395225605|ref|ZP_10404124.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiovulum sp.
ES]
gi|394446228|gb|EJF07066.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiovulum sp.
ES]
Length = 197
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV L +V I+A+ L+L+ ED EK IY YINS G G
Sbjct: 19 DIYSRLLKDRIVMLSGEVNDAVASSIVAQLLFLEAEDPEKDIYFYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T +IYD M Y+KP + T+C+G A A LL AG KG R ALP++ IMI Q
Sbjct: 71 ITSGMSIYDTMNYIKPQVSTICIGQAASMGAFLLSAGEKGKRYALPNARIMIHQ 124
>gi|419653338|ref|ZP_14184315.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-872]
gi|419665004|ref|ZP_14195081.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-7]
gi|419680613|ref|ZP_14209470.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 140-16]
gi|419686706|ref|ZP_14215132.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1798]
gi|380632716|gb|EIB50772.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-872]
gi|380644245|gb|EIB61437.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-7]
gi|380659993|gb|EIB75950.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 140-16]
gi|380663762|gb|EIB79387.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1798]
Length = 194
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M IP+ ++ + D+ S L K+RI+ L + I+A+ L+L+ ED K IY
Sbjct: 1 MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T F+IYD M Y+KP + T+C+G A A LL GA+G R
Sbjct: 61 LYINSPG--------GIITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 113 ALPNSRIMIHQ 123
>gi|421872665|ref|ZP_16304283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
gi|372458638|emb|CCF13832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
Length = 193
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V ++A+ L+LQ ED +K I +YINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTPINDQVANSVVAQLLFLQAEDPDKDISIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG A + LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTMQYIKPDVSTICVGLAASMGSFLLCAGAKGKRYALPNSEIMIHQ 124
>gi|283955633|ref|ZP_06373126.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 1336]
gi|419640996|ref|ZP_14172909.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23357]
gi|283792858|gb|EFC31634.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 1336]
gi|380618530|gb|EIB37656.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23357]
Length = 194
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M IP+ ++ + D+ S L K+RI+ L + I+A+ L+L+ ED K IY
Sbjct: 1 MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T F+IYD M Y+KP + T+C+G A A LL GA+G R
Sbjct: 61 LYINSPG--------GVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 113 ALPNSRIMIHQ 123
>gi|121612255|ref|YP_999911.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 81-176]
gi|167004871|ref|ZP_02270629.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 81-176]
gi|419618248|ref|ZP_14151797.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 129-258]
gi|419647506|ref|ZP_14178865.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 9217]
gi|166201812|sp|A1VXS0.1|CLPP_CAMJJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|87250345|gb|EAQ73303.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 81-176]
gi|380595178|gb|EIB15930.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 129-258]
gi|380627475|gb|EIB45866.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 9217]
Length = 194
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M IP+ ++ + D+ S L K+RI+ L + I+A+ L+L+ ED K IY
Sbjct: 1 MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T F+IYD M Y+KP + T+C+G A A LL GA+G R
Sbjct: 61 LYINSPG--------GVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 113 ALPNSRIMIHQ 123
>gi|228939909|ref|ZP_04102486.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228972800|ref|ZP_04133399.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228979383|ref|ZP_04139719.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis Bt407]
gi|228780387|gb|EEM28618.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis Bt407]
gi|228787015|gb|EEM34995.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228819840|gb|EEM65888.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar berliner ATCC 10792]
Length = 198
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 76 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 129
>gi|57237197|ref|YP_178209.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni RM1221]
gi|86149593|ref|ZP_01067823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni CF93-6]
gi|86151504|ref|ZP_01069719.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 260.94]
gi|86153638|ref|ZP_01071841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni HB93-13]
gi|88597431|ref|ZP_01100666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 84-25]
gi|148926357|ref|ZP_01810041.1| ATP-dependent clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni CG8486]
gi|153951283|ref|YP_001397440.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. doylei 269.97]
gi|157414501|ref|YP_001481757.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 81116]
gi|205356561|ref|ZP_03223324.1| ATP-dependent CLp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni CG8421]
gi|218561871|ref|YP_002343650.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni NCTC 11168 = ATCC 700819]
gi|315123791|ref|YP_004065795.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni ICDCCJ07001]
gi|317510277|ref|ZP_07967722.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 305]
gi|384440860|ref|YP_005657163.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni M1]
gi|384442542|ref|YP_005658794.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni S3]
gi|384447501|ref|YP_005655552.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni IA3902]
gi|403054994|ref|YP_006632399.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni NCTC 11168-BN148]
gi|407941656|ref|YP_006857296.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni PT14]
gi|415730267|ref|ZP_11472938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni DFVF1099]
gi|415745982|ref|ZP_11475227.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 327]
gi|419563790|ref|ZP_14101183.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1098]
gi|419568884|ref|ZP_14106012.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1417]
gi|419569464|ref|ZP_14106524.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
7--1]
gi|419572536|ref|ZP_14109446.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
132-6]
gi|419575578|ref|ZP_14112264.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1909]
gi|419577012|ref|ZP_14113576.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
59-2]
gi|419579930|ref|ZP_14116318.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1948]
gi|419580982|ref|ZP_14117296.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1957]
gi|419583282|ref|ZP_14119466.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1961]
gi|419591402|ref|ZP_14126754.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
37/05]
gi|419606137|ref|ZP_14140517.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 9860]
gi|419619337|ref|ZP_14152807.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 51494]
gi|419621796|ref|ZP_14155044.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23216]
gi|419623700|ref|ZP_14156824.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23218]
gi|419626351|ref|ZP_14159342.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23223]
gi|419626939|ref|ZP_14159856.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23263]
gi|419629936|ref|ZP_14162647.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 60004]
gi|419630868|ref|ZP_14163469.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23264]
gi|419633160|ref|ZP_14165601.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23269]
gi|419635248|ref|ZP_14167562.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 55037]
gi|419636579|ref|ZP_14168772.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 9879]
gi|419638601|ref|ZP_14170659.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 86605]
gi|419642138|ref|ZP_14173946.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni ATCC 33560]
gi|419644077|ref|ZP_14175666.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 9081]
gi|419646616|ref|ZP_14178078.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 53161]
gi|419650750|ref|ZP_14181960.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-1025]
gi|419655723|ref|ZP_14186565.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-988]
gi|419657396|ref|ZP_14188052.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-1]
gi|419658905|ref|ZP_14189452.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-979]
gi|419661493|ref|ZP_14191818.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-831]
gi|419663222|ref|ZP_14193423.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-4]
gi|419667352|ref|ZP_14197328.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-10]
gi|419668949|ref|ZP_14198749.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-11]
gi|419671720|ref|ZP_14201363.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-14]
gi|419673423|ref|ZP_14202890.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 51037]
gi|419674808|ref|ZP_14204092.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 110-21]
gi|419676717|ref|ZP_14205883.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 87330]
gi|419678176|ref|ZP_14207241.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 87459]
gi|419683631|ref|ZP_14212318.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1213]
gi|419684581|ref|ZP_14213174.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1577]
gi|419688663|ref|ZP_14216983.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1854]
gi|419690688|ref|ZP_14218883.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1893]
gi|419691911|ref|ZP_14220017.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1928]
gi|419694287|ref|ZP_14222256.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 9872]
gi|419695810|ref|ZP_14223691.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23210]
gi|419697690|ref|ZP_14225419.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23211]
gi|424845752|ref|ZP_18270355.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni NW]
gi|424848862|ref|ZP_18273336.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni D2600]
gi|9297087|sp|P54413.2|CLPP_CAMJE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460171|sp|Q5HWX6.1|CLPP_CAMJR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201811|sp|A7H1R0.1|CLPP_CAMJD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|172047014|sp|A8FJZ3.1|CLPP_CAMJ8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|57166001|gb|AAW34780.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni RM1221]
gi|85839861|gb|EAQ57120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni CF93-6]
gi|85841851|gb|EAQ59098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 260.94]
gi|85842599|gb|EAQ59811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni HB93-13]
gi|88190492|gb|EAQ94466.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 84-25]
gi|112359577|emb|CAL34361.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni NCTC 11168 = ATCC 700819]
gi|145844749|gb|EDK21854.1| ATP-dependent clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni CG8486]
gi|152938729|gb|ABS43470.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. doylei 269.97]
gi|157385465|gb|ABV51780.1| ATP-dependent clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 81116]
gi|205345566|gb|EDZ32206.1| ATP-dependent CLp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni CG8421]
gi|284925484|gb|ADC27836.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni IA3902]
gi|307747143|gb|ADN90413.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni M1]
gi|315017513|gb|ADT65606.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni ICDCCJ07001]
gi|315057629|gb|ADT71958.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni S3]
gi|315928124|gb|EFV07442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni DFVF1099]
gi|315930200|gb|EFV09315.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 305]
gi|315931999|gb|EFV10952.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 327]
gi|356486652|gb|EHI16634.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni NW]
gi|356487884|gb|EHI17823.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni D2600]
gi|380543470|gb|EIA67664.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1098]
gi|380544729|gb|EIA68740.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1417]
gi|380549100|gb|EIA72979.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
7--1]
gi|380550716|gb|EIA74355.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
132-6]
gi|380553342|gb|EIA76863.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1909]
gi|380555831|gb|EIA79117.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1948]
gi|380558340|gb|EIA81520.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
59-2]
gi|380560066|gb|EIA83172.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1957]
gi|380563488|gb|EIA86324.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1961]
gi|380568463|gb|EIA90933.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
37/05]
gi|380587341|gb|EIB08547.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 9860]
gi|380600394|gb|EIB20732.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23218]
gi|380601202|gb|EIB21520.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23216]
gi|380602790|gb|EIB23032.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 51494]
gi|380603405|gb|EIB23506.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23223]
gi|380606751|gb|EIB26644.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 60004]
gi|380607631|gb|EIB27487.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23263]
gi|380612096|gb|EIB31633.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23264]
gi|380612873|gb|EIB32388.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23269]
gi|380613199|gb|EIB32695.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 55037]
gi|380617177|gb|EIB36356.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 9879]
gi|380618442|gb|EIB37572.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 86605]
gi|380622727|gb|EIB41467.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 9081]
gi|380623217|gb|EIB41932.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 53161]
gi|380625258|gb|EIB43855.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni ATCC 33560]
gi|380628053|gb|EIB46393.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-1025]
gi|380634880|gb|EIB52724.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-1]
gi|380636568|gb|EIB54261.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-988]
gi|380639981|gb|EIB57447.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-831]
gi|380640814|gb|EIB58255.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-979]
gi|380643402|gb|EIB60631.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-4]
gi|380646201|gb|EIB63182.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-10]
gi|380648124|gb|EIB64996.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-11]
gi|380648985|gb|EIB65769.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-14]
gi|380652690|gb|EIB69159.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 110-21]
gi|380653659|gb|EIB70063.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 51037]
gi|380655800|gb|EIB72099.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 87330]
gi|380658172|gb|EIB74204.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1213]
gi|380661270|gb|EIB77176.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 87459]
gi|380665179|gb|EIB80757.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1854]
gi|380666847|gb|EIB82354.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1577]
gi|380668350|gb|EIB83708.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1893]
gi|380671074|gb|EIB86309.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 9872]
gi|380671279|gb|EIB86501.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1928]
gi|380676613|gb|EIB91493.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23210]
gi|380677344|gb|EIB92213.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23211]
gi|401780646|emb|CCK66338.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni NCTC 11168-BN148]
gi|407905494|gb|AFU42323.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni PT14]
Length = 194
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M IP+ ++ + D+ S L K+RI+ L + I+A+ L+L+ ED K IY
Sbjct: 1 MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T F+IYD M Y+KP + T+C+G A A LL GA+G R
Sbjct: 61 LYINSPG--------GVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 113 ALPNSRIMIHQ 123
>gi|57168633|ref|ZP_00367765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
coli RM2228]
gi|305432739|ref|ZP_07401899.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
JV20]
gi|419535913|ref|ZP_14075402.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
111-3]
gi|419543274|ref|ZP_14082351.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2548]
gi|419547562|ref|ZP_14086272.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2680]
gi|419551004|ref|ZP_14089478.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2688]
gi|419558999|ref|ZP_14096828.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
80352]
gi|419609035|ref|ZP_14143208.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H6]
gi|419613016|ref|ZP_14146876.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H9]
gi|57019914|gb|EAL56594.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
coli RM2228]
gi|304444248|gb|EFM36901.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
JV20]
gi|380519528|gb|EIA45602.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
111-3]
gi|380520408|gb|EIA46247.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2680]
gi|380520569|gb|EIA46381.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2548]
gi|380529297|gb|EIA54468.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2688]
gi|380538325|gb|EIA62814.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
80352]
gi|380584611|gb|EIB06026.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H6]
gi|380588883|gb|EIB09977.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H9]
Length = 194
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M IP+ ++ + D+ S L K+RI+ L + I+A+ L+L+ ED K IY
Sbjct: 1 MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T F+IYD M Y+KP + T+C+G A A LL GA+G R
Sbjct: 61 LYINSPG--------GVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 113 ALPNSRIMIHQ 123
>gi|229070268|ref|ZP_04203518.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F65185]
gi|228712832|gb|EEL64757.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F65185]
Length = 198
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|78357263|ref|YP_388712.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
alaskensis G20]
gi|90101407|sp|Q30Z79.1|CLPP_DESDG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78219668|gb|ABB39017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
alaskensis G20]
Length = 200
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 77 ITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
I MVI T + D+ S L K+RI+ LG +V LI A+ L+L+ E+ EK I
Sbjct: 3 IPMVI---ESTGRAERAYDIYSRLLKDRIILLGTPVDDNVASLICAQLLFLESENPEKEI 59
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
YLYINS G G T AIYD M Y+ P+ TLC+G A A LL AG G R
Sbjct: 60 YLYINSPG--------GVVTAGLAIYDTMQYISAPVATLCMGQAASMGAFLLAAGQPGMR 111
Query: 197 AALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 112 FALPNSRIMIHQ 123
>gi|149923964|ref|ZP_01912350.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Plesiocystis
pacifica SIR-1]
gi|149815196|gb|EDM74745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Plesiocystis
pacifica SIR-1]
Length = 217
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 74/136 (54%), Gaps = 9/136 (6%)
Query: 74 SPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
P ++M IPF T + D+ S L K+RIV+LG V +I+A+ L+L+ ED
Sbjct: 6 QPPLSMNIPFVVEQTHRGERSWDIYSRLLKDRIVFLGDPINDRVASIIIAQLLFLESEDP 65
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
+K I LYINS G G T IYD M YV+ + T C+G A A LL GA
Sbjct: 66 DKDIRLYINSPG--------GVVTAGLGIYDTMQYVRCDVATYCLGQAASMGAFLLAGGA 117
Query: 193 KGNRAALPSSTIMIKQ 208
KG R ALP++ IMI Q
Sbjct: 118 KGKRFALPNARIMIHQ 133
>gi|170078453|ref|YP_001735091.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7002]
gi|169886122|gb|ACA99835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7002]
Length = 198
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + LI+A+ L+L+ +D EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGTQVNDEIANLIVAQLLFLEADDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ I+D M V+P + T+C+G A A LL AGAKG R +LP+S IMI Q
Sbjct: 69 VSAGMGIFDTMNQVRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQ 122
>gi|283955378|ref|ZP_06372877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 414]
gi|283793138|gb|EFC31908.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 414]
Length = 194
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M IP+ ++ + D+ S L K+RI+ L + I+A+ L+L+ ED K IY
Sbjct: 1 MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELASSIVAQLLFLEAEDPAKDIY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T F+IYD M Y+KP + T+C+G A A LL GA+G R
Sbjct: 61 LYINSPG--------GVITSGFSIYDTMNYIKPNVCTICIGQAASMGAFLLSCGAEGKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 113 ALPNSRIMIHQ 123
>gi|365969260|ref|YP_004950821.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae EcWSU1]
gi|365748173|gb|AEW72400.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae EcWSU1]
Length = 233
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 34 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 87
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 88 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 139
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 140 AFLLTAGAKGKRFCLPNSRVMIHQ 163
>gi|229156366|ref|ZP_04284461.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 4342]
gi|228627089|gb|EEK83821.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 4342]
Length = 198
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 76 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 129
>gi|226533042|ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|194700894|gb|ACF84531.1| unknown [Zea mays]
gi|195610476|gb|ACG27068.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|413918966|gb|AFW58898.1| ATP-dependent Clp protease proteolytic subunit isoform 1 [Zea mays]
gi|413918967|gb|AFW58899.1| ATP-dependent Clp protease proteolytic subunit isoform 2 [Zea mays]
Length = 260
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 74/133 (55%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ MVI TS D+ S L K RIV + L++A+ L+L+ E+ KP
Sbjct: 37 LVPMVIEHTSRGERAY---DIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKP 93
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
++LYINS G G T AIYD M Y++ P+ TLC+G A A+LLL AGA G
Sbjct: 94 VHLYINSPG--------GVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGE 145
Query: 196 RAALPSSTIMIKQ 208
R ALP++ +MI Q
Sbjct: 146 RRALPNARVMIHQ 158
>gi|306820816|ref|ZP_07454440.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|402310280|ref|ZP_10829246.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacterium sp. AS15]
gi|304551134|gb|EFM39101.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|400368732|gb|EJP21739.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacterium sp. AS15]
Length = 195
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 72/129 (55%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ T+ + D+ S L K RI++LG LI+A+ L+L+ ED +K I+ Y
Sbjct: 4 IPYVIEQTSRGERSYDIYSRLLKERIIFLGDEVNDQTASLIVAQLLFLESEDPDKDIHFY 63
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T AIYD M ++KP + T+CVG A A LL +G KG R AL
Sbjct: 64 INSPG--------GSITAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLSSGKKGKRYAL 115
Query: 200 PSSTIMIKQ 208
P+S IMI Q
Sbjct: 116 PNSEIMIHQ 124
>gi|228921458|ref|ZP_04084781.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228838231|gb|EEM83549.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 198
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 76 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 129
>gi|56421597|ref|YP_148915.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus
kaustophilus HTA426]
gi|261420500|ref|YP_003254182.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus sp.
Y412MC61]
gi|319768169|ref|YP_004133670.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacillus
sp. Y412MC52]
gi|375010197|ref|YP_004983830.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|448239320|ref|YP_007403378.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus sp.
GHH01]
gi|67460172|sp|Q5KVD9.1|CLPP_GEOKA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56381439|dbj|BAD77347.1| ATP-dependent Clp protease proteolytic subunit (class III
heat-shock protein) [Geobacillus kaustophilus HTA426]
gi|261376957|gb|ACX79700.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. Y412MC61]
gi|317113035|gb|ADU95527.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. Y412MC52]
gi|359289046|gb|AEV20730.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|445208162|gb|AGE23627.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus sp.
GHH01]
Length = 196
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG V I+++ L+L ED +K I LYINS G G
Sbjct: 19 DIYSRLLKDRIVFLGSPIDDQVANSIVSQLLFLAAEDPDKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQ 124
>gi|357629245|gb|EHJ78139.1| hypothetical protein KGM_01435 [Danaus plexippus]
Length = 211
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI+ L ++ L++A+ L+LQ E +KP++LYINS G G
Sbjct: 17 DIYSRLLRERIICLMGPINDEISSLVVAQLLFLQSESSKKPVHLYINSPG--------GN 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T IYD M Y+ PP+ T CVG A A+LLL AGA G R ALP+S IMI Q
Sbjct: 69 VTAGLGIYDTMQYITPPVATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQ 122
>gi|430751620|ref|YP_007214528.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
gi|430735585|gb|AGA59530.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
Length = 195
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V ++A+ L+L +D EK I+LYINS G G
Sbjct: 21 DIYSRLLKDRIIFLGTPINDVVANSVIAQMLFLAADDPEKDIHLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG A A LL AGA G R ALP+S +MI Q
Sbjct: 73 ITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAPGKRYALPNSEVMIHQ 126
>gi|428202443|ref|YP_007081032.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
gi|427979875|gb|AFY77475.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
Length = 204
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG L++A+ L+L+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVTDESANLVVAQLLFLEAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ I+D M ++P + T+C+G A A LL AGAKG R +LP+S IMI Q
Sbjct: 69 VSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQ 122
>gi|229046487|ref|ZP_04192142.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH676]
gi|228724849|gb|EEL76151.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH676]
Length = 198
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 76 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 129
>gi|227113465|ref|ZP_03827121.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
gi|253687443|ref|YP_003016633.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|403057519|ref|YP_006645736.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
carotovorum subsp. carotovorum PCC21]
gi|251754021|gb|ACT12097.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|402804845|gb|AFR02483.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 207
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
+ P ++ MV+ TS + D+ S L K RI++L + L++A+ L+L+
Sbjct: 9 RQAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLVVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
AGAKG R LP+S +MI Q
Sbjct: 118 TAGAKGKRICLPNSRVMIHQ 137
>gi|444352821|ref|YP_007388965.1| ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
[Enterobacter aerogenes EA1509E]
gi|443903651|emb|CCG31425.1| ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
[Enterobacter aerogenes EA1509E]
Length = 220
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 21 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 74
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 75 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 126
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 127 AFLLTAGAKGKRFCLPNSRVMIHQ 150
>gi|261822507|ref|YP_003260613.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
wasabiae WPP163]
gi|261606520|gb|ACX89006.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pectobacterium wasabiae WPP163]
gi|385872815|gb|AFI91335.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium sp.
SCC3193]
Length = 207
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
+ P ++ MV+ TS + D+ S L K RI++L + L++A+ L+L+
Sbjct: 9 RQAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLVVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
AGAKG R LP+S +MI Q
Sbjct: 118 TAGAKGKRICLPNSRVMIHQ 137
>gi|138896648|ref|YP_001127101.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus
thermodenitrificans NG80-2]
gi|196249350|ref|ZP_03148048.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. G11MC16]
gi|166201825|sp|A4ISQ2.1|CLPP_GEOTN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134268161|gb|ABO68356.1| ATP-dependent Clp protease [Geobacillus thermodenitrificans NG80-2]
gi|196211107|gb|EDY05868.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. G11MC16]
Length = 196
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V I+++ L+L ED EK I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AGAKG R ALP+S +MI Q
Sbjct: 71 ITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQ 124
>gi|46579746|ref|YP_010554.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
vulgaris str. Hildenborough]
gi|120602778|ref|YP_967178.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
vulgaris DP4]
gi|387153092|ref|YP_005702028.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
vulgaris RCH1]
gi|60389677|sp|Q72CE8.1|CLPP_DESVH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201819|sp|A1VE85.1|CLPP_DESVV RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|46449161|gb|AAS95813.1| ATP-dependent Clp protease, proteolytic subunit [Desulfovibrio
vulgaris str. Hildenborough]
gi|120563007|gb|ABM28751.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfovibrio
vulgaris DP4]
gi|311233536|gb|ADP86390.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
vulgaris RCH1]
Length = 201
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V LI A+ L+L+ E+ EK I++YINS G G
Sbjct: 18 DIYSRLLKDRIVLLGTPIDDQVASLICAQLLFLESENPEKEIHMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+ P+ TLC+G A ALLL AGA G R +LP S IMI Q
Sbjct: 70 VTAGMAIYDTMQYINSPVSTLCMGQAASMGALLLAAGAPGLRFSLPHSRIMIHQ 123
>gi|157737934|ref|YP_001490618.1| ATP-dependent Clp protease proteolytic subunit [Arcobacter butzleri
RM4018]
gi|315637681|ref|ZP_07892886.1| ATP-dependent Clp protease proteolytic subunit [Arcobacter butzleri
JV22]
gi|384156267|ref|YP_005539082.1| ATP-dependent Clp protease proteolytic subunit [Arcobacter butzleri
ED-1]
gi|167008646|sp|A8EVH5.1|CLPP_ARCB4 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157699788|gb|ABV67948.1| ATP-dependent Clp protease, proteolytic subunit [Arcobacter
butzleri RM4018]
gi|315478028|gb|EFU68756.1| ATP-dependent Clp protease proteolytic subunit [Arcobacter butzleri
JV22]
gi|345469821|dbj|BAK71272.1| ATP-dependent Clp protease proteolytic subunit [Arcobacter butzleri
ED-1]
Length = 194
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ T + D+ S L K+RI+ L +V ++A+ L+L+ ED +K IYLY
Sbjct: 4 IPYVVEKTGRGERSYDIYSRLLKDRIIMLSGEINDAVASTVVAQLLFLEAEDPDKDIYLY 63
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T +I+D M Y+KP + T+C+G A A LL +GAKG R +L
Sbjct: 64 INSPG--------GVVTSGMSIFDTMNYIKPDVCTICIGQAASMGAFLLSSGAKGKRYSL 115
Query: 200 PSSTIMIKQ 208
P+S IMI Q
Sbjct: 116 PNSRIMIHQ 124
>gi|403745256|ref|ZP_10954194.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
gi|403121484|gb|EJY55777.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
Length = 185
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + V ++A+ L+L +D +K I +YINS G G
Sbjct: 12 DIYSRLLKDRIIFLGTAIDDDVANAVVAQLLFLAADDPDKDIQMYINSPG--------GS 63
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M ++KP + T+CVG A A+LL AGAKG R ALP+S +MI Q
Sbjct: 64 VSAGLAIYDTMQHIKPDVSTMCVGMAASMGAVLLTAGAKGKRFALPNSEVMIHQ 117
>gi|383816700|ref|ZP_09972092.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. M24T3]
gi|383294412|gb|EIC82754.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. M24T3]
Length = 209
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 77/137 (56%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+ E+
Sbjct: 12 PNMALVPMVVEQTS---RGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A + LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R ALP+S +MI Q
Sbjct: 121 AKGKRYALPNSRVMIHQ 137
>gi|169831635|ref|YP_001717617.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Desulforudis audaxviator MP104C]
gi|169638479|gb|ACA59985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Desulforudis audaxviator MP104C]
Length = 198
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 8/131 (6%)
Query: 78 TMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
T+V TA + D+ S L K+RIV++G V LI+A+ L+L+ ED +K I+
Sbjct: 3 TLVPIVVEQTARGERAYDIYSRLLKDRIVFIGGPIEDHVANLIIAQLLFLEAEDPDKDIH 62
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y++P + T+C+G A A LL AG G R
Sbjct: 63 LYINSPG--------GLVTSGMAIYDTMQYIRPDVSTICLGQAASFGAFLLAAGTPGKRF 114
Query: 198 ALPSSTIMIKQ 208
ALP + IM+ Q
Sbjct: 115 ALPYARIMMHQ 125
>gi|392408625|ref|YP_006445232.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfomonile
tiedjei DSM 6799]
gi|390621761|gb|AFM22968.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfomonile
tiedjei DSM 6799]
Length = 197
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 72/131 (54%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T+ + D+ S L K RIV+LG V LI+A+ L+L+ E+ +K I
Sbjct: 1 MLVPIVVEQTSRGERSYDIYSRLLKERIVFLGTGVDDYVANLIIAQLLFLESEEPDKDIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
YINS G G T AIYD M Y+KP I T+C+G A ALLL AG G R
Sbjct: 61 FYINSPG--------GIVTSGLAIYDTMQYIKPDIQTICIGQAASMGALLLAAGTHGKRY 112
Query: 198 ALPSSTIMIKQ 208
ALP + I+I Q
Sbjct: 113 ALPHARILIHQ 123
>gi|365174864|ref|ZP_09362302.1| ATP-dependent Clp protease proteolytic subunit [Synergistes sp.
3_1_syn1]
gi|363613729|gb|EHL65234.1| ATP-dependent Clp protease proteolytic subunit [Synergistes sp.
3_1_syn1]
Length = 194
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + +V L++A+ L+L+ ED +K I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGTAIDDTVANLVVAQMLFLESEDPDKDISLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M Y++P + T+C+G A A+LL AGA G R ALP++ IMI Q
Sbjct: 72 VSAGLAIYDTMQYIRPNVSTICLGMAASMGAVLLTAGADGKRLALPNAKIMIHQ 125
>gi|23099911|ref|NP_693377.1| ATP-dependent Clp protease proteolytic subunit [Oceanobacillus
iheyensis HTE831]
gi|60389793|sp|Q8ENM5.1|CLPP_OCEIH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|22778142|dbj|BAC14412.1| ATP-dependent Clp protease proteolytic subunit [Oceanobacillus
iheyensis HTE831]
Length = 193
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V+ I+A+ L+L+ ED +K I LYINS G G
Sbjct: 19 DIYSRLLKDRIILLGSGIDDNVSNSIVAQLLFLEAEDPDKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTMNFIKPNVSTICIGMAASMGAFLLTAGEKGKRFALPNSEIMIHQ 124
>gi|291288695|ref|YP_003505511.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Denitrovibrio
acetiphilus DSM 12809]
gi|290885855|gb|ADD69555.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Denitrovibrio
acetiphilus DSM 12809]
Length = 195
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + I+A+ L+L+ +D +K I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGSQVESGIANSIVAQMLFLESDDPDKDIHLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
++ AI+D M Y+KP + T+C+G A AA+LL AG KG R A+P++ +MI Q
Sbjct: 72 VSDGLAIFDTMKYIKPDVSTICIGQAASMAAVLLAAGTKGKRYAVPNARVMIHQ 125
>gi|297621812|ref|YP_003709949.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Waddlia
chondrophila WSU 86-1044]
gi|297377113|gb|ADI38943.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Waddlia
chondrophila WSU 86-1044]
gi|337294078|emb|CCB92063.1| ATP-dependent Clp protease proteolytic subunit 2 [Waddlia
chondrophila 2032/99]
Length = 215
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 75 PVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
P ++ + P+ T + D+ S L K+RIV++G V +++A+ L+L+ ED +
Sbjct: 14 PELSSLTPYVIEDTGRGERSMDIFSRLLKDRIVFIGQDIDDHVANIVVAQLLFLRMEDPK 73
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
K + +Y+NS G GY T AIYDV+ ++ P+ T C+G A ALLL AG K
Sbjct: 74 KDVNIYVNSRG--------GYITSGLAIYDVLKWLPCPVSTYCIGQASSMGALLLTAGDK 125
Query: 194 GNRAALPSSTIMIKQ 208
G R ALP+S IMI Q
Sbjct: 126 GKRYALPNSRIMIHQ 140
>gi|152977369|ref|YP_001376886.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
cytotoxicus NVH 391-98]
gi|152026121|gb|ABS23891.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cytotoxicus NVH 391-98]
Length = 193
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ +D EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPNVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQ 124
>gi|427707070|ref|YP_007049447.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
gi|427359575|gb|AFY42297.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
Length = 201
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG ++ LI+A+ L+L ED EK IY+YINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQIDSNLANLIVAQMLFLDAEDPEKDIYMYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P + T+C G A A LL AGAKG R +LP S IMI Q
Sbjct: 69 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
>gi|307722032|ref|YP_003893172.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfurimonas
autotrophica DSM 16294]
gi|306980125|gb|ADN10160.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfurimonas
autotrophica DSM 16294]
Length = 196
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ T + D+ S L K+RIV L +V I+A+FL+L+ ED EK IY Y
Sbjct: 4 IPYVVEKTGRGERSYDIYSRLLKDRIVMLSGEVNDAVASTIVAQFLFLEAEDPEKDIYFY 63
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T AI+D M Y++P + T+C+G A A LL G KG R AL
Sbjct: 64 INSPG--------GVVTAGLAIFDTMNYIRPHVATICIGQAASMGAFLLSCGEKGKRYAL 115
Query: 200 PSSTIMIKQ 208
P + IMI Q
Sbjct: 116 PHARIMIHQ 124
>gi|225164221|ref|ZP_03726495.1| Endopeptidase Clp [Diplosphaera colitermitum TAV2]
gi|224801160|gb|EEG19482.1| Endopeptidase Clp [Diplosphaera colitermitum TAV2]
Length = 222
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 9/141 (6%)
Query: 69 KSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYL 127
++ R +++ +P T + D+ S L K+RI+++G V +++A+ L+L
Sbjct: 9 RTANRHHIVSYYVPIVLENTGRGERSMDIYSRLLKDRIIFIGTPIDDGVANVVIAQLLFL 68
Query: 128 QYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALL 187
Q ED +K I+LYINS G G T AIYD + +++ + T CVG A A +L
Sbjct: 69 QMEDPKKDIHLYINSPG--------GVVTGGMAIYDTINFLQCDVVTYCVGQAASMATVL 120
Query: 188 LGAGAKGNRAALPSSTIMIKQ 208
L AG KG R ALP+S +MI Q
Sbjct: 121 LSAGTKGKRFALPNSRVMIHQ 141
>gi|407789641|ref|ZP_11136741.1| ATP-dependent Clp protease proteolytic subunit [Gallaecimonas
xiamenensis 3-C-1]
gi|407206301|gb|EKE76259.1| ATP-dependent Clp protease proteolytic subunit [Gallaecimonas
xiamenensis 3-C-1]
Length = 203
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 67 FCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLY 126
++ P + ++ MVI TA + D+ S L K R+++L + LI+A+ L+
Sbjct: 4 IAENDPMNALVPMVI---EQTARGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQLLF 60
Query: 127 LQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAAL 186
L+ E+ EK I+LYINS G G T AIYD M ++K + TLC+G A A
Sbjct: 61 LEAENPEKDIHLYINSPG--------GSVTAGMAIYDTMQFIKADVSTLCIGQAASMGAF 112
Query: 187 LLGAGAKGNRAALPSSTIMIKQ 208
LL GAKG R LP++ +MI Q
Sbjct: 113 LLAGGAKGKRHCLPNARVMIHQ 134
>gi|332707230|ref|ZP_08427283.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332353964|gb|EGJ33451.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 200
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + L++A+ L+L+ +D EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVDSDLANLVVAQLLFLEADDQEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M V P + T+CVG A A LL AGAKG R +LP S IMI Q
Sbjct: 69 VTAGMGIFDTMNQVAPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
>gi|319955770|ref|YP_004167033.1| ATP-dependent clp protease proteolytic subunit clpp [Nitratifractor
salsuginis DSM 16511]
gi|319418174|gb|ADV45284.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitratifractor
salsuginis DSM 16511]
Length = 196
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 72/129 (55%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ T + D+ S L K+RI+ L +V I+A+ L+L+ +D +K IY Y
Sbjct: 4 IPYVIEQTGRGERSYDIYSRLLKDRIIMLSGEVNDAVASSIVAQLLFLEAQDPDKDIYFY 63
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T F+IYD M Y+KP + T+C+G A A LL GA+G R AL
Sbjct: 64 INSPG--------GVITSGFSIYDTMNYIKPDVSTICIGQAASMGAFLLACGAEGKRYAL 115
Query: 200 PSSTIMIKQ 208
PSS IMI Q
Sbjct: 116 PSSRIMIHQ 124
>gi|32476643|ref|NP_869637.1| ATP-dependent Clp protease proteolytic subunit [Rhodopirellula
baltica SH 1]
gi|417303475|ref|ZP_12090530.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodopirellula baltica WH47]
gi|421609953|ref|ZP_16051138.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodopirellula baltica SH28]
gi|67460512|sp|Q7UK66.1|CLPP2_RHOBA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|32447189|emb|CAD77015.1| ATP-dependent clp protease proteolytic subunit [Rhodopirellula
baltica SH 1]
gi|327540248|gb|EGF26837.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodopirellula baltica WH47]
gi|408499333|gb|EKK03807.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodopirellula baltica SH28]
Length = 195
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
VIP+ E+ D+ S L K+RI++LG ++ ++A+ L+LQ +D +K I++
Sbjct: 3 VIPYVVESNGREERTYDIYSRLLKDRIIFLGQQVDDQISNALVAQMLFLQADDPKKDIHM 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T AIYD M +V + T C+G A A+LL AGAKG R A
Sbjct: 63 YINSPG--------GSITAGMAIYDTMQFVSCDVATYCIGQAASMGAVLLTAGAKGKRFA 114
Query: 199 LPSSTIMIKQ 208
LP++ IMI Q
Sbjct: 115 LPNARIMIHQ 124
>gi|423118963|ref|ZP_17106647.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5246]
gi|376399609|gb|EHT12223.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5246]
Length = 207
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQ 137
>gi|335037269|ref|ZP_08530578.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium sp.
ATCC 31749]
gi|333791293|gb|EGL62681.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium sp.
ATCC 31749]
Length = 202
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L +V+ L+ A+ L+L+ E+ +KPI+LYINS G G
Sbjct: 23 DIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPKKPIHLYINSPG--------GM 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FA+YD M Y++ P+ TLC+G A + LL AG G RAALP+++I+I Q
Sbjct: 75 VTSGFAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGTRAALPNASILIHQ 128
>gi|260773194|ref|ZP_05882110.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
metschnikovii CIP 69.14]
gi|260612333|gb|EEX37536.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
metschnikovii CIP 69.14]
Length = 208
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 9/144 (6%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP+I ++P T+ + D+ S L K+R+++L + L++A+
Sbjct: 2 SYQEKNAMSPIIDALVPMVVEQTSRGERSYDIYSRLLKDRVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + TLCVG A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTLCVGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL GA G R LP+S +MI Q
Sbjct: 114 AFLLAGGAPGKRYVLPNSRVMIHQ 137
>gi|440717427|ref|ZP_20897917.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodopirellula baltica SWK14]
gi|449132358|ref|ZP_21768459.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodopirellula europaea 6C]
gi|436437613|gb|ELP31239.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodopirellula baltica SWK14]
gi|448888399|gb|EMB18718.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodopirellula europaea 6C]
Length = 195
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
VIP+ E+ D+ S L K+RI++LG ++ ++A+ L+LQ +D +K I++
Sbjct: 3 VIPYVVESNGREERTYDIYSRLLKDRIIFLGQQVDDQISNALVAQMLFLQADDPKKDIHM 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T AIYD M +V + T C+G A A+LL AGAKG R A
Sbjct: 63 YINSPG--------GSITAGMAIYDTMQFVSCDVATYCIGQAASMGAVLLTAGAKGKRFA 114
Query: 199 LPSSTIMIKQ 208
LP++ IMI Q
Sbjct: 115 LPNARIMIHQ 124
>gi|15888940|ref|NP_354621.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium
fabrum str. C58]
gi|21759065|sp|Q8UEX6.1|CLPP1_AGRT5 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|15156717|gb|AAK87406.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium
fabrum str. C58]
Length = 202
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L +V+ L+ A+ L+L+ E+ +KPI+LYINS G G
Sbjct: 23 DIYSRLLRERIIFLNGEVDDTVSALVCAQLLFLEAENPKKPIHLYINSPG--------GM 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FA+YD M Y++ P+ TLC+G A + LL AG G RAALP+++I+I Q
Sbjct: 75 VTSGFAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGTRAALPNASILIHQ 128
>gi|332708809|ref|ZP_08428780.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332352351|gb|EGJ31920.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 230
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG V + I+A+ LYL+ ED EK I LYINS G G
Sbjct: 44 DIYSRLLRERIVFLGTQVDDVVADSIVAQLLYLEAEDEEKDIQLYINSPG--------GS 95
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M V+P + T+C G A A LL GA G R ALP+S IMI Q
Sbjct: 96 VTAGMAIYDTMQQVRPDVVTICYGLAASMGAFLLAGGAAGKRMALPNSRIMIHQ 149
>gi|152975675|ref|YP_001375192.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cytotoxicus NVH 391-98]
gi|152024427|gb|ABS22197.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cytotoxicus NVH 391-98]
Length = 194
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +G KG R ALP+S IMI Q
Sbjct: 72 TTAGFAILDTMNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSEIMIHQ 125
>gi|50120087|ref|YP_049254.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
atrosepticum SCRI1043]
gi|60389567|sp|Q6D827.1|CLPP_ERWCT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|49610613|emb|CAG74058.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
atrosepticum SCRI1043]
Length = 207
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 78/140 (55%), Gaps = 8/140 (5%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
+ + ++P + +V TA + D+ S L K RI++L + L++A+ L+L+
Sbjct: 6 EQERQAPHMALVPMVVEQTARGERSYDIYSRLLKERIIFLTGQVEDYMANLVVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
AGAKG R LP+S +MI Q
Sbjct: 118 TAGAKGKRICLPNSRVMIHQ 137
>gi|315634780|ref|ZP_07890062.1| ATP-dependent Clp protease proteolytic subunit [Aggregatibacter
segnis ATCC 33393]
gi|315476332|gb|EFU67082.1| ATP-dependent Clp protease proteolytic subunit [Aggregatibacter
segnis ATCC 33393]
Length = 193
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 74/133 (55%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
VI MV+ TS + D+ S L K+R+++L ++ LI+A+ L+L+ ED +K
Sbjct: 3 VIPMVVDQTS---RGERAYDIYSRLLKDRVIFLSGEVEDNMANLIVAQLLFLESEDPDKD 59
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I LYINS G G T AIYD M ++KP + TLCVG A A LL GA G
Sbjct: 60 INLYINSPG--------GSVTAGMAIYDTMQFIKPDVRTLCVGQACSMGAFLLAGGAPGK 111
Query: 196 RAALPSSTIMIKQ 208
R ALP + +MI Q
Sbjct: 112 RGALPHARVMIHQ 124
>gi|296134054|ref|YP_003641301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
potens JR]
gi|296032632|gb|ADG83400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
potens JR]
Length = 194
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G V L++A+ L+L+ ED +K I++YINS G G
Sbjct: 19 DIYSRLLKDRIIFIGGPIDDMVANLVIAQMLFLEAEDPDKDIHIYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A + LL AG KG R ALP + IMI Q
Sbjct: 71 VTAGMAIYDTMQYIKPDVSTICMGQAASMGSFLLAAGTKGKRYALPYTRIMIHQ 124
>gi|296101559|ref|YP_003611705.1| ATP-dependent Clp protease, protease subunit [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295056018|gb|ADF60756.1| ATP-dependent Clp protease, protease subunit [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 207
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQ 137
>gi|269102129|ref|ZP_06154826.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268162027|gb|EEZ40523.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 207
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 9/144 (6%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP++ ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQEKNAMSPILDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIYLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL GAKG R LP+S +MI Q
Sbjct: 114 AFLLAGGAKGKRYCLPNSRVMIHQ 137
>gi|153006264|ref|YP_001380589.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
gi|166201797|sp|A7HFV9.1|CLPP_ANADF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|152029837|gb|ABS27605.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
Length = 204
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG V +++A+ L+L+ ED +K I LYINS G G
Sbjct: 21 DIYSRLLKDRIVFLGTPIDDDVANVVIAQLLFLESEDPDKDISLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKP + T+C+G A A LL GA G R A+P++ IMI Q
Sbjct: 73 VTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARIMIHQ 126
>gi|335041121|ref|ZP_08534237.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
gi|334178919|gb|EGL81568.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
Length = 196
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V ++A+ L+L ED EK + LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTPIDDHVANSVIAQLLFLAAEDPEKDVSLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG A + LL AGAKG R ALP+S IM+ Q
Sbjct: 71 VTAGLAIYDTMQYIKPDVSTICVGLAASMGSFLLAAGAKGKRFALPNSEIMMHQ 124
>gi|333370325|ref|ZP_08462336.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
gi|332978057|gb|EGK14795.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
Length = 201
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
DL S L K+RI+++G SV ++A+ L+L +D +K I LYINS G G
Sbjct: 27 DLYSRLLKDRIIFIGSPIDDSVANSVMAQMLFLAADDPDKEISLYINSPG--------GS 78
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG A A LL AG KG R ALP+S +MI Q
Sbjct: 79 ITAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGTKGKRYALPNSEVMIHQ 132
>gi|312109546|ref|YP_003987862.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacillus
sp. Y4.1MC1]
gi|336233940|ref|YP_004586556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
thermoglucosidasius C56-YS93]
gi|423718668|ref|ZP_17692850.1| ATP-dependent clp protease, proteolytic subunit clpP [Geobacillus
thermoglucosidans TNO-09.020]
gi|311214647|gb|ADP73251.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. Y4.1MC1]
gi|335360795|gb|AEH46475.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
thermoglucosidasius C56-YS93]
gi|383368270|gb|EID45543.1| ATP-dependent clp protease, proteolytic subunit clpP [Geobacillus
thermoglucosidans TNO-09.020]
Length = 196
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V I+++ L+L ED EK I LYINS G G
Sbjct: 19 DIYSRLLKDRIIILGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQ 124
>gi|419652119|ref|ZP_14183202.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-894]
gi|380630164|gb|EIB48407.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-894]
Length = 194
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M IP+ ++ + D+ S L K+RI+ L + ++A+ L+L+ ED K IY
Sbjct: 1 MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASVVAQLLFLEAEDPTKDIY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T F+IYD M Y+KP + T+C+G A A LL GA+G R
Sbjct: 61 LYINSPG--------GVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 113 ALPNSRIMIHQ 123
>gi|206578475|ref|YP_002240083.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae 342]
gi|238893386|ref|YP_002918120.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|288936834|ref|YP_003440893.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
variicola At-22]
gi|290510110|ref|ZP_06549480.1| Clp protease [Klebsiella sp. 1_1_55]
gi|365138464|ref|ZP_09345148.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella sp.
4_1_44FAA]
gi|386033452|ref|YP_005953365.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae KCTC 2242]
gi|419973312|ref|ZP_14488737.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|419978496|ref|ZP_14493792.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|419983882|ref|ZP_14499031.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|419989934|ref|ZP_14504908.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|419995813|ref|ZP_14510618.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|420000724|ref|ZP_14515382.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|420007650|ref|ZP_14522143.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|420013285|ref|ZP_14527596.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|420018370|ref|ZP_14532567.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|420024461|ref|ZP_14538474.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|420030219|ref|ZP_14544046.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|420035322|ref|ZP_14548986.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|420041656|ref|ZP_14555152.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|420047717|ref|ZP_14561033.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|420053419|ref|ZP_14566597.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|420058263|ref|ZP_14571276.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|420064551|ref|ZP_14577360.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|420070362|ref|ZP_14583014.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|420076107|ref|ZP_14588580.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|420084374|ref|ZP_14596634.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|424829257|ref|ZP_18253985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|424934796|ref|ZP_18353168.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|425078088|ref|ZP_18481191.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425080158|ref|ZP_18483255.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|425088721|ref|ZP_18491814.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|425090280|ref|ZP_18493365.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|428149078|ref|ZP_18996910.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428933610|ref|ZP_19007158.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae JHCK1]
gi|428939231|ref|ZP_19012344.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae VA360]
gi|449060067|ref|ZP_21737739.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae hvKP1]
gi|206567533|gb|ACI09309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
pneumoniae 342]
gi|238545702|dbj|BAH62053.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|288891543|gb|ADC59861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
variicola At-22]
gi|289776826|gb|EFD84824.1| Clp protease [Klebsiella sp. 1_1_55]
gi|339760580|gb|AEJ96800.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae KCTC 2242]
gi|363654924|gb|EHL93797.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella sp.
4_1_44FAA]
gi|397348784|gb|EJJ41882.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|397351567|gb|EJJ44650.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|397354933|gb|EJJ47959.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|397366797|gb|EJJ59412.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|397368455|gb|EJJ61061.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|397372939|gb|EJJ65411.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|397380234|gb|EJJ72419.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|397384351|gb|EJJ76471.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|397390327|gb|EJJ82237.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|397399076|gb|EJJ90733.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|397402040|gb|EJJ93652.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|397408058|gb|EJJ99434.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|397416557|gb|EJK07730.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|397418193|gb|EJK09352.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|397424204|gb|EJK15111.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|397433257|gb|EJK23907.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|397437304|gb|EJK27873.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|397441744|gb|EJK32110.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|397447618|gb|EJK37808.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|397450260|gb|EJK40370.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|405591067|gb|EKB64580.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405601813|gb|EKB74966.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|405607083|gb|EKB80053.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|405613964|gb|EKB86685.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|407808983|gb|EKF80234.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|414706676|emb|CCN28380.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|426304302|gb|EKV66449.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae VA360]
gi|426304864|gb|EKV66998.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae JHCK1]
gi|427540935|emb|CCM93048.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448874275|gb|EMB09330.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae hvKP1]
Length = 207
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQ 137
>gi|2342674|gb|AAB70396.1| Similar to ATP-dependent Clp protease (gb|D90915). EST gb|N65461
comes from this gene [Arabidopsis thaliana]
Length = 292
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 69/121 (57%), Gaps = 30/121 (24%)
Query: 92 PPPDLASYLYKNRIVYLGM---------SFVPSVTELILAEFLYLQYEDVEKPIYLYINS 142
PPPDL S L RIVY+GM VP+VTEL++AE +YLQ+ D ++PIY+YINS
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPTDDDIFCFQLVPAVTELVVAELMYLQWLDPKEPIYIYINS 177
Query: 143 TGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPS 201
TGTT+ GE + T+CVG A G+A LLL AG KG R +P
Sbjct: 178 TGTTRDDGET--------------------VHTVCVGAAIGQACLLLSAGTKGKRFMMPH 217
Query: 202 S 202
+
Sbjct: 218 A 218
>gi|402218814|gb|EJT98889.1| hypothetical protein DACRYDRAFT_24016 [Dacryopinax sp. DJM-731 SS1]
Length = 276
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 74/132 (56%), Gaps = 9/132 (6%)
Query: 78 TMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
+M++P T + D+ S L + R++ L ++ + +A+ L+L+ E+ KPI
Sbjct: 43 SMLVPIVIEQTGRGERSYDIYSRLLRERVIMLAGPVTDTLASVTVAQLLFLEAEEAMKPI 102
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
+LYINS G G T AIYD M YV PI+T C+G A +LLL AG KG R
Sbjct: 103 HLYINSPG--------GSVTAGMAIYDTMRYVTSPIYTYCMGQAASMGSLLLAAGEKGKR 154
Query: 197 AALPSSTIMIKQ 208
ALP++TIMI Q
Sbjct: 155 RALPNATIMIHQ 166
>gi|402298633|ref|ZP_10818309.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
alcalophilus ATCC 27647]
gi|401726173|gb|EJS99417.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
alcalophilus ATCC 27647]
Length = 193
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+A+ L+L ED +K I LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLNAEDPDKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMNFIKPKVSTICIGMAASMGAFLLSAGEKGKRYALPNSEVMIHQ 124
>gi|336249036|ref|YP_004592746.1| hypothetical protein EAE_12765 [Enterobacter aerogenes KCTC 2190]
gi|365104949|ref|ZP_09334341.1| ATP-dependent Clp protease proteolytic subunit [Citrobacter
freundii 4_7_47CFAA]
gi|375259344|ref|YP_005018514.1| hypothetical protein KOX_12745 [Klebsiella oxytoca KCTC 1686]
gi|395228096|ref|ZP_10406420.1| atp-dependent clp protease proteolytic subunit [Citrobacter sp. A1]
gi|397656325|ref|YP_006497027.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
E718]
gi|402843112|ref|ZP_10891514.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Klebsiella sp. OBRC7]
gi|420370111|ref|ZP_14870727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 1235-66]
gi|421843723|ref|ZP_16276883.1| hypothetical protein D186_01745 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|423101608|ref|ZP_17089310.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5242]
gi|423106996|ref|ZP_17094691.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5243]
gi|423112881|ref|ZP_17100572.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5245]
gi|423127775|ref|ZP_17115454.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5250]
gi|424730593|ref|ZP_18159188.1| atp-dependent clp protease proteolytic subunit [Citrobacter sp.
L17]
gi|440288751|ref|YP_007341516.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Enterobacteriaceae bacterium strain FGI 57]
gi|334735092|gb|AEG97467.1| hypothetical protein EAE_12765 [Enterobacter aerogenes KCTC 2190]
gi|363643890|gb|EHL83194.1| ATP-dependent Clp protease proteolytic subunit [Citrobacter
freundii 4_7_47CFAA]
gi|365908822|gb|AEX04275.1| hypothetical protein KOX_12745 [Klebsiella oxytoca KCTC 1686]
gi|376389122|gb|EHT01814.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5243]
gi|376390375|gb|EHT03061.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5245]
gi|376391396|gb|EHT04075.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5242]
gi|376394814|gb|EHT07464.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5250]
gi|391320540|gb|EIQ77372.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 1235-66]
gi|394344931|gb|AFN31052.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
E718]
gi|394718218|gb|EJF23855.1| atp-dependent clp protease proteolytic subunit [Citrobacter sp. A1]
gi|402277743|gb|EJU26811.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Klebsiella sp. OBRC7]
gi|411775444|gb|EKS58890.1| hypothetical protein D186_01745 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|422894786|gb|EKU34593.1| atp-dependent clp protease proteolytic subunit [Citrobacter sp.
L17]
gi|440048273|gb|AGB79331.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Enterobacteriaceae bacterium strain FGI 57]
gi|455641803|gb|EMF20974.1| hypothetical protein H262_21028 [Citrobacter freundii GTC 09479]
Length = 207
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQ 137
>gi|423482542|ref|ZP_17459232.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG6X1-2]
gi|401143846|gb|EJQ51380.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus cereus
BAG6X1-2]
Length = 193
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ +G V ++A+ L+L+ E+ EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAENAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL AGAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSEIMIHQ 124
>gi|304407481|ref|ZP_07389133.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
curdlanolyticus YK9]
gi|304343432|gb|EFM09274.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
curdlanolyticus YK9]
Length = 193
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + V I+A+ L+L +D EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDDVANSIIAQLLFLAADDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M ++KP + T+CVG A +LLL AGAKG R +LP+S +MI Q
Sbjct: 71 VTAGMGIFDTMQFIKPDVSTICVGMAASMGSLLLTAGAKGKRFSLPNSEVMIHQ 124
>gi|397167167|ref|ZP_10490610.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
radicincitans DSM 16656]
gi|396091313|gb|EJI88880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
radicincitans DSM 16656]
Length = 207
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQ 137
>gi|77360986|ref|YP_340561.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
haloplanktis TAC125]
gi|110816463|sp|Q3IF46.1|CLPP_PSEHT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|76875897|emb|CAI87118.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
(Caseinolytic protease) (Protease Ti)(Heat shock protein
F21.5) [Pseudoalteromonas haloplanktis TAC125]
Length = 205
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 21/144 (14%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEF 124
+ P + ++ MV+ EQ P D+ S L K RI++L ++ LILA+
Sbjct: 6 TDPLNALVPMVV--------EQTPKGERSYDIYSRLLKERIIFLTGPVEDNMANLILAQM 57
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T AIYD M ++KP + T+CVG A
Sbjct: 58 LFLESENPDKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMG 109
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 110 AFLLTAGAKGKRFCLPNSRVMIHQ 133
>gi|342214320|ref|ZP_08707021.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. oral taxon 780 str. F0422]
gi|341594551|gb|EGS37240.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. oral taxon 780 str. F0422]
Length = 199
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 75/133 (56%), Gaps = 9/133 (6%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++M +P T + D+ S L K+RI+ L +V I+A+ L+L+ ED +K
Sbjct: 1 MSMYVPIVVEQTGRGERSYDIYSRLLKDRIILLSGPIDDTVANSIVAQLLFLESEDPDKD 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I+LYINS G G T AIYD M Y+KP + T+CVG+A +LLL AGA G
Sbjct: 61 IHLYINSPG--------GVVTAGMAIYDTMQYIKPDVSTICVGSAASMGSLLLTAGAPGK 112
Query: 196 RAALPSSTIMIKQ 208
R ALP S IMI Q
Sbjct: 113 RYALPHSRIMIHQ 125
>gi|284047883|ref|YP_003398222.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
gi|283952104|gb|ADB46907.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
Length = 197
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++ + LI+A+ L+L+ ED +K ++LYINS G G
Sbjct: 19 DIYSRLLKDRIIFVTGEIEDHMANLIIAQLLFLESEDPDKDVHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M Y++P + T+CVG A A++LL AG KG R ALP S +MI Q
Sbjct: 71 VSAGLAIYDTMQYIRPDVSTICVGMAASMASVLLAAGTKGKRYALPHSRVMIHQ 124
>gi|225714260|gb|ACO12976.1| ATP-dependent Clp protease proteolytic subunit, mitochondrial
precursor [Lepeophtheirus salmonis]
Length = 222
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L ++ L++A+ L+LQ E +KPI++YINS G G
Sbjct: 41 DIYSRLLKDRIICLMGQVDDVISGLMVAQLLFLQAESGKKPIHMYINSPG--------GS 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y++PPI T CVG A +LLL AG KG R +LP+S IM+ Q
Sbjct: 93 VTAGLAIYDTMQYIQPPIATWCVGQACSMGSLLLTAGTKGMRHSLPNSRIMVHQ 146
>gi|239828281|ref|YP_002950905.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus sp.
WCH70]
gi|259585956|sp|C5D7M9.1|CLPP_GEOSW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|239808574|gb|ACS25639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. WCH70]
Length = 196
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V I+++ L+L ED EK I LYINS G G
Sbjct: 19 DIYSRLLKDRIIILGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQ 124
>gi|317492909|ref|ZP_07951333.1| Clp protease [Enterobacteriaceae bacterium 9_2_54FAA]
gi|365835459|ref|ZP_09376878.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Hafnia
alvei ATCC 51873]
gi|316919031|gb|EFV40366.1| Clp protease [Enterobacteriaceae bacterium 9_2_54FAA]
gi|364566034|gb|EHM43738.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Hafnia
alvei ATCC 51873]
Length = 206
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 78/143 (54%), Gaps = 8/143 (5%)
Query: 66 SFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFL 125
S+ + +P + +V T+ + D+ S L K RI++L + LI+A+ L
Sbjct: 2 SYSGERDLAPHMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQML 61
Query: 126 YLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAA 185
+L+ E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A A
Sbjct: 62 FLEAENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGA 113
Query: 186 LLLGAGAKGNRAALPSSTIMIKQ 208
LL AGAKG R LP+S +MI Q
Sbjct: 114 FLLTAGAKGKRFCLPNSRVMIHQ 136
>gi|225713510|gb|ACO12601.1| ATP-dependent Clp protease proteolytic subunit, mitochondrial
precursor [Lepeophtheirus salmonis]
Length = 222
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L ++ L++A+ L+LQ E +KPI++YINS G G
Sbjct: 41 DIYSRLLKDRIICLMGQVDDVISGLMVAQLLFLQAESGKKPIHMYINSPG--------GS 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y++PPI T CVG A +LLL AG KG R +LP+S IM+ Q
Sbjct: 93 VTAGLAIYDTMQYIQPPIATWCVGQACSMGSLLLTAGTKGMRHSLPNSRIMVHQ 146
>gi|89098789|ref|ZP_01171670.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. NRRL
B-14911]
gi|89086465|gb|EAR65585.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. NRRL
B-14911]
Length = 201
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V+ I+A+ L+L+ E+ EK I LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVSNSIVAQLLFLEAENPEKDITLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y++P + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQYIRPKVSTVCIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQ 124
>gi|237730414|ref|ZP_04560895.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226905953|gb|EEH91871.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 243
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 44 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 97
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 98 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 149
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 150 AFLLTAGAKGKRFCLPNSRVMIHQ 173
>gi|433324497|ref|ZP_20401784.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
J96]
gi|432347011|gb|ELL41475.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
J96]
Length = 207
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQ 137
>gi|401678822|ref|ZP_10810776.1| ClpP Protein [Enterobacter sp. SST3]
gi|400213918|gb|EJO44850.1| ClpP Protein [Enterobacter sp. SST3]
Length = 207
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQ 137
>gi|345298112|ref|YP_004827470.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
asburiae LF7a]
gi|392977875|ref|YP_006476463.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. dissolvens SDM]
gi|401762532|ref|YP_006577539.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. cloacae ENHKU01]
gi|345092049|gb|AEN63685.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
asburiae LF7a]
gi|392323808|gb|AFM58761.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. dissolvens SDM]
gi|400174066|gb|AFP68915.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. cloacae ENHKU01]
Length = 207
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQ 137
>gi|443315108|ref|ZP_21044618.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
gi|442785290|gb|ELR95120.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
Length = 206
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 61/109 (55%), Gaps = 8/109 (7%)
Query: 100 LYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAF 159
L++ RI++L S+ I+A LYL ED KPIYLYINS G G T
Sbjct: 27 LFRERIIFLSEEVTDSIANAIVAYLLYLDSEDNTKPIYLYINSPG--------GSVTAGM 78
Query: 160 AIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
AIYD M Y+K + T+CVG A A LL AG KG R ALP + IMI Q
Sbjct: 79 AIYDTMQYIKAEVITICVGLAASMGAFLLAAGTKGKRTALPHARIMIHQ 127
>gi|365848314|ref|ZP_09388791.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Yokenella regensburgei ATCC 43003]
gi|364571022|gb|EHM48621.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Yokenella regensburgei ATCC 43003]
Length = 220
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 21 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 74
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 75 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 126
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 127 AFLLTAGAKGKRFCLPNSRVMIHQ 150
>gi|320354136|ref|YP_004195475.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfobulbus
propionicus DSM 2032]
gi|320122638|gb|ADW18184.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfobulbus
propionicus DSM 2032]
Length = 200
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 69/124 (55%), Gaps = 13/124 (10%)
Query: 90 EQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTG 144
EQ P D+ S L K RI++LG V L++A+ L+L+ ED +K I YINS G
Sbjct: 9 EQSPRGERAFDIYSRLLKERIIFLGTQVNDDVASLVVAQLLFLEAEDPDKDITFYINSPG 68
Query: 145 TTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
G T AIYD M Y++ + TLC+G A ALLL +GA G R ALP+S I
Sbjct: 69 --------GSVTAGMAIYDTMQYIRCDVATLCMGQAASMGALLLASGAAGKRFALPNSRI 120
Query: 205 MIKQ 208
MI Q
Sbjct: 121 MIHQ 124
>gi|282891306|ref|ZP_06299808.1| hypothetical protein pah_c050o084 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338175057|ref|YP_004651867.1| ATP-dependent Clp protease proteolytic subunit 2 [Parachlamydia
acanthamoebae UV-7]
gi|281498803|gb|EFB41120.1| hypothetical protein pah_c050o084 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479415|emb|CCB86013.1| ATP-dependent Clp protease proteolytic subunit 2 [Parachlamydia
acanthamoebae UV-7]
Length = 202
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L ++RIV++G V +++A+ L+L+ ED +K ++LYINS G
Sbjct: 18 TARGERSMDIFSRLLQDRIVFIGTDITDQVANIVVAQLLFLKMEDPKKDVHLYINSMG-- 75
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
GY T AIYD + ++ + T C+G A ALLL AG KG R ALP+S IMI
Sbjct: 76 ------GYITSGLAIYDTLRWMTCDVNTYCIGQASSMGALLLMAGTKGKRFALPNSRIMI 129
Query: 207 KQ 208
Q
Sbjct: 130 HQ 131
>gi|212640342|ref|YP_002316862.1| ATP-dependent Clp protease proteolytic subunit [Anoxybacillus
flavithermus WK1]
gi|433447199|ref|ZP_20410832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anoxybacillus
flavithermus TNO-09.006]
gi|226706440|sp|B7GL34.1|CLPP_ANOFW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|212561822|gb|ACJ34877.1| ATP-dependent Clp protease proteolytic subunit (class III
heat-shock protein) [Anoxybacillus flavithermus WK1]
gi|432000033|gb|ELK20939.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anoxybacillus
flavithermus TNO-09.006]
Length = 196
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V I+++ L+L ED EK I LYINS G G
Sbjct: 19 DIYSRLLKDRIIILGSPIDDHVANSIVSQLLFLAAEDPEKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQ 124
>gi|15800167|ref|NP_286179.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EDL933]
gi|15829745|ref|NP_308518.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. Sakai]
gi|16128422|ref|NP_414971.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. MG1655]
gi|26246448|ref|NP_752487.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CFT073]
gi|30061939|ref|NP_836110.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2a str. 2457T]
gi|56479658|ref|NP_706331.2| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2a str. 301]
gi|74311012|ref|YP_309431.1| ATP-dependent Clp protease proteolytic subunit [Shigella sonnei
Ss046]
gi|82542925|ref|YP_406872.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii
Sb227]
gi|82775656|ref|YP_402003.1| ATP-dependent Clp protease proteolytic subunit [Shigella
dysenteriae Sd197]
gi|91209511|ref|YP_539497.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UTI89]
gi|110640698|ref|YP_668426.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
536]
gi|110804465|ref|YP_687985.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri 5
str. 8401]
gi|117622697|ref|YP_851610.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
APEC O1]
gi|157158299|ref|YP_001461624.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
E24377A]
gi|157159964|ref|YP_001457282.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
HS]
gi|168754541|ref|ZP_02779548.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4401]
gi|168768391|ref|ZP_02793398.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4486]
gi|168778128|ref|ZP_02803135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4196]
gi|168778929|ref|ZP_02803936.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4076]
gi|168786287|ref|ZP_02811294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC869]
gi|170021190|ref|YP_001726144.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ATCC 8739]
gi|170080023|ref|YP_001729343.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. K-12 substr. DH10B]
gi|170683276|ref|YP_001742581.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SMS-3-5]
gi|187731303|ref|YP_001879148.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii CDC
3083-94]
gi|188492597|ref|ZP_02999867.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 53638]
gi|191174674|ref|ZP_03036146.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli F11]
gi|193064129|ref|ZP_03045213.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E22]
gi|195938496|ref|ZP_03083878.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC4024]
gi|208809540|ref|ZP_03251877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4206]
gi|208815859|ref|ZP_03257038.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4045]
gi|208822964|ref|ZP_03263282.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4042]
gi|209917654|ref|YP_002291738.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE11]
gi|215485518|ref|YP_002327949.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O127:H6 str. E2348/69]
gi|217326412|ref|ZP_03442496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. TW14588]
gi|218549895|ref|YP_002383686.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
fergusonii ATCC 35469]
gi|218553004|ref|YP_002385917.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
IAI1]
gi|218557347|ref|YP_002390260.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
S88]
gi|218688301|ref|YP_002396513.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ED1a]
gi|218693900|ref|YP_002401567.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
55989]
gi|218698651|ref|YP_002406280.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
IAI39]
gi|218703721|ref|YP_002411240.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UMN026]
gi|222155227|ref|YP_002555366.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
LF82]
gi|227884552|ref|ZP_04002357.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
83972]
gi|238899725|ref|YP_002925521.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
BW2952]
gi|251783945|ref|YP_002998249.1| clpP, subunit of ClpP serine protease, ClpAP, ClpXP and ClpAXP
[Escherichia coli BL21(DE3)]
gi|253774574|ref|YP_003037405.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160506|ref|YP_003043614.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli B
str. REL606]
gi|254287310|ref|YP_003053058.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
BL21(DE3)]
gi|254791621|ref|YP_003076458.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. TW14359]
gi|260842638|ref|YP_003220416.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. 12009]
gi|260853660|ref|YP_003227551.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. 11368]
gi|260866598|ref|YP_003233000.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H- str. 11128]
gi|261223919|ref|ZP_05938200.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O157:H7 str. FRIK2000]
gi|261256367|ref|ZP_05948900.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. FRIK966]
gi|291281344|ref|YP_003498162.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. CB9615]
gi|293403558|ref|ZP_06647649.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1412]
gi|293408587|ref|ZP_06652426.1| Clp protease [Escherichia coli B354]
gi|297516115|ref|ZP_06934501.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
OP50]
gi|298379170|ref|ZP_06989051.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1302]
gi|300818231|ref|ZP_07098442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 107-1]
gi|300820317|ref|ZP_07100469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 119-7]
gi|300903295|ref|ZP_07121223.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 84-1]
gi|300918180|ref|ZP_07134787.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 115-1]
gi|300930260|ref|ZP_07145673.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 187-1]
gi|300947910|ref|ZP_07162058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 116-1]
gi|301025667|ref|ZP_07189185.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 196-1]
gi|301330696|ref|ZP_07223298.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 78-1]
gi|306813096|ref|ZP_07447289.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
NC101]
gi|307312185|ref|ZP_07591821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli W]
gi|309794830|ref|ZP_07689251.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 145-7]
gi|331640957|ref|ZP_08342092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H736]
gi|331645613|ref|ZP_08346717.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M605]
gi|331651375|ref|ZP_08352400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M718]
gi|331656494|ref|ZP_08357456.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA206]
gi|331661818|ref|ZP_08362741.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA143]
gi|331666792|ref|ZP_08367666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA271]
gi|331671984|ref|ZP_08372780.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA280]
gi|331676109|ref|ZP_08376821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H591]
gi|331681832|ref|ZP_08382465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H299]
gi|366160317|ref|ZP_09460179.1| ATP-dependent Clp protease proteolytic subunit [Escherichia sp.
TW09308]
gi|378714157|ref|YP_005279050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli KO11FL]
gi|383177027|ref|YP_005455032.1| ATP-dependent Clp protease proteolytic subunit [Shigella sonnei
53G]
gi|384541993|ref|YP_005726054.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2002017]
gi|386596687|ref|YP_006093087.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DH1]
gi|386598154|ref|YP_006099660.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli IHE3034]
gi|386605609|ref|YP_006111909.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UM146]
gi|386607800|ref|YP_006123286.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli W]
gi|386622809|ref|YP_006142537.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O7:K1 str. CE10]
gi|386628026|ref|YP_006147746.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. 'clone D i2']
gi|386632946|ref|YP_006152665.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. 'clone D i14']
gi|386637852|ref|YP_006104650.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ABU 83972]
gi|386702756|ref|YP_006166593.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KO11FL]
gi|386703656|ref|YP_006167503.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
P12b]
gi|386708240|ref|YP_006171961.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli W]
gi|387505454|ref|YP_006157710.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. RM12579]
gi|387605947|ref|YP_006094803.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
042]
gi|387610962|ref|YP_006114078.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
ETEC H10407]
gi|387615754|ref|YP_006118776.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O83:H1 str. NRG 857C]
gi|387620196|ref|YP_006127823.1| hypothetical protein ECDH1ME8569_0422 [Escherichia coli DH1]
gi|387828451|ref|YP_003348388.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE15]
gi|387881033|ref|YP_006311335.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
Xuzhou21]
gi|388476543|ref|YP_488729.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. W3110]
gi|404373759|ref|ZP_10978994.1| ATP-dependent Clp protease proteolytic subunit [Escherichia sp.
1_1_43]
gi|407467887|ref|YP_006785671.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|407483383|ref|YP_006780532.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2011C-3493]
gi|410483936|ref|YP_006771482.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|416273477|ref|ZP_11643392.1| ATP-dependent Clp protease proteolytic subunit [Shigella
dysenteriae CDC 74-1112]
gi|416287650|ref|ZP_11648936.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii
ATCC 9905]
gi|416296133|ref|ZP_11651339.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
CDC 796-83]
gi|416312992|ref|ZP_11657927.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1044]
gi|416316808|ref|ZP_11659940.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC1212]
gi|416325624|ref|ZP_11666032.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1125]
gi|416334479|ref|ZP_11671387.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
WV_060327]
gi|416341381|ref|ZP_11676004.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
EC4100B]
gi|416780506|ref|ZP_11876892.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. G5101]
gi|416791657|ref|ZP_11881790.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. 493-89]
gi|416803300|ref|ZP_11886651.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. H 2687]
gi|416811871|ref|ZP_11890144.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. 3256-97]
gi|416822832|ref|ZP_11895159.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. USDA 5905]
gi|416835006|ref|ZP_11901254.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. LSU-61]
gi|417082904|ref|ZP_11951073.1| hypothetical protein i01_00596 [Escherichia coli cloneA_i1]
gi|417114443|ref|ZP_11965714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1.2741]
gi|417121175|ref|ZP_11970629.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 97.0246]
gi|417134652|ref|ZP_11979437.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5.0588]
gi|417139755|ref|ZP_11983177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 97.0259]
gi|417144466|ref|ZP_11986272.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1.2264]
gi|417152903|ref|ZP_11991694.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 96.0497]
gi|417168750|ref|ZP_12001201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 99.0741]
gi|417174458|ref|ZP_12004254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.2608]
gi|417179207|ref|ZP_12007307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 93.0624]
gi|417190845|ref|ZP_12013441.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 4.0522]
gi|417218290|ref|ZP_12023892.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli JB1-95]
gi|417225434|ref|ZP_12028725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 96.154]
gi|417247136|ref|ZP_12040237.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 9.0111]
gi|417253476|ref|ZP_12045235.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 4.0967]
gi|417260673|ref|ZP_12048171.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2.3916]
gi|417267200|ref|ZP_12054561.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.3884]
gi|417270620|ref|ZP_12057973.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2.4168]
gi|417275444|ref|ZP_12062781.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.2303]
gi|417284212|ref|ZP_12071507.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3003]
gi|417288247|ref|ZP_12075532.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW07793]
gi|417293158|ref|ZP_12080438.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli B41]
gi|417299495|ref|ZP_12086725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 900105 (10e)]
gi|417306939|ref|ZP_12093819.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
PCN033]
gi|417661013|ref|ZP_12310594.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
AA86]
gi|417754233|ref|ZP_12402328.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2B]
gi|417803792|ref|ZP_12450827.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. LB226692]
gi|417826439|ref|ZP_12473017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri J1713]
gi|417831544|ref|ZP_12478066.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 01-09591]
gi|417867743|ref|ZP_12512778.1| hypothetical protein C22711_4669 [Escherichia coli O104:H4 str.
C227-11]
gi|417945744|ref|ZP_12588973.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
XH140A]
gi|417976590|ref|ZP_12617382.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
XH001]
gi|418253617|ref|ZP_12878642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 6603-63]
gi|418262477|ref|ZP_12883856.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei str. Moseley]
gi|418941047|ref|ZP_13494387.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H43 str. T22]
gi|419000594|ref|ZP_13548156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1B]
gi|419006128|ref|ZP_13553584.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1C]
gi|419011995|ref|ZP_13559360.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1D]
gi|419016899|ref|ZP_13564225.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1E]
gi|419022590|ref|ZP_13569832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2A]
gi|419027401|ref|ZP_13574601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2C]
gi|419033183|ref|ZP_13580281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2D]
gi|419038181|ref|ZP_13585241.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2E]
gi|419043480|ref|ZP_13590454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3A]
gi|419055094|ref|ZP_13601952.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3C]
gi|419060688|ref|ZP_13607473.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3D]
gi|419066566|ref|ZP_13613247.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3E]
gi|419073638|ref|ZP_13619211.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3F]
gi|419078751|ref|ZP_13624236.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4A]
gi|419084402|ref|ZP_13629818.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4B]
gi|419096498|ref|ZP_13641742.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4D]
gi|419102072|ref|ZP_13647239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4E]
gi|419107525|ref|ZP_13652635.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4F]
gi|419113292|ref|ZP_13658327.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5A]
gi|419118878|ref|ZP_13663863.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5B]
gi|419124476|ref|ZP_13669380.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5C]
gi|419130098|ref|ZP_13674951.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5D]
gi|419134856|ref|ZP_13679665.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5E]
gi|419140968|ref|ZP_13685725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6A]
gi|419152270|ref|ZP_13696858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6C]
gi|419157778|ref|ZP_13702304.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6D]
gi|419162710|ref|ZP_13707190.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6E]
gi|419168433|ref|ZP_13712831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7A]
gi|419173782|ref|ZP_13717638.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7B]
gi|419179426|ref|ZP_13723051.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7C]
gi|419184984|ref|ZP_13728506.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7D]
gi|419190232|ref|ZP_13733700.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7E]
gi|419195534|ref|ZP_13738942.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8A]
gi|419201573|ref|ZP_13744801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8B]
gi|419207438|ref|ZP_13750566.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8C]
gi|419213878|ref|ZP_13756910.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8D]
gi|419219702|ref|ZP_13762659.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8E]
gi|419225166|ref|ZP_13768056.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9A]
gi|419230910|ref|ZP_13773702.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9B]
gi|419236285|ref|ZP_13779036.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9C]
gi|419241879|ref|ZP_13784529.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9D]
gi|419247288|ref|ZP_13789903.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9E]
gi|419253064|ref|ZP_13795614.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10A]
gi|419259073|ref|ZP_13801533.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10B]
gi|419265176|ref|ZP_13807563.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10C]
gi|419270761|ref|ZP_13813094.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10D]
gi|419276559|ref|ZP_13818829.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10E]
gi|419282161|ref|ZP_13824383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10F]
gi|419287902|ref|ZP_13830020.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11A]
gi|419293241|ref|ZP_13835302.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11B]
gi|419298681|ref|ZP_13840699.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11C]
gi|419304965|ref|ZP_13846879.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11D]
gi|419309990|ref|ZP_13851867.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11E]
gi|419315309|ref|ZP_13857137.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12A]
gi|419321085|ref|ZP_13862828.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12B]
gi|419327332|ref|ZP_13868965.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12C]
gi|419332742|ref|ZP_13874306.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12D]
gi|419339678|ref|ZP_13881155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12E]
gi|419344085|ref|ZP_13885469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13A]
gi|419353421|ref|ZP_13894707.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13C]
gi|419358764|ref|ZP_13899995.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13D]
gi|419363857|ref|ZP_13905039.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13E]
gi|419368721|ref|ZP_13909850.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14A]
gi|419373906|ref|ZP_13914962.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14B]
gi|419379324|ref|ZP_13920305.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14C]
gi|419384580|ref|ZP_13925484.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14D]
gi|419699353|ref|ZP_14226969.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SCI-07]
gi|419811819|ref|ZP_14336691.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O32:H37 str. P4]
gi|419862464|ref|ZP_14385069.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H25 str. CVM9340]
gi|419867899|ref|ZP_14390213.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. CVM9450]
gi|419876969|ref|ZP_14398628.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9534]
gi|419882604|ref|ZP_14403814.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9545]
gi|419888442|ref|ZP_14408949.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9570]
gi|419893037|ref|ZP_14413043.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9574]
gi|419900593|ref|ZP_14420019.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM9942]
gi|419906391|ref|ZP_14425303.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O26:H11 str. CVM10026]
gi|419915478|ref|ZP_14433843.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KD1]
gi|419916845|ref|ZP_14435129.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KD2]
gi|419923190|ref|ZP_14441152.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
541-15]
gi|419928055|ref|ZP_14445775.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
541-1]
gi|419937108|ref|ZP_14454024.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
576-1]
gi|419945558|ref|ZP_14461997.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
HM605]
gi|419948924|ref|ZP_14465187.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CUMT8]
gi|420088256|ref|ZP_14600160.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9602]
gi|420092934|ref|ZP_14604624.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9634]
gi|420103064|ref|ZP_14613978.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9455]
gi|420109693|ref|ZP_14619793.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9553]
gi|420113374|ref|ZP_14623117.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10021]
gi|420119640|ref|ZP_14628905.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10030]
gi|420125718|ref|ZP_14634509.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10224]
gi|420130828|ref|ZP_14639308.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM9952]
gi|420267737|ref|ZP_14770144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA22]
gi|420278960|ref|ZP_14781227.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW06591]
gi|420284842|ref|ZP_14787060.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW10246]
gi|420290573|ref|ZP_14792738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW11039]
gi|420296234|ref|ZP_14798331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09109]
gi|420302234|ref|ZP_14804266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW10119]
gi|420307840|ref|ZP_14809814.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1738]
gi|420313332|ref|ZP_14815240.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1734]
gi|420318881|ref|ZP_14820738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2850-71]
gi|420324044|ref|ZP_14825830.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri CCH060]
gi|420329691|ref|ZP_14831396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-1770]
gi|420334604|ref|ZP_14836226.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-315]
gi|420340003|ref|ZP_14841530.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-404]
gi|420351206|ref|ZP_14852405.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 4444-74]
gi|420357063|ref|ZP_14858079.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 3226-85]
gi|420361980|ref|ZP_14862906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 4822-66]
gi|420378645|ref|ZP_14878144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 225-75]
gi|420384075|ref|ZP_14883463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPECa12]
gi|420389777|ref|ZP_14889050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPEC C342-62]
gi|421681140|ref|ZP_16120970.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 1485-80]
gi|421777839|ref|ZP_16214429.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
AD30]
gi|421810660|ref|ZP_16246471.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0416]
gi|421816753|ref|ZP_16252316.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0821]
gi|421822138|ref|ZP_16257576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK920]
gi|421828871|ref|ZP_16264201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA7]
gi|422330694|ref|ZP_16411711.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
4_1_47FAA]
gi|422748496|ref|ZP_16802409.1| Clp protease [Escherichia coli H252]
gi|422753090|ref|ZP_16806917.1| Clp protease [Escherichia coli H263]
gi|422763232|ref|ZP_16816987.1| Clp protease [Escherichia coli E1167]
gi|422764968|ref|ZP_16818695.1| Clp protease [Escherichia coli E1520]
gi|422769666|ref|ZP_16823357.1| Clp protease [Escherichia coli E482]
gi|422777134|ref|ZP_16830787.1| Clp protease [Escherichia coli H120]
gi|422782770|ref|ZP_16835555.1| Clp protease [Escherichia coli TW10509]
gi|422785047|ref|ZP_16837786.1| Clp protease [Escherichia coli H489]
gi|422791245|ref|ZP_16843948.1| Clp protease [Escherichia coli TA007]
gi|422802318|ref|ZP_16850812.1| Clp protease [Escherichia coli M863]
gi|422804516|ref|ZP_16852948.1| Clp protease [Escherichia fergusonii B253]
gi|422816451|ref|ZP_16864666.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
M919]
gi|422830602|ref|ZP_16878758.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
B093]
gi|422835147|ref|ZP_16883204.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
E101]
gi|422838959|ref|ZP_16886931.1| Clp protease [Escherichia coli H397]
gi|422960324|ref|ZP_16971772.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
H494]
gi|422974758|ref|ZP_16976459.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
TA124]
gi|422991153|ref|ZP_16981924.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. C227-11]
gi|422993092|ref|ZP_16983856.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. C236-11]
gi|422998303|ref|ZP_16989059.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 09-7901]
gi|423006764|ref|ZP_16997507.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 04-8351]
gi|423008407|ref|ZP_16999145.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-3677]
gi|423022594|ref|ZP_17013297.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4404]
gi|423027748|ref|ZP_17018441.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4522]
gi|423033585|ref|ZP_17024269.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4623]
gi|423036451|ref|ZP_17027125.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423041571|ref|ZP_17032238.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423048257|ref|ZP_17038914.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423051841|ref|ZP_17040649.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423058806|ref|ZP_17047602.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|423652932|ref|ZP_17628235.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA31]
gi|423701218|ref|ZP_17675677.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
H730]
gi|423710208|ref|ZP_17684558.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
B799]
gi|424075299|ref|ZP_17812663.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA505]
gi|424081627|ref|ZP_17818503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA517]
gi|424088248|ref|ZP_17824523.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1996]
gi|424113671|ref|ZP_17847839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA3]
gi|424132076|ref|ZP_17864895.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA10]
gi|424145062|ref|ZP_17876849.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA15]
gi|424151208|ref|ZP_17882479.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA24]
gi|424184946|ref|ZP_17887912.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA25]
gi|424266451|ref|ZP_17893814.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA28]
gi|424421800|ref|ZP_17899543.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA32]
gi|424459914|ref|ZP_17910872.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA39]
gi|424472944|ref|ZP_17922637.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA42]
gi|424478892|ref|ZP_17928155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW07945]
gi|424484962|ref|ZP_17933846.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09098]
gi|424491084|ref|ZP_17939498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09195]
gi|424498173|ref|ZP_17945463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4203]
gi|424504402|ref|ZP_17951198.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4196]
gi|424510660|ref|ZP_17956914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW14313]
gi|424518228|ref|ZP_17962674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW14301]
gi|424524057|ref|ZP_17968098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4421]
gi|424530265|ref|ZP_17973911.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4422]
gi|424536239|ref|ZP_17979518.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4013]
gi|424542147|ref|ZP_17984984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4402]
gi|424548471|ref|ZP_17990695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4439]
gi|424554735|ref|ZP_17996473.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4436]
gi|424561082|ref|ZP_18002383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4437]
gi|424567110|ref|ZP_18008042.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4448]
gi|424747928|ref|ZP_18176080.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CFSAN001629]
gi|424766683|ref|ZP_18194028.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CFSAN001630]
gi|424768157|ref|ZP_18195449.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CFSAN001632]
gi|424836929|ref|ZP_18261566.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
5a str. M90T]
gi|425095924|ref|ZP_18498965.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 3.4870]
gi|425102063|ref|ZP_18504728.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 5.2239]
gi|425123686|ref|ZP_18525280.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0586]
gi|425129726|ref|ZP_18530842.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.2524]
gi|425136066|ref|ZP_18536805.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0833]
gi|425141966|ref|ZP_18542273.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0869]
gi|425153902|ref|ZP_18553465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA34]
gi|425160351|ref|ZP_18559540.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA506]
gi|425165861|ref|ZP_18564685.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA507]
gi|425178034|ref|ZP_18576103.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1999]
gi|425197263|ref|ZP_18593928.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE037]
gi|425209679|ref|ZP_18605430.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA4]
gi|425215719|ref|ZP_18611052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA23]
gi|425222289|ref|ZP_18617163.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA49]
gi|425228534|ref|ZP_18622945.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA45]
gi|425234834|ref|ZP_18628808.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TT12B]
gi|425240839|ref|ZP_18634489.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MA6]
gi|425246963|ref|ZP_18640187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5905]
gi|425252694|ref|ZP_18645586.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli CB7326]
gi|425259005|ref|ZP_18651383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC96038]
gi|425265103|ref|ZP_18657041.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5412]
gi|425281805|ref|ZP_18672926.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW00353]
gi|425292563|ref|ZP_18683162.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA38]
gi|425303944|ref|ZP_18693733.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli N1]
gi|425309306|ref|ZP_18698786.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1735]
gi|425315219|ref|ZP_18704309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1736]
gi|425327464|ref|ZP_18715700.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1846]
gi|425333649|ref|ZP_18721382.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1847]
gi|425340070|ref|ZP_18727325.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1848]
gi|425352161|ref|ZP_18738555.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1850]
gi|425358151|ref|ZP_18744137.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1856]
gi|425364261|ref|ZP_18749824.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1862]
gi|425370706|ref|ZP_18755682.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1864]
gi|425377258|ref|ZP_18761660.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1865]
gi|425383500|ref|ZP_18767391.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1866]
gi|425390200|ref|ZP_18773670.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1868]
gi|425396318|ref|ZP_18779376.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1869]
gi|425402303|ref|ZP_18784919.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1870]
gi|425408844|ref|ZP_18791011.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE098]
gi|425415114|ref|ZP_18796764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK523]
gi|425421050|ref|ZP_18802281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 0.1288]
gi|425426270|ref|ZP_18807331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 0.1304]
gi|427803504|ref|ZP_18970571.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Escherichia coli chi7122]
gi|427808122|ref|ZP_18975187.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Escherichia coli]
gi|428951073|ref|ZP_19023219.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.1042]
gi|428956929|ref|ZP_19028639.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 89.0511]
gi|428963261|ref|ZP_19034457.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.0091]
gi|428969331|ref|ZP_19039973.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.0039]
gi|428975890|ref|ZP_19046071.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.2281]
gi|428981655|ref|ZP_19051401.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 93.0055]
gi|428987879|ref|ZP_19057179.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 93.0056]
gi|428993691|ref|ZP_19062606.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 94.0618]
gi|428999790|ref|ZP_19068308.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0183]
gi|429006032|ref|ZP_19073956.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.1288]
gi|429012377|ref|ZP_19079638.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0943]
gi|429018591|ref|ZP_19085384.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0428]
gi|429030581|ref|ZP_19096467.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0939]
gi|429036767|ref|ZP_19102216.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0932]
gi|429042639|ref|ZP_19107653.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0107]
gi|429048495|ref|ZP_19113155.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0003]
gi|429053858|ref|ZP_19118354.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.1742]
gi|429059551|ref|ZP_19123703.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0007]
gi|429064996|ref|ZP_19128865.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0672]
gi|429071563|ref|ZP_19134920.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0678]
gi|429722633|ref|ZP_19257531.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429774730|ref|ZP_19306733.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02030]
gi|429779993|ref|ZP_19311946.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429784045|ref|ZP_19315958.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02092]
gi|429789383|ref|ZP_19321258.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02093]
gi|429795613|ref|ZP_19327439.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02281]
gi|429801539|ref|ZP_19333317.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02318]
gi|429805171|ref|ZP_19336918.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02913]
gi|429809982|ref|ZP_19341684.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-03439]
gi|429815742|ref|ZP_19347401.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-04080]
gi|429821330|ref|ZP_19352943.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-03943]
gi|429824044|ref|ZP_19355561.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0109]
gi|429830412|ref|ZP_19361279.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0010]
gi|429907004|ref|ZP_19372973.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429911202|ref|ZP_19377158.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429917038|ref|ZP_19382978.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429922076|ref|ZP_19387997.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429927894|ref|ZP_19393800.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429931826|ref|ZP_19397721.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429933428|ref|ZP_19399318.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429939082|ref|ZP_19404956.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429946725|ref|ZP_19412580.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429949357|ref|ZP_19415205.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429957641|ref|ZP_19423470.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec12-0466]
gi|432352100|ref|ZP_19595409.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE2]
gi|432356781|ref|ZP_19600028.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE4]
gi|432361188|ref|ZP_19604385.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE5]
gi|432368416|ref|ZP_19611521.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE10]
gi|432371211|ref|ZP_19614275.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE11]
gi|432375520|ref|ZP_19618534.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE12]
gi|432380065|ref|ZP_19623029.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE15]
gi|432385894|ref|ZP_19628793.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE16]
gi|432390365|ref|ZP_19633229.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE21]
gi|432396311|ref|ZP_19639103.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE25]
gi|432400549|ref|ZP_19643309.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE26]
gi|432405307|ref|ZP_19648030.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE28]
gi|432410506|ref|ZP_19653189.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE39]
gi|432415389|ref|ZP_19658020.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE44]
gi|432420547|ref|ZP_19663105.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE178]
gi|432429586|ref|ZP_19672046.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE181]
gi|432430553|ref|ZP_19672998.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE187]
gi|432435082|ref|ZP_19677483.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE188]
gi|432439750|ref|ZP_19682113.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE189]
gi|432444874|ref|ZP_19687183.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE191]
gi|432453235|ref|ZP_19695475.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE193]
gi|432455365|ref|ZP_19697567.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE201]
gi|432459408|ref|ZP_19701572.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE204]
gi|432464449|ref|ZP_19706557.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE205]
gi|432469870|ref|ZP_19711923.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE206]
gi|432474457|ref|ZP_19716470.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE208]
gi|432479798|ref|ZP_19721763.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE210]
gi|432484165|ref|ZP_19726089.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE212]
gi|432492733|ref|ZP_19734572.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE213]
gi|432494306|ref|ZP_19736124.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE214]
gi|432498681|ref|ZP_19740461.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE216]
gi|432503145|ref|ZP_19744882.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE220]
gi|432512645|ref|ZP_19749888.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE224]
gi|432521074|ref|ZP_19758239.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE228]
gi|432522590|ref|ZP_19759729.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE230]
gi|432529805|ref|ZP_19766849.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE233]
gi|432541291|ref|ZP_19778166.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE235]
gi|432541813|ref|ZP_19778674.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE236]
gi|432547157|ref|ZP_19783954.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE237]
gi|432552445|ref|ZP_19789177.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE47]
gi|432557454|ref|ZP_19794147.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE49]
gi|432562347|ref|ZP_19798974.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE51]
gi|432567276|ref|ZP_19803803.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE53]
gi|432572432|ref|ZP_19808923.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE55]
gi|432579114|ref|ZP_19815548.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE56]
gi|432582548|ref|ZP_19818958.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE57]
gi|432586736|ref|ZP_19823108.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE58]
gi|432591556|ref|ZP_19827885.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE60]
gi|432596322|ref|ZP_19832611.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE62]
gi|432600954|ref|ZP_19837209.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE66]
gi|432606322|ref|ZP_19842518.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE67]
gi|432610171|ref|ZP_19846344.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE72]
gi|432615211|ref|ZP_19851346.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE75]
gi|432620540|ref|ZP_19856586.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE76]
gi|432626021|ref|ZP_19862006.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE77]
gi|432630007|ref|ZP_19865957.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE80]
gi|432635751|ref|ZP_19871637.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE81]
gi|432639556|ref|ZP_19875401.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE83]
gi|432644872|ref|ZP_19880675.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE86]
gi|432649965|ref|ZP_19885727.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE87]
gi|432654447|ref|ZP_19890166.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE93]
gi|432659679|ref|ZP_19895340.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE111]
gi|432664625|ref|ZP_19900221.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE116]
gi|432669369|ref|ZP_19904918.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE119]
gi|432678032|ref|ZP_19913458.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE142]
gi|432678859|ref|ZP_19914262.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE143]
gi|432684270|ref|ZP_19919589.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE156]
gi|432690327|ref|ZP_19925573.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE161]
gi|432693221|ref|ZP_19928436.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE162]
gi|432697754|ref|ZP_19932926.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE169]
gi|432703009|ref|ZP_19938135.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE171]
gi|432709268|ref|ZP_19944337.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE6]
gi|432712158|ref|ZP_19947210.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE8]
gi|432717449|ref|ZP_19952451.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE9]
gi|432722000|ref|ZP_19956927.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE17]
gi|432726546|ref|ZP_19961429.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE18]
gi|432731162|ref|ZP_19966001.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE45]
gi|432735963|ref|ZP_19970739.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE42]
gi|432740233|ref|ZP_19974955.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE23]
gi|432744374|ref|ZP_19979079.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE43]
gi|432748893|ref|ZP_19983516.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE29]
gi|432753234|ref|ZP_19987802.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE22]
gi|432758222|ref|ZP_19992745.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE46]
gi|432763728|ref|ZP_19998180.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE48]
gi|432769238|ref|ZP_20003611.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE50]
gi|432773617|ref|ZP_20007907.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE54]
gi|432777289|ref|ZP_20011543.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE59]
gi|432782345|ref|ZP_20016531.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE63]
gi|432786085|ref|ZP_20020253.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE65]
gi|432791686|ref|ZP_20025780.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE78]
gi|432797653|ref|ZP_20031681.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE79]
gi|432800720|ref|ZP_20034710.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE84]
gi|432804518|ref|ZP_20038464.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE91]
gi|432812549|ref|ZP_20046398.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE101]
gi|432813933|ref|ZP_20047744.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE115]
gi|432819756|ref|ZP_20053470.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE118]
gi|432825885|ref|ZP_20059542.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE123]
gi|432830425|ref|ZP_20064034.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE135]
gi|432833493|ref|ZP_20067041.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE136]
gi|432837986|ref|ZP_20071479.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE140]
gi|432842724|ref|ZP_20076145.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE141]
gi|432848215|ref|ZP_20080087.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE144]
gi|432859093|ref|ZP_20085267.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE146]
gi|432873099|ref|ZP_20092797.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE147]
gi|432879929|ref|ZP_20096749.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE154]
gi|432884403|ref|ZP_20099359.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE158]
gi|432893053|ref|ZP_20105158.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE165]
gi|432897224|ref|ZP_20108220.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE192]
gi|432902770|ref|ZP_20112450.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE194]
gi|432910123|ref|ZP_20117250.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE190]
gi|432917569|ref|ZP_20122100.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE173]
gi|432924874|ref|ZP_20127013.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE175]
gi|432932774|ref|ZP_20132628.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE184]
gi|432942310|ref|ZP_20139652.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE183]
gi|432945103|ref|ZP_20141398.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE196]
gi|432953570|ref|ZP_20145869.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE197]
gi|432959821|ref|ZP_20150107.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE202]
gi|432966548|ref|ZP_20155468.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE203]
gi|432970614|ref|ZP_20159492.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE207]
gi|432977159|ref|ZP_20165984.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE209]
gi|432979941|ref|ZP_20168722.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE211]
gi|432984129|ref|ZP_20172868.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE215]
gi|432989542|ref|ZP_20178212.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE217]
gi|432994232|ref|ZP_20182849.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE218]
gi|432998651|ref|ZP_20187191.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE223]
gi|433003963|ref|ZP_20192401.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE227]
gi|433011171|ref|ZP_20199576.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE229]
gi|433012611|ref|ZP_20200994.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE104]
gi|433017393|ref|ZP_20205664.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE105]
gi|433022184|ref|ZP_20210210.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE106]
gi|433027479|ref|ZP_20215355.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE109]
gi|433031873|ref|ZP_20219688.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE112]
gi|433037373|ref|ZP_20224994.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE113]
gi|433041917|ref|ZP_20229452.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE117]
gi|433046508|ref|ZP_20233940.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE120]
gi|433051736|ref|ZP_20238974.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE122]
gi|433056775|ref|ZP_20243862.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE124]
gi|433061654|ref|ZP_20248620.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE125]
gi|433066645|ref|ZP_20253489.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE128]
gi|433071486|ref|ZP_20258188.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE129]
gi|433076635|ref|ZP_20263201.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE131]
gi|433081384|ref|ZP_20267859.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE133]
gi|433086041|ref|ZP_20272445.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE137]
gi|433090761|ref|ZP_20277069.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE138]
gi|433095304|ref|ZP_20281520.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE139]
gi|433099985|ref|ZP_20286097.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE145]
gi|433104572|ref|ZP_20290595.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE148]
gi|433109689|ref|ZP_20295569.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE150]
gi|433114388|ref|ZP_20300204.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE153]
gi|433118986|ref|ZP_20304700.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE157]
gi|433124005|ref|ZP_20309596.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE160]
gi|433128765|ref|ZP_20314245.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE163]
gi|433133585|ref|ZP_20318968.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE166]
gi|433138066|ref|ZP_20323353.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE167]
gi|433142999|ref|ZP_20328178.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE168]
gi|433147894|ref|ZP_20332960.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE174]
gi|433152581|ref|ZP_20337551.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE176]
gi|433157380|ref|ZP_20342256.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE177]
gi|433162251|ref|ZP_20347016.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE179]
gi|433167226|ref|ZP_20351902.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE180]
gi|433172307|ref|ZP_20356867.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE232]
gi|433176883|ref|ZP_20361350.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE82]
gi|433181970|ref|ZP_20366273.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE85]
gi|433187242|ref|ZP_20371371.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE88]
gi|433192367|ref|ZP_20376389.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE90]
gi|433197024|ref|ZP_20380953.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE94]
gi|433201858|ref|ZP_20385670.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE95]
gi|433206587|ref|ZP_20390288.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE97]
gi|433211367|ref|ZP_20394982.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE99]
gi|442590116|ref|ZP_21008900.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|442596446|ref|ZP_21014257.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|442606706|ref|ZP_21021501.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
Nissle 1917]
gi|443616464|ref|YP_007380320.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
APEC O78]
gi|444922755|ref|ZP_21242478.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 09BKT078844]
gi|444929077|ref|ZP_21248231.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0814]
gi|444934427|ref|ZP_21253371.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0815]
gi|444940006|ref|ZP_21258655.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0816]
gi|444945649|ref|ZP_21264071.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0839]
gi|444951153|ref|ZP_21269379.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0848]
gi|444956607|ref|ZP_21274609.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1753]
gi|444961951|ref|ZP_21279705.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1775]
gi|444967642|ref|ZP_21285119.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1793]
gi|444973144|ref|ZP_21290427.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1805]
gi|444983978|ref|ZP_21300848.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA11]
gi|444989221|ref|ZP_21305963.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA19]
gi|444994575|ref|ZP_21311172.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA13]
gi|445000071|ref|ZP_21316535.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA2]
gi|445005527|ref|ZP_21321868.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA47]
gi|445010700|ref|ZP_21326894.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA48]
gi|445016482|ref|ZP_21332533.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA8]
gi|445021929|ref|ZP_21337852.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 7.1982]
gi|445027171|ref|ZP_21342951.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1781]
gi|445032666|ref|ZP_21348292.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1762]
gi|445038359|ref|ZP_21353830.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA35]
gi|445043574|ref|ZP_21358914.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 3.4880]
gi|445049146|ref|ZP_21364317.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0083]
gi|445054796|ref|ZP_21369749.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0670]
gi|450185742|ref|ZP_21889212.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SEPT362]
gi|450211060|ref|ZP_21894199.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O08]
gi|450239654|ref|ZP_21899081.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
S17]
gi|452969098|ref|ZP_21967325.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC4009]
gi|62288033|sp|P0A6G7.1|CLPP_ECOLI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Caseinolytic protease; AltName:
Full=Endopeptidase Clp; AltName: Full=Heat shock protein
F21.5; AltName: Full=Protease Ti; Flags: Precursor
gi|62288034|sp|P0A6G8.1|CLPP_ECOL6 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|62288035|sp|P0A6G9.1|CLPP_ECO57 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|62288036|sp|P0A6H0.1|CLPP_SHIFL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183183|sp|Q325G4.1|CLPP_SHIBS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183184|sp|Q32JJ3.1|CLPP_SHIDS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110816465|sp|Q3Z4W6.1|CLPP_SHISS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243134|sp|Q0TKK4.1|CLPP_ECOL5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|116243136|sp|Q1RF98.1|CLPP_ECOUT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|122957620|sp|Q0T7E6.1|CLPP_SHIF8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201821|sp|A1A8A6.1|CLPP_ECOK1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167008648|sp|A7ZIJ5.1|CLPP_ECO24 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167008649|sp|A7ZX95.1|CLPP_ECOHS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082457|sp|B1J011.1|CLPP_ECOLC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|310942734|pdb|3MT6|R Chain R, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942735|pdb|3MT6|S Chain S, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942736|pdb|3MT6|T Chain T, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942737|pdb|3MT6|U Chain U, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942738|pdb|3MT6|O Chain O, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942739|pdb|3MT6|P Chain P, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942740|pdb|3MT6|Q Chain Q, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942741|pdb|3MT6|Y Chain Y, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942742|pdb|3MT6|Z Chain Z, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942743|pdb|3MT6|AA Chain a, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942744|pdb|3MT6|BB Chain b, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942745|pdb|3MT6|V Chain V, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942746|pdb|3MT6|W Chain W, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942747|pdb|3MT6|X Chain X, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942748|pdb|3MT6|M Chain M, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942749|pdb|3MT6|L Chain L, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942750|pdb|3MT6|K Chain K, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942751|pdb|3MT6|J Chain J, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942752|pdb|3MT6|I Chain I, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942753|pdb|3MT6|H Chain H, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942754|pdb|3MT6|N Chain N, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942755|pdb|3MT6|F Chain F, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942756|pdb|3MT6|E Chain E, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942757|pdb|3MT6|D Chain D, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942758|pdb|3MT6|C Chain C, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942759|pdb|3MT6|B Chain B, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942760|pdb|3MT6|A Chain A, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942761|pdb|3MT6|G Chain G, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|12513299|gb|AAG54787.1|AE005223_2 ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Escherichia coli O157:H7 str.
EDL933]
gi|26106846|gb|AAN79031.1|AE016756_214 ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CFT073]
gi|145556|gb|AAA23588.1| ATP-dependent protease (clpP) [Escherichia coli]
gi|1773121|gb|AAB40193.1| ATP-dependent Clp proteinase [Escherichia coli]
gi|1786641|gb|AAC73540.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. MG1655]
gi|13359948|dbj|BAB33914.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli O157:H7 str. Sakai]
gi|30040183|gb|AAP15916.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Shigella flexneri 2a str.
2457T]
gi|56383209|gb|AAN42038.2| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Shigella flexneri 2a str. 301]
gi|73854489|gb|AAZ87196.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella sonnei Ss046]
gi|81239804|gb|ABB60514.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella dysenteriae Sd197]
gi|81244336|gb|ABB65044.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella boydii Sb227]
gi|85674577|dbj|BAE76217.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K12 substr. W3110]
gi|91071085|gb|ABE05966.1| ATP-dependent proteolytic subunit of clpA-ClpP serine protease,
heat shock protein F21.5 [Escherichia coli UTI89]
gi|110342290|gb|ABG68527.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
536]
gi|110614013|gb|ABF02680.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella flexneri 5 str. 8401]
gi|115511821|gb|ABI99895.1| ATP-dependent proteolytic subunit of ClpA-ClpP serine protease
[Escherichia coli APEC O1]
gi|157065644|gb|ABV04899.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli HS]
gi|157080329|gb|ABV20037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E24377A]
gi|169756118|gb|ACA78817.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli ATCC 8739]
gi|169887858|gb|ACB01565.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. DH10B]
gi|170520994|gb|ACB19172.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli SMS-3-5]
gi|187428295|gb|ACD07569.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii CDC 3083-94]
gi|187766815|gb|EDU30659.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4196]
gi|188487796|gb|EDU62899.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 53638]
gi|189003087|gb|EDU72073.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4076]
gi|189358046|gb|EDU76465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4401]
gi|189362475|gb|EDU80894.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4486]
gi|189373600|gb|EDU92016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC869]
gi|190905047|gb|EDV64714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli F11]
gi|192929158|gb|EDV82768.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E22]
gi|208729341|gb|EDZ78942.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4206]
gi|208732507|gb|EDZ81195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4045]
gi|208737157|gb|EDZ84841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4042]
gi|209743854|gb|ACI70234.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743856|gb|ACI70235.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743858|gb|ACI70236.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743860|gb|ACI70237.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743862|gb|ACI70238.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209910913|dbj|BAG75987.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE11]
gi|215263590|emb|CAS07920.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O127:H6 str. E2348/69]
gi|217322633|gb|EEC31057.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. TW14588]
gi|218350632|emb|CAU96324.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli 55989]
gi|218357436|emb|CAQ90075.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia fergusonii ATCC 35469]
gi|218359772|emb|CAQ97313.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli IAI1]
gi|218364116|emb|CAR01781.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli S88]
gi|218368637|emb|CAR16376.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli IAI39]
gi|218425865|emb|CAR06671.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli ED1a]
gi|218430818|emb|CAR11692.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli UMN026]
gi|222032232|emb|CAP74971.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
LF82]
gi|227838638|gb|EEJ49104.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
83972]
gi|238863325|gb|ACR65323.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli BW2952]
gi|242376218|emb|CAQ30909.1| clpP, subunit of ClpP serine protease, ClpAP, ClpXP and ClpAXP
[Escherichia coli BL21(DE3)]
gi|253325618|gb|ACT30220.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|253972407|gb|ACT38078.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli B
str. REL606]
gi|253976617|gb|ACT42287.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
BL21(DE3)]
gi|254591021|gb|ACT70382.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O157:H7 str. TW14359]
gi|257752309|dbj|BAI23811.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. 11368]
gi|257757785|dbj|BAI29282.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. 12009]
gi|257762954|dbj|BAI34449.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H- str. 11128]
gi|260450376|gb|ACX40798.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DH1]
gi|281177608|dbj|BAI53938.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE15]
gi|281599777|gb|ADA72761.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2002017]
gi|284920247|emb|CBG33306.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
042]
gi|290761217|gb|ADD55178.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. CB9615]
gi|291429411|gb|EFF02431.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1412]
gi|291471765|gb|EFF14248.1| Clp protease [Escherichia coli B354]
gi|294492533|gb|ADE91289.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli IHE3034]
gi|298280283|gb|EFI21787.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1302]
gi|299880021|gb|EFI88232.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 196-1]
gi|300404590|gb|EFJ88128.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 84-1]
gi|300414631|gb|EFJ97941.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 115-1]
gi|300452510|gb|EFK16130.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 116-1]
gi|300461832|gb|EFK25325.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 187-1]
gi|300527102|gb|EFK48171.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 119-7]
gi|300529122|gb|EFK50184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 107-1]
gi|300843357|gb|EFK71117.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 78-1]
gi|305853859|gb|EFM54298.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
NC101]
gi|306907687|gb|EFN38189.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli W]
gi|307552344|gb|ADN45119.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ABU 83972]
gi|307628093|gb|ADN72397.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UM146]
gi|308121483|gb|EFO58745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 145-7]
gi|309700698|emb|CBI99994.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
ETEC H10407]
gi|312945015|gb|ADR25842.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O83:H1 str. NRG 857C]
gi|315059717|gb|ADT74044.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli W]
gi|315135119|dbj|BAJ42278.1| conserved hypothetical protein [Escherichia coli DH1]
gi|320173743|gb|EFW48926.1| ATP-dependent Clp protease proteolytic subunit [Shigella
dysenteriae CDC 74-1112]
gi|320178281|gb|EFW53255.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii
ATCC 9905]
gi|320186067|gb|EFW60812.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
CDC 796-83]
gi|320192853|gb|EFW67493.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC1212]
gi|320197089|gb|EFW71708.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
WV_060327]
gi|320201681|gb|EFW76257.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
EC4100B]
gi|320638432|gb|EFX08146.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. G5101]
gi|320643812|gb|EFX12935.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. 493-89]
gi|320649163|gb|EFX17741.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. H 2687]
gi|320656056|gb|EFX23972.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320661206|gb|EFX28637.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. USDA 5905]
gi|320665182|gb|EFX32275.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. LSU-61]
gi|323379718|gb|ADX51986.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli KO11FL]
gi|323938623|gb|EGB34872.1| Clp protease [Escherichia coli E1520]
gi|323943244|gb|EGB39400.1| Clp protease [Escherichia coli E482]
gi|323945342|gb|EGB41398.1| Clp protease [Escherichia coli H120]
gi|323952951|gb|EGB48819.1| Clp protease [Escherichia coli H252]
gi|323958630|gb|EGB54333.1| Clp protease [Escherichia coli H263]
gi|323963427|gb|EGB58989.1| Clp protease [Escherichia coli H489]
gi|323965124|gb|EGB60583.1| Clp protease [Escherichia coli M863]
gi|323972291|gb|EGB67501.1| Clp protease [Escherichia coli TA007]
gi|323976078|gb|EGB71171.1| Clp protease [Escherichia coli TW10509]
gi|324114664|gb|EGC08632.1| Clp protease [Escherichia fergusonii B253]
gi|324116925|gb|EGC10838.1| Clp protease [Escherichia coli E1167]
gi|326341201|gb|EGD64993.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1044]
gi|326346024|gb|EGD69763.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1125]
gi|330910231|gb|EGH38741.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
AA86]
gi|331037755|gb|EGI09975.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H736]
gi|331045775|gb|EGI17901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M605]
gi|331051116|gb|EGI23168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M718]
gi|331054742|gb|EGI26751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA206]
gi|331060240|gb|EGI32204.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA143]
gi|331066016|gb|EGI37900.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA271]
gi|331070973|gb|EGI42332.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA280]
gi|331076167|gb|EGI47449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H591]
gi|331081034|gb|EGI52199.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H299]
gi|335577004|gb|EGM63237.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri J1713]
gi|338771515|gb|EGP26255.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
PCN033]
gi|340735696|gb|EGR64752.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 01-09591]
gi|340741501|gb|EGR75647.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. LB226692]
gi|341921032|gb|EGT70636.1| hypothetical protein C22711_4669 [Escherichia coli O104:H4 str.
C227-11]
gi|342362476|gb|EGU26594.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
XH140A]
gi|344193757|gb|EGV47835.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
XH001]
gi|349736547|gb|AEQ11253.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O7:K1 str. CE10]
gi|354858263|gb|EHF18714.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 04-8351]
gi|354860139|gb|EHF20586.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. C227-11]
gi|354866835|gb|EHF27258.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. C236-11]
gi|354877171|gb|EHF37531.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 09-7901]
gi|354879478|gb|EHF39816.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4404]
gi|354884065|gb|EHF44379.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-3677]
gi|354885866|gb|EHF46158.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4522]
gi|354888933|gb|EHF49187.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4623]
gi|354901534|gb|EHF61661.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354905765|gb|EHF65848.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354908272|gb|EHF68328.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354918744|gb|EHF78700.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|354922432|gb|EHF82347.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|355353088|gb|EHG02260.1| hypothetical protein i01_00596 [Escherichia coli cloneA_i1]
gi|355418925|gb|AER83122.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. 'clone D i2']
gi|355423845|gb|AER88041.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. 'clone D i14']
gi|359331197|dbj|BAL37644.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. MDS42]
gi|371594122|gb|EHN82994.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
H494]
gi|371595518|gb|EHN84367.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
TA124]
gi|371604298|gb|EHN92927.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
B093]
gi|371611430|gb|EHN99952.1| Clp protease [Escherichia coli H397]
gi|371612952|gb|EHO01455.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
E101]
gi|373248398|gb|EHP67828.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
4_1_47FAA]
gi|374357448|gb|AEZ39155.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. RM12579]
gi|375323616|gb|EHS69321.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H43 str. T22]
gi|377850929|gb|EHU15884.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1C]
gi|377854084|gb|EHU18974.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1B]
gi|377862760|gb|EHU27567.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1D]
gi|377866873|gb|EHU31637.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1E]
gi|377868228|gb|EHU32972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2A]
gi|377879179|gb|EHU43752.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2B]
gi|377883602|gb|EHU48120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2D]
gi|377885903|gb|EHU50394.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2C]
gi|377898425|gb|EHU62785.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2E]
gi|377900553|gb|EHU64885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3A]
gi|377914360|gb|EHU78483.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3C]
gi|377918753|gb|EHU82800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3D]
gi|377920840|gb|EHU84855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3E]
gi|377932504|gb|EHU96358.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3F]
gi|377934476|gb|EHU98307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4A]
gi|377940607|gb|EHV04356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4B]
gi|377951398|gb|EHV15017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4D]
gi|377955447|gb|EHV19003.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4E]
gi|377966083|gb|EHV29496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5A]
gi|377967396|gb|EHV30802.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4F]
gi|377973509|gb|EHV36849.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5B]
gi|377981472|gb|EHV44731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5D]
gi|377981714|gb|EHV44972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5C]
gi|377988579|gb|EHV51757.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5E]
gi|378000301|gb|EHV63375.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6A]
gi|378003854|gb|EHV66894.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6C]
gi|378014252|gb|EHV77158.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6D]
gi|378017176|gb|EHV80051.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6E]
gi|378018839|gb|EHV81685.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7A]
gi|378027887|gb|EHV90512.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7C]
gi|378032402|gb|EHV94983.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7D]
gi|378037735|gb|EHW00258.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7B]
gi|378042335|gb|EHW04784.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7E]
gi|378052755|gb|EHW15057.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8A]
gi|378057167|gb|EHW19402.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8B]
gi|378063094|gb|EHW25264.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8C]
gi|378069189|gb|EHW31284.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8D]
gi|378072756|gb|EHW34813.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8E]
gi|378081868|gb|EHW43816.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9A]
gi|378082738|gb|EHW44681.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9B]
gi|378090507|gb|EHW52344.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9C]
gi|378095202|gb|EHW56992.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9D]
gi|378102386|gb|EHW64063.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9E]
gi|378107900|gb|EHW69518.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10A]
gi|378116922|gb|EHW78440.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10B]
gi|378119411|gb|EHW80906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10C]
gi|378121706|gb|EHW83157.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10D]
gi|378134748|gb|EHW96069.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10E]
gi|378136536|gb|EHW97830.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11A]
gi|378139984|gb|EHX01214.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10F]
gi|378147352|gb|EHX08500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11B]
gi|378153094|gb|EHX14180.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11D]
gi|378157257|gb|EHX18299.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11C]
gi|378161713|gb|EHX22689.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11E]
gi|378175102|gb|EHX35921.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12A]
gi|378175608|gb|EHX36424.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12B]
gi|378177102|gb|EHX37903.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12C]
gi|378190584|gb|EHX51168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13A]
gi|378191144|gb|EHX51720.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12E]
gi|378191957|gb|EHX52531.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12D]
gi|378208329|gb|EHX68713.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13D]
gi|378209338|gb|EHX69712.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13C]
gi|378219877|gb|EHX80144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13E]
gi|378221927|gb|EHX82169.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14A]
gi|378226320|gb|EHX86507.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14B]
gi|378234469|gb|EHX94547.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14C]
gi|378237158|gb|EHX97185.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14D]
gi|380349368|gb|EIA37640.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SCI-07]
gi|383101824|gb|AFG39333.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
P12b]
gi|383394283|gb|AFH19241.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KO11FL]
gi|383403932|gb|AFH10175.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli W]
gi|383465981|gb|EID61002.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
5a str. M90T]
gi|385155302|gb|EIF17306.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O32:H37 str. P4]
gi|385539924|gb|EIF86751.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
M919]
gi|385704856|gb|EIG41928.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
B799]
gi|385712908|gb|EIG49847.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
H730]
gi|386141518|gb|EIG82668.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1.2741]
gi|386148905|gb|EIG95340.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 97.0246]
gi|386152506|gb|EIH03795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5.0588]
gi|386157483|gb|EIH13825.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 97.0259]
gi|386164349|gb|EIH26135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1.2264]
gi|386169627|gb|EIH36135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 96.0497]
gi|386170798|gb|EIH42851.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 99.0741]
gi|386177150|gb|EIH54629.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.2608]
gi|386186459|gb|EIH69175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 93.0624]
gi|386191817|gb|EIH80558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 4.0522]
gi|386193173|gb|EIH87472.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli JB1-95]
gi|386200482|gb|EIH99473.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 96.154]
gi|386209764|gb|EII20251.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 9.0111]
gi|386217407|gb|EII33896.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 4.0967]
gi|386225831|gb|EII48156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2.3916]
gi|386229558|gb|EII56913.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.3884]
gi|386236963|gb|EII68935.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2.4168]
gi|386242097|gb|EII79010.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.2303]
gi|386242421|gb|EII84156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3003]
gi|386247039|gb|EII93212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW07793]
gi|386252730|gb|EIJ02421.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli B41]
gi|386257287|gb|EIJ12778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 900105 (10e)]
gi|386794491|gb|AFJ27525.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
Xuzhou21]
gi|388341952|gb|EIL08029.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9534]
gi|388345221|gb|EIL11007.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H25 str. CVM9340]
gi|388346439|gb|EIL12156.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. CVM9450]
gi|388360312|gb|EIL24533.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9570]
gi|388361234|gb|EIL25368.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9545]
gi|388368621|gb|EIL32246.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9574]
gi|388377634|gb|EIL40429.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM9942]
gi|388379316|gb|EIL41986.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O26:H11 str. CVM10026]
gi|388383822|gb|EIL45570.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KD1]
gi|388394242|gb|EIL55545.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
541-15]
gi|388395246|gb|EIL56470.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KD2]
gi|388398327|gb|EIL59247.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
576-1]
gi|388406306|gb|EIL66712.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
541-1]
gi|388415406|gb|EIL75336.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
HM605]
gi|388420456|gb|EIL80148.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CUMT8]
gi|390650910|gb|EIN29283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1996]
gi|390652871|gb|EIN31043.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA517]
gi|390653352|gb|EIN31499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA505]
gi|390688660|gb|EIN63692.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA3]
gi|390708495|gb|EIN81715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA10]
gi|390710386|gb|EIN83408.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA15]
gi|390720217|gb|EIN92929.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA22]
gi|390733902|gb|EIO05463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA25]
gi|390733923|gb|EIO05482.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA24]
gi|390737013|gb|EIO08328.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA28]
gi|390752231|gb|EIO22077.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA31]
gi|390752793|gb|EIO22599.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA32]
gi|390778620|gb|EIO46377.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA42]
gi|390784219|gb|EIO51792.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA39]
gi|390785934|gb|EIO53476.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW06591]
gi|390794961|gb|EIO62246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW10246]
gi|390801804|gb|EIO68855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW11039]
gi|390810296|gb|EIO77057.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW07945]
gi|390812006|gb|EIO78691.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09109]
gi|390819575|gb|EIO85908.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW10119]
gi|390823101|gb|EIO89173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09098]
gi|390837270|gb|EIP01701.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4203]
gi|390840057|gb|EIP04116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4196]
gi|390842294|gb|EIP06148.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09195]
gi|390855692|gb|EIP18374.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW14301]
gi|390860042|gb|EIP22369.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4421]
gi|390860502|gb|EIP22816.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW14313]
gi|390871773|gb|EIP33153.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4422]
gi|390876375|gb|EIP37361.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4013]
gi|390886159|gb|EIP46297.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4402]
gi|390888188|gb|EIP48084.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4439]
gi|390895026|gb|EIP54516.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4436]
gi|390904066|gb|EIP63082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1738]
gi|390910613|gb|EIP69344.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4437]
gi|390911897|gb|EIP70578.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1734]
gi|390915105|gb|EIP73623.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4448]
gi|391254798|gb|EIQ13957.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2850-71]
gi|391256934|gb|EIQ16056.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri CCH060]
gi|391259221|gb|EIQ18296.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-1770]
gi|391268295|gb|EIQ27223.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-315]
gi|391273843|gb|EIQ32661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-404]
gi|391288799|gb|EIQ47298.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 3226-85]
gi|391289061|gb|EIQ47557.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 4444-74]
gi|391296907|gb|EIQ54983.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 4822-66]
gi|391306878|gb|EIQ64626.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 225-75]
gi|391309584|gb|EIQ67252.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPECa12]
gi|391315322|gb|EIQ72855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPEC C342-62]
gi|394390767|gb|EJE67727.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9602]
gi|394394615|gb|EJE71178.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10224]
gi|394399939|gb|EJE75900.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9634]
gi|394405883|gb|EJE80980.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9553]
gi|394409054|gb|EJE83641.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9455]
gi|394411993|gb|EJE86173.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10021]
gi|394431102|gb|EJF03345.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10030]
gi|394433365|gb|EJF05397.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM9952]
gi|397901491|gb|EJL17837.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 6603-63]
gi|397903014|gb|EJL19321.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei str. Moseley]
gi|404292798|gb|EJZ49589.1| ATP-dependent Clp protease proteolytic subunit [Escherichia sp.
1_1_43]
gi|404341888|gb|EJZ68290.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 1485-80]
gi|406779098|gb|AFS58522.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|407055680|gb|AFS75731.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2011C-3493]
gi|407063922|gb|AFS84969.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|408072549|gb|EKH06870.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA7]
gi|408076058|gb|EKH10287.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK920]
gi|408086071|gb|EKH19613.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA34]
gi|408090667|gb|EKH23938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA506]
gi|408095712|gb|EKH28677.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA507]
gi|408110228|gb|EKH42055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1999]
gi|408130322|gb|EKH60470.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE037]
gi|408141708|gb|EKH71163.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA4]
gi|408150524|gb|EKH79106.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA23]
gi|408153279|gb|EKH81674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA49]
gi|408158626|gb|EKH86743.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA45]
gi|408167182|gb|EKH94709.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TT12B]
gi|408172668|gb|EKH99731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MA6]
gi|408174740|gb|EKI01704.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5905]
gi|408187056|gb|EKI13037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli CB7326]
gi|408192241|gb|EKI17818.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC96038]
gi|408192338|gb|EKI17914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5412]
gi|408206225|gb|EKI31037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW00353]
gi|408232196|gb|EKI55447.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli N1]
gi|408233175|gb|EKI56310.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA38]
gi|408239305|gb|EKI62058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1735]
gi|408249177|gb|EKI71129.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1736]
gi|408259573|gb|EKI80732.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1846]
gi|408268456|gb|EKI88812.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1847]
gi|408270231|gb|EKI90440.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1848]
gi|408285341|gb|EKJ04371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1850]
gi|408288146|gb|EKJ06984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1856]
gi|408300617|gb|EKJ18302.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1862]
gi|408301169|gb|EKJ18823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1864]
gi|408310092|gb|EKJ27176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1865]
gi|408318281|gb|EKJ34496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1868]
gi|408318837|gb|EKJ35039.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1866]
gi|408331655|gb|EKJ46799.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1869]
gi|408337258|gb|EKJ51994.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE098]
gi|408338660|gb|EKJ53306.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1870]
gi|408347912|gb|EKJ62055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 0.1288]
gi|408350623|gb|EKJ64471.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK523]
gi|408353294|gb|EKJ66816.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 0.1304]
gi|408457121|gb|EKJ80922.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
AD30]
gi|408559047|gb|EKK35390.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 5.2239]
gi|408559378|gb|EKK35701.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 3.4870]
gi|408585478|gb|EKK60345.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0586]
gi|408590504|gb|EKK64979.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.2524]
gi|408592319|gb|EKK66711.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0833]
gi|408604556|gb|EKK78130.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0869]
gi|408605962|gb|EKK79442.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0416]
gi|408617328|gb|EKK90450.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0821]
gi|412961686|emb|CCK45593.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Escherichia coli chi7122]
gi|412968301|emb|CCJ42918.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Escherichia coli]
gi|421934149|gb|EKT91926.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CFSAN001630]
gi|421945317|gb|EKU02534.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CFSAN001629]
gi|421946795|gb|EKU03909.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CFSAN001632]
gi|427214751|gb|EKV84023.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.1042]
gi|427217281|gb|EKV86350.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 89.0511]
gi|427234000|gb|EKW01709.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.2281]
gi|427234232|gb|EKW01931.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.0039]
gi|427236318|gb|EKW03899.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.0091]
gi|427251581|gb|EKW18144.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 93.0056]
gi|427253203|gb|EKW19646.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 93.0055]
gi|427254457|gb|EKW20818.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 94.0618]
gi|427270575|gb|EKW35453.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0943]
gi|427271063|gb|EKW35912.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0183]
gi|427276296|gb|EKW40870.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.1288]
gi|427286631|gb|EKW50469.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0428]
gi|427293895|gb|EKW57115.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0939]
gi|427304913|gb|EKW67533.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0003]
gi|427306553|gb|EKW69072.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0932]
gi|427310961|gb|EKW73181.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0107]
gi|427321629|gb|EKW83308.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.1742]
gi|427322536|gb|EKW84167.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0007]
gi|427334773|gb|EKW95841.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0678]
gi|427336797|gb|EKW97746.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0672]
gi|429260204|gb|EKY43797.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0109]
gi|429261864|gb|EKY45256.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0010]
gi|429351546|gb|EKY88266.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02030]
gi|429352249|gb|EKY88965.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429353007|gb|EKY89716.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02092]
gi|429366920|gb|EKZ03521.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02093]
gi|429367831|gb|EKZ04423.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02281]
gi|429370326|gb|EKZ06892.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02318]
gi|429382713|gb|EKZ19177.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02913]
gi|429384946|gb|EKZ21400.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-03943]
gi|429385469|gb|EKZ21922.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-03439]
gi|429397162|gb|EKZ33509.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-04080]
gi|429399390|gb|EKZ35711.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429399698|gb|EKZ36018.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429410452|gb|EKZ46674.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429412352|gb|EKZ48549.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429419337|gb|EKZ55475.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429427896|gb|EKZ63976.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429434740|gb|EKZ70764.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429435564|gb|EKZ71582.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429440105|gb|EKZ76084.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429444705|gb|EKZ80650.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429451010|gb|EKZ86902.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec12-0466]
gi|429456502|gb|EKZ92347.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9941]
gi|430879591|gb|ELC02922.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE4]
gi|430880733|gb|ELC04008.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE2]
gi|430888882|gb|ELC11553.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE10]
gi|430891423|gb|ELC13959.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE5]
gi|430900424|gb|ELC22443.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE11]
gi|430901424|gb|ELC23392.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE12]
gi|430909943|gb|ELC31301.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE16]
gi|430912044|gb|ELC33295.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE15]
gi|430918693|gb|ELC39694.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE25]
gi|430922722|gb|ELC43469.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE21]
gi|430929269|gb|ELC49780.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE26]
gi|430932803|gb|ELC53222.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE28]
gi|430938442|gb|ELC58683.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE39]
gi|430943765|gb|ELC63871.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE44]
gi|430947421|gb|ELC67119.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE181]
gi|430947712|gb|ELC67409.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE178]
gi|430956175|gb|ELC74851.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE187]
gi|430966661|gb|ELC84024.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE188]
gi|430969560|gb|ELC86664.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE189]
gi|430974577|gb|ELC91500.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE193]
gi|430976249|gb|ELC93124.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE191]
gi|430985237|gb|ELD01843.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE201]
gi|430992492|gb|ELD08863.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE204]
gi|430997200|gb|ELD13467.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE205]
gi|430999937|gb|ELD16011.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE206]
gi|431010397|gb|ELD24745.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE208]
gi|431010815|gb|ELD25159.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE210]
gi|431013139|gb|ELD26873.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE213]
gi|431018567|gb|ELD31998.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE212]
gi|431027822|gb|ELD40867.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE214]
gi|431032275|gb|ELD44986.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE216]
gi|431042147|gb|ELD52639.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE220]
gi|431044965|gb|ELD55220.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE224]
gi|431045628|gb|ELD55858.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE228]
gi|431054710|gb|ELD64279.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE230]
gi|431057196|gb|ELD66666.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE233]
gi|431064545|gb|ELD73412.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE235]
gi|431078330|gb|ELD85388.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE236]
gi|431085330|gb|ELD91443.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE237]
gi|431087077|gb|ELD93082.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE47]
gi|431094507|gb|ELE00139.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE49]
gi|431099580|gb|ELE04600.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE51]
gi|431103109|gb|ELE07779.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE53]
gi|431108816|gb|ELE12787.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE56]
gi|431110770|gb|ELE14687.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE55]
gi|431119564|gb|ELE22563.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE57]
gi|431124016|gb|ELE26670.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE58]
gi|431133000|gb|ELE34998.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE60]
gi|431133989|gb|ELE35955.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE62]
gi|431140544|gb|ELE42310.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE67]
gi|431144001|gb|ELE45709.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE66]
gi|431151484|gb|ELE52499.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE72]
gi|431158151|gb|ELE58772.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE75]
gi|431162899|gb|ELE63339.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE76]
gi|431165156|gb|ELE65514.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE77]
gi|431174033|gb|ELE74094.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE81]
gi|431174526|gb|ELE74571.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE80]
gi|431184353|gb|ELE84111.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE86]
gi|431185131|gb|ELE84861.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE83]
gi|431193336|gb|ELE92672.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE87]
gi|431195632|gb|ELE94601.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE93]
gi|431203796|gb|ELF02386.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE111]
gi|431204693|gb|ELF03251.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE116]
gi|431207361|gb|ELF05618.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE142]
gi|431213759|gb|ELF11615.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE119]
gi|431225052|gb|ELF22261.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE143]
gi|431225241|gb|ELF22446.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE156]
gi|431230815|gb|ELF26585.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE161]
gi|431237363|gb|ELF32363.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE162]
gi|431246948|gb|ELF41191.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE169]
gi|431247140|gb|ELF41382.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE171]
gi|431252989|gb|ELF46503.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE6]
gi|431259673|gb|ELF52036.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE8]
gi|431267053|gb|ELF58586.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE9]
gi|431268362|gb|ELF59836.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE17]
gi|431276654|gb|ELF67674.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE18]
gi|431278566|gb|ELF69556.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE45]
gi|431286362|gb|ELF77188.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE23]
gi|431286851|gb|ELF77671.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE42]
gi|431295828|gb|ELF85560.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE43]
gi|431300631|gb|ELF90182.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE29]
gi|431305615|gb|ELF93936.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE22]
gi|431312008|gb|ELG00156.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE46]
gi|431313380|gb|ELG01353.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE48]
gi|431319278|gb|ELG06962.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE50]
gi|431320738|gb|ELG08368.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE54]
gi|431330863|gb|ELG18127.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE59]
gi|431332057|gb|ELG19300.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE63]
gi|431342016|gb|ELG29012.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE65]
gi|431342482|gb|ELG29461.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE78]
gi|431345873|gb|ELG32787.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE79]
gi|431351309|gb|ELG38099.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE84]
gi|431357441|gb|ELG44108.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE101]
gi|431357851|gb|ELG44517.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE91]
gi|431368952|gb|ELG55183.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE115]
gi|431370758|gb|ELG56551.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE118]
gi|431375269|gb|ELG60613.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE123]
gi|431380187|gb|ELG65087.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE135]
gi|431388655|gb|ELG72378.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE136]
gi|431391889|gb|ELG75493.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE140]
gi|431397252|gb|ELG80708.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE141]
gi|431402564|gb|ELG85876.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE144]
gi|431405200|gb|ELG88443.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE147]
gi|431408148|gb|ELG91340.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE146]
gi|431413553|gb|ELG96318.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE154]
gi|431419991|gb|ELH02325.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE158]
gi|431425505|gb|ELH07575.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE165]
gi|431430034|gb|ELH11868.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE192]
gi|431437415|gb|ELH18925.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE194]
gi|431447198|gb|ELH27940.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE190]
gi|431447442|gb|ELH28174.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE173]
gi|431449533|gb|ELH30106.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE175]
gi|431454778|gb|ELH35136.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE183]
gi|431456807|gb|ELH37150.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE184]
gi|431463011|gb|ELH43205.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE196]
gi|431470700|gb|ELH50597.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE197]
gi|431475909|gb|ELH55713.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE203]
gi|431478716|gb|ELH58461.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE202]
gi|431482263|gb|ELH61966.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE209]
gi|431485751|gb|ELH65408.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE207]
gi|431496562|gb|ELH76145.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE211]
gi|431498787|gb|ELH77972.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE217]
gi|431506266|gb|ELH84864.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE215]
gi|431509566|gb|ELH87815.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE218]
gi|431514220|gb|ELH92062.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE223]
gi|431517284|gb|ELH94806.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE227]
gi|431519383|gb|ELH96835.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE229]
gi|431535946|gb|ELI12281.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE104]
gi|431537563|gb|ELI13680.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE105]
gi|431541069|gb|ELI16519.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE106]
gi|431545989|gb|ELI20632.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE109]
gi|431555549|gb|ELI29389.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE113]
gi|431560180|gb|ELI33701.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE112]
gi|431560390|gb|ELI33904.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE117]
gi|431572897|gb|ELI45721.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE120]
gi|431574218|gb|ELI47000.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE124]
gi|431575871|gb|ELI48594.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE122]
gi|431588358|gb|ELI59643.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE125]
gi|431591180|gb|ELI62180.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE128]
gi|431593673|gb|ELI63965.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE129]
gi|431601212|gb|ELI70729.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE131]
gi|431606029|gb|ELI75413.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE133]
gi|431610203|gb|ELI79504.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE137]
gi|431615213|gb|ELI84343.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE138]
gi|431619874|gb|ELI88771.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE139]
gi|431622851|gb|ELI91536.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE145]
gi|431631766|gb|ELJ00072.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE150]
gi|431634596|gb|ELJ02837.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE148]
gi|431636888|gb|ELJ05007.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE153]
gi|431649335|gb|ELJ16693.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE157]
gi|431650108|gb|ELJ17445.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE160]
gi|431651635|gb|ELJ18874.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE163]
gi|431663400|gb|ELJ30162.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE166]
gi|431665035|gb|ELJ31762.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE167]
gi|431666687|gb|ELJ33314.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE168]
gi|431676787|gb|ELJ42870.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE174]
gi|431678637|gb|ELJ44633.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE176]
gi|431682066|gb|ELJ47835.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE177]
gi|431692289|gb|ELJ57727.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE179]
gi|431694181|gb|ELJ59566.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE180]
gi|431696252|gb|ELJ61439.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE232]
gi|431709788|gb|ELJ74236.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE88]
gi|431710588|gb|ELJ74962.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE82]
gi|431711866|gb|ELJ76173.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE85]
gi|431721843|gb|ELJ85835.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE90]
gi|431725793|gb|ELJ89632.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE94]
gi|431726374|gb|ELJ90184.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE95]
gi|431733143|gb|ELJ96584.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE97]
gi|431736022|gb|ELJ99364.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE99]
gi|441609774|emb|CCP94813.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|441655107|emb|CCQ00170.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|441712013|emb|CCQ07478.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
Nissle 1917]
gi|443420972|gb|AGC85876.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
APEC O78]
gi|444542453|gb|ELV21811.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0814]
gi|444550931|gb|ELV28949.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 09BKT078844]
gi|444551798|gb|ELV29674.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0815]
gi|444565090|gb|ELV41991.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0839]
gi|444567160|gb|ELV43930.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0816]
gi|444571479|gb|ELV47961.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0848]
gi|444582364|gb|ELV58158.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1753]
gi|444585162|gb|ELV60742.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1775]
gi|444586123|gb|ELV61644.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1793]
gi|444600469|gb|ELV75305.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA11]
gi|444608386|gb|ELV82919.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1805]
gi|444614923|gb|ELV89148.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA13]
gi|444615589|gb|ELV89793.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA19]
gi|444623578|gb|ELV97498.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA2]
gi|444632670|gb|ELW06225.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA48]
gi|444632891|gb|ELW06440.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA47]
gi|444637804|gb|ELW11169.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA8]
gi|444647984|gb|ELW20940.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 7.1982]
gi|444650090|gb|ELW22942.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1781]
gi|444654180|gb|ELW26874.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1762]
gi|444663161|gb|ELW35406.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA35]
gi|444667434|gb|ELW39472.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 3.4880]
gi|444672857|gb|ELW44543.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0083]
gi|444674580|gb|ELW46110.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0670]
gi|449322675|gb|EMD12658.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O08]
gi|449324923|gb|EMD14843.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SEPT362]
gi|449324967|gb|EMD14886.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
S17]
Length = 207
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQ 137
>gi|407472866|ref|YP_006787266.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
acidurici 9a]
gi|407049374|gb|AFS77419.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
acidurici 9a]
Length = 194
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++ L++A+ L+L+ ED +K I +YINS G G
Sbjct: 19 DIYSRLLKDRIIFISDEINDVTASLVVAQLLFLESEDPDKDIQMYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD M Y+KP + T C+G A A LL AGAKG R ALP++ +MI Q
Sbjct: 71 ITSGFAIYDTMQYIKPDVSTTCIGMAASMGAFLLAAGAKGKRFALPNAEVMIHQ 124
>gi|311280666|ref|YP_003942897.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cloacae SCF1]
gi|308749861|gb|ADO49613.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cloacae SCF1]
Length = 207
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQ 137
>gi|329122525|ref|ZP_08251109.1| ATP-dependent Clp protease, protease subunit [Haemophilus aegyptius
ATCC 11116]
gi|327473154|gb|EGF18577.1| ATP-dependent Clp protease, protease subunit [Haemophilus aegyptius
ATCC 11116]
Length = 211
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 76/143 (53%), Gaps = 11/143 (7%)
Query: 66 SFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFL 125
SF + + VI MV+ TS + D+ S L K R+++L + LI+A+ L
Sbjct: 11 SFNEKGKKMSVIPMVVEQTSRG---ERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLL 67
Query: 126 YLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAA 185
+L+ ED K I +YINS G G T AIYD M ++KP I TLC+G A A
Sbjct: 68 FLESEDPTKDINIYINSPG--------GSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGA 119
Query: 186 LLLGAGAKGNRAALPSSTIMIKQ 208
LL G G RAALP++ +MI Q
Sbjct: 120 FLLAGGTAGKRAALPNARVMIHQ 142
>gi|423557331|ref|ZP_17533634.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MC67]
gi|401193139|gb|EJR00146.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MC67]
Length = 193
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ +D EK I++YINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQ 124
>gi|282883083|ref|ZP_06291683.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
lacrimalis 315-B]
gi|300813694|ref|ZP_07094016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 836 str. F0141]
gi|281297060|gb|EFA89556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
lacrimalis 315-B]
gi|300512236|gb|EFK39414.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 836 str. F0141]
Length = 194
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++ ++ +LI+A+ L+L+ ED K I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFASGEVNDTMADLIVAQLLFLESEDPNKDIQLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M Y+KP + T+C+G A A+LL +GAKG R ALP+S IMI Q
Sbjct: 71 VSAGLAIYDTMQYIKPDVSTICIGMAASMGAILLSSGAKGKRFALPNSDIMIHQ 124
>gi|229014309|ref|ZP_04171428.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
DSM 2048]
gi|229099577|ref|ZP_04230505.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-29]
gi|229105752|ref|ZP_04236381.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-28]
gi|229118641|ref|ZP_04247993.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-3]
gi|407707620|ref|YP_006831205.1| proton-translocating NADH-quinone oxidoreductase subunit L
[Bacillus thuringiensis MC28]
gi|423377055|ref|ZP_17354339.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1O-2]
gi|423440156|ref|ZP_17417062.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4X2-1]
gi|423449686|ref|ZP_17426565.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5O-1]
gi|423463229|ref|ZP_17439997.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6O-1]
gi|423471294|ref|ZP_17448038.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6O-2]
gi|423490288|ref|ZP_17466970.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BtB2-4]
gi|423496012|ref|ZP_17472656.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
CER057]
gi|423497194|ref|ZP_17473811.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
CER074]
gi|423521016|ref|ZP_17497489.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA4-10]
gi|423532582|ref|ZP_17509000.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB2-9]
gi|423542155|ref|ZP_17518545.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB4-10]
gi|423548388|ref|ZP_17524746.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB5-5]
gi|423597605|ref|ZP_17573605.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD078]
gi|423613267|ref|ZP_17589127.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD107]
gi|423619156|ref|ZP_17594989.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD115]
gi|423621820|ref|ZP_17597598.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD148]
gi|423660050|ref|ZP_17635219.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM022]
gi|228664833|gb|EEL20323.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-3]
gi|228677641|gb|EEL31889.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-28]
gi|228683873|gb|EEL37823.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-29]
gi|228746909|gb|EEL96793.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
DSM 2048]
gi|401127967|gb|EJQ35674.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5O-1]
gi|401149848|gb|EJQ57315.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
CER057]
gi|401162914|gb|EJQ70267.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
CER074]
gi|401169492|gb|EJQ76738.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB4-10]
gi|401176062|gb|EJQ83260.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB5-5]
gi|401180113|gb|EJQ87276.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA4-10]
gi|401239137|gb|EJR45569.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD078]
gi|401242429|gb|EJR48804.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD107]
gi|401251869|gb|EJR58139.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD115]
gi|401262849|gb|EJR68986.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD148]
gi|401303711|gb|EJS09272.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM022]
gi|401639657|gb|EJS57394.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1O-2]
gi|402419927|gb|EJV52199.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4X2-1]
gi|402422100|gb|EJV54342.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6O-1]
gi|402429967|gb|EJV62049.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BtB2-4]
gi|402432774|gb|EJV64830.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6O-2]
gi|402464836|gb|EJV96524.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB2-9]
gi|407385305|gb|AFU15806.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis MC28]
Length = 193
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ +D EK I++YINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQ 124
>gi|193214418|ref|YP_001995617.1| endopeptidase Clp [Chloroherpeton thalassium ATCC 35110]
gi|193087895|gb|ACF13170.1| Endopeptidase Clp [Chloroherpeton thalassium ATCC 35110]
Length = 226
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 13/142 (9%)
Query: 70 SKPRSPVITMVIPF---TSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLY 126
S+ S + M++P TSG + D+ S L + RI++LG LI+A+ +Y
Sbjct: 19 SRTESSINNMLVPMVIETSGRG--ERAFDIFSRLLRERIIFLGTPIDDHSASLIMAQLIY 76
Query: 127 LQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAAL 186
L+ ED E+ I++YINS G G + +YD M Y++P + T+CVG A A
Sbjct: 77 LESEDPERDIFMYINSPG--------GSVSAGLGLYDTMQYIRPDVSTVCVGMAASMGAF 128
Query: 187 LLGAGAKGNRAALPSSTIMIKQ 208
LL +G G RA+LP S IMI Q
Sbjct: 129 LLASGTAGKRASLPHSRIMIHQ 150
>gi|432532626|ref|ZP_19769626.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE234]
gi|431063818|gb|ELD73032.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE234]
Length = 207
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQ 137
>gi|229164087|ref|ZP_04292023.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
gi|228619323|gb|EEK76213.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
Length = 193
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ +D EK I++YINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQ 124
>gi|334139130|ref|ZP_08512526.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
gi|333603020|gb|EGL14444.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
Length = 200
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V I+A+ L+L +D +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTPVNDQVANAIIAQLLFLDAQDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++K + T+CVG A A LL AGAKG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKSDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQ 124
>gi|256828014|ref|YP_003156742.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfomicrobium baculatum DSM 4028]
gi|256577190|gb|ACU88326.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfomicrobium baculatum DSM 4028]
Length = 198
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V I A+ L+L+ E+ EK IY+YINS G G
Sbjct: 20 DIYSRLLKDRIVLLGTPIDDHVANSICAQLLFLESENPEKQIYMYINSPG--------GA 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+ P+ TLC+G A AA+LL AG KG R LP S IMI Q
Sbjct: 72 VTAGMAIYDTMQYISAPVATLCIGQAASMAAVLLAAGEKGMRYTLPHSRIMIHQ 125
>gi|430375836|ref|ZP_19430239.1| ATP-dependent Clp protease proteolytic subunit [Moraxella macacae
0408225]
gi|429541067|gb|ELA09095.1| ATP-dependent Clp protease proteolytic subunit [Moraxella macacae
0408225]
Length = 213
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 79/142 (55%), Gaps = 11/142 (7%)
Query: 67 FCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLY 126
F S+ ++ ++ MVI +A + D+ S L + R+++L + LI+A+ L+
Sbjct: 10 FANSQVKNALVPMVI---EQSARGERSFDIYSRLLRERVIFLTAEVEDHMANLIVAQLLF 66
Query: 127 LQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAAL 186
L+ ++ EK I+LYINS G G T AIYD M ++KP + T+C+G A A
Sbjct: 67 LEADNPEKDIHLYINSPG--------GVVTAGMAIYDTMNFIKPDVSTICLGQAASMGAF 118
Query: 187 LLGAGAKGNRAALPSSTIMIKQ 208
LL AG KG R AL +S +MI Q
Sbjct: 119 LLSAGTKGKRYALKNSRVMIHQ 140
>gi|406872664|gb|EKD23092.1| hypothetical protein ACD_83C00060G0001 [uncultured bacterium]
Length = 201
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
+ + + D+ S L K+RI+++G + LI+A+ L+L ED K I LYINS G
Sbjct: 14 SQYGERAYDIYSRLLKDRIIFIGDVIDDEIANLIIAQLLFLASEDSSKDIQLYINSPG-- 71
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G + AI+D M YVKP + T+C+G A A LL AG KG R ALP+S ++I
Sbjct: 72 ------GSVSAGLAIFDTMNYVKPDVSTMCIGMAASMGAFLLAAGKKGKRLALPNSKVLI 125
Query: 207 KQ 208
Q
Sbjct: 126 HQ 127
>gi|417230125|ref|ZP_12031711.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5.0959]
gi|386206615|gb|EII11121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5.0959]
Length = 207
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQ 137
>gi|357168023|ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial-like [Brachypodium distachyon]
Length = 300
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 73/133 (54%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ MVI TS D+ S L K RIV + L++A+ L+L+ E+ KP
Sbjct: 77 LVPMVIEHTSRGERAY---DIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPAKP 133
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I+LYINS G G T AIYD M Y++ P+ TLC+G A +LLL AGA G
Sbjct: 134 IHLYINSPG--------GVVTAGLAIYDTMQYIRSPVTTLCIGQAASMGSLLLAAGAPGE 185
Query: 196 RAALPSSTIMIKQ 208
R ALP++ +MI Q
Sbjct: 186 RRALPNARVMIHQ 198
>gi|325291111|ref|YP_004267292.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophobotulus glycolicus DSM 8271]
gi|324966512|gb|ADY57291.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophobotulus glycolicus DSM 8271]
Length = 202
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + LI+A+ L+L ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGQVDDYMANLIVAQLLFLDAEDPEKDIFLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M +V+ + T+CVG A A LL +GAKG R ALP+S I+I Q
Sbjct: 72 ISAGMAIYDTMQHVRADVHTICVGLAASMGAFLLASGAKGKRTALPNSEILIHQ 125
>gi|86159772|ref|YP_466557.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Anaeromyxobacter dehalogenans 2CP-C]
gi|220918591|ref|YP_002493895.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter dehalogenans 2CP-1]
gi|115311353|sp|Q2IEW1.1|CLPP_ANADE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763782|sp|B8J5G7.1|CLPP_ANAD2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|85776283|gb|ABC83120.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Anaeromyxobacter dehalogenans 2CP-C]
gi|219956445|gb|ACL66829.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter dehalogenans 2CP-1]
Length = 203
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V +I+A+ L+L+ ED +K I LYINS G G
Sbjct: 21 DIYSRLLKDRIIFLGTPVDDDVANVIIAQLLFLESEDPDKDINLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKP + T+C+G A A LL GA G R A+P++ IMI Q
Sbjct: 73 VTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARIMIHQ 126
>gi|283784263|ref|YP_003364128.1| ATP-dependent clp protease proteolytic subunit [Citrobacter
rodentium ICC168]
gi|448236261|ref|YP_001571487.2| ClpP-like protease [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|282947717|emb|CBG87272.1| ATP-dependent clp protease proteolytic subunit [Citrobacter
rodentium ICC168]
Length = 207
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQ 137
>gi|448241757|ref|YP_007405810.1| ATP-dependent Clp protease proteolytic subunit [Serratia marcescens
WW4]
gi|445212121|gb|AGE17791.1| ATP-dependent Clp protease proteolytic subunit [Serratia marcescens
WW4]
Length = 197
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T+ + D+ S L ++RIV+L V E++ A+ L+L+ E+ EKPI+
Sbjct: 6 MLVPMVVEQTSRGERSFDIYSRLLRDRIVFLNGEVNDDVAEMLCAQLLFLEAENPEKPIH 65
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y++ P+ TLC+G A + LL AG G+R
Sbjct: 66 LYINSPG--------GVITSGLAIYDTMQYIRAPVHTLCMGTARSMGSFLLMAGESGHRM 117
Query: 198 ALPSSTIMIKQ 208
ALP++++ + Q
Sbjct: 118 ALPNASLHVHQ 128
>gi|374583503|ref|ZP_09656597.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus youngiae DSM 17734]
gi|374419585|gb|EHQ92020.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus youngiae DSM 17734]
Length = 205
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + V LI+A+ L+L+ ED EK I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGAIDADVANLIVAQMLFLEAEDPEKDINLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y++ + T+C+G A A LL +G KG R ALP+S ++I Q
Sbjct: 72 ITAGMAIYDTMQYIRSDVRTICIGMAASMGAFLLASGTKGKRVALPNSEVLIHQ 125
>gi|348028491|ref|YP_004871177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Glaciecola
nitratireducens FR1064]
gi|347945834|gb|AEP29184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Glaciecola
nitratireducens FR1064]
Length = 210
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 11/139 (7%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
++P S ++ MV+ TA + D+ S L K ++++ + LI+A+ L+L+
Sbjct: 6 TEPHSALVPMVV---EQTARGERSYDIYSRLLKENVIFMVGQVEDHMANLIVAQMLFLEA 62
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK I+LYINS G G T AIYD M ++KP + T+C+G A A LL
Sbjct: 63 ENPEKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTVCIGQAASMGAFLLS 114
Query: 190 AGAKGNRAALPSSTIMIKQ 208
AGAKG R LP++ +MI Q
Sbjct: 115 AGAKGKRYCLPNARVMIHQ 133
>gi|283797647|ref|ZP_06346800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. M62/1]
gi|291074652|gb|EFE12016.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium sp. M62/1]
gi|295092868|emb|CBK78975.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
cf. saccharolyticum K10]
gi|295114657|emb|CBL35504.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[butyrate-producing bacterium SM4/1]
Length = 193
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
++P+ T+ + D+ S L K RIV+LG LI+A+ L+L+ ED K I+L
Sbjct: 3 LVPYVIESTSRGERSYDIFSRLLKERIVFLGEEVTDVSASLIVAQLLFLESEDPNKDIHL 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T AIYD M Y+K + T+CVG A A LL GAKG R A
Sbjct: 63 YINSPG--------GSVTAGMAIYDTMNYIKCDVSTICVGMAASMGAFLLAGGAKGKRLA 114
Query: 199 LPSSTIMIKQ 208
LP++ +MI Q
Sbjct: 115 LPNAEVMIHQ 124
>gi|157146946|ref|YP_001454265.1| hypothetical protein CKO_02723 [Citrobacter koseri ATCC BAA-895]
gi|157084151|gb|ABV13829.1| hypothetical protein CKO_02723 [Citrobacter koseri ATCC BAA-895]
Length = 243
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 44 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 97
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 98 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 149
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 150 AFLLTAGAKGKRFCLPNSRVMIHQ 173
>gi|436653600|ref|ZP_20516817.1| ATP-dependent Clp protease, proteolytic subunit ClpP, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE30663]
gi|435025338|gb|ELM15494.1| ATP-dependent Clp protease, proteolytic subunit ClpP, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE30663]
Length = 225
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 30 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 86
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 87 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 138
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 139 AKGKRFCLPNSRVMIHQ 155
>gi|428307443|ref|YP_007144268.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
gi|428248978|gb|AFZ14758.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
Length = 228
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 74/135 (54%), Gaps = 11/135 (8%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
S VI MV+ T + D+ S L + RI+++G +V + ++A+ L+L+ ED E
Sbjct: 23 SNVIPMVV---EQTGLGERAFDIYSRLLRERIIFMGTPVDDTVADSLVAQLLFLESEDPE 79
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
K I LYINS G G T AIYD M ++P + T+C G A A LL GAK
Sbjct: 80 KDIQLYINSPG--------GSVTAGMAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGAK 131
Query: 194 GNRAALPSSTIMIKQ 208
G R ALPSS IMI Q
Sbjct: 132 GKRMALPSSRIMIHQ 146
>gi|423394662|ref|ZP_17371863.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-1]
gi|423405531|ref|ZP_17382680.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-3]
gi|401657444|gb|EJS74954.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-1]
gi|401661147|gb|EJS78617.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-3]
Length = 193
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ +D EK I++YINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQ 124
>gi|423369117|ref|ZP_17346548.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD142]
gi|401078473|gb|EJP86784.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD142]
Length = 193
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ +D EK I++YINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQ 124
>gi|428775586|ref|YP_007167373.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
gi|428689865|gb|AFZ43159.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
Length = 199
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + LI+A+ LYL+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVDDEIANLIVAQMLYLEAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ I+D M ++P + T+C+G A A LL AG KG R +LP S IMI Q
Sbjct: 69 VSAGLGIFDTMNQIRPDVSTICLGLAASMGAFLLSAGEKGKRLSLPHSRIMIHQ 122
>gi|385810287|ref|YP_005846683.1| ATP-dependent Clp protease catalytic subunit [Ignavibacterium album
JCM 16511]
gi|383802335|gb|AFH49415.1| ATP-dependent Clp protease catalytic subunit [Ignavibacterium album
JCM 16511]
Length = 206
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 69/120 (57%), Gaps = 8/120 (6%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV++G + L +A+ ++L+ ED EK I++YINS G G
Sbjct: 27 DIYSRLLRERIVFIGTPIDDHIASLTIAQLIFLEAEDPEKDIHIYINSPG--------GS 78
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQAGDTGI 214
T AIYD M ++KP + T+CVG A AA+LL G KG R ALP S I+I Q GI
Sbjct: 79 VTAGLAIYDTMRFIKPDVSTICVGMAASMAAVLLAGGTKGKRFALPHSKILIHQPWTQGI 138
>gi|386748125|ref|YP_006221333.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
cetorum MIT 99-5656]
gi|384554367|gb|AFI06123.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
cetorum MIT 99-5656]
Length = 195
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 71/129 (55%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ T + D+ S L K+RI+ L SV I+A+ L+L+ ED EK I LY
Sbjct: 4 IPYVVEKTGRGERSYDIYSRLLKDRIILLSGEINDSVASSIVAQLLFLEAEDPEKDISLY 63
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T F+IYD M +++P + T+C+G A A LL GAKG R +L
Sbjct: 64 INSPG--------GVVTSGFSIYDTMNFIRPDVCTICIGQAASMGAFLLSCGAKGKRFSL 115
Query: 200 PSSTIMIKQ 208
P S IMI Q
Sbjct: 116 PHSRIMIHQ 124
>gi|242240292|ref|YP_002988473.1| ATP-dependent Clp protease proteolytic subunit ClpP [Dickeya
dadantii Ech703]
gi|242132349|gb|ACS86651.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya
dadantii Ech703]
Length = 207
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
K P ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 9 KQTPHMALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDYMANLIVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
AGAKG R LP+S +MI Q
Sbjct: 118 TAGAKGKRFCLPNSRVMIHQ 137
>gi|237707568|ref|ZP_04538049.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
sp. 3_2_53FAA]
gi|332281588|ref|ZP_08394001.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Shigella sp.
D9]
gi|226898778|gb|EEH85037.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
sp. 3_2_53FAA]
gi|332103940|gb|EGJ07286.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Shigella sp.
D9]
Length = 227
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 28 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 81
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 82 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 133
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 134 AFLLTAGAKGKRFCLPNSRVMIHQ 157
>gi|209546440|ref|YP_002278330.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209539297|gb|ACI59230.1| Endopeptidase Clp [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 203
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+L +V+ L+ A+ L+L+ E+ +KPIYLYINS G G
Sbjct: 23 DIYSRLLRERIVFLNGEVNDTVSALVCAQLLFLEAENPKKPIYLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T A+YD M Y++ P+ TLC+G A + LL AG G RAALP+++I+I Q
Sbjct: 75 VTSGLAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGERAALPNASILIHQ 128
>gi|30023185|ref|NP_834816.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 14579]
gi|47567358|ref|ZP_00238071.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9241]
gi|49481130|ref|YP_039138.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|52140414|ref|YP_086415.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
E33L]
gi|75759660|ref|ZP_00739744.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|118480187|ref|YP_897338.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis str. Al Hakam]
gi|190015186|ref|YP_001966706.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus]
gi|190015451|ref|YP_001967031.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus]
gi|190015619|ref|YP_001967344.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus]
gi|196032944|ref|ZP_03100357.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus W]
gi|196039610|ref|ZP_03106915.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NVH0597-99]
gi|196045601|ref|ZP_03112831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB108]
gi|206970378|ref|ZP_03231331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH1134]
gi|208702014|ref|YP_002267309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus H3081.97]
gi|217956873|ref|YP_002335967.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH187]
gi|217962631|ref|YP_002341203.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH187]
gi|218231097|ref|YP_002369926.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
B4264]
gi|218848317|ref|YP_002455085.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|218900271|ref|YP_002448682.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
G9842]
gi|218906323|ref|YP_002454157.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH820]
gi|222098603|ref|YP_002532661.1| ATP-dependent clp protease proteolytic subunit [Bacillus cereus Q1]
gi|225867113|ref|YP_002752491.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB102]
gi|228903623|ref|ZP_04067744.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
gi|228910978|ref|ZP_04074786.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 200]
gi|228917753|ref|ZP_04081294.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228923875|ref|ZP_04087152.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228930150|ref|ZP_04093159.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228936434|ref|ZP_04099232.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228942286|ref|ZP_04104825.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228948867|ref|ZP_04111142.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228955388|ref|ZP_04117393.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228961377|ref|ZP_04122991.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228968242|ref|ZP_04129240.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228975215|ref|ZP_04135773.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228981853|ref|ZP_04142148.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis Bt407]
gi|228988373|ref|ZP_04148465.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229072597|ref|ZP_04205799.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F65185]
gi|229082356|ref|ZP_04214819.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-2]
gi|229087619|ref|ZP_04219749.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-44]
gi|229094242|ref|ZP_04225321.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-42]
gi|229112558|ref|ZP_04242095.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-15]
gi|229124654|ref|ZP_04253836.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
95/8201]
gi|229130395|ref|ZP_04259353.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-Cer4]
gi|229147676|ref|ZP_04276019.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST24]
gi|229153305|ref|ZP_04281483.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1550]
gi|229158714|ref|ZP_04286772.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 4342]
gi|229164770|ref|ZP_04292604.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
gi|229181405|ref|ZP_04308733.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
172560W]
gi|229187359|ref|ZP_04314502.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BGSC 6E1]
gi|229193390|ref|ZP_04320339.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
gi|254724422|ref|ZP_05186206.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. A1055]
gi|296505568|ref|YP_003667268.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis BMB171]
gi|301056609|ref|YP_003794820.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
biovar anthracis str. CI]
gi|365162906|ref|ZP_09359029.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus sp.
7_6_55CFAA_CT2]
gi|375287157|ref|YP_005107596.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NC7401]
gi|376258514|ref|YP_005150236.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
NC7401]
gi|376269038|ref|YP_005121750.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F837/76]
gi|384182975|ref|YP_005568737.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|384189233|ref|YP_005575129.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar chinensis CT-43]
gi|402563256|ref|YP_006605980.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis HD-771]
gi|410677561|ref|YP_006929932.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus
thuringiensis Bt407]
gi|423355628|ref|ZP_17333252.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
IS075]
gi|423356394|ref|ZP_17334004.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
IS075]
gi|423363017|ref|ZP_17340517.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD022]
gi|423375306|ref|ZP_17352643.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
AND1407]
gi|423386632|ref|ZP_17363887.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1X1-2]
gi|423411112|ref|ZP_17388232.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3O-2]
gi|423427236|ref|ZP_17404267.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-2]
gi|423433103|ref|ZP_17410107.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4O-1]
gi|423438545|ref|ZP_17415526.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4X12-1]
gi|423506972|ref|ZP_17483561.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HD73]
gi|423527041|ref|ZP_17503486.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB1-1]
gi|423554402|ref|ZP_17530728.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
ISP3191]
gi|423565981|ref|ZP_17542256.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A1]
gi|423571713|ref|ZP_17547953.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A12]
gi|423572165|ref|ZP_17548378.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A12]
gi|423573202|ref|ZP_17549321.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-D12]
gi|423578071|ref|ZP_17554189.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-D12]
gi|423583301|ref|ZP_17559412.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD014]
gi|423588968|ref|ZP_17565054.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD045]
gi|423608514|ref|ZP_17584406.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD102]
gi|423608923|ref|ZP_17584814.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD102]
gi|423631886|ref|ZP_17607633.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD154]
gi|423634004|ref|ZP_17609657.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD156]
gi|423644305|ref|ZP_17619922.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD166]
gi|423650994|ref|ZP_17626564.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD169]
gi|423658059|ref|ZP_17633358.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD200]
gi|434378268|ref|YP_006612912.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis HD-789]
gi|449092201|ref|YP_007424642.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. HD73]
gi|452201640|ref|YP_007481721.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|67460463|sp|Q631K2.1|CLPP2_BACCZ RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|67460476|sp|Q6HBD8.1|CLPP2_BACHK RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|67460524|sp|Q815J6.1|CLPP2_BACCR RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|17981472|gb|AAL51030.1|AF454757_1 ClpP1 [Bacillus thuringiensis]
gi|29898745|gb|AAP12017.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 14579]
gi|47555979|gb|EAL14317.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9241]
gi|49332686|gb|AAT63332.1| ATP-dependent Clp protease, proteolytic subunit (endopeptidase Clp)
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|51973883|gb|AAU15433.1| ATP-dependent Clp protease, proteolytic subunit (endopeptidase Clp)
[Bacillus cereus E33L]
gi|74492856|gb|EAO55988.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|116584526|gb|ABK00643.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus]
gi|116584862|gb|ABK00977.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus]
gi|116585132|gb|ABK01241.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus]
gi|118419412|gb|ABK87831.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
thuringiensis str. Al Hakam]
gi|195994373|gb|EDX58328.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus W]
gi|196023432|gb|EDX62109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB108]
gi|196029770|gb|EDX68372.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NVH0597-99]
gi|206734955|gb|EDZ52124.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH1134]
gi|208657869|gb|ACI30239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus H3081.97]
gi|217064081|gb|ACJ78331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH187]
gi|217068436|gb|ACJ82684.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH187]
gi|218159054|gb|ACK59046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus B4264]
gi|218536274|gb|ACK88672.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|218540368|gb|ACK92764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|218541218|gb|ACK93612.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9842]
gi|221242662|gb|ACM15372.1| ATP-dependent Clp protease, proteolytic subunit (endopeptidase Clp)
[Bacillus cereus Q1]
gi|225789761|gb|ACO29978.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB102]
gi|228590104|gb|EEK47974.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
gi|228596063|gb|EEK53740.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BGSC 6E1]
gi|228601980|gb|EEK59473.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
172560W]
gi|228618700|gb|EEK75692.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
gi|228624698|gb|EEK81467.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 4342]
gi|228629909|gb|EEK86560.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1550]
gi|228635689|gb|EEK92176.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST24]
gi|228653094|gb|EEL08974.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-Cer4]
gi|228658805|gb|EEL14463.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
95/8201]
gi|228670938|gb|EEL26245.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-15]
gi|228689234|gb|EEL43056.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-42]
gi|228695735|gb|EEL48590.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-44]
gi|228700788|gb|EEL53311.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-2]
gi|228710573|gb|EEL62546.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F65185]
gi|228771354|gb|EEM19828.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228777965|gb|EEM26237.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis Bt407]
gi|228784494|gb|EEM32515.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228791415|gb|EEM39019.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228798262|gb|EEM45261.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228804180|gb|EEM50794.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228810829|gb|EEM57175.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228817330|gb|EEM63416.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228823266|gb|EEM69100.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228829435|gb|EEM75063.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228835674|gb|EEM81038.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228841990|gb|EEM87096.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228848633|gb|EEM93479.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 200]
gi|228856052|gb|EEN00591.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
gi|296326620|gb|ADH09548.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis BMB171]
gi|300378778|gb|ADK07682.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
biovar anthracis str. CI]
gi|324329059|gb|ADY24319.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|326942942|gb|AEA18838.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar chinensis CT-43]
gi|358355684|dbj|BAL20856.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NC7401]
gi|358356253|dbj|BAL21424.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
NC7401]
gi|363617191|gb|EHL68590.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus sp.
7_6_55CFAA_CT2]
gi|364514838|gb|AEW58237.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F837/76]
gi|401076768|gb|EJP85119.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD022]
gi|401079111|gb|EJP87414.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
IS075]
gi|401081980|gb|EJP90251.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
IS075]
gi|401092725|gb|EJQ00850.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
AND1407]
gi|401108128|gb|EJQ16060.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3O-2]
gi|401109421|gb|EJQ17345.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-2]
gi|401113015|gb|EJQ20887.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4O-1]
gi|401116160|gb|EJQ24002.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4X12-1]
gi|401181200|gb|EJQ88353.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
ISP3191]
gi|401192773|gb|EJQ99783.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A1]
gi|401198721|gb|EJR05636.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A12]
gi|401199716|gb|EJR06613.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A12]
gi|401203128|gb|EJR09969.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-D12]
gi|401209361|gb|EJR16120.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD014]
gi|401215208|gb|EJR21926.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-D12]
gi|401225356|gb|EJR31905.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD045]
gi|401236392|gb|EJR42852.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD102]
gi|401238523|gb|EJR44964.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD102]
gi|401263108|gb|EJR69241.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD154]
gi|401271370|gb|EJR77387.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD166]
gi|401280314|gb|EJR86235.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD169]
gi|401281910|gb|EJR87815.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD156]
gi|401288311|gb|EJR94064.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD200]
gi|401632053|gb|EJS49843.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1X1-2]
gi|401791908|gb|AFQ17947.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis HD-771]
gi|401876825|gb|AFQ28992.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis HD-789]
gi|402445783|gb|EJV77651.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HD73]
gi|402454204|gb|EJV85997.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB1-1]
gi|409176690|gb|AFV20995.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus
thuringiensis Bt407]
gi|449025958|gb|AGE81121.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. HD73]
gi|452107033|gb|AGG03973.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 193
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ +D EK I++YINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQ 124
>gi|167628597|ref|YP_001679096.1| ATP-dependent Clp protease proteolytic subunit [Heliobacterium
modesticaldum Ice1]
gi|167591337|gb|ABZ83085.1| ATP-dependent clp protease proteolytic subunit [Heliobacterium
modesticaldum Ice1]
Length = 199
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIILGSAIDDNVANLIIAQLLFLEAEDPDKDIHLYINSPG--------GA 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAIYD M ++ + T+CVG A A LL AGAKG R A P++ IMI Q
Sbjct: 72 ITSGFAIYDTMQLIRCDVSTICVGMAASMGAFLLAAGAKGKRYASPNAEIMIHQ 125
>gi|197123826|ref|YP_002135777.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Anaeromyxobacter sp. K]
gi|226706439|sp|B4UAX9.1|CLPP_ANASK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|196173675|gb|ACG74648.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. K]
Length = 203
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V +I+A+ L+L+ ED +K I LYINS G G
Sbjct: 21 DIYSRLLKDRIIFLGTPVDDDVANVIIAQLLFLESEDPDKDINLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVKP + T+C+G A A LL GA G R A+P++ IMI Q
Sbjct: 73 VTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARIMIHQ 126
>gi|146310565|ref|YP_001175639.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter sp.
638]
gi|145317441|gb|ABP59588.1| ATP-dependent Clp protease proteolytic subunit ClpP [Enterobacter
sp. 638]
Length = 207
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 121 AKGKRFCLPNSRVMIHQ 137
>gi|163942836|ref|YP_001647720.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
weihenstephanensis KBAB4]
gi|228993855|ref|ZP_04153759.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
pseudomycoides DSM 12442]
gi|228999881|ref|ZP_04159453.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock3-17]
gi|229007435|ref|ZP_04165032.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock1-4]
gi|229062796|ref|ZP_04200101.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH603]
gi|229135952|ref|ZP_04264713.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST196]
gi|229169852|ref|ZP_04297548.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH621]
gi|423388590|ref|ZP_17365816.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1X1-3]
gi|423400026|ref|ZP_17377199.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-2]
gi|423416963|ref|ZP_17394052.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-1]
gi|423451604|ref|ZP_17428457.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5X1-1]
gi|423462074|ref|ZP_17438870.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5X2-1]
gi|423479281|ref|ZP_17455996.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6X1-1]
gi|423484826|ref|ZP_17461515.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6X1-2]
gi|423513410|ref|ZP_17489940.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA2-1]
gi|423519803|ref|ZP_17496284.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA2-4]
gi|423595672|ref|ZP_17571702.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD048]
gi|423670666|ref|ZP_17645695.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM034]
gi|423673107|ref|ZP_17648046.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM062]
gi|163865033|gb|ABY46092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
weihenstephanensis KBAB4]
gi|228613566|gb|EEK70695.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH621]
gi|228647494|gb|EEL03568.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST196]
gi|228716556|gb|EEL68259.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH603]
gi|228753823|gb|EEM03264.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock1-4]
gi|228759823|gb|EEM08797.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock3-17]
gi|228765911|gb|EEM14561.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
pseudomycoides DSM 12442]
gi|401108381|gb|EJQ16312.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-1]
gi|401133929|gb|EJQ41552.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5X2-1]
gi|401136677|gb|EJQ44263.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6X1-2]
gi|401145312|gb|EJQ52838.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5X1-1]
gi|401157944|gb|EJQ65340.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA2-4]
gi|401221566|gb|EJR28180.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD048]
gi|401294953|gb|EJS00578.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM034]
gi|401311207|gb|EJS16515.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM062]
gi|401642665|gb|EJS60371.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1X1-3]
gi|401656653|gb|EJS74168.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-2]
gi|402425585|gb|EJV57731.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6X1-1]
gi|402445654|gb|EJV77523.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA2-1]
Length = 193
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ +D EK I++YINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQ 124
>gi|404330109|ref|ZP_10970557.1| ATP-dependent Clp protease proteolytic subunit [Sporolactobacillus
vineae DSM 21990 = SL153]
Length = 194
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V ++A+ L+L ED EK I LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANAVVAQLLFLAAEDSEKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A + LL AG KG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTMQYIKPKVSTICIGMAASMGSFLLMAGEKGKRYALPNSEIMIHQ 124
>gi|421492899|ref|ZP_15940258.1| hypothetical protein MU9_1428 [Morganella morganii subsp. morganii
KT]
gi|400193004|gb|EJO26141.1| hypothetical protein MU9_1428 [Morganella morganii subsp. morganii
KT]
Length = 262
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 93/175 (53%), Gaps = 18/175 (10%)
Query: 41 SPFANGSVSSDFSGLRLRPDCLNPD---SFCKSK----PRSPVITMVIPFTSGTAWEQPP 93
S +++ +SS +G+R P N + S+ ++ P ++ MVI TS +
Sbjct: 30 SAWSSHRISSKITGIRQAPIKFNQEMDMSYHDNQDTFAPNMALVPMVIEQTSRG---ERS 86
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLG 153
D+ S L K+RI++L + LI+A+ L+L+ E+ EK I LYINS G G
Sbjct: 87 YDIYSRLLKDRIIFLTGQVEDHMANLIVAQLLFLEAENPEKDISLYINSPG--------G 138
Query: 154 YETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T +IYD M ++KP + T+CVG A + LL AGA G R LP+S +MI Q
Sbjct: 139 VITAGMSIYDTMQFIKPQVSTICVGQACSMGSFLLAAGAPGKRYCLPNSRVMIHQ 193
>gi|225573066|ref|ZP_03781821.1| hypothetical protein RUMHYD_01257 [Blautia hydrogenotrophica DSM
10507]
gi|225039572|gb|EEG49818.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Blautia
hydrogenotrophica DSM 10507]
Length = 193
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG L++A+ L+L+ ED K I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVTASLVVAQLLFLESEDAGKDIQLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+K + T+C+G A A LL GAKG R ALP+STIMI Q
Sbjct: 71 VTAGMAIYDTMQYIKCDVSTICLGLAASMGAFLLAGGAKGKRIALPNSTIMIHQ 124
>gi|423138926|ref|ZP_17126564.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. houtenae str. ATCC BAA-1581]
gi|160865722|gb|ABX22345.1| hypothetical protein SARI_02486 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
gi|379051480|gb|EHY69371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. houtenae str. ATCC BAA-1581]
Length = 243
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 44 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 97
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 98 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 149
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 150 AFLLTAGAKGKRFCLPNSRVMIHQ 173
>gi|354722308|ref|ZP_09036523.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter mori
LMG 25706]
Length = 207
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQ 137
>gi|419389854|ref|ZP_13930693.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15A]
gi|419395026|ref|ZP_13935811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15B]
gi|419400377|ref|ZP_13941111.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15C]
gi|419405549|ref|ZP_13946253.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15D]
gi|419411043|ref|ZP_13951716.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15E]
gi|378244656|gb|EHY04598.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15A]
gi|378251878|gb|EHY11774.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15B]
gi|378252208|gb|EHY12102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15C]
gi|378257938|gb|EHY17774.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15D]
gi|378261234|gb|EHY21029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15E]
Length = 207
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFS---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQ 137
>gi|228915390|ref|ZP_04078983.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228844333|gb|EEM89391.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 198
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 24 DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +G KG R ALP+S IMI Q
Sbjct: 76 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGTKGKRFALPNSEIMIHQ 129
>gi|453062000|gb|EMF02995.1| ATP-dependent Clp protease proteolytic subunit [Serratia marcescens
VGH107]
Length = 193
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T+ + D+ S L ++RIV+L V E++ A+ L+L+ E+ EKPI+
Sbjct: 2 MLVPMVVEQTSRGERSFDIYSRLLRDRIVFLNGEVNDDVAEMLCAQLLFLEAENPEKPIH 61
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y++ P+ TLC+G A + LL AG G+R
Sbjct: 62 LYINSPG--------GVITSGLAIYDTMQYIRAPVHTLCMGTARSMGSFLLMAGESGHRM 113
Query: 198 ALPSSTIMIKQ 208
ALP++++ + Q
Sbjct: 114 ALPNASLHVHQ 124
>gi|403414739|emb|CCM01439.1| predicted protein [Fibroporia radiculosa]
Length = 257
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + R++ L + + L +A+ L+L+ E+ KPI+LYINS G G
Sbjct: 69 DIFSRLLRERVIMLYGPIRDTDSALTVAQLLFLEAEETSKPIHLYINSPG--------GS 120
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YV PI T CVG A +LLL AG KG R ALP STIMI Q
Sbjct: 121 VTAGLAIYDTMQYVSSPIHTYCVGQACSMGSLLLAAGEKGKRHALPHSTIMIHQ 174
>gi|91083021|ref|XP_974664.1| PREDICTED: similar to ClpP caseinolytic peptidase, ATP-dependent,
proteolytic subunit homolog (E. coli) [Tribolium
castaneum]
gi|270007650|gb|EFA04098.1| hypothetical protein TcasGA2_TC014333 [Tribolium castaneum]
Length = 258
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI+ L + +I+A+ L+LQ E KPI++YINS G G
Sbjct: 54 DIYSRLLRERIICLMGPITDYTSSVIIAQLLFLQAESASKPIHMYINSPG--------GV 105
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T IYD M Y+ PP+ T CVG A A+L+L AGAKG R +LP+S IMI Q
Sbjct: 106 ITSGLGIYDTMQYILPPVATWCVGQACSMASLILAAGAKGMRHSLPNSRIMIHQ 159
>gi|194015348|ref|ZP_03053964.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
pumilus ATCC 7061]
gi|194012752|gb|EDW22318.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
pumilus ATCC 7061]
Length = 198
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ ED EK I +YINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQ 124
>gi|116622996|ref|YP_825152.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Solibacter usitatus Ellin6076]
gi|116226158|gb|ABJ84867.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Solibacter usitatus Ellin6076]
Length = 206
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 68/121 (56%), Gaps = 8/121 (6%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K I++LG V LI+A+ L+L+ ED EK I +Y+NS G G
Sbjct: 22 DIYSRLLKENIIFLGTPIDDQVANLIIAQLLFLEAEDPEKDISIYVNSPG--------GS 73
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQAGDTGI 214
T AI D M +++P I T+CVG A AA+LL G KG R +LP+S IMI Q G+
Sbjct: 74 ITAGLAILDTMAFIRPDIVTICVGQAASMAAVLLAKGTKGKRFSLPNSRIMIHQPSMQGL 133
Query: 215 C 215
Sbjct: 134 A 134
>gi|27904898|ref|NP_778024.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. Bp (Baizongia pistaciae)]
gi|31076632|sp|Q89AA1.1|CLPP_BUCBP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|27904296|gb|AAO27129.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. Bp (Baizongia pistaciae)]
Length = 205
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 79/135 (58%), Gaps = 11/135 (8%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
S +I MVI TS + + D+ S L K RI++L + + LI+A+ L+L+ E+ +
Sbjct: 12 SLLIPMVIEKTS---YGERSYDIYSRLLKERIIFLTGTIDDNTANLIVAQMLFLEAENAK 68
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
+ IY+YINS G G T +IYD M ++KP + T+C+G A AAL+L AG K
Sbjct: 69 QDIYIYINSPG--------GVITAGMSIYDTMKFIKPNVNTICIGQACSMAALILTAGKK 120
Query: 194 GNRAALPSSTIMIKQ 208
G R LP+S IMI Q
Sbjct: 121 GYRYCLPNSRIMIHQ 135
>gi|312898487|ref|ZP_07757877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
micronuciformis F0359]
gi|310620406|gb|EFQ03976.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
micronuciformis F0359]
Length = 202
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++L + +V ++A+ L+L+ ++ +K I+LYINS G G
Sbjct: 21 DIYSRLLKDRIIFLTGAIDDTVANSVIAQLLFLEADNPDKDIHLYINSPG--------GV 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG+A A++LL AG KG R ALP S +MI Q
Sbjct: 73 VTAGMAIYDTMRYIKPDVSTICVGSAASMASVLLTAGTKGKRFALPHSQVMIHQ 126
>gi|303250639|ref|ZP_07336836.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|302650627|gb|EFL80786.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 196
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIY M ++KP + TLC G A A LL GAKG R ALP++ +MI Q
Sbjct: 71 VTAGLAIYATMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQ 124
>gi|407981209|ref|ZP_11161953.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
HYC-10]
gi|407411926|gb|EKF33805.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
HYC-10]
Length = 198
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ ED EK I +YINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQ 124
>gi|228934064|ref|ZP_04096905.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228825578|gb|EEM71370.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 198
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 24 DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D M +KP + TLC+G A ALLL +G KG R ALP+S IMI Q
Sbjct: 76 TTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGTKGKRFALPNSEIMIHQ 129
>gi|126657142|ref|ZP_01728313.1| ATP-dependent protease; ClpP [Cyanothece sp. CCY0110]
gi|126621685|gb|EAZ92395.1| ATP-dependent protease; ClpP [Cyanothece sp. CCY0110]
Length = 147
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + LI+A+ L+L+ ED +K IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPDKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ I+D M ++P + T+C+G A A LL AGAKG R +LP+S IMI Q
Sbjct: 69 VSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQ 122
>gi|418511864|ref|ZP_13078112.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
gi|366084181|gb|EHN48092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
Length = 207
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 121 AKGKRFCLPNSRVMIHQ 137
>gi|16759428|ref|NP_455045.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|16763829|ref|NP_459444.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|29142800|ref|NP_806142.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|162139608|ref|YP_215477.2| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|168237562|ref|ZP_02662620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|168261116|ref|ZP_02683089.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|168465541|ref|ZP_02699423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|194443946|ref|YP_002039691.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194451357|ref|YP_002044483.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194734455|ref|YP_002113479.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|204930575|ref|ZP_03221505.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|207855928|ref|YP_002242579.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|213025962|ref|ZP_03340409.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
gi|213419494|ref|ZP_03352560.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213425858|ref|ZP_03358608.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213646005|ref|ZP_03376058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213853068|ref|ZP_03382600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|238911421|ref|ZP_04655258.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
gi|339998420|ref|YP_004729303.1| ATP-dependent clp protease proteolytic subunit [Salmonella bongori
NCTC 12419]
gi|378443952|ref|YP_005231584.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|378448785|ref|YP_005236144.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|378698411|ref|YP_005180368.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|378983053|ref|YP_005246208.1| ATP-dependent Clp protease proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|378987850|ref|YP_005251014.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|409248894|ref|YP_006884732.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|416424704|ref|ZP_11691885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|416432829|ref|ZP_11696434.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|416440099|ref|ZP_11700680.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|416444542|ref|ZP_11703775.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|416453748|ref|ZP_11709822.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|416458586|ref|ZP_11713105.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|416465622|ref|ZP_11716944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|416473280|ref|ZP_11719747.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|416484368|ref|ZP_11724164.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|416501557|ref|ZP_11732147.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|416510475|ref|ZP_11737073.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|416520600|ref|ZP_11740312.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|416526651|ref|ZP_11742556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|416536139|ref|ZP_11748206.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|416542339|ref|ZP_11751509.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|416552363|ref|ZP_11757079.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|416557282|ref|ZP_11759411.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|416573530|ref|ZP_11767876.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|416576687|ref|ZP_11769269.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|416583721|ref|ZP_11773477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|416595069|ref|ZP_11780883.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|416596606|ref|ZP_11781498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|416605755|ref|ZP_11787187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|416614720|ref|ZP_11792972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|416623397|ref|ZP_11797372.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|416634045|ref|ZP_11802326.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|416639007|ref|ZP_11804306.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|416648501|ref|ZP_11809146.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|416653401|ref|ZP_11811845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|416670923|ref|ZP_11820412.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|416673586|ref|ZP_11820909.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|416691334|ref|ZP_11826156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|416706818|ref|ZP_11832007.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|416713232|ref|ZP_11836874.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|416719437|ref|ZP_11841293.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|416723573|ref|ZP_11844239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|416734155|ref|ZP_11850810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|416740075|ref|ZP_11854163.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|416745272|ref|ZP_11857204.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|416757171|ref|ZP_11863001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|416764387|ref|ZP_11867991.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|416766796|ref|ZP_11869412.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|418485272|ref|ZP_13054256.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|418490798|ref|ZP_13057334.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|418493157|ref|ZP_13059625.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|418498099|ref|ZP_13064514.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|418504393|ref|ZP_13070751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|418507976|ref|ZP_13074284.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|418525614|ref|ZP_13091594.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|418763194|ref|ZP_13319318.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|418766728|ref|ZP_13322800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|418771899|ref|ZP_13327905.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|418774850|ref|ZP_13330811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|418781197|ref|ZP_13337082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|418784659|ref|ZP_13340496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|418791369|ref|ZP_13347132.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|418793869|ref|ZP_13349595.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|418804741|ref|ZP_13360345.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|418807601|ref|ZP_13363159.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|418812139|ref|ZP_13367663.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|418815498|ref|ZP_13370999.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|418821321|ref|ZP_13376746.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|418825219|ref|ZP_13380527.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22462]
gi|418831776|ref|ZP_13386726.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|418835778|ref|ZP_13390669.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|418838762|ref|ZP_13393604.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|418844394|ref|ZP_13399186.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|418848964|ref|ZP_13403699.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|418853324|ref|ZP_13408017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|418860806|ref|ZP_13415381.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|418864289|ref|ZP_13418824.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|418866312|ref|ZP_13420775.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|419727608|ref|ZP_14254576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|419733911|ref|ZP_14260806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|419738879|ref|ZP_14265635.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|419743018|ref|ZP_14269686.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|419749564|ref|ZP_14276043.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|419788921|ref|ZP_14314604.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|419793963|ref|ZP_14319579.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|421357762|ref|ZP_15808070.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|421365243|ref|ZP_15815465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|421368981|ref|ZP_15819165.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|421372429|ref|ZP_15822578.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|421376040|ref|ZP_15826149.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|421380610|ref|ZP_15830672.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|421383974|ref|ZP_15834003.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|421392475|ref|ZP_15842432.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|421396008|ref|ZP_15845940.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|421398667|ref|ZP_15848572.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|421405151|ref|ZP_15854986.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|421407751|ref|ZP_15857558.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|421412093|ref|ZP_15861856.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|421419440|ref|ZP_15869132.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|421423883|ref|ZP_15873534.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|421425637|ref|ZP_15875272.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|421429985|ref|ZP_15879579.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|421436812|ref|ZP_15886338.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|421439185|ref|ZP_15888676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|421445860|ref|ZP_15895281.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|421451188|ref|ZP_15900554.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|421572546|ref|ZP_16018192.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|421577455|ref|ZP_16023043.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|421582044|ref|ZP_16027585.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|421584557|ref|ZP_16030065.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|421884328|ref|ZP_16315543.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|422024583|ref|ZP_16371060.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|422029606|ref|ZP_16375862.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|427545785|ref|ZP_18926371.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|427562133|ref|ZP_18931136.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|427580636|ref|ZP_18935958.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|427602844|ref|ZP_18940734.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|427627512|ref|ZP_18945644.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|427650793|ref|ZP_18950400.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|427659813|ref|ZP_18955354.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|427664926|ref|ZP_18960100.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|427698521|ref|ZP_18965034.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
gi|436615597|ref|ZP_20514266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|436797184|ref|ZP_20523130.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS44]
gi|436810601|ref|ZP_20529639.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436813651|ref|ZP_20531839.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436831375|ref|ZP_20536043.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|436849785|ref|ZP_20540922.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|436856198|ref|ZP_20545303.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|436863183|ref|ZP_20549726.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|436871659|ref|ZP_20554833.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|436878810|ref|ZP_20559229.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436886925|ref|ZP_20563331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|436894408|ref|ZP_20567886.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|436904534|ref|ZP_20574551.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|436909989|ref|ZP_20576574.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436918242|ref|ZP_20581413.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|436925537|ref|ZP_20585969.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|436934282|ref|ZP_20590286.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|436941290|ref|ZP_20594850.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436949280|ref|ZP_20599294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|436959668|ref|ZP_20603865.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|436975115|ref|ZP_20611391.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|436987194|ref|ZP_20615838.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|436999731|ref|ZP_20620304.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|437010049|ref|ZP_20624029.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437018154|ref|ZP_20626646.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437035561|ref|ZP_20633487.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|437046589|ref|ZP_20638405.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|437049340|ref|ZP_20639960.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|437056846|ref|ZP_20644214.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437065298|ref|ZP_20648983.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437078922|ref|ZP_20656416.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437081946|ref|ZP_20658021.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437089970|ref|ZP_20662542.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|437117164|ref|ZP_20669784.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|437122541|ref|ZP_20672383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|437132642|ref|ZP_20678092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|437137749|ref|ZP_20680544.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|437149062|ref|ZP_20687935.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|437151979|ref|ZP_20689650.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|437160927|ref|ZP_20695000.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|437172784|ref|ZP_20701307.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|437176839|ref|ZP_20703643.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|437188248|ref|ZP_20710252.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|437259709|ref|ZP_20717229.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|437272720|ref|ZP_20724470.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|437274738|ref|ZP_20725430.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|437288358|ref|ZP_20730692.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|437307007|ref|ZP_20734649.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|437323566|ref|ZP_20739300.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|437338518|ref|ZP_20743723.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|437353359|ref|ZP_20747850.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|437456275|ref|ZP_20760394.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|437470002|ref|ZP_20765017.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|437485279|ref|ZP_20769391.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|437499044|ref|ZP_20773853.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|437513523|ref|ZP_20777501.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|437531377|ref|ZP_20780747.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|437554751|ref|ZP_20784523.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|437571697|ref|ZP_20788806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|437602362|ref|ZP_20798369.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|437625360|ref|ZP_20805445.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|437632904|ref|ZP_20806597.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|437658474|ref|ZP_20811681.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|437672066|ref|ZP_20816065.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|437694788|ref|ZP_20821863.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|437710351|ref|ZP_20826456.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|437726124|ref|ZP_20829929.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|437763921|ref|ZP_20834985.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 76-2651]
gi|437811612|ref|ZP_20841204.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|437833273|ref|ZP_20844621.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|438047872|ref|ZP_20856088.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|438091449|ref|ZP_20860960.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|438105780|ref|ZP_20866398.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|438114455|ref|ZP_20870071.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|438147683|ref|ZP_20876176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Pullorum str. ATCC
9120]
gi|440761974|ref|ZP_20941040.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|440768721|ref|ZP_20947686.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|440772487|ref|ZP_20951391.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|445144197|ref|ZP_21386946.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|445150702|ref|ZP_21389848.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
gi|445172332|ref|ZP_21396423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|445214950|ref|ZP_21401734.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|445232595|ref|ZP_21406108.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|445246809|ref|ZP_21408349.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
gi|445337409|ref|ZP_21415966.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
gi|445343522|ref|ZP_21416991.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|445354600|ref|ZP_21421499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
gi|449785023|ref|YP_002145429.2| ATP-dependent Clp protease proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|452121291|ref|YP_007471539.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
gi|60391923|sp|P0A1D7.1|CLPP_SALTY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|60391924|sp|P0A1D8.1|CLPP_SALTI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|67460140|sp|Q57SB5.2|CLPP_SALCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|226706468|sp|B5QTJ6.1|CLPP_SALEP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706469|sp|B4T9E3.1|CLPP_SALHS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706470|sp|B4SWU1.1|CLPP_SALNS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706472|sp|B4TMC6.1|CLPP_SALSV RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|25289858|pir||AC0558 ATP-dependent clp protease proteolytic chain [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|7594816|dbj|BAA94668.1| serine protease subunit [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|16418955|gb|AAL19403.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|16501719|emb|CAD08907.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi]
gi|29138432|gb|AAO70002.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|194402609|gb|ACF62831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194409661|gb|ACF69880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194709957|gb|ACF89178.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|195631923|gb|EDX50443.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|197289522|gb|EDY28885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|204320509|gb|EDZ05712.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|205350070|gb|EDZ36701.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|206707731|emb|CAR32016.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|261245731|emb|CBG23528.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|267992163|gb|ACY87048.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|301157059|emb|CBW16543.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312911481|dbj|BAJ35455.1| ATP-dependent Clp protease proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|320084722|emb|CBY94513.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|322614726|gb|EFY11655.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322618832|gb|EFY15720.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322623539|gb|EFY20378.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322629162|gb|EFY25941.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322631883|gb|EFY28637.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322637380|gb|EFY34082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322642065|gb|EFY38675.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322647884|gb|EFY44359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322652562|gb|EFY48916.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322653276|gb|EFY49609.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322660575|gb|EFY56811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322664727|gb|EFY60920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669220|gb|EFY65370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322670765|gb|EFY66898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322678996|gb|EFY75051.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322682025|gb|EFY78050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322685146|gb|EFY81143.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323192960|gb|EFZ78183.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323196958|gb|EFZ82100.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203943|gb|EFZ88960.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323214175|gb|EFZ98933.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323214501|gb|EFZ99252.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323223058|gb|EGA07401.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323227007|gb|EGA11188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323230175|gb|EGA14295.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323233913|gb|EGA18002.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323238393|gb|EGA22451.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323244080|gb|EGA28089.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323246241|gb|EGA30224.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323251867|gb|EGA35730.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323257864|gb|EGA41543.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323261123|gb|EGA44715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323264947|gb|EGA48446.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323272510|gb|EGA55917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|332987397|gb|AEF06380.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|339511781|emb|CCC29490.1| ATP-dependent clp protease proteolytic subunit [Salmonella bongori
NCTC 12419]
gi|363549144|gb|EHL33501.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|363554589|gb|EHL38824.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|363557703|gb|EHL41908.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|363564589|gb|EHL48636.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|363565245|gb|EHL49281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|363571797|gb|EHL55701.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|363578796|gb|EHL62598.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|366056250|gb|EHN20576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|366065085|gb|EHN29280.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|366065332|gb|EHN29522.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|366071235|gb|EHN35335.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|366073876|gb|EHN37940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|366080282|gb|EHN44254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|366829495|gb|EHN56371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|372206383|gb|EHP19887.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|379986042|emb|CCF87816.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|381299098|gb|EIC40172.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|381300719|gb|EIC41777.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|381301190|gb|EIC42246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|381310720|gb|EIC51546.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|381312570|gb|EIC53367.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|392616053|gb|EIW98488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|392616387|gb|EIW98820.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|392733474|gb|EIZ90676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|392734438|gb|EIZ91620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|392736739|gb|EIZ93901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|392747924|gb|EJA04915.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|392750050|gb|EJA07026.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|392754190|gb|EJA11109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|392755458|gb|EJA12368.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|392763549|gb|EJA20356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|392769770|gb|EJA26499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|392776879|gb|EJA33565.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|392778864|gb|EJA35535.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|392790916|gb|EJA47409.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|392791950|gb|EJA48418.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|392798673|gb|EJA54944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|392803053|gb|EJA59254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|392814588|gb|EJA70539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|392815214|gb|EJA71158.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|392816913|gb|EJA72832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22462]
gi|392822311|gb|EJA78123.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|392826190|gb|EJA81923.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|392827372|gb|EJA83081.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|392831550|gb|EJA87183.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|392840222|gb|EJA95758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|395980754|gb|EJH89977.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|395983276|gb|EJH92469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|395989999|gb|EJH99131.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|396000079|gb|EJI09094.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|396003267|gb|EJI12255.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|396003659|gb|EJI12646.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|396008036|gb|EJI16971.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|396011052|gb|EJI19963.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|396020536|gb|EJI29377.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|396024462|gb|EJI33248.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|396029683|gb|EJI38419.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|396030457|gb|EJI39191.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|396035580|gb|EJI44252.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|396035931|gb|EJI44602.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|396044341|gb|EJI52938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|396052132|gb|EJI60640.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|396056908|gb|EJI65381.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|396057302|gb|EJI65774.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|396063943|gb|EJI72331.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|396064295|gb|EJI72682.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|396071391|gb|EJI79716.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|402515481|gb|EJW22895.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|402516043|gb|EJW23456.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|402516372|gb|EJW23783.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|402531075|gb|EJW38288.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|414023307|gb|EKT06741.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|414023848|gb|EKT07262.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|414025324|gb|EKT08654.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|414037188|gb|EKT19972.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|414038658|gb|EKT21365.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|414042387|gb|EKT24925.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|414051734|gb|EKT33818.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|414053183|gb|EKT35195.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|414057649|gb|EKT39402.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|414061847|gb|EKT43224.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|414067321|gb|EKT47699.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
gi|434938414|gb|ELL45392.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Pullorum str. ATCC
9120]
gi|434961256|gb|ELL54574.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS44]
gi|434965093|gb|ELL58056.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434967686|gb|ELL60487.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|434975159|gb|ELL67469.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434982332|gb|ELL74155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|434988362|gb|ELL79961.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|434991631|gb|ELL83119.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|434997710|gb|ELL88949.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|435000874|gb|ELL91996.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|435007486|gb|ELL98339.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435011457|gb|ELM02177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|435017056|gb|ELM07564.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|435018222|gb|ELM08697.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|435028362|gb|ELM18441.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435030974|gb|ELM20963.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|435039930|gb|ELM29699.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|435041422|gb|ELM31164.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|435045121|gb|ELM34766.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435050066|gb|ELM39571.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|435053978|gb|ELM43414.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|435054333|gb|ELM43768.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|435059775|gb|ELM49050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|435060272|gb|ELM49542.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|435066949|gb|ELM56020.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435074928|gb|ELM63751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|435078059|gb|ELM66803.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|435081746|gb|ELM70387.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435096364|gb|ELM84636.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435096878|gb|ELM85140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|435099946|gb|ELM88137.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435101278|gb|ELM89432.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435111114|gb|ELM99019.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435113536|gb|ELN01382.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|435114988|gb|ELN02778.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|435122189|gb|ELN09711.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|435123367|gb|ELN10860.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|435130871|gb|ELN18099.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|435134383|gb|ELN21511.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|435143452|gb|ELN30318.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|435143861|gb|ELN30715.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|435146440|gb|ELN33233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|435155564|gb|ELN42108.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|435156168|gb|ELN42670.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|435165097|gb|ELN51157.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|435168052|gb|ELN53905.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|435175816|gb|ELN61219.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|435183758|gb|ELN68719.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|435186995|gb|ELN71808.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|435194617|gb|ELN79045.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|435195909|gb|ELN80265.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|435206982|gb|ELN90474.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|435212164|gb|ELN95189.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|435214887|gb|ELN97635.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|435216454|gb|ELN98929.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|435223967|gb|ELO05951.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|435230160|gb|ELO11494.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|435243443|gb|ELO23701.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|435243627|gb|ELO23884.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|435248150|gb|ELO28071.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|435253179|gb|ELO32667.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|435260050|gb|ELO39263.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|435270473|gb|ELO48969.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|435278368|gb|ELO56239.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|435279708|gb|ELO57452.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|435282538|gb|ELO60153.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|435289124|gb|ELO66114.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|435292074|gb|ELO68863.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|435297966|gb|ELO74223.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|435302259|gb|ELO78234.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|435308367|gb|ELO83330.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 76-2651]
gi|435315858|gb|ELO89078.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|435319476|gb|ELO92303.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|435321469|gb|ELO93884.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|435328854|gb|ELP00312.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|436416440|gb|ELP14346.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|436418436|gb|ELP16320.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|436424266|gb|ELP22049.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|444847337|gb|ELX72487.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|444856539|gb|ELX81566.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
gi|444859546|gb|ELX84490.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|444860439|gb|ELX85354.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|444862183|gb|ELX87043.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|444873409|gb|ELX97706.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
gi|444881326|gb|ELY05370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|444887690|gb|ELY11383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
gi|444890253|gb|ELY13606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
gi|451910295|gb|AGF82101.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
Length = 207
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 121 AKGKRFCLPNSRVMIHQ 137
>gi|157693854|ref|YP_001488316.1| ATP-dependent Clp protease proteolytic subunit [Bacillus pumilus
SAFR-032]
gi|389574748|ref|ZP_10164807.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. M 2-6]
gi|167008647|sp|A8FHN9.1|CLPP_BACP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157682612|gb|ABV63756.1| S14 family endopeptidase ClpP [Bacillus pumilus SAFR-032]
gi|388425674|gb|EIL83500.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. M 2-6]
Length = 198
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ ED EK I +YINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQ 124
>gi|392548930|ref|ZP_10296067.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
rubra ATCC 29570]
Length = 205
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 75/137 (54%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P + ++ MV+ TA + D+ S L K RI++L + LI+A+ L+L+ E
Sbjct: 8 PLNALVPMVV---EQTAKGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQLLFLESES 64
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+CVG A A LL G
Sbjct: 65 PEKDIYLYINSPG--------GSVTAGMSIYDTMNFIKPDVSTVCVGQAASMGAFLLSGG 116
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 117 AKGKRYCLPNSRVMIHQ 133
>gi|326519674|dbj|BAK00210.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 256
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 73/133 (54%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ MVI TS D+ S L K RIV + L++A+ L+L+ E+ KP
Sbjct: 31 LVPMVIEHTSRGERAY---DIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPAKP 87
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I+LYINS G G T AIYD M Y++ P+ TLC+G A +LLL AGA G
Sbjct: 88 IHLYINSPG--------GVVTAGLAIYDTMQYIRSPVTTLCIGQAASMGSLLLAAGAPGE 139
Query: 196 RAALPSSTIMIKQ 208
R ALP++ +MI Q
Sbjct: 140 RRALPNARVMIHQ 152
>gi|170767754|ref|ZP_02902207.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
albertii TW07627]
gi|170123242|gb|EDS92173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
albertii TW07627]
Length = 207
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 121 AKGKRFCLPNSRVMIHQ 137
>gi|154687585|ref|YP_001422746.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens FZB42]
gi|308175199|ref|YP_003921904.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens DSM 7]
gi|375363903|ref|YP_005131942.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|384161083|ref|YP_005543156.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens TA208]
gi|384165974|ref|YP_005547353.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens LL3]
gi|384170169|ref|YP_005551547.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens XH7]
gi|384266990|ref|YP_005422697.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|385266358|ref|ZP_10044445.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 5B6]
gi|387900080|ref|YP_006330376.1| ATP-dependent Clp protease, protease subunit [Bacillus
amyloliquefaciens Y2]
gi|394991001|ref|ZP_10383811.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 916]
gi|421730139|ref|ZP_16169268.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|429506759|ref|YP_007187943.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|451345383|ref|YP_007444014.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens IT-45]
gi|452857085|ref|YP_007498768.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|166201799|sp|A7Z939.1|CLPP_BACA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|154353436|gb|ABS75515.1| ClpP [Bacillus amyloliquefaciens FZB42]
gi|307608063|emb|CBI44434.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens DSM 7]
gi|328555171|gb|AEB25663.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens TA208]
gi|328913529|gb|AEB65125.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens LL3]
gi|341829448|gb|AEK90699.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens XH7]
gi|371569897|emb|CCF06747.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|380500343|emb|CCG51381.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|385150854|gb|EIF14791.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 5B6]
gi|387174190|gb|AFJ63651.1| ATP-dependent Clp protease, protease subunit [Bacillus
amyloliquefaciens Y2]
gi|393808148|gb|EJD69457.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 916]
gi|407076105|gb|EKE49089.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|429488349|gb|AFZ92273.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|449849141|gb|AGF26133.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens IT-45]
gi|452081345|emb|CCP23112.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 198
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ ED EK I +YINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQ 124
>gi|113952713|ref|YP_729943.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9311]
gi|113880064|gb|ABI45022.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. CC9311]
Length = 200
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ + L RI++LG V ++A+ LYL ED KPIYLYINS G G
Sbjct: 22 DIYTRLGVERILFLGQDVNDGVANSLVAQMLYLDSEDSSKPIYLYINSPG--------GS 73
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVK + T+CVG A A LL AG KG R ALP S IMI Q
Sbjct: 74 VTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPHSRIMIHQ 127
>gi|443730787|gb|ELU16145.1| hypothetical protein CAPTEDRAFT_163852 [Capitella teleta]
Length = 233
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L V+ L++A+ L+LQ E +KPI++YINS G G
Sbjct: 51 DIYSRLLKERIICLMGPINDHVSSLVVAQLLFLQSESSKKPIHMYINSPG--------GV 102
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T IYD M YV PPI T CVG A A+LLL AGA G R +LP+S IMI Q
Sbjct: 103 VTAGLGIYDTMQYVLPPIATWCVGQASSMASLLLCAGAPGMRHSLPNSRIMIHQ 156
>gi|417324522|ref|ZP_12110764.1| ATP-dependent Clp protease proteolytic subunit, partial [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
gi|353578760|gb|EHC40499.1| ATP-dependent Clp protease proteolytic subunit, partial [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
Length = 216
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 21 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 77
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 78 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 129
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 130 AKGKRFCLPNSRVMIHQ 146
>gi|205351759|ref|YP_002225560.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|445132409|ref|ZP_21382196.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
gi|205271540|emb|CAR36358.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|444849097|gb|ELX74214.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
Length = 207
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 121 AKGKRFCLPNSRVMIHQ 137
>gi|62126693|gb|AAX64396.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease,
heat shock protein F215 [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
Length = 246
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 51 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 107
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 108 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 159
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 160 AKGKRFCLPNSRVMIHQ 176
>gi|56414396|ref|YP_151471.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197363316|ref|YP_002142953.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|67460194|sp|Q5PFN4.1|CLPP_SALPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|226706471|sp|B5BD83.1|CLPP_SALPK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56128653|gb|AAV78159.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197094793|emb|CAR60326.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
Length = 207
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGISIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 121 AKGKRFCLPNSRVMIHQ 137
>gi|406882489|gb|EKD30274.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium (gcode 4)]
Length = 207
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 81/140 (57%), Gaps = 11/140 (7%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
K++ ++ +I VI G ++ D+ S L ++R+V+LG + SV ++A+ LYL+
Sbjct: 10 KTQIQATLIPTVIDKIGG---QERAYDIYSRLLEDRVVFLGDAIDASVANTVIAQLLYLE 66
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
+D + PI +Y+NS G G+ T AIYDVM YV+ I T+CVG A +++L
Sbjct: 67 KQDPKAPITIYVNSPG--------GHVTAGLAIYDVMQYVQCDIITVCVGLAASMGSIIL 118
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
G KG R +LP S IMI Q
Sbjct: 119 AGGTKGKRYSLPHSEIMIHQ 138
>gi|418296393|ref|ZP_12908237.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens CCNWGS0286]
gi|355539825|gb|EHH09063.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens CCNWGS0286]
Length = 202
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L +V+ L+ A+ L+L+ E+ +KPI+LYINS G G
Sbjct: 23 DIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPKKPIHLYINSPG--------GM 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FA+YD M Y++ P+ TLC+G A + LL AG G RAALP+++I+I Q
Sbjct: 75 VTSGFAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGMRAALPNASILIHQ 128
>gi|387824404|ref|YP_005823875.1| ATP-dependent Clp protease proteolytic subunit [Francisella cf.
novicida 3523]
gi|328676003|gb|AEB28678.1| ATP-dependent Clp protease proteolytic subunit [Francisella cf.
novicida 3523]
Length = 201
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 68/122 (55%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K RIV+L L++A+ L+L+ ED +K IY YINS G
Sbjct: 14 TAGGERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPG-- 71
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T +YD M ++KP + T+C+G A +LLL GAKG R +LPSS IMI
Sbjct: 72 ------GMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMI 125
Query: 207 KQ 208
Q
Sbjct: 126 HQ 127
>gi|229091793|ref|ZP_04222992.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-42]
gi|228691575|gb|EEL45329.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-42]
Length = 193
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV +G V ++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T FAI D + +KP + TLC+G A ALLL +GAKG R ALP+S IMI Q
Sbjct: 71 TTAGFAILDTINLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQ 124
>gi|375122544|ref|ZP_09767708.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
gi|326626794|gb|EGE33137.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
Length = 246
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 51 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 107
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 108 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 159
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 160 AKGKRFCLPNSRVMIHQ 176
>gi|334123167|ref|ZP_08497196.1| ATP-dependent Clp protease, protease subunit [Enterobacter
hormaechei ATCC 49162]
gi|449472613|ref|XP_004153647.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-like
[Cucumis sativus]
gi|333391041|gb|EGK62164.1| ATP-dependent Clp protease, protease subunit [Enterobacter
hormaechei ATCC 49162]
Length = 207
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQ 137
>gi|172058408|ref|YP_001814868.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Exiguobacterium sibiricum 255-15]
gi|171990929|gb|ACB61851.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Exiguobacterium sibiricum 255-15]
Length = 192
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V ++A+ L+L ED +K I LYINS G G
Sbjct: 18 DIYSRLLKDRIILLGSAIDDNVANSVVAQLLFLAAEDPDKEISLYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AGAKG R ALP++ IMI Q
Sbjct: 70 ITAGMAIYDTMNFIKPQVSTICIGMAASMGAFLLQAGAKGKRFALPNAEIMIHQ 123
>gi|56707749|ref|YP_169645.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis SCHU S4]
gi|89256249|ref|YP_513611.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica LVS]
gi|110670220|ref|YP_666777.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis FSC198]
gi|115314706|ref|YP_763429.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica OSU18]
gi|118497648|ref|YP_898698.1| ATP-dependent Clp protease proteolytic subunit [Francisella
novicida U112]
gi|134302069|ref|YP_001122038.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis WY96-3418]
gi|156502310|ref|YP_001428375.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|187931471|ref|YP_001891455.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. mediasiatica FSC147]
gi|194323619|ref|ZP_03057395.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
novicida FTE]
gi|254367562|ref|ZP_04983588.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
holarctica 257]
gi|254369239|ref|ZP_04985251.1| hypothetical protein FTAG_00191 [Francisella tularensis subsp.
holarctica FSC022]
gi|254370252|ref|ZP_04986258.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis FSC033]
gi|254373013|ref|ZP_04988502.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
novicida GA99-3549]
gi|254374463|ref|ZP_04989944.1| hypothetical protein FTDG_00632 [Francisella novicida GA99-3548]
gi|254874562|ref|ZP_05247272.1| ATP-dependent clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis MA00-2987]
gi|290953590|ref|ZP_06558211.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica URFT1]
gi|379716999|ref|YP_005305335.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis TIGB03]
gi|379725603|ref|YP_005317789.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis TI0902]
gi|385793031|ref|YP_005826007.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|385794385|ref|YP_005830791.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. tularensis NE061598]
gi|421751883|ref|ZP_16188920.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis AS_713]
gi|421753738|ref|ZP_16190727.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 831]
gi|421755254|ref|ZP_16192204.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 80700075]
gi|421757464|ref|ZP_16194344.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 80700103]
gi|421759321|ref|ZP_16196154.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 70102010]
gi|422938668|ref|YP_007011815.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica FSC200]
gi|423050597|ref|YP_007009031.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica F92]
gi|424674639|ref|ZP_18111555.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 70001275]
gi|67460184|sp|Q5NH47.1|CLPP_FRATT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243138|sp|Q2A3U1.1|CLPP_FRATH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122325271|sp|Q0BM92.1|CLPP_FRATO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122971012|sp|Q14IJ9.1|CLPP_FRAT1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201822|sp|A7NBR6.1|CLPP_FRATF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201823|sp|A0Q6S9.1|CLPP_FRATN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201824|sp|A4IYB6.1|CLPP_FRATW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706451|sp|B2SG18.1|CLPP_FRATM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56604241|emb|CAG45257.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis SCHU S4]
gi|89144080|emb|CAJ79331.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
holarctica LVS]
gi|110320553|emb|CAL08640.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis FSC198]
gi|115129605|gb|ABI82792.1| endopeptidase Clp [Francisella tularensis subsp. holarctica OSU18]
gi|118423554|gb|ABK89944.1| ATP-dependent Clp protease subunit P [Francisella novicida U112]
gi|134049846|gb|ABO46917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. tularensis WY96-3418]
gi|134253378|gb|EBA52472.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
holarctica 257]
gi|151568496|gb|EDN34150.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis FSC033]
gi|151570740|gb|EDN36394.1| ATP-dependent Clp protease subunit P [Francisella novicida
GA99-3549]
gi|151572182|gb|EDN37836.1| hypothetical protein FTDG_00632 [Francisella novicida GA99-3548]
gi|156252913|gb|ABU61419.1| ATP-dependent Clp protease, proteolytic subunit [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|157122189|gb|EDO66329.1| hypothetical protein FTAG_00191 [Francisella tularensis subsp.
holarctica FSC022]
gi|187712380|gb|ACD30677.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. mediasiatica FSC147]
gi|194321983|gb|EDX19465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. novicida FTE]
gi|254840561|gb|EET18997.1| ATP-dependent clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis MA00-2987]
gi|282158920|gb|ADA78311.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. tularensis NE061598]
gi|332678356|gb|AEE87485.1| ATP-dependent Clp protease proteolytic subunit [Francisella cf.
novicida Fx1]
gi|377827052|gb|AFB80300.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis TI0902]
gi|377828676|gb|AFB78755.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis TIGB03]
gi|407293819|gb|AFT92725.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica FSC200]
gi|409086420|gb|EKM86539.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 831]
gi|409086610|gb|EKM86726.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis AS_713]
gi|409088589|gb|EKM88653.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 80700075]
gi|409091047|gb|EKM91052.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 70102010]
gi|409092552|gb|EKM92523.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 80700103]
gi|417434683|gb|EKT89625.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 70001275]
gi|421951319|gb|AFX70568.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica F92]
Length = 201
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 68/122 (55%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K RIV+L L++A+ L+L+ ED +K IY YINS G
Sbjct: 14 TAGGERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPG-- 71
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T +YD M ++KP + T+C+G A +LLL GAKG R +LPSS IMI
Sbjct: 72 ------GMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMI 125
Query: 207 KQ 208
Q
Sbjct: 126 HQ 127
>gi|300715591|ref|YP_003740394.1| ATP-dependent Clp protease proteolytic subunit [Erwinia billingiae
Eb661]
gi|299061427|emb|CAX58539.1| ATP-dependent Clp protease proteolytic subunit [Erwinia billingiae
Eb661]
Length = 215
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 78/140 (55%), Gaps = 11/140 (7%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
++ P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 17 QTAPHMALVPMVVEQTS---RGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLE 73
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 74 AENPEKDIHLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLL 125
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
AG KG R ALP+S +MI Q
Sbjct: 126 TAGTKGKRYALPNSRVMIHQ 145
>gi|60389557|sp|Q6AK59.2|CLPP_DESPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 203
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 68/124 (54%), Gaps = 13/124 (10%)
Query: 90 EQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTG 144
EQ P D+ S L K RI++LG V +I+A+ L+L+ ED EK I YINS G
Sbjct: 9 EQTPRGERSYDIYSRLLKERIIFLGSGVNDDVANVIVAQLLFLEAEDPEKDITFYINSPG 68
Query: 145 TTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
G T AIYD M Y+K I TLC+G A A+LL AG G R ALP+S I
Sbjct: 69 --------GSVTAGMAIYDTMQYIKCDIATLCMGQAASMGAVLLAAGTAGKRYALPNSRI 120
Query: 205 MIKQ 208
MI Q
Sbjct: 121 MIHQ 124
>gi|304405398|ref|ZP_07387057.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
curdlanolyticus YK9]
gi|304345437|gb|EFM11272.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
curdlanolyticus YK9]
Length = 194
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + V +I A+ L+L ED +K I+ YINS G G
Sbjct: 20 DIYSRLLKDRIVFLGSAIDDQVANVITAQLLFLAAEDPDKDIHFYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ FAI D M Y+KP + T+C G A AA+LL +G KG R ALP+S +MI Q
Sbjct: 72 TSAGFAILDTMHYIKPDVQTICAGMAASFAAILLLSGTKGKRYALPNSEVMIHQ 125
>gi|194471774|ref|ZP_03077758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|205357584|ref|ZP_02571531.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205358475|ref|ZP_02656494.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205358901|ref|ZP_02665206.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|289827300|ref|ZP_06545983.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|374978474|ref|ZP_09719816.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|378960582|ref|YP_005218068.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. P-stx-12]
gi|383495256|ref|YP_005395945.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 798]
gi|386590381|ref|YP_006086781.1| ATP-dependent Clp protease proteolytic [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|417406175|ref|ZP_12157835.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|417472928|ref|ZP_12168488.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Rubislaw str. A4-653]
gi|417516426|ref|ZP_12179332.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|194458138|gb|EDX46977.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|197213461|gb|ACH50858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|205331008|gb|EDZ17772.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205334088|gb|EDZ20852.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205340153|gb|EDZ26917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|321226026|gb|EFX51077.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|353628150|gb|EHC76286.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|353652681|gb|EHC94446.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Rubislaw str. A4-653]
gi|353654323|gb|EHC95627.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|374354454|gb|AEZ46215.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. P-stx-12]
gi|380462077|gb|AFD57480.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 798]
gi|383797425|gb|AFH44507.1| ATP-dependent Clp protease proteolytic [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
Length = 243
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 48 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 104
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 105 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 156
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 157 AKGKRFCLPNSRVMIHQ 173
>gi|300721991|ref|YP_003711271.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Xenorhabdus nematophila ATCC 19061]
gi|297628488|emb|CBJ89055.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Xenorhabdus nematophila ATCC 19061]
Length = 207
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 78/140 (55%), Gaps = 8/140 (5%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
K +P +++V TA + D+ S L K+RI++L + LI+A+ L+L+
Sbjct: 6 KQDQYAPNMSLVPMVVEQTARGERAFDIYSRLLKDRIIFLTGQVEDHMANLIVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A + LL
Sbjct: 66 AENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
AGA+G R LP+S +MI Q
Sbjct: 118 AAGAEGKRFCLPNSRVMIHQ 137
>gi|436842089|ref|YP_007326467.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432170995|emb|CCO24366.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 202
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 73/135 (54%), Gaps = 11/135 (8%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
S I +VI T T + D+ S L K+RI+ L V +I A+ L+L+ ED E
Sbjct: 2 SGTIPIVIETTGRT---ERAYDIYSRLLKDRIILLSGEVNDHVASVICAQLLFLESEDPE 58
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
K IY+YINS G G T AIYD M Y+ P+ TLC+G A A LL AG K
Sbjct: 59 KEIYMYINSPG--------GVVTAGMAIYDTMQYISAPVSTLCMGQAASMGAFLLSAGEK 110
Query: 194 GNRAALPSSTIMIKQ 208
G+R +LP S I+I Q
Sbjct: 111 GHRYSLPHSRILIHQ 125
>gi|407917161|gb|EKG10482.1| Peptidase S14 ClpP [Macrophomina phaseolina MS6]
Length = 242
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 75/137 (54%), Gaps = 10/137 (7%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
PR T + T G W D+ S L K RIV L +V+ I+A+ L+L+ ++
Sbjct: 37 PRGWTPTPFVTETVGGGWH--TYDIFSRLLKERIVCLNGEVNETVSASIVAQLLFLEADN 94
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EKPI LYINS G G T AIYD M Y++ P+ T+CVG A +LLL G
Sbjct: 95 PEKPINLYINSPG--------GSVTAGLAIYDTMTYIRSPVTTICVGQAASMGSLLLCGG 146
Query: 192 AKGNRAALPSSTIMIKQ 208
A G+R+ LP S+IMI Q
Sbjct: 147 AAGHRSCLPHSSIMIHQ 163
>gi|374849800|dbj|BAL52805.1| ATP-dependent Clp protease, proteolytic subunit ClpP [uncultured
prokaryote]
Length = 201
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 75/136 (55%), Gaps = 11/136 (8%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
RS +I MV+ TA + D+ S L K+RI++LG V L++AE L+L+ ED
Sbjct: 6 RSQLIPMVV---EQTARGERAYDIYSRLLKDRIIFLGEPIDDQVANLVIAELLFLEKEDP 62
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
+K I +YIN+ G G + AIYD M +KP + T+CVG A A+LL G
Sbjct: 63 DKDIDMYINTPG--------GIVSAGLAIYDTMQAIKPDVATICVGQAASMGAVLLAGGT 114
Query: 193 KGNRAALPSSTIMIKQ 208
G R ALP + IMI Q
Sbjct: 115 PGKRYALPHARIMIHQ 130
>gi|417839806|ref|ZP_12485973.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M19107]
gi|341951681|gb|EGT78241.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M19107]
Length = 193
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 72/133 (54%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
VI MV+ TS + D+ S L K R+++L + LI+A+ L+L+ ED K
Sbjct: 3 VIPMVVEQTS---RGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDATKD 59
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I +YINS G G T AIYD M ++KP I TLC+G A A LL G G
Sbjct: 60 INIYINSPG--------GSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGK 111
Query: 196 RAALPSSTIMIKQ 208
RAALP++ +MI Q
Sbjct: 112 RAALPNARVMIHQ 124
>gi|407478072|ref|YP_006791949.1| ATP-dependent Clp protease proteolytic subunit [Exiguobacterium
antarcticum B7]
gi|407062151|gb|AFS71341.1| ATP-dependent Clp protease proteolytic subunit [Exiguobacterium
antarcticum B7]
Length = 192
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V ++A+ L+L ED +K I LYINS G G
Sbjct: 18 DIYSRLLKDRIILLGSAIDDNVANSVVAQLLFLAAEDPDKEISLYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AGAKG R ALP++ IMI Q
Sbjct: 70 ITAGMAIYDTMNFIKPQVSTICIGMAASMGAFLLQAGAKGKRFALPNAEIMIHQ 123
>gi|423082887|ref|ZP_17071470.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|423086337|ref|ZP_17074746.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|357547206|gb|EHJ29100.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|357547324|gb|EHJ29214.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
Length = 194
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T + D+ S L K+RI+++G ++ L++A+ L+L+ ED + I +YINS G
Sbjct: 11 TGQGERSYDIYSKLLKDRIIFIGEEINDAIASLVVAQLLFLESEDPDSDIIIYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T FAIYD M YV+ + T+C+G A +A LL G +G R ALP+S IMI
Sbjct: 69 ------GSTTAGFAIYDTMNYVRCDVSTICIGMAASMSAFLLAGGTRGKRCALPNSEIMI 122
Query: 207 KQ 208
Q
Sbjct: 123 HQ 124
>gi|350267685|ref|YP_004878992.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
subtilis subsp. spizizenii TU-B-10]
gi|349600572|gb|AEP88360.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
subtilis subsp. spizizenii TU-B-10]
Length = 198
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ ED EK I +YINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQ 124
>gi|350270328|ref|YP_004881636.1| ATP-dependent Clp protease proteolytic subunit [Oscillibacter
valericigenes Sjm18-20]
gi|348595170|dbj|BAK99130.1| ATP-dependent Clp protease proteolytic subunit [Oscillibacter
valericigenes Sjm18-20]
Length = 193
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 70/121 (57%), Gaps = 10/121 (8%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L +RIV+LG + L++A+ LYL+ +D +K I LYINS G G
Sbjct: 19 DIFSRLLNDRIVFLGEEVNATTASLVVAQLLYLEAQDPDKEIQLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ--AGDT 212
T+ AIYD M YVK + T+CVG A LL +GAKG R ALP++ IMI Q AG
Sbjct: 71 VTDGMAIYDTMQYVKCDVSTVCVGMCASMGAFLLSSGAKGKRIALPNAEIMIHQPSAGTQ 130
Query: 213 G 213
G
Sbjct: 131 G 131
>gi|326427885|gb|EGD73455.1| ATP-dependent Clp protease proteolytic subunit [Salpingoeca sp.
ATCC 50818]
Length = 267
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV L ++ LI A+ LYL+ E+ E+ I++YINS G G
Sbjct: 75 DIFSRLLRERIVCLMGPVNDELSSLITAQLLYLESENPEETIHMYINSPG--------GS 126
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T IYD M YVKP I TLCVG A +LLL AGAKG+R ALP S IM+ Q
Sbjct: 127 VTAGLGIYDTMQYVKPKIATLCVGQACSMGSLLLTAGAKGHRYALPHSRIMVHQ 180
>gi|318040432|ref|ZP_07972388.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CB0101]
Length = 200
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 76/135 (56%), Gaps = 10/135 (7%)
Query: 75 PVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
P+ T +P+ G+ +E+ D+ + L RI++LG ++ ++A+ LYL ED
Sbjct: 2 PIGTPSVPYRLPGSQYERWV-DIYTRLGVERILFLGSEVNDAIANSLVAQMLYLDSEDNS 60
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
KPIYLYINS G G T AIYD + YVK + T+CVG A A LLGAG K
Sbjct: 61 KPIYLYINSPG--------GSVTAGLAIYDTIQYVKSDVVTICVGLAASMGAFLLGAGTK 112
Query: 194 GNRAALPSSTIMIKQ 208
G R ALP S IMI Q
Sbjct: 113 GKRLALPHSRIMIHQ 127
>gi|161615359|ref|YP_001589324.1| hypothetical protein SPAB_03130 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197263975|ref|ZP_03164049.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|198242637|ref|YP_002214402.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|200390046|ref|ZP_03216657.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205357179|ref|ZP_02345490.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205359635|ref|ZP_02830941.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|224582286|ref|YP_002636084.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|375000176|ref|ZP_09724516.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
gi|375113375|ref|ZP_09758545.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|375117884|ref|ZP_09763051.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|378956164|ref|YP_005213651.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum/pullorum str.
RKS5078]
gi|417339754|ref|ZP_12121240.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
gi|417346821|ref|ZP_12126518.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
gi|417356090|ref|ZP_12131735.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|417363848|ref|ZP_12136955.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
gi|417371361|ref|ZP_12141962.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
gi|417379165|ref|ZP_12147614.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
gi|417388734|ref|ZP_12152775.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
gi|417451305|ref|ZP_12163046.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|417504469|ref|ZP_12174140.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|417525809|ref|ZP_12184553.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
gi|417537133|ref|ZP_12190097.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|161364723|gb|ABX68491.1| hypothetical protein SPAB_03130 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197242230|gb|EDY24850.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197937153|gb|ACH74486.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|199602491|gb|EDZ01037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205323485|gb|EDZ11324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205344194|gb|EDZ30958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|224466813|gb|ACN44643.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|322713521|gb|EFZ05092.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|326622151|gb|EGE28496.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|353074864|gb|EHB40624.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
gi|353578891|gb|EHC40596.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
gi|353597181|gb|EHC53972.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|353599186|gb|EHC55426.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
gi|353608251|gb|EHC61882.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
gi|353618300|gb|EHC69016.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
gi|353624600|gb|EHC73595.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
gi|353636599|gb|EHC82614.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|353651589|gb|EHC93636.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|353668979|gb|EHD06016.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|353669715|gb|EHD06539.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
gi|357206775|gb|AET54821.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum/pullorum str.
RKS5078]
gi|357959981|gb|EHJ83999.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
Length = 243
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 48 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 104
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 105 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 156
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 157 AKGKRFCLPNSRVMIHQ 173
>gi|379699669|ref|YP_005241397.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
gi|323128768|gb|ADX16198.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
Length = 246
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 51 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 107
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 108 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 159
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 160 AKGKRFCLPNSRVMIHQ 176
>gi|18310375|ref|NP_562309.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens str. 13]
gi|110799833|ref|YP_696088.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens ATCC 13124]
gi|110803073|ref|YP_698704.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens SM101]
gi|168207806|ref|ZP_02633811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens E str. JGS1987]
gi|168212102|ref|ZP_02637727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens B str. ATCC 3626]
gi|168215325|ref|ZP_02640950.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens CPE str. F4969]
gi|168217824|ref|ZP_02643449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens NCTC 8239]
gi|169342288|ref|ZP_02863366.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens C str. JGS1495]
gi|182627116|ref|ZP_02954834.1| CAAX amino terminal protease family protein [Clostridium
perfringens D str. JGS1721]
gi|422346059|ref|ZP_16426973.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens WAL-14572]
gi|422874317|ref|ZP_16920802.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens F262]
gi|21759067|sp|Q8XKK1.1|CLPP_CLOPE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|123146116|sp|Q0ST53.1|CLPP_CLOPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|123148745|sp|Q0TQK2.1|CLPP_CLOP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|18145055|dbj|BAB81099.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens str. 13]
gi|110674480|gb|ABG83467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens ATCC 13124]
gi|110683574|gb|ABG86944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens SM101]
gi|169299615|gb|EDS81674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens C str. JGS1495]
gi|170660863|gb|EDT13546.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens E str. JGS1987]
gi|170709986|gb|EDT22168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens B str. ATCC 3626]
gi|170713287|gb|EDT25469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens CPE str. F4969]
gi|177907505|gb|EDT70163.1| CAAX amino terminal protease family protein [Clostridium
perfringens D str. JGS1721]
gi|182380151|gb|EDT77630.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens NCTC 8239]
gi|373226681|gb|EHP49003.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens WAL-14572]
gi|380304794|gb|EIA17080.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens F262]
Length = 194
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 11/135 (8%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
S ++ MV+ TS + D+ S L K+RI+ L L++A+ L+L+ ED +
Sbjct: 2 SNLVPMVVEQTSKG---ERSYDIFSRLLKDRIIMLSGEVNDVTANLVVAQLLFLESEDPD 58
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
K I+LYINS G G T AIYD M Y+KP + T+C+G A A LL +GAK
Sbjct: 59 KDIHLYINSPG--------GSITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLSSGAK 110
Query: 194 GNRAALPSSTIMIKQ 208
G R ALP++ IMI Q
Sbjct: 111 GKRFALPNAEIMIHQ 125
>gi|336452884|ref|YP_004607350.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
bizzozeronii CIII-1]
gi|421881107|ref|ZP_16312455.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
bizzozeronii CCUG 35545]
gi|335332911|emb|CCB79638.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
bizzozeronii CIII-1]
gi|375316632|emb|CCF80451.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
bizzozeronii CCUG 35545]
Length = 197
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 69/129 (53%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
+PF T + D+ S L K+RIV L +V I+A+ L+L+ ED EK I LY
Sbjct: 4 VPFVIEKTGRGERSYDIYSRLLKDRIVLLSGEINDAVAATIVAQLLFLEAEDPEKDINLY 63
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T F+IYD M Y+ P I T+C+G A A LL G KG R +L
Sbjct: 64 INSPG--------GSVTSGFSIYDTMNYIHPDICTICIGQAASMGAFLLSCGTKGKRFSL 115
Query: 200 PSSTIMIKQ 208
P S IMI Q
Sbjct: 116 PHSRIMIHQ 124
>gi|167627759|ref|YP_001678259.1| ATP-dependent Clp protease proteolytic subunit [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|254876856|ref|ZP_05249566.1| ATP-dependent Clp protease subunit P [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|189082458|sp|B0TZA5.1|CLPP_FRAP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167597760|gb|ABZ87758.1| Endopeptidase Clp [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|254842877|gb|EET21291.1| ATP-dependent Clp protease subunit P [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 201
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 68/122 (55%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K RIV+L L++A+ L+L+ ED +K IY YINS G
Sbjct: 14 TAGGERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPG-- 71
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T +YD M ++KP + T+C+G A +LLL GAKG R +LPSS IMI
Sbjct: 72 ------GMVTAGMGVYDTMQFIKPDVNTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMI 125
Query: 207 KQ 208
Q
Sbjct: 126 HQ 127
>gi|157164595|ref|YP_001465991.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
concisus 13826]
gi|416113678|ref|ZP_11593429.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
concisus UNSWCD]
gi|112801723|gb|EAT99067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
concisus 13826]
gi|384578462|gb|EIF07727.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
concisus UNSWCD]
Length = 196
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T+ + D+ S L K+RIV L + I+A+ L+L+ ED +K IYLYINS G
Sbjct: 12 TSRGERSYDIYSRLLKDRIVMLSGEIEDGMAASIVAQLLFLEAEDPDKDIYLYINSPG-- 69
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T F+IYD M Y+KP + T+C+G A A LL GA G R ALP+S IMI
Sbjct: 70 ------GVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAPGKRYALPNSRIMI 123
Query: 207 KQ 208
Q
Sbjct: 124 HQ 125
>gi|437919283|ref|ZP_20850674.1| ATP-dependent Clp protease proteolytic subunit, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
6.0562-1]
gi|435313922|gb|ELO87441.1| ATP-dependent Clp protease proteolytic subunit, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
6.0562-1]
Length = 220
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 25 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 81
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 82 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 133
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 134 AKGKRFCLPNSRVMIHQ 150
>gi|289804604|ref|ZP_06535233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 228
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 48 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 104
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 105 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 156
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 157 AKGKRFCLPNSRVMIHQ 173
>gi|210634106|ref|ZP_03297994.1| hypothetical protein COLSTE_01912 [Collinsella stercoris DSM 13279]
gi|210158957|gb|EEA89928.1| endopeptidase Clp [Collinsella stercoris DSM 13279]
Length = 206
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 68/124 (54%), Gaps = 13/124 (10%)
Query: 90 EQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTG 144
EQ P D+ S L +RIV+LG L++A+ L+L+ +D EK I LYINS G
Sbjct: 15 EQTPRGERSYDIYSRLLNDRIVFLGEEVNSVTANLVIAQLLHLESQDAEKDISLYINSPG 74
Query: 145 TTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
G AI D M Y+KP + T+CVG A AA+LL GAKG R +LP S I
Sbjct: 75 --------GEVYSGLAILDTMNYIKPDVSTICVGMAASMAAVLLAGGAKGKRFSLPHSKI 126
Query: 205 MIKQ 208
MI Q
Sbjct: 127 MIHQ 130
>gi|395232657|ref|ZP_10410907.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter sp.
Ag1]
gi|394733059|gb|EJF32698.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter sp.
Ag1]
Length = 207
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 121 AKGKRFCLPNSRVMIHQ 137
>gi|292487467|ref|YP_003530339.1| ATP-dependent Clp protease proteolytic subunit ClpP [Erwinia
amylovora CFBP1430]
gi|292898709|ref|YP_003538078.1| ATP-dependent clp protease proteolytic subunit [Erwinia amylovora
ATCC 49946]
gi|428784402|ref|ZP_19001893.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora ACW56400]
gi|291198557|emb|CBJ45665.1| ATP-dependent clp protease proteolytic subunit [Erwinia amylovora
ATCC 49946]
gi|291552886|emb|CBA19931.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora CFBP1430]
gi|312171571|emb|CBX79829.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora ATCC BAA-2158]
gi|426275964|gb|EKV53691.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora ACW56400]
Length = 207
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 77/139 (55%), Gaps = 11/139 (7%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 10 TAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 67 ENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 190 AGAKGNRAALPSSTIMIKQ 208
AGAKG R LP+S +MI Q
Sbjct: 119 AGAKGKRYCLPNSRVMIHQ 137
>gi|268611241|ref|ZP_06144968.1| ATP-dependent Clp protease, protease subunit [Ruminococcus
flavefaciens FD-1]
Length = 196
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
++P+ T+ + D+ S L +RI+ L + L++A+ LYL+ +D EK I L
Sbjct: 4 LVPYVVEQTSRGERSYDIFSRLLNDRIIMLSDQVNDTTASLVVAQLLYLESQDPEKDISL 63
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T FAIYD M Y+K + T+C+G A A LL +GAKG R A
Sbjct: 64 YINSPG--------GSVTAGFAIYDTMNYIKCDVSTICIGMAASMGAFLLSSGAKGKRIA 115
Query: 199 LPSSTIMIKQ 208
LP+S IMI Q
Sbjct: 116 LPNSEIMIHQ 125
>gi|418799553|ref|ZP_13355219.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|392763871|gb|EJA20677.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
Length = 243
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 48 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 104
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 105 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 156
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 157 AKGKRFCLPNSRVMIHQ 173
>gi|261408153|ref|YP_003244394.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|261284616|gb|ACX66587.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
Length = 198
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++G + ++ I+A+ L+L ED EK I++YINS G G
Sbjct: 24 DIYSRLLKDRIVFVGAAIDDAIANSIIAQLLFLAAEDPEKDIHMYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ F IYD M +KP + T+C G A A+LL AGAKG R ALP+S IMI Q
Sbjct: 76 VSAGFGIYDTMQIIKPQVNTICTGFAASYGAILLLAGAKGKRLALPNSEIMIHQ 129
>gi|113475211|ref|YP_721272.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
gi|110166259|gb|ABG50799.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 203
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI+YLG + + LI+ + LYL ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRDRIIYLGEAIDSELANLIVGQLLYLDSEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ IYD M +V+P + T+C+G A A LL G KG R +LP S IMI Q
Sbjct: 69 VSAGMGIYDTMRHVRPDVCTICMGIAASMGAFLLSGGTKGKRMSLPHSRIMIHQ 122
>gi|434393622|ref|YP_007128569.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
gi|428265463|gb|AFZ31409.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
Length = 202
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG ++ LI+A+ L+L ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQIDSNLANLIVAQLLFLDAEDSEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P + T+C G A A LL AG KG R +LP++ IMI Q
Sbjct: 69 VTAGMGIFDTMNHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPNARIMIHQ 122
>gi|188534634|ref|YP_001908431.1| ATP-dependent Clp protease proteolytic subunit [Erwinia
tasmaniensis Et1/99]
gi|188029676|emb|CAO97555.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia
tasmaniensis Et1/99]
Length = 207
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 77/139 (55%), Gaps = 11/139 (7%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 10 TAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 67 ENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 190 AGAKGNRAALPSSTIMIKQ 208
AGAKG R LP+S +MI Q
Sbjct: 119 AGAKGKRYCLPNSRVMIHQ 137
>gi|291085757|ref|ZP_06571180.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Citrobacter
youngae ATCC 29220]
gi|291069764|gb|EFE07873.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Citrobacter
youngae ATCC 29220]
Length = 243
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R++++ + LI+A+
Sbjct: 44 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFMTGQVEDHMANLIVAQM 97
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 98 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 149
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 150 AFLLTAGAKGKRFCLPNSRVMIHQ 173
>gi|336113414|ref|YP_004568181.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 2-6]
gi|347750878|ref|YP_004858443.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 36D1]
gi|335366844|gb|AEH52795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 2-6]
gi|347583396|gb|AEO99662.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 36D1]
Length = 196
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V+ I+++ L+L+ E+ EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVSNSIVSQLLFLEAENPEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M +KP + T+CVG A ++LL AG KG R ALP+S +MI Q
Sbjct: 71 VTAGLAIYDTMQIIKPDVQTICVGMAASMGSVLLTAGTKGKRYALPNSEVMIHQ 124
>gi|427702649|ref|YP_007045871.1| protease subunit of ATP-dependent protease [Cyanobium gracile PCC
6307]
gi|427345817|gb|AFY28530.1| protease subunit of ATP-dependent protease [Cyanobium gracile PCC
6307]
Length = 203
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 74/135 (54%), Gaps = 10/135 (7%)
Query: 75 PVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
P+ T +P+ G+ +E+ D+ + L RI++LG + ++A+ LYL +D
Sbjct: 2 PIGTPSVPYRLPGSQYERWV-DIYTRLGVERILFLGQEVTDGIANSLVAQMLYLDSDDSS 60
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
KPIYLYINS G G T AIYD M YVK + T+CVG A A LL AG K
Sbjct: 61 KPIYLYINSPG--------GSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLAAGTK 112
Query: 194 GNRAALPSSTIMIKQ 208
G R ALP S IMI Q
Sbjct: 113 GKRLALPHSRIMIHQ 127
>gi|311069969|ref|YP_003974892.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
1942]
gi|398308397|ref|ZP_10511871.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mojavensis
RO-H-1]
gi|419821657|ref|ZP_14345250.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
C89]
gi|310870486|gb|ADP33961.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
1942]
gi|388474293|gb|EIM11023.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
C89]
Length = 198
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ ED EK I +YINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQ 124
>gi|296330330|ref|ZP_06872811.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305676065|ref|YP_003867737.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii str. W23]
gi|398304937|ref|ZP_10508523.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
vallismortis DV1-F-3]
gi|443630850|ref|ZP_21115031.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. inaquosorum KCTC 13429]
gi|296152598|gb|EFG93466.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305414309|gb|ADM39428.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii str. W23]
gi|443348655|gb|ELS62711.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. inaquosorum KCTC 13429]
Length = 198
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ ED EK I +YINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQ 124
>gi|387872212|ref|YP_005803593.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
pyrifoliae DSM 12163]
gi|283479306|emb|CAY75222.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
pyrifoliae DSM 12163]
Length = 218
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 77/139 (55%), Gaps = 11/139 (7%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 21 TAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEA 77
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 78 ENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 129
Query: 190 AGAKGNRAALPSSTIMIKQ 208
AGAKG R LP+S +MI Q
Sbjct: 130 AGAKGKRYCLPNSRVMIHQ 148
>gi|259909254|ref|YP_002649610.1| ATP-dependent Clp protease proteolytic subunit [Erwinia pyrifoliae
Ep1/96]
gi|224964876|emb|CAX56398.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia
pyrifoliae Ep1/96]
Length = 207
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 77/139 (55%), Gaps = 11/139 (7%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 10 TAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 67 ENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 190 AGAKGNRAALPSSTIMIKQ 208
AGAKG R LP+S +MI Q
Sbjct: 119 AGAKGKRYCLPNSRVMIHQ 137
>gi|42784300|ref|NP_981547.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10987]
gi|402554765|ref|YP_006596036.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
FRI-35]
gi|67460499|sp|Q72XW9.1|CLPP2_BACC1 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|42740231|gb|AAS44155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus ATCC 10987]
gi|401795975|gb|AFQ09834.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
FRI-35]
Length = 193
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ +D +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQ 124
>gi|196010065|ref|XP_002114897.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190582280|gb|EDV22353.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 226
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 77/138 (55%), Gaps = 12/138 (8%)
Query: 72 PR-SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYE 130
PR SP++ +VI T + D+ S L K+RIV + + L++A+ L+LQ E
Sbjct: 22 PRISPLVPIVI---EKTGRGEQAYDIYSRLLKDRIVCVMGPVTDDLASLVVAQLLFLQAE 78
Query: 131 DVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGA 190
+ PI++YINS G G T IYD M YV+PPI+T CVG A +LLL A
Sbjct: 79 SSKLPIHMYINSPG--------GSVTSGLGIYDTMQYVEPPIYTWCVGQAASMGSLLLAA 130
Query: 191 GAKGNRAALPSSTIMIKQ 208
G G R +LP+S IMI Q
Sbjct: 131 GDNGKRHSLPNSRIMIHQ 148
>gi|387890168|ref|YP_006320466.1| ATP-dependent Clp protease proteolytic subunit [Escherichia blattae
DSM 4481]
gi|414595522|ref|ZP_11445141.1| ATP-dependent Clp protease proteolytic subunit [Escherichia blattae
NBRC 105725]
gi|386925001|gb|AFJ47955.1| ATP-dependent Clp protease proteolytic subunit [Escherichia blattae
DSM 4481]
gi|403193485|dbj|GAB82793.1| ATP-dependent Clp protease proteolytic subunit [Escherichia blattae
NBRC 105725]
Length = 207
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 78/144 (54%), Gaps = 14/144 (9%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D F P ++ MV+ TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DQFA---PHMALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL AGAKG R LP+S +MI Q
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQ 137
>gi|329922862|ref|ZP_08278378.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
gi|328941635|gb|EGG37920.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
Length = 193
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++G + ++ I+A+ L+L ED EK I++YINS G G
Sbjct: 19 DIYSRLLKDRIVFVGAAIDDAIANSIIAQLLFLAAEDPEKDIHMYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ F IYD M +KP + T+C G A A+LL AGAKG R ALP+S IMI Q
Sbjct: 71 VSAGFGIYDTMQIIKPQVNTICTGFAASYGAILLLAGAKGKRLALPNSEIMIHQ 124
>gi|260768947|ref|ZP_05877881.1| ATP-dependent Clp protease proteolytic subunit [Vibrio furnissii
CIP 102972]
gi|375131469|ref|YP_004993569.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
furnissii NCTC 11218]
gi|260616977|gb|EEX42162.1| ATP-dependent Clp protease proteolytic subunit [Vibrio furnissii
CIP 102972]
gi|315180643|gb|ADT87557.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
furnissii NCTC 11218]
Length = 208
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 9/144 (6%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP+I ++P T+ + D+ S L K+R+++L + L++A+
Sbjct: 2 SYQEKNVMSPIIDALVPMVVEQTSRGERSYDIYSRLLKDRVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + TLC+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTLCIGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL GA G R LP+S +MI Q
Sbjct: 114 AFLLAGGAPGKRYVLPNSRVMIHQ 137
>gi|33862587|ref|NP_894147.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9313]
gi|67460518|sp|Q7V8M4.1|CLPP2_PROMM RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33634503|emb|CAE20489.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9313]
Length = 200
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ + L RI++LG V ++A+ LYL ED KPIYLYINS G G
Sbjct: 22 DIYTRLGVERILFLGQEVSDGVANSLVAQMLYLDSEDSTKPIYLYINSPG--------GS 73
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVK + T+CVG A A LL AG KG R ALP S IMI Q
Sbjct: 74 VTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPHSRIMIHQ 127
>gi|154175235|ref|YP_001407437.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
curvus 525.92]
gi|402546507|ref|ZP_10843382.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Campylobacter sp. FOBRC14]
gi|112803266|gb|EAU00610.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
curvus 525.92]
gi|401017320|gb|EJP76081.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Campylobacter sp. FOBRC14]
Length = 196
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T+ + D+ S L K+RIV L + I+A+ L+L+ ED EK IYLYINS G
Sbjct: 12 TSRGERSYDIYSRLLKDRIVMLSGEIEDGMAASIVAQLLFLEAEDPEKDIYLYINSPG-- 69
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T F+I+D M Y+KP + T+C+G A A LL GA G R ALP+S IMI
Sbjct: 70 ------GVITSGFSIFDTMNYIKPDVCTICIGQAASMGAFLLSCGAPGKRYALPNSRIMI 123
Query: 207 KQ 208
Q
Sbjct: 124 HQ 125
>gi|428776590|ref|YP_007168377.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
gi|428690869|gb|AFZ44163.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
Length = 200
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 62/109 (56%), Gaps = 8/109 (7%)
Query: 100 LYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAF 159
LY+ RI++LG S+ ++A LYL ED KPIYLYINS G G +
Sbjct: 27 LYRERIIFLGRGINDSLANQVIAVMLYLDSEDPSKPIYLYINSPG--------GSVSAGM 78
Query: 160 AIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
AIYD M ++K + T+CVG A A LL AG KG R ALP S IMI Q
Sbjct: 79 AIYDTMQHIKSEVVTICVGIAASMGAFLLSAGTKGKRLALPHSRIMIHQ 127
>gi|16332037|ref|NP_442765.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
gi|383323780|ref|YP_005384634.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326949|ref|YP_005387803.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492833|ref|YP_005410510.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384438101|ref|YP_005652826.1| ATP-dependent protease [Synechocystis sp. PCC 6803]
gi|451816189|ref|YP_007452641.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
gi|1705930|sp|P54416.1|CLPP1_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|1001349|dbj|BAA10836.1| ATP-dependent protease; ClpP [Synechocystis sp. PCC 6803]
gi|339275134|dbj|BAK51621.1| ATP-dependent protease [Synechocystis sp. PCC 6803]
gi|359273100|dbj|BAL30619.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276270|dbj|BAL33788.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279440|dbj|BAL36957.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960326|dbj|BAM53566.1| ATP-dependent protease ClpP [Bacillus subtilis BEST7613]
gi|451782158|gb|AGF53127.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
Length = 198
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG L++A+ L+L+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQEVRDENANLVVAQLLFLEAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ I+D M ++P + T+C+G A A LL AGAKG R +LP+S IMI Q
Sbjct: 69 VSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQ 122
>gi|421083044|ref|ZP_15543923.1| Putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Pectobacterium wasabiae CFBP 3304]
gi|401702270|gb|EJS92514.1| Putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Pectobacterium wasabiae CFBP 3304]
Length = 207
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
+ P ++ MV+ TS + D+ S L K RI++L + L++A+ L+L+
Sbjct: 9 RQAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDYMANLVVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
AGAKG R LP+S +MI Q
Sbjct: 118 TAGAKGKRICLPNSRVMIHQ 137
>gi|127513436|ref|YP_001094633.1| ATP-dependent Clp protease proteolytic subunit [Shewanella loihica
PV-4]
gi|171855248|sp|A3QFX6.1|CLPP_SHELP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|126638731|gb|ABO24374.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
loihica PV-4]
Length = 203
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 75/140 (53%), Gaps = 8/140 (5%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
++ P S + +V TA + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 2 QNAPESVLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLE 61
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E +K IYLYINS G G T AIYD M ++KP + T+C+G A A LL
Sbjct: 62 SESPDKDIYLYINSPG--------GSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLL 113
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
GAKG R LP+S +MI Q
Sbjct: 114 AGGAKGKRHCLPNSRVMIHQ 133
>gi|391342988|ref|XP_003745797.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Metaseiulus occidentalis]
Length = 231
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + L++A+ L+LQ E +KPI+LYINS G G
Sbjct: 43 DIYSRLLKERIICLMGPINDDIASLVVAQLLFLQSESSKKPIHLYINSPG--------GS 94
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T IYD M YV PPI T CVG A A+LLL AG +G R +LP+S IM+ Q
Sbjct: 95 VTAGLGIYDTMQYVLPPISTWCVGQACSAASLLLAAGEQGMRHSLPNSRIMVHQ 148
>gi|237753395|ref|ZP_04583875.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
winghamensis ATCC BAA-430]
gi|229375662|gb|EEO25753.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
winghamensis ATCC BAA-430]
Length = 196
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L + I+A+ L+L+ ED EK IYLYINS G G
Sbjct: 20 DIYSRLLKDRIILLSGQIDDGLASSIVAQLLFLEAEDPEKDIYLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T +IYD M YVKP I T+C+G A A LL G KG R +LP+S IMI Q
Sbjct: 72 VTSGLSIYDTMNYVKPDISTICIGQAASMGAFLLSCGTKGKRYSLPNSRIMIHQ 125
>gi|124023703|ref|YP_001018010.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9303]
gi|123963989|gb|ABM78745.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9303]
Length = 200
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ + L RI++LG V ++A+ LYL ED KPIYLYINS G G
Sbjct: 22 DIYTRLGVERILFLGQEVSDGVANSLVAQMLYLDSEDSTKPIYLYINSPG--------GS 73
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVK + T+CVG A A LL AG KG R ALP S IMI Q
Sbjct: 74 VTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPHSRIMIHQ 127
>gi|227328849|ref|ZP_03832873.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 207
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
+ P ++ MV+ TS + D+ S L K RI++L + L++A+ L+L+
Sbjct: 9 RQAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDYMANLVVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
AGAKG R LP+S +MI Q
Sbjct: 118 TAGAKGKRICLPNSRVMIHQ 137
>gi|427733872|ref|YP_007053416.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rivularia sp.
PCC 7116]
gi|427368913|gb|AFY52869.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rivularia sp.
PCC 7116]
Length = 201
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI++LG +V LI+A+ L L ED EK IY+YINS G G
Sbjct: 17 DIYSRLLRDRIIFLGQPIDSNVANLIVAQMLLLDAEDAEKDIYMYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P I T+C G A A LL AG KG R +LP S IMI Q
Sbjct: 69 VTAGMGIFDTMRHIRPDICTICTGLAASMGAFLLTAGTKGKRMSLPHSRIMIHQ 122
>gi|365838987|ref|ZP_09380240.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaeroglobus geminatus F0357]
gi|364566008|gb|EHM43714.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaeroglobus geminatus F0357]
Length = 202
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++L +V I+A+ L+L+ ++ +K I+LYINS G G
Sbjct: 21 DIYSRLLKDRIIFLTGGIDDTVANSIIAQLLFLEADNPDKDIHLYINSPG--------GV 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T A+YD M Y+KP + T+CVG+A A++LL AG KG R ALP S +MI Q
Sbjct: 73 VTAGMAVYDTMQYIKPDVSTICVGSAASMASVLLTAGTKGKRFALPHSQVMIHQ 126
>gi|229916596|ref|YP_002885242.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Exiguobacterium sp. AT1b]
gi|229468025|gb|ACQ69797.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Exiguobacterium sp. AT1b]
Length = 191
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 79 MVIP-FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M+IP T + D+ S L K+RI+ LG + +V I+A+ L+L ED EK I
Sbjct: 1 MLIPTVIEQTGRGERAYDIYSRLLKDRIILLGSAIDDNVANSIVAQLLFLAAEDPEKDIS 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M ++KP + T+C+G A A LL AG KG R
Sbjct: 61 LYINSPG--------GSITAGMAIYDTMNFIKPNVSTICIGMAASMGAFLLQAGEKGKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP++ IMI Q
Sbjct: 113 ALPNAEIMIHQ 123
>gi|72382719|ref|YP_292074.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL2A]
gi|124026440|ref|YP_001015555.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL1A]
gi|115311347|sp|Q46JF7.1|CLPP2_PROMT RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|72002569|gb|AAZ58371.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
gi|123961508|gb|ABM76291.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
Length = 200
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ + L RI++LG + ++A+ LYL ED KPIYLYINS G G
Sbjct: 22 DIYTRLGAERILFLGQEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPG--------GS 73
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVK + T+CVG A A LL AG KG R ALP S IMI Q
Sbjct: 74 VTAGLAIYDTMKYVKSDLVTICVGLAASMGAFLLSAGTKGKRLALPHSRIMIHQ 127
>gi|225019943|ref|ZP_03709135.1| hypothetical protein CLOSTMETH_03897 [Clostridium methylpentosum
DSM 5476]
gi|224947307|gb|EEG28516.1| hypothetical protein CLOSTMETH_03897 [Clostridium methylpentosum
DSM 5476]
Length = 188
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L +RI+ L + L++A+ LYL+ +D EK I LYINS G G
Sbjct: 14 DIYSRLLNDRIIMLSDEVNDATASLVVAQLLYLEAQDPEKDIQLYINSPG--------GS 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+K + T+C+G A A LL AGAKG R ALP+S IMI Q
Sbjct: 66 ITSGMAIYDTMNYIKSDVSTICIGMAASMGAFLLSAGAKGKRLALPNSEIMIHQ 119
>gi|423608926|ref|ZP_17584817.1| ATP-dependent Clp protease proteolytic subunit 2, partial [Bacillus
cereus VD102]
gi|401236333|gb|EJR42794.1| ATP-dependent Clp protease proteolytic subunit 2, partial [Bacillus
cereus VD102]
Length = 134
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ +D EK I++YINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQ 124
>gi|225378750|ref|ZP_03755971.1| hypothetical protein ROSEINA2194_04420 [Roseburia inulinivorans DSM
16841]
gi|225209409|gb|EEG91763.1| hypothetical protein ROSEINA2194_04420 [Roseburia inulinivorans DSM
16841]
Length = 202
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + L++A+ L+L+ ED K I+LYINS G G
Sbjct: 28 DIYSRLLKDRIIFLGEEVNETTASLVVAQLLFLESEDPGKDIHLYINSPG--------GM 79
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+K + T+C+G A A LL GAKG R ALP++ IMI Q
Sbjct: 80 VTAGLAIYDTMQYIKCDVSTICIGMAASMGAFLLAGGAKGKRLALPNAEIMIHQ 133
>gi|284044102|ref|YP_003394442.1| ATP-dependent Clp protease proteolytic subunit ClpP [Conexibacter
woesei DSM 14684]
gi|283948323|gb|ADB51067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Conexibacter
woesei DSM 14684]
Length = 194
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 76/135 (56%), Gaps = 11/135 (8%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP++ MV+ TS + D+ S L RI++LG + LI+A+ L+L+ ED +
Sbjct: 2 SPLVPMVVEQTS---RGERAFDIYSRLLNERIIFLGTPVDDQIANLIVAQLLHLESEDPD 58
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
K I +YINS G G AIYD M ++KP + T+CVG A ALLL GA+
Sbjct: 59 KDISIYINSPG--------GSVYAGLAIYDTMQFIKPDVQTICVGIAMSMGALLLSGGAR 110
Query: 194 GNRAALPSSTIMIKQ 208
G R ALP++ I+I Q
Sbjct: 111 GKRMALPNAKILIHQ 125
>gi|238919011|ref|YP_002932525.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Edwardsiella ictaluri 93-146]
gi|259585951|sp|C5BCJ6.1|CLPP_EDWI9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238868579|gb|ACR68290.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Edwardsiella ictaluri 93-146]
Length = 206
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 8/143 (5%)
Query: 66 SFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFL 125
S+ + +P + +V T+ + D+ S L K RI++L + LI+A+ L
Sbjct: 2 SYSDQRELAPHMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQML 61
Query: 126 YLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAA 185
+L+ E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A +
Sbjct: 62 FLEAENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGS 113
Query: 186 LLLGAGAKGNRAALPSSTIMIKQ 208
LL AGA+G R LP+S +MI Q
Sbjct: 114 FLLAAGAQGKRFCLPNSRVMIHQ 136
>gi|157273309|gb|ABV27208.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Chloracidobacterium thermophilum]
Length = 199
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 74/137 (54%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P + +I MVI T + D+ S L K+ I+++ +V L++A+ L+L+ ED
Sbjct: 4 PTAALIPMVI---EQTGRGERAYDIYSRLLKDNIIFISTPIDDTVASLVVAQLLFLESED 60
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
E+ I +YINS G G T AIYD M +VKP I T CVG ALLL AG
Sbjct: 61 PERDISIYINSPG--------GSVTAGMAIYDTMQFVKPDIVTFCVGQCASMGALLLAAG 112
Query: 192 AKGNRAALPSSTIMIKQ 208
KG R ALP S I+I Q
Sbjct: 113 TKGKRYALPHSRILIHQ 129
>gi|451967071|ref|ZP_21920318.1| ATP-dependent Clp protease proteolytic subunit [Edwardsiella tarda
NBRC 105688]
gi|451314224|dbj|GAC65680.1| ATP-dependent Clp protease proteolytic subunit [Edwardsiella tarda
NBRC 105688]
Length = 206
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 8/143 (5%)
Query: 66 SFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFL 125
S+ + +P + +V T+ + D+ S L K RI++L + LI+A+ L
Sbjct: 2 SYSDQRELAPHMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQML 61
Query: 126 YLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAA 185
+L+ E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A +
Sbjct: 62 FLEAENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGS 113
Query: 186 LLLGAGAKGNRAALPSSTIMIKQ 208
LL AGA+G R LP+S +MI Q
Sbjct: 114 FLLAAGAQGKRFCLPNSRVMIHQ 136
>gi|34558484|ref|NP_908299.1| ATP-dependent Clp protease proteolytic subunit [Wolinella
succinogenes DSM 1740]
gi|60389700|sp|Q7M7M3.1|CLPP_WOLSU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|34481778|emb|CAE11199.1| ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT [Wolinella
succinogenes]
Length = 195
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ T + D+ S L K+RI+ L V I+++ L+L+ ED EK IYLY
Sbjct: 4 IPYVIEKTGRGERSYDIYSRLLKDRIIMLSGEINDGVASSIVSQMLFLEAEDPEKDIYLY 63
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T +IYD M YVKP I T+C+G A A LL G KG R +L
Sbjct: 64 INSPG--------GVITSGMSIYDTMNYVKPDICTICIGQAASMGAFLLSCGTKGKRFSL 115
Query: 200 PSSTIMIKQ 208
P+S IMI Q
Sbjct: 116 PNSRIMIHQ 124
>gi|307129927|ref|YP_003881943.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Dickeya dadantii 3937]
gi|306527456|gb|ADM97386.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Dickeya dadantii 3937]
Length = 207
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 76/140 (54%), Gaps = 11/140 (7%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
K P ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 9 KQAPHMALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQ 208
AG KG R LP+S +MI Q
Sbjct: 118 TAGTKGKRFCLPNSRVMIHQ 137
>gi|337755601|ref|YP_004648112.1| ATP-dependent Clp protease proteolytic subunit [Francisella sp.
TX077308]
gi|336447206|gb|AEI36512.1| ATP-dependent Clp protease proteolytic subunit [Francisella sp.
TX077308]
Length = 201
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 68/122 (55%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K RIV+L L++A+ L+L+ ED +K IY YINS G
Sbjct: 14 TAGGERAFDIYSRLLKERIVFLNGEVNDQSANLVIAQLLFLESEDPDKDIYFYINSPG-- 71
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T +YD M ++KP + T+C+G A +LLL GAKG R +LPSS IMI
Sbjct: 72 ------GMVTAGMGVYDTMQFIKPDVNTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMI 125
Query: 207 KQ 208
Q
Sbjct: 126 HQ 127
>gi|449663896|ref|XP_002163612.2| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Hydra magnipapillata]
Length = 170
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV L +V+ +++A+ L+LQ E +KPI++YINS G G
Sbjct: 16 DIYSRLLKERIVCLFGGIDDNVSSVVVAQLLFLQSESRKKPIHMYINSPG--------GV 67
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M +++PPI T CVG A +LLL +G+KG R ALP S IM+ Q
Sbjct: 68 VTAGLAIYDTMQFIEPPIATWCVGQACSMGSLLLASGSKGLRHALPHSRIMLHQ 121
>gi|374301124|ref|YP_005052763.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
africanus str. Walvis Bay]
gi|332554060|gb|EGJ51104.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
africanus str. Walvis Bay]
Length = 206
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI+ LG + LI A+ L+L+ ED +K IY+YINS G G
Sbjct: 21 DIYSRLLRDRIILLGYPIDDHIAGLICAQLLFLESEDPDKEIYMYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD MGY+ P+ TLC+G A A LL +G KG R +LP+S I+I Q
Sbjct: 73 VTAGMAIYDTMGYISCPVSTLCIGQAASMGAFLLSSGTKGMRFSLPNSRILIHQ 126
>gi|427724133|ref|YP_007071410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
gi|427355853|gb|AFY38576.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
Length = 199
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + LI+A+ L+L+ +D EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVNDEIANLIVAQLLFLEADDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ I+D M V+P + T+C+G A A LL AG KG R +LP+S IMI Q
Sbjct: 69 VSAGMGIFDTMNQVRPDVCTICIGLAASMGAFLLSAGEKGKRMSLPNSRIMIHQ 122
>gi|434393186|ref|YP_007128133.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
gi|428265027|gb|AFZ30973.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
Length = 197
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P + +P + T W D+ + LY+ RI++LG + I+A LYL ED K
Sbjct: 6 PKVPYRMPGEAYTQW----IDIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGK 61
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
IYLYINS G G T AIYD M ++K + T+CVG A + LL AG KG
Sbjct: 62 DIYLYINSPG--------GMVTSGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKG 113
Query: 195 NRAALPSSTIMIKQ 208
R ALP S IMI Q
Sbjct: 114 KRLALPHSRIMIHQ 127
>gi|428201398|ref|YP_007079987.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
gi|427978830|gb|AFY76430.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
Length = 272
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG V + I+A+ LYL ED EK I LYINS G G
Sbjct: 85 DIYSRLLRERIVFLGTPIDDKVADSIVAQLLYLDAEDPEKDIQLYINSPG--------GS 136
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
FAIYD M V+P + T+C G A A LL GAKG R ALPS+ +MI Q
Sbjct: 137 VYAGFAIYDAMQQVRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSARLMIHQ 190
>gi|125540417|gb|EAY86812.1| hypothetical protein OsI_08189 [Oryza sativa Indica Group]
Length = 318
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV + L++A+ L+L+ E+ KP++LYINS G G
Sbjct: 89 DIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPG--------GV 140
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y++ P+ TLC+G A +LLL AGA+G R ALP++ +MI Q
Sbjct: 141 VTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGARGERRALPNARVMIHQ 194
>gi|427797853|gb|JAA64378.1| Putative atp-dependent clp protease proteolytic subunit, partial
[Rhipicephalus pulchellus]
Length = 278
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 76/139 (54%), Gaps = 8/139 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
S S ++ + F + ++P D+ S L K RIV + ++ L++A+ L+LQ
Sbjct: 70 SDEMSSLVVAQLLFLQSESNKKPXXDIYSRLLKERIVCVMGPISDEMSSLVVAQLLFLQS 129
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E +KP+++YINS G G T IYD M Y+ PPI T C+G A A+LLL
Sbjct: 130 ESNKKPVHMYINSPG--------GSVTAGLGIYDTMQYIMPPIATWCIGQACSAASLLLC 181
Query: 190 AGAKGNRAALPSSTIMIKQ 208
AG G R +LP+S IM+ Q
Sbjct: 182 AGTPGMRQSLPNSRIMVHQ 200
>gi|427728056|ref|YP_007074293.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
gi|427363975|gb|AFY46696.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
Length = 203
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG ++ LI+A+ L+L ED EK IYLYINS G G
Sbjct: 18 DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M ++P + T+C G A A LL AGAKG R +LP S IMI Q
Sbjct: 70 VTAGMGIFDTMKQIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 123
>gi|386815716|ref|ZP_10102934.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thiothrix
nivea DSM 5205]
gi|386420292|gb|EIJ34127.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thiothrix
nivea DSM 5205]
Length = 204
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 77/138 (55%), Gaps = 11/138 (7%)
Query: 71 KPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYE 130
+PR+ + MVI +A + D+ S L + R+++ + LI+A+ L+L+ E
Sbjct: 8 EPRAVGVPMVI---EQSARGERAFDIYSRLLRERVIFCVGEVEDYMANLIVAQLLFLESE 64
Query: 131 DVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGA 190
+ EK I+LYINS G G T AIYD M ++KP + TLC+G A A+LL
Sbjct: 65 NPEKDIHLYINSPG--------GVITSGMAIYDTMQFIKPDVSTLCIGQAASMGAVLLAG 116
Query: 191 GAKGNRAALPSSTIMIKQ 208
GAKG R ALP S +MI Q
Sbjct: 117 GAKGKRFALPHSRVMIHQ 134
>gi|377576799|ref|ZP_09805783.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
hermannii NBRC 105704]
gi|377542831|dbj|GAB50948.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
hermannii NBRC 105704]
Length = 207
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVVEQTS---RGERSYDIFSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 121 AKGKRFCLPNSRVMIHQ 137
>gi|251794211|ref|YP_003008942.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
gi|247541837|gb|ACS98855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
Length = 195
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V I+A+ L+L ED EK I LYINS G G
Sbjct: 21 DIYSRLLKDRIIFLGSGVNDVVANSIIAQMLFLAAEDPEKDISLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+CVG A A LL AGA G R ALP+S +MI Q
Sbjct: 73 ITAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLTAGAIGKRYALPNSEVMIHQ 126
>gi|33861870|ref|NP_893431.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|67460515|sp|Q7V0F1.1|CLPP2_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33640238|emb|CAE19773.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 201
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 75/135 (55%), Gaps = 10/135 (7%)
Query: 75 PVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
P+ T +P+ G+ +E+ D+ + L RI++LG + ++A+ LYL +D
Sbjct: 2 PIGTPSVPYRLPGSQYERWV-DIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNT 60
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
KPIYLYINS G G T AIYD + YVK + T+CVG A A LLGAG K
Sbjct: 61 KPIYLYINSPG--------GSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLGAGTK 112
Query: 194 GNRAALPSSTIMIKQ 208
G R ALP S IMI Q
Sbjct: 113 GKRVALPHSRIMIHQ 127
>gi|416052901|ref|ZP_11578536.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
gi|347991693|gb|EGY33156.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
Length = 188
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T+ + D+ S L K+R+++L ++ LI+A+ L+L+ ED +K I LYINS G
Sbjct: 6 TSRGERAYDIYSRLLKDRVIFLSGEVEDNMANLIVAQLLFLESEDPDKDINLYINSPG-- 63
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M ++KP + TLC+G A A LL GA G R ALP + +MI
Sbjct: 64 ------GSVTAGMAIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGATGKRGALPHARVMI 117
Query: 207 KQ 208
Q
Sbjct: 118 HQ 119
>gi|217077313|ref|YP_002335031.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus TCF52B]
gi|419759889|ref|ZP_14286174.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus H17ap60334]
gi|217037168|gb|ACJ75690.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosipho
africanus TCF52B]
gi|407514928|gb|EKF49714.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus H17ap60334]
Length = 201
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + V L++A+ L+L+ ED +K I LYINS G G
Sbjct: 24 DIYSRLLKDRIVFLGSAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ AIYD M Y+K + T+C+G A A+LL G KG R +LP+S IMI Q
Sbjct: 76 VSAGLAIYDTMQYIKCDVATICIGQAASMGAVLLAGGTKGKRFSLPNSRIMIHQ 129
>gi|193212075|ref|YP_001998028.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobaculum
parvum NCIB 8327]
gi|193085552|gb|ACF10828.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobaculum
parvum NCIB 8327]
Length = 225
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 76/135 (56%), Gaps = 11/135 (8%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
+ ++ MVI TSG + D+ S L + RI++LG V LI+A+ ++L+ ED E
Sbjct: 26 NQLVPMVIE-TSGRG--ERAFDIFSRLLRERIIFLGSPIDEHVAGLIMAQLIFLESEDPE 82
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
+ IY+Y+NS G G + IYD M Y++P I T+CVG A A LL +G
Sbjct: 83 RDIYIYVNSPG--------GSVSAGLGIYDTMQYIRPDISTVCVGMAASMGAFLLASGTA 134
Query: 194 GNRAALPSSTIMIKQ 208
G RA+LP S IMI Q
Sbjct: 135 GKRASLPHSRIMIHQ 149
>gi|123966708|ref|YP_001011789.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9515]
gi|123201074|gb|ABM72682.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
Length = 201
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 75/135 (55%), Gaps = 10/135 (7%)
Query: 75 PVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
P+ T +P+ G+ +E+ D+ + L RI++LG + ++A+ LYL +D
Sbjct: 2 PIGTPSVPYRLPGSQYERWV-DIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNT 60
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
KPIYLYINS G G T AIYD + YVK + T+CVG A A LLGAG K
Sbjct: 61 KPIYLYINSPG--------GSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLGAGTK 112
Query: 194 GNRAALPSSTIMIKQ 208
G R ALP S IMI Q
Sbjct: 113 GKRVALPHSRIMIHQ 127
>gi|307250531|ref|ZP_07532475.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306857424|gb|EFM89536.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 172
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAI 161
K RI++L + LI+A+ L+L+ ED EK IYLYINS G G T AI
Sbjct: 2 KERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG--------GVVTAGLAI 53
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
YD M ++KP + TLC G A A LL GAKG R ALP++ +MI Q
Sbjct: 54 YDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQ 100
>gi|385787570|ref|YP_005818679.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia sp.
Ejp617]
gi|310766842|gb|ADP11792.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia sp.
Ejp617]
Length = 215
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 77/139 (55%), Gaps = 11/139 (7%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 18 TAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEA 74
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 75 ENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 126
Query: 190 AGAKGNRAALPSSTIMIKQ 208
AGAKG R LP+S +MI Q
Sbjct: 127 AGAKGKRYCLPNSRVMIHQ 145
>gi|242309637|ref|ZP_04808792.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
pullorum MIT 98-5489]
gi|239523638|gb|EEQ63504.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
pullorum MIT 98-5489]
Length = 196
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L + I+A+ L+L+ ED +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIMLSGQIDDGIASSIVAQLLFLEAEDPQKDIYLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T +IYD M Y+KP I T+C+G A A LL G KG R +LP+S IMI Q
Sbjct: 72 VTSGLSIYDTMNYIKPDICTICIGQAASMGAFLLSCGTKGKRYSLPNSRIMIHQ 125
>gi|125582984|gb|EAZ23915.1| hypothetical protein OsJ_07636 [Oryza sativa Japonica Group]
Length = 318
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV + L++A+ L+L+ E+ KP++LYINS G G
Sbjct: 89 DIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPG--------GV 140
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y++ P+ TLC+G A +LLL AGA+G R ALP++ +MI Q
Sbjct: 141 VTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGARGERRALPNARVMIHQ 194
>gi|443315652|ref|ZP_21045132.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
gi|442784746|gb|ELR94606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
Length = 201
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG LI+A+ L+L+ ED EK IYLY+NS G G
Sbjct: 17 DIYSRLLRERIIFLGQEVTSDSANLIVAQMLFLEAEDPEKDIYLYVNSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P + T+CVG A + LL AG KG R +LP++ IMI Q
Sbjct: 69 VTAGLGIFDTMNHIRPDVCTICVGLAASMGSFLLAAGKKGKRMSLPNARIMIHQ 122
>gi|419589026|ref|ZP_14124837.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
317/04]
gi|380568626|gb|EIA91090.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
317/04]
Length = 194
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 9/131 (6%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M IP+ ++ + D+ S L K+RI+ L + I+A+ L+L+ ED K IY
Sbjct: 1 MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T F+IYD M Y+KP + T+C+G A A LL G +G R
Sbjct: 61 LYINSPG--------GVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGTEGKRF 112
Query: 198 ALPSSTIMIKQ 208
ALP+S IMI Q
Sbjct: 113 ALPNSRIMIHQ 123
>gi|343504824|ref|ZP_08742498.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
ichthyoenteri ATCC 700023]
gi|343510911|ref|ZP_08748102.1| ATP-dependent Clp protease proteolytic subunit [Vibrio scophthalmi
LMG 19158]
gi|343517340|ref|ZP_08754346.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. N418]
gi|342793664|gb|EGU29454.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. N418]
gi|342799857|gb|EGU35407.1| ATP-dependent Clp protease proteolytic subunit [Vibrio scophthalmi
LMG 19158]
gi|342810440|gb|EGU45523.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
ichthyoenteri ATCC 700023]
Length = 204
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 9/139 (6%)
Query: 71 KPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ ++ ++ ++P T+ + D+ S L K RI++L ++ L++A+ L+L+
Sbjct: 4 QEQNTIMNALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDNMANLVVAQLLFLES 63
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ +K I+LYINS G G T AIYD M ++KP + TLC G A A LL
Sbjct: 64 ENPDKDIFLYINSPG--------GSVTAGMAIYDTMQFIKPNVSTLCTGQACSMGAFLLA 115
Query: 190 AGAKGNRAALPSSTIMIKQ 208
GAKG R ALP+S +MI Q
Sbjct: 116 GGAKGKRFALPNSRVMIHQ 134
>gi|170077811|ref|YP_001734449.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
PCC 7002]
gi|169885480|gb|ACA99193.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 199
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 62/109 (56%), Gaps = 8/109 (7%)
Query: 100 LYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAF 159
LY+ RI++LG ++ I+A LYL ED KPIYLYINS G G T
Sbjct: 27 LYRERIIFLGRGVNDALANQIIAIMLYLDSEDPSKPIYLYINSPG--------GSVTAGL 78
Query: 160 AIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
AIYD M ++K + T+CVG A A LL AG KG R ALP S IMI Q
Sbjct: 79 AIYDTMKHIKSEVVTICVGLAASMGAFLLSAGTKGKRLALPHSRIMIHQ 127
>gi|343503058|ref|ZP_08740893.1| ATP-dependent Clp protease proteolytic subunit [Vibrio tubiashii
ATCC 19109]
gi|418480506|ref|ZP_13049564.1| ATP-dependent Clp protease proteolytic subunit [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
gi|342812728|gb|EGU47720.1| ATP-dependent Clp protease proteolytic subunit [Vibrio tubiashii
ATCC 19109]
gi|384571898|gb|EIF02426.1| ATP-dependent Clp protease proteolytic subunit [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
Length = 208
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 9/144 (6%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP++ ++P T+ + D+ S L K RI++L + L++A+
Sbjct: 2 SYQEKNAMSPILNALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDQMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M Y+KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQYIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQ 208
A LL GA G R LP+S +MI Q
Sbjct: 114 AFLLAGGAPGKRHVLPNSRVMIHQ 137
>gi|443324640|ref|ZP_21053379.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
gi|442795739|gb|ELS05087.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
Length = 199
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 100 LYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAF 159
LY+ RI++LG + I+A LYL ED KPIYLYINS G G T
Sbjct: 27 LYRERIIFLGRGVNDGIANQIIAIMLYLDSEDSSKPIYLYINSPG--------GSVTAGL 78
Query: 160 AIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
AIYD M ++K + T+CVG A A LL G KG R ALP S IMI Q
Sbjct: 79 AIYDTMRHIKSEVVTICVGLAASMGAFLLAGGTKGKRLALPHSRIMIHQ 127
>gi|115447465|ref|NP_001047512.1| Os02g0634500 [Oryza sativa Japonica Group]
gi|49388184|dbj|BAD25310.1| unknown protein [Oryza sativa Japonica Group]
gi|113537043|dbj|BAF09426.1| Os02g0634500 [Oryza sativa Japonica Group]
gi|215692767|dbj|BAG88235.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 298
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV + L++A+ L+L+ E+ KP++LYINS G G
Sbjct: 89 DIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPG--------GV 140
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y++ P+ TLC+G A +LLL AGA+G R ALP++ +MI Q
Sbjct: 141 VTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGARGERRALPNARVMIHQ 194
>gi|212696598|ref|ZP_03304726.1| hypothetical protein ANHYDRO_01138 [Anaerococcus hydrogenalis DSM
7454]
gi|325847156|ref|ZP_08169955.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|212676329|gb|EEB35936.1| hypothetical protein ANHYDRO_01138 [Anaerococcus hydrogenalis DSM
7454]
gi|325480936|gb|EGC83982.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 195
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++L V+++I+A+ L+L+ +D K I YINS G G
Sbjct: 23 DIYSRLLKDRIIFLTGPVEDGVSDIIIAQLLFLESQDPNKDIQFYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M Y+KP + T+C+G A A+LL +GAKG R +LP+S I+I Q
Sbjct: 75 VTAGLAIYDTMNYIKPDVSTICIGQAASMGAVLLSSGAKGKRFSLPNSNILIHQ 128
>gi|172035557|ref|YP_001802058.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. ATCC
51142]
gi|354554806|ref|ZP_08974109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
gi|171697011|gb|ACB49992.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353552960|gb|EHC22353.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
Length = 202
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + LI+A+ L+L+ ED +K IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPDKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
+ I+D M ++P + T+C+G A A LL AGAKG R +LP+S IMI Q
Sbjct: 69 VSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQ 122
>gi|350564171|ref|ZP_08932990.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalimicrobium aerophilum AL3]
gi|349778171|gb|EGZ32530.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalimicrobium aerophilum AL3]
Length = 201
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 9/137 (6%)
Query: 73 RSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
S ++ ++P T+ + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 3 HSNIMNALVPMVVEQTSRGERAFDIYSRLLKERVIFLVGPVEDHMANLIVAQMLFLESEN 62
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I+LYINS G G T AIYD M ++KP + T+C+G A + LL AG
Sbjct: 63 PEKDIHLYINSPG--------GSVTAGMAIYDTMRFIKPDVSTMCLGQAASMGSFLLAAG 114
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R ALP+S +MI Q
Sbjct: 115 AKGKRFALPNSRVMIHQ 131
>gi|164687878|ref|ZP_02211906.1| hypothetical protein CLOBAR_01523 [Clostridium bartlettii DSM
16795]
gi|164603153|gb|EDQ96618.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium bartlettii DSM 16795]
Length = 217
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
V+P+ T + D+ S L +RI++LG + +++A+ L+L+ ED +K IYL
Sbjct: 20 VVPYVVQQTGNGERSYDIFSRLLCDRIIFLGEEVTDASASVVIAQLLFLEAEDPDKDIYL 79
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T FAIYD M +VK + T+C+G A + LL GAKG R A
Sbjct: 80 YINSPG--------GSVTAGFAIYDTMQHVKCDVSTICIGLAASFGSFLLAGGAKGKRFA 131
Query: 199 LPSSTIMIKQ 208
LP+S IMI Q
Sbjct: 132 LPNSQIMIHQ 141
>gi|75906770|ref|YP_321066.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
gi|110816454|sp|Q3MFR5.1|CLPP1_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|75700495|gb|ABA20171.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
Length = 204
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG ++ LI+A+ L+L ED EK IYLYINS G G
Sbjct: 18 DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P + T+C G A A LL AG KG R +LP S IMI Q
Sbjct: 70 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQ 123
>gi|282896316|ref|ZP_06304338.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281198812|gb|EFA73691.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 194
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 68/123 (55%), Gaps = 9/123 (7%)
Query: 86 GTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT 145
G+ +EQ DL L++ RI++L + I+A LYL +D KPIYLYINS G
Sbjct: 14 GSNYEQWI-DLEDRLFRERIIFLTEEVDDGIANAIVAYLLYLDSDDQTKPIYLYINSPG- 71
Query: 146 TKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIM 205
G T AIYD + Y+K + T+CVG A + LL AGAKG R ALP S IM
Sbjct: 72 -------GSVTAGMAIYDTIQYIKSEVITICVGLAASMGSFLLAAGAKGKRLALPHSRIM 124
Query: 206 IKQ 208
I Q
Sbjct: 125 IHQ 127
>gi|213580888|ref|ZP_03362714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 175
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 121 AKGKRFCLPNSRVMIHQ 137
>gi|91793847|ref|YP_563498.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
denitrificans OS217]
gi|123356647|sp|Q12LA1.1|CLPP_SHEDO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|91715849|gb|ABE55775.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
denitrificans OS217]
Length = 203
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 8/137 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P S + +V TA + D+ S L K R+++L + LI+A+ L+L+ E
Sbjct: 5 PESVLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESES 64
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
+K IYLYINS G G T AIYD M ++KP + T+C+G A A LL G
Sbjct: 65 PDKDIYLYINSPG--------GSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGG 116
Query: 192 AKGNRAALPSSTIMIKQ 208
AKG R LP+S +MI Q
Sbjct: 117 AKGKRHCLPNSRVMIHQ 133
>gi|414079240|ref|YP_007000664.1| peptidase family S14 ClpP [Anabaena sp. 90]
gi|413972519|gb|AFW96607.1| peptidase family S14 ClpP [Anabaena sp. 90]
Length = 201
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG ++ LI+A+ L+L ED EK IY+YINS G G
Sbjct: 17 DIYSRLLRERIIFLGEQVDSNLANLIVAQLLFLDSEDAEKDIYMYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M +++P + T+C G A A LL AG KG R +LP S IMI Q
Sbjct: 69 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQ 122
>gi|387131588|ref|YP_006294478.1| ATP-dependent Clp protease proteolytic subunit [Methylophaga sp.
JAM7]
gi|386272877|gb|AFJ03791.1| ATP-dependent Clp protease proteolytic subunit [Methylophaga sp.
JAM7]
Length = 211
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L + LI+A+ L+L+ E+ +K I+LYINS G G
Sbjct: 32 DIYSRLLKERVIFLVGQVEDHMANLIVAQLLFLESENPDKDIHLYINSPG--------GA 83
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + TLC+G A ALLL AGA G R ALP+S +M+ Q
Sbjct: 84 VTAGLAIYDTMQFIKPDVSTLCIGQAASMGALLLTAGAAGKRFALPNSRMMVHQ 137
>gi|315917132|ref|ZP_07913372.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
gonidiaformans ATCC 25563]
gi|317058772|ref|ZP_07923257.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
3_1_5R]
gi|313684448|gb|EFS21283.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
3_1_5R]
gi|313691007|gb|EFS27842.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
gonidiaformans ATCC 25563]
Length = 195
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 68/120 (56%), Gaps = 9/120 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI++LG V ++A+ LYL+ ED K I LYINS G G
Sbjct: 18 DIFSRLLRDRIIFLGTEVNDQVAASLVAQLLYLEAEDPTKDIILYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ-AGDTG 213
+ AIYD M YVKP I T+C+G A A LL AG KG R AL +S IMI Q G TG
Sbjct: 70 VSAGLAIYDTMNYVKPDIQTVCIGQAASMGAFLLSAGTKGKRFALENSRIMIHQPLGGTG 129
>gi|16080507|ref|NP_391334.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. 168]
gi|221311403|ref|ZP_03593250.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. 168]
gi|221315730|ref|ZP_03597535.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221320645|ref|ZP_03601939.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221324930|ref|ZP_03606224.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. SMY]
gi|321313004|ref|YP_004205291.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BSn5]
gi|384177077|ref|YP_005558462.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|402777617|ref|YP_006631561.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
QB928]
gi|418031330|ref|ZP_12669815.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|428281042|ref|YP_005562777.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. natto BEST195]
gi|430758166|ref|YP_007208041.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. BSP1]
gi|449095907|ref|YP_007428398.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
XF-1]
gi|452912837|ref|ZP_21961465.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Bacillus
subtilis MB73/2]
gi|3287962|sp|P80244.3|CLPP_BACSU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Caseinolytic protease; AltName:
Full=Endopeptidase Clp; AltName: Full=Stress protein G7
gi|364506085|pdb|3TT7|A Chain A, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506086|pdb|3TT7|B Chain B, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506087|pdb|3TT7|C Chain C, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506088|pdb|3TT7|D Chain D, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506089|pdb|3TT7|E Chain E, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506090|pdb|3TT7|F Chain F, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506091|pdb|3TT7|G Chain G, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|1945673|emb|CAB08043.1| hypothetical protein [Bacillus subtilis]
gi|2635967|emb|CAB15459.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. 168]
gi|2668494|gb|AAC46381.1| ClpP [Bacillus subtilis]
gi|291485999|dbj|BAI87074.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. natto BEST195]
gi|320019278|gb|ADV94264.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BSn5]
gi|349596301|gb|AEP92488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|351472389|gb|EHA32502.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|402482796|gb|AFQ59305.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
QB928]
gi|407962289|dbj|BAM55529.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BEST7613]
gi|407966303|dbj|BAM59542.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BEST7003]
gi|430022686|gb|AGA23292.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. BSP1]
gi|449029822|gb|AGE65061.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
XF-1]
gi|452117865|gb|EME08259.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Bacillus
subtilis MB73/2]
Length = 197
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L ED EK I LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQ 124
>gi|343517775|ref|ZP_08754771.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
pittmaniae HK 85]
gi|343394626|gb|EGV07173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
pittmaniae HK 85]
Length = 195
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 73/133 (54%), Gaps = 11/133 (8%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
VI MV+ TS + D+ S L K R+++L + LI+A+ L+L+ ED +K
Sbjct: 3 VIPMVVEQTS---RGERSYDIYSRLLKERVIFLSGEVEDHMANLIVAQLLFLESEDPDKD 59
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I +YINS G G T AIYD M ++KP + TLC+G A A LL G G
Sbjct: 60 INIYINSPG--------GSVTAGMAIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGK 111
Query: 196 RAALPSSTIMIKQ 208
RAALP++ +MI Q
Sbjct: 112 RAALPNARVMIHQ 124
>gi|291463572|pdb|3KTI|A Chain A, Structure Of Clpp In Complex With Adep1
gi|291463573|pdb|3KTI|B Chain B, Structure Of Clpp In Complex With Adep1
gi|291463574|pdb|3KTI|C Chain C, Structure Of Clpp In Complex With Adep1
gi|291463575|pdb|3KTI|D Chain D, Structure Of Clpp In Complex With Adep1
gi|291463576|pdb|3KTI|E Chain E, Structure Of Clpp In Complex With Adep1
gi|291463577|pdb|3KTI|F Chain F, Structure Of Clpp In Complex With Adep1
gi|291463578|pdb|3KTI|G Chain G, Structure Of Clpp In Complex With Adep1
gi|291463586|pdb|3KTJ|A Chain A, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463587|pdb|3KTJ|B Chain B, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463588|pdb|3KTJ|C Chain C, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463589|pdb|3KTJ|D Chain D, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463590|pdb|3KTJ|E Chain E, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463591|pdb|3KTJ|F Chain F, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463592|pdb|3KTJ|G Chain G, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463593|pdb|3KTK|A Chain A, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463594|pdb|3KTK|B Chain B, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463595|pdb|3KTK|C Chain C, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463596|pdb|3KTK|D Chain D, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463597|pdb|3KTK|E Chain E, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463598|pdb|3KTK|F Chain F, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463599|pdb|3KTK|G Chain G, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463600|pdb|3KTK|H Chain H, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463601|pdb|3KTK|I Chain I, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463602|pdb|3KTK|J Chain J, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463603|pdb|3KTK|K Chain K, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463604|pdb|3KTK|L Chain L, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463605|pdb|3KTK|M Chain M, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463606|pdb|3KTK|N Chain N, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
Length = 199
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L ED EK I LYINS G G
Sbjct: 18 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 70 ITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQ 123
>gi|126700971|ref|YP_001089868.1| ATP-dependent Clp protease proteolytic subunit 2 [Clostridium
difficile 630]
gi|254976933|ref|ZP_05273405.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-66c26]
gi|255094319|ref|ZP_05323797.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CIP 107932]
gi|255102503|ref|ZP_05331480.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-63q42]
gi|255308399|ref|ZP_05352570.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile ATCC 43255]
gi|255316073|ref|ZP_05357656.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-76w55]
gi|255518732|ref|ZP_05386408.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-97b34]
gi|255651852|ref|ZP_05398754.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-37x79]
gi|260684879|ref|YP_003216164.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260688537|ref|YP_003219671.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|306521636|ref|ZP_07407983.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-32g58]
gi|384362546|ref|YP_006200398.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile BI1]
gi|423089882|ref|ZP_17078228.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
gi|115252408|emb|CAJ70250.1| ATP-dependent Clp protease proteolytic subunit 2 (Endopeptidase Clp
2) [Clostridium difficile 630]
gi|260211042|emb|CBA66381.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260214554|emb|CBE07092.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|357557468|gb|EHJ39008.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
Length = 194
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T + D+ S L K+RI+++G ++ L++A+ L+L+ ED + I +YINS G
Sbjct: 11 TGQGERSYDIYSKLLKDRIIFIGEEINDAIASLVVAQLLFLESEDPDSDIIIYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T FAIYD M YV+ + T+C+G A +A LL G G R ALP+S IMI
Sbjct: 69 ------GSATSGFAIYDTMNYVRCDVSTICIGMAASMSAFLLAGGTHGKRCALPNSEIMI 122
Query: 207 KQ 208
Q
Sbjct: 123 HQ 124
>gi|411118195|ref|ZP_11390576.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
gi|410711919|gb|EKQ69425.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
Length = 207
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + L++A+ L+L ED EK IYLYINS G G
Sbjct: 23 DIYSRLLRERIVFLGQQVDSDLANLVVAQLLFLDAEDPEKDIYLYINSPG--------GS 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T I+D M ++P + T+C+G A A LL AGAKG R +LP S IMI Q
Sbjct: 75 VTAGMGIFDTMKQIRPDVCTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 128
>gi|352096272|ref|ZP_08957152.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
gi|351676966|gb|EHA60117.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
Length = 200
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ + L RI++LG V ++A+ LYL ED KPIYLYINS G G
Sbjct: 22 DIYTRLGVERILFLGSDVNDGVANSLVAQMLYLDSEDSSKPIYLYINSPG--------GS 73
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M YVK + T+CVG A A LL AG KG R ALP S IMI Q
Sbjct: 74 VTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPHSRIMIHQ 127
>gi|152989915|ref|YP_001355637.1| ATP-dependent Clp protease proteolytic subunit [Nitratiruptor sp.
SB155-2]
gi|166201830|sp|A6Q1C1.1|CLPP_NITSB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|151421776|dbj|BAF69280.1| ATP-dependent Clp protease, proteolytic subunit [Nitratiruptor sp.
SB155-2]
Length = 196
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 71/129 (55%), Gaps = 9/129 (6%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ T + D+ S L K+RI+ L +V I+A+ L+L+ ED +K IYLY
Sbjct: 5 IPYVIERTGRGERSYDIYSRLLKDRIIMLSGEINDAVASSIVAQLLFLEAEDPDKDIYLY 64
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T +IYD M Y+KP + T+C+G A A LL +G KG R AL
Sbjct: 65 INSPG--------GVITSGMSIYDTMNYIKPDVSTICIGQAASMGAFLLSSGTKGKRYAL 116
Query: 200 PSSTIMIKQ 208
P + IMI Q
Sbjct: 117 PHARIMIHQ 125
>gi|392572059|gb|EIW65231.1| hypothetical protein TRAVEDRAFT_55853 [Trametes versicolor
FP-101664 SS1]
Length = 257
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 9/136 (6%)
Query: 74 SPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
PV ++P T + D+ S L + R++ L + + + L++A+ L+L+ E+
Sbjct: 48 HPVTANLVPIVIEQTGRGERSYDIFSRLLRERVIMLYGPIMDTDSALVVAQLLFLEAEET 107
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI++Y+NS G G T AIYD M YV PI T CVG A +LLL AG
Sbjct: 108 SKPIHVYVNSPG--------GSVTAGLAIYDTMQYVSSPIHTYCVGQACSMGSLLLVAGE 159
Query: 193 KGNRAALPSSTIMIKQ 208
KG R ALP+S+IMI Q
Sbjct: 160 KGKRHALPNSSIMIHQ 175
>gi|363890989|ref|ZP_09318283.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM5]
gi|363893165|ref|ZP_09320304.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM2]
gi|363895295|ref|ZP_09322293.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium ACC19a]
gi|402838212|ref|ZP_10886724.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacteriaceae bacterium OBRC8]
gi|361957733|gb|EHL11038.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium ACC19a]
gi|361961689|gb|EHL14872.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM2]
gi|361962756|gb|EHL15865.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM5]
gi|402273716|gb|EJU22911.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacteriaceae bacterium OBRC8]
Length = 200
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG L++A+ L+L+ ED +K I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGDEVNDQTASLVVAQLLFLESEDPDKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD + Y+KP + T+C+G A A LL G KG R ALP+S IMI Q
Sbjct: 71 ITAGMAIYDTIQYIKPDVSTICIGMAASMGAFLLNCGTKGKRFALPNSEIMIHQ 124
>gi|386760068|ref|YP_006233285.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. JS]
gi|384933351|gb|AFI30029.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. JS]
Length = 196
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L ED EK I LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI Q
Sbjct: 71 ITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQ 124
>gi|375090912|ref|ZP_09737219.1| ATP-dependent Clp protease proteolytic subunit [Helcococcus kunzii
ATCC 51366]
gi|374565048|gb|EHR36326.1| ATP-dependent Clp protease proteolytic subunit [Helcococcus kunzii
ATCC 51366]
Length = 196
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+++ + ++I+A+ L+L++ED +K I LYINS G G
Sbjct: 19 DIYSRLLKERIIFVSGEINDQMADIIVAQLLFLEFEDPDKDIQLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
T AI+D M Y+KP + T+C+G A A+LL +GAKG R +LP++ I+I Q
Sbjct: 71 VTAGLAIFDTMNYIKPDVSTICIGQAASMGAVLLTSGAKGKRYSLPNANILIHQ 124
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,193,968,904
Number of Sequences: 23463169
Number of extensions: 176608384
Number of successful extensions: 474529
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5193
Number of HSP's successfully gapped in prelim test: 271
Number of HSP's that attempted gapping in prelim test: 464025
Number of HSP's gapped (non-prelim): 5536
length of query: 258
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 119
effective length of database: 9,097,814,876
effective search space: 1082639970244
effective search space used: 1082639970244
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)