Query 025059
Match_columns 258
No_of_seqs 221 out of 2125
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 19:18:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025059.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025059hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vdw_A Vaccinia virus capping 100.0 6.3E-32 2.2E-36 233.6 17.4 228 2-249 12-255 (302)
2 3bgv_A MRNA CAP guanine-N7 met 100.0 1.7E-28 5.7E-33 212.9 22.9 224 9-249 4-241 (313)
3 1ri5_A MRNA capping enzyme; me 100.0 3.1E-27 1E-31 202.7 24.8 212 14-249 47-259 (298)
4 4gek_A TRNA (CMO5U34)-methyltr 99.8 1.9E-20 6.4E-25 158.4 15.0 114 22-145 61-177 (261)
5 2a14_A Indolethylamine N-methy 99.8 6.6E-20 2.3E-24 155.1 15.1 141 3-146 24-197 (263)
6 3sm3_A SAM-dependent methyltra 99.8 6.3E-19 2.1E-23 145.5 14.9 117 25-149 24-144 (235)
7 4htf_A S-adenosylmethionine-de 99.8 1.6E-18 5.6E-23 147.8 16.6 117 24-151 61-178 (285)
8 3bus_A REBM, methyltransferase 99.8 1.2E-17 4.2E-22 141.2 19.9 118 21-148 50-168 (273)
9 4hg2_A Methyltransferase type 99.8 1.5E-19 5.1E-24 152.5 8.0 103 26-147 34-136 (257)
10 3g2m_A PCZA361.24; SAM-depende 99.8 9E-19 3.1E-23 150.6 12.1 119 24-152 75-196 (299)
11 3hem_A Cyclopropane-fatty-acyl 99.8 4.1E-18 1.4E-22 146.6 15.9 173 29-245 70-248 (302)
12 1pjz_A Thiopurine S-methyltran 99.8 1.7E-18 6E-23 140.8 12.2 109 29-146 20-140 (203)
13 2p7i_A Hypothetical protein; p 99.8 7E-19 2.4E-23 146.3 9.9 107 31-154 42-149 (250)
14 1vl5_A Unknown conserved prote 99.8 1.3E-17 4.5E-22 140.2 17.5 107 29-147 35-141 (260)
15 3g5l_A Putative S-adenosylmeth 99.8 3.4E-18 1.1E-22 143.2 13.6 105 31-149 44-148 (253)
16 3l8d_A Methyltransferase; stru 99.8 1.5E-18 5.2E-23 144.1 11.3 110 25-149 47-156 (242)
17 3h2b_A SAM-dependent methyltra 99.8 1.4E-18 4.7E-23 140.8 10.6 143 32-242 42-184 (203)
18 3kkz_A Uncharacterized protein 99.8 1.3E-17 4.3E-22 141.0 17.0 108 30-148 45-152 (267)
19 1y8c_A S-adenosylmethionine-de 99.8 1.7E-17 5.8E-22 137.8 17.4 125 16-152 23-148 (246)
20 3f4k_A Putative methyltransfer 99.8 1.2E-17 4.1E-22 140.0 16.5 108 30-148 45-152 (257)
21 3thr_A Glycine N-methyltransfe 99.8 3.9E-17 1.3E-21 139.6 19.9 121 30-154 56-183 (293)
22 1kpg_A CFA synthase;, cyclopro 99.8 2.4E-17 8.3E-22 140.6 18.4 111 29-150 62-172 (287)
23 3dlc_A Putative S-adenosyl-L-m 99.8 2.9E-18 1E-22 139.8 12.0 119 21-149 33-151 (219)
24 2g72_A Phenylethanolamine N-me 99.8 3E-18 1E-22 146.6 12.5 128 17-145 54-214 (289)
25 3pfg_A N-methyltransferase; N, 99.8 8.2E-18 2.8E-22 141.8 14.8 107 25-146 44-151 (263)
26 1xtp_A LMAJ004091AAA; SGPP, st 99.8 5.4E-18 1.8E-22 141.8 13.5 107 30-147 92-198 (254)
27 3jwg_A HEN1, methyltransferase 99.8 3.3E-17 1.1E-21 134.3 17.6 110 30-148 28-142 (219)
28 2i62_A Nicotinamide N-methyltr 99.8 7.2E-18 2.5E-22 141.7 14.0 115 30-146 55-198 (265)
29 3dtn_A Putative methyltransfer 99.8 1.7E-17 5.8E-22 137.3 15.9 107 30-148 43-150 (234)
30 3ujc_A Phosphoethanolamine N-m 99.8 1.8E-18 6E-23 145.5 10.1 155 30-245 54-211 (266)
31 3dh0_A SAM dependent methyltra 99.8 1.1E-17 3.9E-22 136.8 14.4 109 29-148 35-145 (219)
32 3hnr_A Probable methyltransfer 99.8 1.2E-17 4.2E-22 136.7 14.5 105 30-149 44-148 (220)
33 2o57_A Putative sarcosine dime 99.8 2.6E-17 8.7E-22 141.1 16.5 110 29-148 80-189 (297)
34 3vc1_A Geranyl diphosphate 2-C 99.8 1.8E-17 6.2E-22 143.4 15.7 109 30-149 116-224 (312)
35 3d2l_A SAM-dependent methyltra 99.8 7.1E-17 2.4E-21 133.9 18.6 115 26-152 28-143 (243)
36 3lcc_A Putative methyl chlorid 99.7 1.4E-17 4.9E-22 137.9 13.2 107 31-147 66-172 (235)
37 1xxl_A YCGJ protein; structura 99.7 5.8E-17 2E-21 134.8 16.7 109 28-148 18-126 (239)
38 3dli_A Methyltransferase; PSI- 99.7 6.8E-18 2.3E-22 140.4 10.8 144 30-241 40-185 (240)
39 3bkw_A MLL3908 protein, S-aden 99.7 2.9E-17 9.9E-22 136.3 13.8 105 31-149 43-147 (243)
40 2pxx_A Uncharacterized protein 99.7 2.1E-17 7.1E-22 134.5 12.3 124 24-156 35-169 (215)
41 2fk8_A Methoxy mycolic acid sy 99.7 1E-16 3.5E-21 138.8 17.3 109 29-149 88-197 (318)
42 3ocj_A Putative exported prote 99.7 8.8E-17 3E-21 138.6 16.8 115 26-148 113-229 (305)
43 3e23_A Uncharacterized protein 99.7 2.9E-17 9.8E-22 133.9 12.7 103 29-148 41-143 (211)
44 2ex4_A Adrenal gland protein A 99.7 1.3E-17 4.3E-22 138.9 10.7 109 31-148 79-187 (241)
45 3ou2_A SAM-dependent methyltra 99.7 7.9E-17 2.7E-21 131.4 14.3 106 29-149 44-149 (218)
46 3jwh_A HEN1; methyltransferase 99.7 1.6E-16 5.4E-21 130.1 15.7 110 30-148 28-142 (217)
47 2kw5_A SLR1183 protein; struct 99.7 1.1E-16 3.8E-21 129.4 14.1 107 29-149 28-134 (202)
48 2gb4_A Thiopurine S-methyltran 99.7 3.1E-17 1.1E-21 137.9 10.9 107 30-145 67-190 (252)
49 3ofk_A Nodulation protein S; N 99.7 8.5E-17 2.9E-21 131.4 13.1 108 31-150 51-158 (216)
50 3bxo_A N,N-dimethyltransferase 99.7 2.5E-16 8.6E-21 130.3 16.1 110 25-149 34-144 (239)
51 3ccf_A Cyclopropane-fatty-acyl 99.7 1.7E-16 5.7E-21 135.0 15.1 102 30-149 56-157 (279)
52 3gu3_A Methyltransferase; alph 99.7 2.2E-16 7.6E-21 134.7 15.8 106 30-148 21-128 (284)
53 3mgg_A Methyltransferase; NYSG 99.7 6.7E-17 2.3E-21 137.0 12.4 108 30-148 36-144 (276)
54 1ve3_A Hypothetical protein PH 99.7 4.3E-16 1.5E-20 127.9 16.3 114 26-150 33-146 (227)
55 1nkv_A Hypothetical protein YJ 99.7 8E-17 2.7E-21 134.9 12.1 109 29-148 34-142 (256)
56 1wzn_A SAM-dependent methyltra 99.7 1.9E-16 6.5E-21 132.3 14.0 120 18-148 28-147 (252)
57 2yqz_A Hypothetical protein TT 99.7 4.1E-16 1.4E-20 130.8 16.1 107 29-148 37-143 (263)
58 3bkx_A SAM-dependent methyltra 99.7 1.1E-15 3.6E-20 129.4 18.4 110 29-148 41-161 (275)
59 1zx0_A Guanidinoacetate N-meth 99.7 4.4E-17 1.5E-21 135.3 9.5 113 26-146 55-170 (236)
60 3cc8_A Putative methyltransfer 99.7 9.1E-17 3.1E-21 131.9 11.0 110 24-152 25-136 (230)
61 2aot_A HMT, histamine N-methyl 99.7 3.9E-16 1.3E-20 133.7 15.3 114 30-149 51-175 (292)
62 2p8j_A S-adenosylmethionine-de 99.7 3.5E-16 1.2E-20 126.9 14.0 112 28-149 20-131 (209)
63 3g5t_A Trans-aconitate 3-methy 99.7 2.4E-16 8.3E-21 135.3 13.5 112 29-145 34-148 (299)
64 3mti_A RRNA methylase; SAM-dep 99.7 2.3E-16 8E-21 125.8 12.4 124 17-148 9-137 (185)
65 3p9n_A Possible methyltransfer 99.7 5.7E-16 1.9E-20 124.2 14.1 125 17-149 30-156 (189)
66 2gs9_A Hypothetical protein TT 99.7 1.8E-16 6E-21 129.1 11.1 114 23-155 28-141 (211)
67 4fsd_A Arsenic methyltransfera 99.7 1.2E-16 4.1E-21 142.2 10.9 110 29-148 81-205 (383)
68 1vlm_A SAM-dependent methyltra 99.7 3.2E-16 1.1E-20 128.6 12.3 147 25-240 42-188 (219)
69 3eey_A Putative rRNA methylase 99.7 5.2E-16 1.8E-20 125.0 13.2 121 23-148 14-141 (197)
70 3e8s_A Putative SAM dependent 99.7 5.6E-16 1.9E-20 126.9 12.8 105 30-149 51-155 (227)
71 3orh_A Guanidinoacetate N-meth 99.7 1.7E-16 5.8E-21 132.1 9.2 117 23-145 52-169 (236)
72 3cgg_A SAM-dependent methyltra 99.7 1.2E-15 4E-20 121.9 13.7 112 23-149 38-150 (195)
73 3i9f_A Putative type 11 methyl 99.6 3.5E-16 1.2E-20 123.0 8.7 100 29-148 15-114 (170)
74 4e2x_A TCAB9; kijanose, tetron 99.6 1.1E-16 3.7E-21 143.8 6.4 149 30-241 106-254 (416)
75 2xvm_A Tellurite resistance pr 99.6 1E-15 3.5E-20 123.0 11.4 105 31-146 32-136 (199)
76 2avn_A Ubiquinone/menaquinone 99.6 2.7E-15 9.3E-20 126.2 14.4 111 24-151 47-157 (260)
77 3m70_A Tellurite resistance pr 99.6 1E-15 3.4E-20 130.5 11.7 104 31-146 120-223 (286)
78 3iv6_A Putative Zn-dependent a 99.6 1.6E-15 5.5E-20 127.8 12.5 119 19-149 33-151 (261)
79 3g07_A 7SK snRNA methylphospha 99.6 7.1E-16 2.4E-20 132.3 10.0 117 31-148 46-222 (292)
80 3hm2_A Precorrin-6Y C5,15-meth 99.6 5.5E-15 1.9E-19 116.7 13.8 115 22-150 15-131 (178)
81 1dus_A MJ0882; hypothetical pr 99.6 1.3E-14 4.4E-19 115.7 15.7 111 30-151 51-162 (194)
82 3ggd_A SAM-dependent methyltra 99.6 1.1E-15 3.7E-20 127.3 9.4 113 29-149 54-166 (245)
83 3evz_A Methyltransferase; NYSG 99.6 1.1E-14 3.8E-19 120.0 15.2 118 25-150 49-183 (230)
84 2r3s_A Uncharacterized protein 99.6 4.3E-14 1.5E-18 123.0 19.4 109 30-148 164-273 (335)
85 3grz_A L11 mtase, ribosomal pr 99.6 3.6E-15 1.2E-19 120.9 11.6 107 26-148 55-161 (205)
86 3lpm_A Putative methyltransfer 99.6 7.5E-15 2.6E-19 123.6 13.8 124 22-149 37-179 (259)
87 3njr_A Precorrin-6Y methylase; 99.6 1.8E-14 6.1E-19 117.1 15.6 108 29-152 53-160 (204)
88 2fyt_A Protein arginine N-meth 99.6 6.3E-15 2.1E-19 129.1 13.5 107 29-143 62-168 (340)
89 3e05_A Precorrin-6Y C5,15-meth 99.6 2.5E-14 8.7E-19 115.8 16.2 108 29-150 38-146 (204)
90 3q7e_A Protein arginine N-meth 99.6 2.6E-15 8.8E-20 132.0 11.0 108 30-145 65-172 (349)
91 2p35_A Trans-aconitate 2-methy 99.6 2.1E-15 7.3E-20 126.2 9.7 103 30-149 32-135 (259)
92 3fpf_A Mtnas, putative unchara 99.6 1.6E-14 5.6E-19 123.1 15.0 106 28-149 119-225 (298)
93 3mcz_A O-methyltransferase; ad 99.6 6.4E-14 2.2E-18 122.9 19.3 107 32-146 180-287 (352)
94 3ege_A Putative methyltransfer 99.6 1.1E-15 3.9E-20 128.7 7.8 101 30-149 33-133 (261)
95 3i53_A O-methyltransferase; CO 99.6 2.5E-14 8.4E-19 124.6 16.1 106 31-147 169-275 (332)
96 1x19_A CRTF-related protein; m 99.6 3.2E-14 1.1E-18 125.3 16.8 113 23-146 181-295 (359)
97 3gwz_A MMCR; methyltransferase 99.6 1.4E-13 4.8E-18 121.7 20.9 105 30-145 201-306 (369)
98 2esr_A Methyltransferase; stru 99.6 2.2E-14 7.5E-19 113.5 13.8 110 30-149 30-141 (177)
99 1yzh_A TRNA (guanine-N(7)-)-me 99.6 2.3E-14 7.7E-19 117.1 14.2 116 29-149 39-159 (214)
100 2fhp_A Methylase, putative; al 99.6 1.8E-14 6.1E-19 114.6 13.1 113 30-149 43-157 (187)
101 3dxy_A TRNA (guanine-N(7)-)-me 99.6 4.6E-15 1.6E-19 122.0 9.6 115 30-150 33-154 (218)
102 3htx_A HEN1; HEN1, small RNA m 99.6 3.2E-14 1.1E-18 134.7 16.2 112 30-150 720-838 (950)
103 2ift_A Putative methylase HI07 99.6 4.1E-15 1.4E-19 120.6 8.9 110 31-149 53-166 (201)
104 1nt2_A Fibrillarin-like PRE-rR 99.6 1.2E-14 4E-19 118.8 11.4 107 29-147 55-162 (210)
105 2fca_A TRNA (guanine-N(7)-)-me 99.6 1.4E-14 4.8E-19 118.5 11.9 116 29-149 36-156 (213)
106 3fzg_A 16S rRNA methylase; met 99.6 2.3E-15 8E-20 119.8 6.9 105 28-145 46-151 (200)
107 3r0q_C Probable protein argini 99.6 7.2E-15 2.5E-19 130.4 10.8 107 30-145 62-168 (376)
108 1l3i_A Precorrin-6Y methyltran 99.6 3.2E-14 1.1E-18 113.2 13.6 109 29-151 31-139 (192)
109 3lbf_A Protein-L-isoaspartate 99.6 2.1E-14 7.3E-19 116.6 12.6 102 29-148 75-176 (210)
110 1qzz_A RDMB, aclacinomycin-10- 99.6 8.8E-14 3E-18 122.9 17.6 107 30-147 181-288 (374)
111 1g6q_1 HnRNP arginine N-methyl 99.6 1.6E-14 5.4E-19 125.9 12.5 107 29-143 36-142 (328)
112 3dmg_A Probable ribosomal RNA 99.6 7.9E-14 2.7E-18 123.7 16.7 112 31-151 233-345 (381)
113 1tw3_A COMT, carminomycin 4-O- 99.6 1.8E-13 6.2E-18 120.3 18.3 108 30-148 182-290 (360)
114 2qe6_A Uncharacterized protein 99.6 4.9E-14 1.7E-18 119.8 14.0 112 31-149 77-199 (274)
115 1ws6_A Methyltransferase; stru 99.6 1.6E-14 5.4E-19 113.2 10.2 111 29-150 39-151 (171)
116 1af7_A Chemotaxis receptor met 99.6 2.8E-14 9.4E-19 121.1 11.8 118 19-145 95-251 (274)
117 2yxd_A Probable cobalt-precorr 99.5 1.2E-13 4E-18 109.1 14.7 105 29-152 33-137 (183)
118 2y1w_A Histone-arginine methyl 99.5 2.6E-14 9E-19 125.5 11.9 107 30-146 49-155 (348)
119 3ckk_A TRNA (guanine-N(7)-)-me 99.5 3.8E-14 1.3E-18 117.8 12.2 118 29-150 44-172 (235)
120 4df3_A Fibrillarin-like rRNA/T 99.5 4.3E-14 1.5E-18 116.9 12.3 107 29-147 75-183 (233)
121 2frn_A Hypothetical protein PH 99.5 3E-14 1E-18 121.3 11.7 110 24-148 118-227 (278)
122 2ip2_A Probable phenazine-spec 99.5 3.2E-13 1.1E-17 117.6 18.3 103 33-146 169-272 (334)
123 1p91_A Ribosomal RNA large sub 99.5 5.2E-14 1.8E-18 118.7 12.8 101 30-153 84-185 (269)
124 2fpo_A Methylase YHHF; structu 99.5 3E-14 1E-18 115.6 10.5 108 31-149 54-163 (202)
125 1vbf_A 231AA long hypothetical 99.5 6.4E-14 2.2E-18 115.5 12.6 101 29-149 68-168 (231)
126 3dp7_A SAM-dependent methyltra 99.5 1.1E-13 3.7E-18 122.2 14.8 107 30-146 178-287 (363)
127 2nxc_A L11 mtase, ribosomal pr 99.5 2.6E-14 9E-19 120.1 10.2 105 26-147 115-219 (254)
128 3uwp_A Histone-lysine N-methyl 99.5 6.3E-14 2.1E-18 124.1 12.9 110 27-145 169-287 (438)
129 3m33_A Uncharacterized protein 99.5 1E-14 3.4E-19 120.3 6.7 97 24-143 41-139 (226)
130 1xdz_A Methyltransferase GIDB; 99.5 1.1E-13 3.6E-18 115.2 12.6 105 30-146 69-174 (240)
131 1jsx_A Glucose-inhibited divis 99.5 3E-13 1E-17 109.4 14.9 101 31-147 65-166 (207)
132 2pjd_A Ribosomal RNA small sub 99.5 7.8E-14 2.7E-18 122.2 11.2 111 30-150 195-307 (343)
133 1fbn_A MJ fibrillarin homologu 99.5 9.4E-14 3.2E-18 114.8 11.1 105 29-145 72-177 (230)
134 3ntv_A MW1564 protein; rossman 99.5 1E-13 3.5E-18 114.8 11.3 104 31-145 71-175 (232)
135 2ozv_A Hypothetical protein AT 99.5 7.4E-14 2.5E-18 117.7 10.6 128 20-149 23-173 (260)
136 2yxe_A Protein-L-isoaspartate 99.5 1.7E-13 5.7E-18 111.7 12.3 104 29-149 75-180 (215)
137 3p2e_A 16S rRNA methylase; met 99.5 4.1E-14 1.4E-18 116.8 8.7 120 21-146 14-139 (225)
138 4hc4_A Protein arginine N-meth 99.5 7.3E-14 2.5E-18 123.3 10.8 104 31-143 83-186 (376)
139 3u81_A Catechol O-methyltransf 99.5 3.2E-13 1.1E-17 110.8 14.0 110 31-147 58-171 (221)
140 2ipx_A RRNA 2'-O-methyltransfe 99.5 1.2E-13 4.2E-18 114.1 11.5 107 29-147 75-183 (233)
141 2b78_A Hypothetical protein SM 99.5 2.2E-13 7.4E-18 121.2 13.4 123 26-150 207-335 (385)
142 3tfw_A Putative O-methyltransf 99.5 5.2E-13 1.8E-17 111.7 14.4 107 31-147 63-171 (248)
143 4dcm_A Ribosomal RNA large sub 99.5 2.3E-13 8E-18 120.5 13.0 116 31-153 222-341 (375)
144 3lec_A NADB-rossmann superfami 99.5 3.2E-13 1.1E-17 111.3 12.8 115 24-150 14-129 (230)
145 3duw_A OMT, O-methyltransferas 99.5 2.9E-13 9.9E-18 111.0 12.5 107 31-146 58-167 (223)
146 3gdh_A Trimethylguanosine synt 99.5 5.5E-15 1.9E-19 122.8 2.0 103 31-145 78-180 (241)
147 3gnl_A Uncharacterized protein 99.5 4.7E-13 1.6E-17 111.2 13.1 123 23-157 13-137 (244)
148 3b3j_A Histone-arginine methyl 99.5 2.3E-13 8E-18 124.2 12.2 106 30-145 157-262 (480)
149 4dzr_A Protein-(glutamine-N5) 99.5 1.7E-14 6E-19 116.9 4.3 114 30-147 29-166 (215)
150 1i1n_A Protein-L-isoaspartate 99.5 2.4E-13 8.2E-18 111.7 11.1 105 29-149 75-185 (226)
151 3tma_A Methyltransferase; thum 99.5 4.1E-13 1.4E-17 118.1 13.2 117 29-152 201-323 (354)
152 3kr9_A SAM-dependent methyltra 99.5 5.9E-13 2E-17 109.5 13.2 121 24-156 8-130 (225)
153 2pbf_A Protein-L-isoaspartate 99.5 3.2E-13 1.1E-17 111.0 11.6 108 29-148 78-195 (227)
154 3tr6_A O-methyltransferase; ce 99.5 3.7E-13 1.3E-17 110.4 12.0 107 31-146 64-174 (225)
155 3lst_A CALO1 methyltransferase 99.5 1.4E-13 4.9E-18 120.7 10.0 110 24-147 176-287 (348)
156 2igt_A SAM dependent methyltra 99.5 4.4E-13 1.5E-17 116.9 12.8 127 18-149 142-275 (332)
157 3g89_A Ribosomal RNA small sub 99.5 2E-13 7E-18 114.3 10.2 105 31-147 80-185 (249)
158 3mb5_A SAM-dependent methyltra 99.5 5.4E-13 1.9E-17 111.5 12.8 108 29-152 91-200 (255)
159 1o9g_A RRNA methyltransferase; 99.5 2.6E-13 8.9E-18 113.4 10.8 114 31-145 51-213 (250)
160 2vdv_E TRNA (guanine-N(7)-)-me 99.5 4.7E-13 1.6E-17 111.7 12.2 115 30-149 48-176 (246)
161 3mq2_A 16S rRNA methyltransfer 99.5 3.6E-13 1.2E-17 110.0 11.2 112 28-147 24-141 (218)
162 3q87_B N6 adenine specific DNA 99.5 2.1E-13 7.1E-18 107.6 9.3 100 30-149 22-126 (170)
163 2b3t_A Protein methyltransfera 99.5 8.1E-13 2.8E-17 112.1 13.5 111 30-148 108-240 (276)
164 3id6_C Fibrillarin-like rRNA/T 99.5 5.9E-13 2E-17 110.2 12.3 107 29-147 74-182 (232)
165 3dr5_A Putative O-methyltransf 99.5 3.1E-13 1.1E-17 111.2 10.5 103 32-145 57-162 (221)
166 1u2z_A Histone-lysine N-methyl 99.5 8.2E-13 2.8E-17 118.6 14.0 110 29-145 240-358 (433)
167 1dl5_A Protein-L-isoaspartate 99.5 3.8E-13 1.3E-17 116.5 11.4 103 29-148 73-177 (317)
168 2gpy_A O-methyltransferase; st 99.5 5.4E-13 1.9E-17 110.2 11.7 106 31-146 54-160 (233)
169 1yb2_A Hypothetical protein TA 99.4 2.7E-13 9.2E-18 115.1 9.8 106 29-151 108-216 (275)
170 2pwy_A TRNA (adenine-N(1)-)-me 99.4 1E-12 3.5E-17 109.8 13.0 109 29-153 94-205 (258)
171 1g8a_A Fibrillarin-like PRE-rR 99.4 6.6E-13 2.3E-17 109.2 11.5 106 29-146 71-178 (227)
172 1i9g_A Hypothetical protein RV 99.4 7.8E-13 2.7E-17 112.1 12.3 111 29-154 97-211 (280)
173 2b25_A Hypothetical protein; s 99.4 1.1E-12 3.9E-17 114.4 13.6 115 28-155 102-228 (336)
174 1jg1_A PIMT;, protein-L-isoasp 99.4 6.5E-13 2.2E-17 110.0 11.1 104 29-149 89-192 (235)
175 2yvl_A TRMI protein, hypotheti 99.4 2.6E-12 8.8E-17 106.7 14.4 108 30-153 90-197 (248)
176 2plw_A Ribosomal RNA methyltra 99.4 5.8E-13 2E-17 107.3 10.1 109 29-149 20-157 (201)
177 3sso_A Methyltransferase; macr 99.4 5.2E-13 1.8E-17 117.9 10.4 107 24-145 209-323 (419)
178 3adn_A Spermidine synthase; am 99.4 2E-12 6.9E-17 110.8 13.9 111 29-146 81-198 (294)
179 1nv8_A HEMK protein; class I a 99.4 9E-13 3.1E-17 112.5 11.4 111 31-149 123-252 (284)
180 1ej0_A FTSJ; methyltransferase 99.4 7.9E-13 2.7E-17 103.5 10.0 110 29-150 20-140 (180)
181 3c3p_A Methyltransferase; NP_9 99.4 9.6E-13 3.3E-17 107.0 10.8 102 31-145 56-159 (210)
182 3r3h_A O-methyltransferase, SA 99.4 4E-13 1.4E-17 112.1 8.6 106 31-145 60-169 (242)
183 4a6d_A Hydroxyindole O-methylt 99.4 6.8E-12 2.3E-16 110.3 16.9 103 31-145 179-282 (353)
184 2as0_A Hypothetical protein PH 99.4 1.2E-12 3.9E-17 116.9 12.1 124 24-149 210-338 (396)
185 3hp7_A Hemolysin, putative; st 99.4 1.4E-13 4.7E-18 117.4 5.7 99 31-145 85-184 (291)
186 1r18_A Protein-L-isoaspartate( 99.4 8.1E-13 2.8E-17 108.8 9.8 104 29-148 82-196 (227)
187 3bzb_A Uncharacterized protein 99.4 1.7E-12 5.8E-17 110.5 12.0 112 30-146 78-205 (281)
188 2hnk_A SAM-dependent O-methylt 99.4 2.3E-12 7.8E-17 106.9 12.3 108 30-146 59-181 (239)
189 4dmg_A Putative uncharacterize 99.4 2.7E-12 9.2E-17 114.3 13.3 119 23-149 206-329 (393)
190 1sui_A Caffeoyl-COA O-methyltr 99.4 2.4E-12 8.2E-17 107.7 12.2 106 31-145 79-189 (247)
191 3bwc_A Spermidine synthase; SA 99.4 1E-12 3.4E-17 113.3 9.7 113 30-149 94-213 (304)
192 4azs_A Methyltransferase WBDD; 99.4 8E-13 2.7E-17 123.2 9.7 129 9-146 43-173 (569)
193 1o54_A SAM-dependent O-methylt 99.4 3.5E-12 1.2E-16 108.2 12.5 108 29-152 110-219 (277)
194 3giw_A Protein of unknown func 99.4 3.5E-12 1.2E-16 107.6 12.3 112 33-148 80-202 (277)
195 3dou_A Ribosomal RNA large sub 99.4 2.9E-12 1E-16 103.0 11.3 110 29-151 23-144 (191)
196 3tm4_A TRNA (guanine N2-)-meth 99.4 3.4E-12 1.2E-16 113.0 12.7 125 24-156 210-339 (373)
197 3a27_A TYW2, uncharacterized p 99.4 1.9E-12 6.5E-17 109.8 10.6 106 28-149 116-222 (272)
198 1ixk_A Methyltransferase; open 99.4 1.6E-12 5.4E-17 112.6 10.3 113 29-148 116-248 (315)
199 3cbg_A O-methyltransferase; cy 99.4 2.6E-12 9E-17 106.3 10.9 106 31-145 72-181 (232)
200 3c0k_A UPF0064 protein YCCW; P 99.4 4.9E-12 1.7E-16 112.9 13.2 118 30-149 219-342 (396)
201 1ne2_A Hypothetical protein TA 99.4 7.8E-12 2.7E-16 100.7 13.2 102 29-149 49-150 (200)
202 3c3y_A Pfomt, O-methyltransfer 99.4 6.3E-12 2.2E-16 104.4 12.8 107 31-146 70-181 (237)
203 3ajd_A Putative methyltransfer 99.4 9E-13 3.1E-17 111.9 7.3 116 30-148 82-213 (274)
204 2avd_A Catechol-O-methyltransf 99.4 3.6E-12 1.2E-16 104.8 10.5 107 30-145 68-178 (229)
205 1mjf_A Spermidine synthase; sp 99.4 7.6E-12 2.6E-16 106.6 12.7 110 29-147 73-194 (281)
206 2bm8_A Cephalosporin hydroxyla 99.3 1.6E-12 5.6E-17 107.9 8.2 101 31-146 81-187 (236)
207 3k6r_A Putative transferase PH 99.3 1.8E-12 6.3E-17 109.9 8.4 106 25-145 119-224 (278)
208 2zfu_A Nucleomethylin, cerebra 99.3 8.8E-13 3E-17 107.4 6.0 89 30-149 66-154 (215)
209 3p9c_A Caffeic acid O-methyltr 99.3 5.4E-12 1.9E-16 111.3 11.3 97 30-145 200-297 (364)
210 3v97_A Ribosomal RNA large sub 99.3 9E-12 3.1E-16 118.6 13.3 113 31-148 539-659 (703)
211 1wy7_A Hypothetical protein PH 99.3 1.9E-11 6.5E-16 98.8 13.5 104 30-148 48-151 (207)
212 3reo_A (ISO)eugenol O-methyltr 99.3 4.7E-12 1.6E-16 111.9 10.6 98 30-146 202-300 (368)
213 2nyu_A Putative ribosomal RNA 99.3 4.8E-12 1.6E-16 101.3 9.6 110 29-150 20-149 (196)
214 1uir_A Polyamine aminopropyltr 99.3 6.6E-12 2.2E-16 108.7 11.0 113 29-146 75-195 (314)
215 2o07_A Spermidine synthase; st 99.3 7E-12 2.4E-16 108.0 11.1 114 30-148 94-211 (304)
216 2pt6_A Spermidine synthase; tr 99.3 7.6E-12 2.6E-16 108.6 11.2 113 29-148 114-232 (321)
217 1fp1_D Isoliquiritigenin 2'-O- 99.3 5E-12 1.7E-16 111.8 10.2 104 23-145 199-305 (372)
218 1inl_A Spermidine synthase; be 99.3 1.1E-11 3.6E-16 106.5 11.7 113 30-148 89-207 (296)
219 2wa2_A Non-structural protein 99.3 4.5E-13 1.5E-17 113.9 2.9 108 28-148 79-195 (276)
220 2h00_A Methyltransferase 10 do 99.3 3.2E-12 1.1E-16 106.9 7.8 114 31-145 65-191 (254)
221 2oxt_A Nucleoside-2'-O-methylt 99.3 6.2E-13 2.1E-17 112.4 3.4 109 27-148 70-187 (265)
222 2b2c_A Spermidine synthase; be 99.3 9.8E-12 3.3E-16 107.5 11.0 111 29-146 106-222 (314)
223 2qm3_A Predicted methyltransfe 99.3 2.4E-11 8.3E-16 107.5 13.7 106 31-148 172-280 (373)
224 2i7c_A Spermidine synthase; tr 99.3 9.5E-12 3.2E-16 106.1 10.6 112 30-148 77-194 (283)
225 1iy9_A Spermidine synthase; ro 99.3 5.7E-12 2E-16 107.0 9.1 114 30-148 74-191 (275)
226 1zq9_A Probable dimethyladenos 99.3 1.6E-11 5.4E-16 104.8 11.8 103 29-143 26-144 (285)
227 2p41_A Type II methyltransfera 99.3 3.9E-12 1.3E-16 109.6 7.8 108 28-149 79-194 (305)
228 1wxx_A TT1595, hypothetical pr 99.3 5.9E-12 2E-16 111.8 9.1 115 31-149 209-328 (382)
229 1xj5_A Spermidine synthase 1; 99.3 4.9E-12 1.7E-16 110.3 8.5 112 30-146 119-235 (334)
230 3opn_A Putative hemolysin; str 99.3 3E-12 1E-16 106.1 6.6 100 31-146 37-137 (232)
231 3gjy_A Spermidine synthase; AP 99.3 1.3E-11 4.3E-16 106.5 9.9 112 33-149 91-203 (317)
232 1fp2_A Isoflavone O-methyltran 99.3 7.9E-12 2.7E-16 109.7 8.4 99 29-146 186-288 (352)
233 3lcv_B Sisomicin-gentamicin re 99.3 7.7E-12 2.6E-16 104.1 7.7 104 30-145 131-235 (281)
234 3frh_A 16S rRNA methylase; met 99.3 2.3E-11 7.7E-16 100.3 10.4 103 30-147 104-206 (253)
235 2ld4_A Anamorsin; methyltransf 99.3 9.6E-13 3.3E-17 104.0 1.5 94 28-147 9-102 (176)
236 2yxl_A PH0851 protein, 450AA l 99.2 9E-11 3.1E-15 106.4 14.3 115 29-148 257-391 (450)
237 1sqg_A SUN protein, FMU protei 99.2 7.1E-11 2.4E-15 106.4 13.0 113 30-148 245-376 (429)
238 2f8l_A Hypothetical protein LM 99.2 1.4E-11 4.9E-16 107.8 8.1 109 31-149 130-259 (344)
239 2yx1_A Hypothetical protein MJ 99.2 3.3E-11 1.1E-15 105.2 10.2 105 26-149 190-294 (336)
240 3m6w_A RRNA methylase; rRNA me 99.2 1.6E-11 5.5E-16 111.2 8.1 112 30-148 100-231 (464)
241 2frx_A Hypothetical protein YE 99.2 1.1E-10 3.6E-15 106.5 12.1 112 31-148 117-248 (479)
242 2h1r_A Dimethyladenosine trans 99.2 1.4E-10 4.9E-15 99.6 12.2 79 29-117 40-118 (299)
243 3m4x_A NOL1/NOP2/SUN family pr 99.2 8.5E-11 2.9E-15 106.2 10.5 113 30-148 104-236 (456)
244 1zg3_A Isoflavanone 4'-O-methy 99.2 7.9E-11 2.7E-15 103.5 8.9 97 30-145 192-292 (358)
245 3gru_A Dimethyladenosine trans 99.1 6.9E-10 2.4E-14 94.9 14.1 78 29-116 48-125 (295)
246 3ldu_A Putative methylase; str 99.1 1.7E-10 5.7E-15 102.5 10.2 125 20-151 183-349 (385)
247 3ldg_A Putative uncharacterize 99.1 5.2E-10 1.8E-14 99.2 13.2 117 28-151 191-348 (384)
248 2cmg_A Spermidine synthase; tr 99.1 8E-11 2.7E-15 99.2 7.5 100 30-148 71-173 (262)
249 2qfm_A Spermine synthase; sper 99.1 5.8E-10 2E-14 97.3 12.8 126 31-158 188-328 (364)
250 2jjq_A Uncharacterized RNA met 99.1 4.3E-10 1.5E-14 101.0 12.3 106 29-153 288-393 (425)
251 3k0b_A Predicted N6-adenine-sp 99.1 2.6E-10 8.8E-15 101.5 10.7 123 22-151 191-355 (393)
252 1uwv_A 23S rRNA (uracil-5-)-me 99.1 1.2E-09 3.9E-14 98.6 14.7 111 29-152 284-394 (433)
253 2okc_A Type I restriction enzy 99.1 1.8E-10 6.2E-15 104.2 8.6 112 31-149 171-310 (445)
254 2ih2_A Modification methylase 99.1 2.6E-10 9E-15 102.0 8.6 102 31-149 39-167 (421)
255 3fut_A Dimethyladenosine trans 99.0 1.9E-09 6.4E-14 91.1 11.7 111 18-145 34-144 (271)
256 1yub_A Ermam, rRNA methyltrans 99.0 4.1E-11 1.4E-15 99.9 0.6 103 29-145 27-144 (245)
257 3tqs_A Ribosomal RNA small sub 99.0 2.5E-09 8.7E-14 89.6 11.5 75 29-109 27-101 (255)
258 2dul_A N(2),N(2)-dimethylguano 99.0 3.1E-09 1E-13 94.1 12.0 105 31-149 47-167 (378)
259 3axs_A Probable N(2),N(2)-dime 99.0 3.7E-09 1.3E-13 93.8 12.1 107 30-149 51-161 (392)
260 3bt7_A TRNA (uracil-5-)-methyl 99.0 5E-09 1.7E-13 92.4 13.0 112 31-156 213-336 (369)
261 2xyq_A Putative 2'-O-methyl tr 99.0 7.7E-10 2.7E-14 94.3 7.1 98 29-149 61-174 (290)
262 1qam_A ERMC' methyltransferase 99.0 5.6E-09 1.9E-13 86.9 11.4 62 30-95 29-90 (244)
263 2b9e_A NOL1/NOP2/SUN domain fa 99.0 6.5E-09 2.2E-13 89.5 12.2 114 30-148 101-236 (309)
264 2ar0_A M.ecoki, type I restric 98.9 3.5E-09 1.2E-13 97.9 9.2 114 31-149 169-315 (541)
265 3evf_A RNA-directed RNA polyme 98.8 2.1E-08 7E-13 83.9 10.7 115 28-152 71-192 (277)
266 3uzu_A Ribosomal RNA small sub 98.8 4.9E-08 1.7E-12 82.8 13.1 74 18-96 29-105 (279)
267 3khk_A Type I restriction-modi 98.8 7.4E-09 2.5E-13 95.7 8.4 116 29-149 242-398 (544)
268 3v97_A Ribosomal RNA large sub 98.8 2.1E-08 7.3E-13 95.4 11.7 125 22-150 180-351 (703)
269 2r6z_A UPF0341 protein in RSP 98.8 4.2E-09 1.4E-13 88.4 5.8 83 31-116 83-172 (258)
270 3lkd_A Type I restriction-modi 98.8 6.6E-08 2.3E-12 89.3 13.2 116 31-149 221-361 (542)
271 1m6y_A S-adenosyl-methyltransf 98.8 1.7E-08 5.7E-13 86.6 8.1 81 29-113 24-106 (301)
272 3ftd_A Dimethyladenosine trans 98.8 3.1E-08 1.1E-12 82.7 9.4 62 29-95 29-90 (249)
273 4gqb_A Protein arginine N-meth 98.8 1.8E-08 6.3E-13 94.0 8.7 102 32-143 358-464 (637)
274 3b5i_A S-adenosyl-L-methionine 98.7 2.9E-07 9.8E-12 81.0 15.1 114 32-148 53-227 (374)
275 1qyr_A KSGA, high level kasuga 98.7 7.9E-08 2.7E-12 80.3 11.0 78 29-113 19-98 (252)
276 3gcz_A Polyprotein; flavivirus 98.7 3.3E-08 1.1E-12 82.8 7.8 115 28-152 87-209 (282)
277 3cvo_A Methyltransferase-like 98.7 3.2E-07 1.1E-11 73.9 12.5 104 31-145 30-153 (202)
278 3ll7_A Putative methyltransfer 98.7 2.2E-08 7.4E-13 89.2 6.0 78 30-113 92-171 (410)
279 3s1s_A Restriction endonucleas 98.6 2.9E-07 1E-11 87.4 13.2 116 30-150 320-469 (878)
280 2efj_A 3,7-dimethylxanthine me 98.6 4.4E-07 1.5E-11 80.0 12.4 112 32-149 53-228 (384)
281 3c6k_A Spermine synthase; sper 98.6 4.5E-07 1.5E-11 79.5 12.3 128 30-159 204-346 (381)
282 3ua3_A Protein arginine N-meth 98.6 1.1E-07 3.8E-12 89.0 8.3 108 32-143 410-531 (745)
283 3o4f_A Spermidine synthase; am 98.5 2.5E-07 8.5E-12 78.6 8.9 114 29-147 81-199 (294)
284 1m6e_X S-adenosyl-L-methionnin 98.5 3E-07 1E-11 80.4 9.1 110 32-147 52-210 (359)
285 3eld_A Methyltransferase; flav 98.4 6.4E-07 2.2E-11 75.5 8.5 117 27-153 77-200 (300)
286 2k4m_A TR8_protein, UPF0146 pr 98.3 5.2E-07 1.8E-11 68.2 5.1 88 27-145 31-120 (153)
287 4fzv_A Putative methyltransfer 98.3 3.8E-06 1.3E-10 73.5 10.3 115 29-148 146-286 (359)
288 1wg8_A Predicted S-adenosylmet 98.3 3.9E-06 1.3E-10 70.6 9.3 76 29-112 20-96 (285)
289 3ufb_A Type I restriction-modi 98.2 5E-06 1.7E-10 76.6 10.6 116 31-149 217-365 (530)
290 2px2_A Genome polyprotein [con 98.2 9.5E-07 3.2E-11 72.9 4.3 110 28-149 70-186 (269)
291 2oyr_A UPF0341 protein YHIQ; a 98.2 1.9E-06 6.5E-11 72.1 6.1 81 30-116 85-175 (258)
292 4auk_A Ribosomal RNA large sub 98.2 1.9E-05 6.5E-10 68.9 12.3 97 27-143 207-303 (375)
293 2wk1_A NOVP; transferase, O-me 98.2 5.4E-05 1.8E-09 64.0 14.2 106 31-147 106-245 (282)
294 2qy6_A UPF0209 protein YFCK; s 98.1 1.6E-05 5.6E-10 66.4 10.5 121 31-157 60-223 (257)
295 2zig_A TTHA0409, putative modi 98.1 1.5E-05 5E-10 68.0 8.9 55 22-77 226-280 (297)
296 3lkz_A Non-structural protein 97.9 8.7E-05 3E-09 62.4 10.7 117 28-156 91-216 (321)
297 3p8z_A Mtase, non-structural p 97.8 2.5E-05 8.5E-10 63.6 5.5 116 28-156 75-198 (267)
298 2vz8_A Fatty acid synthase; tr 97.6 2.9E-05 1E-09 83.0 4.6 104 30-147 1239-1349(2512)
299 3tka_A Ribosomal RNA small sub 97.6 0.00013 4.5E-09 62.8 7.1 78 29-113 55-136 (347)
300 1g60_A Adenine-specific methyl 97.5 0.00022 7.4E-09 59.5 7.7 55 22-77 203-257 (260)
301 1rjd_A PPM1P, carboxy methyl t 97.5 0.002 7E-08 55.7 13.6 130 11-144 71-230 (334)
302 2uyo_A Hypothetical protein ML 97.5 0.018 6.2E-07 49.1 19.2 174 33-250 104-288 (310)
303 3r24_A NSP16, 2'-O-methyl tran 97.1 0.00051 1.7E-08 57.8 5.1 99 31-150 109-221 (344)
304 1i4w_A Mitochondrial replicati 96.7 0.0048 1.7E-07 53.6 8.2 58 32-93 59-117 (353)
305 3g7u_A Cytosine-specific methy 96.6 0.0036 1.2E-07 55.0 6.5 76 33-114 3-80 (376)
306 1g55_A DNA cytosine methyltran 96.4 0.0019 6.6E-08 56.0 3.6 74 32-114 2-77 (343)
307 2c7p_A Modification methylase 96.3 0.0088 3E-07 51.5 6.9 69 32-113 11-79 (327)
308 1boo_A Protein (N-4 cytosine-s 96.2 0.0088 3E-07 51.3 6.5 55 22-77 243-297 (323)
309 1eg2_A Modification methylase 96.0 0.012 4.2E-07 50.4 6.7 55 22-77 233-290 (319)
310 1f8f_A Benzyl alcohol dehydrog 95.9 0.032 1.1E-06 48.5 8.8 98 29-145 188-288 (371)
311 3iei_A Leucine carboxyl methyl 95.8 0.81 2.8E-05 39.3 19.8 190 9-245 61-286 (334)
312 2oo3_A Protein involved in cat 95.8 0.0029 9.9E-08 53.1 1.6 107 32-148 92-200 (283)
313 3ubt_Y Modification methylase 95.8 0.023 7.9E-07 48.6 7.3 100 33-145 1-109 (331)
314 2qrv_A DNA (cytosine-5)-methyl 95.7 0.026 8.9E-07 47.8 7.3 75 31-113 15-91 (295)
315 3tos_A CALS11; methyltransfera 95.6 0.13 4.5E-06 42.5 11.0 117 24-147 62-218 (257)
316 3qv2_A 5-cytosine DNA methyltr 95.5 0.025 8.4E-07 48.7 6.4 76 31-116 9-87 (327)
317 4h0n_A DNMT2; SAH binding, tra 95.3 0.017 5.7E-07 49.9 4.9 72 33-113 4-77 (333)
318 3s2e_A Zinc-containing alcohol 95.2 0.051 1.7E-06 46.6 7.6 99 28-145 163-262 (340)
319 3fwz_A Inner membrane protein 95.2 0.17 6E-06 37.3 9.6 100 33-150 8-109 (140)
320 2dph_A Formaldehyde dismutase; 94.6 0.062 2.1E-06 47.2 6.5 106 29-145 183-298 (398)
321 3m6i_A L-arabinitol 4-dehydrog 94.4 0.21 7.1E-06 43.1 9.5 103 28-145 176-282 (363)
322 2py6_A Methyltransferase FKBM; 94.1 0.13 4.4E-06 45.5 7.5 61 30-90 225-291 (409)
323 1pqw_A Polyketide synthase; ro 94.1 0.065 2.2E-06 42.0 5.0 96 29-145 36-136 (198)
324 1pl8_A Human sorbitol dehydrog 93.8 0.19 6.5E-06 43.3 7.9 101 28-145 168-272 (356)
325 1v3u_A Leukotriene B4 12- hydr 93.7 0.19 6.5E-06 42.8 7.7 97 29-145 143-243 (333)
326 1rjw_A ADH-HT, alcohol dehydro 93.7 0.26 8.9E-06 42.1 8.7 99 28-145 161-260 (339)
327 3fpc_A NADP-dependent alcohol 93.7 0.19 6.4E-06 43.2 7.7 98 29-145 164-265 (352)
328 3uog_A Alcohol dehydrogenase; 93.6 0.21 7.2E-06 43.1 7.8 97 29-145 187-286 (363)
329 1e3j_A NADP(H)-dependent ketos 93.5 0.16 5.5E-06 43.6 7.0 100 28-145 165-270 (352)
330 3two_A Mannitol dehydrogenase; 93.5 0.18 6.3E-06 43.2 7.3 91 28-145 173-264 (348)
331 1uuf_A YAHK, zinc-type alcohol 93.5 0.25 8.4E-06 42.9 8.1 96 28-145 191-287 (369)
332 4ej6_A Putative zinc-binding d 93.5 0.39 1.3E-05 41.6 9.4 99 28-145 179-283 (370)
333 1kol_A Formaldehyde dehydrogen 93.4 0.2 6.9E-06 43.8 7.5 107 29-145 183-299 (398)
334 4b7c_A Probable oxidoreductase 93.1 0.23 7.8E-06 42.3 7.2 98 29-145 147-247 (336)
335 2b5w_A Glucose dehydrogenase; 92.9 0.36 1.2E-05 41.5 8.3 96 29-145 164-272 (357)
336 1p0f_A NADP-dependent alcohol 92.9 0.56 1.9E-05 40.5 9.5 100 29-145 189-292 (373)
337 3ip1_A Alcohol dehydrogenase, 92.9 0.72 2.5E-05 40.4 10.3 102 29-145 211-317 (404)
338 2fzw_A Alcohol dehydrogenase c 92.9 0.58 2E-05 40.4 9.6 100 29-145 188-291 (373)
339 3llv_A Exopolyphosphatase-rela 92.8 0.99 3.4E-05 32.9 9.6 100 32-150 6-107 (141)
340 3me5_A Cytosine-specific methy 92.6 0.088 3E-06 47.6 4.0 81 32-115 88-179 (482)
341 3l9w_A Glutathione-regulated p 92.6 0.56 1.9E-05 41.5 9.1 102 32-150 4-106 (413)
342 2eih_A Alcohol dehydrogenase; 92.6 0.37 1.3E-05 41.2 7.8 97 29-145 164-264 (343)
343 3uko_A Alcohol dehydrogenase c 92.5 0.35 1.2E-05 42.0 7.7 100 29-145 191-294 (378)
344 1cdo_A Alcohol dehydrogenase; 92.5 0.56 1.9E-05 40.5 8.9 98 29-145 190-293 (374)
345 2hcy_A Alcohol dehydrogenase 1 92.4 0.34 1.1E-05 41.5 7.4 98 29-145 167-268 (347)
346 3gms_A Putative NADPH:quinone 92.2 0.32 1.1E-05 41.5 7.0 96 29-145 142-242 (340)
347 2d8a_A PH0655, probable L-thre 92.1 0.45 1.6E-05 40.7 7.8 96 31-145 167-266 (348)
348 2j3h_A NADP-dependent oxidored 92.0 0.47 1.6E-05 40.4 7.8 98 29-145 153-254 (345)
349 1e3i_A Alcohol dehydrogenase, 91.8 0.9 3.1E-05 39.2 9.4 100 29-145 193-296 (376)
350 4dvj_A Putative zinc-dependent 91.7 0.82 2.8E-05 39.4 9.0 95 31-145 171-269 (363)
351 2jhf_A Alcohol dehydrogenase E 91.6 0.77 2.6E-05 39.6 8.8 100 29-145 189-292 (374)
352 2cdc_A Glucose dehydrogenase g 91.5 0.39 1.3E-05 41.4 6.8 91 32-145 181-277 (366)
353 1yb5_A Quinone oxidoreductase; 91.5 0.44 1.5E-05 41.0 7.0 97 29-145 168-268 (351)
354 3vyw_A MNMC2; tRNA wobble urid 91.4 0.38 1.3E-05 40.8 6.3 120 31-158 96-237 (308)
355 3jv7_A ADH-A; dehydrogenase, n 91.3 0.38 1.3E-05 41.1 6.5 98 28-145 168-269 (345)
356 1jvb_A NAD(H)-dependent alcoho 91.1 0.45 1.6E-05 40.7 6.7 99 28-145 167-270 (347)
357 3pxx_A Carveol dehydrogenase; 90.9 4.1 0.00014 33.3 12.3 112 31-145 9-152 (287)
358 4eso_A Putative oxidoreductase 90.8 3.3 0.00011 33.5 11.5 109 31-145 7-137 (255)
359 1zkd_A DUF185; NESG, RPR58, st 90.7 0.47 1.6E-05 41.6 6.4 59 18-76 67-133 (387)
360 3goh_A Alcohol dehydrogenase, 90.5 0.37 1.3E-05 40.6 5.5 87 29-145 140-228 (315)
361 2h6e_A ADH-4, D-arabinose 1-de 90.3 0.076 2.6E-06 45.6 1.0 95 31-145 170-268 (344)
362 1vj0_A Alcohol dehydrogenase, 90.3 0.58 2E-05 40.6 6.7 100 29-145 193-297 (380)
363 3fbg_A Putative arginate lyase 90.2 1.4 4.8E-05 37.6 9.0 95 31-145 150-247 (346)
364 3oig_A Enoyl-[acyl-carrier-pro 90.1 6.4 0.00022 31.7 13.7 113 31-145 6-146 (266)
365 3o26_A Salutaridine reductase; 90.1 2.1 7.2E-05 35.3 9.9 84 31-116 11-102 (311)
366 3iht_A S-adenosyl-L-methionine 89.8 2.1 7.1E-05 32.4 8.3 106 31-145 40-146 (174)
367 1piw_A Hypothetical zinc-type 89.7 0.33 1.1E-05 41.8 4.6 97 28-145 176-275 (360)
368 4eye_A Probable oxidoreductase 89.7 1.3 4.5E-05 37.7 8.4 96 29-145 157-256 (342)
369 2dq4_A L-threonine 3-dehydroge 89.7 0.47 1.6E-05 40.5 5.6 95 31-145 164-261 (343)
370 3c85_A Putative glutathione-re 89.6 1.9 6.4E-05 32.9 8.6 101 32-149 39-142 (183)
371 1wly_A CAAR, 2-haloacrylate re 89.4 1.7 5.9E-05 36.7 8.9 97 29-145 143-243 (333)
372 4a2c_A Galactitol-1-phosphate 89.4 2.5 8.5E-05 35.8 9.9 98 29-145 158-259 (346)
373 3jyn_A Quinone oxidoreductase; 89.4 0.88 3E-05 38.4 7.0 96 29-145 138-238 (325)
374 3v2g_A 3-oxoacyl-[acyl-carrier 89.3 4.1 0.00014 33.3 10.9 112 31-145 30-164 (271)
375 2j8z_A Quinone oxidoreductase; 89.3 1.1 3.9E-05 38.3 7.8 97 29-145 160-260 (354)
376 3grk_A Enoyl-(acyl-carrier-pro 89.2 4.1 0.00014 33.7 11.0 111 31-145 30-168 (293)
377 2zb4_A Prostaglandin reductase 89.2 0.8 2.7E-05 39.2 6.7 98 29-145 156-259 (357)
378 1qor_A Quinone oxidoreductase; 89.1 0.75 2.6E-05 38.9 6.4 96 29-145 138-238 (327)
379 2zig_A TTHA0409, putative modi 88.9 0.34 1.2E-05 40.7 4.0 63 82-148 21-99 (297)
380 3ijr_A Oxidoreductase, short c 88.8 8.6 0.00029 31.7 12.7 112 31-145 46-181 (291)
381 2c0c_A Zinc binding alcohol de 88.6 1.1 3.8E-05 38.5 7.2 97 29-145 161-260 (362)
382 3rkr_A Short chain oxidoreduct 88.4 7.5 0.00025 31.3 11.8 81 31-115 28-116 (262)
383 4f3n_A Uncharacterized ACR, CO 87.8 1.4 4.8E-05 39.1 7.4 56 18-76 127-188 (432)
384 4dup_A Quinone oxidoreductase; 87.8 1.7 5.8E-05 37.2 7.8 97 29-145 165-264 (353)
385 3ioy_A Short-chain dehydrogena 87.6 8.5 0.00029 32.2 12.1 84 31-115 7-97 (319)
386 1id1_A Putative potassium chan 87.6 3.9 0.00013 30.1 8.9 101 32-149 3-108 (153)
387 3o38_A Short chain dehydrogena 87.4 6 0.00021 31.9 10.7 83 31-115 21-111 (266)
388 1lss_A TRK system potassium up 87.4 4.9 0.00017 28.6 9.2 97 32-146 4-102 (140)
389 3qwb_A Probable quinone oxidor 87.0 1.7 5.8E-05 36.8 7.3 97 29-145 146-246 (334)
390 3l4b_C TRKA K+ channel protien 86.8 4.3 0.00015 31.9 9.2 96 34-148 2-101 (218)
391 3k31_A Enoyl-(acyl-carrier-pro 86.8 12 0.00041 30.8 12.4 110 32-145 30-167 (296)
392 2g1u_A Hypothetical protein TM 86.7 1.3 4.4E-05 33.0 5.7 102 31-149 18-121 (155)
393 3gaz_A Alcohol dehydrogenase s 86.7 1.6 5.3E-05 37.2 6.9 94 29-145 148-245 (343)
394 4eez_A Alcohol dehydrogenase 1 86.6 3.2 0.00011 35.1 8.9 99 28-145 160-262 (348)
395 1iz0_A Quinone oxidoreductase; 86.5 0.62 2.1E-05 38.9 4.2 92 29-145 123-217 (302)
396 4fgs_A Probable dehydrogenase 86.2 5.9 0.0002 32.7 10.0 109 31-145 28-158 (273)
397 1ej6_A Lambda2; icosahedral, n 85.8 1.3 4.6E-05 43.3 6.4 100 29-141 819-919 (1289)
398 2zwa_A Leucine carboxyl methyl 85.7 23 0.0008 33.1 19.2 116 82-245 189-314 (695)
399 3t4x_A Oxidoreductase, short c 85.4 4.1 0.00014 33.1 8.7 84 31-115 9-95 (267)
400 3ek2_A Enoyl-(acyl-carrier-pro 85.4 13 0.00044 29.8 11.9 111 31-145 13-152 (271)
401 1yqd_A Sinapyl alcohol dehydro 85.1 2.1 7.2E-05 36.8 7.0 96 29-145 184-281 (366)
402 3is3_A 17BETA-hydroxysteroid d 85.0 14 0.00047 29.9 11.8 112 31-145 17-151 (270)
403 1wma_A Carbonyl reductase [NAD 84.8 11 0.00039 30.0 11.2 111 31-145 3-137 (276)
404 4fn4_A Short chain dehydrogena 84.8 4.5 0.00015 33.1 8.5 82 31-115 6-94 (254)
405 3sx2_A Putative 3-ketoacyl-(ac 84.7 8.9 0.0003 31.1 10.5 83 31-116 12-113 (278)
406 3r3s_A Oxidoreductase; structu 84.5 7.5 0.00025 32.1 10.0 112 31-145 48-184 (294)
407 3h7a_A Short chain dehydrogena 84.4 5.7 0.0002 31.9 9.0 81 31-115 6-93 (252)
408 4g65_A TRK system potassium up 83.8 2.6 9E-05 37.7 7.2 101 32-148 3-104 (461)
409 4e6p_A Probable sorbitol dehyd 83.8 13 0.00043 29.9 10.9 79 31-115 7-92 (259)
410 3gvc_A Oxidoreductase, probabl 83.5 15 0.00051 30.0 11.3 79 31-115 28-113 (277)
411 3nx4_A Putative oxidoreductase 83.4 1.3 4.6E-05 37.2 4.9 90 34-145 149-240 (324)
412 3u5t_A 3-oxoacyl-[acyl-carrier 83.1 8.1 0.00028 31.4 9.5 112 31-145 26-160 (267)
413 4da9_A Short-chain dehydrogena 83.0 12 0.0004 30.6 10.5 82 31-115 28-117 (280)
414 3edm_A Short chain dehydrogena 82.9 13 0.00045 29.9 10.7 112 31-145 7-142 (259)
415 3qiv_A Short-chain dehydrogena 82.5 6.4 0.00022 31.4 8.6 82 31-115 8-96 (253)
416 3ucx_A Short chain dehydrogena 82.5 10 0.00035 30.6 9.9 82 31-115 10-98 (264)
417 2cf5_A Atccad5, CAD, cinnamyl 82.0 1.4 4.6E-05 37.9 4.5 95 29-145 177-274 (357)
418 3pvc_A TRNA 5-methylaminomethy 82.0 5.3 0.00018 37.5 8.8 123 31-158 58-222 (689)
419 3lf2_A Short chain oxidoreduct 81.6 15 0.00052 29.5 10.6 84 31-115 7-97 (265)
420 3swr_A DNA (cytosine-5)-methyl 81.6 1.2 4.1E-05 43.9 4.3 54 31-90 539-593 (1002)
421 3tjr_A Short chain dehydrogena 81.4 6.7 0.00023 32.5 8.5 82 31-115 30-118 (301)
422 2gdz_A NAD+-dependent 15-hydro 81.1 20 0.00067 28.8 11.4 83 32-115 7-96 (267)
423 3lyl_A 3-oxoacyl-(acyl-carrier 80.8 9.6 0.00033 30.2 9.0 81 32-115 5-92 (247)
424 3uve_A Carveol dehydrogenase ( 80.8 16 0.00055 29.7 10.6 82 31-115 10-114 (286)
425 3ps9_A TRNA 5-methylaminomethy 80.7 3.4 0.00012 38.7 7.0 123 31-158 66-230 (676)
426 3f9i_A 3-oxoacyl-[acyl-carrier 80.6 6.1 0.00021 31.5 7.8 79 31-115 13-94 (249)
427 2vn8_A Reticulon-4-interacting 80.6 4.7 0.00016 34.6 7.4 98 29-146 181-280 (375)
428 4dcm_A Ribosomal RNA large sub 80.5 22 0.00076 30.6 11.8 101 31-149 38-139 (375)
429 1jw9_B Molybdopterin biosynthe 80.2 7.1 0.00024 31.6 8.0 78 32-113 31-129 (249)
430 1boo_A Protein (N-4 cytosine-s 79.8 2.3 7.8E-05 36.1 5.1 64 82-149 14-87 (323)
431 3ggo_A Prephenate dehydrogenas 79.8 13 0.00043 31.2 9.7 90 33-144 34-126 (314)
432 3t7c_A Carveol dehydrogenase; 79.5 18 0.00062 29.7 10.6 82 31-115 27-127 (299)
433 3v8b_A Putative dehydrogenase, 79.1 18 0.00061 29.6 10.3 82 31-115 27-115 (283)
434 4g81_D Putative hexonate dehyd 79.0 5.7 0.0002 32.4 7.1 82 31-115 8-96 (255)
435 3gaf_A 7-alpha-hydroxysteroid 78.5 18 0.00062 28.9 10.0 82 31-115 11-99 (256)
436 1lnq_A MTHK channels, potassiu 78.1 12 0.00042 31.3 9.3 98 32-150 115-215 (336)
437 3krt_A Crotonyl COA reductase; 78.0 5.9 0.0002 35.1 7.4 99 29-145 226-343 (456)
438 1iy8_A Levodione reductase; ox 77.9 10 0.00035 30.5 8.4 84 31-115 12-102 (267)
439 3nyw_A Putative oxidoreductase 77.8 11 0.00038 30.2 8.5 84 31-115 6-97 (250)
440 3tqh_A Quinone oxidoreductase; 77.6 8.9 0.0003 32.0 8.1 92 29-145 150-244 (321)
441 3svt_A Short-chain type dehydr 77.5 26 0.00089 28.3 10.9 84 31-115 10-101 (281)
442 1ja9_A 4HNR, 1,3,6,8-tetrahydr 77.5 8.7 0.0003 30.9 7.9 81 31-115 20-109 (274)
443 4ft4_B DNA (cytosine-5)-methyl 77.1 1.8 6.1E-05 41.4 3.9 54 31-90 211-270 (784)
444 3tfo_A Putative 3-oxoacyl-(acy 77.0 10 0.00035 30.8 8.1 81 32-115 4-91 (264)
445 3g0o_A 3-hydroxyisobutyrate de 76.9 14 0.00047 30.6 9.1 91 32-146 7-102 (303)
446 3sju_A Keto reductase; short-c 76.9 11 0.00038 30.7 8.4 82 31-115 23-111 (279)
447 1xa0_A Putative NADPH dependen 76.9 1.8 6.2E-05 36.5 3.5 97 29-145 146-245 (328)
448 4fs3_A Enoyl-[acyl-carrier-pro 76.8 27 0.00093 28.0 13.2 113 31-145 5-145 (256)
449 3gqv_A Enoyl reductase; medium 76.7 8.8 0.0003 32.9 8.0 96 30-145 163-262 (371)
450 3pgx_A Carveol dehydrogenase; 76.6 26 0.0009 28.3 10.7 82 31-115 14-115 (280)
451 2hwk_A Helicase NSP2; rossman 76.6 1 3.5E-05 37.6 1.8 47 103-149 204-257 (320)
452 3ksu_A 3-oxoacyl-acyl carrier 76.3 21 0.00072 28.7 9.9 111 31-145 10-146 (262)
453 3r1i_A Short-chain type dehydr 76.2 9.3 0.00032 31.2 7.7 82 31-115 31-119 (276)
454 3rku_A Oxidoreductase YMR226C; 76.2 15 0.0005 30.2 9.0 84 31-115 32-125 (287)
455 4dry_A 3-oxoacyl-[acyl-carrier 75.8 22 0.00075 29.0 9.9 83 31-115 32-121 (281)
456 1g0o_A Trihydroxynaphthalene r 75.8 30 0.001 28.0 11.8 111 31-145 28-162 (283)
457 3ctm_A Carbonyl reductase; alc 75.7 20 0.00068 28.9 9.6 81 31-115 33-121 (279)
458 3l77_A Short-chain alcohol deh 75.6 25 0.00086 27.4 10.0 83 32-116 2-91 (235)
459 4ibo_A Gluconate dehydrogenase 75.6 15 0.00052 29.8 8.9 82 31-115 25-113 (271)
460 1yb1_A 17-beta-hydroxysteroid 75.3 18 0.00062 29.1 9.3 81 31-115 30-118 (272)
461 2aef_A Calcium-gated potassium 75.2 12 0.00041 29.6 7.9 97 32-149 9-108 (234)
462 2dpo_A L-gulonate 3-dehydrogen 75.1 7.2 0.00025 33.0 6.8 95 33-143 7-120 (319)
463 2a4k_A 3-oxoacyl-[acyl carrier 74.8 24 0.00083 28.3 9.9 78 32-115 6-90 (263)
464 1hdc_A 3-alpha, 20 beta-hydrox 74.8 25 0.00087 28.0 9.9 78 32-115 5-89 (254)
465 4dkj_A Cytosine-specific methy 74.5 2.6 8.9E-05 37.1 4.0 45 32-76 10-60 (403)
466 2rhc_B Actinorhodin polyketide 74.4 20 0.00068 29.1 9.3 81 32-115 22-109 (277)
467 1xg5_A ARPG836; short chain de 74.3 32 0.0011 27.6 13.2 82 32-115 32-121 (279)
468 3ado_A Lambda-crystallin; L-gu 74.3 7.1 0.00024 33.1 6.6 96 32-143 6-120 (319)
469 3rd5_A Mypaa.01249.C; ssgcid, 74.2 11 0.00037 30.9 7.6 78 31-115 15-96 (291)
470 3imf_A Short chain dehydrogena 74.1 9.8 0.00033 30.6 7.3 81 32-115 6-93 (257)
471 3rih_A Short chain dehydrogena 73.9 20 0.00067 29.6 9.2 83 31-115 40-129 (293)
472 4dyv_A Short-chain dehydrogena 73.7 26 0.00089 28.4 9.8 79 31-115 27-112 (272)
473 4imr_A 3-oxoacyl-(acyl-carrier 73.3 15 0.0005 29.9 8.2 81 31-115 32-119 (275)
474 3iyl_W VP1; non-enveloped viru 73.1 1.1 3.7E-05 44.2 1.2 110 17-141 815-926 (1299)
475 1spx_A Short-chain reductase f 72.7 22 0.00076 28.6 9.2 82 32-115 6-96 (278)
476 1tt7_A YHFP; alcohol dehydroge 72.6 1.8 6E-05 36.5 2.4 96 29-145 147-246 (330)
477 1zem_A Xylitol dehydrogenase; 72.5 35 0.0012 27.2 10.6 81 31-115 6-94 (262)
478 2ae2_A Protein (tropinone redu 71.9 21 0.00071 28.5 8.7 81 31-115 8-97 (260)
479 1ae1_A Tropinone reductase-I; 71.9 19 0.00066 29.0 8.6 81 31-115 20-109 (273)
480 3cxt_A Dehydrogenase with diff 71.8 22 0.00076 29.1 9.1 81 31-115 33-121 (291)
481 2jah_A Clavulanic acid dehydro 71.6 20 0.0007 28.4 8.6 81 32-115 7-94 (247)
482 2h7i_A Enoyl-[acyl-carrier-pro 71.6 23 0.00079 28.4 9.0 108 32-145 7-147 (269)
483 3pk0_A Short-chain dehydrogena 71.5 16 0.00055 29.4 8.0 83 31-115 9-98 (262)
484 3awd_A GOX2181, putative polyo 71.5 20 0.00069 28.4 8.6 81 31-115 12-100 (260)
485 2pd4_A Enoyl-[acyl-carrier-pro 71.4 38 0.0013 27.2 11.4 110 32-145 6-143 (275)
486 1zcj_A Peroxisomal bifunctiona 71.3 29 0.00099 30.8 10.2 95 33-144 38-148 (463)
487 2eez_A Alanine dehydrogenase; 71.2 4 0.00014 35.2 4.4 99 31-146 165-266 (369)
488 3op4_A 3-oxoacyl-[acyl-carrier 71.0 33 0.0011 27.2 9.7 79 31-115 8-93 (248)
489 2qq5_A DHRS1, dehydrogenase/re 70.8 20 0.0007 28.6 8.5 78 32-113 5-91 (260)
490 2ew2_A 2-dehydropantoate 2-red 70.8 40 0.0014 27.5 10.5 98 33-145 4-107 (316)
491 4egf_A L-xylulose reductase; s 70.5 19 0.00065 29.0 8.3 83 31-115 19-108 (266)
492 3oec_A Carveol dehydrogenase ( 70.3 37 0.0013 28.1 10.2 82 31-115 45-145 (317)
493 1zud_1 Adenylyltransferase THI 70.2 28 0.00095 28.0 9.1 77 32-112 28-125 (251)
494 3av4_A DNA (cytosine-5)-methyl 69.9 3.9 0.00013 41.5 4.5 45 31-75 850-895 (1330)
495 4a0s_A Octenoyl-COA reductase/ 69.8 6.4 0.00022 34.7 5.5 100 29-145 218-335 (447)
496 3tsc_A Putative oxidoreductase 69.6 42 0.0014 27.0 10.6 83 31-116 10-112 (277)
497 3s55_A Putative short-chain de 69.6 42 0.0014 27.0 10.6 82 31-115 9-109 (281)
498 2cvz_A Dehydrogenase, 3-hydrox 69.0 44 0.0015 26.9 10.3 85 34-145 3-89 (289)
499 3ftp_A 3-oxoacyl-[acyl-carrier 69.0 16 0.00055 29.6 7.5 82 31-115 27-115 (270)
500 3qha_A Putative oxidoreductase 68.9 24 0.00083 29.0 8.7 88 33-146 16-105 (296)
No 1
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.98 E-value=6.3e-32 Score=233.61 Aligned_cols=228 Identities=17% Similarity=0.248 Sum_probs=167.0
Q ss_pred CccCCCCCcchHHhHHHHHHHHHHHHhcCC-------CCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHH
Q 025059 2 SVLPIPRSELTHHRLYEFAKTALIKIYSHP-------YVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTW 74 (258)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~k~~li~~~~~~-------~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~ 74 (258)
+||+..|+++|++.++||+++.+++.+++. +.+|||||||+|.++..++..+..+|+|+|+|+.||+.|++++
T Consensus 12 ~~f~~~r~~~~~~~~nn~vks~li~~~~~~~~~~~~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~ 91 (302)
T 2vdw_A 12 SYFTNKRTRGPLGILSNYVKTLLISMYCSKTFLDDSNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERY 91 (302)
T ss_dssp CCBCSSCCCHHHHHHHHHHHHHHHHHHTCTTTSSCCSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHH
T ss_pred chhccccccchHHHHHHHHHHHHHHHHHhhhhhccCCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHH
Confidence 689999999999999999999999998763 7899999999999998887777679999999999999999998
Q ss_pred HhcCCC-----ceeEEEEcCCCCCchhhhhh--hcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 75 ENQRKN-----FIAEFFEADPCAENFETQMQ--EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 75 ~~~~~~-----~~~~~~~~d~~~~~~~~~~~--~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
...+.. +.+.|.+.|+....+...++ .++++||+|+|++++||++.+. +...++++++++|||||+|++++|
T Consensus 92 ~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~-~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 92 NKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPR-HYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp HHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTT-THHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhccccccccccccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHH-HHHHHHHHHHHHcCCCCEEEEEeC
Confidence 765321 13678899886544322221 1457999999999999977654 457999999999999999999999
Q ss_pred CchHHHHHHHHhHHhhhcCCCCCCCCCCCCcccCeeEEEEecccCCCCCCceeceE-EEEcc-CccCCCccccchHHHHH
Q 025059 148 DSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITFEVEEEKFPLFGKKYQ-LKFAN-DISAETQCLVHFPSLIR 225 (258)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~f~~~~~~~~~~g~~y~-~~l~~-~~~~~~e~lv~~~~l~~ 225 (258)
+...+...+.+. + . .++++.+..+.|. .+. .++..+. .+... ...++++|++++++|++
T Consensus 171 ~~~~~~~~~~~~-------~--~--~i~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~e~~v~~~el~~ 231 (302)
T 2vdw_A 171 DGDKLSKLTDKK-------T--F--IIHKNLPSSENYM-SVE-------KIADDRIVVYNPSTMSTPMTEYIIKKNDIVR 231 (302)
T ss_dssp CHHHHTTCCSCE-------E--E--ECCSSSCTTTSEE-EEC-------EEETTEEEEBCTTTBSSCEEEECCCHHHHHH
T ss_pred CHHHHHHHHhcC-------C--c--cccccccccccee-eec-------cccccccceeeccccCCCceeeeeEHHHHHH
Confidence 987664322100 0 0 0112211111111 000 0000110 11112 24467789999999999
Q ss_pred HHHHcCcEEEEeCChhHHHHhccC
Q 025059 226 LAREAGLEYVEIQNLNEFYDDNRH 249 (258)
Q Consensus 226 ~~~~~Gf~~~~~~~f~~~~~~~~~ 249 (258)
+++++||++++..+|.++|+++++
T Consensus 232 l~~~~Gl~lv~~~~f~~~~~~~~~ 255 (302)
T 2vdw_A 232 VFNEYGFVLVDNVDFATIIERSKK 255 (302)
T ss_dssp HHHHTTEEEEEEEEHHHHHHHHHH
T ss_pred HHHHCCCEEEEecChHHHHHHHHH
Confidence 999999999999999999999875
No 2
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.96 E-value=1.7e-28 Score=212.95 Aligned_cols=224 Identities=28% Similarity=0.498 Sum_probs=175.6
Q ss_pred CcchHH-hHHHHHHHHHHHHhcC-------CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcC--
Q 025059 9 SELTHH-RLYEFAKTALIKIYSH-------PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQR-- 78 (258)
Q Consensus 9 ~~~~~~-~~~~~~k~~li~~~~~-------~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-- 78 (258)
|+.... .++||+++.++..++. ++.+|||+|||+|.++..++..+..+++|+|+|+.|++.|+++.....
T Consensus 4 s~i~~lr~~~~~~k~~l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~ 83 (313)
T 3bgv_A 4 SRIFYLRNFNNWMKSVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNR 83 (313)
T ss_dssp -CTHHHHHHHHHHHHHHHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSS
T ss_pred CcchhhhhccHHHHHHHHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhc
Confidence 444444 4789999998887754 778999999999999999988766799999999999999999886531
Q ss_pred ----CCceeEEEEcCCCCCchhhhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHHHH
Q 025059 79 ----KNFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWA 154 (258)
Q Consensus 79 ----~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~~ 154 (258)
...++.++++|+...++.+.++.++++||+|++.+++|+++.+.++...++.++.++|+|||.+++++++...+..
T Consensus 84 ~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~ 163 (313)
T 3bgv_A 84 RDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIR 163 (313)
T ss_dssp SCC-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHH
T ss_pred ccccccceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHH
Confidence 1236899999998765322222234689999999999997788899999999999999999999999999877665
Q ss_pred HHHHhHHhhhcCCCCCCCCCCCCcccCeeEEEEecccCCCCCCceeceEEEEccCccCCCccccchHHHHHHHHHcCcEE
Q 025059 155 KYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITFEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEY 234 (258)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~f~~~~~~~~~~g~~y~~~l~~~~~~~~e~lv~~~~l~~~~~~~Gf~~ 234 (258)
.+.+. .. ..+| +..|++.|... ...+.++..|.|.+... .++++|+++++.+.++++++||++
T Consensus 164 ~~~~~------~~-----~~~~----~~~~~~~f~~~-~~~~~~~~~~~f~l~~~-~~~~~~~~~~~~~~~l~~~~G~~~ 226 (313)
T 3bgv_A 164 RLEAS------ET-----ESFG----NEIYTVKFQKK-GDYPLFGCKYDFNLEGV-VDVPEFLVYFPLLNEMAKKYNMKL 226 (313)
T ss_dssp HHTTS------SS-----SEEE----CSSEEEEESCS-SCCCSSCCEEEEEEC----CCEEECCCHHHHHHHGGGGTEEE
T ss_pred HHHhh------cc-----CccC----CeeEEEEeCCC-CCCCCccceEEEEECCc-ccCcceEEcHHHHHHHHHHcCcEE
Confidence 54321 00 1233 44688888743 24577889999988543 367899999999999999999999
Q ss_pred EEeCChhHHHHhccC
Q 025059 235 VEIQNLNEFYDDNRH 249 (258)
Q Consensus 235 ~~~~~f~~~~~~~~~ 249 (258)
++..+|.++++++..
T Consensus 227 v~~~~f~~~g~~~~~ 241 (313)
T 3bgv_A 227 VYKKTFLEFYEEKIK 241 (313)
T ss_dssp EEEEEHHHHHHHHTT
T ss_pred EEecCHHHHHHHhcc
Confidence 999999999998775
No 3
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.96 E-value=3.1e-27 Score=202.68 Aligned_cols=212 Identities=26% Similarity=0.493 Sum_probs=177.8
Q ss_pred HhHHHHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCC
Q 025059 14 HRLYEFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE 93 (258)
Q Consensus 14 ~~~~~~~k~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~ 93 (258)
..+++|++..++..+++++.+|||+|||+|.++..++..+..+++|+|+|+.+++.|+++....+...++.++++|+.+.
T Consensus 47 ~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 126 (298)
T 1ri5_A 47 RNANNFIKACLIRLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR 126 (298)
T ss_dssp HHHHHHHHHHHHHHHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccc
Confidence 34679999999998999999999999999999999888776699999999999999999998765444789999999776
Q ss_pred chhhhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHHHHHHHHhHHhhhcCCCCCCCC
Q 025059 94 NFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPN 173 (258)
Q Consensus 94 ~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (258)
++. ++++||+|++..++|+.+.+.++...+++++.++|+|||.+++++|+...+...+...
T Consensus 127 ~~~-----~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~-------------- 187 (298)
T 1ri5_A 127 HMD-----LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQG-------------- 187 (298)
T ss_dssp CCC-----CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHT--------------
T ss_pred ccC-----CCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccC--------------
Confidence 541 3678999999999998778899999999999999999999999999987776655421
Q ss_pred CCCCcccCeeEEEEecccCCCCCC-ceeceEEEEccCccCCCccccchHHHHHHHHHcCcEEEEeCChhHHHHhccC
Q 025059 174 LVPNCIRSESYVITFEVEEEKFPL-FGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLNEFYDDNRH 249 (258)
Q Consensus 174 ~~g~~~~~~~~~i~f~~~~~~~~~-~g~~y~~~l~~~~~~~~e~lv~~~~l~~~~~~~Gf~~~~~~~f~~~~~~~~~ 249 (258)
.++ +..|++.|+... ..|. +|..|.+++.+.+....+++++++++.++++++||++++...|..+|.....
T Consensus 188 ~~~----~~~~~~~~~~~~-~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~~~~~~~~~ 259 (298)
T 1ri5_A 188 RMS----NDFYKIELEKME-DVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGFIDFYEDEGR 259 (298)
T ss_dssp CCB----CSSEEEECCCCS-SCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEHHHHHHHHHH
T ss_pred ccC----CeeEEEEeCccc-cccccccceEEEEEchhhcCCcccccCHHHHHHHHHHcCCEEEEecCHHHHHHHHHH
Confidence 233 345777776432 3344 8888999888877667788999999999999999999999999999988653
No 4
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.85 E-value=1.9e-20 Score=158.44 Aligned_cols=114 Identities=21% Similarity=0.226 Sum_probs=98.8
Q ss_pred HHHHHHhcCCCCEEEEEcCCCCccHHHHHHc---CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh
Q 025059 22 TALIKIYSHPYVTVCDLYCGAGVDVDKWETA---LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ 98 (258)
Q Consensus 22 ~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 98 (258)
..++..+++|+.+|||||||+|..+..+++. ...+|+|+|+|+.|++.|++++...+...+++++++|+.+.++
T Consensus 61 ~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~--- 137 (261)
T 4gek_A 61 GMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI--- 137 (261)
T ss_dssp HHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC---
T ss_pred HHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc---
Confidence 3566778899999999999999999988875 2348999999999999999999877666689999999977554
Q ss_pred hhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 99 MQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 99 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+.||+|++.+++|+ .+.++...+++++.++|||||.|++.
T Consensus 138 -----~~~d~v~~~~~l~~--~~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 138 -----ENASMVVLNFTLQF--LEPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp -----CSEEEEEEESCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----cccccceeeeeeee--cCchhHhHHHHHHHHHcCCCcEEEEE
Confidence 56999999999997 45677788999999999999999987
No 5
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.83 E-value=6.6e-20 Score=155.08 Aligned_cols=141 Identities=16% Similarity=0.131 Sum_probs=106.0
Q ss_pred ccCCCCCcchHHhHHHHHHHHHHHHh---cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCC
Q 025059 3 VLPIPRSELTHHRLYEFAKTALIKIY---SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRK 79 (258)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~k~~li~~~---~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~ 79 (258)
+|..+|+..+...+.+|....+-+.+ ..++.+|||||||+|.++..++..+..+|+|+|+|+.|++.|++++.....
T Consensus 24 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~ 103 (263)
T 2a14_A 24 YYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPG 103 (263)
T ss_dssp HCCCCCSCCHHHHHHHHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTT
T ss_pred hcCCCcccchhhHHHHHHHHHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCC
Confidence 45555555555557788876665544 236789999999999887776666666899999999999999987654311
Q ss_pred C----------------------------ceeE-EEEcCCCCC-chhhhhhhcCCceeEEEeccccccccCCHHHHHHHH
Q 025059 80 N----------------------------FIAE-FFEADPCAE-NFETQMQEKANQADLVCCFQHLQMCFETEERARRLL 129 (258)
Q Consensus 80 ~----------------------------~~~~-~~~~d~~~~-~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l 129 (258)
. .++. ++++|+.+. ++.+. ..++||+|++.+++|++..+.++...++
T Consensus 104 ~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~---~~~~fD~V~~~~~l~~i~~~~~~~~~~l 180 (263)
T 2a14_A 104 AYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPA---VLPLADCVLTLLAMECACCSLDAYRAAL 180 (263)
T ss_dssp CCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTC---CCCCEEEEEEESCHHHHCSSHHHHHHHH
T ss_pred cccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCcc---ccCCCCEeeehHHHHHhcCCHHHHHHHH
Confidence 0 0233 889998763 22100 2568999999999998767778899999
Q ss_pred HHHHhcccCCcEEEEEE
Q 025059 130 QNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 130 ~~i~~~LkpgG~~i~~~ 146 (258)
+++.++|||||.|+++.
T Consensus 181 ~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 181 CNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHHHTTEEEEEEEEEEE
T ss_pred HHHHHHcCCCcEEEEEE
Confidence 99999999999999984
No 6
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.80 E-value=6.3e-19 Score=145.46 Aligned_cols=117 Identities=21% Similarity=0.266 Sum_probs=98.4
Q ss_pred HHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCC----CceeEEEEcCCCCCchhhhhh
Q 025059 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRK----NFIAEFFEADPCAENFETQMQ 100 (258)
Q Consensus 25 i~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~ 100 (258)
+..+++++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++....+. ..++.+.++|+...++
T Consensus 24 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----- 97 (235)
T 3sm3_A 24 IHNYLQEDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF----- 97 (235)
T ss_dssp HHHHCCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS-----
T ss_pred HHHhCCCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC-----
Confidence 345567889999999999999999988855 999999999999999998876542 2258999999987665
Q ss_pred hcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 101 EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 101 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
++++||+|++..++++ +.+......+++++.++|+|||.++++.+..
T Consensus 98 -~~~~~D~v~~~~~l~~-~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 98 -HDSSFDFAVMQAFLTS-VPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp -CTTCEEEEEEESCGGG-CCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred -CCCceeEEEEcchhhc-CCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 5789999999999887 3456777799999999999999999986654
No 7
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.80 E-value=1.6e-18 Score=147.80 Aligned_cols=117 Identities=19% Similarity=0.175 Sum_probs=97.4
Q ss_pred HHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCc-hhhhhhhc
Q 025059 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAEN-FETQMQEK 102 (258)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~ 102 (258)
++.....++.+|||||||+|..+..++..+. +++|+|+|+.+++.|+++....+...++.++++|+.+.+ + .
T Consensus 61 ~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~ 133 (285)
T 4htf_A 61 VLAEMGPQKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH------L 133 (285)
T ss_dssp HHHHTCSSCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG------C
T ss_pred HHHhcCCCCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh------c
Confidence 4444555678999999999999999988755 999999999999999999887655447999999986654 3 5
Q ss_pred CCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchH
Q 025059 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSST 151 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~ 151 (258)
+++||+|++..++++. ++...+++++.++|+|||.+++..++...
T Consensus 134 ~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 178 (285)
T 4htf_A 134 ETPVDLILFHAVLEWV----ADPRSVLQTLWSVLRPGGVLSLMFYNAHG 178 (285)
T ss_dssp SSCEEEEEEESCGGGC----SCHHHHHHHHHHTEEEEEEEEEEEEBHHH
T ss_pred CCCceEEEECchhhcc----cCHHHHHHHHHHHcCCCeEEEEEEeCCch
Confidence 6899999999998873 33578999999999999999999888754
No 8
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.79 E-value=1.2e-17 Score=141.23 Aligned_cols=118 Identities=20% Similarity=0.229 Sum_probs=97.2
Q ss_pred HHHHHHHh-cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhh
Q 025059 21 KTALIKIY-SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQM 99 (258)
Q Consensus 21 k~~li~~~-~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 99 (258)
...+++.. ..++.+|||||||+|..+..++.....+++|+|+|+.+++.|+++....+...++.+.++|+.+.++
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---- 125 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF---- 125 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS----
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC----
Confidence 33444443 3578999999999999999988764569999999999999999998876554479999999987665
Q ss_pred hhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 100 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
++++||+|++..+++++ .+...+++++.++|+|||.++++.+.
T Consensus 126 --~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 126 --EDASFDAVWALESLHHM----PDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp --CTTCEEEEEEESCTTTS----SCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred --CCCCccEEEEechhhhC----CCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 56899999999988873 33578999999999999999998654
No 9
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.79 E-value=1.5e-19 Score=152.50 Aligned_cols=103 Identities=15% Similarity=0.160 Sum_probs=87.0
Q ss_pred HHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 26 ~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
..+.+.+.+|||||||+|..+..++..+. +|+|+|+|+.|++.|+++ .++.+.++|+.+.++ ++++
T Consensus 34 ~~~~~~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~~-------~~v~~~~~~~e~~~~------~~~s 99 (257)
T 4hg2_A 34 GEVAPARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALRH-------PRVTYAVAPAEDTGL------PPAS 99 (257)
T ss_dssp HHHSSCSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCCC-------TTEEEEECCTTCCCC------CSSC
T ss_pred HHhcCCCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhhc-------CCceeehhhhhhhcc------cCCc
Confidence 34556678999999999999999977664 999999999999887542 178999999988877 7899
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
||+|+|..++|+. . ...++.++.++|||||.|++...
T Consensus 100 fD~v~~~~~~h~~-~----~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 100 VDVAIAAQAMHWF-D----LDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp EEEEEECSCCTTC-C----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccEEEEeeehhHh-h----HHHHHHHHHHHcCCCCEEEEEEC
Confidence 9999999999872 3 45789999999999999988744
No 10
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.78 E-value=9e-19 Score=150.55 Aligned_cols=119 Identities=18% Similarity=0.122 Sum_probs=96.4
Q ss_pred HHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCC--ceeEEEEcCCCCCchhhhhhh
Q 025059 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKN--FIAEFFEADPCAENFETQMQE 101 (258)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~ 101 (258)
++.....++.+|||||||+|.++..++..+. +++|+|+|+.+++.|+++....+.. .++.++++|+.+.++
T Consensus 75 ~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~------ 147 (299)
T 3g2m_A 75 FATRTGPVSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL------ 147 (299)
T ss_dssp HHHHHCCCCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC------
T ss_pred HHHhhCCCCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc------
Confidence 3444445556999999999999999988765 8999999999999999998765311 268999999977553
Q ss_pred cCCceeEEEeccc-cccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHH
Q 025059 102 KANQADLVCCFQH-LQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (258)
Q Consensus 102 ~~~~fD~V~~~~~-l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~ 152 (258)
+++||+|+|.+. +++ .+.++...+++++.++|+|||.+++.+++....
T Consensus 148 -~~~fD~v~~~~~~~~~--~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 148 -DKRFGTVVISSGSINE--LDEADRRGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp -SCCEEEEEECHHHHTT--SCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred -CCCcCEEEECCccccc--CCHHHHHHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 579999987644 444 456778999999999999999999999888654
No 11
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.78 E-value=4.1e-18 Score=146.65 Aligned_cols=173 Identities=14% Similarity=0.129 Sum_probs=122.5
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
.+++.+|||||||+|..+..++.. + .+++|+|+|+.+++.|+++....+...++.+.++|+.+ + +++||
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~-------~~~fD 139 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE--F-------DEPVD 139 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG--C-------CCCCS
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH--c-------CCCcc
Confidence 458899999999999999999887 6 59999999999999999999887665579999999743 2 57899
Q ss_pred EEEeccccccccC-----CHHHHHHHHHHHHhcccCCcEEEEEEcCchHHHHHHHHhHHhhhcCCCCCCCCCCCCcccCe
Q 025059 108 LVCCFQHLQMCFE-----TEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSE 182 (258)
Q Consensus 108 ~V~~~~~l~~~~~-----~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 182 (258)
+|++..+++++.. +.+....+++++.++|+|||.+++..+............ . .+.
T Consensus 140 ~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~--------~-----~~~------ 200 (302)
T 3hem_A 140 RIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELG--------L-----TSP------ 200 (302)
T ss_dssp EEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHT--------C-----CCC------
T ss_pred EEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhcc--------c-----ccc------
Confidence 9999999987433 336778999999999999999999865432211110000 0 000
Q ss_pred eEEEEecccCCCCCCceeceEEEEccCccCCCccccchHHHHHHHHHcCcEEEEeCChhHHHH
Q 025059 183 SYVITFEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLNEFYD 245 (258)
Q Consensus 183 ~~~i~f~~~~~~~~~~g~~y~~~l~~~~~~~~e~lv~~~~l~~~~~~~Gf~~~~~~~f~~~~~ 245 (258)
+... ....|-..|.+ ...++.+.+.+.++++++||+++....+...|.
T Consensus 201 -----~~~~--~~~~~~~~~~~--------p~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~y~ 248 (302)
T 3hem_A 201 -----MSLL--RFIKFILTEIF--------PGGRLPRISQVDYYSSNAGWKVERYHRIGANYV 248 (302)
T ss_dssp -----HHHH--HHHHHHHHHTC--------TTCCCCCHHHHHHHHHHHTCEEEEEEECGGGHH
T ss_pred -----cccc--chHHHHHHhcC--------CCCCCCCHHHHHHHHHhCCcEEEEEEeCchhHH
Confidence 0000 00000001111 112467889999999999999998887766553
No 12
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.77 E-value=1.7e-18 Score=140.84 Aligned_cols=109 Identities=15% Similarity=0.088 Sum_probs=89.1
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcC-----------CCceeEEEEcCCCCCchhh
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQR-----------KNFIAEFFEADPCAENFET 97 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-----------~~~~~~~~~~d~~~~~~~~ 97 (258)
.+++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.|+++..... ...++.++++|+.+.++
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~-- 96 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA-- 96 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH--
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCc--
Confidence 45789999999999999999988876 99999999999999998864210 01268999999988665
Q ss_pred hhhhcC-CceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 98 QMQEKA-NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 98 ~~~~~~-~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
.+ ++||+|++..++++ .+.+....+++++.++|||||.+++.+
T Consensus 97 ----~~~~~fD~v~~~~~l~~--l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 97 ----RDIGHCAAFYDRAAMIA--LPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp ----HHHHSEEEEEEESCGGG--SCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred ----ccCCCEEEEEECcchhh--CCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 23 68999999888876 346677889999999999999855553
No 13
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.77 E-value=7e-19 Score=146.25 Aligned_cols=107 Identities=11% Similarity=0.145 Sum_probs=90.9
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
++.+|||||||+|..+..++..+. +++|+|+|+.+++.|+++... ++.++++|+.+. . ++++||+|+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~-~------~~~~fD~v~ 108 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD-----GITYIHSRFEDA-Q------LPRRYDNIV 108 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGC-C------CSSCEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHc-C------cCCcccEEE
Confidence 678999999999999999877765 899999999999999988753 588999998654 2 468999999
Q ss_pred eccccccccCCHHHHHHHHHHHH-hcccCCcEEEEEEcCchHHHH
Q 025059 111 CFQHLQMCFETEERARRLLQNVS-SLLKPGGYFLGITPDSSTIWA 154 (258)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~i~-~~LkpgG~~i~~~~~~~~~~~ 154 (258)
+..+++++ ++...+++++. ++|+|||.++++.|+......
T Consensus 109 ~~~~l~~~----~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~ 149 (250)
T 2p7i_A 109 LTHVLEHI----DDPVALLKRINDDWLAEGGRLFLVCPNANAVSR 149 (250)
T ss_dssp EESCGGGC----SSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHH
T ss_pred EhhHHHhh----cCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHH
Confidence 99999874 23578999999 999999999999998765543
No 14
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.77 E-value=1.3e-17 Score=140.23 Aligned_cols=107 Identities=17% Similarity=0.240 Sum_probs=90.7
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|..+..++.... +++|+|+|+.|++.|+++....+.. ++.+.++|+.+.++ ++++||+
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l~~------~~~~fD~ 106 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQMPF------TDERFHI 106 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CCCS------CTTCEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhCCC------CCCCEEE
Confidence 34789999999999999988877765 9999999999999999998765433 68999999987666 5789999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
|++..++|+. .+...++.++.++|+|||.++++.+
T Consensus 107 V~~~~~l~~~----~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 107 VTCRIAAHHF----PNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp EEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEhhhhHhc----CCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 9999999874 2457899999999999999999743
No 15
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.77 E-value=3.4e-18 Score=143.23 Aligned_cols=105 Identities=18% Similarity=0.150 Sum_probs=92.0
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++.... ++.+.++|+.+.++ ++++||+|+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~d~~~~~~------~~~~fD~v~ 113 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSP----VVCYEQKAIEDIAI------EPDAYNVVL 113 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCCT----TEEEEECCGGGCCC------CTTCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhccC----CeEEEEcchhhCCC------CCCCeEEEE
Confidence 78999999999999999998887669999999999999999887622 78999999876554 578999999
Q ss_pred eccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+..++++. ++...+++++.++|+|||.+++++++.
T Consensus 114 ~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 148 (253)
T 3g5l_A 114 SSLALHYI----ASFDDICKKVYINLKSSGSFIFSVEHP 148 (253)
T ss_dssp EESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred Echhhhhh----hhHHHHHHHHHHHcCCCcEEEEEeCCC
Confidence 99999874 447889999999999999999998775
No 16
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.77 E-value=1.5e-18 Score=144.11 Aligned_cols=110 Identities=21% Similarity=0.315 Sum_probs=93.1
Q ss_pred HHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCC
Q 025059 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (258)
Q Consensus 25 i~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (258)
+..+++++.+|||||||+|..+..++..+. +++|+|+|+.+++.|+++.... ++.++++|+.+.++ +++
T Consensus 47 l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~d~~~~~~------~~~ 115 (242)
T 3l8d_A 47 FEQYVKKEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERGEGP----DLSFIKGDLSSLPF------ENE 115 (242)
T ss_dssp HHHHSCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTTCBT----TEEEEECBTTBCSS------CTT
T ss_pred HHHHcCCCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhcccC----CceEEEcchhcCCC------CCC
Confidence 344567889999999999999999988765 9999999999999998875322 78999999987665 578
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+||+|++..++++. ++...+++++.++|+|||.++++.++.
T Consensus 116 ~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 116 QFEAIMAINSLEWT----EEPLRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp CEEEEEEESCTTSS----SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CccEEEEcChHhhc----cCHHHHHHHHHHHhCCCeEEEEEEcCC
Confidence 99999999988873 346689999999999999999997654
No 17
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.77 E-value=1.4e-18 Score=140.78 Aligned_cols=143 Identities=14% Similarity=0.050 Sum_probs=113.2
Q ss_pred CCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEEe
Q 025059 32 YVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~ 111 (258)
+.+|||+|||+|.++..++..+. +++|+|+|+.|++.|+++.. ++.++++|+.+.++ ++++||+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~------~~~~fD~v~~ 108 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTHP------SVTFHHGTITDLSD------SPKRWAGLLA 108 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHCT------TSEEECCCGGGGGG------SCCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhCC------CCeEEeCccccccc------CCCCeEEEEe
Confidence 78999999999999999988765 89999999999999998743 67899999866554 5789999999
Q ss_pred ccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHHHHHHHHhHHhhhcCCCCCCCCCCCCcccCeeEEEEeccc
Q 025059 112 FQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITFEVE 191 (258)
Q Consensus 112 ~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~f~~~ 191 (258)
..++++. ..++...+++++.++|+|||.++++.++.... -.+..
T Consensus 109 ~~~l~~~--~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~---------------------------------~~~~~- 152 (203)
T 3h2b_A 109 WYSLIHM--GPGELPDALVALRMAVEDGGGLLMSFFSGPSL---------------------------------EPMYH- 152 (203)
T ss_dssp ESSSTTC--CTTTHHHHHHHHHHTEEEEEEEEEEEECCSSC---------------------------------EEECC-
T ss_pred hhhHhcC--CHHHHHHHHHHHHHHcCCCcEEEEEEccCCch---------------------------------hhhhc-
Confidence 9998873 34568899999999999999999986654210 00100
Q ss_pred CCCCCCceeceEEEEccCccCCCccccchHHHHHHHHHcCcEEEEeCChhH
Q 025059 192 EEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLNE 242 (258)
Q Consensus 192 ~~~~~~~g~~y~~~l~~~~~~~~e~lv~~~~l~~~~~~~Gf~~~~~~~f~~ 242 (258)
. ....+..+.+.+.++++++||+++....+..
T Consensus 153 -----------------~--~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 153 -----------------P--VATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp -----------------S--SSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred -----------------h--hhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 0 0112456899999999999999998876654
No 18
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.77 E-value=1.3e-17 Score=140.95 Aligned_cols=108 Identities=16% Similarity=0.117 Sum_probs=94.3
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
+++.+|||||||+|..+..++..+..+++|+|+|+.+++.|+++....+...++.++++|+.+.++ ++++||+|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~~fD~i 118 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF------RNEELDLI 118 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC------CTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC------CCCCEEEE
Confidence 578999999999999999998886669999999999999999998877654479999999977665 57899999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
++..++++. +...+++++.++|+|||.+++..+.
T Consensus 119 ~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 119 WSEGAIYNI-----GFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp EESSCGGGT-----CHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred EEcCCceec-----CHHHHHHHHHHHcCCCCEEEEEEee
Confidence 999999874 3678999999999999999998653
No 19
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.77 E-value=1.7e-17 Score=137.75 Aligned_cols=125 Identities=18% Similarity=0.241 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCch
Q 025059 16 LYEFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (258)
Q Consensus 16 ~~~~~k~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (258)
...++...+ ....+++.+|||+|||+|..+..++..+. +++|+|+|+.|++.|+++....+. ++.+.++|+.+.++
T Consensus 23 ~~~~~~~~l-~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~ 98 (246)
T 1y8c_A 23 WSDFIIEKC-VENNLVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNI 98 (246)
T ss_dssp HHHHHHHHH-HTTTCCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCC
T ss_pred HHHHHHHHH-HHhCCCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCc
Confidence 334444443 33334778999999999999999988765 899999999999999999876543 68899999866543
Q ss_pred hhhhhhcCCceeEEEecc-ccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHH
Q 025059 96 ETQMQEKANQADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (258)
Q Consensus 96 ~~~~~~~~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~ 152 (258)
+ ++||+|++.. ++++. .+.++...+++++.++|+|||.+++.+++...+
T Consensus 99 ------~-~~fD~v~~~~~~l~~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 148 (246)
T 1y8c_A 99 ------N-RKFDLITCCLDSTNYI-IDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKL 148 (246)
T ss_dssp ------S-CCEEEEEECTTGGGGC-CSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHH
T ss_pred ------c-CCceEEEEcCcccccc-CCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHH
Confidence 3 7899999998 88873 456788999999999999999999998886554
No 20
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.77 E-value=1.2e-17 Score=140.00 Aligned_cols=108 Identities=16% Similarity=0.113 Sum_probs=94.3
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
+++.+|||+|||+|..+..++.....+++|+|+|+.+++.|+++....+...++.++++|+...++ ++++||+|
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~fD~v 118 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPF------QNEELDLI 118 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSS------CTTCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCC------CCCCEEEE
Confidence 477899999999999999998886669999999999999999999877655469999999977665 57899999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
++..++++. +...+++++.++|+|||.++++.++
T Consensus 119 ~~~~~l~~~-----~~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 119 WSEGAIYNI-----GFERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp EEESCSCCC-----CHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred EecChHhhc-----CHHHHHHHHHHHcCCCcEEEEEEee
Confidence 999998873 3678999999999999999998654
No 21
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.77 E-value=3.9e-17 Score=139.58 Aligned_cols=121 Identities=21% Similarity=0.243 Sum_probs=95.1
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCC---CceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRK---NFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
.++.+|||||||+|..+..++..+. +++|+|+|+.|++.|+++...... ..++.+..+|+...+ ..+ .++++|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~-~~~~~f 131 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD--KDV-PAGDGF 131 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH--HHS-CCTTCE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCc--ccc-ccCCCe
Confidence 3678999999999999999988876 999999999999999887643221 115678888875533 000 146899
Q ss_pred eEEEec-cccccccC---CHHHHHHHHHHHHhcccCCcEEEEEEcCchHHHH
Q 025059 107 DLVCCF-QHLQMCFE---TEERARRLLQNVSSLLKPGGYFLGITPDSSTIWA 154 (258)
Q Consensus 107 D~V~~~-~~l~~~~~---~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~~ 154 (258)
|+|+|. .+++++.. +.+....+++++.++|+|||+++++.++...+..
T Consensus 132 D~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 183 (293)
T 3thr_A 132 DAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILS 183 (293)
T ss_dssp EEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHH
T ss_pred EEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCHHHHhh
Confidence 999998 78887432 2467899999999999999999999999776654
No 22
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.77 E-value=2.4e-17 Score=140.56 Aligned_cols=111 Identities=17% Similarity=0.184 Sum_probs=91.7
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.+++.+|||||||+|..+..++.....+++|+|+|+.+++.|+++....+...++.+.++|+.+ + + ++||+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~------~-~~fD~ 132 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ--F------D-EPVDR 132 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG--C------C-CCCSE
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh--C------C-CCeeE
Confidence 4578899999999999999888542339999999999999999998876554578999999743 2 3 78999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
|++..+++++ +.++...+++++.++|+|||.+++..+...
T Consensus 133 v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 133 IVSIGAFEHF--GHERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp EEEESCGGGT--CTTTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred EEEeCchhhc--ChHHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 9999988873 235678899999999999999999876653
No 23
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.77 E-value=2.9e-18 Score=139.79 Aligned_cols=119 Identities=15% Similarity=0.065 Sum_probs=97.7
Q ss_pred HHHHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhh
Q 025059 21 KTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ 100 (258)
Q Consensus 21 k~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 100 (258)
...+++....++.+|||+|||+|..+..++.....+++|+|+|+.+++.|+++....+...++.+.++|+.+.++
T Consensus 33 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----- 107 (219)
T 3dlc_A 33 AENIINRFGITAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI----- 107 (219)
T ss_dssp HHHHHHHHCCCEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS-----
T ss_pred HHHHHHhcCCCCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC-----
Confidence 334444444333499999999999999998874459999999999999999998876655579999999987665
Q ss_pred hcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 101 EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 101 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
++++||+|++..++++. ++...+++++.++|+|||.+++..+..
T Consensus 108 -~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 108 -EDNYADLIVSRGSVFFW----EDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp -CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred -CcccccEEEECchHhhc----cCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 57899999999999874 446789999999999999999986554
No 24
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.77 E-value=3e-18 Score=146.61 Aligned_cols=128 Identities=16% Similarity=0.126 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHhc---CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCC--------------
Q 025059 17 YEFAKTALIKIYS---HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRK-------------- 79 (258)
Q Consensus 17 ~~~~k~~li~~~~---~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-------------- 79 (258)
..|....+...+. .++.+|||||||+|.....++.....+|+|+|+|+.|++.|++++.....
T Consensus 54 ~~~~~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~ 133 (289)
T 2g72_A 54 GPWKLRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLI 133 (289)
T ss_dssp HHHHHHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHh
Confidence 3444444444432 26789999999999954433333445999999999999999886542110
Q ss_pred -C--------------ceeEEEEcCCCC-CchhhhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEE
Q 025059 80 -N--------------FIAEFFEADPCA-ENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (258)
Q Consensus 80 -~--------------~~~~~~~~d~~~-~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i 143 (258)
+ ..+.++++|+.+ .++... ..++++||+|++.++++++....++...+++++.++|||||.|+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~ 212 (289)
T 2g72_A 134 EGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAG-SPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLL 212 (289)
T ss_dssp HCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSS-CSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred cCcccchhhhHHHHHhhhceEEecccCCCCCcccc-ccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 0 015677888876 443110 00356799999999999866667789999999999999999999
Q ss_pred EE
Q 025059 144 GI 145 (258)
Q Consensus 144 ~~ 145 (258)
+.
T Consensus 213 ~~ 214 (289)
T 2g72_A 213 LI 214 (289)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 25
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.76 E-value=8.2e-18 Score=141.75 Aligned_cols=107 Identities=14% Similarity=0.225 Sum_probs=90.9
Q ss_pred HHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCC
Q 025059 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (258)
Q Consensus 25 i~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (258)
+....+++.+|||+|||+|.++..++..+. +++|+|+|+.+++.|+++.. ++.++++|+.+.++ ++
T Consensus 44 l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~-------~~ 109 (263)
T 3pfg_A 44 VRRHSPKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSL-------GR 109 (263)
T ss_dssp HHHHCTTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCC-------SC
T ss_pred HHhhCCCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCc-------cC
Confidence 344556779999999999999999987765 89999999999999998864 57899999977553 57
Q ss_pred ceeEEEecc-ccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 105 QADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 105 ~fD~V~~~~-~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
+||+|+|.. ++++ +.+.++...+++++.++|+|||.+++..
T Consensus 110 ~fD~v~~~~~~l~~-~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 110 RFSAVTCMFSSIGH-LAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp CEEEEEECTTGGGG-SCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CcCEEEEcCchhhh-cCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999999998 8887 3445788899999999999999999973
No 26
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.76 E-value=5.4e-18 Score=141.76 Aligned_cols=107 Identities=18% Similarity=0.154 Sum_probs=92.1
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||||||+|..+..++..+..+++|+|+|+.+++.|+++.... .++.++++|+...++ ++++||+|
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~------~~~~fD~v 162 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATL------PPNTYDLI 162 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCC------CSSCEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCC------CCCCeEEE
Confidence 468899999999999998887776668999999999999999987654 278999999876554 56799999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
++..++++ .+.++...+++++.++|+|||.+++..+
T Consensus 163 ~~~~~l~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 163 VIQWTAIY--LTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEESCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcchhhh--CCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 99999987 3457789999999999999999999865
No 27
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.76 E-value=3.3e-17 Score=134.26 Aligned_cols=110 Identities=18% Similarity=0.215 Sum_probs=90.8
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCC-CeEEEEecChhHHHHHHHHHHhcCCCc----eeEEEEcCCCCCchhhhhhhcCC
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNF----IAEFFEADPCAENFETQMQEKAN 104 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~ 104 (258)
.++.+|||+|||+|.++..++.... .+++|+|+|+.+++.|++++...+... ++.+.++|+...+. ..+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------~~~ 101 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDK------RFS 101 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCG------GGT
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccccc------ccC
Confidence 4678999999999999999987643 699999999999999999986554322 68999999866554 467
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
+||+|++..++++. ..+....+++++.++|+|||.++ ++++
T Consensus 102 ~fD~V~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~~i-~~~~ 142 (219)
T 3jwg_A 102 GYDAATVIEVIEHL--DENRLQAFEKVLFEFTRPQTVIV-STPN 142 (219)
T ss_dssp TCSEEEEESCGGGC--CHHHHHHHHHHHHTTTCCSEEEE-EEEB
T ss_pred CCCEEEEHHHHHhC--CHHHHHHHHHHHHHhhCCCEEEE-Eccc
Confidence 99999999999983 56677899999999999999554 4454
No 28
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.76 E-value=7.2e-18 Score=141.75 Aligned_cols=115 Identities=17% Similarity=0.127 Sum_probs=92.0
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCC----------------------------c
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKN----------------------------F 81 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~----------------------------~ 81 (258)
.++.+|||+|||+|..+..++..+..+++|+|+|+.|++.|+++....... .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 367899999999999988887766568999999999999999887653210 0
Q ss_pred ee-EEEEcCCCCCchhhhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 82 IA-EFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 82 ~~-~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
++ .+.++|+.+....... ..++||+|++.++++++..+.++...++.++.++|+|||.+++..
T Consensus 135 ~v~~~~~~d~~~~~~~~~~--~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGV--SLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HEEEEEECCTTSSSTTTTC--CCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hheeEEEeeeccCCCCCcc--ccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 26 8999998764321100 237999999999999766668889999999999999999999885
No 29
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.76 E-value=1.7e-17 Score=137.27 Aligned_cols=107 Identities=19% Similarity=0.264 Sum_probs=92.2
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.++.+|||+|||+|..+..++... ..+++|+|+|+.+++.|+++....+ ++.++++|+.+.++ .++||+
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~-------~~~fD~ 112 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDF-------EEKYDM 112 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCC-------CSCEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCC-------CCCceE
Confidence 367899999999999999998873 4599999999999999999986653 78999999977664 389999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|++..++++. +......+++++.++|+|||.+++..+.
T Consensus 113 v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 113 VVSALSIHHL--EDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp EEEESCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEeCccccC--CHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 9999999983 5666778999999999999999998644
No 30
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.76 E-value=1.8e-18 Score=145.50 Aligned_cols=155 Identities=17% Similarity=0.222 Sum_probs=119.7
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||+|||+|..+..++.....+++|+|+|+.+++.|+++.... .++.++++|+.+.++ ++++||+|
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~------~~~~fD~v 124 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEF------PENNFDLI 124 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCC------CTTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCC------CCCcEEEE
Confidence 477899999999999999998863349999999999999999887654 278999999987665 57899999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchH---HHHHHHHhHHhhhcCCCCCCCCCCCCcccCeeEEE
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSST---IWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVI 186 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i 186 (258)
++..++++ .+.++...+++++.++|+|||.+++..+.... ....+..
T Consensus 125 ~~~~~l~~--~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~---------------------------- 174 (266)
T 3ujc_A 125 YSRDAILA--LSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKE---------------------------- 174 (266)
T ss_dssp EEESCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHH----------------------------
T ss_pred eHHHHHHh--cChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHH----------------------------
Confidence 99999987 34588999999999999999999998654321 0000000
Q ss_pred EecccCCCCCCceeceEEEEccCccCCCccccchHHHHHHHHHcCcEEEEeCChhHHHH
Q 025059 187 TFEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLNEFYD 245 (258)
Q Consensus 187 ~f~~~~~~~~~~g~~y~~~l~~~~~~~~e~lv~~~~l~~~~~~~Gf~~~~~~~f~~~~~ 245 (258)
+ +... ...+.+.+.+.++++++||+.+....+...+.
T Consensus 175 ---------------~---~~~~----~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~ 211 (266)
T 3ujc_A 175 ---------------Y---VKQR----KYTLITVEEYADILTACNFKNVVSKDLSDYWN 211 (266)
T ss_dssp ---------------H---HHHH----TCCCCCHHHHHHHHHHTTCEEEEEEECHHHHH
T ss_pred ---------------H---HhcC----CCCCCCHHHHHHHHHHcCCeEEEEEeCCHHHH
Confidence 0 0000 01246789999999999999998887776554
No 31
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.76 E-value=1.1e-17 Score=136.85 Aligned_cols=109 Identities=17% Similarity=0.161 Sum_probs=92.7
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcC--CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
..++.+|||+|||+|..+..++... ..+++|+|+|+.+++.|+++....+.. ++.+.++|+.+.++ ++++|
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~------~~~~f 107 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPL------PDNTV 107 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSS------CSSCE
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCC------CCCCe
Confidence 4578899999999999999998874 359999999999999999998776543 68999999977665 57899
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|+|++..++++. .+...+++++.++|+|||.++++.+.
T Consensus 108 D~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~i~~~~ 145 (219)
T 3dh0_A 108 DFIFMAFTFHEL----SEPLKFLEELKRVAKPFAYLAIIDWK 145 (219)
T ss_dssp EEEEEESCGGGC----SSHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eEEEeehhhhhc----CCHHHHHHHHHHHhCCCeEEEEEEec
Confidence 999999999873 34678999999999999999987543
No 32
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.76 E-value=1.2e-17 Score=136.73 Aligned_cols=105 Identities=16% Similarity=0.105 Sum_probs=89.8
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++.. . ++.+.++|+.+.++ + ++||+|
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~-~----~~~~~~~d~~~~~~------~-~~fD~v 110 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP-K----EFSITEGDFLSFEV------P-TSIDTI 110 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC-T----TCCEESCCSSSCCC------C-SCCSEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC-C----ceEEEeCChhhcCC------C-CCeEEE
Confidence 4788999999999999999988755 99999999999999998876 1 67899999977655 4 899999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
++..++++ ........+++++.++|+|||.++++.+..
T Consensus 111 ~~~~~l~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 111 VSTYAFHH--LTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp EEESCGGG--SCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred EECcchhc--CChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 99999987 344555669999999999999999997654
No 33
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.75 E-value=2.6e-17 Score=141.11 Aligned_cols=110 Identities=12% Similarity=0.006 Sum_probs=94.0
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|..+..++.....+++|+|+|+.+++.|+++....+...++.+.++|+.+.++ ++++||+
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~fD~ 153 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC------EDNSYDF 153 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS------CTTCEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCC------CCCCEeE
Confidence 3578999999999999999988762339999999999999999998776554479999999987766 5789999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|++..++++.- +...+++++.++|+|||.++++.+.
T Consensus 154 v~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 154 IWSQDAFLHSP----DKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp EEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEecchhhhcC----CHHHHHHHHHHHcCCCeEEEEEEec
Confidence 99999988742 2688999999999999999998654
No 34
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.75 E-value=1.8e-17 Score=143.36 Aligned_cols=109 Identities=16% Similarity=0.117 Sum_probs=94.3
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||+|||+|..+..++.....+++|+|+|+.+++.|+++....+...++.++++|+.+.++ ++++||+|
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~~fD~V 189 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPF------DKGAVTAS 189 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC------CTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCC------CCCCEeEE
Confidence 478899999999999999998872348999999999999999999877655579999999987665 57899999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
++..++++. . ...+++++.++|+|||.+++..+..
T Consensus 190 ~~~~~l~~~-~----~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 190 WNNESTMYV-D----LHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp EEESCGGGS-C----HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EECCchhhC-C----HHHHHHHHHHHcCCCcEEEEEEccc
Confidence 999999873 2 8899999999999999999886543
No 35
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.75 E-value=7.1e-17 Score=133.93 Aligned_cols=115 Identities=17% Similarity=0.237 Sum_probs=96.0
Q ss_pred HHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 26 ~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
...++++.+|||+|||+|..+..++.. .+++|+|+|+.+++.|+++....+ .++.+.++|+.+.++ .++
T Consensus 28 ~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~-------~~~ 96 (243)
T 3d2l_A 28 LEQVEPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELEL-------PEP 96 (243)
T ss_dssp HHHSCTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCC-------SSC
T ss_pred HHHcCCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCC-------CCC
Confidence 345677899999999999999888776 599999999999999999887653 268999999866543 378
Q ss_pred eeEEEecc-ccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHH
Q 025059 106 ADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (258)
Q Consensus 106 fD~V~~~~-~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~ 152 (258)
||+|++.. ++++ +.+.++...+++++.++|+|||.+++.+++...+
T Consensus 97 fD~v~~~~~~~~~-~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 143 (243)
T 3d2l_A 97 VDAITILCDSLNY-LQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKM 143 (243)
T ss_dssp EEEEEECTTGGGG-CCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHH
T ss_pred cCEEEEeCCchhh-cCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHH
Confidence 99999986 7776 3457888999999999999999999998886543
No 36
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.74 E-value=1.4e-17 Score=137.94 Aligned_cols=107 Identities=21% Similarity=0.274 Sum_probs=88.8
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++....+...++.++++|+.+.+ +.++||+|+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~~~fD~v~ 137 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-------PTELFDLIF 137 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-------CSSCEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-------CCCCeeEEE
Confidence 456999999999999988866444 899999999999999999876433347999999997744 356999999
Q ss_pred eccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
+..++++. +.++...+++++.++|+|||.+++...
T Consensus 138 ~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 138 DYVFFCAI--EPEMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp EESSTTTS--CGGGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EChhhhcC--CHHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 99988873 455788999999999999999988643
No 37
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.74 E-value=5.8e-17 Score=134.85 Aligned_cols=109 Identities=18% Similarity=0.244 Sum_probs=92.0
Q ss_pred hcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 28 YSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
-..++.+|||+|||+|..+..++.... +++|+|+|+.+++.|+++....+.. ++.+.++|+...++ ++++||
T Consensus 18 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~------~~~~fD 89 (239)
T 1xxl_A 18 ECRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESLPF------PDDSFD 89 (239)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBCCS------CTTCEE
T ss_pred CcCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccCCC------CCCcEE
Confidence 345789999999999999998877765 9999999999999999988765432 68999999877665 568999
Q ss_pred EEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
+|++..++++. .+...++.++.++|+|||.+++..+.
T Consensus 90 ~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 90 IITCRYAAHHF----SDVRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp EEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEECCchhhc----cCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 99999988873 24678999999999999999997543
No 38
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.74 E-value=6.8e-18 Score=140.43 Aligned_cols=144 Identities=19% Similarity=0.225 Sum_probs=110.6
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCC--chhhhhhhcCCcee
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE--NFETQMQEKANQAD 107 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~fD 107 (258)
+++.+|||||||+|.++..++..+. +++|+|+|+.+++.|+++ +.++++|+.+. ++ ++++||
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~------~~~~fD 103 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSL------PDKYLD 103 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTS------CTTCBS
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhc------CCCCee
Confidence 4778999999999999998888765 899999999999998765 46777876432 22 568999
Q ss_pred EEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHHHHHHHHhHHhhhcCCCCCCCCCCCCcccCeeEEEE
Q 025059 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVIT 187 (258)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~ 187 (258)
+|++..+++++ ..++...+++++.++|+|||.+++.+++..........
T Consensus 104 ~i~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~----------------------------- 152 (240)
T 3dli_A 104 GVMISHFVEHL--DPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINF----------------------------- 152 (240)
T ss_dssp EEEEESCGGGS--CGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHH-----------------------------
T ss_pred EEEECCchhhC--CcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHH-----------------------------
Confidence 99999999873 34567899999999999999999998886544322110
Q ss_pred ecccCCCCCCceeceEEEEccCccCCCccccchHHHHHHHHHcCcEEEEeCChh
Q 025059 188 FEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLN 241 (258)
Q Consensus 188 f~~~~~~~~~~g~~y~~~l~~~~~~~~e~lv~~~~l~~~~~~~Gf~~~~~~~f~ 241 (258)
| ... ...+..+++.+.++++++||+.+....+.
T Consensus 153 --------------~---~~~----~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 153 --------------Y---IDP----THKKPVHPETLKFILEYLGFRDVKIEFFE 185 (240)
T ss_dssp --------------T---TST----TCCSCCCHHHHHHHHHHHTCEEEEEEEEC
T ss_pred --------------h---cCc----cccccCCHHHHHHHHHHCCCeEEEEEEec
Confidence 0 000 01135678999999999999998776654
No 39
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.74 E-value=2.9e-17 Score=136.31 Aligned_cols=105 Identities=23% Similarity=0.256 Sum_probs=90.6
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++.... ++.+.++|+...++ ++++||+|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~d~~~~~~------~~~~fD~v~ 112 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDT----GITYERADLDKLHL------PQDSFDLAY 112 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSS----SEEEEECCGGGCCC------CTTCEEEEE
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccC----CceEEEcChhhccC------CCCCceEEE
Confidence 78899999999999999998876559999999999999999887543 68999999866554 568999999
Q ss_pred eccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+..++++. ++...+++++.++|+|||.++++.++.
T Consensus 113 ~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~~ 147 (243)
T 3bkw_A 113 SSLALHYV----EDVARLFRTVHQALSPGGHFVFSTEHP 147 (243)
T ss_dssp EESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred Eecccccc----chHHHHHHHHHHhcCcCcEEEEEeCCc
Confidence 99988873 246789999999999999999998875
No 40
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.73 E-value=2.1e-17 Score=134.46 Aligned_cols=124 Identities=18% Similarity=0.209 Sum_probs=102.1
Q ss_pred HHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcC
Q 025059 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (258)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (258)
++..++.++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++.... .++.+.++|+.+.++ ++
T Consensus 35 ~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~---~~i~~~~~d~~~~~~------~~ 105 (215)
T 2pxx_A 35 LLEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV---PQLRWETMDVRKLDF------PS 105 (215)
T ss_dssp HHGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC---TTCEEEECCTTSCCS------CS
T ss_pred HHHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC---CCcEEEEcchhcCCC------CC
Confidence 344556788999999999999999998887668999999999999999987642 268999999877655 56
Q ss_pred CceeEEEecccccccc-----------CCHHHHHHHHHHHHhcccCCcEEEEEEcCchHHHHHH
Q 025059 104 NQADLVCCFQHLQMCF-----------ETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKY 156 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~-----------~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~~~~ 156 (258)
++||+|++..+++++. .+......+++++.++|+|||.+++..++.......+
T Consensus 106 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~ 169 (215)
T 2pxx_A 106 ASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPHFRTRH 169 (215)
T ss_dssp SCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHHHHHHH
T ss_pred CcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcHHHHHH
Confidence 8999999988876643 2256789999999999999999999999886655443
No 41
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.73 E-value=1e-16 Score=138.76 Aligned_cols=109 Identities=15% Similarity=0.205 Sum_probs=92.1
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
..++.+|||+|||+|..+..++.. +. +++|+|+|+.+++.|+++....+...++.+.++|+.+ + +++||
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~-------~~~fD 157 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED--F-------AEPVD 157 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG--C-------CCCCS
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH--C-------CCCcC
Confidence 357889999999999999988877 55 9999999999999999998876554468999999743 2 37899
Q ss_pred EEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+|++..+++++ +.++...+++++.++|+|||.+++..+..
T Consensus 158 ~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 158 RIVSIEAFEHF--GHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp EEEEESCGGGT--CGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred EEEEeChHHhc--CHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 99999988873 33668899999999999999999987654
No 42
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.73 E-value=8.8e-17 Score=138.58 Aligned_cols=115 Identities=16% Similarity=0.136 Sum_probs=96.2
Q ss_pred HHhcCCCCEEEEEcCCCCccHHHHH--HcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcC
Q 025059 26 KIYSHPYVTVCDLYCGAGVDVDKWE--TALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (258)
Q Consensus 26 ~~~~~~~~~VLDlGcG~G~~~~~~~--~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (258)
....+++.+|||||||+|..+..++ ..+..+++|+|+|+.+++.|+++....+...++.++++|+.+.++ +
T Consensus 113 ~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~- 185 (305)
T 3ocj_A 113 QRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT------R- 185 (305)
T ss_dssp HHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC------C-
T ss_pred HhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc------c-
Confidence 5556789999999999999888874 334569999999999999999999876554469999999877554 4
Q ss_pred CceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
++||+|++..++++ +.+......+++++.++|+|||.+++....
T Consensus 186 ~~fD~v~~~~~~~~-~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 186 EGYDLLTSNGLNIY-EPDDARVTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp SCEEEEECCSSGGG-CCCHHHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred CCeEEEEECChhhh-cCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 89999999998886 445777778999999999999999998544
No 43
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.73 E-value=2.9e-17 Score=133.85 Aligned_cols=103 Identities=18% Similarity=0.137 Sum_probs=88.0
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
++++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++. ++.+.++|+...+ .+++||+
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~-------~~~~fD~ 105 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD-------AIDAYDA 105 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC-------CCSCEEE
T ss_pred cCCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC-------CCCcEEE
Confidence 45788999999999999999988765 9999999999999999887 3467788875543 3689999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|++..++++ ...++...+++++.++|+|||.++++.+.
T Consensus 106 v~~~~~l~~--~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 106 VWAHACLLH--VPRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp EEECSCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEecCchhh--cCHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 999999987 34678899999999999999999998654
No 44
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.73 E-value=1.3e-17 Score=138.91 Aligned_cols=109 Identities=12% Similarity=0.094 Sum_probs=91.1
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
++.+|||||||+|..+..++.....+++|+|+|+.+++.|+++....+ ..++.++++|+...++ ++++||+|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~------~~~~fD~v~ 151 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTP------EPDSYDVIW 151 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCC------CSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCC------CCCCEEEEE
Confidence 578999999999999988877766699999999999999999887642 2268899999866554 456899999
Q ss_pred eccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
+..++++ ...+....+++++.++|+|||.++++.+.
T Consensus 152 ~~~~l~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 152 IQWVIGH--LTDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp EESCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred Ecchhhh--CCHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 9999887 34556789999999999999999997554
No 45
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.72 E-value=7.9e-17 Score=131.39 Aligned_cols=106 Identities=20% Similarity=0.129 Sum_probs=89.9
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.+++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|++ ... .++.++++|+.+. + ++++||+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~--~~~---~~~~~~~~d~~~~-~------~~~~~D~ 110 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR--HGL---DNVEFRQQDLFDW-T------PDRQWDA 110 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG--GCC---TTEEEEECCTTSC-C------CSSCEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh--cCC---CCeEEEecccccC-C------CCCceeE
Confidence 34678999999999999999988855 99999999999999987 111 2689999998765 3 5789999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
|++..++++ ...+....+++++.++|+|||.+++..++.
T Consensus 111 v~~~~~l~~--~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 111 VFFAHWLAH--VPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp EEEESCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EEEechhhc--CCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 999999987 345667899999999999999999997765
No 46
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.72 E-value=1.6e-16 Score=130.06 Aligned_cols=110 Identities=14% Similarity=0.154 Sum_probs=91.1
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCC-CeEEEEecChhHHHHHHHHHHhcCCCc----eeEEEEcCCCCCchhhhhhhcCC
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNF----IAEFFEADPCAENFETQMQEKAN 104 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~ 104 (258)
.++.+|||+|||+|.++..++..+. .+++|+|+|+.+++.|++++...+... ++.+.++|+...+. ..+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------~~~ 101 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK------RFH 101 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG------GGC
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc------cCC
Confidence 4678999999999999999988643 599999999999999999987554332 68999999865544 457
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
+||+|++..+++++ +.+....+++++.++|+|||.++++ ++
T Consensus 102 ~fD~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~li~~-~~ 142 (217)
T 3jwh_A 102 GYDAATVIEVIEHL--DLSRLGAFERVLFEFAQPKIVIVTT-PN 142 (217)
T ss_dssp SCSEEEEESCGGGC--CHHHHHHHHHHHHTTTCCSEEEEEE-EB
T ss_pred CcCEEeeHHHHHcC--CHHHHHHHHHHHHHHcCCCEEEEEc-cC
Confidence 99999999999983 5677899999999999999965554 44
No 47
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.72 E-value=1.1e-16 Score=129.35 Aligned_cols=107 Identities=14% Similarity=0.106 Sum_probs=90.8
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.+++ +|||+|||+|..+..++..+. +++|+|+|+.+++.|+++....+. ++.+.++|+.+.++ ++++||+
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~------~~~~fD~ 97 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDI------VADAWEG 97 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSC------CTTTCSE
T ss_pred CCCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCC------CcCCccE
Confidence 4667 999999999999988887765 999999999999999999876643 78999999877654 5689999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
|++.+ .| .+.++...++.++.++|+|||.+++..++.
T Consensus 98 v~~~~-~~---~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 98 IVSIF-CH---LPSSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp EEEEC-CC---CCHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred EEEEh-hc---CCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 99854 22 257789999999999999999999997765
No 48
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.71 E-value=3.1e-17 Score=137.92 Aligned_cols=107 Identities=13% Similarity=0.085 Sum_probs=87.8
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHh----------c------CCCceeEEEEcCCCCC
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWEN----------Q------RKNFIAEFFEADPCAE 93 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~----------~------~~~~~~~~~~~d~~~~ 93 (258)
.++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.|+++... . ....++.++++|+.+.
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 4788999999999999999988877 999999999999999877631 0 0123789999999775
Q ss_pred chhhhhhhc-CCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 94 NFETQMQEK-ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 94 ~~~~~~~~~-~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+. . .++||+|++..+++++ +.+....+++++.++|||||.+++.
T Consensus 146 ~~------~~~~~FD~V~~~~~l~~l--~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 146 PR------ANIGKFDRIWDRGALVAI--NPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GG------GCCCCEEEEEESSSTTTS--CGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred Cc------ccCCCEEEEEEhhhhhhC--CHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 54 3 3799999998888763 4556778999999999999999755
No 49
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.71 E-value=8.5e-17 Score=131.43 Aligned_cols=108 Identities=20% Similarity=0.228 Sum_probs=93.4
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++..... ++.++++|+.+.+ ++++||+|+
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~-------~~~~fD~v~ 119 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFS-------TAELFDLIV 119 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCC-------CSCCEEEEE
T ss_pred CCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCC-------CCCCccEEE
Confidence 568999999999999999987764 99999999999999999887643 7899999987654 368999999
Q ss_pred eccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
+..++++ +.+.+....+++++.++|+|||.++++++...
T Consensus 120 ~~~~l~~-~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 158 (216)
T 3ofk_A 120 VAEVLYY-LEDMTQMRTAIDNMVKMLAPGGHLVFGSARDA 158 (216)
T ss_dssp EESCGGG-SSSHHHHHHHHHHHHHTEEEEEEEEEEEECHH
T ss_pred EccHHHh-CCCHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 9999987 45567788999999999999999999877654
No 50
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.71 E-value=2.5e-16 Score=130.28 Aligned_cols=110 Identities=15% Similarity=0.229 Sum_probs=90.8
Q ss_pred HHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCC
Q 025059 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (258)
Q Consensus 25 i~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (258)
+..+.+++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++.. ++.+.++|+.+.++ ++
T Consensus 34 l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~------~~~~~~~d~~~~~~-------~~ 99 (239)
T 3bxo_A 34 VRSRTPEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRLP------DATLHQGDMRDFRL-------GR 99 (239)
T ss_dssp HHHHCTTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHCT------TCEEEECCTTTCCC-------SS
T ss_pred HHHhcCCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhCC------CCEEEECCHHHccc-------CC
Confidence 344457789999999999999999988765 89999999999999988752 57899999876543 56
Q ss_pred ceeEEEecc-ccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 105 QADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 105 ~fD~V~~~~-~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+||+|+|.+ ++++ +.+.++...+++++.++|+|||.+++..+..
T Consensus 100 ~~D~v~~~~~~~~~-~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 100 KFSAVVSMFSSVGY-LKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp CEEEEEECTTGGGG-CCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred CCcEEEEcCchHhh-cCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 899999755 6765 4456788999999999999999999986544
No 51
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.71 E-value=1.7e-16 Score=134.97 Aligned_cols=102 Identities=25% Similarity=0.282 Sum_probs=87.2
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||||||+|..+..++.. ..+++|+|+|+.|++.|+++.. ++.+.++|+...++ +++||+|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~-------~~~fD~v 121 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQS-GAEVLGTDNAATMIEKARQNYP------HLHFDVADARNFRV-------DKPLDAV 121 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCT------TSCEEECCTTTCCC-------SSCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHhhCC------CCEEEECChhhCCc-------CCCcCEE
Confidence 47789999999999999999884 4599999999999999988762 57899999877553 4789999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
++..++++.- +...+++++.++|+|||.+++..++.
T Consensus 122 ~~~~~l~~~~----d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 122 FSNAMLHWVK----EPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp EEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EEcchhhhCc----CHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 9999998742 36789999999999999999998765
No 52
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.71 E-value=2.2e-16 Score=134.71 Aligned_cols=106 Identities=24% Similarity=0.333 Sum_probs=91.2
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc-C-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
.++.+|||+|||+|..+..++.. + ..+++|+|+|+.+++.|+++....+. ++.+.++|+.+.++ +++||
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~-------~~~fD 91 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIEL-------NDKYD 91 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCC-------SSCEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCc-------CCCee
Confidence 47899999999999999998776 2 35999999999999999999876643 79999999987554 46999
Q ss_pred EEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
+|++..++++. .+...+++++.++|+|||.+++..|+
T Consensus 92 ~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 92 IAICHAFLLHM----TTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEEESCGGGC----SSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECChhhcC----CCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 99999988873 33578999999999999999999888
No 53
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.71 E-value=6.7e-17 Score=136.98 Aligned_cols=108 Identities=22% Similarity=0.314 Sum_probs=92.1
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
+++.+|||||||+|..+..++... ..+++|+|+|+.+++.|+++....+.. ++.+.++|+...++ ++++||+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~------~~~~fD~ 108 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPF------EDSSFDH 108 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCS------CTTCEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCC------CCCCeeE
Confidence 578999999999999999998874 459999999999999999998776543 68999999876655 5789999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|++..++++. .+...+++++.++|+|||.+++..++
T Consensus 109 v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 109 IFVCFVLEHL----QSPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp EEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEechhhhc----CCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 9999988873 23558999999999999999998654
No 54
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.70 E-value=4.3e-16 Score=127.91 Aligned_cols=114 Identities=23% Similarity=0.276 Sum_probs=96.3
Q ss_pred HHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 26 ~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
...++++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++....+ .++.++++|+.+.++ ++++
T Consensus 33 ~~~~~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~------~~~~ 103 (227)
T 1ve3_A 33 MKYMKKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSF------EDKT 103 (227)
T ss_dssp HHSCCSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCS------CTTC
T ss_pred HHhcCCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCC------CCCc
Confidence 34556789999999999999988888766 99999999999999999887654 278999999877554 5679
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
||+|++..++++ .+..+...+++++.++|+|||.+++..++..
T Consensus 104 ~D~v~~~~~~~~--~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 146 (227)
T 1ve3_A 104 FDYVIFIDSIVH--FEPLELNQVFKEVRRVLKPSGKFIMYFTDLR 146 (227)
T ss_dssp EEEEEEESCGGG--CCHHHHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred EEEEEEcCchHh--CCHHHHHHHHHHHHHHcCCCcEEEEEecChH
Confidence 999999987554 4577889999999999999999999988754
No 55
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.70 E-value=8e-17 Score=134.86 Aligned_cols=109 Identities=20% Similarity=0.227 Sum_probs=91.9
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|..+..++.....+++|+|+|+.+++.|+++....+...++.+.++|+.+.++ +++||+
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~fD~ 106 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-------NEKCDV 106 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-------SSCEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-------CCCCCE
Confidence 4588999999999999999888764458999999999999999998876554479999999876543 578999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|++..++++. .+...+++++.++|||||.+++..+.
T Consensus 107 V~~~~~~~~~----~~~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 107 AACVGATWIA----GGFAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp EEEESCGGGT----SSSHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred EEECCChHhc----CCHHHHHHHHHHHcCCCeEEEEecCc
Confidence 9999988863 24678999999999999999998653
No 56
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.70 E-value=1.9e-16 Score=132.35 Aligned_cols=120 Identities=27% Similarity=0.370 Sum_probs=95.1
Q ss_pred HHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh
Q 025059 18 EFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET 97 (258)
Q Consensus 18 ~~~k~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 97 (258)
.|+...+-....+++.+|||+|||+|..+..++..+. +++|+|+|+.|++.|+++....+. ++.++++|+.+.++
T Consensus 28 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~-- 102 (252)
T 1wzn_A 28 DFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAF-- 102 (252)
T ss_dssp HHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCC--
T ss_pred HHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhccc--
Confidence 4444443222234678999999999999999988765 999999999999999999876543 68999999866543
Q ss_pred hhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 98 QMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 98 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
.++||+|+|.++.... .+.++...+++++.++|+|||.+++..++
T Consensus 103 -----~~~fD~v~~~~~~~~~-~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 103 -----KNEFDAVTMFFSTIMY-FDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp -----CSCEEEEEECSSGGGG-SCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----CCCccEEEEcCCchhc-CCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 4689999987544332 35778899999999999999999998876
No 57
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.70 E-value=4.1e-16 Score=130.83 Aligned_cols=107 Identities=17% Similarity=0.133 Sum_probs=89.5
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|..+..++..+ .+++|+|+|+.+++.|+++.... ..++.+.++|+.+.++ ++++||+
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~~d~~~~~~------~~~~fD~ 107 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIARG-YRYIALDADAAMLEVFRQKIAGV--DRKVQVVQADARAIPL------PDESVHG 107 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTTT-CEEEEEESCHHHHHHHHHHTTTS--CTTEEEEESCTTSCCS------CTTCEEE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhcc--CCceEEEEcccccCCC------CCCCeeE
Confidence 4578899999999999999998775 49999999999999999987221 2278999999977665 5789999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|++..++|+. .+...++.++.++|+|||.+++..+.
T Consensus 108 v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (263)
T 2yqz_A 108 VIVVHLWHLV----PDWPKVLAEAIRVLKPGGALLEGWDQ 143 (263)
T ss_dssp EEEESCGGGC----TTHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEECCchhhc----CCHHHHHHHHHHHCCCCcEEEEEecC
Confidence 9999999873 24678999999999999999988443
No 58
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.70 E-value=1.1e-15 Score=129.40 Aligned_cols=110 Identities=13% Similarity=0.020 Sum_probs=87.2
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-CC-CeEEEEecChh------HHHHHHHHHHhcCCCceeEEEEcC-C--CCCchhh
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-LI-ANYIGIDVATS------GIGEARDTWENQRKNFIAEFFEAD-P--CAENFET 97 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~~-~~v~gvD~s~~------~l~~a~~~~~~~~~~~~~~~~~~d-~--~~~~~~~ 97 (258)
..++.+|||||||+|..+..++.. +. .+++|+|+|+. +++.|++++...+...++.+.++| . ...++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-- 118 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPI-- 118 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGG--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCC--
Confidence 568899999999999999998876 33 59999999997 999999998876544479999998 3 22233
Q ss_pred hhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 98 QMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 98 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
++++||+|++..++++. ... ..+++.+.++++|||.+++....
T Consensus 119 ----~~~~fD~v~~~~~l~~~-~~~---~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 119 ----ADQHFDRVVLAHSLWYF-ASA---NALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp ----TTCCCSEEEEESCGGGS-SCH---HHHHHHHHHHTTTCSEEEEEEEC
T ss_pred ----CCCCEEEEEEccchhhC-CCH---HHHHHHHHHHhCCCCEEEEEEec
Confidence 46899999999999873 333 34777778888889999998543
No 59
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.70 E-value=4.4e-17 Score=135.29 Aligned_cols=113 Identities=16% Similarity=0.007 Sum_probs=89.6
Q ss_pred HHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCC--chhhhhhhcC
Q 025059 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE--NFETQMQEKA 103 (258)
Q Consensus 26 ~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~ 103 (258)
.....++.+|||||||+|..+..++..+..+++|+|+|+.|++.|+++....+ .++.++++|+.+. ++ ++
T Consensus 55 ~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~------~~ 126 (236)
T 1zx0_A 55 AAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTL------PD 126 (236)
T ss_dssp HHHTTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGS------CT
T ss_pred hhcCCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhccc------CC
Confidence 33456788999999999999998876666689999999999999999887654 3789999997553 33 56
Q ss_pred CceeEEEe-ccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 104 NQADLVCC-FQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 104 ~~fD~V~~-~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
++||+|++ .+.++...........+++++.++|||||++++..
T Consensus 127 ~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 127 GHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp TCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred CceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 89999999 66543222345567788999999999999998763
No 60
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.69 E-value=9.1e-17 Score=131.86 Aligned_cols=110 Identities=20% Similarity=0.267 Sum_probs=88.8
Q ss_pred HHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCC--Cchhhhhhh
Q 025059 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA--ENFETQMQE 101 (258)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~ 101 (258)
++.....++.+|||+|||+|..+..++..+ .+++|+|+|+.+++.++++. ..+.++|+.+ .++
T Consensus 25 l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~------ 89 (230)
T 3cc8_A 25 LLKHIKKEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPY------ 89 (230)
T ss_dssp HHTTCCTTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCS------
T ss_pred HHHHhccCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCC------
Confidence 333333578999999999999999988875 69999999999999988654 2678899865 333
Q ss_pred cCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHH
Q 025059 102 KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (258)
Q Consensus 102 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~ 152 (258)
++++||+|++..++++.- +...++.++.++|+|||.++++.|+....
T Consensus 90 ~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~~gG~l~~~~~~~~~~ 136 (230)
T 3cc8_A 90 EEEQFDCVIFGDVLEHLF----DPWAVIEKVKPYIKQNGVILASIPNVSHI 136 (230)
T ss_dssp CTTCEEEEEEESCGGGSS----CHHHHHHHTGGGEEEEEEEEEEEECTTSH
T ss_pred CCCccCEEEECChhhhcC----CHHHHHHHHHHHcCCCCEEEEEeCCcchH
Confidence 467999999999888732 34689999999999999999999887543
No 61
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.69 E-value=3.9e-16 Score=133.73 Aligned_cols=114 Identities=13% Similarity=0.124 Sum_probs=79.0
Q ss_pred CCCCEEEEEcCCCCccHHH----HHHc-CCCe--EEEEecChhHHHHHHHHHHhcC-C-CceeEEEEcCCCCCchhhhh-
Q 025059 30 HPYVTVCDLYCGAGVDVDK----WETA-LIAN--YIGIDVATSGIGEARDTWENQR-K-NFIAEFFEADPCAENFETQM- 99 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~----~~~~-~~~~--v~gvD~s~~~l~~a~~~~~~~~-~-~~~~~~~~~d~~~~~~~~~~- 99 (258)
.++.+|||||||+|..+.. +... +... ++|+|+|+.|++.|+++..... . ...+.+.++++. ++...+
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~ 128 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSS--EYQSRML 128 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHH--HHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchh--hhhhhhc
Confidence 3567999999999975443 3232 2333 4999999999999999986431 1 112334444432 221000
Q ss_pred -hhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 100 -QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 100 -~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+.++++||+|++..++|+. ++...+++++.++|||||.+++..++.
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~----~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYV----KDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGC----SCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred cccCCCceeEEEEeeeeeec----CCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 0136899999999999983 347789999999999999999986654
No 62
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.69 E-value=3.5e-16 Score=126.92 Aligned_cols=112 Identities=15% Similarity=0.109 Sum_probs=91.8
Q ss_pred hcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 28 YSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
...++.+|||+|||+|..+..++.....+++|+|+|+.+++.|+++....+. ++.+.++|+.+.++ ++++||
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~------~~~~fD 91 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNF--KLNISKGDIRKLPF------KDESMS 91 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTC--CCCEEECCTTSCCS------CTTCEE
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEECchhhCCC------CCCcee
Confidence 3456889999999999885444444444999999999999999998876532 68899999977665 568999
Q ss_pred EEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+|++..++++. +.++...+++++.++|+|||.+++..++.
T Consensus 92 ~v~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 92 FVYSYGTIFHM--RKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp EEEECSCGGGS--CHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred EEEEcChHHhC--CHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 99999888873 46789999999999999999999986653
No 63
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.69 E-value=2.4e-16 Score=135.33 Aligned_cols=112 Identities=13% Similarity=0.113 Sum_probs=90.7
Q ss_pred cCCCCEEEEEcCCCCccHHHHHH--cCCCeEEEEecChhHHHHHHHHHHhc-CCCceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWET--ALIANYIGIDVATSGIGEARDTWENQ-RKNFIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~--~~~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
..++.+|||||||+|..+..++. .+..+++|+|+|+.+++.|+++.... +...++.++++|+.+.++........++
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 45789999999999999999986 35669999999999999999998765 2233799999999876652100001279
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
||+|++..++|+. +...+++++.++|+|||.+++.
T Consensus 114 fD~V~~~~~l~~~-----~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 114 IDMITAVECAHWF-----DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp EEEEEEESCGGGS-----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred eeEEeHhhHHHHh-----CHHHHHHHHHHhcCCCcEEEEE
Confidence 9999999999984 5789999999999999999883
No 64
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.69 E-value=2.3e-16 Score=125.81 Aligned_cols=124 Identities=10% Similarity=0.034 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchh
Q 025059 17 YEFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE 96 (258)
Q Consensus 17 ~~~~k~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 96 (258)
..++.. ++....+++.+|||+|||+|..+..++.. ..+|+|+|+|+.|++.|+++....+. .++.+++.|.....-
T Consensus 9 ~~~~~~-~l~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~- 84 (185)
T 3mti_A 9 IHMSHD-FLAEVLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDH- 84 (185)
T ss_dssp HHHHHH-HHHTTCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGG-
T ss_pred HHHHHH-HHHHhCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHh-
Confidence 344443 34556778999999999999999999887 55999999999999999999987654 378898866543210
Q ss_pred hhhhhcCCceeEEEecccccc-----ccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 97 TQMQEKANQADLVCCFQHLQM-----CFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 97 ~~~~~~~~~fD~V~~~~~l~~-----~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
. .+++||+|++...... ..........+++++.++|+|||.+++....
T Consensus 85 --~--~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 85 --Y--VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp --T--CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred --h--ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 1 3678999987632111 1113466778999999999999999988654
No 65
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.68 E-value=5.7e-16 Score=124.20 Aligned_cols=125 Identities=13% Similarity=0.007 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchh
Q 025059 17 YEFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE 96 (258)
Q Consensus 17 ~~~~k~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 96 (258)
..++...+......++.+|||+|||+|..+..++..+..+++|+|+|+.|++.|+++....+. .+++++++|+.+...
T Consensus 30 ~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~- 107 (189)
T 3p9n_A 30 RESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVA- 107 (189)
T ss_dssp HHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHH-
T ss_pred HHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHh-
Confidence 344443433322347889999999999999988777777899999999999999999887654 378999999744211
Q ss_pred hhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHh--cccCCcEEEEEEcCc
Q 025059 97 TQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSS--LLKPGGYFLGITPDS 149 (258)
Q Consensus 97 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~--~LkpgG~~i~~~~~~ 149 (258)
.. ++++||+|++....+. ..+....++..+.+ +|+|||.+++..+..
T Consensus 108 -~~--~~~~fD~i~~~~p~~~---~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 108 -AG--TTSPVDLVLADPPYNV---DSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp -HC--CSSCCSEEEECCCTTS---CHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred -hc--cCCCccEEEECCCCCc---chhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 11 3679999999876554 35778899999999 999999999987654
No 66
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.68 E-value=1.8e-16 Score=129.07 Aligned_cols=114 Identities=20% Similarity=0.279 Sum_probs=93.8
Q ss_pred HHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhc
Q 025059 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (258)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (258)
.++....+++.+|||+|||+|..+..+ +..+++|+|+|+.+++.|+++. . ++.+.++|+.+.++ +
T Consensus 28 ~~l~~~~~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~--~----~~~~~~~d~~~~~~------~ 92 (211)
T 2gs9_A 28 RALKGLLPPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA--P----EATWVRAWGEALPF------P 92 (211)
T ss_dssp HHHHTTCCCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC--T----TSEEECCCTTSCCS------C
T ss_pred HHHHHhcCCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC--C----CcEEEEcccccCCC------C
Confidence 345566668899999999999887766 4348999999999999999887 1 67899999877665 5
Q ss_pred CCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHHHHH
Q 025059 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAK 155 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~~~ 155 (258)
+++||+|++..++++. ++...+++++.++|+|||.++++.++....+..
T Consensus 93 ~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~ 141 (211)
T 2gs9_A 93 GESFDVVLLFTTLEFV----EDVERVLLEARRVLRPGGALVVGVLEALSPWAA 141 (211)
T ss_dssp SSCEEEEEEESCTTTC----SCHHHHHHHHHHHEEEEEEEEEEEECTTSHHHH
T ss_pred CCcEEEEEEcChhhhc----CCHHHHHHHHHHHcCCCCEEEEEecCCcCcHHH
Confidence 7899999999988873 246789999999999999999998887655443
No 67
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.68 E-value=1.2e-16 Score=142.18 Aligned_cols=110 Identities=21% Similarity=0.188 Sum_probs=90.4
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhc-----C--CCceeEEEEcCCCCC------
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQ-----R--KNFIAEFFEADPCAE------ 93 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~-----~--~~~~~~~~~~d~~~~------ 93 (258)
..++.+|||||||+|..+..++.. +..+++|+|+|+.+++.|+++.... + ...++.++++|+.+.
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 347889999999999999888776 3459999999999999999887543 1 112799999999775
Q ss_pred chhhhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 94 NFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 94 ~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
++ ++++||+|++..++++. .+...+++++.++|||||.+++..+.
T Consensus 161 ~~------~~~~fD~V~~~~~l~~~----~d~~~~l~~~~r~LkpgG~l~i~~~~ 205 (383)
T 4fsd_A 161 GV------PDSSVDIVISNCVCNLS----TNKLALFKEIHRVLRDGGELYFSDVY 205 (383)
T ss_dssp CC------CTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CC------CCCCEEEEEEccchhcC----CCHHHHHHHHHHHcCCCCEEEEEEec
Confidence 44 57899999999999873 23679999999999999999998544
No 68
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.68 E-value=3.2e-16 Score=128.60 Aligned_cols=147 Identities=16% Similarity=0.199 Sum_probs=108.5
Q ss_pred HHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCC
Q 025059 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (258)
Q Consensus 25 i~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (258)
+....+ +.+|||+|||+|..+..++.. +|+|+|+.+++.|+++ ++.+.++|+...++ +++
T Consensus 42 l~~~~~-~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~------~~~ 101 (219)
T 1vlm_A 42 VKCLLP-EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR--------GVFVLKGTAENLPL------KDE 101 (219)
T ss_dssp HHHHCC-SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCS------CTT
T ss_pred HHHhCC-CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc--------CCEEEEcccccCCC------CCC
Confidence 334444 889999999999998877543 9999999999999876 46789999876554 567
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHHHHHHHHhHHhhhcCCCCCCCCCCCCcccCeeE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESY 184 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 184 (258)
+||+|++..++++. ++...+++++.++|+|||.++++.++............ . . +.
T Consensus 102 ~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~----~-~--------~~------- 157 (219)
T 1vlm_A 102 SFDFALMVTTICFV----DDPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKN----K-E--------KS------- 157 (219)
T ss_dssp CEEEEEEESCGGGS----SCHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHT----T-T--------C--------
T ss_pred CeeEEEEcchHhhc----cCHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHH----h-c--------Cc-------
Confidence 99999999988873 34578999999999999999999887654433322110 0 0 00
Q ss_pred EEEecccCCCCCCceeceEEEEccCccCCCccccchHHHHHHHHHcCcEEEEeCCh
Q 025059 185 VITFEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNL 240 (258)
Q Consensus 185 ~i~f~~~~~~~~~~g~~y~~~l~~~~~~~~e~lv~~~~l~~~~~~~Gf~~~~~~~f 240 (258)
+.+ ......+.+.+.++++++||+++.....
T Consensus 158 -----------~~~--------------~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 158 -----------VFY--------------KNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp -----------CCS--------------TTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred -----------chh--------------cccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 000 0113568999999999999999876543
No 69
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.68 E-value=5.2e-16 Score=125.00 Aligned_cols=121 Identities=16% Similarity=0.117 Sum_probs=95.4
Q ss_pred HHHHHhcCCCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhh
Q 025059 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ 100 (258)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 100 (258)
.++.....++.+|||+|||+|..+..++.. +..+++|+|+|+.+++.|++++...+...++.++++|+.+.+- .
T Consensus 14 ~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~-- 89 (197)
T 3eey_A 14 DYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDK--Y-- 89 (197)
T ss_dssp HHHHHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGG--T--
T ss_pred HHHHhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhh--h--
Confidence 344556778899999999999999988876 3459999999999999999999876544479999999755321 1
Q ss_pred hcCCceeEEEecccc-----ccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 101 EKANQADLVCCFQHL-----QMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 101 ~~~~~fD~V~~~~~l-----~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
.+++||+|++...+ +......+....+++++.++|+|||.+++....
T Consensus 90 -~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 90 -IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp -CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred -ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 35799999987644 222344566778999999999999999988644
No 70
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.67 E-value=5.6e-16 Score=126.86 Aligned_cols=105 Identities=24% Similarity=0.249 Sum_probs=83.0
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++ . ++.+.+.|+.+... .......+||+|
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~---~----~~~~~~~~~~~~~~--~~~~~~~~fD~v 120 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA---G----AGEVHLASYAQLAE--AKVPVGKDYDLI 120 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT---C----SSCEEECCHHHHHT--TCSCCCCCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh---c----ccccchhhHHhhcc--cccccCCCccEE
Confidence 3679999999999999999888755 899999999999999887 1 56778887644210 011134569999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
++..+++ . .+...+++++.++|+|||.+++..++.
T Consensus 121 ~~~~~l~-~----~~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 121 CANFALL-H----QDIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp EEESCCC-S----SCCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EECchhh-h----hhHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 9998887 2 235689999999999999999998875
No 71
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.66 E-value=1.7e-16 Score=132.07 Aligned_cols=117 Identities=17% Similarity=0.022 Sum_probs=90.1
Q ss_pred HHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhc
Q 025059 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (258)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (258)
.+.+....+|.+|||||||+|..+..+++....+++|+|+|+.+++.|+++....+. ++.++.+|+.... ..+ +
T Consensus 52 ~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~--~~~~~~~~a~~~~--~~~--~ 125 (236)
T 3orh_A 52 ALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTH--KVIPLKGLWEDVA--PTL--P 125 (236)
T ss_dssp HHHHHHTTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSS--EEEEEESCHHHHG--GGS--C
T ss_pred HHHHhhccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCC--ceEEEeehHHhhc--ccc--c
Confidence 444555678999999999999999888777667899999999999999998876643 7788888863311 111 5
Q ss_pred CCceeEEEecc-ccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 103 ANQADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 103 ~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+++||.|+.-- ...+...+..+...+++++.++|||||+|++.
T Consensus 126 ~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 126 DGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp TTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 78899996522 22233455778899999999999999999875
No 72
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.66 E-value=1.2e-15 Score=121.91 Aligned_cols=112 Identities=17% Similarity=0.166 Sum_probs=94.7
Q ss_pred HHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhc
Q 025059 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (258)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (258)
.++..+.+++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++.. ++.+.++|+.+.++ +
T Consensus 38 ~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~~------~~~~~~~d~~~~~~------~ 104 (195)
T 3cgg_A 38 RLIDAMAPRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDFP------EARWVVGDLSVDQI------S 104 (195)
T ss_dssp HHHHHHSCTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCT------TSEEEECCTTTSCC------C
T ss_pred HHHHHhccCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhCC------CCcEEEcccccCCC------C
Confidence 46677788899999999999999999988754 99999999999999998763 47899999877554 5
Q ss_pred CCceeEEEec-cccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 103 ANQADLVCCF-QHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 103 ~~~fD~V~~~-~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+++||+|++. ..+++ .+.+....++.++.++|+|||.+++..++.
T Consensus 105 ~~~~D~i~~~~~~~~~--~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 105 ETDFDLIVSAGNVMGF--LAEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp CCCEEEEEECCCCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred CCceeEEEECCcHHhh--cChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 6899999998 55665 356778999999999999999999987654
No 73
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.65 E-value=3.5e-16 Score=123.02 Aligned_cols=100 Identities=14% Similarity=0.218 Sum_probs=84.4
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|..+..++.... +++|+|+|+.+++.|+++.. ++.+.++| .++ ++++||+
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~------~v~~~~~d---~~~------~~~~~D~ 78 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEKFD------SVITLSDP---KEI------PDNSVDF 78 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHHCT------TSEEESSG---GGS------CTTCEEE
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhCC------CcEEEeCC---CCC------CCCceEE
Confidence 45778999999999999999988765 99999999999999998821 67888888 333 5689999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|++..++++. ++...+++++.++|+|||.+++..+.
T Consensus 79 v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 114 (170)
T 3i9f_A 79 ILFANSFHDM----DDKQHVISEVKRILKDDGRVIIIDWR 114 (170)
T ss_dssp EEEESCSTTC----SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEccchhcc----cCHHHHHHHHHHhcCCCCEEEEEEcC
Confidence 9999988873 34678999999999999999988543
No 74
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.65 E-value=1.1e-16 Score=143.76 Aligned_cols=149 Identities=19% Similarity=0.260 Sum_probs=106.2
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||||||+|.++..++..+. +++|+|+|+.+++.|+++. . ....... .......++.++++||+|
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~--~------~~~~~~~-~~~~~~~l~~~~~~fD~I 175 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKG--I------RVRTDFF-EKATADDVRRTEGPANVI 175 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTT--C------CEECSCC-SHHHHHHHHHHHCCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcC--C------Ccceeee-chhhHhhcccCCCCEEEE
Confidence 4788999999999999999988766 9999999999999998761 1 1111111 111111122246899999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHHHHHHHHhHHhhhcCCCCCCCCCCCCcccCeeEEEEec
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITFE 189 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~f~ 189 (258)
++..++++. ++...+++++.++|+|||++++.+|+...+.... .|..
T Consensus 176 ~~~~vl~h~----~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~-----------------~~~~------------ 222 (416)
T 4e2x_A 176 YAANTLCHI----PYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKT-----------------SFDQ------------ 222 (416)
T ss_dssp EEESCGGGC----TTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHT-----------------CGGG------------
T ss_pred EECChHHhc----CCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhc-----------------chhh------------
Confidence 999999873 3688999999999999999999998865543210 0000
Q ss_pred ccCCCCCCceeceEEEEccCccCCCccccchHHHHHHHHHcCcEEEEeCChh
Q 025059 190 VEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLN 241 (258)
Q Consensus 190 ~~~~~~~~~g~~y~~~l~~~~~~~~e~lv~~~~l~~~~~~~Gf~~~~~~~f~ 241 (258)
.| .. .....+.+.+.++++++||++++...+.
T Consensus 223 -----------~~----~~-----~~~~~s~~~l~~ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 223 -----------IF----DE-----HFFLFSATSVQGMAQRCGFELVDVQRLP 254 (416)
T ss_dssp -----------CS----TT-----CCEECCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred -----------hh----hh-----hhhcCCHHHHHHHHHHcCCEEEEEEEcc
Confidence 00 00 0124578999999999999999877654
No 75
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.64 E-value=1e-15 Score=122.96 Aligned_cols=105 Identities=19% Similarity=0.148 Sum_probs=88.4
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++....+.. ++.+.++|+.+.++ +++||+|+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~-------~~~~D~v~ 102 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLTF-------DRQYDFIL 102 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCCC-------CCCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCCC-------CCCceEEE
Confidence 678999999999999999988755 9999999999999999988765432 58999999865432 57899999
Q ss_pred eccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
+..++++ .+.++...+++++.++|+|||.+++..
T Consensus 103 ~~~~l~~--~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 103 STVVLMF--LEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp EESCGGG--SCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred Ecchhhh--CCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 9998887 345568899999999999999987763
No 76
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.64 E-value=2.7e-15 Score=126.21 Aligned_cols=111 Identities=16% Similarity=0.170 Sum_probs=90.6
Q ss_pred HHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcC
Q 025059 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (258)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (258)
++..+++++.+|||+|||+|..+..++..+. +++|+|+|+.|++.|+++... .+.++|+.+.++ ++
T Consensus 47 ~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~-------~~~~~d~~~~~~------~~ 112 (260)
T 2avn_A 47 FLEEYLKNPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGVK-------NVVEAKAEDLPF------PS 112 (260)
T ss_dssp HHHHHCCSCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTCS-------CEEECCTTSCCS------CT
T ss_pred HHHHhcCCCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcCC-------CEEECcHHHCCC------CC
Confidence 4455556889999999999999998887755 899999999999999887641 278899877665 57
Q ss_pred CceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchH
Q 025059 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSST 151 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~ 151 (258)
++||+|++..++.+.... ...+++++.++|+|||.+++++++...
T Consensus 113 ~~fD~v~~~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~ 157 (260)
T 2avn_A 113 GAFEAVLALGDVLSYVEN---KDKAFSEIRRVLVPDGLLIATVDNFYT 157 (260)
T ss_dssp TCEEEEEECSSHHHHCSC---HHHHHHHHHHHEEEEEEEEEEEEBHHH
T ss_pred CCEEEEEEcchhhhcccc---HHHHHHHHHHHcCCCeEEEEEeCChHH
Confidence 899999998765543232 788999999999999999999888653
No 77
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.64 E-value=1e-15 Score=130.51 Aligned_cols=104 Identities=20% Similarity=0.187 Sum_probs=90.7
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
++.+|||+|||+|.++..++..+. +++|+|+|+.+++.|+++....+. ++.+.++|+.+.++ .++||+|+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-------~~~fD~i~ 189 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI-------QENYDFIV 189 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC-------CSCEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc-------cCCccEEE
Confidence 688999999999999999988866 999999999999999999887754 78999999865443 67899999
Q ss_pred eccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
+..++|+ .+.+....+++++.++|+|||.+++..
T Consensus 190 ~~~~~~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 190 STVVFMF--LNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp ECSSGGG--SCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred Eccchhh--CCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999987 355678899999999999999987763
No 78
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.64 E-value=1.6e-15 Score=127.76 Aligned_cols=119 Identities=14% Similarity=0.048 Sum_probs=88.2
Q ss_pred HHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh
Q 025059 19 FAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ 98 (258)
Q Consensus 19 ~~k~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 98 (258)
|+...+-.....++.+|||||||+|.++..++..+. +|+|+|+|+.|++.|+++..... ....+...+.....
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~~--v~~~~~~~~~~~~~---- 105 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADRC--VTIDLLDITAEIPK---- 105 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSSC--CEEEECCTTSCCCG----
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcc--ceeeeeeccccccc----
Confidence 444443333455789999999999999999988765 99999999999999999876541 12333222220000
Q ss_pred hhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 99 MQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 99 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
..+++||+|++..++|+ ...++...++.++.++| |||.++++.+.+
T Consensus 106 --~~~~~fD~Vv~~~~l~~--~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 106 --ELAGHFDFVLNDRLINR--FTTEEARRACLGMLSLV-GSGTVRASVKLG 151 (261)
T ss_dssp --GGTTCCSEEEEESCGGG--SCHHHHHHHHHHHHHHH-TTSEEEEEEEBS
T ss_pred --ccCCCccEEEEhhhhHh--CCHHHHHHHHHHHHHhC-cCcEEEEEeccC
Confidence 12578999999998886 34677889999999999 999999996654
No 79
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.63 E-value=7.1e-16 Score=132.26 Aligned_cols=117 Identities=17% Similarity=0.230 Sum_probs=89.5
Q ss_pred CCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCC-----------------------------
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKN----------------------------- 80 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~----------------------------- 80 (258)
++.+|||||||+|..+..++.. +..+++|+|+|+.|++.|+++.......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 5789999999999999999887 4569999999999999999876542211
Q ss_pred ----------------------------ceeEEEEcCCCCCchhhhhhhcCCceeEEEecccccccc--CCHHHHHHHHH
Q 025059 81 ----------------------------FIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCF--ETEERARRLLQ 130 (258)
Q Consensus 81 ----------------------------~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~--~~~~~~~~~l~ 130 (258)
.++.|.++|+...... ..+...++||+|+|..+++|+. .+.+....+++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~-~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDD-LVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHH-HHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccc-cccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 3689999998764410 1111468999999999886521 13557899999
Q ss_pred HHHhcccCCcEEEEEEcC
Q 025059 131 NVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 131 ~i~~~LkpgG~~i~~~~~ 148 (258)
++.++|+|||+|++....
T Consensus 205 ~~~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQP 222 (292)
T ss_dssp HHHHHEEEEEEEEEECCC
T ss_pred HHHHHhCCCcEEEEecCC
Confidence 999999999999987554
No 80
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.63 E-value=5.5e-15 Score=116.68 Aligned_cols=115 Identities=12% Similarity=0.102 Sum_probs=89.1
Q ss_pred HHHHHHh-cCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhh
Q 025059 22 TALIKIY-SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQM 99 (258)
Q Consensus 22 ~~li~~~-~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 99 (258)
..++... ..++.+|||+|||+|..+..++.. +..+++|+|+|+.+++.|+++....+...++ ++++|..+ .+
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~-~~---- 88 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR-AF---- 88 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG-GG----
T ss_pred HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh-hh----
Confidence 3344443 457789999999999999988776 3458999999999999999998876554357 78888643 22
Q ss_pred hhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 100 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
+...++||+|++..++++ ..+++++.++|+|||.+++..+...
T Consensus 89 ~~~~~~~D~i~~~~~~~~--------~~~l~~~~~~L~~gG~l~~~~~~~~ 131 (178)
T 3hm2_A 89 DDVPDNPDVIFIGGGLTA--------PGVFAAAWKRLPVGGRLVANAVTVE 131 (178)
T ss_dssp GGCCSCCSEEEECC-TTC--------TTHHHHHHHTCCTTCEEEEEECSHH
T ss_pred hccCCCCCEEEECCcccH--------HHHHHHHHHhcCCCCEEEEEeeccc
Confidence 112379999999887764 5789999999999999999877654
No 81
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.62 E-value=1.3e-14 Score=115.68 Aligned_cols=111 Identities=15% Similarity=0.151 Sum_probs=92.6
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCc-eeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNF-IAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.++.+|||+|||+|..+..++.. ..+++|+|+++.+++.|+++....+... ++.+.++|+.+. + +.++||+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~------~~~~~D~ 122 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN-V------KDRKYNK 122 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-C------TTSCEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc-c------ccCCceE
Confidence 37889999999999999998887 5599999999999999999987664431 389999998652 2 3578999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchH
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSST 151 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~ 151 (258)
|++...+|+ .......+++++.++|+|||.+++..+....
T Consensus 123 v~~~~~~~~---~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 162 (194)
T 1dus_A 123 IITNPPIRA---GKEVLHRIIEEGKELLKDNGEIWVVIQTKQG 162 (194)
T ss_dssp EEECCCSTT---CHHHHHHHHHHHHHHEEEEEEEEEEEESTHH
T ss_pred EEECCCccc---chhHHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 999887664 3677889999999999999999999887643
No 82
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.62 E-value=1.1e-15 Score=127.26 Aligned_cols=113 Identities=18% Similarity=0.169 Sum_probs=91.4
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|.++..++..+. +++|+|+|+.+++.|+++.... ++.++++|+.+.+....+. ....||+
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~~----~~~~~~~d~~~~~~~~~~~-~~~~~d~ 127 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTAA----NISYRLLDGLVPEQAAQIH-SEIGDAN 127 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCCT----TEEEEECCTTCHHHHHHHH-HHHCSCE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCccc----CceEEECcccccccccccc-cccCccE
Confidence 45788999999999999999988777 8999999999999999987432 7899999997754422211 1235999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
|++..++|+ .+.++...+++++.++|+|||.+++..+..
T Consensus 128 v~~~~~~~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 128 IYMRTGFHH--IPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp EEEESSSTT--SCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred EEEcchhhc--CCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 999999987 344568899999999999999988876554
No 83
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.62 E-value=1.1e-14 Score=119.99 Aligned_cols=118 Identities=15% Similarity=0.094 Sum_probs=92.7
Q ss_pred HHHhcCCCCEEEEEcCC-CCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCC-chhhhhhhc
Q 025059 25 IKIYSHPYVTVCDLYCG-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE-NFETQMQEK 102 (258)
Q Consensus 25 i~~~~~~~~~VLDlGcG-~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~ 102 (258)
+....+++.+|||+||| +|..+..++.....+++|+|+|+.+++.|+++....+. ++.++++|+... ++ +
T Consensus 49 ~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~------~ 120 (230)
T 3evz_A 49 LKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGV------V 120 (230)
T ss_dssp HHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTT------C
T ss_pred hHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhc------c
Confidence 55566789999999999 99999988877445999999999999999999987755 789999997432 22 4
Q ss_pred CCceeEEEecccccccc---------------CCHHHHHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 103 ANQADLVCCFQHLQMCF---------------ETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~~---------------~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
+++||+|++....+..- ...+....+++++.++|+|||.+++.++...
T Consensus 121 ~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 183 (230)
T 3evz_A 121 EGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE 183 (230)
T ss_dssp CSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH
T ss_pred cCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH
Confidence 58999999875443210 1123357899999999999999999888764
No 84
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.61 E-value=4.3e-14 Score=122.98 Aligned_cols=109 Identities=17% Similarity=0.093 Sum_probs=91.4
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.++.+|||+|||+|..+..++.. +..+++++|++ .+++.|+++....+...++.+.++|+.+.++ ...||+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~~D~ 235 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY-------GNDYDL 235 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC-------CSCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC-------CCCCcE
Confidence 56789999999999999988877 34599999999 9999999998766544479999999976544 234999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|++..++|+ .+.++...+++++.++|+|||.+++..+.
T Consensus 236 v~~~~~l~~--~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 273 (335)
T 2r3s_A 236 VLLPNFLHH--FDVATCEQLLRKIKTALAVEGKVIVFDFI 273 (335)
T ss_dssp EEEESCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEcchhcc--CCHHHHHHHHHHHHHhCCCCcEEEEEeec
Confidence 999999997 35677889999999999999998887443
No 85
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.61 E-value=3.6e-15 Score=120.88 Aligned_cols=107 Identities=14% Similarity=0.058 Sum_probs=89.0
Q ss_pred HHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 26 ~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
....+++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++....+.. ++.+.++|+.+ . .+++
T Consensus 55 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~--~------~~~~ 125 (205)
T 3grz_A 55 ERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIY-DIALQKTSLLA--D------VDGK 125 (205)
T ss_dssp HHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-CCEEEESSTTT--T------CCSC
T ss_pred HHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeccccc--c------CCCC
Confidence 3445688999999999999999988776679999999999999999998876543 38999999855 2 3579
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
||+|++...++. ...+++++.++|+|||.+++..+.
T Consensus 126 fD~i~~~~~~~~-------~~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 126 FDLIVANILAEI-------LLDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp EEEEEEESCHHH-------HHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred ceEEEECCcHHH-------HHHHHHHHHHhcCCCCEEEEEecC
Confidence 999999875553 678999999999999999987443
No 86
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.61 E-value=7.5e-15 Score=123.59 Aligned_cols=124 Identities=19% Similarity=0.159 Sum_probs=94.5
Q ss_pred HHHHHHhcC---CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh
Q 025059 22 TALIKIYSH---PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ 98 (258)
Q Consensus 22 ~~li~~~~~---~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 98 (258)
+.++..++. ++.+|||+|||+|..+..++..+..+++|+|+++.+++.|+++....+...++.++++|+.+... .
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~--~ 114 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITD--L 114 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGG--T
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhh--h
Confidence 456666654 68899999999999999888876669999999999999999999877665579999999865321 1
Q ss_pred hhhcCCceeEEEeccccccc----------------cCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 99 MQEKANQADLVCCFQHLQMC----------------FETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 99 ~~~~~~~fD~V~~~~~l~~~----------------~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+ +.++||+|+++...+.. ......+..++..+.++|+|||.+++..+..
T Consensus 115 ~--~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 179 (259)
T 3lpm_A 115 I--PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPE 179 (259)
T ss_dssp S--CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred h--ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHH
Confidence 1 36899999996433211 0112456789999999999999999986543
No 87
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.61 E-value=1.8e-14 Score=117.15 Aligned_cols=108 Identities=13% Similarity=0.031 Sum_probs=87.6
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|..+..++.. ..+++|+|+|+.+++.|+++....+...++.++++|+.+... ....||+
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~------~~~~~D~ 125 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA------DLPLPEA 125 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT------TSCCCSE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc------cCCCCCE
Confidence 457889999999999999999888 559999999999999999998776554368999999865211 2357999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHH
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~ 152 (258)
|++..++ ... +++++.++|+|||.+++..+....+
T Consensus 126 v~~~~~~--------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~ 160 (204)
T 3njr_A 126 VFIGGGG--------SQA-LYDRLWEWLAPGTRIVANAVTLESE 160 (204)
T ss_dssp EEECSCC--------CHH-HHHHHHHHSCTTCEEEEEECSHHHH
T ss_pred EEECCcc--------cHH-HHHHHHHhcCCCcEEEEEecCcccH
Confidence 9987633 144 8999999999999999998876443
No 88
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.61 E-value=6.3e-15 Score=129.06 Aligned_cols=107 Identities=15% Similarity=0.095 Sum_probs=88.9
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||||||+|.++..+++.+..+++|+|+|+ |++.|+++....+...++.++++|+.+.++ ++++||+
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~------~~~~~D~ 134 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL------PVEKVDV 134 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC------SCSCEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC------CCCcEEE
Confidence 457889999999999999988888766999999996 999999998877654589999999987665 5689999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEE
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i 143 (258)
|++.... +.+........++.++.++|+|||.++
T Consensus 135 Ivs~~~~-~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 135 IISEWMG-YFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEECCCB-TTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEcCch-hhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 9986532 223445667889999999999999997
No 89
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.61 E-value=2.5e-14 Score=115.81 Aligned_cols=108 Identities=12% Similarity=0.001 Sum_probs=89.2
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
..++.+|||+|||+|..+..++... ..+++|+|+|+.+++.|+++....+. .++.++++|+.+... ..++||
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~------~~~~~D 110 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLD------DLPDPD 110 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCT------TSCCCS
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhh------cCCCCC
Confidence 4578999999999999999998875 46999999999999999999876654 368999999854322 236799
Q ss_pred EEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
+|++...++ ....+++++.++|+|||.+++..+...
T Consensus 111 ~i~~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 146 (204)
T 3e05_A 111 RVFIGGSGG-------MLEEIIDAVDRRLKSEGVIVLNAVTLD 146 (204)
T ss_dssp EEEESCCTT-------CHHHHHHHHHHHCCTTCEEEEEECBHH
T ss_pred EEEECCCCc-------CHHHHHHHHHHhcCCCeEEEEEecccc
Confidence 999887654 367899999999999999999877643
No 90
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.61 E-value=2.6e-15 Score=131.97 Aligned_cols=108 Identities=15% Similarity=0.094 Sum_probs=90.1
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||+|||+|.++..++..+..+|+|+|+| .|++.|+++....+...++.++++|+.+.++ +.++||+|
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~~fD~I 137 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVEL------PVEKVDII 137 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCC------SSSCEEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccC------CCCceEEE
Confidence 4789999999999999999988877799999999 5999999999877665569999999988765 56899999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
++....+. +........++.++.++|+|||+++..
T Consensus 138 is~~~~~~-l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 138 ISEWMGYC-LFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp EECCCBBT-BTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred EEcccccc-ccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 98654332 333556788999999999999998643
No 91
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=2.1e-15 Score=126.23 Aligned_cols=103 Identities=23% Similarity=0.277 Sum_probs=87.5
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.++.+|||+|||+|..+..++.. +..+++|+|+|+.|++.|+++.. ++.+.++|+.+.+ ++++||+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~------~~~~~~~d~~~~~-------~~~~fD~ 98 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLP------NTNFGKADLATWK-------PAQKADL 98 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHST------TSEEEECCTTTCC-------CSSCEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCC------CcEEEECChhhcC-------ccCCcCE
Confidence 46789999999999999988876 34589999999999999988721 6789999986643 3578999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
|++..++|+. ++...++.++.++|+|||.++++.++.
T Consensus 99 v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 99 LYANAVFQWV----PDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp EEEESCGGGS----TTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred EEEeCchhhC----CCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 9999999973 347789999999999999999998764
No 92
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.60 E-value=1.6e-14 Score=123.11 Aligned_cols=106 Identities=9% Similarity=-0.041 Sum_probs=85.0
Q ss_pred hcCCCCEEEEEcCCCCccHHHH-HHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 28 YSHPYVTVCDLYCGAGVDVDKW-ETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~~-~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
-++++.+|||||||+|..+..+ ++....+|+|+|+|+.|++.|+++.+..+. .+++++++|+.+ + ++++|
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~--l------~d~~F 189 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETV--I------DGLEF 189 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGG--G------GGCCC
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhh--C------CCCCc
Confidence 3468999999999999876444 443456999999999999999999887665 489999999854 2 35789
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
|+|++... .++...+++++.++|||||.+++.....
T Consensus 190 DvV~~~a~-------~~d~~~~l~el~r~LkPGG~Lvv~~~~~ 225 (298)
T 3fpf_A 190 DVLMVAAL-------AEPKRRVFRNIHRYVDTETRIIYRTYTG 225 (298)
T ss_dssp SEEEECTT-------CSCHHHHHHHHHHHCCTTCEEEEEECCG
T ss_pred CEEEECCC-------ccCHHHHHHHHHHHcCCCcEEEEEcCcc
Confidence 99987553 1346789999999999999999886543
No 93
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.60 E-value=6.4e-14 Score=122.87 Aligned_cols=107 Identities=25% Similarity=0.220 Sum_probs=90.3
Q ss_pred CCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 32 YVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
+.+|||+|||+|..+..++.. +..+++++|+ +.+++.|+++....+...++.+..+|+.+.+.. .++.||+|+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-----~~~~~D~v~ 253 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNF-----EGGAADVVM 253 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGG-----TTCCEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCccc-----CCCCccEEE
Confidence 789999999999999999876 3458999999 889999999888765555799999998765410 245699999
Q ss_pred eccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
+..++|+ .+.++...+++++.++|+|||.+++..
T Consensus 254 ~~~vlh~--~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 254 LNDCLHY--FDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp EESCGGG--SCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred Eeccccc--CCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999997 456778999999999999999998873
No 94
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.60 E-value=1.1e-15 Score=128.69 Aligned_cols=101 Identities=12% Similarity=0.060 Sum_probs=86.0
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||||||+|..+..++..+ .+++|+|+|+.|++.|+++. ++.++++|+.+.++ ++++||+|
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~------~~~~fD~v 98 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQG-LFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLAL------PDKSVDGV 98 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTT-CEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCS------CTTCBSEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhCC-CEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCC------CCCCEeEE
Confidence 578999999999999999998744 59999999999998876553 68999999977665 57899999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
++..++++. .+...+++++.++|+ ||.+++..++.
T Consensus 99 ~~~~~l~~~----~~~~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 99 ISILAIHHF----SHLEKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp EEESCGGGC----SSHHHHHHHHHHHBC-SSCEEEEEECG
T ss_pred EEcchHhhc----cCHHHHHHHHHHHhC-CcEEEEEEcCC
Confidence 999999874 457789999999999 99888876654
No 95
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.60 E-value=2.5e-14 Score=124.64 Aligned_cols=106 Identities=17% Similarity=0.049 Sum_probs=89.8
Q ss_pred CCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
+..+|||+|||+|..+..++.. +..+++++|+ +.+++.|+++....+...++.+..+|+. .++ +. .||+|
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~------p~-~~D~v 239 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPL------PA-GAGGY 239 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCC------CC-SCSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCC------CC-CCcEE
Confidence 4689999999999999988876 3458999999 9999999999887655457999999986 333 33 89999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
++..++|+ .+.+....+++++.++|+|||.+++..+
T Consensus 240 ~~~~vlh~--~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 240 VLSAVLHD--WDDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp EEESCGGG--SCHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred EEehhhcc--CCHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 99999997 4566789999999999999999998744
No 96
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.60 E-value=3.2e-14 Score=125.29 Aligned_cols=113 Identities=13% Similarity=0.088 Sum_probs=92.2
Q ss_pred HHHHHh-cCCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhh
Q 025059 23 ALIKIY-SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ 100 (258)
Q Consensus 23 ~li~~~-~~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 100 (258)
.++..+ ..++.+|||+|||+|..+..++... ..+++++|+ +.+++.|++++...+...++.++.+|+.+.++
T Consensus 181 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----- 254 (359)
T 1x19_A 181 LLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY----- 254 (359)
T ss_dssp HHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC-----
T ss_pred HHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC-----
Confidence 344443 3467899999999999999998873 358999999 99999999998876544469999999977554
Q ss_pred hcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 101 EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 101 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
+ .+|+|++..++|+ .+.+....+++++.++|+|||.+++..
T Consensus 255 -~--~~D~v~~~~vlh~--~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 255 -P--EADAVLFCRILYS--ANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp -C--CCSEEEEESCGGG--SCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred -C--CCCEEEEechhcc--CCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 2 2399999999987 356678999999999999999998774
No 97
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.59 E-value=1.4e-13 Score=121.74 Aligned_cols=105 Identities=19% Similarity=0.144 Sum_probs=89.7
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.++.+|||+|||+|..+..++... ..+++++|+ +.+++.|++++...+...++.+..+|+. .++ +. .||+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~------p~-~~D~ 271 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETI------PD-GADV 271 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCC------CS-SCSE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCC------CC-CceE
Confidence 467899999999999999998873 348999999 9999999999887655457999999986 333 33 8999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|++..++|+ .+.+....+++++.++|+|||.+++.
T Consensus 272 v~~~~vlh~--~~d~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 272 YLIKHVLHD--WDDDDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp EEEESCGGG--SCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred EEhhhhhcc--CCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 999999997 45677789999999999999999987
No 98
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.59 E-value=2.2e-14 Score=113.45 Aligned_cols=110 Identities=12% Similarity=0.050 Sum_probs=86.3
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++....+...++.++++|+.+. ++...++||+|
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~fD~i 104 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA-----IDCLTGRFDLV 104 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH-----HHHBCSCEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHh-----HHhhcCCCCEE
Confidence 4678999999999999998888766799999999999999999988765444689999997431 11134679999
Q ss_pred EeccccccccCCHHHHHHHHHHHH--hcccCCcEEEEEEcCc
Q 025059 110 CCFQHLQMCFETEERARRLLQNVS--SLLKPGGYFLGITPDS 149 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~--~~LkpgG~~i~~~~~~ 149 (258)
++....+ .......+..+. ++|+|||++++.++..
T Consensus 105 ~~~~~~~-----~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 105 FLDPPYA-----KETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp EECCSSH-----HHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred EECCCCC-----cchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 9876543 234556667776 9999999999987665
No 99
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.59 E-value=2.3e-14 Score=117.10 Aligned_cols=116 Identities=16% Similarity=0.062 Sum_probs=88.7
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
..++.+|||||||+|..+..++... ..+++|+|+|+.+++.|+++....+. .++.++++|+.+.+ ..+ ++++||
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~--~~~--~~~~~D 113 (214)
T 1yzh_A 39 GNDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLT--DYF--EDGEID 113 (214)
T ss_dssp TSCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGG--GTS--CTTCCS
T ss_pred CCCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHH--hhc--CCCCCC
Confidence 3467899999999999999888774 45999999999999999999877654 27999999987633 111 467899
Q ss_pred EEEeccccccccCCH----HHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 108 LVCCFQHLQMCFETE----ERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 108 ~V~~~~~l~~~~~~~----~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+|++.+...+.-... .....++.++.++|+|||.+++.+.+.
T Consensus 114 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (214)
T 1yzh_A 114 RLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR 159 (214)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH
T ss_pred EEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH
Confidence 999987543210000 013579999999999999999987654
No 100
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.59 E-value=1.8e-14 Score=114.61 Aligned_cols=113 Identities=17% Similarity=0.066 Sum_probs=85.6
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++....+...++.++++|+.+ ....++...++||+|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~fD~i 120 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR--ALEQFYEEKLQFDLV 120 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH--HHHHHHHTTCCEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHH--HHHHHHhcCCCCCEE
Confidence 367899999999999999887776679999999999999999998776543468999999743 111111126789999
Q ss_pred EeccccccccCCHHHHHHHHHHH--HhcccCCcEEEEEEcCc
Q 025059 110 CCFQHLQMCFETEERARRLLQNV--SSLLKPGGYFLGITPDS 149 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i--~~~LkpgG~~i~~~~~~ 149 (258)
++....+. .. ....+..+ .++|+|||.+++..+..
T Consensus 121 ~~~~~~~~--~~---~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 121 LLDPPYAK--QE---IVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp EECCCGGG--CC---HHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred EECCCCCc--hh---HHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 99866432 22 33444555 89999999999987765
No 101
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.58 E-value=4.6e-15 Score=121.99 Aligned_cols=115 Identities=16% Similarity=0.175 Sum_probs=87.6
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.++.+|||||||+|..+..++... ...++|+|+|+.+++.|+++....+.. ++.++++|+.+. +...+ ++++||.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~-l~~~~--~~~~~d~ 108 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEV-LHKMI--PDNSLRM 108 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHH-HHHHS--CTTCEEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHH-HHHHc--CCCChhe
Confidence 367899999999999999998764 358999999999999999998776543 689999997441 00011 5789999
Q ss_pred EEeccccccccCCHHHH------HHHHHHHHhcccCCcEEEEEEcCch
Q 025059 109 VCCFQHLQMCFETEERA------RRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~------~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
|++.+...+ ...... ..+++++.++|+|||.+++.+.+..
T Consensus 109 v~~~~~~p~--~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~ 154 (218)
T 3dxy_A 109 VQLFFPDPW--HKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEP 154 (218)
T ss_dssp EEEESCCCC--CSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHH
T ss_pred EEEeCCCCc--cchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHH
Confidence 998865443 111111 2599999999999999999876654
No 102
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.58 E-value=3.2e-14 Score=134.73 Aligned_cols=112 Identities=20% Similarity=0.326 Sum_probs=93.8
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCC--CeEEEEecChhHHHHHHHHHHhcC-----CCceeEEEEcCCCCCchhhhhhhc
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALI--ANYIGIDVATSGIGEARDTWENQR-----KNFIAEFFEADPCAENFETQMQEK 102 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~ 102 (258)
.++.+|||||||+|.++..++..+. .+|+|+|+|+.|++.|++++.... ...++.++++|+.+.++ .
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~------~ 793 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS------R 793 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT------T
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc------c
Confidence 3788999999999999999987752 599999999999999998775321 11279999999988666 5
Q ss_pred CCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
.++||+|++..++++ ........+++++.++|+|| .+++++|+..
T Consensus 794 d~sFDlVV~~eVLeH--L~dp~l~~~L~eI~RvLKPG-~LIISTPN~e 838 (950)
T 3htx_A 794 LHDVDIGTCLEVIEH--MEEDQACEFGEKVLSLFHPK-LLIVSTPNYE 838 (950)
T ss_dssp SCSCCEEEEESCGGG--SCHHHHHHHHHHHHHTTCCS-EEEEEECBGG
T ss_pred cCCeeEEEEeCchhh--CChHHHHHHHHHHHHHcCCC-EEEEEecCch
Confidence 689999999999998 34566778999999999999 8889999874
No 103
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.58 E-value=4.1e-15 Score=120.61 Aligned_cols=110 Identities=12% Similarity=0.029 Sum_probs=85.2
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCC-ceeEEEEcCCCCCchhhhhhhcCCc-eeE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKN-FIAEFFEADPCAENFETQMQEKANQ-ADL 108 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~-fD~ 108 (258)
++.+|||+|||+|.++..++..+..+|+|+|+|+.|++.|+++....+.. .++.++++|+.+... .+ .+++ ||+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~--~~--~~~~~fD~ 128 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLK--QP--QNQPHFDV 128 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTT--SC--CSSCCEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHH--hh--ccCCCCCE
Confidence 57899999999999998877777679999999999999999998876542 378999999743111 00 2468 999
Q ss_pred EEeccccccccCCHHHHHHHHHHH--HhcccCCcEEEEEEcCc
Q 025059 109 VCCFQHLQMCFETEERARRLLQNV--SSLLKPGGYFLGITPDS 149 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i--~~~LkpgG~~i~~~~~~ 149 (258)
|++...++ ......++..+ .++|+|||.+++.....
T Consensus 129 I~~~~~~~-----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 129 VFLDPPFH-----FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EEECCCSS-----SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred EEECCCCC-----CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 99877633 23456777788 67899999999986654
No 104
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.58 E-value=1.2e-14 Score=118.83 Aligned_cols=107 Identities=11% Similarity=0.009 Sum_probs=79.8
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
.+++.+|||+|||+|..+..++... .++|+|+|+|+.|++.+.++..... ++.++++|+........ ..++||
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~---~v~~~~~d~~~~~~~~~---~~~~fD 128 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERN---NIIPLLFDASKPWKYSG---IVEKVD 128 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCS---SEEEECSCTTCGGGTTT---TCCCEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCC---CeEEEEcCCCCchhhcc---ccccee
Confidence 4578999999999999988887753 3589999999999877766655432 67888888865311000 237899
Q ss_pred EEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
+|++... .......+++++.++|||||.+++..+
T Consensus 129 ~V~~~~~------~~~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 129 LIYQDIA------QKNQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp EEEECCC------STTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEecc------ChhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 9998732 123455679999999999999999853
No 105
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.58 E-value=1.4e-14 Score=118.52 Aligned_cols=116 Identities=15% Similarity=0.095 Sum_probs=87.6
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
..++.+|||||||+|..+..++.. +..+++|+|+|+.+++.|+++....+.. ++.++++|+.+.+ ..+ ++++||
T Consensus 36 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~-nv~~~~~d~~~l~--~~~--~~~~~d 110 (213)
T 2fca_A 36 GNDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQ-NVKLLNIDADTLT--DVF--EPGEVK 110 (213)
T ss_dssp TSCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCS-SEEEECCCGGGHH--HHC--CTTSCC
T ss_pred CCCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCC-CEEEEeCCHHHHH--hhc--CcCCcC
Confidence 346789999999999999998876 3459999999999999999998766542 6899999986522 112 467899
Q ss_pred EEEeccccccccC-CH---HHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 108 LVCCFQHLQMCFE-TE---ERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 108 ~V~~~~~l~~~~~-~~---~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
.|++.+...+.-. +. .....+++++.++|+|||.+++.+.+.
T Consensus 111 ~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~ 156 (213)
T 2fca_A 111 RVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR 156 (213)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH
T ss_pred EEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 9988764432100 00 013678999999999999999987664
No 106
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.58 E-value=2.3e-15 Score=119.80 Aligned_cols=105 Identities=10% Similarity=0.095 Sum_probs=84.1
Q ss_pred hcCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
++++..+|||||||+|.++..++.. +..+|+++|+|+.|++.+++++...+...++.+ +|.... . +.++|
T Consensus 46 ~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~-~------~~~~~ 116 (200)
T 3fzg_A 46 NIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD-V------YKGTY 116 (200)
T ss_dssp HSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH-H------TTSEE
T ss_pred hcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc-C------CCCCc
Confidence 4477889999999999999999776 334999999999999999999987765434555 665221 1 57899
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|+|++...+|+ .++.+..+..+.+.|+|||+||--
T Consensus 117 DvVLa~k~LHl----L~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 117 DVVFLLKMLPV----LKQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp EEEEEETCHHH----HHHTTCCHHHHHHTCEEEEEEEEE
T ss_pred ChhhHhhHHHh----hhhhHHHHHHHHHHhCCCCEEEEe
Confidence 99999999998 356667777999999999988643
No 107
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.58 E-value=7.2e-15 Score=130.37 Aligned_cols=107 Identities=16% Similarity=0.092 Sum_probs=89.9
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||||||+|.++..++..+..+|+|+|+| .|++.|+++....+...++.++++|+.+.++ + ++||+|
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~-~~~D~I 133 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL------P-EKVDVI 133 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC------S-SCEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc------C-CcceEE
Confidence 4789999999999999999988877799999999 9999999999887665569999999876554 3 799999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
++....+ .+........++..+.++|+|||++++.
T Consensus 134 v~~~~~~-~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 134 ISEWMGY-FLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp EECCCBT-TBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred EEcChhh-cccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 9965444 3444556788999999999999999765
No 108
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.57 E-value=3.2e-14 Score=113.18 Aligned_cols=109 Identities=17% Similarity=0.143 Sum_probs=88.7
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|..+..++... .+++|+|+|+.+++.|++++...+...++.+.++|+.+ .+ + ..++||+
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~----~-~~~~~D~ 103 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-AL----C-KIPDIDI 103 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HH----T-TSCCEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hc----c-cCCCCCE
Confidence 4578899999999999998887777 69999999999999999998776543378899998643 12 1 1258999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchH
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSST 151 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~ 151 (258)
|++...++. ...+++++.++|+|||.+++..++...
T Consensus 104 v~~~~~~~~-------~~~~l~~~~~~l~~gG~l~~~~~~~~~ 139 (192)
T 1l3i_A 104 AVVGGSGGE-------LQEILRIIKDKLKPGGRIIVTAILLET 139 (192)
T ss_dssp EEESCCTTC-------HHHHHHHHHHTEEEEEEEEEEECBHHH
T ss_pred EEECCchHH-------HHHHHHHHHHhcCCCcEEEEEecCcch
Confidence 999876554 578999999999999999998877543
No 109
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.57 E-value=2.1e-14 Score=116.62 Aligned_cols=102 Identities=12% Similarity=0.035 Sum_probs=85.8
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|..+..++..+ .+++|+|+|+.+++.|++++...+.. ++.+.++|+..... ..++||+
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~------~~~~~D~ 146 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQ------ARAPFDA 146 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCG------GGCCEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCc------cCCCccE
Confidence 4578999999999999999988874 59999999999999999998876543 68999999865433 3578999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|++..++++... ++.++|+|||.+++..++
T Consensus 147 i~~~~~~~~~~~----------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 147 IIVTAAPPEIPT----------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EEESSBCSSCCT----------HHHHTEEEEEEEEEEECS
T ss_pred EEEccchhhhhH----------HHHHhcccCcEEEEEEcC
Confidence 999998887432 578999999999999776
No 110
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.57 E-value=8.8e-14 Score=122.90 Aligned_cols=107 Identities=19% Similarity=0.120 Sum_probs=89.5
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.++.+|||+|||+|..+..++... ..+++++|+ +.+++.|+++....+...++.++++|+.+ ++ + ..||+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~------~-~~~D~ 251 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PL------P-VTADV 251 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CC------S-CCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cC------C-CCCCE
Confidence 467899999999999999988774 358999999 99999999998776554479999999864 33 2 34999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
|++..++|+ ...+....+++++.++|+|||.+++..+
T Consensus 252 v~~~~vl~~--~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 252 VLLSFVLLN--WSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEESCGGG--SCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEeccccC--CCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999999987 3456667999999999999999988755
No 111
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.57 E-value=1.6e-14 Score=125.89 Aligned_cols=107 Identities=17% Similarity=0.103 Sum_probs=88.1
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|.++..+++.+..+++|+|+| .+++.|+++....+...++.++++|+.+.++ +.++||+
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~------~~~~~D~ 108 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHL------PFPKVDI 108 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCC------SSSCEEE
T ss_pred hcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccC------CCCcccE
Confidence 34788999999999999998888776799999999 6999999998877655579999999987655 4579999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEE
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i 143 (258)
|++....+. +.....+..++.++.++|+|||.++
T Consensus 109 Ivs~~~~~~-l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 109 IISEWMGYF-LLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp EEECCCBTT-BSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred EEEeCchhh-cccHHHHHHHHHHHHhhcCCCeEEE
Confidence 998754332 3345567789999999999999997
No 112
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.57 E-value=7.9e-14 Score=123.75 Aligned_cols=112 Identities=14% Similarity=0.118 Sum_probs=93.4
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
++.+|||+|||+|.++..++..+. +|+|+|+|+.+++.|++++...+. .+.++++|+.+... .+++||+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~--~v~~~~~D~~~~~~------~~~~fD~Ii 303 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANAL--KAQALHSDVDEALT------EEARFDIIV 303 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTSC------TTCCEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCC--CeEEEEcchhhccc------cCCCeEEEE
Confidence 678999999999999999988865 999999999999999999987654 58999999876543 357999999
Q ss_pred ecccccccc-CCHHHHHHHHHHHHhcccCCcEEEEEEcCchH
Q 025059 111 CFQHLQMCF-ETEERARRLLQNVSSLLKPGGYFLGITPDSST 151 (258)
Q Consensus 111 ~~~~l~~~~-~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~ 151 (258)
++..+|+.. ...+....+++++.++|+|||.+++.......
T Consensus 304 ~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~ 345 (381)
T 3dmg_A 304 TNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLK 345 (381)
T ss_dssp ECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSC
T ss_pred ECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCC
Confidence 987776421 12466889999999999999999998776643
No 113
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.56 E-value=1.8e-13 Score=120.34 Aligned_cols=108 Identities=19% Similarity=0.150 Sum_probs=89.5
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.++.+|||+|||+|..+..++... ..+++++|+ +.+++.|+++....+...++.++++|+.+ ++ + ..||+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~------~-~~~D~ 252 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PL------P-RKADA 252 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CC------S-SCEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CC------C-CCccE
Confidence 467899999999999999888774 348999999 99999999998776554479999999864 22 2 34999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|++..++|+ ...+....+++++.++|+|||.+++..+.
T Consensus 253 v~~~~vl~~--~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 253 IILSFVLLN--WPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEESCGGG--SCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEcccccC--CCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 999999987 34666789999999999999999988544
No 114
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.56 E-value=4.9e-14 Score=119.78 Aligned_cols=112 Identities=13% Similarity=0.137 Sum_probs=86.8
Q ss_pred CCCEEEEEcCCC---CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchh-------hhh
Q 025059 31 PYVTVCDLYCGA---GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE-------TQM 99 (258)
Q Consensus 31 ~~~~VLDlGcG~---G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~~ 99 (258)
+..+|||||||+ |..+..+... +..+|+++|+|+.|++.|++++.... ++.++++|+.+.... ..+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~---~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDP---NTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCT---TEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCC---CeEEEEeeCCCchhhhccchhhccC
Confidence 447999999999 9776655554 34599999999999999999885432 789999999763211 111
Q ss_pred hhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 100 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
...+||+|++..++|++- .+....+++++.++|+|||+|+++....
T Consensus 154 --d~~~~d~v~~~~vlh~~~--d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 154 --DFSRPAAIMLVGMLHYLS--PDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp --CTTSCCEEEETTTGGGSC--TTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred --CCCCCEEEEEechhhhCC--cHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 235899999999999842 2267889999999999999999985543
No 115
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.56 E-value=1.6e-14 Score=113.17 Aligned_cols=111 Identities=8% Similarity=0.035 Sum_probs=83.5
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.+++.+|||+|||+|..+..++..+. .++|+|+|+.+++.|+++....+. ++.++++|+.+. ........++||+
T Consensus 39 ~~~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~--~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 39 YPRRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVF--LPEAKAQGERFTV 113 (171)
T ss_dssp CTTCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHH--HHHHHHTTCCEEE
T ss_pred ccCCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHH--HHhhhccCCceEE
Confidence 44678999999999999999988776 599999999999999999887654 788999987431 1111112358999
Q ss_pred EEeccccccccCCHHHHHHHHHHHH--hcccCCcEEEEEEcCch
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVS--SLLKPGGYFLGITPDSS 150 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~--~~LkpgG~~i~~~~~~~ 150 (258)
|++....+ .. ...+++.+. ++|+|||.+++.++...
T Consensus 114 i~~~~~~~---~~---~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 114 AFMAPPYA---MD---LAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp EEECCCTT---SC---TTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred EEECCCCc---hh---HHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 99986544 11 223444444 99999999999877653
No 116
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.55 E-value=2.8e-14 Score=121.13 Aligned_cols=118 Identities=16% Similarity=0.175 Sum_probs=86.0
Q ss_pred HHHHHHHHHhcCCCCEEEEEcCCCCc----cHHHHHHc-C----CCeEEEEecChhHHHHHHHHHHh-------------
Q 025059 19 FAKTALIKIYSHPYVTVCDLYCGAGV----DVDKWETA-L----IANYIGIDVATSGIGEARDTWEN------------- 76 (258)
Q Consensus 19 ~~k~~li~~~~~~~~~VLDlGcG~G~----~~~~~~~~-~----~~~v~gvD~s~~~l~~a~~~~~~------------- 76 (258)
++...++.. .++.+|||+|||||. .+..++.. + ..+++|+|+|+.||+.|++..-.
T Consensus 95 ~l~~~llp~--~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~ 172 (274)
T 1af7_A 95 ILAEHARRR--HGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQ 172 (274)
T ss_dssp HHHHHHHHS--CSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHH
T ss_pred HHHHHccCC--CCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHH
Confidence 334444433 245799999999998 44444443 2 23899999999999999986410
Q ss_pred ------c--CCC---------ceeEEEEcCCCCCchhhhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCC
Q 025059 77 ------Q--RKN---------FIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG 139 (258)
Q Consensus 77 ------~--~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lkpg 139 (258)
. ..+ .++.|.++|+.+.++. ..++||+|+|..+++| | ..+....++.+++++|+||
T Consensus 173 ~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~-----~~~~fDlI~crnvliy-f-~~~~~~~vl~~~~~~L~pg 245 (274)
T 1af7_A 173 RYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYN-----VPGPFDAIFCRNVMIY-F-DKTTQEDILRRFVPLLKPD 245 (274)
T ss_dssp HHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCC-----CCCCEEEEEECSSGGG-S-CHHHHHHHHHHHGGGEEEE
T ss_pred HHhhccccCCCCceeechhhcccCeEEecccCCCCCC-----cCCCeeEEEECCchHh-C-CHHHHHHHHHHHHHHhCCC
Confidence 0 000 1589999999775441 1478999999999987 3 4677899999999999999
Q ss_pred cEEEEE
Q 025059 140 GYFLGI 145 (258)
Q Consensus 140 G~~i~~ 145 (258)
|++++.
T Consensus 246 G~L~lg 251 (274)
T 1af7_A 246 GLLFAG 251 (274)
T ss_dssp EEEEEC
T ss_pred cEEEEE
Confidence 999874
No 117
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.55 E-value=1.2e-13 Score=109.14 Aligned_cols=105 Identities=9% Similarity=-0.006 Sum_probs=85.9
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|..+..++. +..+++|+|+|+.+++.|+++....+. .++.++++|+.+ ++ ++++||+
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~-~~------~~~~~D~ 103 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAED-VL------DKLEFNK 103 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHH-HG------GGCCCSE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccc-cc------cCCCCcE
Confidence 34778999999999999998877 556999999999999999999877654 268999999754 33 3478999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHH
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~ 152 (258)
|++... .....+++++.++ |||.+++..++...+
T Consensus 104 i~~~~~--------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~ 137 (183)
T 2yxd_A 104 AFIGGT--------KNIEKIIEILDKK--KINHIVANTIVLENA 137 (183)
T ss_dssp EEECSC--------SCHHHHHHHHHHT--TCCEEEEEESCHHHH
T ss_pred EEECCc--------ccHHHHHHHHhhC--CCCEEEEEecccccH
Confidence 999875 2366788888888 999999998876544
No 118
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.55 E-value=2.6e-14 Score=125.48 Aligned_cols=107 Identities=16% Similarity=0.084 Sum_probs=86.6
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||||||+|.++..+++.+..+|+|+|+|+ +++.|+++.+..+...++.++++|+.+.++ +++||+|
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~-------~~~~D~I 120 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL-------PEQVDII 120 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC-------SSCEEEE
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC-------CCceeEE
Confidence 47899999999999999988887767999999996 889999988876654579999999877554 3689999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
++....++. ..+.....+.++.++|+|||.+++..
T Consensus 121 vs~~~~~~~--~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 121 ISEPMGYML--FNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp EECCCBTTB--TTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred EEeCchhcC--ChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 998665542 23345667788999999999998653
No 119
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.55 E-value=3.8e-14 Score=117.81 Aligned_cols=118 Identities=13% Similarity=0.090 Sum_probs=83.6
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhc-----CCCceeEEEEcCCCC-Cchhhhhhh
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQ-----RKNFIAEFFEADPCA-ENFETQMQE 101 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~-----~~~~~~~~~~~d~~~-~~~~~~~~~ 101 (258)
..++.+|||||||+|.++..++... ...++|+|+|+.|++.|+++.... ....++.++++|+.. .+ ..+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~--~~~-- 119 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLP--NFF-- 119 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHH--HHC--
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhh--hhC--
Confidence 3466789999999999999988763 458999999999999999876531 111268999999865 22 111
Q ss_pred cCCceeEEEeccccccccC-CHHH---HHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 102 KANQADLVCCFQHLQMCFE-TEER---ARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 102 ~~~~fD~V~~~~~l~~~~~-~~~~---~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
++++||.|++.+.-.+.-. +... ...+++++.++|+|||.+++.+....
T Consensus 120 ~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~ 172 (235)
T 3ckk_A 120 YKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLE 172 (235)
T ss_dssp CTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHH
T ss_pred CCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHH
Confidence 4689999987664332100 0000 14799999999999999999877653
No 120
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.55 E-value=4.3e-14 Score=116.86 Aligned_cols=107 Identities=14% Similarity=0.090 Sum_probs=85.8
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
++||.+|||+|||+|.++..+++. +.++|+|+|+|+.|++.++++..... ++..+..|...... .+...+.+
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~---ni~~V~~d~~~p~~---~~~~~~~v 148 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR---NIFPILGDARFPEK---YRHLVEGV 148 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT---TEEEEESCTTCGGG---GTTTCCCE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc---CeeEEEEeccCccc---cccccceE
Confidence 469999999999999999999886 44699999999999999988876543 68888998866432 12246789
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
|+|++.... ..+...++.++.+.|||||.+++...
T Consensus 149 DvVf~d~~~------~~~~~~~l~~~~r~LKpGG~lvI~ik 183 (233)
T 4df3_A 149 DGLYADVAQ------PEQAAIVVRNARFFLRDGGYMLMAIK 183 (233)
T ss_dssp EEEEECCCC------TTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEeccC------ChhHHHHHHHHHHhccCCCEEEEEEe
Confidence 999875433 23567899999999999999998743
No 121
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.55 E-value=3e-14 Score=121.29 Aligned_cols=110 Identities=14% Similarity=0.022 Sum_probs=90.2
Q ss_pred HHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcC
Q 025059 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (258)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (258)
.+...++++.+|||+|||+|.++..++..+..+++|+|+|+.+++.|+++...++...++.++++|+.+... .
T Consensus 118 ~l~~~~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-------~ 190 (278)
T 2frn_A 118 RMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-------E 190 (278)
T ss_dssp HHHHHCCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-------C
T ss_pred HHHHhCCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-------c
Confidence 344556789999999999999999998887657999999999999999998877655468999999876442 5
Q ss_pred CceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
++||+|++..... ...++.++.++|+|||.+++....
T Consensus 191 ~~fD~Vi~~~p~~--------~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 191 NIADRILMGYVVR--------THEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp SCEEEEEECCCSS--------GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred CCccEEEECCchh--------HHHHHHHHHHHCCCCeEEEEEEee
Confidence 7899998864321 357888999999999999987554
No 122
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.54 E-value=3.2e-13 Score=117.57 Aligned_cols=103 Identities=18% Similarity=0.142 Sum_probs=86.7
Q ss_pred CEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEEe
Q 025059 33 VTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (258)
Q Consensus 33 ~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~ 111 (258)
.+|||+|||+|..+..++.. +..+++++|+ +.+++.|+++....+...++.++.+|+.+ ++ +++||+|++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-------~~~~D~v~~ 239 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EV-------PSNGDIYLL 239 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CC-------CSSCSEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CC-------CCCCCEEEE
Confidence 89999999999999998876 3458999999 99999999987654333379999999866 33 367999999
Q ss_pred ccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 112 FQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 112 ~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
..++|+ .+.+....+++++.++|+|||.+++..
T Consensus 240 ~~vl~~--~~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 240 SRIIGD--LDEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp ESCGGG--CCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred chhccC--CCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999986 356677899999999999999999883
No 123
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.54 E-value=5.2e-14 Score=118.71 Aligned_cols=101 Identities=21% Similarity=0.337 Sum_probs=84.4
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.++.+|||+|||+|..+..++.. +..+++|+|+|+.+++.|+++.. ++.+.++|+...++ ++++||+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~------~~~~fD~ 151 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP------QVTFCVASSHRLPF------SDTSMDA 151 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTSCSB------CTTCEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCC------CcEEEEcchhhCCC------CCCceeE
Confidence 57889999999999999999887 24599999999999999988752 57899999877665 5679999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHHH
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIW 153 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~ 153 (258)
|++.++. .++.++.++|+|||.+++..|+...+.
T Consensus 152 v~~~~~~-----------~~l~~~~~~L~pgG~l~~~~~~~~~~~ 185 (269)
T 1p91_A 152 IIRIYAP-----------CKAEELARVVKPGGWVITATPGPRHLM 185 (269)
T ss_dssp EEEESCC-----------CCHHHHHHHEEEEEEEEEEEECTTTTH
T ss_pred EEEeCCh-----------hhHHHHHHhcCCCcEEEEEEcCHHHHH
Confidence 9987643 247899999999999999998876544
No 124
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.54 E-value=3e-14 Score=115.61 Aligned_cols=108 Identities=8% Similarity=0.004 Sum_probs=83.0
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
++.+|||+|||+|..+..++..+..+|+|+|+|+.|++.|+++....+. .++.++++|+.+ .++...++||+|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~-----~~~~~~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMS-----FLAQKGTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHH-----HHSSCCCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHH-----HHhhcCCCCCEEE
Confidence 5789999999999999887777766999999999999999999887654 378999999643 1111357899999
Q ss_pred eccccccccCCHHHHHHHHHHHHh--cccCCcEEEEEEcCc
Q 025059 111 CFQHLQMCFETEERARRLLQNVSS--LLKPGGYFLGITPDS 149 (258)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~i~~--~LkpgG~~i~~~~~~ 149 (258)
+...++. .....+++.+.+ +|+|||++++.....
T Consensus 128 ~~~p~~~-----~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 128 VDPPFRR-----GLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp ECCSSST-----TTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred ECCCCCC-----CcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 8765331 234556666654 699999999886554
No 125
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.54 E-value=6.4e-14 Score=115.46 Aligned_cols=101 Identities=12% Similarity=0.052 Sum_probs=84.0
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|..+..++..+ .+++|+|+|+.+++.|+++....+ ++.+.++|+..... ..++||+
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~------~~~~fD~ 137 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYE------EEKPYDR 137 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCG------GGCCEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccccc------cCCCccE
Confidence 4578899999999999999988876 599999999999999999987654 68999999754221 3578999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
|++..++++.. .++.++|+|||.+++..++.
T Consensus 138 v~~~~~~~~~~----------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 138 VVVWATAPTLL----------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp EEESSBBSSCC----------HHHHHTEEEEEEEEEEECSS
T ss_pred EEECCcHHHHH----------HHHHHHcCCCcEEEEEEcCC
Confidence 99999888632 36889999999999997764
No 126
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.54 E-value=1.1e-13 Score=122.17 Aligned_cols=107 Identities=14% Similarity=0.023 Sum_probs=90.8
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCC--chhhhhhhcCCce
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE--NFETQMQEKANQA 106 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~f 106 (258)
.+..+|||||||+|..+..++.. +..+++++|+ +.+++.|+++....+...++.++.+|+.+. ++ + ++|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------p-~~~ 249 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPF------P-TGF 249 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCC------C-CCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCC------C-CCc
Confidence 36689999999999999999876 3458999999 999999999987665445799999999765 24 3 689
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
|+|++..++|+ .+.++...+++++.++|+|||.+++..
T Consensus 250 D~v~~~~vlh~--~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 250 DAVWMSQFLDC--FSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp SEEEEESCSTT--SCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CEEEEechhhh--CCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99999999986 456778899999999999999998874
No 127
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.53 E-value=2.6e-14 Score=120.07 Aligned_cols=105 Identities=21% Similarity=0.131 Sum_probs=85.7
Q ss_pred HHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 26 ~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
.....++.+|||+|||+|.++..++..+. +++|+|+++.+++.|+++...++.. +.+.++|+... + +.++
T Consensus 115 ~~~~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~-----~--~~~~ 184 (254)
T 2nxc_A 115 ARHLRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAA-----L--PFGP 184 (254)
T ss_dssp HHHCCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHH-----G--GGCC
T ss_pred HHhcCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhc-----C--cCCC
Confidence 34467889999999999999998888777 9999999999999999998876543 78888886331 1 3578
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
||+|+++...+ ....++.++.++|+|||.++++.+
T Consensus 185 fD~Vv~n~~~~-------~~~~~l~~~~~~LkpgG~lils~~ 219 (254)
T 2nxc_A 185 FDLLVANLYAE-------LHAALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp EEEEEEECCHH-------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEEEECCcHH-------HHHHHHHHHHHHcCCCCEEEEEee
Confidence 99999865433 367899999999999999998743
No 128
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.53 E-value=6.3e-14 Score=124.05 Aligned_cols=110 Identities=15% Similarity=0.058 Sum_probs=85.0
Q ss_pred HhcCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHH-------hcCC-CceeEEEEcCCCCCchhh
Q 025059 27 IYSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWE-------NQRK-NFIAEFFEADPCAENFET 97 (258)
Q Consensus 27 ~~~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~-------~~~~-~~~~~~~~~d~~~~~~~~ 97 (258)
..+.++.+|||||||+|..+..++.. +..+++|+|+|+.+++.|++..+ ..+. ..++.|+++|+.+.++..
T Consensus 169 l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d 248 (438)
T 3uwp_A 169 IKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRE 248 (438)
T ss_dssp HCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHH
T ss_pred cCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCcccc
Confidence 34568999999999999999988765 55469999999999999987542 2222 138999999998766522
Q ss_pred hhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 98 QMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 98 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
. -..||+|+++..++ .++....|.++.++|||||.++++
T Consensus 249 ~----~~~aDVVf~Nn~~F-----~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 249 R----IANTSVIFVNNFAF-----GPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp H----HHTCSEEEECCTTC-----CHHHHHHHHHHHTTSCTTCEEEES
T ss_pred c----cCCccEEEEccccc-----CchHHHHHHHHHHcCCCCcEEEEe
Confidence 1 14799999875432 356788889999999999999987
No 129
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.52 E-value=1e-14 Score=120.28 Aligned_cols=97 Identities=16% Similarity=0.228 Sum_probs=79.8
Q ss_pred HHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCC-CCchhhhhhhc
Q 025059 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPC-AENFETQMQEK 102 (258)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~ 102 (258)
++....+++.+|||+|||+|..+..++..+. +++|+|+|+.+++.|+++.. ++.++++|+. ..++ +
T Consensus 41 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~~------~ 107 (226)
T 3m33_A 41 WLSRLLTPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARANAP------HADVYEWNGKGELPA------G 107 (226)
T ss_dssp HHHHHCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHCT------TSEEEECCSCSSCCT------T
T ss_pred HHHhcCCCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhCC------CceEEEcchhhccCC------c
Confidence 3444567889999999999999999988754 99999999999999998821 6899999984 3443 4
Q ss_pred -CCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEE
Q 025059 103 -ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (258)
Q Consensus 103 -~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i 143 (258)
+++||+|++.. +...+++++.++|+|||.++
T Consensus 108 ~~~~fD~v~~~~----------~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 108 LGAPFGLIVSRR----------GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp CCCCEEEEEEES----------CCSGGGGGHHHHEEEEEEEE
T ss_pred CCCCEEEEEeCC----------CHHHHHHHHHHHcCCCcEEE
Confidence 68999999863 24467889999999999998
No 130
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.52 E-value=1.1e-13 Score=115.19 Aligned_cols=105 Identities=17% Similarity=0.152 Sum_probs=82.7
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
+++.+|||+|||+|..+..++.. +..+++|+|+|+.|++.|+++....+.. ++.++++|+.+.++. +...++||+
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~---~~~~~~fD~ 144 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQR---KDVRESYDI 144 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTC---TTTTTCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhccc---ccccCCccE
Confidence 36789999999999999888764 4458999999999999999988776543 589999997442210 001578999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
|++... .+...+++.+.++|+|||.+++..
T Consensus 145 V~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 145 VTARAV--------ARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp EEEECC--------SCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEEecc--------CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 998652 226789999999999999998874
No 131
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.52 E-value=3e-13 Score=109.43 Aligned_cols=101 Identities=12% Similarity=0.012 Sum_probs=83.2
Q ss_pred CCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
++.+|||+|||+|..+..++.. +..+++|+|+|+.+++.|+++....+.. ++.+.++|+.+.. +.++||+|
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~-------~~~~~D~i 136 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFP-------SEPPFDGV 136 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSC-------CCSCEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCC-------ccCCcCEE
Confidence 4789999999999999998876 4469999999999999999998776543 4899999986643 35789999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
++.. ++ ....++.++.++|+|||.+++...
T Consensus 137 ~~~~-~~-------~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 137 ISRA-FA-------SLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp ECSC-SS-------SHHHHHHHHTTSEEEEEEEEEEES
T ss_pred EEec-cC-------CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 8754 22 256899999999999999998854
No 132
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.51 E-value=7.8e-14 Score=122.19 Aligned_cols=111 Identities=18% Similarity=0.195 Sum_probs=90.5
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCC-CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.++.+|||+|||+|..+..++..+. .+++|+|+|+.|++.|+++....+. ...+..+|+.. . .+++||+
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~--~~~~~~~d~~~--~------~~~~fD~ 264 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV--EGEVFASNVFS--E------VKGRFDM 264 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTT--T------CCSCEEE
T ss_pred CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC--CCEEEEccccc--c------ccCCeeE
Confidence 3567999999999999999888754 4899999999999999999887644 46778888754 2 3578999
Q ss_pred EEecccccccc-CCHHHHHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 109 VCCFQHLQMCF-ETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 109 V~~~~~l~~~~-~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
|++...+|+.. .+......+++++.++|+|||.+++..+...
T Consensus 265 Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 307 (343)
T 2pjd_A 265 IISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFL 307 (343)
T ss_dssp EEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTS
T ss_pred EEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCC
Confidence 99998877422 1345678999999999999999999977653
No 133
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.51 E-value=9.4e-14 Score=114.77 Aligned_cols=105 Identities=16% Similarity=0.061 Sum_probs=81.5
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
..++.+|||+|||+|..+..++.. +..+++|+|+|+.+++.|+++.... .++.++++|+..... ..+ ..++||
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~--~~~-~~~~~D 145 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQE--YAN-IVEKVD 145 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGG--GTT-TSCCEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCccc--ccc-cCccEE
Confidence 347889999999999999998877 4469999999999999999887654 278999999876211 000 127899
Q ss_pred EEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+|++. +........++.++.++|+|||.+++.
T Consensus 146 ~v~~~------~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 146 VIYED------VAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEC------CCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEe------cCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 99832 123344577899999999999999986
No 134
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.50 E-value=1e-13 Score=114.80 Aligned_cols=104 Identities=10% Similarity=0.085 Sum_probs=83.8
Q ss_pred CCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
++.+|||||||+|..+..++.. +..+++++|+++.+++.|++++...+...++.++++|+.+.. +. ..+++||+|
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~--~~~~~fD~V 146 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQF--EN--VNDKVYDMI 146 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCH--HH--HTTSCEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHH--Hh--hccCCccEE
Confidence 6789999999999999988774 346999999999999999999987765447999999985421 10 125799999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
++..... ....+++.+.++|+|||++++.
T Consensus 147 ~~~~~~~-------~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 147 FIDAAKA-------QSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp EEETTSS-------SHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEcCcHH-------HHHHHHHHHHHhcCCCeEEEEe
Confidence 8765332 2667999999999999999885
No 135
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=7.4e-14 Score=117.73 Aligned_cols=128 Identities=17% Similarity=0.076 Sum_probs=94.0
Q ss_pred HHHHHHHHhcC--CCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHh---cCCCceeEEEEcCCCCC
Q 025059 20 AKTALIKIYSH--PYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWEN---QRKNFIAEFFEADPCAE 93 (258)
Q Consensus 20 ~k~~li~~~~~--~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~---~~~~~~~~~~~~d~~~~ 93 (258)
+-.+++..++. ++.+|||+|||+|..+..++... ..+++|+|+++.+++.|+++... .+...++.++++|+.+.
T Consensus 23 ~D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~ 102 (260)
T 2ozv_A 23 MDAMLLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLR 102 (260)
T ss_dssp CHHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCC
T ss_pred cHHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHH
Confidence 45566666654 67899999999999998888774 35899999999999999999876 55544699999999764
Q ss_pred chhh---hhhhcCCceeEEEeccccccc--------------cCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 94 NFET---QMQEKANQADLVCCFQHLQMC--------------FETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 94 ~~~~---~~~~~~~~fD~V~~~~~l~~~--------------~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
.... .+ +.++||+|+++...+.. .........+++.+.++|+|||.+++..+..
T Consensus 103 ~~~~~~~~~--~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 173 (260)
T 2ozv_A 103 AKARVEAGL--PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ 173 (260)
T ss_dssp HHHHHHTTC--CTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred hhhhhhhcc--CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH
Confidence 2100 01 35789999997432210 0111236788999999999999999887654
No 136
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.50 E-value=1.7e-13 Score=111.72 Aligned_cols=104 Identities=13% Similarity=0.012 Sum_probs=83.8
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcC-C-CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETAL-I-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
..++.+|||+|||+|..+..++... . .+++++|+|+.+++.|+++....+.. ++.+.++|+..... ..++|
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~------~~~~f 147 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTLGYE------PLAPY 147 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGGCCG------GGCCE
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcccCCC------CCCCe
Confidence 4578899999999999999888764 2 59999999999999999988765432 58899999733211 25689
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
|+|++..++++.. .++.++|+|||.+++.+++.
T Consensus 148 D~v~~~~~~~~~~----------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 148 DRIYTTAAGPKIP----------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp EEEEESSBBSSCC----------HHHHHTEEEEEEEEEEESSS
T ss_pred eEEEECCchHHHH----------HHHHHHcCCCcEEEEEECCC
Confidence 9999999888632 47899999999999997764
No 137
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.50 E-value=4.1e-14 Score=116.82 Aligned_cols=120 Identities=24% Similarity=0.176 Sum_probs=82.3
Q ss_pred HHHHHHHhcCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecC-hhHHHHH---HHHHHhcCCCceeEEEEcCCCCCch
Q 025059 21 KTALIKIYSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVA-TSGIGEA---RDTWENQRKNFIAEFFEADPCAENF 95 (258)
Q Consensus 21 k~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s-~~~l~~a---~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (258)
...++.....++.+|||||||+|..+..++.. +..+++|+|+| +.|++.| +++....+.. ++.+.++|+...+.
T Consensus 14 ~~~~~~~~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~ 92 (225)
T 3p2e_A 14 KDELTEIIGQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLPF 92 (225)
T ss_dssp HHHHHHHHTTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCCG
T ss_pred HHHHHHHhCCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhhh
Confidence 34455566678899999999999999998764 34589999999 6777766 6665554432 68999999876532
Q ss_pred hhhhhhcCCceeEEEeccccccccCC-HHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 96 ETQMQEKANQADLVCCFQHLQMCFET-EERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 96 ~~~~~~~~~~fD~V~~~~~l~~~~~~-~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
. ..+.+|.|.+.+........ ......++.++.++|||||.+++.+
T Consensus 93 ~-----~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 93 E-----LKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp G-----GTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred h-----ccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 1 13566666665432210000 0012468999999999999999853
No 138
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.50 E-value=7.3e-14 Score=123.34 Aligned_cols=104 Identities=16% Similarity=0.090 Sum_probs=87.4
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
++.+|||||||+|.++..+++.+..+|+|+|.|+ |++.|++....+++..++.++++|+.+..+ ++++|+|+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l-------pe~~Dviv 154 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL-------PEQVDAIV 154 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC-------SSCEEEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC-------CccccEEE
Confidence 6899999999999988888888888999999986 889999998888777789999999987665 47899999
Q ss_pred eccccccccCCHHHHHHHHHHHHhcccCCcEEE
Q 025059 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (258)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i 143 (258)
+-.. .+.+..+..+..++....+.|+|||.++
T Consensus 155 sE~~-~~~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 155 SEWM-GYGLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp CCCC-BTTBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred eecc-cccccccchhhhHHHHHHhhCCCCceEC
Confidence 8542 2334446668889999999999999986
No 139
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.50 E-value=3.2e-13 Score=110.82 Aligned_cols=110 Identities=12% Similarity=0.054 Sum_probs=83.9
Q ss_pred CCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cCCce
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KANQA 106 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~f 106 (258)
++.+|||||||+|..+..++.. ...+++++|+++.+++.|++++...+...+++++++|+.+. .+.+.. ..++|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--l~~~~~~~~~~~f 135 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDL--IPQLKKKYDVDTL 135 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH--GGGTTTTSCCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHH--HHHHHHhcCCCce
Confidence 6789999999999999998875 24699999999999999999988776554799999996331 111100 12689
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
|+|++....+. ......++..+ ++|+|||++++...
T Consensus 136 D~V~~d~~~~~----~~~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 136 DMVFLDHWKDR----YLPDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp SEEEECSCGGG----HHHHHHHHHHT-TCCCTTCEEEESCC
T ss_pred EEEEEcCCccc----chHHHHHHHhc-cccCCCeEEEEeCC
Confidence 99998876554 34455677777 99999999998733
No 140
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.50 E-value=1.2e-13 Score=114.14 Aligned_cols=107 Identities=12% Similarity=0.059 Sum_probs=83.2
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
..++.+|||+|||+|.++..++.. +..+++|+|+|+.|++.+.+...... ++.++++|+.+... ++...++|
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~---~v~~~~~d~~~~~~---~~~~~~~~ 148 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRT---NIIPVIEDARHPHK---YRMLIAMV 148 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCT---TEEEECSCTTCGGG---GGGGCCCE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccC---CeEEEEcccCChhh---hcccCCcE
Confidence 457889999999999999999876 34699999999999888877766542 78999999876321 11136789
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
|+|++... .......++.++.++|+|||.+++.+.
T Consensus 149 D~V~~~~~------~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 149 DVIFADVA------QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp EEEEECCC------CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEcCC------CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 99998553 233456678899999999999999754
No 141
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.50 E-value=2.2e-13 Score=121.21 Aligned_cols=123 Identities=11% Similarity=0.063 Sum_probs=93.6
Q ss_pred HHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCc-eeEEEEcCCCCCchhhhhhhcCC
Q 025059 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNF-IAEFFEADPCAENFETQMQEKAN 104 (258)
Q Consensus 26 ~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~ 104 (258)
..++.++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.|+++.+.++... ++.++++|+.+ +.+.+.....
T Consensus 207 ~~~~~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~--~l~~~~~~~~ 284 (385)
T 2b78_A 207 INGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFD--YFKYARRHHL 284 (385)
T ss_dssp HHTTTBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHH--HHHHHHHTTC
T ss_pred HHHhcCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHH--HHHHHHHhCC
Confidence 33335688999999999999999988776699999999999999999998876543 68999999743 1111211246
Q ss_pred ceeEEEecccc-----ccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 105 QADLVCCFQHL-----QMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 105 ~fD~V~~~~~l-----~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
+||+|++.-.. ............++..+.++|+|||++++.+....
T Consensus 285 ~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 285 TYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp CEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 89999985322 22334456678889999999999999999876654
No 142
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.49 E-value=5.2e-13 Score=111.70 Aligned_cols=107 Identities=9% Similarity=0.040 Sum_probs=84.1
Q ss_pred CCCEEEEEcCCCCccHHHHHHc-C-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
++.+|||||||+|..+..++.. + ..+++++|+|+.+++.|++++...+...++.++++|+.+. .+.+ ...++||+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~--l~~~-~~~~~fD~ 139 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQS--LESL-GECPAFDL 139 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH--HHTC-CSCCCCSE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--HHhc-CCCCCeEE
Confidence 6789999999999999988876 2 4699999999999999999998776555799999997431 1111 02358999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
|++.... .....+++++.++|+|||++++...
T Consensus 140 V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 140 IFIDADK-------PNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp EEECSCG-------GGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred EEECCch-------HHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 9886532 3356789999999999999998733
No 143
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.49 E-value=2.3e-13 Score=120.53 Aligned_cols=116 Identities=16% Similarity=0.155 Sum_probs=89.4
Q ss_pred CCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcCCC--ceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 31 PYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKN--FIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
++.+|||+|||+|.++..++... ..+++|+|+|+.+++.|+++...++.. .++.+..+|+.+ .+ ++++||
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~------~~~~fD 294 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GV------EPFRFN 294 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TC------CTTCEE
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cC------CCCCee
Confidence 55899999999999999998874 469999999999999999998776432 258889999866 22 467999
Q ss_pred EEEeccccccccC-CHHHHHHHHHHHHhcccCCcEEEEEEcCchHHH
Q 025059 108 LVCCFQHLQMCFE-TEERARRLLQNVSSLLKPGGYFLGITPDSSTIW 153 (258)
Q Consensus 108 ~V~~~~~l~~~~~-~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~ 153 (258)
+|++...+|.... .......+++++.++|+|||.+++.........
T Consensus 295 ~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~ 341 (375)
T 4dcm_A 295 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF 341 (375)
T ss_dssp EEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHH
T ss_pred EEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHH
Confidence 9999887764111 112345789999999999999999876654433
No 144
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.49 E-value=3.2e-13 Score=111.31 Aligned_cols=115 Identities=10% Similarity=-0.097 Sum_probs=93.2
Q ss_pred HHHHhcCCCCEEEEEcCCCCccHHHHHHcCC-CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhc
Q 025059 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (258)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (258)
.+..+++++.+|||||||+|..+..++..+. .+++++|+++.+++.|+++...++...++.+.++|+.+... +
T Consensus 14 ~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~------~ 87 (230)
T 3lec_A 14 KVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE------E 87 (230)
T ss_dssp HHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC------G
T ss_pred HHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc------c
Confidence 4567888999999999999999999988764 58999999999999999999988776679999999754322 2
Q ss_pred CCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
.++||+|++... ..+....++......|+++|.||++.....
T Consensus 88 ~~~~D~IviaGm------Gg~lI~~IL~~~~~~l~~~~~lIlqp~~~~ 129 (230)
T 3lec_A 88 ADNIDTITICGM------GGRLIADILNNDIDKLQHVKTLVLQPNNRE 129 (230)
T ss_dssp GGCCCEEEEEEE------CHHHHHHHHHHTGGGGTTCCEEEEEESSCH
T ss_pred ccccCEEEEeCC------chHHHHHHHHHHHHHhCcCCEEEEECCCCh
Confidence 347999876442 235577899999999999999999866553
No 145
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.49 E-value=2.9e-13 Score=110.97 Aligned_cols=107 Identities=13% Similarity=0.063 Sum_probs=84.1
Q ss_pred CCCEEEEEcCCCCccHHHHHHcC--CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhc-CCcee
Q 025059 31 PYVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK-ANQAD 107 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~fD 107 (258)
++.+|||||||+|..+..++... ..+++++|+++.+++.|++++...+...++.++++|+.+ ..+.+... .++||
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~fD 135 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALD--SLQQIENEKYEPFD 135 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH--HHHHHHHTTCCCCS
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH--HHHHHHhcCCCCcC
Confidence 67899999999999999988762 459999999999999999999876655469999999743 11112111 26799
Q ss_pred EEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
+|++..... ....+++++.++|+|||++++..
T Consensus 136 ~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 136 FIFIDADKQ-------NNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp EEEECSCGG-------GHHHHHHHHHHTCCTTCEEEEES
T ss_pred EEEEcCCcH-------HHHHHHHHHHHhcCCCcEEEEeC
Confidence 998866433 35689999999999999998873
No 146
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.48 E-value=5.5e-15 Score=122.76 Aligned_cols=103 Identities=20% Similarity=0.185 Sum_probs=83.6
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
++.+|||+|||+|..+..++..+ .+|+|+|+|+.+++.|++++...+...++.++++|+.+.+ ++++||+|+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~~D~v~ 149 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-------SFLKADVVF 149 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-------GGCCCSEEE
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-------ccCCCCEEE
Confidence 68999999999999999998877 5999999999999999999887654347999999974422 357999999
Q ss_pred eccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+...+++ .......+.++.++|+|||.+++.
T Consensus 150 ~~~~~~~----~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 150 LSPPWGG----PDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp ECCCCSS----GGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred ECCCcCC----cchhhhHHHHHHhhcCCcceeHHH
Confidence 9887765 222334677899999999986543
No 147
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.48 E-value=4.7e-13 Score=111.18 Aligned_cols=123 Identities=9% Similarity=-0.065 Sum_probs=96.0
Q ss_pred HHHHHhcCCCCEEEEEcCCCCccHHHHHHcCC-CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh
Q 025059 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (258)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 101 (258)
..+..+++++.+|||||||+|..+..++..+. .+++++|+++.+++.|+++...++...++.+.++|+.+...
T Consensus 13 ~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~------ 86 (244)
T 3gnl_A 13 EKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE------ 86 (244)
T ss_dssp HHHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC------
T ss_pred HHHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccC------
Confidence 34567888999999999999999999988764 48999999999999999999888766579999999754321
Q ss_pred cCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCch-HHHHHHH
Q 025059 102 KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS-TIWAKYQ 157 (258)
Q Consensus 102 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~-~~~~~~~ 157 (258)
+..+||+|++... ..+....++....+.|+++|.||++..... .+.+.+.
T Consensus 87 ~~~~~D~Iviagm------Gg~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~ 137 (244)
T 3gnl_A 87 KKDAIDTIVIAGM------GGTLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSE 137 (244)
T ss_dssp GGGCCCEEEEEEE------CHHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHH
T ss_pred ccccccEEEEeCC------chHHHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHH
Confidence 2236999876432 245578899999999999999999865553 4443333
No 148
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.48 E-value=2.3e-13 Score=124.16 Aligned_cols=106 Identities=16% Similarity=0.092 Sum_probs=85.6
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||||||+|..+..++..+..+|+|+|+|+ +++.|+++....+...++.++++|+.+.++ .++||+|
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~-------~~~fD~I 228 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL-------PEQVDII 228 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC-------SSCEEEE
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCcc-------CCCeEEE
Confidence 36789999999999999988887667999999998 999999998877654579999999976543 3689999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
++...+++ +. .+.....+.++.++|+|||.+++.
T Consensus 229 vs~~~~~~-~~-~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 229 ISEPMGYM-LF-NERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp ECCCCHHH-HT-CHHHHHHHHHGGGGEEEEEEEESC
T ss_pred EEeCchHh-cC-cHHHHHHHHHHHHhcCCCCEEEEE
Confidence 99765443 22 244566777899999999999854
No 149
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.47 E-value=1.7e-14 Score=116.90 Aligned_cols=114 Identities=14% Similarity=0.049 Sum_probs=66.6
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCC-CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.++.+|||+|||+|..+..++.... .+++|+|+|+.+++.|+++....+. ++.++++|+.+ ++.. .....++||+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~-~~~~-~~~~~~~fD~ 104 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIE-WLIE-RAERGRPWHA 104 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHH-HHHH-HHHTTCCBSE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHh-hhhh-hhhccCcccE
Confidence 5788999999999999999988743 4999999999999999998876543 67788888644 2210 0002389999
Q ss_pred EEecccccccc----------------------CCHHHHHHHHHHHHhcccCCcE-EEEEEc
Q 025059 109 VCCFQHLQMCF----------------------ETEERARRLLQNVSSLLKPGGY-FLGITP 147 (258)
Q Consensus 109 V~~~~~l~~~~----------------------~~~~~~~~~l~~i~~~LkpgG~-~i~~~~ 147 (258)
|++....+..- ...+....+++++.++|+|||. +++..+
T Consensus 105 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 105 IVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp EEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred EEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 99964332110 0011127889999999999999 655544
No 150
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.47 E-value=2.4e-13 Score=111.68 Aligned_cols=105 Identities=15% Similarity=0.129 Sum_probs=83.3
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-CC-CeEEEEecChhHHHHHHHHHHhcCC----CceeEEEEcCCCCCchhhhhhhc
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-LI-ANYIGIDVATSGIGEARDTWENQRK----NFIAEFFEADPCAENFETQMQEK 102 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~~-~~v~gvD~s~~~l~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~ 102 (258)
..++.+|||+|||+|..+..++.. +. .+++++|+++.+++.|+++....+. ..++.+.++|+..... .
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------~ 148 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA------E 148 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG------G
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc------c
Confidence 568899999999999999888776 33 5999999999999999998876421 1268999999754332 3
Q ss_pred CCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
.++||+|++...++. ++.++.++|+|||.++++++..
T Consensus 149 ~~~fD~i~~~~~~~~----------~~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 149 EAPYDAIHVGAAAPV----------VPQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp GCCEEEEEECSBBSS----------CCHHHHHTEEEEEEEEEEESCT
T ss_pred CCCcCEEEECCchHH----------HHHHHHHhcCCCcEEEEEEecC
Confidence 568999999887654 2467889999999999986653
No 151
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.47 E-value=4.1e-13 Score=118.06 Aligned_cols=117 Identities=18% Similarity=0.161 Sum_probs=91.8
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcC--CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
.+++.+|||+|||+|.++..++... ..+++|+|+++.+++.|+++++..+.. ++.+.++|+.+.+. +...|
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~------~~~~~ 273 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPR------FFPEV 273 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGG------TCCCC
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCcc------ccCCC
Confidence 4578899999999999999888753 358999999999999999999887665 78999999866443 45679
Q ss_pred eEEEeccccccccCC----HHHHHHHHHHHHhcccCCcEEEEEEcCchHH
Q 025059 107 DLVCCFQHLQMCFET----EERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (258)
Q Consensus 107 D~V~~~~~l~~~~~~----~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~ 152 (258)
|+|+++......... ......+++++.++|+|||.+++.+++...+
T Consensus 274 D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~~ 323 (354)
T 3tma_A 274 DRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPALL 323 (354)
T ss_dssp SEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHHH
T ss_pred CEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHHH
Confidence 999996543321111 1234789999999999999999999886443
No 152
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.47 E-value=5.9e-13 Score=109.47 Aligned_cols=121 Identities=11% Similarity=-0.015 Sum_probs=94.2
Q ss_pred HHHHhcCCCCEEEEEcCCCCccHHHHHHcCC-CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhc
Q 025059 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (258)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (258)
.+..+++++.+|||||||+|..+..++..+. .+++++|+++.+++.|+++...++...++++.++|..+. + + +
T Consensus 8 ~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~-l----~-~ 81 (225)
T 3kr9_A 8 LVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA-F----E-E 81 (225)
T ss_dssp HHHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG-C----C-G
T ss_pred HHHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhh-c----c-c
Confidence 4567788999999999999999999988753 589999999999999999999887665799999997431 1 0 1
Q ss_pred CCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCch-HHHHHH
Q 025059 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS-TIWAKY 156 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~-~~~~~~ 156 (258)
..+||+|++..+ .......++......|+++|.+++...... .+.+.+
T Consensus 82 ~~~~D~IviaG~------Gg~~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L 130 (225)
T 3kr9_A 82 TDQVSVITIAGM------GGRLIARILEEGLGKLANVERLILQPNNREDDLRIWL 130 (225)
T ss_dssp GGCCCEEEEEEE------CHHHHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHH
T ss_pred CcCCCEEEEcCC------ChHHHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHH
Confidence 226999876542 234478899999999999999999865543 333333
No 153
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.47 E-value=3.2e-13 Score=111.01 Aligned_cols=108 Identities=12% Similarity=0.049 Sum_probs=84.0
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCC------CeEEEEecChhHHHHHHHHHHhcCC----CceeEEEEcCCCCCchhhh
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALI------ANYIGIDVATSGIGEARDTWENQRK----NFIAEFFEADPCAENFETQ 98 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~------~~v~gvD~s~~~l~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~~~ 98 (258)
..++.+|||+|||+|..+..++.... .+++|+|+++.+++.|+++....+. ..++.+.++|+........
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 56789999999999999988877642 4999999999999999999876531 1268999999865330000
Q ss_pred hhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 99 MQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 99 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
. ..++||+|++...++. ++.++.++|+|||.+++..+.
T Consensus 158 ~--~~~~fD~I~~~~~~~~----------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 158 K--ELGLFDAIHVGASASE----------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp H--HHCCEEEEEECSBBSS----------CCHHHHHHEEEEEEEEEEEEE
T ss_pred c--cCCCcCEEEECCchHH----------HHHHHHHhcCCCcEEEEEEcc
Confidence 1 3478999999887765 247788999999999998664
No 154
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.47 E-value=3.7e-13 Score=110.38 Aligned_cols=107 Identities=17% Similarity=0.092 Sum_probs=83.6
Q ss_pred CCCEEEEEcCCCCccHHHHHHc-C-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhc--CCce
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK--ANQA 106 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~f 106 (258)
++.+|||+|||+|..+..++.. + ..+++++|+++.+++.|++++...+...++.++++|+.+. .+.+... .++|
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~~f 141 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDT--LAELIHAGQAWQY 141 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH--HHHHHTTTCTTCE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHH--HHHhhhccCCCCc
Confidence 6789999999999999999876 2 4699999999999999999998776554699999997331 1111101 1789
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
|+|++... ......+++++.++|+|||++++..
T Consensus 142 D~v~~~~~-------~~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 142 DLIYIDAD-------KANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp EEEEECSC-------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cEEEECCC-------HHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 99986553 2336779999999999999999873
No 155
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.47 E-value=1.4e-13 Score=120.65 Aligned_cols=110 Identities=19% Similarity=0.075 Sum_probs=82.2
Q ss_pred HHHHh-cCCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh
Q 025059 24 LIKIY-SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (258)
Q Consensus 24 li~~~-~~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 101 (258)
++..+ .+++.+|||||||+|..+..++... ..+++++|++ .++. +++....+...++.++.+|+. .++
T Consensus 176 ~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~-~~~------ 245 (348)
T 3lst_A 176 LARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFL-REV------ 245 (348)
T ss_dssp HHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTT-TCC------
T ss_pred HHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCC-CCC------
Confidence 44443 3467899999999999999998763 3489999994 4444 222222222337999999986 333
Q ss_pred cCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 102 KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 102 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
+ +||+|++..++|+ .+.++...+++++.++|+|||.+++..+
T Consensus 246 p--~~D~v~~~~vlh~--~~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 246 P--HADVHVLKRILHN--WGDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp C--CCSEEEEESCGGG--SCHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred C--CCcEEEEehhccC--CCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 3 8999999999997 4566678999999999999999998743
No 156
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.47 E-value=4.4e-13 Score=116.90 Aligned_cols=127 Identities=16% Similarity=0.108 Sum_probs=92.0
Q ss_pred HHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCc-eeEEEEcCCCCCchh
Q 025059 18 EFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNF-IAEFFEADPCAENFE 96 (258)
Q Consensus 18 ~~~k~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~ 96 (258)
.|+...+.. ..++.+|||+|||+|.++..++..+. +++++|+|+.+++.|+++...++... ++.++++|+.+. .
T Consensus 142 ~~l~~~~~~--~~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~--l 216 (332)
T 2igt_A 142 EWLKNAVET--ADRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKF--I 216 (332)
T ss_dssp HHHHHHHHH--SSSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHH--H
T ss_pred HHHHHHHHh--cCCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHH--H
Confidence 455544321 34678999999999999999988777 99999999999999999988765432 489999997432 1
Q ss_pred hhhhhcCCceeEEEeccc---cc---cccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 97 TQMQEKANQADLVCCFQH---LQ---MCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 97 ~~~~~~~~~fD~V~~~~~---l~---~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
.......++||+|++... .. ..+........++..+.++|+|||.++++....
T Consensus 217 ~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 217 QREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred HHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 111112578999998432 11 012235677899999999999999987775443
No 157
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.46 E-value=2e-13 Score=114.34 Aligned_cols=105 Identities=13% Similarity=-0.006 Sum_probs=83.0
Q ss_pred CCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
++.+|||||||+|..+..++.. +..+|+++|+|+.+++.|+++....+.. ++.++++|+.+.+... ...++||+|
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~---~~~~~fD~I 155 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREA---GHREAYARA 155 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTST---TTTTCEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhccc---ccCCCceEE
Confidence 5789999999999998888776 4569999999999999999998877654 5899999974422100 024799999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
++.... ....+++.+.++|+|||.+++...
T Consensus 156 ~s~a~~--------~~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 156 VARAVA--------PLCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp EEESSC--------CHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred EECCcC--------CHHHHHHHHHHHcCCCeEEEEEeC
Confidence 986421 256889999999999999988753
No 158
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.46 E-value=5.4e-13 Score=111.55 Aligned_cols=108 Identities=16% Similarity=0.140 Sum_probs=88.2
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-C-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
..++.+|||+|||+|.++..++.. + ..+++++|+|+.+++.|++++...+...++.+.++|+.+. + ++++|
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~------~~~~~ 163 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-I------EEENV 163 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-C------CCCSE
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-c------CCCCc
Confidence 457899999999999999999887 3 4699999999999999999988765543599999998642 2 46789
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHH
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~ 152 (258)
|+|++... ....+++++.++|+|||.+++..+.....
T Consensus 164 D~v~~~~~---------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~ 200 (255)
T 3mb5_A 164 DHVILDLP---------QPERVVEHAAKALKPGGFFVAYTPCSNQV 200 (255)
T ss_dssp EEEEECSS---------CGGGGHHHHHHHEEEEEEEEEEESSHHHH
T ss_pred CEEEECCC---------CHHHHHHHHHHHcCCCCEEEEEECCHHHH
Confidence 99987432 23568999999999999999998876543
No 159
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.46 E-value=2.6e-13 Score=113.42 Aligned_cols=114 Identities=16% Similarity=0.064 Sum_probs=82.9
Q ss_pred CCCEEEEEcCCCCccHHHHHHc---CCCeEEEEecChhHHHHHHHHHHhc---CCCce----------------------
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA---LIANYIGIDVATSGIGEARDTWENQ---RKNFI---------------------- 82 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~---~~~~v~gvD~s~~~l~~a~~~~~~~---~~~~~---------------------- 82 (258)
++.+|||+|||+|.++..++.. +..+++|+|+|+.+++.|+++.... +...+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5679999999999999888775 2348999999999999999876543 11101
Q ss_pred ---eE-------------EEEcCCCCCchhhhhhhcCCceeEEEeccccccccC-----CHHHHHHHHHHHHhcccCCcE
Q 025059 83 ---AE-------------FFEADPCAENFETQMQEKANQADLVCCFQHLQMCFE-----TEERARRLLQNVSSLLKPGGY 141 (258)
Q Consensus 83 ---~~-------------~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~-----~~~~~~~~l~~i~~~LkpgG~ 141 (258)
+. +.++|+.+....... ....+||+|+|....++... ..+....+++++.++|+|||+
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAV-LAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHH-HTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhccccccccccceeecccccccccccc-cCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 55 999998652210000 01348999999865554221 246788999999999999999
Q ss_pred EEEE
Q 025059 142 FLGI 145 (258)
Q Consensus 142 ~i~~ 145 (258)
++++
T Consensus 210 l~~~ 213 (250)
T 1o9g_A 210 IAVT 213 (250)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9984
No 160
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.46 E-value=4.7e-13 Score=111.67 Aligned_cols=115 Identities=17% Similarity=0.159 Sum_probs=83.3
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCC-CeEEEEecChhHHHHHHHHHHhc--------CCCceeEEEEcCCCCCchhhhhh
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQ--------RKNFIAEFFEADPCAENFETQMQ 100 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~--------~~~~~~~~~~~d~~~~~~~~~~~ 100 (258)
+++.+|||||||+|.++..++.... ..++|+|+|+.+++.|+++.... +. .++.++++|+.+. +...+
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~-l~~~~- 124 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKF-LPNFF- 124 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSC-GGGTS-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHH-HHHhc-
Confidence 3678999999999999999988754 48999999999999999887653 32 2789999998651 11111
Q ss_pred hcCCceeEEEeccccccccCCHHH-----HHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 101 EKANQADLVCCFQHLQMCFETEER-----ARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 101 ~~~~~fD~V~~~~~l~~~~~~~~~-----~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
..+++|.|++.+.-.+ +..... ...++.++.++|+|||.+++.+...
T Consensus 125 -~~~~~d~v~~~~p~p~-~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~ 176 (246)
T 2vdv_E 125 -EKGQLSKMFFCFPDPH-FKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVK 176 (246)
T ss_dssp -CTTCEEEEEEESCCCC-------CSSCCCHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred -cccccCEEEEECCCcc-cccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccH
Confidence 4678999976542221 000000 1479999999999999999876553
No 161
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.46 E-value=3.6e-13 Score=110.01 Aligned_cols=112 Identities=13% Similarity=0.024 Sum_probs=79.2
Q ss_pred hcCCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHH----hcCCCceeEEEEcCCCCCchhhhhhhc
Q 025059 28 YSHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWE----NQRKNFIAEFFEADPCAENFETQMQEK 102 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (258)
...++.+|||+|||+|..+..++... ..+++|+|+|+.|++.+.++.. ..+. .++.++++|+.+.++ .
T Consensus 24 ~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l~~------~ 96 (218)
T 3mq2_A 24 RSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERLPP------L 96 (218)
T ss_dssp HTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTCCS------C
T ss_pred hccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhCCC------C
Confidence 35678999999999999999998874 4599999999999986443332 2222 268999999988665 3
Q ss_pred CCceeEEEecccccccc-CCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 103 ANQADLVCCFQHLQMCF-ETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~~-~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
++. |.|.+.+...... ....+...+++++.++|||||.++++..
T Consensus 97 ~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 97 SGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp CCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 455 7766433211100 0012237899999999999999998643
No 162
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.46 E-value=2.1e-13 Score=107.60 Aligned_cols=100 Identities=12% Similarity=0.124 Sum_probs=76.5
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||+|||+|.++..++..+ +++|+|+|+.|++. .. ++.++++|+.+ ++ ++++||+|
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~------~~----~~~~~~~d~~~-~~------~~~~fD~i 82 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES------HR----GGNLVRADLLC-SI------NQESVDVV 82 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT------CS----SSCEEECSTTT-TB------CGGGCSEE
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc------cc----CCeEEECChhh-hc------ccCCCCEE
Confidence 567899999999999999887766 99999999999987 11 67899999866 33 34799999
Q ss_pred EeccccccccC-----CHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 110 CCFQHLQMCFE-----TEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 110 ~~~~~l~~~~~-----~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+++..++..-. .......++.++.+.| |||.+++..+..
T Consensus 83 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~ 126 (170)
T 3q87_B 83 VFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA 126 (170)
T ss_dssp EECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG
T ss_pred EECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC
Confidence 99877663111 0112345777788888 999999986543
No 163
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.46 E-value=8.1e-13 Score=112.11 Aligned_cols=111 Identities=13% Similarity=0.093 Sum_probs=86.7
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.++.+|||+|||+|..+..++.. +..+++|+|+|+.+++.|+++....+.. ++.++++|+.+. + +.++||+
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~~-~------~~~~fD~ 179 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSA-L------AGQQFAM 179 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTGG-G------TTCCEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhhh-c------ccCCccE
Confidence 56789999999999999988865 4469999999999999999998776543 689999998542 2 3578999
Q ss_pred EEecccccccc-----------CC----------HHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 109 VCCFQHLQMCF-----------ET----------EERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 109 V~~~~~l~~~~-----------~~----------~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|++....+..- ++ ......++.++.++|+|||.+++..+.
T Consensus 180 Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~ 240 (276)
T 2b3t_A 180 IVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW 240 (276)
T ss_dssp EEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS
T ss_pred EEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc
Confidence 99974332210 11 145688999999999999999998543
No 164
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.46 E-value=5.9e-13 Score=110.18 Aligned_cols=107 Identities=13% Similarity=0.041 Sum_probs=78.3
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
..|+.+|||+|||+|..+..++.. +.++|+|+|+|+.|++...+...... ++.++++|+........ ..++|
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~---nv~~i~~Da~~~~~~~~---~~~~~ 147 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRP---NIFPLLADARFPQSYKS---VVENV 147 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCT---TEEEEECCTTCGGGTTT---TCCCE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcC---CeEEEEcccccchhhhc---cccce
Confidence 458999999999999999888775 35699999999999765544443322 78999999876432111 24689
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
|+|++..+. ......+..++.+.|||||.+++.+.
T Consensus 148 D~I~~d~a~------~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 148 DVLYVDIAQ------PDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp EEEEECCCC------TTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEEecCCC------hhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 999987643 22344455667779999999999854
No 165
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.46 E-value=3.1e-13 Score=111.20 Aligned_cols=103 Identities=14% Similarity=0.088 Sum_probs=82.0
Q ss_pred CCEEEEEcCCCCccHHHHHHc-C-CCeEEEEecChhHHHHHHHHHHhcCCC-ceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 32 YVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKN-FIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
+.+|||||||+|..+..++.. + .++++++|+|+.+++.|+++++..+.. .++.++++|+.+. .+.+ .+++||+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~--l~~~--~~~~fD~ 132 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDV--MSRL--ANDSYQL 132 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH--GGGS--CTTCEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHH--HHHh--cCCCcCe
Confidence 349999999999999988875 2 469999999999999999999876654 4799999986431 1111 2579999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|++..... ....+++.+.++|+|||++++.
T Consensus 133 V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 133 VFGQVSPM-------DLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp EEECCCTT-------THHHHHHHHHHHEEEEEEEEET
T ss_pred EEEcCcHH-------HHHHHHHHHHHHcCCCcEEEEe
Confidence 98865433 3567899999999999999985
No 166
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.46 E-value=8.2e-13 Score=118.56 Aligned_cols=110 Identities=16% Similarity=0.103 Sum_probs=83.1
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHH-------HHHHHhcCCC-ceeEEEEcCCCCCchhhhh
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEA-------RDTWENQRKN-FIAEFFEADPCAENFETQM 99 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a-------~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~ 99 (258)
..++.+|||||||+|..+..++.. +..+++|+|+++.+++.| ++++...+.. .++.++++|....+.. +
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~--~ 317 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNR--V 317 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHH--H
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccc--c
Confidence 457899999999999999998875 555899999999999988 7777665421 3789998865432110 1
Q ss_pred hhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 100 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
....++||+|+++..++ .++...++.++.++|+|||.+++.
T Consensus 318 ~~~~~~FDvIvvn~~l~-----~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 318 AELIPQCDVILVNNFLF-----DEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHHGGGCSEEEECCTTC-----CHHHHHHHHHHHTTCCTTCEEEES
T ss_pred ccccCCCCEEEEeCccc-----cccHHHHHHHHHHhCCCCeEEEEe
Confidence 01236899999875442 245778899999999999999886
No 167
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.45 E-value=3.8e-13 Score=116.55 Aligned_cols=103 Identities=12% Similarity=0.010 Sum_probs=83.8
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCC--CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALI--ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
..++.+|||||||+|..+..++.... .+|+|+|+|+.+++.|+++....+.. ++.+.++|+.+... ..++|
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~~~------~~~~f 145 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGYYGVP------EFSPY 145 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCG------GGCCE
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChhhccc------cCCCe
Confidence 45789999999999999988877632 47999999999999999998776543 48999999855332 35789
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|+|++..+++++. +++.++|+|||.+++....
T Consensus 146 D~Iv~~~~~~~~~----------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 146 DVIFVTVGVDEVP----------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp EEEEECSBBSCCC----------HHHHHHEEEEEEEEEEBCB
T ss_pred EEEEEcCCHHHHH----------HHHHHhcCCCcEEEEEECC
Confidence 9999999888632 5678899999999998544
No 168
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.45 E-value=5.4e-13 Score=110.19 Aligned_cols=106 Identities=16% Similarity=0.155 Sum_probs=84.8
Q ss_pred CCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
++.+|||+|||+|..+..++... ..+++++|+++.+++.|++++...+...++.+.++|+..... ... .+++||+|
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~-~~~~fD~I 130 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGE--KLE-LYPLFDVL 130 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHH--HHT-TSCCEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH--hcc-cCCCccEE
Confidence 67899999999999999888763 469999999999999999998876554468999999754211 110 15789999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
++....+ ....+++++.++|+|||.+++..
T Consensus 131 ~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 131 FIDAAKG-------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEGGGS-------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred EECCCHH-------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 9876544 36789999999999999999873
No 169
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.45 E-value=2.7e-13 Score=115.06 Aligned_cols=106 Identities=14% Similarity=0.067 Sum_probs=86.4
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhc-CCCceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQ-RKNFIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
..++.+|||+|||+|..+..++.. +..+++|+|+++.+++.|++++... +. .++.+.++|+.+ .+ ++++
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~-~~------~~~~ 179 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIAD-FI------SDQM 179 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTT-CC------CSCC
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhc-cC------cCCC
Confidence 347889999999999999998876 3459999999999999999998765 42 268999999866 33 4578
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchH
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSST 151 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~ 151 (258)
||+|++.. ++...+++++.++|+|||.+++.+++...
T Consensus 180 fD~Vi~~~---------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 216 (275)
T 1yb2_A 180 YDAVIADI---------PDPWNHVQKIASMMKPGSVATFYLPNFDQ 216 (275)
T ss_dssp EEEEEECC---------SCGGGSHHHHHHTEEEEEEEEEEESSHHH
T ss_pred ccEEEEcC---------cCHHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 99998732 12357899999999999999999888643
No 170
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.44 E-value=1e-12 Score=109.85 Aligned_cols=109 Identities=13% Similarity=0.074 Sum_probs=88.4
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-C-CCeEEEEecChhHHHHHHHHHHhc-CCCceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQ-RKNFIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
..++.+|||+|||+|.++..++.. + ..+++++|+++.+++.|++++... + ..++.+.++|+.+.++ ++++
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~------~~~~ 166 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAEL------EEAA 166 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCC------CTTC
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCC------CCCC
Confidence 458899999999999999998887 4 469999999999999999988765 3 2378999999866544 4578
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHHH
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIW 153 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~ 153 (258)
||+|++... +...++.++.++|+|||.+++..+....+.
T Consensus 167 ~D~v~~~~~---------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~ 205 (258)
T 2pwy_A 167 YDGVALDLM---------EPWKVLEKAALALKPDRFLVAYLPNITQVL 205 (258)
T ss_dssp EEEEEEESS---------CGGGGHHHHHHHEEEEEEEEEEESCHHHHH
T ss_pred cCEEEECCc---------CHHHHHHHHHHhCCCCCEEEEEeCCHHHHH
Confidence 999987321 234789999999999999999988875443
No 171
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.44 E-value=6.6e-13 Score=109.17 Aligned_cols=106 Identities=17% Similarity=0.102 Sum_probs=82.1
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-C-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
..++.+|||+|||+|.++..++.. + ..+++|+|+|+.|++.++++.... .++.++++|+.+...... ..++|
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~---~~~~~ 144 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRA---LVPKV 144 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTT---TCCCE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhc---ccCCc
Confidence 347889999999999999998876 3 369999999999999998887654 278999999876321111 24589
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
|+|++... .......++.++.++|+|||.+++..
T Consensus 145 D~v~~~~~------~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 145 DVIFEDVA------QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp EEEEECCC------STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCC------CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99997653 12334566999999999999999873
No 172
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.44 E-value=7.8e-13 Score=112.11 Aligned_cols=111 Identities=15% Similarity=0.082 Sum_probs=89.0
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhc-C-CCceeEEEEcCCCCCchhhhhhhcCC
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQ-R-KNFIAEFFEADPCAENFETQMQEKAN 104 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~-~-~~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (258)
..++.+|||+|||+|.++..++.. +..+++++|+++.+++.|+++.... + ...++.+.++|+.+.++ +++
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~------~~~ 170 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL------PDG 170 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC------CTT
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC------CCC
Confidence 458899999999999999998875 3469999999999999999988765 2 22378999999866544 467
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHHHH
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWA 154 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~~ 154 (258)
+||+|++... +...++.++.++|+|||.+++..+....+.+
T Consensus 171 ~~D~v~~~~~---------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~ 211 (280)
T 1i9g_A 171 SVDRAVLDML---------APWEVLDAVSRLLVAGGVLMVYVATVTQLSR 211 (280)
T ss_dssp CEEEEEEESS---------CGGGGHHHHHHHEEEEEEEEEEESSHHHHHH
T ss_pred ceeEEEECCc---------CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHH
Confidence 8999988431 1347899999999999999999988765443
No 173
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.44 E-value=1.1e-12 Score=114.35 Aligned_cols=115 Identities=17% Similarity=0.053 Sum_probs=86.0
Q ss_pred hcCCCCEEEEEcCCCCccHHHHHHc-CC-CeEEEEecChhHHHHHHHHHHhcC----------CCceeEEEEcCCCCCch
Q 025059 28 YSHPYVTVCDLYCGAGVDVDKWETA-LI-ANYIGIDVATSGIGEARDTWENQR----------KNFIAEFFEADPCAENF 95 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~~~~~-~~-~~v~gvD~s~~~l~~a~~~~~~~~----------~~~~~~~~~~d~~~~~~ 95 (258)
...++.+|||+|||+|.++..++.. +. .+++|+|+++.+++.|+++....+ ...++.+.++|+.+...
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~ 181 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE 181 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc
Confidence 3568899999999999999998876 44 699999999999999999887421 11278999999876421
Q ss_pred hhhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHHHHH
Q 025059 96 ETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAK 155 (258)
Q Consensus 96 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~~~ 155 (258)
.+ ++++||+|++..... ..++.++.++|+|||.+++..++...+...
T Consensus 182 --~~--~~~~fD~V~~~~~~~---------~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~ 228 (336)
T 2b25_A 182 --DI--KSLTFDAVALDMLNP---------HVTLPVFYPHLKHGGVCAVYVVNITQVIEL 228 (336)
T ss_dssp ----------EEEEEECSSST---------TTTHHHHGGGEEEEEEEEEEESSHHHHHHH
T ss_pred --cc--CCCCeeEEEECCCCH---------HHHHHHHHHhcCCCcEEEEEeCCHHHHHHH
Confidence 01 356899998854322 237899999999999999998887655443
No 174
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.43 E-value=6.5e-13 Score=109.98 Aligned_cols=104 Identities=13% Similarity=0.102 Sum_probs=82.9
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|..+..++.....+++++|+++.+++.|+++....+.. ++.+.++|+ ..++. ...+||+
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~-~~~~~-----~~~~fD~ 161 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDG-SKGFP-----PKAPYDV 161 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCG-GGCCG-----GGCCEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCc-ccCCC-----CCCCccE
Confidence 4578899999999999999888764268999999999999999998766543 588999996 22221 2346999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
|++..++++.. .++.++|+|||.+++.+++.
T Consensus 162 Ii~~~~~~~~~----------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 162 IIVTAGAPKIP----------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp EEECSBBSSCC----------HHHHHTEEEEEEEEEEECSS
T ss_pred EEECCcHHHHH----------HHHHHhcCCCcEEEEEEecC
Confidence 99998887632 36789999999999998765
No 175
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.43 E-value=2.6e-12 Score=106.73 Aligned_cols=108 Identities=11% Similarity=0.057 Sum_probs=87.6
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||+|||+|..+..++.. ..+++++|+++.+++.|+++....+...++.+.++|+.+..+ +++.||+|
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~~D~v 162 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV------PEGIFHAA 162 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC------CTTCBSEE
T ss_pred CCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc------CCCcccEE
Confidence 47899999999999999998887 559999999999999999998776543478999999866332 24689999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHHH
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIW 153 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~ 153 (258)
++... +...+++++.++|+|||.+++..+....+.
T Consensus 163 ~~~~~---------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~ 197 (248)
T 2yvl_A 163 FVDVR---------EPWHYLEKVHKSLMEGAPVGFLLPTANQVI 197 (248)
T ss_dssp EECSS---------CGGGGHHHHHHHBCTTCEEEEEESSHHHHH
T ss_pred EECCc---------CHHHHHHHHHHHcCCCCEEEEEeCCHHHHH
Confidence 87431 235678999999999999999998765443
No 176
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.43 E-value=5.8e-13 Score=107.26 Aligned_cols=109 Identities=11% Similarity=0.086 Sum_probs=77.7
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-C--CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCc-----------
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-L--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAEN----------- 94 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~----------- 94 (258)
++++.+|||+|||+|..+..++.. + ..+++|+|+|+.+ .. .++.++++|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~~---~~v~~~~~d~~~~~~~~~~~~~~i~ 87 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------PI---PNVYFIQGEIGKDNMNNIKNINYID 87 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------CC---TTCEEEECCTTTTSSCCC-------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------CC---CCceEEEccccchhhhhhccccccc
Confidence 467899999999999999999876 3 3689999999842 01 16789999987654
Q ss_pred ------hhhhhh--hcCCceeEEEeccccccccCCHHH-------HHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 95 ------FETQMQ--EKANQADLVCCFQHLQMCFETEER-------ARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 95 ------~~~~~~--~~~~~fD~V~~~~~l~~~~~~~~~-------~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
....+. -++++||+|++..++++.-....+ ...++.++.++|+|||.+++.+...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 88 NMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp ----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred cccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC
Confidence 000000 145799999998876642111111 2358899999999999999976654
No 177
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.43 E-value=5.2e-13 Score=117.86 Aligned_cols=107 Identities=14% Similarity=0.198 Sum_probs=81.3
Q ss_pred HHHHhcCCCCEEEEEcCC------CCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCch
Q 025059 24 LIKIYSHPYVTVCDLYCG------AGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (258)
Q Consensus 24 li~~~~~~~~~VLDlGcG------~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (258)
++..+..++.+||||||| +|+.+..+... +..+++|+|+|+.|. . . ..++.|+++|+.+.++
T Consensus 209 lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~-~---~~rI~fv~GDa~dlpf 278 (419)
T 3sso_A 209 HFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V-D---ELRIRTIQGDQNDAEF 278 (419)
T ss_dssp HHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G-C---BTTEEEEECCTTCHHH
T ss_pred HHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h-c---CCCcEEEEecccccch
Confidence 344455577899999999 77767666654 456999999999983 1 1 1279999999988766
Q ss_pred hhhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 96 ETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 96 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
...+...+++||+|++.. .|+ ..+...+++++.++|||||++++.
T Consensus 279 ~~~l~~~d~sFDlVisdg-sH~----~~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 279 LDRIARRYGPFDIVIDDG-SHI----NAHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHHHHHCCEEEEEECS-CCC----HHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhhhhcccCCccEEEECC-ccc----chhHHHHHHHHHHhcCCCeEEEEE
Confidence 433322358999999875 354 567889999999999999999997
No 178
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.43 E-value=2e-12 Score=110.82 Aligned_cols=111 Identities=12% Similarity=0.109 Sum_probs=81.5
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcC----CCceeEEEEcCCCCCchhhhhhhcC
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQR----KNFIAEFFEADPCAENFETQMQEKA 103 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (258)
.+++.+|||||||+|..+..+++. +..+++++|+++.+++.|++++.... ...+++++++|+.... ....
T Consensus 81 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l-----~~~~ 155 (294)
T 3adn_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFV-----NQTS 155 (294)
T ss_dssp STTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC--------CCC
T ss_pred CCCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHH-----hhcC
Confidence 345689999999999999999887 45689999999999999999876431 1237899999985521 1135
Q ss_pred CceeEEEeccccccccCCHHHH--HHHHHHHHhcccCCcEEEEEE
Q 025059 104 NQADLVCCFQHLQMCFETEERA--RRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~--~~~l~~i~~~LkpgG~~i~~~ 146 (258)
++||+|++....+. .....+ ..+++.+.++|+|||++++..
T Consensus 156 ~~fDvIi~D~~~p~--~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 156 QTFDVIISDCTDPI--GPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CCEEEEEECC------------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEECCCCcc--CcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 78999998654332 112222 789999999999999999985
No 179
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.42 E-value=9e-13 Score=112.52 Aligned_cols=111 Identities=15% Similarity=0.059 Sum_probs=84.0
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce---e
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA---D 107 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f---D 107 (258)
++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++....+...++.++++|+.+ .+ .++| |
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~-~~-------~~~f~~~D 194 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE-PF-------KEKFASIE 194 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG-GG-------GGGTTTCC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh-hc-------ccccCCCC
Confidence 56799999999999999988774459999999999999999999877654469999999865 22 1468 9
Q ss_pred EEEecccccc--------c-cCCHHH------HHHHHHHHH-hcccCCcEEEEEEcCc
Q 025059 108 LVCCFQHLQM--------C-FETEER------ARRLLQNVS-SLLKPGGYFLGITPDS 149 (258)
Q Consensus 108 ~V~~~~~l~~--------~-~~~~~~------~~~~l~~i~-~~LkpgG~~i~~~~~~ 149 (258)
+|+++-.... + ++.... ...+++++. +.|+|||.+++.+...
T Consensus 195 ~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~ 252 (284)
T 1nv8_A 195 MILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGED 252 (284)
T ss_dssp EEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTT
T ss_pred EEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence 9999621110 0 121111 127899999 9999999999986554
No 180
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.42 E-value=7.9e-13 Score=103.49 Aligned_cols=110 Identities=18% Similarity=0.085 Sum_probs=81.4
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-CC-CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhh--hcCC
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-LI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ--EKAN 104 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~ 104 (258)
..++.+|||+|||+|..+..++.. +. .+++|+|+++ +++. .++.+.++|+.+.+..+.++ -+++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERVGDS 87 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHHTTC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccCCCC
Confidence 457889999999999999988877 33 6999999999 7542 16889999987754111111 1467
Q ss_pred ceeEEEeccccccccCCH-HH------HHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 105 QADLVCCFQHLQMCFETE-ER------ARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~-~~------~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
+||+|++...+++.-... .. ...+++++.++|+|||.+++..+...
T Consensus 88 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred ceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 999999987776422211 11 16899999999999999999877654
No 181
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.42 E-value=9.6e-13 Score=106.98 Aligned_cols=102 Identities=14% Similarity=0.085 Sum_probs=80.7
Q ss_pred CCCEEEEEcCCCCccHHHHHHc-C-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
++.+|||+|||+|..+..++.. + ..+++++|+|+.+++.|++++...+...++.++++|+.+. ++..++ ||+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~-fD~ 129 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI-----AAGQRD-IDI 129 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH-----HTTCCS-EEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH-----hccCCC-CCE
Confidence 5689999999999999988776 2 4699999999999999999987665444689999996331 111245 999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|++.... .....+++++.++|+|||++++.
T Consensus 130 v~~~~~~-------~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 130 LFMDCDV-------FNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp EEEETTT-------SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEcCCh-------hhhHHHHHHHHHhcCCCeEEEEE
Confidence 9876432 23678899999999999999885
No 182
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.42 E-value=4e-13 Score=112.09 Aligned_cols=106 Identities=12% Similarity=0.048 Sum_probs=83.6
Q ss_pred CCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cCCce
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KANQA 106 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~f 106 (258)
++.+|||||||+|..+..++.. ..++|+++|+++.+++.|+++++..+...++.++++|+.+. .+.+.. ..++|
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~--l~~~~~~~~~~~f 137 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDT--LHSLLNEGGEHQF 137 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHH--HHHHHHHHCSSCE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--HHHHhhccCCCCE
Confidence 5689999999999999998875 24699999999999999999998776555799999997431 111110 14799
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|+|++... ......+++++.++|+|||++++.
T Consensus 138 D~V~~d~~-------~~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 138 DFIFIDAD-------KTNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEEEEESC-------GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEcCC-------hHHhHHHHHHHHHhcCCCeEEEEE
Confidence 99987653 233667899999999999999986
No 183
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.42 E-value=6.8e-12 Score=110.26 Aligned_cols=103 Identities=23% Similarity=0.285 Sum_probs=85.3
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCC-CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
+..+|||||||+|..+..+++..+ .+++..|. +.+++.|+++..... ..+++++.+|+...+. ..+|+|
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~--------~~~D~~ 248 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPL--------PEADLY 248 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSCC--------CCCSEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCCC--------CCceEE
Confidence 567999999999999999988743 47888887 889999988875433 3389999999876443 457999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
++..++|+ .+.++...+|+++++.|+|||.+++.
T Consensus 249 ~~~~vlh~--~~d~~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 249 ILARVLHD--WADGKCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp EEESSGGG--SCHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred Eeeeeccc--CCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 99999997 56778899999999999999999887
No 184
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.41 E-value=1.2e-12 Score=116.90 Aligned_cols=124 Identities=17% Similarity=0.101 Sum_probs=93.6
Q ss_pred HHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcC
Q 025059 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (258)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (258)
++....+++.+|||+|||+|.++..++..+..+++|+|+|+.+++.|++++..++...++.++++|+.+. ...+....
T Consensus 210 ~~~~~~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~--~~~~~~~~ 287 (396)
T 2as0_A 210 ALEKWVQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEE--MEKLQKKG 287 (396)
T ss_dssp HHGGGCCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH--HHHHHHTT
T ss_pred HHHHHhhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHH--HHHHHhhC
Confidence 3444555789999999999999999988766699999999999999999998776544789999997442 11121135
Q ss_pred CceeEEEeccccc-----cccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 104 NQADLVCCFQHLQ-----MCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 104 ~~fD~V~~~~~l~-----~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
++||+|++..... ..+........++.++.++|+|||.+++.+.+.
T Consensus 288 ~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 288 EKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 7899999853211 111123567889999999999999999887765
No 185
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.41 E-value=1.4e-13 Score=117.42 Aligned_cols=99 Identities=10% Similarity=0.006 Sum_probs=73.5
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeE-EEEcCCCCCchhhhhhhcCCceeEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAE-FFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
++.+|||+|||||.++..++..+..+|+|+|+|+.|++.+.++.+ ++. +...|+...... .+ +..+||+|
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~------rv~~~~~~ni~~l~~~-~l--~~~~fD~v 155 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDD------RVRSMEQYNFRYAEPV-DF--TEGLPSFA 155 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCT------TEEEECSCCGGGCCGG-GC--TTCCCSEE
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCc------ccceecccCceecchh-hC--CCCCCCEE
Confidence 578999999999999999988877799999999999998543211 222 222343222211 11 33459999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
++..+++. +..++.++.++|+|||.+++.
T Consensus 156 ~~d~sf~s-------l~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 156 SIDVSFIS-------LNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp EECCSSSC-------GGGTHHHHHHHSCTTCEEEEE
T ss_pred EEEeeHhh-------HHHHHHHHHHHcCcCCEEEEE
Confidence 99887665 478999999999999999887
No 186
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.41 E-value=8.1e-13 Score=108.77 Aligned_cols=104 Identities=11% Similarity=0.081 Sum_probs=81.6
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-C------CCeEEEEecChhHHHHHHHHHHhcCC----CceeEEEEcCCCCCchhh
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-L------IANYIGIDVATSGIGEARDTWENQRK----NFIAEFFEADPCAENFET 97 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~------~~~v~gvD~s~~~l~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~~ 97 (258)
..++.+|||+|||+|..+..++.. + ..+++++|+++.+++.|+++....+. ..++.+.++|+.. .+.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~- 159 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYP- 159 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCG-
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCC-
Confidence 567899999999999999888774 3 25899999999999999998765320 1168999999754 221
Q ss_pred hhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 98 QMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 98 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
..++||+|++..+++.+ ..++.++|+|||.+++.+..
T Consensus 160 ----~~~~fD~I~~~~~~~~~----------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 160 ----PNAPYNAIHVGAAAPDT----------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp ----GGCSEEEEEECSCBSSC----------CHHHHHTEEEEEEEEEEESC
T ss_pred ----cCCCccEEEECCchHHH----------HHHHHHHhcCCCEEEEEEec
Confidence 23789999999887763 26789999999999998654
No 187
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.41 E-value=1.7e-12 Score=110.55 Aligned_cols=112 Identities=15% Similarity=0.027 Sum_probs=82.0
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEec-ChhHHHHHHHHH-----HhcCCC----ceeEEEEcCCCCCchhhhh
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDV-ATSGIGEARDTW-----ENQRKN----FIAEFFEADPCAENFETQM 99 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~-s~~~l~~a~~~~-----~~~~~~----~~~~~~~~d~~~~~~~~~~ 99 (258)
.++.+|||||||+|..+..++..+..+|+|+|+ |+.+++.|+++. ...+.. .++.+...|..+..- ...
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPD-SLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTH-HHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccH-HHH
Confidence 467899999999999998888777669999999 899999999988 333221 257777666544211 111
Q ss_pred hh-cCCceeEEEeccccccccCCHHHHHHHHHHHHhccc---C--CcEEEEEE
Q 025059 100 QE-KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLK---P--GGYFLGIT 146 (258)
Q Consensus 100 ~~-~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk---p--gG~~i~~~ 146 (258)
.. ..++||+|++..++++ .+....+++.+.++|+ | ||.+++..
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~----~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSF----HQAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HHHSCSSBSEEEEESCCSC----GGGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred hhccCCCCCEEEEeCcccC----hHHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 00 2578999999877665 5567889999999999 9 99877663
No 188
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.40 E-value=2.3e-12 Score=106.94 Aligned_cols=108 Identities=15% Similarity=0.123 Sum_probs=84.0
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcC--CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh------
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE------ 101 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------ 101 (258)
.++.+|||||||+|..+..++... ..+++++|+++.+++.|++++...+...++.+.++|+.+. .+.+..
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~--~~~~~~~~~~~~ 136 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALET--LQVLIDSKSAPS 136 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH--HHHHHHCSSCCG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHH--HHHHHhhccccc
Confidence 367899999999999999988773 4699999999999999999987765444689999986431 111110
Q ss_pred -----c-C-CceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 102 -----K-A-NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 102 -----~-~-~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
+ + ++||+|++..... ....+++++.++|+|||++++..
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDADKE-------NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccccCCCCCcCEEEEeCCHH-------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 2 7899999876433 35688999999999999999874
No 189
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.40 E-value=2.7e-12 Score=114.27 Aligned_cols=119 Identities=11% Similarity=0.024 Sum_probs=88.1
Q ss_pred HHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhc
Q 025059 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (258)
Q Consensus 23 ~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (258)
.++..+++++.+|||+|||+|.++..++..+. .|+++|+|+.+++.|++++..++.. ..+.++|+.+. +...
T Consensus 206 ~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~ng~~--~~~~~~D~~~~-----l~~~ 277 (393)
T 4dmg_A 206 RLFEAMVRPGERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALRLGLR--VDIRHGEALPT-----LRGL 277 (393)
T ss_dssp HHHHTTCCTTCEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCC--CEEEESCHHHH-----HHTC
T ss_pred HHHHHHhcCCCeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHhCCC--CcEEEccHHHH-----HHHh
Confidence 44556667799999999999999999988776 5999999999999999999877543 35668886431 1111
Q ss_pred CCceeEEEeccccc-----cccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 103 ANQADLVCCFQHLQ-----MCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 103 ~~~fD~V~~~~~l~-----~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
.+.||+|++..... ...........++..+.++|+|||.+++.+.+.
T Consensus 278 ~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 278 EGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp CCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred cCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 34499999854320 011123456789999999999999999776654
No 190
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.40 E-value=2.4e-12 Score=107.65 Aligned_cols=106 Identities=10% Similarity=0.041 Sum_probs=83.2
Q ss_pred CCCEEEEEcCCCCccHHHHHHc-C-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh---cCCc
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE---KANQ 105 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~ 105 (258)
++.+|||||||+|..+..++.. + ..+++++|+++.+++.|+++++..+...++.++++|+.+ ..+.+.. ..++
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~--~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALP--VLDEMIKDEKNHGS 156 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHH--HHHHHHHSGGGTTC
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHH--HHHHHHhccCCCCC
Confidence 5689999999999999988876 2 469999999999999999999876654579999999743 1111110 1578
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
||+|++.... .....+++++.++|+|||++++.
T Consensus 157 fD~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 157 YDFIFVDADK-------DNYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp BSEEEECSCS-------TTHHHHHHHHHHHBCTTCCEEEE
T ss_pred EEEEEEcCch-------HHHHHHHHHHHHhCCCCeEEEEe
Confidence 9999886532 23678899999999999999986
No 191
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.39 E-value=1e-12 Score=113.28 Aligned_cols=113 Identities=13% Similarity=0.058 Sum_probs=82.4
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHh---cCCCceeEEEEcCCCCCchhhhhhh-cCC
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWEN---QRKNFIAEFFEADPCAENFETQMQE-KAN 104 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~-~~~ 104 (258)
+++.+|||||||+|..+..+++. +..+++++|+|+.+++.|+++++. .....++.++++|+.... .. .++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~-----~~~~~~ 168 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFV-----RQTPDN 168 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHH-----HSSCTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHH-----HhccCC
Confidence 46789999999999999999876 356999999999999999998742 111226899999974321 11 257
Q ss_pred ceeEEEeccccccccCCHHHH--HHHHHHHHhcccCCcEEEEEEcCc
Q 025059 105 QADLVCCFQHLQMCFETEERA--RRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~--~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+||+|++....+. .....+ ..+++++.++|+|||++++...+.
T Consensus 169 ~fDvIi~d~~~~~--~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 213 (304)
T 3bwc_A 169 TYDVVIIDTTDPA--GPASKLFGEAFYKDVLRILKPDGICCNQGESI 213 (304)
T ss_dssp CEEEEEEECC-----------CCHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred ceeEEEECCCCcc--ccchhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 8999998654432 112222 689999999999999999986553
No 192
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.39 E-value=8e-13 Score=123.23 Aligned_cols=129 Identities=16% Similarity=0.126 Sum_probs=89.5
Q ss_pred CcchHHhHHHHHHHHH--HHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEE
Q 025059 9 SELTHHRLYEFAKTAL--IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFF 86 (258)
Q Consensus 9 ~~~~~~~~~~~~k~~l--i~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~ 86 (258)
++....|+ ++++..+ +...+..+.+|||||||+|.++..+++.+. .|+|+|+|+.+|+.|+.+....+. .++.|.
T Consensus 43 ~r~~~~r~-~~i~~~~~~~~~~~~~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~-~~~~~~ 119 (569)
T 4azs_A 43 ARDCNQRL-DLITEQYDNLSRALGRPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPD-FAAEFR 119 (569)
T ss_dssp SBCCHHHH-HHHHHHHHHHHHHHTSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTT-SEEEEE
T ss_pred ccchHHHH-HHHHHHHHHHHhhcCCCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCC-CceEEE
Confidence 44455553 3333321 233344678999999999999999999887 899999999999999999876542 278999
Q ss_pred EcCCCCCchhhhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 87 EADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 87 ~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
++++.+.. ... .+++||+|+|..+++++.. ......+..+.+.|+++|..++..
T Consensus 120 ~~~~~~~~--~~~--~~~~fD~v~~~e~~ehv~~--~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 120 VGRIEEVI--AAL--EEGEFDLAIGLSVFHHIVH--LHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp ECCHHHHH--HHC--CTTSCSEEEEESCHHHHHH--HHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred ECCHHHHh--hhc--cCCCccEEEECcchhcCCC--HHHHHHHHHHHHHhccccceeeEE
Confidence 99974421 111 4679999999999987321 222233445667777777665553
No 193
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.38 E-value=3.5e-12 Score=108.19 Aligned_cols=108 Identities=13% Similarity=0.054 Sum_probs=87.2
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-C-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
..++.+|||+|||+|..+..++.. + ..+++++|+|+.+++.|+++....+...++.+.++|+.+. + ++++|
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~------~~~~~ 182 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-F------DEKDV 182 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-C------SCCSE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-c------cCCcc
Confidence 457899999999999999988877 4 4699999999999999999987765434789999997543 2 45789
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHH
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~ 152 (258)
|+|++... ....++.++.++|+|||.+++..+....+
T Consensus 183 D~V~~~~~---------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 219 (277)
T 1o54_A 183 DALFLDVP---------DPWNYIDKCWEALKGGGRFATVCPTTNQV 219 (277)
T ss_dssp EEEEECCS---------CGGGTHHHHHHHEEEEEEEEEEESSHHHH
T ss_pred CEEEECCc---------CHHHHHHHHHHHcCCCCEEEEEeCCHHHH
Confidence 99987431 23478899999999999999998875433
No 194
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.38 E-value=3.5e-12 Score=107.57 Aligned_cols=112 Identities=11% Similarity=0.097 Sum_probs=82.5
Q ss_pred CEEEEEcCCC--CccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cCCce
Q 025059 33 VTVCDLYCGA--GVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KANQA 106 (258)
Q Consensus 33 ~~VLDlGcG~--G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~f 106 (258)
..|||||||+ ++++..++.. +..+|+++|.|+.|++.|++++.... ..++.|+++|+.+... .+.. ....|
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~--~l~~~~~~~~~ 156 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPAS--ILDAPELRDTL 156 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHH--HHTCHHHHTTC
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhh--hhccccccccc
Confidence 6899999997 5666666553 45699999999999999999987542 1278999999976421 1110 02345
Q ss_pred e-----EEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 107 D-----LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 107 D-----~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
| .|+++.++|++ ...+....++..+.+.|+|||+|+++...
T Consensus 157 D~~~p~av~~~avLH~l-~d~~~p~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 157 DLTRPVALTVIAIVHFV-LDEDDAVGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp CTTSCCEEEEESCGGGS-CGGGCHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred CcCCcchHHhhhhHhcC-CchhhHHHHHHHHHHhCCCCcEEEEEecc
Confidence 5 57788899983 22333678999999999999999998443
No 195
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.38 E-value=2.9e-12 Score=102.99 Aligned_cols=110 Identities=14% Similarity=0.094 Sum_probs=78.6
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--c---C
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--K---A 103 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~---~ 103 (258)
.+++.+|||||||+|.++..++.. ..+|+|+|+++... ..++.++++|+.+......+.. . .
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~~------------~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEMEE------------IAGVRFIRCDIFKETIFDDIDRALREEGI 89 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCCC------------CTTCEEEECCTTSSSHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEecccccc------------CCCeEEEEccccCHHHHHHHHHHhhcccC
Confidence 468899999999999999999877 55999999998521 1168999999987653322111 1 1
Q ss_pred CceeEEEeccccccc-------cCCHHHHHHHHHHHHhcccCCcEEEEEEcCchH
Q 025059 104 NQADLVCCFQHLQMC-------FETEERARRLLQNVSSLLKPGGYFLGITPDSST 151 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~-------~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~ 151 (258)
++||+|++....... .........++..+.++|+|||.|++.+.....
T Consensus 90 ~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~ 144 (191)
T 3dou_A 90 EKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM 144 (191)
T ss_dssp SSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH
T ss_pred CcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC
Confidence 499999996543211 011123467899999999999999988665543
No 196
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.38 E-value=3.4e-12 Score=113.02 Aligned_cols=125 Identities=14% Similarity=0.077 Sum_probs=92.9
Q ss_pred HHHHhcCCCCEEEEEcCCCCccHHHHHHcCC-CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhc
Q 025059 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (258)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (258)
++....+++.+|||+|||+|.++..++..+. .+++|+|+|+.|++.|+++....+...++.+.++|+.+.+. +
T Consensus 210 l~~~~~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~------~ 283 (373)
T 3tm4_A 210 MIELAELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQ------Y 283 (373)
T ss_dssp HHHHHTCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGG------T
T ss_pred HHHhhcCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCc------c
Confidence 3333366789999999999999999988754 48999999999999999999877654578999999876554 4
Q ss_pred CCceeEEEecccccccc---CCHHH-HHHHHHHHHhcccCCcEEEEEEcCchHHHHHH
Q 025059 103 ANQADLVCCFQHLQMCF---ETEER-ARRLLQNVSSLLKPGGYFLGITPDSSTIWAKY 156 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~~---~~~~~-~~~~l~~i~~~LkpgG~~i~~~~~~~~~~~~~ 156 (258)
+++||+|+++...+.-. ..... ...+++.+.++| ||.+++.+++...+.+.+
T Consensus 284 ~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~~~~~~~~~ 339 (373)
T 3tm4_A 284 VDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTEKKAIEEAI 339 (373)
T ss_dssp CSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESCHHHHHHHH
T ss_pred cCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHH
Confidence 68999999965433211 11222 378889999988 666666677766555444
No 197
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.38 E-value=1.9e-12 Score=109.80 Aligned_cols=106 Identities=15% Similarity=0.034 Sum_probs=86.2
Q ss_pred hcCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
...++.+|||+|||+|.++..++.. +..+++|+|+|+.+++.|+++.+.++.. ++.++++|+.+.+ ..++|
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~~-------~~~~~ 187 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDVE-------LKDVA 187 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGCC-------CTTCE
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHcC-------ccCCc
Confidence 3567899999999999999999887 3559999999999999999998876543 6789999986531 24689
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
|+|++.... ....++..+.+.|+|||+++++....
T Consensus 188 D~Vi~d~p~--------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 188 DRVIMGYVH--------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp EEEEECCCS--------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred eEEEECCcc--------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 999887643 34568889999999999999885443
No 198
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.38 E-value=1.6e-12 Score=112.60 Aligned_cols=113 Identities=18% Similarity=0.094 Sum_probs=84.9
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
..++.+|||+|||+|..+..++.. +.++++|+|+|+.+++.++++....+.. ++.++++|+...+. ..++|
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~------~~~~f 188 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGE------LNVEF 188 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGG------GCCCE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhccc------ccccC
Confidence 347889999999999999998875 3368999999999999999998876543 68999999755332 35689
Q ss_pred eEEEeccc------ccccc-----CCH-------HHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 107 DLVCCFQH------LQMCF-----ETE-------ERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 107 D~V~~~~~------l~~~~-----~~~-------~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|+|++... ++..- .+. .....++.++.++|||||.+++++..
T Consensus 189 D~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 189 DKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp EEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 99998422 11100 011 11268999999999999999997654
No 199
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.37 E-value=2.6e-12 Score=106.26 Aligned_cols=106 Identities=15% Similarity=0.072 Sum_probs=82.6
Q ss_pred CCCEEEEEcCCCCccHHHHHHcC--CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcC--Cce
Q 025059 31 PYVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA--NQA 106 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~f 106 (258)
++.+|||+|||+|..+..++... ..+++++|+++.+++.|++++...+...++.+.++|+.+ ..+.++..+ ++|
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~--~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALA--TLEQLTQGKPLPEF 149 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH--HHHHHHTSSSCCCE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH--HHHHHHhcCCCCCc
Confidence 56799999999999998887762 359999999999999999998766554478999998632 111121122 789
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|+|++.... .....+++++.++|+|||++++.
T Consensus 150 D~V~~d~~~-------~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 150 DLIFIDADK-------RNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp EEEEECSCG-------GGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CEEEECCCH-------HHHHHHHHHHHHHcCCCeEEEEe
Confidence 999876532 34678899999999999999987
No 200
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.37 E-value=4.9e-12 Score=112.85 Aligned_cols=118 Identities=14% Similarity=0.079 Sum_probs=90.6
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCC-CceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRK-NFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.++.+|||+|||+|.++..++..+..+++|+|+|+.+++.|++++..++. ..++.++++|+.+. ...+.....+||+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~--~~~~~~~~~~fD~ 296 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKL--LRTYRDRGEKFDV 296 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHH--HHHHHHTTCCEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHH--HHHHHhcCCCCCE
Confidence 56889999999999999999887767999999999999999999987755 33789999997442 1112112568999
Q ss_pred EEeccccc-----cccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 109 VCCFQHLQ-----MCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 109 V~~~~~l~-----~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
|++.-... ...........++.++.++|+|||++++++...
T Consensus 297 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 297 IVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp EEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99863211 112223567889999999999999999986654
No 201
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.37 E-value=7.8e-12 Score=100.71 Aligned_cols=102 Identities=12% Similarity=0.010 Sum_probs=76.0
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|.++..++..+..+++|+|+|+.+++.|+++.. ++.++++|+.+ + +++||+
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~--~-------~~~~D~ 113 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSE--I-------SGKYDT 113 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGG--C-------CCCEEE
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHH--C-------CCCeeE
Confidence 34678999999999999999888766689999999999999998875 57899999754 2 268999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
|++...+|+. .......+++++.+++ |+++++..+..
T Consensus 114 v~~~~p~~~~--~~~~~~~~l~~~~~~~--g~~~~~~~~~~ 150 (200)
T 1ne2_A 114 WIMNPPFGSV--VKHSDRAFIDKAFETS--MWIYSIGNAKA 150 (200)
T ss_dssp EEECCCC---------CHHHHHHHHHHE--EEEEEEEEGGG
T ss_pred EEECCCchhc--cCchhHHHHHHHHHhc--CcEEEEEcCch
Confidence 9998877762 1223357888888888 55555444433
No 202
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.37 E-value=6.3e-12 Score=104.36 Aligned_cols=107 Identities=10% Similarity=0.002 Sum_probs=83.9
Q ss_pred CCCEEEEEcCCCCccHHHHHHc-C-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh---cCCc
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE---KANQ 105 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~ 105 (258)
++.+|||||||+|..+..++.. + ..+++++|+++.+++.|+++++..+...++.++++|+.+ ..+.+.. ..++
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~--~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAML--ALDNLLQGQESEGS 147 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH--HHHHHHHSTTCTTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH--HHHHHHhccCCCCC
Confidence 5689999999999999998876 2 469999999999999999999876654479999999743 1111111 1478
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
||+|++... ......+++.+.++|+|||++++..
T Consensus 148 fD~I~~d~~-------~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 148 YDFGFVDAD-------KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEEECSC-------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCEEEECCc-------hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 999987643 2346789999999999999999873
No 203
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.36 E-value=9e-13 Score=111.89 Aligned_cols=116 Identities=11% Similarity=0.026 Sum_probs=84.9
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
.++.+|||+|||+|+.+..++.. +..+++|+|+++.+++.++++....+.. ++.++++|+..... .+....++||
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~--~~~~~~~~fD 158 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKD--YLLKNEIFFD 158 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHH--HHHHTTCCEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcch--hhhhccccCC
Confidence 47889999999999999888874 3369999999999999999998876543 78999999743221 1111257899
Q ss_pred EEEecccccc--ccC-----CH-------HHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 108 LVCCFQHLQM--CFE-----TE-------ERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 108 ~V~~~~~l~~--~~~-----~~-------~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
+|++...... .+. +. .....++.++.++|||||.+++++++
T Consensus 159 ~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 159 KILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp EEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 9988632211 000 00 22478899999999999999998654
No 204
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.35 E-value=3.6e-12 Score=104.76 Aligned_cols=107 Identities=13% Similarity=0.106 Sum_probs=83.0
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc-C-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcC--Cc
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA--NQ 105 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~ 105 (258)
.++.+|||+|||+|..+..++.. + ..+++++|+++.+++.|++++...+...++.++++|+.+. .+.+.... ++
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~--~~~~~~~~~~~~ 145 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALET--LDELLAAGEAGT 145 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHH--HHHHHHTTCTTC
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHH--HHHHHhcCCCCC
Confidence 36789999999999999988875 2 4699999999999999999988765544789999987431 11121111 68
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
||+|++.... .....+++++.++|+|||++++.
T Consensus 146 ~D~v~~d~~~-------~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 146 FDVAVVDADK-------ENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp EEEEEECSCS-------TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEECCCH-------HHHHHHHHHHHHHcCCCeEEEEE
Confidence 9999886532 23567899999999999999986
No 205
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.35 E-value=7.6e-12 Score=106.56 Aligned_cols=110 Identities=13% Similarity=0.064 Sum_probs=82.1
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhc--C--------CCceeEEEEcCCCCCchhhh
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ--R--------KNFIAEFFEADPCAENFETQ 98 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~--------~~~~~~~~~~d~~~~~~~~~ 98 (258)
.+++.+|||||||+|..+..+++.+..+++++|+++.+++.|++++ .. + ...+++++++|+.+ .
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~-----~ 146 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFE-----F 146 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHH-----H
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHH-----H
Confidence 3467899999999999999998875569999999999999999987 32 1 12378999998632 1
Q ss_pred hhhcCCceeEEEeccccccccCCHHH--HHHHHHHHHhcccCCcEEEEEEc
Q 025059 99 MQEKANQADLVCCFQHLQMCFETEER--ARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 99 ~~~~~~~fD~V~~~~~l~~~~~~~~~--~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
+.. .++||+|++....+. ..... ...+++++.++|+|||++++...
T Consensus 147 l~~-~~~fD~Ii~d~~~~~--~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 147 IKN-NRGFDVIIADSTDPV--GPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp HHH-CCCEEEEEEECCCCC-------TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcc-cCCeeEEEECCCCCC--CcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 222 578999998654332 11222 27889999999999999998753
No 206
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.35 E-value=1.6e-12 Score=107.93 Aligned_cols=101 Identities=15% Similarity=0.111 Sum_probs=76.4
Q ss_pred CCCEEEEEcCCCCccHHHHHHc-----CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA-----LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~-----~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
++.+|||||||+|..+..++.. +..+|+|+|+|+.+++.|+. . ..++.++++|+.+....+.. ...+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~--~~~v~~~~gD~~~~~~l~~~--~~~~ 152 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----D--MENITLHQGDCSDLTTFEHL--REMA 152 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----G--CTTEEEEECCSSCSGGGGGG--SSSC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----c--CCceEEEECcchhHHHHHhh--ccCC
Confidence 4579999999999999988775 34699999999999988861 1 12799999998764111111 2347
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHh-cccCCcEEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSS-LLKPGGYFLGIT 146 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~-~LkpgG~~i~~~ 146 (258)
||+|++..+ |. ....++.++.+ +|+|||++++..
T Consensus 153 fD~I~~d~~-~~------~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 153 HPLIFIDNA-HA------NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp SSEEEEESS-CS------SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred CCEEEECCc-hH------hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 999987654 31 35678999997 999999999864
No 207
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.34 E-value=1.8e-12 Score=109.93 Aligned_cols=106 Identities=14% Similarity=0.029 Sum_probs=87.1
Q ss_pred HHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCC
Q 025059 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (258)
Q Consensus 25 i~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (258)
+.....+|.+|||+|||+|.++..++..+..+|+++|+++.+++.++++.+.++...++.++++|+.+.. +.+
T Consensus 119 i~~~~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-------~~~ 191 (278)
T 3k6r_A 119 MAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-------GEN 191 (278)
T ss_dssp HHHHCCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-------CCS
T ss_pred HHHhcCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-------ccc
Confidence 3456678999999999999999999888877999999999999999999998877668999999986643 367
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.||.|++... +. ...++..+.++|++||++.+.
T Consensus 192 ~~D~Vi~~~p-~~-------~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 192 IADRILMGYV-VR-------THEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp CEEEEEECCC-SS-------GGGGHHHHHHHEEEEEEEEEE
T ss_pred CCCEEEECCC-Cc-------HHHHHHHHHHHcCCCCEEEEE
Confidence 8999987642 21 235677778899999998654
No 208
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.34 E-value=8.8e-13 Score=107.39 Aligned_cols=89 Identities=19% Similarity=0.206 Sum_probs=72.8
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||+|||+|..+..+ . .+++|+|+|+. ++.+.++|+.+.++ ++++||+|
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l---~-~~v~~~D~s~~----------------~~~~~~~d~~~~~~------~~~~fD~v 119 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI---R-NPVHCFDLASL----------------DPRVTVCDMAQVPL------EDESVDVA 119 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC---C-SCEEEEESSCS----------------STTEEESCTTSCSC------CTTCEEEE
T ss_pred CCCCeEEEECCcCCHHHHHh---h-ccEEEEeCCCC----------------CceEEEeccccCCC------CCCCEeEE
Confidence 46789999999999887766 2 48999999987 24578899877655 56899999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
++..++|+ .+...+++++.++|+|||.++++.+..
T Consensus 120 ~~~~~l~~-----~~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 120 VFCLSLMG-----TNIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp EEESCCCS-----SCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred EEehhccc-----cCHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 99998873 346789999999999999999985543
No 209
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.34 E-value=5.4e-12 Score=111.34 Aligned_cols=97 Identities=18% Similarity=0.125 Sum_probs=81.2
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.+..+|||||||+|..+..+++. +..+++++|+ +.+++.|+++ .++.++.+|+.+ ++ +.+ |+
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~-~~------p~~--D~ 262 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFK-EV------PSG--DT 262 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CC------CCC--SE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCC-CC------CCC--CE
Confidence 46789999999999999999876 3458999999 8888776542 279999999876 44 333 99
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|++..++|+ .+.++...++++++++|+|||.+++.
T Consensus 263 v~~~~vlh~--~~d~~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 263 ILMKWILHD--WSDQHCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp EEEESCGGG--SCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred EEehHHhcc--CCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 999999997 45778889999999999999999987
No 210
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.33 E-value=9e-12 Score=118.57 Aligned_cols=113 Identities=15% Similarity=0.123 Sum_probs=90.6
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCC-ceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKN-FIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++..++.. .++.++++|+.+ .++...++||+|
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~-----~l~~~~~~fD~I 613 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA-----WLREANEQFDLI 613 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHH-----HHHHCCCCEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHH-----HHHhcCCCccEE
Confidence 58899999999999999988877778999999999999999999887654 369999999743 122245789999
Q ss_pred Eeccccc-------cccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 110 CCFQHLQ-------MCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 110 ~~~~~l~-------~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
++..... ..+........++..+.++|+|||++++.+..
T Consensus 614 i~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 614 FIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp EECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9854211 12334567889999999999999999988665
No 211
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.33 E-value=1.9e-11 Score=98.81 Aligned_cols=104 Identities=14% Similarity=0.067 Sum_probs=80.4
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++....+. ++.++++|+.+ + +++||+|
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~--~-------~~~~D~v 116 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSE--F-------NSRVDIV 116 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGG--C-------CCCCSEE
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHH--c-------CCCCCEE
Confidence 46789999999999999999887666899999999999999999877654 78999999754 2 2489999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
++....+.. .......+++.+.+++ ||.++...++
T Consensus 117 ~~~~p~~~~--~~~~~~~~l~~~~~~l--~~~~~~~~~~ 151 (207)
T 1wy7_A 117 IMNPPFGSQ--RKHADRPFLLKAFEIS--DVVYSIHLAK 151 (207)
T ss_dssp EECCCCSSS--STTTTHHHHHHHHHHC--SEEEEEEECC
T ss_pred EEcCCCccc--cCCchHHHHHHHHHhc--CcEEEEEeCC
Confidence 998766542 1223456788888888 6655554333
No 212
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.33 E-value=4.7e-12 Score=111.91 Aligned_cols=98 Identities=18% Similarity=0.120 Sum_probs=80.9
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.+..+|||||||+|..+..++.. +..+++++|+ +.+++.|+++ .++.++.+|+.+ ++ +.+ |+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~------p~~--D~ 264 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFD-GV------PKG--DA 264 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CC------CCC--SE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCC-CC------CCC--CE
Confidence 45689999999999999999876 3458999999 8888776532 278999999875 44 333 99
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
|++..++|+ .+.++...+++++.++|+|||.+++..
T Consensus 265 v~~~~vlh~--~~~~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 265 IFIKWICHD--WSDEHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp EEEESCGGG--BCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEechhhc--CCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 999999997 457778899999999999999998873
No 213
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.33 E-value=4.8e-12 Score=101.34 Aligned_cols=110 Identities=20% Similarity=0.105 Sum_probs=78.1
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-CC---------CeEEEEecChhHHHHHHHHHHhcCCCceeEEE-EcCCCCCchhh
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-LI---------ANYIGIDVATSGIGEARDTWENQRKNFIAEFF-EADPCAENFET 97 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~~---------~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~-~~d~~~~~~~~ 97 (258)
+.++.+|||+|||+|..+..++.. +. .+++|+|+|+.+. . .++.+. ++|+.......
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~---------~---~~~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP---------L---EGATFLCPADVTDPRTSQ 87 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC---------C---TTCEEECSCCTTSHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc---------C---CCCeEEEeccCCCHHHHH
Confidence 468899999999999999999887 43 6899999998430 0 157888 88886543211
Q ss_pred hhh--hcCCceeEEEeccccccccCCHHHH-------HHHHHHHHhcccCCcEEEEEEcCch
Q 025059 98 QMQ--EKANQADLVCCFQHLQMCFETEERA-------RRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 98 ~~~--~~~~~fD~V~~~~~l~~~~~~~~~~-------~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
.+. .++++||+|++..+++.......+. ..++.++.++|+|||.+++......
T Consensus 88 ~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 149 (196)
T 2nyu_A 88 RILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS 149 (196)
T ss_dssp HHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG
T ss_pred HHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Confidence 110 0245899999977555322211222 5889999999999999999876653
No 214
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.33 E-value=6.6e-12 Score=108.65 Aligned_cols=113 Identities=14% Similarity=0.059 Sum_probs=84.0
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhc--C-C-CceeEEEEcCCCCCchhhhhhhcC
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ--R-K-NFIAEFFEADPCAENFETQMQEKA 103 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~--~-~-~~~~~~~~~d~~~~~~~~~~~~~~ 103 (258)
.+++.+|||||||+|..+..+++. +..+++++|+++.+++.|+++++.. + . ..+++++++|+.. .++...
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~-----~l~~~~ 149 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARA-----YLERTE 149 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHH-----HHHHCC
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHH-----HHHhcC
Confidence 346689999999999999999876 3569999999999999999987541 1 1 2278999999743 122246
Q ss_pred CceeEEEeccccccccCC-HHH--HHHHHHHHHhcccCCcEEEEEE
Q 025059 104 NQADLVCCFQHLQMCFET-EER--ARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~-~~~--~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
++||+|++....+..... ... ...+++++.++|+|||++++..
T Consensus 150 ~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 150 ERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp CCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 789999987654430001 111 3689999999999999999884
No 215
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.33 E-value=7e-12 Score=107.99 Aligned_cols=114 Identities=11% Similarity=-0.015 Sum_probs=81.5
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHh--cCC-CceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWEN--QRK-NFIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~--~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
+++.+|||||||+|..+..+++.. ..+++++|+++.+++.|++++.. .+. ..+++++++|+.. .++...++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~-----~l~~~~~~ 168 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFE-----FMKQNQDA 168 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH-----HHHTCSSC
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH-----HHhhCCCC
Confidence 456899999999999999998773 46999999999999999998764 111 2278999999632 12223578
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
||+|++....+...........+++++.++|+|||++++...+
T Consensus 169 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 169 FDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 9999986543321000012367899999999999999988633
No 216
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.32 E-value=7.6e-12 Score=108.57 Aligned_cols=113 Identities=15% Similarity=0.143 Sum_probs=84.1
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhc--CC-CceeEEEEcCCCCCchhhhhhhcCC
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ--RK-NFIAEFFEADPCAENFETQMQEKAN 104 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (258)
.+++.+|||||||+|..+..+++. +..+++++|+|+.+++.|+++++.. .. ..+++++++|+.+ .++..++
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~-----~l~~~~~ 188 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK-----FLENVTN 188 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH-----HHHHCCS
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHH-----HHhhcCC
Confidence 345689999999999999999877 4569999999999999999987641 11 2278999999633 1111357
Q ss_pred ceeEEEeccccccccCCHHHH--HHHHHHHHhcccCCcEEEEEEcC
Q 025059 105 QADLVCCFQHLQMCFETEERA--RRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~--~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
+||+|++...-+. ...... ..+++++.++|+|||++++...+
T Consensus 189 ~fDvIi~d~~~p~--~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 189 TYDVIIVDSSDPI--GPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp CEEEEEEECCCSS--SGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CceEEEECCcCCC--CcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 8999998653221 111122 68999999999999999998654
No 217
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.32 E-value=5e-12 Score=111.77 Aligned_cols=104 Identities=19% Similarity=0.219 Sum_probs=83.6
Q ss_pred HHHHHh--cCCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhh
Q 025059 23 ALIKIY--SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQM 99 (258)
Q Consensus 23 ~li~~~--~~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 99 (258)
.++..+ .+++.+|||||||+|..+..++... ..+++++|+ +.+++.|++. .++.++++|+.+ ++
T Consensus 199 ~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~---- 265 (372)
T 1fp1_D 199 RMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-------SGIEHVGGDMFA-SV---- 265 (372)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CC----
T ss_pred HHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-------CCCEEEeCCccc-CC----
Confidence 344444 3467899999999999999998874 348999999 9998877642 168999999866 43
Q ss_pred hhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 100 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+. ||+|++..++|+ .+.+....+++++.++|+|||.+++.
T Consensus 266 --~~--~D~v~~~~~lh~--~~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 266 --PQ--GDAMILKAVCHN--WSDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp --CC--EEEEEEESSGGG--SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CC--CCEEEEeccccc--CCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 32 999999999997 34566779999999999999999987
No 218
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.32 E-value=1.1e-11 Score=106.48 Aligned_cols=113 Identities=18% Similarity=0.058 Sum_probs=81.4
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHh--cCC-CceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWEN--QRK-NFIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~--~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
+++.+|||||||+|..+..+++. +..+++++|+++.+++.|++++.. ... ..++.++++|+... ++...++
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~-----l~~~~~~ 163 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEY-----VRKFKNE 163 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH-----GGGCSSC
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH-----HhhCCCC
Confidence 45689999999999999999877 457999999999999999998753 111 22789999996331 1113578
Q ss_pred eeEEEeccccccccCCHHH--HHHHHHHHHhcccCCcEEEEEEcC
Q 025059 106 ADLVCCFQHLQMCFETEER--ARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~--~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
||+|++...-+. ...... ...+++++.++|+|||++++...+
T Consensus 164 fD~Ii~d~~~~~-~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 164 FDVIIIDSTDPT-AGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEEEEEEC-----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred ceEEEEcCCCcc-cCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 999997542220 011111 268899999999999999998654
No 219
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.31 E-value=4.5e-13 Score=113.86 Aligned_cols=108 Identities=20% Similarity=0.070 Sum_probs=75.2
Q ss_pred hcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHH-HhcCCCceeEEE--EcCCCCCchhhhhhhcCC
Q 025059 28 YSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTW-ENQRKNFIAEFF--EADPCAENFETQMQEKAN 104 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~-~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~ 104 (258)
.+.++.+|||||||+|+++..++.. .+|+|+|+|+ |+..++++. .....+.++.++ ++|+.. + +++
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~--l------~~~ 147 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTK--M------EPF 147 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGG--C------CCC
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhh--C------CCC
Confidence 3457899999999999999988777 5899999999 543332211 111112257888 888754 2 357
Q ss_pred ceeEEEeccccccccCCH--HHH--HHHHHHHHhcccCCc--EEEEEEcC
Q 025059 105 QADLVCCFQHLQMCFETE--ERA--RRLLQNVSSLLKPGG--YFLGITPD 148 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~--~~~--~~~l~~i~~~LkpgG--~~i~~~~~ 148 (258)
+||+|+|..+ ++. ... +.. ..++..+.++|+||| .|++.+..
T Consensus 148 ~fD~Vvsd~~-~~~-~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 148 QADTVLCDIG-ESN-PTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCSEEEECCC-CCC-SCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CcCEEEECCC-cCC-CchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 8999999876 431 111 111 137899999999999 99887544
No 220
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.31 E-value=3.2e-12 Score=106.91 Aligned_cols=114 Identities=10% Similarity=0.040 Sum_probs=76.4
Q ss_pred CCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhc-CCceeE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK-ANQADL 108 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~fD~ 108 (258)
++.+|||+|||+|..+..++.. +..+++|+|+|+.|++.|+++....+...++.++++|+.+.-+. .++.. +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMD-ALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTT-TSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhh-hhhcccCCcccE
Confidence 5679999999999988888765 33599999999999999999998765544699999997542110 11101 268999
Q ss_pred EEeccccccccCC-----------HHHHHHHHHHHHhcccCCcEEEEE
Q 025059 109 VCCFQHLQMCFET-----------EERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 109 V~~~~~l~~~~~~-----------~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|++....+..-.. .+....++..+.++|+|||.+.+.
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 9998544421100 011235678899999999987553
No 221
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.31 E-value=6.2e-13 Score=112.35 Aligned_cols=109 Identities=14% Similarity=0.053 Sum_probs=75.8
Q ss_pred HhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHH-HhcCCCceeEEE--EcCCCCCchhhhhhhcC
Q 025059 27 IYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTW-ENQRKNFIAEFF--EADPCAENFETQMQEKA 103 (258)
Q Consensus 27 ~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~-~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~ 103 (258)
..+.++.+|||||||+|+++..++.. .+|+|+|+++ |+..++++. .....+.++.++ ++|+.+ + ++
T Consensus 70 ~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~--l------~~ 138 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHT--L------PV 138 (265)
T ss_dssp TSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTT--S------CC
T ss_pred CCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhH--C------CC
Confidence 34568899999999999999888776 6899999998 533332111 111112257888 889865 3 35
Q ss_pred CceeEEEeccccccccCCH--HHH--HHHHHHHHhcccCCc--EEEEEEcC
Q 025059 104 NQADLVCCFQHLQMCFETE--ERA--RRLLQNVSSLLKPGG--YFLGITPD 148 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~--~~~--~~~l~~i~~~LkpgG--~~i~~~~~ 148 (258)
++||+|+|..+ +.. ... +.. ..++..+.++|+||| .|++.+..
T Consensus 139 ~~fD~V~sd~~-~~~-~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 139 ERTDVIMCDVG-ESS-PKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCCSEEEECCC-CCC-SCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CCCcEEEEeCc-ccC-CccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 78999999876 331 221 111 138899999999999 99987643
No 222
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.31 E-value=9.8e-12 Score=107.50 Aligned_cols=111 Identities=12% Similarity=0.035 Sum_probs=79.9
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhc--CC-CceeEEEEcCCCCCchhhhhhhcCC
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ--RK-NFIAEFFEADPCAENFETQMQEKAN 104 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (258)
.+++.+|||||||+|..+..+++. +..+++++|+++.+++.|+++++.. +. ..+++++.+|+.. .++...+
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~-----~l~~~~~ 180 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFE-----FLKNHKN 180 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHH-----HHHHCTT
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHH-----HHHhcCC
Confidence 345689999999999999999876 3469999999999999999987542 11 2378999998632 1222467
Q ss_pred ceeEEEeccccccccCCHHHH--HHHHHHHHhcccCCcEEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERA--RRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~--~~~l~~i~~~LkpgG~~i~~~ 146 (258)
+||+|++...-+. .....+ ..+++++.++|+|||++++..
T Consensus 181 ~fD~Ii~d~~~~~--~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 181 EFDVIITDSSDPV--GPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CEEEEEECCC---------------HHHHHHHHEEEEEEEEEEC
T ss_pred CceEEEEcCCCCC--CcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 8999998653321 112222 789999999999999999985
No 223
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.31 E-value=2.4e-11 Score=107.50 Aligned_cols=106 Identities=9% Similarity=-0.138 Sum_probs=84.4
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCC-CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCC-CchhhhhhhcCCceeE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQEKANQADL 108 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~fD~ 108 (258)
++.+|||+| |+|..+..++..+. .+++|+|+|+.|++.|+++.+..+.. ++.++++|+.+ .+.. ..++||+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~-----~~~~fD~ 244 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDY-----ALHKFDT 244 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTT-----TSSCBSE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhh-----ccCCccE
Confidence 578999999 99999999887765 69999999999999999999877654 79999999866 2210 2468999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCc-EEEEEEcC
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGG-YFLGITPD 148 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG-~~i~~~~~ 148 (258)
|++....+. .....++.++.++|+||| .+++.+..
T Consensus 245 Vi~~~p~~~-----~~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 245 FITDPPETL-----EAIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp EEECCCSSH-----HHHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred EEECCCCch-----HHHHHHHHHHHHHcccCCeEEEEEEec
Confidence 999765442 236889999999999999 44555443
No 224
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.31 E-value=9.5e-12 Score=106.09 Aligned_cols=112 Identities=14% Similarity=0.140 Sum_probs=84.0
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcC--C-CceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQR--K-NFIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~--~-~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
+++.+|||||||+|..+..+++.. ..+++++|+++.+++.|+++++... . ..+++++++|+.. .++...++
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~-----~l~~~~~~ 151 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK-----FLENVTNT 151 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH-----HHHHCCSC
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHH-----HHHhCCCC
Confidence 466899999999999999998763 4699999999999999999875421 0 2278999999733 11113678
Q ss_pred eeEEEeccccccccCCHHHH--HHHHHHHHhcccCCcEEEEEEcC
Q 025059 106 ADLVCCFQHLQMCFETEERA--RRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~--~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
||+|++....+. .....+ ..+++++.++|+|||++++...+
T Consensus 152 fD~Ii~d~~~~~--~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 152 YDVIIVDSSDPI--GPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp EEEEEEECCCTT--TGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred ceEEEEcCCCCC--CcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 999998543322 111222 68999999999999999998554
No 225
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.30 E-value=5.7e-12 Score=107.02 Aligned_cols=114 Identities=12% Similarity=0.069 Sum_probs=83.7
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhc--CC-CceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ--RK-NFIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
+.+.+|||||||+|..+..+++. +..+++++|+++.+++.|+++++.. .. ..+++++.+|+.. .++...++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~-----~l~~~~~~ 148 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFM-----HIAKSENQ 148 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHH-----HHHTCCSC
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH-----HHhhCCCC
Confidence 45689999999999999999877 5579999999999999999987531 11 2378999999742 12223578
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
||+|++....+......-....+++.+.++|+|||++++...+
T Consensus 149 fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 149 YDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp EEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9999986533221000001257899999999999999998544
No 226
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.30 E-value=1.6e-11 Score=104.80 Aligned_cols=103 Identities=14% Similarity=0.090 Sum_probs=77.4
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|.++..++..+. +++|+|+|+.+++.++++....+...+++++++|+.+.++ ..||+
T Consensus 26 ~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~--------~~fD~ 96 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL--------PFFDT 96 (285)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC--------CCCSE
T ss_pred CCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc--------hhhcE
Confidence 45788999999999999999988765 9999999999999999988654332378999999976554 37999
Q ss_pred EEeccccccccCCHHHHHHHHH--------------HH--HhcccCCcEEE
Q 025059 109 VCCFQHLQMCFETEERARRLLQ--------------NV--SSLLKPGGYFL 143 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~--------------~i--~~~LkpgG~~i 143 (258)
|+++...+. ..+-...++. ++ +++|+|||.++
T Consensus 97 vv~nlpy~~---~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 97 CVANLPYQI---SSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp EEEECCGGG---HHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred EEEecCccc---chHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 999765554 1222223332 22 35889999874
No 227
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.30 E-value=3.9e-12 Score=109.61 Aligned_cols=108 Identities=16% Similarity=0.051 Sum_probs=74.6
Q ss_pred hcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEec----ChhHHHHHHHHHHhcCCCceeEEEEc-CCCCCchhhhhhhc
Q 025059 28 YSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDV----ATSGIGEARDTWENQRKNFIAEFFEA-DPCAENFETQMQEK 102 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~----s~~~l~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~ 102 (258)
.++++.+|||||||+|+++..++.. ++|+|+|+ ++.+++.+. ....+ ...+.++++ |+... +
T Consensus 79 ~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l--------~ 145 (305)
T 2p41_A 79 LVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFI--------P 145 (305)
T ss_dssp SSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTS--------C
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccC--------C
Confidence 4567899999999999999988777 58999999 565442111 01000 126888888 87553 3
Q ss_pred CCceeEEEeccccccccCC-HHH--HHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 103 ANQADLVCCFQHLQMCFET-EER--ARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~~-~~~--~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
.++||+|+|..+.+ .... .+. ...++..+.++|+|||.|++.++..
T Consensus 146 ~~~fD~V~sd~~~~-~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 146 PERCDTLLCDIGES-SPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred cCCCCEEEECCccc-cCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 46899999977653 1111 111 1258899999999999999987665
No 228
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.30 E-value=5.9e-12 Score=111.82 Aligned_cols=115 Identities=13% Similarity=0.086 Sum_probs=87.8
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
++.+|||+|||+|.++..++.. ..+++|+|+|+.+++.|+++...++.. ++.++++|+.+. ...+.....+||+|+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~-~~~~~~~d~~~~--~~~~~~~~~~fD~Ii 284 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLG-NVRVLEANAFDL--LRRLEKEGERFDLVV 284 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCT-TEEEEESCHHHH--HHHHHHTTCCEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEECCHHHH--HHHHHhcCCCeeEEE
Confidence 6789999999999999999887 558999999999999999999877643 389999997432 111211257899999
Q ss_pred eccccc-----cccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 111 CFQHLQ-----MCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 111 ~~~~l~-----~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+.-... ...........++..+.++|+|||.+++.+...
T Consensus 285 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 285 LDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp ECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 853211 011123567889999999999999999987664
No 229
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.30 E-value=4.9e-12 Score=110.27 Aligned_cols=112 Identities=13% Similarity=0.071 Sum_probs=81.9
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhc--CC-CceeEEEEcCCCCCchhhhhhh-cCC
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQ--RK-NFIAEFFEADPCAENFETQMQE-KAN 104 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~-~~~ 104 (258)
+++.+|||||||+|..+..+++.. ..+++++|+|+.+++.|+++++.. +. ..+++++++|+... ++. +++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~-----l~~~~~~ 193 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAF-----LKNAAEG 193 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHH-----HHTSCTT
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHH-----HHhccCC
Confidence 456899999999999999998763 469999999999999999987642 11 12789999997331 111 357
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
+||+|++................+++++.++|+|||++++..
T Consensus 194 ~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 194 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 899999865321100000113689999999999999999973
No 230
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.29 E-value=3e-12 Score=106.06 Aligned_cols=100 Identities=11% Similarity=0.027 Sum_probs=67.3
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEE-EcCCCCCchhhhhhhcCCceeEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFF-EADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
++.+|||||||+|.++..++..+..+|+|+|+|+.|++.|+++.+. +... ..++..... ..+ ....||.+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~------~~~~~~~~~~~~~~-~~~--~~~~~d~~ 107 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDER------VVVMEQFNFRNAVL-ADF--EQGRPSFT 107 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTT------EEEECSCCGGGCCG-GGC--CSCCCSEE
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcc------ccccccceEEEeCH-hHc--CcCCCCEE
Confidence 5679999999999999999888766999999999999988765432 1111 111111000 001 11134555
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
++..++.. +..++.++.++|+|||.+++.+
T Consensus 108 ~~D~v~~~-------l~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 108 SIDVSFIS-------LDLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp EECCSSSC-------GGGTHHHHHHHSCTTCEEEEEE
T ss_pred EEEEEhhh-------HHHHHHHHHHhccCCCEEEEEE
Confidence 54443332 2679999999999999999874
No 231
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.28 E-value=1.3e-11 Score=106.47 Aligned_cols=112 Identities=11% Similarity=0.088 Sum_probs=81.7
Q ss_pred CEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEEe
Q 025059 33 VTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (258)
Q Consensus 33 ~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~ 111 (258)
.+|||||||+|..+..+++. +..+++++|+++.+++.|++++.... ..+++++++|+.. +.... +.++||+|++
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~--~l~~~--~~~~fDvIi~ 165 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARM--VAESF--TPASRDVIIR 165 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHH--HHHTC--CTTCEEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHH--HHhhc--cCCCCCEEEE
Confidence 49999999999999999884 44599999999999999999875421 2378999999743 11111 3578999998
Q ss_pred ccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 112 FQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 112 ~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
....+......-....+++.+.++|+|||++++...+.
T Consensus 166 D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 166 DVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp CCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 64333211100012679999999999999999886543
No 232
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.27 E-value=7.9e-12 Score=109.66 Aligned_cols=99 Identities=15% Similarity=0.103 Sum_probs=81.4
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
.+++.+|||||||+|..+..++.. +..+++++|+ +.+++.|++. . ++.++.+|+.+ ++ + .||
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~---~v~~~~~d~~~-~~------p--~~D 248 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----N---NLTYVGGDMFT-SI------P--NAD 248 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----T---TEEEEECCTTT-CC------C--CCS
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----C---CcEEEeccccC-CC------C--Ccc
Confidence 446789999999999999999876 3458999999 9999887641 1 58999999865 33 3 399
Q ss_pred EEEeccccccccCCHHHHHHHHHHHHhcccC---CcEEEEEE
Q 025059 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKP---GGYFLGIT 146 (258)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lkp---gG~~i~~~ 146 (258)
+|++..++|+ .+.+....+++++.++|+| ||.+++..
T Consensus 249 ~v~~~~~lh~--~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 249 AVLLKYILHN--WTDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp EEEEESCGGG--SCHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred EEEeehhhcc--CCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 9999999997 3456667999999999999 99998874
No 233
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.27 E-value=7.7e-12 Score=104.05 Aligned_cols=104 Identities=16% Similarity=0.160 Sum_probs=84.8
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.+..+|||||||+|-++..+... +..+|+++|+++.|++.++.++...+. ...+.+.|....+ +.++||+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~--~~~~~v~D~~~~~-------p~~~~Dv 201 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV--PHRTNVADLLEDR-------LDEPADV 201 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC--CEEEEECCTTTSC-------CCSCCSE
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeeecccC-------CCCCcch
Confidence 45689999999999999999877 567999999999999999999987755 5788999986655 4789999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|++.-.+|++ + .+.....+ .+...|+|+|+++-.
T Consensus 202 aL~lkti~~L-e-~q~kg~g~-~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 202 TLLLKTLPCL-E-TQQRGSGW-EVIDIVNSPNIVVTF 235 (281)
T ss_dssp EEETTCHHHH-H-HHSTTHHH-HHHHHSSCSEEEEEE
T ss_pred HHHHHHHHHh-h-hhhhHHHH-HHHHHhCCCCEEEec
Confidence 9999999872 2 22233455 899999999988654
No 234
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.27 E-value=2.3e-11 Score=100.26 Aligned_cols=103 Identities=17% Similarity=0.044 Sum_probs=81.6
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.++.+|||||||.|.++..+. +...|+|+||++.+++.++++....+. +..+.++|....++ .+++|+|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~-------~~~~Dvv 172 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPP-------AEAGDLA 172 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCC-------CCBCSEE
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCC-------CCCcchH
Confidence 467899999999999998887 666999999999999999999876643 78999999877664 5799999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
++.-.+|++ + ...+...-++...|+++|+++ ++|
T Consensus 173 Lllk~lh~L-E--~q~~~~~~~ll~aL~~~~vvV-sfP 206 (253)
T 3frh_A 173 LIFKLLPLL-E--REQAGSAMALLQSLNTPRMAV-SFP 206 (253)
T ss_dssp EEESCHHHH-H--HHSTTHHHHHHHHCBCSEEEE-EEE
T ss_pred HHHHHHHHh-h--hhchhhHHHHHHHhcCCCEEE-EcC
Confidence 999888862 2 222233338888999998775 444
No 235
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.25 E-value=9.6e-13 Score=103.95 Aligned_cols=94 Identities=11% Similarity=0.050 Sum_probs=73.9
Q ss_pred hcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 28 YSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
-+.++.+|||+|||. +++|+|+.|++.|+++... ++.+.++|+.+.++.. .++++||
T Consensus 9 g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~~---~~~~~fD 65 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQSA---HKESSFD 65 (176)
T ss_dssp TCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGGC---CCSSCEE
T ss_pred CCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc-----CcEEEEechhcCcccc---CCCCCEe
Confidence 367899999999986 2399999999999988643 3788999986544310 0367999
Q ss_pred EEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
+|++..++|+.. .+...++++++++|||||.+++..|
T Consensus 66 ~V~~~~~l~~~~---~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 66 IILSGLVPGSTT---LHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp EEEECCSTTCCC---CCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECChhhhcc---cCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 999999999841 2357899999999999999998533
No 236
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.25 E-value=9e-11 Score=106.35 Aligned_cols=115 Identities=21% Similarity=0.175 Sum_probs=84.5
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
..++.+|||+|||+|+.+..++.. +.++++++|+++.+++.++++....+.. ++.++++|+...+. .+ ++++|
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~--~~--~~~~f 331 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARKAPE--II--GEEVA 331 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTCCSS--SS--CSSCE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhhcch--hh--ccCCC
Confidence 347889999999999999998875 2269999999999999999998876543 68999999876431 01 34789
Q ss_pred eEEEec-----c-ccccc--------cCCHH----HHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 107 DLVCCF-----Q-HLQMC--------FETEE----RARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 107 D~V~~~-----~-~l~~~--------~~~~~----~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|+|++. . .++.. -.... ....++.++.++|+|||.++.+++.
T Consensus 332 D~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 332 DKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp EEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred CEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 999862 1 11110 00011 1267899999999999999988654
No 237
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.24 E-value=7.1e-11 Score=106.39 Aligned_cols=113 Identities=14% Similarity=0.095 Sum_probs=84.6
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCC-CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.++.+|||+|||+|+.+..++.... ++++++|+++.+++.+++++...+. ++.++++|+...+- .+ +.++||+
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~--~~--~~~~fD~ 318 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQ--WC--GEQQFDR 318 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHH--HH--TTCCEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchh--hc--ccCCCCE
Confidence 4788999999999999999887643 6999999999999999999887654 57899999876431 11 3578999
Q ss_pred EEecc------cccccc-----CCH-------HHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 109 VCCFQ------HLQMCF-----ETE-------ERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 109 V~~~~------~l~~~~-----~~~-------~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|++.. .++..- .+. .....++.++.++|+|||.++.++++
T Consensus 319 Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 319 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp EEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred EEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 98632 111100 001 11258899999999999999998643
No 238
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.23 E-value=1.4e-11 Score=107.75 Aligned_cols=109 Identities=22% Similarity=0.246 Sum_probs=85.5
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCC------CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCC
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALI------ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~------~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (258)
++.+|||+|||+|.++..++.... .+++|+|+++.+++.|+.++...+. ++.+.++|..... ..+
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~-------~~~ 200 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANL-------LVD 200 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCC-------CCC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCcc-------ccC
Confidence 568999999999999988876521 5899999999999999998876544 6789999975532 357
Q ss_pred ceeEEEeccccccccCCHHH---------------HHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 105 QADLVCCFQHLQMCFETEER---------------ARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~---------------~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+||+|+++..+++. ...+. ...++..+.+.|+|||.+++.+|++
T Consensus 201 ~fD~Ii~NPPfg~~-~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 201 PVDVVISDLPVGYY-PDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp CEEEEEEECCCSEE-SCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred CccEEEECCCCCCc-CchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 89999998766542 22221 1368999999999999999998764
No 239
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.23 E-value=3.3e-11 Score=105.22 Aligned_cols=105 Identities=12% Similarity=0.070 Sum_probs=84.0
Q ss_pred HHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 26 ~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
...+.++.+|||+|||+|.++.. +. +..+++|+|+|+.+++.|+++...++...++.++++|+.+. . ++
T Consensus 190 ~~~~~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~--------~-~~ 258 (336)
T 2yx1_A 190 MKKVSLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV--------D-VK 258 (336)
T ss_dssp HHHCCTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC--------C-CC
T ss_pred HHhcCCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHh--------c-CC
Confidence 34556789999999999999988 76 56699999999999999999998876544789999997442 1 68
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
||+|++... ++ ...++..+.++|+|||.+++.....
T Consensus 259 fD~Vi~dpP-~~-------~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 259 GNRVIMNLP-KF-------AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp EEEEEECCT-TT-------GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred CcEEEECCc-Hh-------HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 999988532 11 2378889999999999998874443
No 240
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.22 E-value=1.6e-11 Score=111.17 Aligned_cols=112 Identities=19% Similarity=0.126 Sum_probs=83.2
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
.++.+|||+|||+|+.+..++.. +.+.|+++|+|+.+++.++++++..+.. +.++++|+.... .. ..++||
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~--~~---~~~~FD 172 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALA--EA---FGTYFH 172 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHH--HH---HCSCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhh--hh---ccccCC
Confidence 47899999999999999998876 3358999999999999999999877653 788888864322 11 357899
Q ss_pred EEEeccc------ccc------ccC--C----HHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 108 LVCCFQH------LQM------CFE--T----EERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 108 ~V~~~~~------l~~------~~~--~----~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
+|++... ++. ... . ......++.++.++|||||.++.+++.
T Consensus 173 ~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 173 RVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp EEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred EEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 9986221 110 000 0 112378999999999999999987654
No 241
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.20 E-value=1.1e-10 Score=106.48 Aligned_cols=112 Identities=12% Similarity=0.034 Sum_probs=84.1
Q ss_pred CCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
++.+|||+|||+|+.+..++.. +.+.|+++|+|+.+++.++++++..+.. ++.++++|+...+.. ..++||+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~~-----~~~~fD~ 190 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGAA-----VPEMFDA 190 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHHH-----STTCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhhh-----ccccCCE
Confidence 7899999999999999988876 2469999999999999999998876543 688999998653210 2568999
Q ss_pred EEecc------cccccc-----CCH-------HHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 109 VCCFQ------HLQMCF-----ETE-------ERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 109 V~~~~------~l~~~~-----~~~-------~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|++.. .++..- .+. .....++.++.++|||||.++.+++.
T Consensus 191 Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 191 ILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp EEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 98731 111100 011 12357899999999999999998654
No 242
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.19 E-value=1.4e-10 Score=99.55 Aligned_cols=79 Identities=19% Similarity=0.185 Sum_probs=60.4
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|.++..++..+ .+++|+|+++.+++.|+++....+. .++.++++|+...++ .+||+
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~La~~~-~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~--------~~~D~ 109 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKLLPLA-KKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF--------PKFDV 109 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHHTTTS-SEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC--------CCCSE
T ss_pred CCCcCEEEEEcCcCcHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc--------ccCCE
Confidence 4578899999999999999998764 4999999999999999998865433 278999999876443 48999
Q ss_pred EEecccccc
Q 025059 109 VCCFQHLQM 117 (258)
Q Consensus 109 V~~~~~l~~ 117 (258)
|++....+.
T Consensus 110 Vv~n~py~~ 118 (299)
T 2h1r_A 110 CTANIPYKI 118 (299)
T ss_dssp EEEECCGGG
T ss_pred EEEcCCccc
Confidence 998765443
No 243
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.18 E-value=8.5e-11 Score=106.25 Aligned_cols=113 Identities=14% Similarity=0.073 Sum_probs=83.6
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
.++.+|||+|||+|+.+..++.. +.+.|+++|+|+.+++.++++++..+.. ++.+.++|+.... .. .+++||
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~--~~---~~~~FD 177 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELV--PH---FSGFFD 177 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHH--HH---HTTCEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhh--hh---ccccCC
Confidence 47899999999999999888775 3469999999999999999999877653 5888888864321 11 257899
Q ss_pred EEEeccccc--cccC-CH---------------HHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 108 LVCCFQHLQ--MCFE-TE---------------ERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 108 ~V~~~~~l~--~~~~-~~---------------~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
+|++..... .++. +. .....++.++.++|||||.++.+++.
T Consensus 178 ~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs 236 (456)
T 3m4x_A 178 RIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCT 236 (456)
T ss_dssp EEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred EEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEee
Confidence 998743210 0011 11 12348899999999999999987654
No 244
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.16 E-value=7.9e-11 Score=103.50 Aligned_cols=97 Identities=16% Similarity=0.132 Sum_probs=79.7
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
.+..+|||||||+|..+..++... ..+++++|+ +.+++.|++. .++.++.+|+.+ ++ + .||+
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~------~--~~D~ 254 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGN-------ENLNFVGGDMFK-SI------P--SADA 254 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCC-------SSEEEEECCTTT-CC------C--CCSE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccC-------CCcEEEeCccCC-CC------C--CceE
Confidence 366899999999999999998873 348999999 7888776541 158999999866 43 3 4999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccC---CcEEEEE
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKP---GGYFLGI 145 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~Lkp---gG~~i~~ 145 (258)
|++..++|+ .+.+....+++++.++|+| ||.+++.
T Consensus 255 v~~~~vlh~--~~d~~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 255 VLLKWVLHD--WNDEQSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp EEEESCGGG--SCHHHHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred EEEcccccC--CCHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 999999997 3456677999999999999 9999887
No 245
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.15 E-value=6.9e-10 Score=94.93 Aligned_cols=78 Identities=14% Similarity=0.006 Sum_probs=65.5
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||||||+|.++..++..+ .+|+|+|+++.+++.+++++.... ++.++++|+.+.++ +...||+
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~~~~---~v~vi~gD~l~~~~------~~~~fD~ 117 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKELYN---NIEIIWGDALKVDL------NKLDFNK 117 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHHCS---SEEEEESCTTTSCG------GGSCCSE
T ss_pred CCCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhccCC---CeEEEECchhhCCc------ccCCccE
Confidence 4578899999999999999998875 499999999999999999987432 78999999987666 4567999
Q ss_pred EEeccccc
Q 025059 109 VCCFQHLQ 116 (258)
Q Consensus 109 V~~~~~l~ 116 (258)
|+++...+
T Consensus 118 Iv~NlPy~ 125 (295)
T 3gru_A 118 VVANLPYQ 125 (295)
T ss_dssp EEEECCGG
T ss_pred EEEeCccc
Confidence 99876544
No 246
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.14 E-value=1.7e-10 Score=102.52 Aligned_cols=125 Identities=16% Similarity=0.139 Sum_probs=91.1
Q ss_pred HHHHHHHH-hcCCCCEEEEEcCCCCccHHHHHHcCC---------------------------------------CeEEE
Q 025059 20 AKTALIKI-YSHPYVTVCDLYCGAGVDVDKWETALI---------------------------------------ANYIG 59 (258)
Q Consensus 20 ~k~~li~~-~~~~~~~VLDlGcG~G~~~~~~~~~~~---------------------------------------~~v~g 59 (258)
+...++.. ...++.+|||++||+|.++..++.... .+++|
T Consensus 183 lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 262 (385)
T 3ldu_A 183 LAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYG 262 (385)
T ss_dssp HHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEE
T ss_pred HHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEE
Confidence 33334433 345788999999999999888765421 37999
Q ss_pred EecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccC-
Q 025059 60 IDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKP- 138 (258)
Q Consensus 60 vD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lkp- 138 (258)
+|+++.|++.|+++....+....+.|.++|+.+.+. +.+||+|+++-....-....+.+..+...+.+.|++
T Consensus 263 vDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~-------~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~ 335 (385)
T 3ldu_A 263 YDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS-------EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKL 335 (385)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC-------SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTS
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc-------CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhC
Confidence 999999999999999877655579999999866442 468999999754332122345667777777777776
Q ss_pred -CcEEEEEEcCchH
Q 025059 139 -GGYFLGITPDSST 151 (258)
Q Consensus 139 -gG~~i~~~~~~~~ 151 (258)
||.+.+.+++...
T Consensus 336 ~g~~~~iit~~~~l 349 (385)
T 3ldu_A 336 KNWSYYLITSYEDF 349 (385)
T ss_dssp BSCEEEEEESCTTH
T ss_pred CCCEEEEEECCHHH
Confidence 8888888776543
No 247
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.13 E-value=5.2e-10 Score=99.20 Aligned_cols=117 Identities=11% Similarity=0.034 Sum_probs=90.6
Q ss_pred hcCCCCEEEEEcCCCCccHHHHHHcCC---------------------------------------CeEEEEecChhHHH
Q 025059 28 YSHPYVTVCDLYCGAGVDVDKWETALI---------------------------------------ANYIGIDVATSGIG 68 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~~~~~~~---------------------------------------~~v~gvD~s~~~l~ 68 (258)
..+++..|||.+||+|.++..++.... .+++|+|+++.|++
T Consensus 191 ~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~ 270 (384)
T 3ldg_A 191 NWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVE 270 (384)
T ss_dssp TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHH
T ss_pred CCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHH
Confidence 345788999999999999887765321 35999999999999
Q ss_pred HHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccC--CcEEEEEE
Q 025059 69 EARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKP--GGYFLGIT 146 (258)
Q Consensus 69 ~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lkp--gG~~i~~~ 146 (258)
.|+++....+....+.+.++|+.+.+. ..+||+|+++-..+.-+...+.+..+...+.+.|++ ||.+.+.+
T Consensus 271 ~Ar~Na~~~gl~~~I~~~~~D~~~l~~-------~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 271 IARKNAREVGLEDVVKLKQMRLQDFKT-------NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp HHHHHHHHTTCTTTEEEEECCGGGCCC-------CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHHHHcCCCCceEEEECChHHCCc-------cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 999999887665569999999866443 358999999844332235567777787777777776 99998888
Q ss_pred cCchH
Q 025059 147 PDSST 151 (258)
Q Consensus 147 ~~~~~ 151 (258)
++...
T Consensus 344 ~~~~l 348 (384)
T 3ldg_A 344 NDTDF 348 (384)
T ss_dssp SCTTH
T ss_pred CCHHH
Confidence 87653
No 248
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.13 E-value=8e-11 Score=99.22 Aligned_cols=100 Identities=10% Similarity=-0.025 Sum_probs=77.3
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhc--C-CCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ--R-KNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~-~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
+.+.+|||||||+|..+..+++.+ .+++++|+++.+++.|+++++.. . ...+++++.+|+.. + . ++|
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~--~------~-~~f 140 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDL--D------I-KKY 140 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGS--C------C-CCE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHH--H------H-hhC
Confidence 356899999999999999888776 89999999999999998866431 0 11268899888743 2 1 689
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
|+|++... ... .+++.+.++|+|||++++...+
T Consensus 141 D~Ii~d~~-----dp~----~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 141 DLIFCLQE-----PDI----HRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp EEEEESSC-----CCH----HHHHHHHTTEEEEEEEEEEEEC
T ss_pred CEEEECCC-----ChH----HHHHHHHHhcCCCcEEEEEcCC
Confidence 99988631 222 3899999999999999987544
No 249
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.12 E-value=5.8e-10 Score=97.35 Aligned_cols=126 Identities=13% Similarity=0.003 Sum_probs=84.7
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcC---CC----ceeEEEEcCCCCCchhhhhhhcC
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQR---KN----FIAEFFEADPCAENFETQMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~---~~----~~~~~~~~d~~~~~~~~~~~~~~ 103 (258)
++.+||+||||+|..+..+++.+..+++++|+++.+++.|++.++... .. .+++++.+|+.. +........
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~--~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIP--VLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHH--HHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHH--HHHhhhccC
Confidence 468999999999999998888776799999999999999999875321 11 158999999743 211111135
Q ss_pred CceeEEEecccc-ccc-----cCCHHHHHHHHHHHHhcccCCcEEEEEEcCc--hHHHHHHHH
Q 025059 104 NQADLVCCFQHL-QMC-----FETEERARRLLQNVSSLLKPGGYFLGITPDS--STIWAKYQK 158 (258)
Q Consensus 104 ~~fD~V~~~~~l-~~~-----~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~--~~~~~~~~~ 158 (258)
++||+|++-..- ... +.+.+-...++..+.++|+|||+++....+. ..+...+.+
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~ 328 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEE 328 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHH
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHH
Confidence 789999875421 110 1123333444445599999999999884433 444444443
No 250
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.12 E-value=4.3e-10 Score=101.03 Aligned_cols=106 Identities=22% Similarity=0.095 Sum_probs=78.7
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|.++..++... .+++|+|+|+.|++.|+++...++.. +.|+++|+.+.. ..+||+
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~-~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~--------~~~fD~ 356 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRG-FNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVS--------VKGFDT 356 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCC--------CTTCSE
T ss_pred cCCCCEEEEeeccchHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcC--------ccCCCE
Confidence 4678899999999999999988764 49999999999999999998876543 899999986632 128999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHHH
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIW 153 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~ 153 (258)
|++...-.. . ...+++.+. .|+|||++++++ +...+.
T Consensus 357 Vv~dPPr~g--~----~~~~~~~l~-~l~p~givyvsc-~p~tla 393 (425)
T 2jjq_A 357 VIVDPPRAG--L----HPRLVKRLN-REKPGVIVYVSC-NPETFA 393 (425)
T ss_dssp EEECCCTTC--S----CHHHHHHHH-HHCCSEEEEEES-CHHHHH
T ss_pred EEEcCCccc--h----HHHHHHHHH-hcCCCcEEEEEC-ChHHHH
Confidence 988643211 1 123444444 489999988874 433333
No 251
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.12 E-value=2.6e-10 Score=101.51 Aligned_cols=123 Identities=19% Similarity=0.119 Sum_probs=88.5
Q ss_pred HHHHHH-hcCCCCEEEEEcCCCCccHHHHHHcCC---------------------------------------CeEEEEe
Q 025059 22 TALIKI-YSHPYVTVCDLYCGAGVDVDKWETALI---------------------------------------ANYIGID 61 (258)
Q Consensus 22 ~~li~~-~~~~~~~VLDlGcG~G~~~~~~~~~~~---------------------------------------~~v~gvD 61 (258)
..++.. ...++..|||++||+|.++..++.... .+++|+|
T Consensus 191 a~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvD 270 (393)
T 3k0b_A 191 AALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGD 270 (393)
T ss_dssp HHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEE
T ss_pred HHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEE
Confidence 334333 345788999999999999877765421 3599999
Q ss_pred cChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccC--C
Q 025059 62 VATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKP--G 139 (258)
Q Consensus 62 ~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lkp--g 139 (258)
+++.|++.|+++....+....+.+.++|+.+.+. ..+||+|+++-....-....+.+..+...+.+.|++ |
T Consensus 271 id~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~-------~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g 343 (393)
T 3k0b_A 271 IDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-------EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPT 343 (393)
T ss_dssp SCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC-------CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred CCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC-------CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCC
Confidence 9999999999999887665468999999866443 458999999843221112234556666666666665 9
Q ss_pred cEEEEEEcCchH
Q 025059 140 GYFLGITPDSST 151 (258)
Q Consensus 140 G~~i~~~~~~~~ 151 (258)
|.+.+.+++...
T Consensus 344 ~~~~iit~~~~l 355 (393)
T 3k0b_A 344 WSVYVLTSYELF 355 (393)
T ss_dssp CEEEEEECCTTH
T ss_pred CEEEEEECCHHH
Confidence 998888877653
No 252
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.11 E-value=1.2e-09 Score=98.59 Aligned_cols=111 Identities=17% Similarity=0.156 Sum_probs=79.1
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||+|||+|.++..++.. ..+++|+|+|+.+++.|+++...++.. ++.|+++|+.+... .++...++||+
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~l~--~~~~~~~~fD~ 359 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEEDVT--KQPWAKNGFDK 359 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSCCS--SSGGGTTCCSE
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHhh--hhhhhcCCCCE
Confidence 346789999999999999999877 459999999999999999998876544 79999999866210 00114568999
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHH
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~ 152 (258)
|++.-.-.. ...++..+.+ ++|+++++++ .+...+
T Consensus 360 Vv~dPPr~g-------~~~~~~~l~~-~~p~~ivyvs-c~p~tl 394 (433)
T 1uwv_A 360 VLLDPARAG-------AAGVMQQIIK-LEPIRIVYVS-CNPATL 394 (433)
T ss_dssp EEECCCTTC-------CHHHHHHHHH-HCCSEEEEEE-SCHHHH
T ss_pred EEECCCCcc-------HHHHHHHHHh-cCCCeEEEEE-CChHHH
Confidence 988543221 1234444443 7898887775 344333
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.09 E-value=1.8e-10 Score=104.20 Aligned_cols=112 Identities=18% Similarity=0.113 Sum_probs=83.7
Q ss_pred CCCEEEEEcCCCCccHHHHHHc--------------CCCeEEEEecChhHHHHHHHHHHhcCCCc-eeEEEEcCCCCCch
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA--------------LIANYIGIDVATSGIGEARDTWENQRKNF-IAEFFEADPCAENF 95 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~--------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~-~~~~~~~d~~~~~~ 95 (258)
++.+|||+|||+|+++..++.. ...+++|+|+++.+++.|+.++..++... ...+.++|....+.
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~ 250 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEP 250 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCC
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcc
Confidence 5679999999999999887654 12479999999999999998887654422 56789999865442
Q ss_pred hhhhhhcCCceeEEEeccccccccCC-------------HHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 96 ETQMQEKANQADLVCCFQHLQMCFET-------------EERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 96 ~~~~~~~~~~fD~V~~~~~l~~~~~~-------------~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
..+||+|+++-........ ......+++++.++|+|||.+.+.+|++
T Consensus 251 -------~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 251 -------STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDN 310 (445)
T ss_dssp -------SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred -------cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCc
Confidence 3489999997544321110 0112478999999999999999998764
No 254
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.07 E-value=2.6e-10 Score=102.02 Aligned_cols=102 Identities=20% Similarity=0.229 Sum_probs=76.7
Q ss_pred CCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
++.+|||+|||+|.++..+++. ...+++|+|+++.+++.| . ++.++++|+.+.. ..++||+
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------~----~~~~~~~D~~~~~-------~~~~fD~ 101 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------P----WAEGILADFLLWE-------PGEAFDL 101 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------T----TEEEEESCGGGCC-------CSSCEEE
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------C----CCcEEeCChhhcC-------ccCCCCE
Confidence 5679999999999999988875 446999999999999877 1 6789999975432 3478999
Q ss_pred EEeccccccccC--------CHHH-----------------HHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 109 VCCFQHLQMCFE--------TEER-----------------ARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 109 V~~~~~l~~~~~--------~~~~-----------------~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
|+++-.....-. ..+. ...+++.+.++|+|||.+++.+|+.
T Consensus 102 Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 102 ILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT 167 (421)
T ss_dssp EEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred EEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH
Confidence 999632211000 0111 2267999999999999999998875
No 255
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.03 E-value=1.9e-09 Score=91.14 Aligned_cols=111 Identities=14% Similarity=0.017 Sum_probs=77.3
Q ss_pred HHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh
Q 025059 18 EFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET 97 (258)
Q Consensus 18 ~~~k~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 97 (258)
+++...+-..-..++ +|||||||+|.++..++..+ .+|+|+|+++.|++.+++++... +++++++|+...++.
T Consensus 34 ~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~~----~v~vi~~D~l~~~~~- 106 (271)
T 3fut_A 34 AHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSGL----PVRLVFQDALLYPWE- 106 (271)
T ss_dssp HHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTTS----SEEEEESCGGGSCGG-
T ss_pred HHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCCC----CEEEEECChhhCChh-
Confidence 344443333335577 99999999999999998876 48999999999999999988642 799999999776652
Q ss_pred hhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 98 QMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 98 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
....+|.|+++...+. +.+-+..++.. ..-+.+++++.
T Consensus 107 ----~~~~~~~iv~NlPy~i---ss~il~~ll~~---~~~~~~~lm~Q 144 (271)
T 3fut_A 107 ----EVPQGSLLVANLPYHI---ATPLVTRLLKT---GRFARLVFLVQ 144 (271)
T ss_dssp ----GSCTTEEEEEEECSSC---CHHHHHHHHHH---CCEEEEEEEEE
T ss_pred ----hccCccEEEecCcccc---cHHHHHHHhcC---CCCCEEEEEee
Confidence 1136888877654332 34555555554 22234555554
No 256
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.01 E-value=4.1e-11 Score=99.91 Aligned_cols=103 Identities=9% Similarity=0.002 Sum_probs=72.5
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhc-CCcee
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK-ANQAD 107 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~fD 107 (258)
..++.+|||+|||+|.++..++..+ .+++|+|+|+.+++.|+++.... .+++++++|+.+.++ + +++|
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~~------~~~~~f- 95 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKLN---TRVTLIHQDILQFQF------PNKQRY- 95 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTTC---SEEEECCSCCTTTTC------CCSSEE-
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhccC---CceEEEECChhhcCc------ccCCCc-
Confidence 3477899999999999999998876 59999999999999988776522 278999999977654 3 3678
Q ss_pred EEEeccccccccCCHHHHHHHH--------------HHHHhcccCCcEEEEE
Q 025059 108 LVCCFQHLQMCFETEERARRLL--------------QNVSSLLKPGGYFLGI 145 (258)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l--------------~~i~~~LkpgG~~i~~ 145 (258)
.|+++...+ .+......++ +.+.++|+|||.+.+.
T Consensus 96 ~vv~n~Py~---~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 96 KIVGNIPYH---LSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp EEEEECCSS---SCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred EEEEeCCcc---ccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 555543221 1222222332 4577777777766543
No 257
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.01 E-value=2.5e-09 Score=89.60 Aligned_cols=75 Identities=13% Similarity=0.142 Sum_probs=60.7
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..++.+|||||||+|.++..++..+ .+++|+|+++.|++.+++++... .+++++++|+.+.++.... ..++||+
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~~---~~v~~i~~D~~~~~~~~~~--~~~~~~v 100 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQQ---KNITIYQNDALQFDFSSVK--TDKPLRV 100 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTTC---TTEEEEESCTTTCCGGGSC--CSSCEEE
T ss_pred CCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhhC---CCcEEEEcchHhCCHHHhc--cCCCeEE
Confidence 4578999999999999999998876 59999999999999999998652 2789999999887663221 1357884
Q ss_pred E
Q 025059 109 V 109 (258)
Q Consensus 109 V 109 (258)
|
T Consensus 101 v 101 (255)
T 3tqs_A 101 V 101 (255)
T ss_dssp E
T ss_pred E
Confidence 4
No 258
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.99 E-value=3.1e-09 Score=94.06 Aligned_cols=105 Identities=10% Similarity=0.002 Sum_probs=80.5
Q ss_pred CCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhc---------------CCCceeEEEEcCCCCCc
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ---------------RKNFIAEFFEADPCAEN 94 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~---------------~~~~~~~~~~~d~~~~~ 94 (258)
++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++.+.+ +.. ++.++++|+...
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~- 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRL- 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHH-
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHH-
Confidence 6789999999999999998887 5558999999999999999998876 443 488999997431
Q ss_pred hhhhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 95 FETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 95 ~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+....++||+|++.- . + . ...++..+.+.|+|||.++++..+.
T Consensus 125 ----~~~~~~~fD~I~lDP-~-~--~----~~~~l~~a~~~lk~gG~l~vt~td~ 167 (378)
T 2dul_A 125 ----MAERHRYFHFIDLDP-F-G--S----PMEFLDTALRSAKRRGILGVTATDG 167 (378)
T ss_dssp ----HHHSTTCEEEEEECC-S-S--C----CHHHHHHHHHHEEEEEEEEEEECCH
T ss_pred ----HHhccCCCCEEEeCC-C-C--C----HHHHHHHHHHhcCCCCEEEEEeecc
Confidence 111245899998542 1 1 1 2467888889999999998885443
No 259
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.98 E-value=3.7e-09 Score=93.77 Aligned_cols=107 Identities=16% Similarity=0.163 Sum_probs=82.6
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCce-eEEEEcCCCCCchhhhhh-hcCCc
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFI-AEFFEADPCAENFETQMQ-EKANQ 105 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~-~~~~~ 105 (258)
.++.+|||++||+|..+..++.. +..+++++|+++.+++.++++++.++...+ +.++++|+.. + +. ...++
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~--~---l~~~~~~~ 125 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANF--F---LRKEWGFG 125 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHH--H---HHSCCSSC
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHH--H---HHHhhCCC
Confidence 36789999999999999988875 346899999999999999999988776544 8999999733 1 11 12458
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
||+|++.- + .. ...++..+.++|+|||+++++..+.
T Consensus 126 fD~V~lDP---~--g~---~~~~l~~a~~~Lk~gGll~~t~t~~ 161 (392)
T 3axs_A 126 FDYVDLDP---F--GT---PVPFIESVALSMKRGGILSLTATDT 161 (392)
T ss_dssp EEEEEECC---S--SC---CHHHHHHHHHHEEEEEEEEEEECCH
T ss_pred CcEEEECC---C--cC---HHHHHHHHHHHhCCCCEEEEEecch
Confidence 99998754 1 11 2357888889999999998886543
No 260
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.98 E-value=5e-09 Score=92.44 Aligned_cols=112 Identities=12% Similarity=0.128 Sum_probs=79.4
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhc--------
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK-------- 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------- 102 (258)
.+.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|+++.+.++.. ++.|+++|+.+. ...+...
T Consensus 213 ~~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~-~v~~~~~d~~~~--~~~~~~~~~~~~l~~ 288 (369)
T 3bt7_A 213 SKGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHID-NVQIIRMAAEEF--TQAMNGVREFNRLQG 288 (369)
T ss_dssp CCSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCC-SEEEECCCSHHH--HHHHSSCCCCTTGGG
T ss_pred CCCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEECCHHHH--HHHHhhccccccccc
Confidence 4678999999999999988764 459999999999999999998877553 789999997432 1111100
Q ss_pred ----CCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHHHHHH
Q 025059 103 ----ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKY 156 (258)
Q Consensus 103 ----~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~~~~ 156 (258)
..+||+|++.-.-. .+...+.+.|+++|.++....+...+.+.+
T Consensus 289 ~~~~~~~fD~Vv~dPPr~----------g~~~~~~~~l~~~g~ivyvsc~p~t~ard~ 336 (369)
T 3bt7_A 289 IDLKSYQCETIFVDPPRS----------GLDSETEKMVQAYPRILYISCNPETLCKNL 336 (369)
T ss_dssp SCGGGCCEEEEEECCCTT----------CCCHHHHHHHTTSSEEEEEESCHHHHHHHH
T ss_pred cccccCCCCEEEECcCcc----------ccHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 13799998753211 123345556678899888888776554443
No 261
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.97 E-value=7.7e-10 Score=94.31 Aligned_cols=98 Identities=15% Similarity=0.005 Sum_probs=68.8
Q ss_pred cCCCCEEEEEcCCC------CccHHHHHHc-C-CCeEEEEecChhHHHHHHHHHHhcCCCceeEE-EEcCCCCCchhhhh
Q 025059 29 SHPYVTVCDLYCGA------GVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEF-FEADPCAENFETQM 99 (258)
Q Consensus 29 ~~~~~~VLDlGcG~------G~~~~~~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~ 99 (258)
++++.+|||||||+ |. ..++.. + .++|+|+|+|+. + . ++.+ +++|+.+.++
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v---------~----~v~~~i~gD~~~~~~---- 120 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V---------S----DADSTLIGDCATVHT---- 120 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B---------C----SSSEEEESCGGGCCC----
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C---------C----CCEEEEECccccCCc----
Confidence 45889999999955 65 223332 3 369999999998 1 1 5678 9999866443
Q ss_pred hhcCCceeEEEecccccc-------ccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 100 QEKANQADLVCCFQHLQM-------CFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 100 ~~~~~~fD~V~~~~~l~~-------~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
.++||+|++....+. ..........+++++.++|||||.|++.....
T Consensus 121 ---~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 121 ---ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp ---SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred ---cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 368999998653221 01112345689999999999999999976443
No 262
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.95 E-value=5.6e-09 Score=86.93 Aligned_cols=62 Identities=8% Similarity=0.024 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCch
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (258)
.++.+|||+|||+|.++..++..+ .+++|+|+|+.+++.++++..... ++.++++|+.+.++
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~D~~~~~~ 90 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDHD---NFQVLNKDILQFKF 90 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTCC---SEEEECCCGGGCCC
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccCC---CeEEEEChHHhCCc
Confidence 478899999999999999998877 599999999999999999876432 78999999876554
No 263
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.95 E-value=6.5e-09 Score=89.51 Aligned_cols=114 Identities=11% Similarity=-0.017 Sum_probs=79.6
Q ss_pred CCCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
.++.+|||+|||+|+.+..++.. +.++|+++|+++.+++.++++++..+.. ++.++++|+...... .. ...+||
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~~~~--~~-~~~~fD 176 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAVSPS--DP-RYHEVH 176 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGSCTT--CG-GGTTEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhcCcc--cc-ccCCCC
Confidence 47899999999999999988775 4469999999999999999999876543 689999997553321 00 115799
Q ss_pred EEEecc-----c-cccc----------cCCHH----HHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 108 LVCCFQ-----H-LQMC----------FETEE----RARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 108 ~V~~~~-----~-l~~~----------~~~~~----~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
.|++.. + +... -.... ....++.++.++|+ ||.++.++..
T Consensus 177 ~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 177 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp EEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred EEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 998731 1 1100 00111 12457888888887 9998877554
No 264
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.90 E-value=3.5e-09 Score=97.90 Aligned_cols=114 Identities=16% Similarity=0.113 Sum_probs=83.0
Q ss_pred CCCEEEEEcCCCCccHHHHHHc----C---------------CCeEEEEecChhHHHHHHHHHHhcCCCc----eeEEEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA----L---------------IANYIGIDVATSGIGEARDTWENQRKNF----IAEFFE 87 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~----~---------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~----~~~~~~ 87 (258)
++.+|||.|||+|+++..++.. . ...++|+|+++.++..|+.++..++... +..+.+
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 5789999999999998877653 1 1379999999999999998876654431 167889
Q ss_pred cCCCCCchhhhhhhcCCceeEEEeccccccccC----------CHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 88 ADPCAENFETQMQEKANQADLVCCFQHLQMCFE----------TEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 88 ~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~----------~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+|....+.. ...+||+|+++-....... .......++..+.+.|+|||.+.+.+|++
T Consensus 249 gDtL~~~~~-----~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 249 GNTLGSDGE-----NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp SCTTSHHHH-----TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CCCcccccc-----cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 997543211 3578999999754332111 01122478999999999999999998876
No 265
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.83 E-value=2.1e-08 Score=83.91 Aligned_cols=115 Identities=18% Similarity=0.176 Sum_probs=74.3
Q ss_pred hcCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
.++++.+|||||||+|+++..++.. +...+.|+|++-.+..... .....+.++.....++....+ +.++|
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi---~~~~~g~~ii~~~~~~dv~~l------~~~~~ 141 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPM---NVQSLGWNIITFKDKTDIHRL------EPVKC 141 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCC---CCCBTTGGGEEEECSCCTTTS------CCCCC
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccc---ccCcCCCCeEEEeccceehhc------CCCCc
Confidence 4568889999999999999987665 4557889998854311100 001011134445665533333 56789
Q ss_pred eEEEeccccccccCC-HHHHH--HHHHHHHhcccCC-cEEEEEEcC--chHH
Q 025059 107 DLVCCFQHLQMCFET-EERAR--RLLQNVSSLLKPG-GYFLGITPD--SSTI 152 (258)
Q Consensus 107 D~V~~~~~l~~~~~~-~~~~~--~~l~~i~~~Lkpg-G~~i~~~~~--~~~~ 152 (258)
|+|+|-.+.+ .-.. .+... .++..+.++|+|| |.|++-+.. +...
T Consensus 142 DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~ 192 (277)
T 3evf_A 142 DTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDV 192 (277)
T ss_dssp SEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHH
T ss_pred cEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccH
Confidence 9999987665 1111 12222 3478889999999 999999888 5443
No 266
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.83 E-value=4.9e-08 Score=82.78 Aligned_cols=74 Identities=12% Similarity=0.161 Sum_probs=57.0
Q ss_pred HHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHcCC---CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCc
Q 025059 18 EFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALI---ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAEN 94 (258)
Q Consensus 18 ~~~k~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~ 94 (258)
+++...+-..-..++.+|||||||+|.++..++.... .+++|+|+++.|++.++++. .. +++++++|+.+.+
T Consensus 29 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~~----~v~~i~~D~~~~~ 103 (279)
T 3uzu_A 29 GVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-GE----LLELHAGDALTFD 103 (279)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-GG----GEEEEESCGGGCC
T ss_pred HHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-CC----CcEEEECChhcCC
Confidence 3444333222345789999999999999999988754 23999999999999999884 22 7899999998776
Q ss_pred hh
Q 025059 95 FE 96 (258)
Q Consensus 95 ~~ 96 (258)
+.
T Consensus 104 ~~ 105 (279)
T 3uzu_A 104 FG 105 (279)
T ss_dssp GG
T ss_pred hh
Confidence 63
No 267
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.82 E-value=7.4e-09 Score=95.72 Aligned_cols=116 Identities=14% Similarity=0.007 Sum_probs=80.7
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc--------C--------CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCC
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA--------L--------IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA 92 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~--------~--------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~ 92 (258)
.+...+|||.|||+|+++..+... . ...++|+|+++.++..|+.++..++...++.+.++|...
T Consensus 242 ~p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~ 321 (544)
T 3khk_A 242 EPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFL 321 (544)
T ss_dssp CCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTT
T ss_pred hcCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhc
Confidence 333349999999999998876432 0 237999999999999999988776554344447777654
Q ss_pred CchhhhhhhcCCceeEEEeccccccc------------------------cCCH-HHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 93 ENFETQMQEKANQADLVCCFQHLQMC------------------------FETE-ERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 93 ~~~~~~~~~~~~~fD~V~~~~~l~~~------------------------~~~~-~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
.+.. +..+||+|+++-..... .... ..--.++..+.+.|+|||.+.+.+|
T Consensus 322 ~~~~-----~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 322 DDQH-----PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp SCSC-----TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred Cccc-----ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEec
Confidence 3321 35789999996432210 0001 1112689999999999999999988
Q ss_pred Cc
Q 025059 148 DS 149 (258)
Q Consensus 148 ~~ 149 (258)
++
T Consensus 397 ~g 398 (544)
T 3khk_A 397 NG 398 (544)
T ss_dssp TH
T ss_pred ch
Confidence 75
No 268
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.82 E-value=2.1e-08 Score=95.40 Aligned_cols=125 Identities=14% Similarity=0.052 Sum_probs=85.3
Q ss_pred HHHHHH-hcCCCCEEEEEcCCCCccHHHHHHcC-------------------------------------------CCeE
Q 025059 22 TALIKI-YSHPYVTVCDLYCGAGVDVDKWETAL-------------------------------------------IANY 57 (258)
Q Consensus 22 ~~li~~-~~~~~~~VLDlGcG~G~~~~~~~~~~-------------------------------------------~~~v 57 (258)
..++.. ..+++..|||.+||+|.++...+... ...+
T Consensus 180 a~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i 259 (703)
T 3v97_A 180 AAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHF 259 (703)
T ss_dssp HHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_pred HHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccE
Confidence 334433 34578899999999999987766431 1379
Q ss_pred EEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEEeccccccccCCHHHHHH---HHHHHHh
Q 025059 58 IGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARR---LLQNVSS 134 (258)
Q Consensus 58 ~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~---~l~~i~~ 134 (258)
+|+|+++.|++.|+.++...+....+.|.++|+.+... +...++||+|+++-....-+...+.+.. .+.++.+
T Consensus 260 ~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~----~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk 335 (703)
T 3v97_A 260 YGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN----PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK 335 (703)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCC----SCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCcc----ccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHH
Confidence 99999999999999999887766568999999865321 0012389999998332211122333434 4445555
Q ss_pred cccCCcEEEEEEcCch
Q 025059 135 LLKPGGYFLGITPDSS 150 (258)
Q Consensus 135 ~LkpgG~~i~~~~~~~ 150 (258)
.+.|||.+.+.+++..
T Consensus 336 ~~~~g~~~~ilt~~~~ 351 (703)
T 3v97_A 336 NQFGGWNLSLFSASPD 351 (703)
T ss_dssp HHCTTCEEEEEESCHH
T ss_pred hhCCCCeEEEEeCCHH
Confidence 5668999999877754
No 269
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.81 E-value=4.2e-09 Score=88.43 Aligned_cols=83 Identities=16% Similarity=0.073 Sum_probs=60.1
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecCh-------hHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcC
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVAT-------SGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~-------~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (258)
++.+|||+|||+|.++..++..+. +|+|+|+|+ .+++.|+++.+.++...+++++++|+.+ +.+.+++..
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~--~l~~~~~~~ 159 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAE--QMPALVKTQ 159 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHH--HHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHH--HHHhhhccC
Confidence 568999999999999999988754 899999999 9999998766543322258999999743 111121111
Q ss_pred CceeEEEeccccc
Q 025059 104 NQADLVCCFQHLQ 116 (258)
Q Consensus 104 ~~fD~V~~~~~l~ 116 (258)
++||+|++.-..+
T Consensus 160 ~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 160 GKPDIVYLDPMYP 172 (258)
T ss_dssp CCCSEEEECCCC-
T ss_pred CCccEEEECCCCC
Confidence 6899999865433
No 270
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.78 E-value=6.6e-08 Score=89.25 Aligned_cols=116 Identities=17% Similarity=0.090 Sum_probs=84.7
Q ss_pred CCCEEEEEcCCCCccHHHHHHc----CCCeEEEEecChhHHHHHHHHHHhcCCC-ceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA----LIANYIGIDVATSGIGEARDTWENQRKN-FIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~----~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
++.+|||.|||+|+++..+... +...++|+|+++.++..|+.++..++.. .++.+.++|....... . ....+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p-~--~~~~~ 297 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWP-T--QEPTN 297 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSC-C--SSCCC
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccc-c--ccccc
Confidence 6789999999999999888765 2458999999999999999887766543 2578999998654210 0 04578
Q ss_pred eeEEEecccccccc------------------CCHH-HHHHHHHHHHhccc-CCcEEEEEEcCc
Q 025059 106 ADLVCCFQHLQMCF------------------ETEE-RARRLLQNVSSLLK-PGGYFLGITPDS 149 (258)
Q Consensus 106 fD~V~~~~~l~~~~------------------~~~~-~~~~~l~~i~~~Lk-pgG~~i~~~~~~ 149 (258)
||+|+++-...... .+.. .--.++..+.+.|+ |||++.+.+|++
T Consensus 298 fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 298 FDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp BSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred ccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 99999873221100 0000 01258999999999 999999998886
No 271
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.76 E-value=1.7e-08 Score=86.59 Aligned_cols=81 Identities=14% Similarity=0.069 Sum_probs=63.0
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh-cCCce
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQA 106 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~f 106 (258)
..++.+|||+|||+|+.+..++... ..+++|+|+|+.|++.|+++....+ .++.++++|+.+.+ ..+.. ...+|
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~--~~l~~~g~~~~ 99 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREAD--FLLKTLGIEKV 99 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHH--HHHHHTTCSCE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHH--HHHHhcCCCCC
Confidence 3578899999999999999998873 4699999999999999999987654 27999999975532 11111 12589
Q ss_pred eEEEecc
Q 025059 107 DLVCCFQ 113 (258)
Q Consensus 107 D~V~~~~ 113 (258)
|.|++..
T Consensus 100 D~Vl~D~ 106 (301)
T 1m6y_A 100 DGILMDL 106 (301)
T ss_dssp EEEEEEC
T ss_pred CEEEEcC
Confidence 9998754
No 272
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.76 E-value=3.1e-08 Score=82.70 Aligned_cols=62 Identities=13% Similarity=0.061 Sum_probs=53.2
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCch
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (258)
..++.+|||||||+|.++..++..+..+++|+|+++.+++.++++ .. .+++++++|+...++
T Consensus 29 ~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~~----~~v~~i~~D~~~~~~ 90 (249)
T 3ftd_A 29 IEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-GD----ERLEVINEDASKFPF 90 (249)
T ss_dssp CCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-CC----TTEEEECSCTTTCCG
T ss_pred CCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-cC----CCeEEEEcchhhCCh
Confidence 447889999999999999999887656999999999999999877 21 278999999988766
No 273
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.75 E-value=1.8e-08 Score=94.03 Aligned_cols=102 Identities=15% Similarity=0.101 Sum_probs=75.6
Q ss_pred CCEEEEEcCCCCccHHHHHHc---CCC--eEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 32 YVTVCDLYCGAGVDVDKWETA---LIA--NYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~~~~---~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
+..|||+|||+|.++...++. ... +|++++.|+ +...|++....++++.+++++++|+.+..+ +++.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~L-------PEKV 429 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVA-------PEKA 429 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCC-------SSCE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccC-------Cccc
Confidence 357999999999885444333 322 689999997 455677777777777799999999988765 5799
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i 143 (258)
|+|++-. +.+.+..+. ....+....+.|||||+++
T Consensus 430 DIIVSEw-MG~fLl~E~-mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 430 DIIVSEL-LGSFADNEL-SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEECCC-CBTTBGGGC-HHHHHHHHGGGEEEEEEEE
T ss_pred CEEEEEc-CcccccccC-CHHHHHHHHHhcCCCcEEc
Confidence 9998854 333333333 3367888899999999874
No 274
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.73 E-value=2.9e-07 Score=81.04 Aligned_cols=114 Identities=14% Similarity=0.100 Sum_probs=73.7
Q ss_pred CCEEEEEcCCCCccHHHHHHc----------------CCCeEEEEecChhHHHHHHHHHHhcCC-----------CceeE
Q 025059 32 YVTVCDLYCGAGVDVDKWETA----------------LIANYIGIDVATSGIGEARDTWENQRK-----------NFIAE 84 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~~~~----------------~~~~v~gvD~s~~~l~~a~~~~~~~~~-----------~~~~~ 84 (258)
..+|+|+|||+|.++..+... +.-++...|+..+.....-+.++.... ..+..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 578999999999998877221 112677888877776655444443210 00112
Q ss_pred EEEcCCCCCchhhhhhhcCCceeEEEeccccccccCCH----------------------------------HHHHHHHH
Q 025059 85 FFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETE----------------------------------ERARRLLQ 130 (258)
Q Consensus 85 ~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~----------------------------------~~~~~~l~ 130 (258)
|+.+...+ +...+. +++++|+|.++.++||+-... .+...+|+
T Consensus 133 f~~gvpgS--Fy~rlf-P~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~ 209 (374)
T 3b5i_A 133 FVAGVPGS--FYRRLF-PARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLR 209 (374)
T ss_dssp EEEEEESC--TTSCCS-CTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChh--hhcccC-CCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 22222211 111110 689999999999999953211 26677899
Q ss_pred HHHhcccCCcEEEEEEcC
Q 025059 131 NVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 131 ~i~~~LkpgG~~i~~~~~ 148 (258)
..++.|+|||.+++++..
T Consensus 210 ~ra~eL~pGG~mvl~~~g 227 (374)
T 3b5i_A 210 ARAAEVKRGGAMFLVCLG 227 (374)
T ss_dssp HHHHHEEEEEEEEEEEEE
T ss_pred HHHHHhCCCCEEEEEEec
Confidence 999999999999999654
No 275
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.73 E-value=7.9e-08 Score=80.33 Aligned_cols=78 Identities=9% Similarity=-0.079 Sum_probs=57.2
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCe--EEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIAN--YIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~--v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
..++.+|||||||+|.++. +.. . .+ ++|+|+++.|++.++++..... +++++++|+...++...... .+..
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~~---~v~~i~~D~~~~~~~~~~~~-~~~~ 91 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLGP---KLTIYQQDAMTFNFGELAEK-MGQP 91 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTGG---GEEEECSCGGGCCHHHHHHH-HTSC
T ss_pred CCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccCC---ceEEEECchhhCCHHHhhcc-cCCc
Confidence 4578899999999999999 654 3 36 9999999999999998775432 78999999977665322100 1234
Q ss_pred eEEEecc
Q 025059 107 DLVCCFQ 113 (258)
Q Consensus 107 D~V~~~~ 113 (258)
|.|+++.
T Consensus 92 ~~vvsNl 98 (252)
T 1qyr_A 92 LRVFGNL 98 (252)
T ss_dssp EEEEEEC
T ss_pred eEEEECC
Confidence 6666654
No 276
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.70 E-value=3.3e-08 Score=82.81 Aligned_cols=115 Identities=18% Similarity=0.148 Sum_probs=73.6
Q ss_pred hcCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
++.++.+|||||||+|++++.++.. +...++|+|++..+...+.. ....+.++.....++....+ +..++
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~---~~~~g~~ii~~~~~~dv~~l------~~~~~ 157 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM---RTTLGWNLIRFKDKTDVFNM------EVIPG 157 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC---CCBTTGGGEEEECSCCGGGS------CCCCC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc---cccCCCceEEeeCCcchhhc------CCCCc
Confidence 4568889999999999999987754 55679999998764322211 00011233333433321122 56899
Q ss_pred eEEEeccccccccC-CHHHHH--HHHHHHHhcccCC--cEEEEEEcC--chHH
Q 025059 107 DLVCCFQHLQMCFE-TEERAR--RLLQNVSSLLKPG--GYFLGITPD--SSTI 152 (258)
Q Consensus 107 D~V~~~~~l~~~~~-~~~~~~--~~l~~i~~~Lkpg--G~~i~~~~~--~~~~ 152 (258)
|+|+|-.+.. .=. ..++.. .++.-+..+|+|| |.|++-+.. +...
T Consensus 158 DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~ 209 (282)
T 3gcz_A 158 DTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLI 209 (282)
T ss_dssp SEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHH
T ss_pred CEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccH
Confidence 9999987665 111 122222 3577788999999 999999888 5443
No 277
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.67 E-value=3.2e-07 Score=73.87 Aligned_cols=104 Identities=5% Similarity=-0.132 Sum_probs=73.2
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCC--CceeEEEEcCCCCCc-------------h
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRK--NFIAEFFEADPCAEN-------------F 95 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~~~~~~~d~~~~~-------------~ 95 (258)
+..+|||+||| ..+..+++...++|+.+|.+++..+.|++.++..+. ..+++++.+|+.... +
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 46799999985 444555443346999999999999999999988765 558999999975421 1
Q ss_pred h---hhhhh--cCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 96 E---TQMQE--KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 96 ~---~~~~~--~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
. ..+.. ..++||+|++-... ....+..+.+.|+|||++++.
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~k---------~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGRF---------RVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSSS---------HHHHHHHHHHHCSSCEEEEET
T ss_pred HHHhhhhhccccCCCCCEEEEeCCC---------chhHHHHHHHhcCCCeEEEEe
Confidence 1 00001 23789999876521 125556677999999999764
No 278
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.66 E-value=2.2e-08 Score=89.16 Aligned_cols=78 Identities=17% Similarity=0.056 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhc--CCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ--RKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
.++.+|||+|||+|.++..++..+. +|+|+|+|+.+++.|+++.+.. +. .++.++++|+.+. + +.. ..++||
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~-L-~~~--~~~~fD 165 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEY-L-PLI--KTFHPD 165 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGS-H-HHH--HHHCCS
T ss_pred CCCCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHh-h-hhc--cCCCce
Confidence 3589999999999999988877654 9999999999999999998865 43 3799999998542 1 111 235899
Q ss_pred EEEecc
Q 025059 108 LVCCFQ 113 (258)
Q Consensus 108 ~V~~~~ 113 (258)
+|++.-
T Consensus 166 vV~lDP 171 (410)
T 3ll7_A 166 YIYVDP 171 (410)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 998853
No 279
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.64 E-value=2.9e-07 Score=87.43 Aligned_cols=116 Identities=14% Similarity=0.066 Sum_probs=76.8
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcC----CCeEEEEecChhHHHHHHHHHHhc--C--CCce-eEEEEcCCCCCchhhhhh
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETAL----IANYIGIDVATSGIGEARDTWENQ--R--KNFI-AEFFEADPCAENFETQMQ 100 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~----~~~v~gvD~s~~~l~~a~~~~~~~--~--~~~~-~~~~~~d~~~~~~~~~~~ 100 (258)
+++.+|||.|||+|.++..++... ..+++|+|+++.+++.|+.+.... . .+.. ..+...|+.....
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~----- 394 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNP----- 394 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCG-----
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccc-----
Confidence 357899999999999999887653 247999999999999995443221 1 1111 2444444432111
Q ss_pred hcCCceeEEEeccccccccCCHH-------------------------HHHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 101 EKANQADLVCCFQHLQMCFETEE-------------------------RARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 101 ~~~~~fD~V~~~~~l~~~~~~~~-------------------------~~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
....+||+|+++-.......... ....++..+.+.|+|||.+.+.+|++-
T Consensus 395 ~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~ 469 (878)
T 3s1s_A 395 EDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQY 469 (878)
T ss_dssp GGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHH
T ss_pred cccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHH
Confidence 13578999999753311011111 133578889999999999999999873
No 280
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.60 E-value=4.4e-07 Score=80.04 Aligned_cols=112 Identities=14% Similarity=0.053 Sum_probs=71.8
Q ss_pred CCEEEEEcCCCCccHHHHHHc-----------------CC-CeEEEEecC-----------hhHHHHHHHHHHhcCCCce
Q 025059 32 YVTVCDLYCGAGVDVDKWETA-----------------LI-ANYIGIDVA-----------TSGIGEARDTWENQRKNFI 82 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~~~~-----------------~~-~~v~gvD~s-----------~~~l~~a~~~~~~~~~~~~ 82 (258)
..+|+|+||++|.++..+... .+ -++...|+. +.+.+.+++. .+...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---NGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---TCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---ccCCCC
Confidence 578999999999998877553 01 267778877 3333322221 111123
Q ss_pred eEEEEcCCCCCchhhhhhhcCCceeEEEeccccccccCCH-----------------------------------HHHHH
Q 025059 83 AEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETE-----------------------------------ERARR 127 (258)
Q Consensus 83 ~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~-----------------------------------~~~~~ 127 (258)
..|+.+...+ +...+. +.+++|+|.++.++||+-... .+...
T Consensus 130 ~~f~~gvpgS--Fy~rlf-p~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 130 SCLIGAMPGS--FYSRLF-PEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp SEEEEECCSC--TTSCCS-CTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchh--hhhccC-CCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHH
Confidence 4566665432 211111 689999999999999953221 13345
Q ss_pred HHHHHHhcccCCcEEEEEEcCc
Q 025059 128 LLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 128 ~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+|+..++.|+|||.+++++...
T Consensus 207 FL~~Ra~eL~pGG~mvl~~~gr 228 (384)
T 2efj_A 207 FLRIHSEELISRGRMLLTFICK 228 (384)
T ss_dssp HHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHhccCCeEEEEEecC
Confidence 5888899999999999996643
No 281
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.60 E-value=4.5e-07 Score=79.48 Aligned_cols=128 Identities=13% Similarity=0.002 Sum_probs=86.0
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhc-------CCCceeEEEEcCCCCCchhhhhhhc
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ-------RKNFIAEFFEADPCAENFETQMQEK 102 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~~ 102 (258)
+++.+||=||.|.|+.+..+++.+..+++.+||++.+++.|++.++.. ....+++++.+|+.. +.......
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~--fl~~~~~~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIP--VLKRYAKE 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHH--HHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHH--HHHhhhhc
Confidence 466899999999999999998887789999999999999999876431 111247888888632 22222224
Q ss_pred CCceeEEEecccccc-c-----cCCHHHHHHHHHHHHhcccCCcEEEEE--EcCchHHHHHHHHh
Q 025059 103 ANQADLVCCFQHLQM-C-----FETEERARRLLQNVSSLLKPGGYFLGI--TPDSSTIWAKYQKN 159 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~-~-----~~~~~~~~~~l~~i~~~LkpgG~~i~~--~~~~~~~~~~~~~~ 159 (258)
.++||+|+.-..-.. . .....-.+.+++.+.++|+|||+++.. .|........+.+.
T Consensus 282 ~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~t 346 (381)
T 3c6k_A 282 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQ 346 (381)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHH
T ss_pred cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHH
Confidence 578999986421100 0 001223467899999999999999876 34433333344433
No 282
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.58 E-value=1.1e-07 Score=89.03 Aligned_cols=108 Identities=15% Similarity=0.025 Sum_probs=73.4
Q ss_pred CCEEEEEcCCCCccHHHHHHc----C----------CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh
Q 025059 32 YVTVCDLYCGAGVDVDKWETA----L----------IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET 97 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~~~~----~----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 97 (258)
+..|||+|||+|.++...+.. + ..+|+++|.|+.++..++.+.. ++++.+++++.+|+.+..+-.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 468999999999986432111 1 2389999999988876665554 555558999999997644300
Q ss_pred hhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEE
Q 025059 98 QMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (258)
Q Consensus 98 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i 143 (258)
. .+..++.|+|++-.. .+... .+-....+..+.+.|+|||++|
T Consensus 489 ~-~~~~ekVDIIVSElm-Gsfl~-nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 K-DRGFEQPDIIVSELL-GSFGD-NELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp H-HTTCCCCSEEEECCC-BTTBG-GGSHHHHHHTTGGGSCTTCEEE
T ss_pred c-cCCCCcccEEEEecc-ccccc-hhccHHHHHHHHHhCCCCcEEE
Confidence 0 012679999998653 33222 2334567777889999999864
No 283
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.54 E-value=2.5e-07 Score=78.64 Aligned_cols=114 Identities=11% Similarity=0.070 Sum_probs=82.6
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhc----CCCceeEEEEcCCCCCchhhhhhhcC
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ----RKNFIAEFFEADPCAENFETQMQEKA 103 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (258)
.+...+||=||.|.|+.+..+++. +..+++.+||++.+++.|++.++.. -...+++++.+|...- +....
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~-----l~~~~ 155 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF-----VNQTS 155 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTT-----TSCSS
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHH-----Hhhcc
Confidence 345689999999999999999887 4579999999999999999877531 1133799999998652 12256
Q ss_pred CceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
++||+|++-..=.......---..+++.++++|+|||+++....
T Consensus 156 ~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 156 QTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp CCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecC
Confidence 79999987431110000000125789999999999999998743
No 284
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.52 E-value=3e-07 Score=80.45 Aligned_cols=110 Identities=15% Similarity=0.097 Sum_probs=78.9
Q ss_pred CCEEEEEcCCCCccHHHHHHc---------------CC--CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCC--
Q 025059 32 YVTVCDLYCGAGVDVDKWETA---------------LI--ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-- 92 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~~~~---------------~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-- 92 (258)
..+|+|+||++|.++..+... .. -++...|+..+....+.+.++......+..|+.+...+
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 467999999999888765433 11 27889999999998887776542110023454443322
Q ss_pred -CchhhhhhhcCCceeEEEeccccccccCC-----------------------------HHHHHHHHHHHHhcccCCcEE
Q 025059 93 -ENFETQMQEKANQADLVCCFQHLQMCFET-----------------------------EERARRLLQNVSSLLKPGGYF 142 (258)
Q Consensus 93 -~~~~~~~~~~~~~fD~V~~~~~l~~~~~~-----------------------------~~~~~~~l~~i~~~LkpgG~~ 142 (258)
..+ +.+++|+|.++.++||+-.. ..+...+|+..++.|+|||.+
T Consensus 132 ~rlf------p~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~m 205 (359)
T 1m6e_X 132 GRLF------PRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRM 205 (359)
T ss_dssp SCCS------CTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEE
T ss_pred hccC------CCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence 223 68999999999999995321 246778899999999999999
Q ss_pred EEEEc
Q 025059 143 LGITP 147 (258)
Q Consensus 143 i~~~~ 147 (258)
++++.
T Consensus 206 vl~~~ 210 (359)
T 1m6e_X 206 VLTIL 210 (359)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99955
No 285
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.43 E-value=6.4e-07 Score=75.52 Aligned_cols=117 Identities=15% Similarity=0.088 Sum_probs=72.7
Q ss_pred HhcCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 27 IYSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 27 ~~~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
.+++++.+||||||++|+++..++.. +...++|+|+...+...... . ...+.++.....++.-..+ ..+.
T Consensus 77 ~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~--~~~~~~iv~~~~~~di~~l------~~~~ 147 (300)
T 3eld_A 77 GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-M--QTLGWNIVKFKDKSNVFTM------PTEP 147 (300)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-C--CBTTGGGEEEECSCCTTTS------CCCC
T ss_pred CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-c--cccCCceEEeecCceeeec------CCCC
Confidence 35668999999999999999999875 55579999997643211000 0 0001122222322221122 4578
Q ss_pred eeEEEeccccccccC-CHHHH--HHHHHHHHhcccCC-cEEEEEEcC--chHHH
Q 025059 106 ADLVCCFQHLQMCFE-TEERA--RRLLQNVSSLLKPG-GYFLGITPD--SSTIW 153 (258)
Q Consensus 106 fD~V~~~~~l~~~~~-~~~~~--~~~l~~i~~~Lkpg-G~~i~~~~~--~~~~~ 153 (258)
+|+|+|-.+.. .=. ..+.. ..++.-+..+|+|| |.|++-+.. +....
T Consensus 148 ~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~ 200 (300)
T 3eld_A 148 SDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVI 200 (300)
T ss_dssp CSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHH
T ss_pred cCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHH
Confidence 99999977655 111 11111 33477788999999 999999888 65433
No 286
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.34 E-value=5.2e-07 Score=68.24 Aligned_cols=88 Identities=17% Similarity=0.156 Sum_probs=60.8
Q ss_pred HhcCCCCEEEEEcCCCC-ccHHHHHH-cCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCC
Q 025059 27 IYSHPYVTVCDLYCGAG-VDVDKWET-ALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (258)
Q Consensus 27 ~~~~~~~~VLDlGcG~G-~~~~~~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (258)
+...++.+|||+|||+| ..+..++. .+. .|+++|+++.+++ +++.|+++..+. .-.
T Consensus 31 ~~~~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~----------------~v~dDiF~P~~~-----~Y~ 88 (153)
T 2k4m_A 31 RCSGPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG----------------IVRDDITSPRME-----IYR 88 (153)
T ss_dssp HHSCSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT----------------EECCCSSSCCHH-----HHT
T ss_pred hcCCCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc----------------eEEccCCCCccc-----ccC
Confidence 33355689999999999 58888876 565 8999999988866 788998775441 114
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.||+|.+.- ...++...+.++++.+ |.-+++.
T Consensus 89 ~~DLIYsir-------PP~El~~~i~~lA~~v--~adliI~ 120 (153)
T 2k4m_A 89 GAALIYSIR-------PPAEIHSSLMRVADAV--GARLIIK 120 (153)
T ss_dssp TEEEEEEES-------CCTTTHHHHHHHHHHH--TCEEEEE
T ss_pred CcCEEEEcC-------CCHHHHHHHHHHHHHc--CCCEEEE
Confidence 899996543 3344555555555543 4556665
No 287
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.29 E-value=3.8e-06 Score=73.52 Aligned_cols=115 Identities=17% Similarity=0.014 Sum_probs=80.6
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCC-CeEEEEecChhHHHHHHHHHHhcCC-----CceeEEEEcCCCCCchhhhhhhc
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRK-----NFIAEFFEADPCAENFETQMQEK 102 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~ 102 (258)
.+||.+|||+|+|.|+=+..++.... +.++++|+++.-+...++++...+. ..++.+...|....+- . .
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~---~--~ 220 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE---L--E 220 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHH---H--S
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcch---h--c
Confidence 34889999999999998888877643 4799999999999988888765421 2357778887643211 1 3
Q ss_pred CCceeEEEeccccc----ccc---------CCH-------HHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 103 ANQADLVCCFQHLQ----MCF---------ETE-------ERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 103 ~~~fD~V~~~~~l~----~~~---------~~~-------~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
.+.||.|++-.... ... .+. .-..++|.+..++|||||.++-++++
T Consensus 221 ~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCS 286 (359)
T 4fzv_A 221 GDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCS 286 (359)
T ss_dssp TTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred cccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCC
Confidence 57899998632110 000 011 12357889999999999999888655
No 288
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.26 E-value=3.9e-06 Score=70.58 Aligned_cols=76 Identities=11% Similarity=0.045 Sum_probs=59.8
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh-cCCcee
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQAD 107 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~fD 107 (258)
..++..+||.+||.|+++..++.. .++|+|+|.++.+++.|++ +.. .++.++++|..+ +...+.. ..+++|
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~--l~~~L~~~g~~~vD 91 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRH--LKRHLAALGVERVD 91 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGG--HHHHHHHTTCSCEE
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcch--HHHHHHHcCCCCcC
Confidence 457899999999999999999988 4599999999999999998 654 279999999755 3222221 225799
Q ss_pred EEEec
Q 025059 108 LVCCF 112 (258)
Q Consensus 108 ~V~~~ 112 (258)
.|++.
T Consensus 92 gIL~D 96 (285)
T 1wg8_A 92 GILAD 96 (285)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 99763
No 289
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.24 E-value=5e-06 Score=76.63 Aligned_cols=116 Identities=15% Similarity=0.050 Sum_probs=79.2
Q ss_pred CCCEEEEEcCCCCccHHHHHHc--------------CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchh
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA--------------LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE 96 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~--------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 96 (258)
++.+|+|.+||+|+++...... ....++|+|+++.+...|+-++--++.. ...+.++|....+..
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~-~~~I~~~dtL~~~~~ 295 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE-YPRIDPENSLRFPLR 295 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS-CCEEECSCTTCSCGG
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc-cccccccccccCchh
Confidence 5779999999999998776542 1236999999999999998877655432 346778887654432
Q ss_pred hhhhhcCCceeEEEeccccccc------------cCCHHHHHHHHHHHHhccc-------CCcEEEEEEcCc
Q 025059 97 TQMQEKANQADLVCCFQHLQMC------------FETEERARRLLQNVSSLLK-------PGGYFLGITPDS 149 (258)
Q Consensus 97 ~~~~~~~~~fD~V~~~~~l~~~------------~~~~~~~~~~l~~i~~~Lk-------pgG~~i~~~~~~ 149 (258)
... ...+||+|+++-..... ..+......++..+.+.|+ |||.+.+.+|++
T Consensus 296 ~~~--~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g 365 (530)
T 3ufb_A 296 EMG--DKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNG 365 (530)
T ss_dssp GCC--GGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHH
T ss_pred hhc--ccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecch
Confidence 211 24589999997543210 1111223456777777776 799999998875
No 290
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.20 E-value=9.5e-07 Score=72.93 Aligned_cols=110 Identities=22% Similarity=0.177 Sum_probs=66.2
Q ss_pred hcCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCc-eeEEEEc-CCCCCchhhhhhhcCC
Q 025059 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNF-IAEFFEA-DPCAENFETQMQEKAN 104 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~-~~~~~~~-d~~~~~~~~~~~~~~~ 104 (258)
+++|+.+||||||+.|++++..+.. +.+.+.|.++.... .. ........+. -+.|.++ |+.+ + ...
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~--~P~~~~~~Gv~~i~~~~G~Df~~--~------~~~ 138 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HE--EPMLMQSYGWNIVTMKSGVDVFY--K------PSE 138 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SC--CCCCCCSTTGGGEEEECSCCGGG--S------CCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-cc--CCCcccCCCceEEEeeccCCccC--C------CCC
Confidence 6789999999999999999988775 23344555554331 00 0000000111 1245556 8754 2 346
Q ss_pred ceeEEEeccccc---cccCCHHHHHHHHHHHHhcccCCc-EEEEEEcCc
Q 025059 105 QADLVCCFQHLQ---MCFETEERARRLLQNVSSLLKPGG-YFLGITPDS 149 (258)
Q Consensus 105 ~fD~V~~~~~l~---~~~~~~~~~~~~l~~i~~~LkpgG-~~i~~~~~~ 149 (258)
++|+|+|-.+-. ...++...+. ++.-+.+.|+||| .|++=+..+
T Consensus 139 ~~DvVLSDMAPnSG~~~vD~~Rs~~-aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 139 ISDTLLCDIGESSPSAEIEEQRTLR-ILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHH-HHHHHHHHHTTCCSEEEEEESCT
T ss_pred CCCEEEeCCCCCCCccHHHHHHHHH-HHHHHHHHhhcCCcEEEEEECCC
Confidence 899999976543 1111112223 6777779999999 888876665
No 291
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.19 E-value=1.9e-06 Score=72.08 Aligned_cols=81 Identities=11% Similarity=-0.043 Sum_probs=57.1
Q ss_pred CCC--CEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhc-------C-CCceeEEEEcCCCCCchhhhh
Q 025059 30 HPY--VTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ-------R-KNFIAEFFEADPCAENFETQM 99 (258)
Q Consensus 30 ~~~--~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~-------~-~~~~~~~~~~d~~~~~~~~~~ 99 (258)
.++ .+|||++||+|.++..++..+. +|+++|+++.+.+.+++.++.. + ...+++++++|+.+ +.+.
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~--~L~~- 160 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLT--ALTD- 160 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHH--HSTT-
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHH--HHHh-
Confidence 356 8999999999999999988765 8999999998766655543211 0 11268999999743 1111
Q ss_pred hhcCCceeEEEeccccc
Q 025059 100 QEKANQADLVCCFQHLQ 116 (258)
Q Consensus 100 ~~~~~~fD~V~~~~~l~ 116 (258)
...+||+|++.-..+
T Consensus 161 --~~~~fDvV~lDP~y~ 175 (258)
T 2oyr_A 161 --ITPRPQVVYLDPMFP 175 (258)
T ss_dssp --CSSCCSEEEECCCCC
T ss_pred --CcccCCEEEEcCCCC
Confidence 124799998865444
No 292
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.18 E-value=1.9e-05 Score=68.93 Aligned_cols=97 Identities=7% Similarity=-0.090 Sum_probs=66.5
Q ss_pred HhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 27 IYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 27 ~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
..+.+|.+||||||++|+++..+...+. +|++||+.+-. . .+...+ ++.++++|...... +...+
T Consensus 207 ~~l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l~-~----~l~~~~---~V~~~~~d~~~~~~------~~~~~ 271 (375)
T 4auk_A 207 ERLANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPMA-Q----SLMDTG---QVTWLREDGFKFRP------TRSNI 271 (375)
T ss_dssp HHSCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCCC-H----HHHTTT---CEEEECSCTTTCCC------CSSCE
T ss_pred ccCCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhcC-h----hhccCC---CeEEEeCccccccC------CCCCc
Confidence 3466899999999999999999988775 99999987532 1 122222 78999999876544 45789
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i 143 (258)
|+|+|-.+.. .......+.........++.++
T Consensus 272 D~vvsDm~~~-----p~~~~~l~~~wl~~~~~~~aI~ 303 (375)
T 4auk_A 272 SWMVCDMVEK-----PAKVAALMAQWLVNGWCRETIF 303 (375)
T ss_dssp EEEEECCSSC-----HHHHHHHHHHHHHTTSCSEEEE
T ss_pred CEEEEcCCCC-----hHHhHHHHHHHHhccccceEEE
Confidence 9999976432 4444445544444444445433
No 293
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.15 E-value=5.4e-05 Score=63.99 Aligned_cols=106 Identities=12% Similarity=-0.028 Sum_probs=77.1
Q ss_pred CCCEEEEEcCCCCccHHHHHHc------CCCeEEEEecCh--------------------------hHHHHHHHHHHhcC
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA------LIANYIGIDVAT--------------------------SGIGEARDTWENQR 78 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~------~~~~v~gvD~s~--------------------------~~l~~a~~~~~~~~ 78 (258)
....|||+|+..|..+..++.. ...+++++|..+ ..++.++++++..+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 3569999999999988776543 246899999642 14677888888766
Q ss_pred C-CceeEEEEcCCCCCchhhhhhh-cCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 79 K-NFIAEFFEADPCAENFETQMQE-KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 79 ~-~~~~~~~~~d~~~~~~~~~~~~-~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
. ..+++++.+|+.+ .++. +.++||+|.+-... -+.....++.+...|+|||++++.-.
T Consensus 186 l~~~~I~li~Gda~e-----tL~~~~~~~~d~vfIDaD~------y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKD-----TLPTAPIDTLAVLRMDGDL------YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CCSTTEEEEESCHHH-----HSTTCCCCCEEEEEECCCS------HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCcCceEEEEeCHHH-----HHhhCCCCCEEEEEEcCCc------cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 5 2489999999632 1211 35789999776532 23456789999999999999988744
No 294
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.13 E-value=1.6e-05 Score=66.37 Aligned_cols=121 Identities=14% Similarity=0.164 Sum_probs=71.1
Q ss_pred CCCEEEEEcCCCCccHHHHHHc-------CC------CeEEEEecCh---hHHH-----------HHHHHHHhc------
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA-------LI------ANYIGIDVAT---SGIG-----------EARDTWENQ------ 77 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~-------~~------~~v~gvD~s~---~~l~-----------~a~~~~~~~------ 77 (258)
++.+|||+|+|+|..+..+... .+ .+++++|..+ +++. .|++.....
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4579999999999887665432 22 3899999876 4444 444444321
Q ss_pred -------CCCceeEEEEcCCCCCchhhhhhh-cCCceeEEEec-cccccccCCHH-HHHHHHHHHHhcccCCcEEEEEEc
Q 025059 78 -------RKNFIAEFFEADPCAENFETQMQE-KANQADLVCCF-QHLQMCFETEE-RARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 78 -------~~~~~~~~~~~d~~~~~~~~~~~~-~~~~fD~V~~~-~~l~~~~~~~~-~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
....+++++.+|+.+. .+.+.. ....||+|..- ++... +.+ -...++..+.++|+|||+++.-+
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~--l~~~~~~~~~~~D~iflD~fsp~~---~p~lw~~~~l~~l~~~L~pGG~l~tys- 213 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINEL--ISQLDDSLNQKVDAWFLDGFAPAK---NPDMWTQNLFNAMARLARPGGTLATFT- 213 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHH--GGGSCGGGTTCEEEEEECSSCTTT---CGGGCCHHHHHHHHHHEEEEEEEEESC-
T ss_pred hhheeccCCceEEEEEECcHHHH--HhhcccccCCeEEEEEECCCCccc---ChhhcCHHHHHHHHHHcCCCcEEEEEe-
Confidence 1113577888886431 111100 01379999773 22210 111 13578999999999999987433
Q ss_pred CchHHHHHHH
Q 025059 148 DSSTIWAKYQ 157 (258)
Q Consensus 148 ~~~~~~~~~~ 157 (258)
....+.+.+.
T Consensus 214 aa~~vrr~L~ 223 (257)
T 2qy6_A 214 SAGFVRRGLQ 223 (257)
T ss_dssp CBHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 3344444444
No 295
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.05 E-value=1.5e-05 Score=68.02 Aligned_cols=55 Identities=15% Similarity=0.225 Sum_probs=47.1
Q ss_pred HHHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhc
Q 025059 22 TALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ 77 (258)
Q Consensus 22 ~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~ 77 (258)
..+|..+..++..|||++||+|..+..+...+. +++|+|+++.+++.|++++...
T Consensus 226 ~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 226 ERLVRMFSFVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHCCTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHHh
Confidence 345556667899999999999999988877765 9999999999999999998764
No 296
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.91 E-value=8.7e-05 Score=62.37 Aligned_cols=117 Identities=21% Similarity=0.201 Sum_probs=73.7
Q ss_pred hcCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEc-CCCCCchhhhhhhcCCc
Q 025059 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEA-DPCAENFETQMQEKANQ 105 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~ 105 (258)
++.++.+||||||++|+++...+.. +...|+|+|+...-.+.-+ ..+..++. .+.+.+. |+...+ ...
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~ql~w~-lV~~~~~~Dv~~l~--------~~~ 160 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQSYGWN-IVTMKSGVDVFYRP--------SEC 160 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCBTTGG-GEEEECSCCTTSSC--------CCC
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhhcCCc-ceEEEeccCHhhCC--------CCC
Confidence 4568889999999999999977665 5568999999765211000 00011111 3677777 764432 367
Q ss_pred eeEEEeccccccccCCH--H--HHHHHHHHHHhcccCC-cEEEEEEcCc--hHHHHHH
Q 025059 106 ADLVCCFQHLQMCFETE--E--RARRLLQNVSSLLKPG-GYFLGITPDS--STIWAKY 156 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~--~--~~~~~l~~i~~~Lkpg-G~~i~~~~~~--~~~~~~~ 156 (258)
+|+|+|-.+ . +-.+. + ....+|+-+.+.|++| |.|.+-+..+ +.+.+.+
T Consensus 161 ~D~ivcDig-e-Ss~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~l 216 (321)
T 3lkz_A 161 CDTLLCDIG-E-SSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKVIEKM 216 (321)
T ss_dssp CSEEEECCC-C-CCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHHHHHH
T ss_pred CCEEEEECc-c-CCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHHHHHH
Confidence 999998665 2 11221 1 1123677778889998 8888877766 5554433
No 297
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.80 E-value=2.5e-05 Score=63.64 Aligned_cols=116 Identities=21% Similarity=0.165 Sum_probs=73.4
Q ss_pred hcCCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEc-CCCCCchhhhhhhcCCc
Q 025059 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEA-DPCAENFETQMQEKANQ 105 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~ 105 (258)
.+.++.+||||||++|+++...+.. +...|+|+|+-..-.+.-+ ..+..++. .++|.++ |+... +..+
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~-~~~s~gwn-~v~fk~gvDv~~~--------~~~~ 144 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV-PMSTYGWN-IVKLMSGKDVFYL--------PPEK 144 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC-CCCCTTTT-SEEEECSCCGGGC--------CCCC
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc-hhhhcCcC-ceEEEeccceeec--------CCcc
Confidence 3568899999999999999977665 5568999998755431100 00111111 5789888 86332 3467
Q ss_pred eeEEEeccccccccCCH--H--HHHHHHHHHHhcccCCcEEEEEEcCch--HHHHHH
Q 025059 106 ADLVCCFQHLQMCFETE--E--RARRLLQNVSSLLKPGGYFLGITPDSS--TIWAKY 156 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~--~--~~~~~l~~i~~~LkpgG~~i~~~~~~~--~~~~~~ 156 (258)
+|+|+|-.+-.. .+. + ....+|+-+.+.|++ |.|.+-+..+. .+.+.+
T Consensus 145 ~DtllcDIgeSs--~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~p~v~e~l 198 (267)
T 3p8z_A 145 CDTLLCDIGESS--PSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYMPTVIEHL 198 (267)
T ss_dssp CSEEEECCCCCC--SCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCSHHHHHHH
T ss_pred ccEEEEecCCCC--CChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCChhHHHHH
Confidence 999999765421 221 1 112367777899998 77777655543 344433
No 298
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.64 E-value=2.9e-05 Score=83.00 Aligned_cols=104 Identities=22% Similarity=0.263 Sum_probs=57.5
Q ss_pred CCCCEEEEEcCCCCccHHHHHHcC------CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCC-chhhhhhhc
Q 025059 30 HPYVTVCDLYCGAGVDVDKWETAL------IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE-NFETQMQEK 102 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~~~~------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~ 102 (258)
+|..+|||||.|+|..+..+...- ...|+.+|+|+...+.|+++++.. ++.....|..+. ++ .
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~----di~~~~~d~~~~~~~------~ 1308 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL----HVTQGQWDPANPAPG------S 1308 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH----TEEEECCCSSCCCC--------
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc----ccccccccccccccC------C
Confidence 357899999999998877665431 347999999999998888887653 333332343221 22 2
Q ss_pred CCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEc
Q 025059 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~ 147 (258)
...||+|++..++|. ..+....+.+++++|+|||++++..+
T Consensus 1309 ~~~ydlvia~~vl~~----t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1309 LGKADLLVCNCALAT----LGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp ---CCEEEEECC------------------------CCEEEEEEC
T ss_pred CCceeEEEEcccccc----cccHHHHHHHHHHhcCCCcEEEEEec
Confidence 457999999988874 45577899999999999999988643
No 299
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.59 E-value=0.00013 Score=62.75 Aligned_cols=78 Identities=15% Similarity=0.052 Sum_probs=57.8
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHc--CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhc--CC
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK--AN 104 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~ 104 (258)
..|+..++|..||.|+++..++.. +.++|+|+|.++.+++.|+ ++. ..++.+++++..+ +...+... .+
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~----~~Rv~lv~~nF~~--l~~~L~~~g~~~ 127 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID----DPRFSIIHGPFSA--LGEYVAERDLIG 127 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC----CTTEEEEESCGGG--HHHHHHHTTCTT
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc----CCcEEEEeCCHHH--HHHHHHhcCCCC
Confidence 358899999999999999999876 3469999999999999984 552 2378999998754 32223221 13
Q ss_pred ceeEEEecc
Q 025059 105 QADLVCCFQ 113 (258)
Q Consensus 105 ~fD~V~~~~ 113 (258)
++|.|+...
T Consensus 128 ~vDgILfDL 136 (347)
T 3tka_A 128 KIDGILLDL 136 (347)
T ss_dssp CEEEEEEEC
T ss_pred cccEEEECC
Confidence 688887643
No 300
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.54 E-value=0.00022 Score=59.50 Aligned_cols=55 Identities=22% Similarity=0.264 Sum_probs=46.8
Q ss_pred HHHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhc
Q 025059 22 TALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ 77 (258)
Q Consensus 22 ~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~ 77 (258)
..+|..+..++..|||..||+|..+......+. +++|+|+++.+++.|++|++..
T Consensus 203 ~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~~ 257 (260)
T 1g60_A 203 ERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQL 257 (260)
T ss_dssp HHHHHHHCCTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-
T ss_pred HHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhc
Confidence 355666678899999999999998888877665 9999999999999999998754
No 301
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.50 E-value=0.002 Score=55.65 Aligned_cols=130 Identities=13% Similarity=0.121 Sum_probs=87.4
Q ss_pred chHHhHHHHHHHHHHHHh----c--CCCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcC-----
Q 025059 11 LTHHRLYEFAKTALIKIY----S--HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQR----- 78 (258)
Q Consensus 11 ~~~~~~~~~~k~~li~~~----~--~~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~----- 78 (258)
+|...---|++...++.. + ++...|+.||||.......+... +...++-+|. |+.++.-++.+...+
T Consensus 71 ~P~in~g~~~Rt~~iD~~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~ 149 (334)
T 1rjd_A 71 FPVMNYGTYLRTVGIDAAILEFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRIS 149 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhh
Confidence 565544455555544433 2 45678999999998877777654 3336777777 777777766665431
Q ss_pred ---------------CCceeEEEEcCCCCCchh-hhhhh--cCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCc
Q 025059 79 ---------------KNFIAEFFEADPCAENFE-TQMQE--KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGG 140 (258)
Q Consensus 79 ---------------~~~~~~~~~~d~~~~~~~-~~~~~--~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG 140 (258)
...+..++.+|+.+.... ..+.. ......++++-.++.| .+.+....+++.+.+.. |+|
T Consensus 150 l~~~~~~~~~~~~~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~Y--L~~~~~~~ll~~ia~~~-~~~ 226 (334)
T 1rjd_A 150 LGLSKEDTAKSPFLIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCY--MHNNESQLLINTIMSKF-SHG 226 (334)
T ss_dssp HTCCSSCCCCTTEEEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGG--SCHHHHHHHHHHHHHHC-SSE
T ss_pred cccccccccccccccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhC--CCHHHHHHHHHHHHhhC-CCc
Confidence 013678999999874321 11111 2356788999999998 56888999999999987 677
Q ss_pred EEEE
Q 025059 141 YFLG 144 (258)
Q Consensus 141 ~~i~ 144 (258)
.+++
T Consensus 227 ~~v~ 230 (334)
T 1rjd_A 227 LWIS 230 (334)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6653
No 302
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.48 E-value=0.018 Score=49.12 Aligned_cols=174 Identities=8% Similarity=-0.041 Sum_probs=107.7
Q ss_pred CEEEEEcCCCCccHHHHHHc-C-CCeEEEEecChhHHHHHHHHHHhcC--CCceeEEEEcCCCCCchhhhhhhc---CCc
Q 025059 33 VTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQR--KNFIAEFFEADPCAENFETQMQEK---ANQ 105 (258)
Q Consensus 33 ~~VLDlGcG~G~~~~~~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~---~~~ 105 (258)
..|++||||-=. ..+.-. + ...++-+| -|..++..++.+...+ ...+..++.+|+.+ .+...+... ...
T Consensus 104 ~QvV~LGaGlDT--ra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~ 179 (310)
T 2uyo_A 104 RQFVILASGLDS--RAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSA 179 (310)
T ss_dssp CEEEEETCTTCC--HHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTS
T ss_pred CeEEEeCCCCCc--hhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCC
Confidence 569999998754 333222 2 24889999 5899998888886421 12378899999987 443333211 235
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCch--HHHHHHHHhH-HhhhcCCCCCCCCCCCCcccCe
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS--TIWAKYQKNV-EAYHNRSSSMKPNLVPNCIRSE 182 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~ 182 (258)
.-++++-.+++| .+.+....+++.+...+.||+.+++...... .-.......+ ..+-..+ .
T Consensus 180 Pt~~i~Egvl~Y--l~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~~~~~~~~~~~~~~~~~~g---------~----- 243 (310)
T 2uyo_A 180 RTAWLAEGLLMY--LPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEWREQMQLRFRRVSDALG---------F----- 243 (310)
T ss_dssp CEEEEECSCGGG--SCHHHHHHHHHHHHHTCCTTCEEEEECCCTTCSHHHHHHHHHHHHHHC------------------
T ss_pred CEEEEEechHhh--CCHHHHHHHHHHHHHhCCCCeEEEEEecCCCCcchhHHHHHHHHHHHHHcC---------C-----
Confidence 567788888887 4567889999999999999999999854432 1111111111 1110000 0
Q ss_pred eEEEEecccCCCCCCceeceEEEEccCccCCCccccc-hHHHHHHHHHcCcEEEEeCChhHHHHhccCC
Q 025059 183 SYVITFEVEEEKFPLFGKKYQLKFANDISAETQCLVH-FPSLIRLAREAGLEYVEIQNLNEFYDDNRHA 250 (258)
Q Consensus 183 ~~~i~f~~~~~~~~~~g~~y~~~l~~~~~~~~e~lv~-~~~l~~~~~~~Gf~~~~~~~f~~~~~~~~~~ 250 (258)
.++ ..+.. . .+..+ .++..+.+.++||+.+ ..+..+++..|...
T Consensus 244 ----~~~--------------~~l~~-~----~~~~~~~~~~~~~f~~~G~~~~-~~~~~e~~~~yg~~ 288 (310)
T 2uyo_A 244 ----EQA--------------VDVQE-L----IYHDENRAVVADWLNRHGWRAT-AQSAPDEMRRVGRW 288 (310)
T ss_dssp -------------------------C-C----TTCCTTCCCHHHHHTTTTEEEE-EEEHHHHHHHTTCC
T ss_pred ----cCC--------------CCccc-c----ccCCCChHHHHHHHHHCcCccc-cCCHHHHHHHcCCC
Confidence 000 00000 0 01124 6788899999999999 77889999888664
No 303
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.11 E-value=0.00051 Score=57.78 Aligned_cols=99 Identities=15% Similarity=-0.011 Sum_probs=63.9
Q ss_pred CCCEEEEEcC------CCCccHHHHHHcCC-CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcC
Q 025059 31 PYVTVCDLYC------GAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGc------G~G~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 103 (258)
-+.+|||+|+ ..|.....-. .+. +.++++|+.+-.. . .-.++++|+.... ..
T Consensus 109 ~gmrVLDLGA~s~kg~APGS~VLr~~-~p~g~~VVavDL~~~~s---------d----a~~~IqGD~~~~~-------~~ 167 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGTAVLRQW-LPTGTLLVDSDLNDFVS---------D----ADSTLIGDCATVH-------TA 167 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHHHHH-SCTTCEEEEEESSCCBC---------S----SSEEEESCGGGEE-------ES
T ss_pred CCCEEEeCCCCCCCCCCCcHHHHHHh-CCCCcEEEEeeCccccc---------C----CCeEEEccccccc-------cC
Confidence 5799999996 5666322211 222 3899999976431 1 1145999974422 35
Q ss_pred CceeEEEeccccccc-------cCCHHHHHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 104 NQADLVCCFQHLQMC-------FETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~-------~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
++||+|++-.+-.-. .....-.+.++.-+.+.|+|||.|++=+..+.
T Consensus 168 ~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGs 221 (344)
T 3r24_A 168 NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS 221 (344)
T ss_dssp SCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS
T ss_pred CCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCC
Confidence 889999986533210 01122467788888999999999999876664
No 304
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.71 E-value=0.0048 Score=53.65 Aligned_cols=58 Identities=17% Similarity=0.186 Sum_probs=49.1
Q ss_pred CCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCC
Q 025059 32 YVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE 93 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~ 93 (258)
+..|||||.|.|.++..++.. ...+++++++++..+...++.. .. .+++++++|+...
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~~---~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-EG---SPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-TT---SSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-cC---CCEEEEECCccch
Confidence 589999999999999999875 4458999999999999888876 22 2789999999653
No 305
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.58 E-value=0.0036 Score=55.00 Aligned_cols=76 Identities=14% Similarity=0.058 Sum_probs=57.1
Q ss_pred CEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhh--hcCCceeEEE
Q 025059 33 VTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ--EKANQADLVC 110 (258)
Q Consensus 33 ~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~fD~V~ 110 (258)
.+||||.||.|++...+...+...+.++|+++.+++..+.++. ...++++|+.+........ .....+|+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~------~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ 76 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP------RSLHVQEDVSLLNAEIIKGFFKNDMPIDGII 76 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT------TSEEECCCGGGCCHHHHHHHHCSCCCCCEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC------CCceEecChhhcCHHHHHhhcccCCCeeEEE
Confidence 6899999999999999988888778899999999887776654 3467889987654322110 0246899998
Q ss_pred eccc
Q 025059 111 CFQH 114 (258)
Q Consensus 111 ~~~~ 114 (258)
...-
T Consensus 77 ggpP 80 (376)
T 3g7u_A 77 GGPP 80 (376)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 7654
No 306
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.39 E-value=0.0019 Score=56.02 Aligned_cols=74 Identities=15% Similarity=0.145 Sum_probs=55.5
Q ss_pred CCEEEEEcCCCCccHHHHHHcC--CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 32 YVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
..+||||.||.|++...+...+ ...+.++|+++.+++..+.++.. ..++++|+.+.... .+ +...+|+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~------~~~~~~Di~~~~~~-~~--~~~~~D~l 72 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH------TQLLAKTIEGITLE-EF--DRLSFDMI 72 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECSCGGGCCHH-HH--HHHCCSEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc------cccccCCHHHccHh-Hc--CcCCcCEE
Confidence 3689999999999999998887 44799999999999988887653 34678888664321 11 11268999
Q ss_pred Eeccc
Q 025059 110 CCFQH 114 (258)
Q Consensus 110 ~~~~~ 114 (258)
+...-
T Consensus 73 ~~gpP 77 (343)
T 1g55_A 73 LMSPP 77 (343)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 88764
No 307
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.26 E-value=0.0088 Score=51.49 Aligned_cols=69 Identities=14% Similarity=0.057 Sum_probs=52.9
Q ss_pred CCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEEe
Q 025059 32 YVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~ 111 (258)
+.+||||.||.|++...+...+...+.++|+++.+++..+.++... . ++|+.+.... .-..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~----~----~~Di~~~~~~-----~~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK----P----EGDITQVNEK-----TIPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC----C----BSCGGGSCGG-----GSCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC----C----cCCHHHcCHh-----hCCCCCEEEE
Confidence 5799999999999999998888878999999999998888776432 1 5777553321 1235899987
Q ss_pred cc
Q 025059 112 FQ 113 (258)
Q Consensus 112 ~~ 113 (258)
..
T Consensus 78 gp 79 (327)
T 2c7p_A 78 GF 79 (327)
T ss_dssp EC
T ss_pred CC
Confidence 64
No 308
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.17 E-value=0.0088 Score=51.33 Aligned_cols=55 Identities=13% Similarity=0.204 Sum_probs=46.4
Q ss_pred HHHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhc
Q 025059 22 TALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ 77 (258)
Q Consensus 22 ~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~ 77 (258)
..+|..+..++..|||.-||+|..+......+. +.+|+|+++..++.+++|+...
T Consensus 243 ~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 243 EFFIRMLTEPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp HHHHHHHCCTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSCS
T ss_pred HHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHhc
Confidence 345666677999999999999998888777665 9999999999999999998644
No 309
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.03 E-value=0.012 Score=50.36 Aligned_cols=55 Identities=25% Similarity=0.270 Sum_probs=45.3
Q ss_pred HHHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecCh---hHHHHHHHHHHhc
Q 025059 22 TALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVAT---SGIGEARDTWENQ 77 (258)
Q Consensus 22 ~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~---~~l~~a~~~~~~~ 77 (258)
..+|..+..++..|||.-||+|..+......+. +.+|+|+++ ..++.+++|+...
T Consensus 233 ~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 233 ERLVRALSHPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp HHHHHHHSCTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC---
T ss_pred HHHHHHhCCCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHHc
Confidence 355667778999999999999998888877765 999999999 9999999998643
No 310
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.88 E-value=0.032 Score=48.53 Aligned_cols=98 Identities=12% Similarity=0.074 Sum_probs=63.6
Q ss_pred cCCCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh-cCCc
Q 025059 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (258)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~ 105 (258)
.+++.+||-+|+|. |..+.++++. +...|+++|.+++.++.+++.-. . ..+.. .+..+.+.+.. ..+.
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa------~-~vi~~--~~~~~~~~~~~~~~gg 258 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA------T-HVINS--KTQDPVAAIKEITDGG 258 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC------S-EEEET--TTSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC------C-EEecC--CccCHHHHHHHhcCCC
Confidence 45889999999886 6666777665 55479999999998888864311 1 12222 22223222211 2337
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+|+|+..-.. ...+....++|++||.++..
T Consensus 259 ~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 259 VNFALESTGS----------PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EEEEEECSCC----------HHHHHHHHHTEEEEEEEEEC
T ss_pred CcEEEECCCC----------HHHHHHHHHHHhcCCEEEEe
Confidence 9999764421 24567788999999999876
No 311
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=95.79 E-value=0.81 Score=39.26 Aligned_cols=190 Identities=13% Similarity=0.093 Sum_probs=110.7
Q ss_pred CcchHHhHHHHHHHHHHHHhc-------CCCCEEEEEcCCCCccHHHHHHcC--CCeEEEEecChhHHHHHHHHHHhcC-
Q 025059 9 SELTHHRLYEFAKTALIKIYS-------HPYVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQR- 78 (258)
Q Consensus 9 ~~~~~~~~~~~~k~~li~~~~-------~~~~~VLDlGcG~G~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~- 78 (258)
+++|...---|++...++..+ ++...|+-||||-=.....+...+ ...++=+|. |+.++.=++.+...+
T Consensus 61 rr~P~inrG~~~Rt~~iD~~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~ 139 (334)
T 3iei_A 61 RKAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPP 139 (334)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchh
Confidence 677776655666665555443 245789999999855444443331 236777776 444443333333200
Q ss_pred ---------------------CCceeEEEEcCCCCCc-hhhhhhh---cCCceeEEEeccccccccCCHHHHHHHHHHHH
Q 025059 79 ---------------------KNFIAEFFEADPCAEN-FETQMQE---KANQADLVCCFQHLQMCFETEERARRLLQNVS 133 (258)
Q Consensus 79 ---------------------~~~~~~~~~~d~~~~~-~~~~~~~---~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~ 133 (258)
...+..++.+|+.+.. +...+.. .....-++++-.++.| .+.+....+++.+.
T Consensus 140 l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~Y--L~~~~~~~ll~~ia 217 (334)
T 3iei_A 140 LSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVY--MTPEQSANLLKWAA 217 (334)
T ss_dssp HHHHHHHHSSSSSCBCCTTEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGG--SCHHHHHHHHHHHH
T ss_pred hhhhhcccccccccccccccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhC--CCHHHHHHHHHHHH
Confidence 0226788999987642 2222211 2345667888888887 56888999999999
Q ss_pred hcccCCcEEEEEEcCc-hHHHHHHHHhHHhhhcCCCCCCCCCCCCcccCeeEEEEecccCCCCCCceeceEEEEccCccC
Q 025059 134 SLLKPGGYFLGITPDS-STIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITFEVEEEKFPLFGKKYQLKFANDISA 212 (258)
Q Consensus 134 ~~LkpgG~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~f~~~~~~~~~~g~~y~~~l~~~~~~ 212 (258)
+...+|..++....+. +...+.+.++.. ..+ .|..| .
T Consensus 218 ~~f~~~~~i~yE~i~p~d~fg~~M~~~l~---~~g---------------------------~pl~s----------l-- 255 (334)
T 3iei_A 218 NSFERAMFINYEQVNMGDRFGQIMIENLR---RRQ---------------------------CDLAG----------V-- 255 (334)
T ss_dssp HHCSSEEEEEEEECCTTSHHHHHHHHHHH---TTT---------------------------CCCTT----------G--
T ss_pred HhCCCceEEEEeccCCCCHHHHHHHHHHH---HhC---------------------------CCCcc----------c--
Confidence 8876554444433332 222233332221 111 01111 1
Q ss_pred CCccccchHHHHHHHHHcCcEEEEeCChhHHHH
Q 025059 213 ETQCLVHFPSLIRLAREAGLEYVEIQNLNEFYD 245 (258)
Q Consensus 213 ~~e~lv~~~~l~~~~~~~Gf~~~~~~~f~~~~~ 245 (258)
....+++...+.+.++||+.+...+..++|+
T Consensus 256 --~~y~t~~~~~~r~~~~Gw~~~~~~d~~~~~~ 286 (334)
T 3iei_A 256 --ETCKSLESQKERLLSNGWETASAVDMMELYN 286 (334)
T ss_dssp --GGGGCHHHHHHHHHTTTCSEEEEEEHHHHHH
T ss_pred --ccCCCHHHHHHHHHHcCCCcceeecHHHHHH
Confidence 0134667778888999999999999999984
No 312
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.79 E-value=0.0029 Score=53.13 Aligned_cols=107 Identities=7% Similarity=-0.059 Sum_probs=75.1
Q ss_pred CCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEEe
Q 025059 32 YVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~ 111 (258)
+..+||+=+|+|..+..+.+.+ .+++.+|.++..++..++++... .++.++..|... ....+..+..+||+|.+
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~~-d~~vfvE~~~~a~~~L~~Nl~~~---~~~~V~~~D~~~--~L~~l~~~~~~fdLVfi 165 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRSQ-DRLYLCELHPTEYNFLLKLPHFN---KKVYVNHTDGVS--KLNALLPPPEKRGLIFI 165 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCTT-SEEEEECCSHHHHHHHTTSCCTT---SCEEEECSCHHH--HHHHHCSCTTSCEEEEE
T ss_pred CCCceeEeCCcHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHhCcC---CcEEEEeCcHHH--HHHHhcCCCCCccEEEE
Confidence 4668999999999999988844 79999999999999888877552 268889888632 11112123457999977
Q ss_pred ccccccccCCHHHHHHHHHHHHh--cccCCcEEEEEEcC
Q 025059 112 FQHLQMCFETEERARRLLQNVSS--LLKPGGYFLGITPD 148 (258)
Q Consensus 112 ~~~l~~~~~~~~~~~~~l~~i~~--~LkpgG~~i~~~~~ 148 (258)
-- .| +.......+++.+.+ .+.|+|++++..|-
T Consensus 166 DP--PY--e~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi 200 (283)
T 2oo3_A 166 DP--SY--ERKEEYKEIPYAIKNAYSKFSTGLYCVWYPV 200 (283)
T ss_dssp CC--CC--CSTTHHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CC--CC--CCCcHHHHHHHHHHHhCccCCCeEEEEEEec
Confidence 43 22 212345566665555 56799999998654
No 313
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.75 E-value=0.023 Score=48.57 Aligned_cols=100 Identities=14% Similarity=0.014 Sum_probs=66.1
Q ss_pred CEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEEec
Q 025059 33 VTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCCF 112 (258)
Q Consensus 33 ~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~ 112 (258)
++||||-||-|++...+...++.-+.++|+++.+.+.-+.++ ...++++|+.+.... .-...|+++..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~-------~~~~~~~DI~~i~~~-----~~~~~D~l~gg 68 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNH-------SAKLIKGDISKISSD-----EFPKCDGIIGG 68 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHC-------CSEEEESCGGGCCGG-----GSCCCSEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHC-------CCCcccCChhhCCHh-----hCCcccEEEec
Confidence 479999999999999998888877889999999888766654 235788998765432 22468998775
Q ss_pred ccccc--------ccCCH-HHHHHHHHHHHhcccCCcEEEEE
Q 025059 113 QHLQM--------CFETE-ERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 113 ~~l~~--------~~~~~-~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+-... -+.+. ..+-.-+-.+.+.++|.- |++.
T Consensus 69 pPCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk~-~~~E 109 (331)
T 3ubt_Y 69 PPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPIF-FLAE 109 (331)
T ss_dssp CCGGGTEETTEECCTTCGGGHHHHHHHHHHHHHCCSE-EEEE
T ss_pred CCCCCcCCCCCccCCCCchhHHHHHHHHHHhccCCeE-EEee
Confidence 53221 01122 123333334566678974 4444
No 314
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.71 E-value=0.026 Score=47.79 Aligned_cols=75 Identities=17% Similarity=0.105 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCe--EEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIAN--YIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~--v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
...+|+||-||.|++...+...+... +.++|+++.+++.-+.++. ...+..+|+.+..... ++ ..+.+|+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~------~~~~~~~DI~~i~~~~-i~-~~~~~Dl 86 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ------GKIMYVGDVRSVTQKH-IQ-EWGPFDL 86 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT------TCEEEECCGGGCCHHH-HH-HTCCCSE
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC------CCceeCCChHHccHHH-hc-ccCCcCE
Confidence 45789999999999999998888755 6999999998877665543 2357789987654321 21 1257999
Q ss_pred EEecc
Q 025059 109 VCCFQ 113 (258)
Q Consensus 109 V~~~~ 113 (258)
++..+
T Consensus 87 l~ggp 91 (295)
T 2qrv_A 87 VIGGS 91 (295)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 98765
No 315
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.60 E-value=0.13 Score=42.49 Aligned_cols=117 Identities=12% Similarity=0.082 Sum_probs=71.3
Q ss_pred HHHHhcCCCCEEEEEcCCCCccHHHHHHc--------CCCeEEEEe-----cChh----------------------HHH
Q 025059 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETA--------LIANYIGID-----VATS----------------------GIG 68 (258)
Q Consensus 24 li~~~~~~~~~VLDlGcG~G~~~~~~~~~--------~~~~v~gvD-----~s~~----------------------~l~ 68 (258)
|.+....-...|+|+||-.|+.+..++.. ...+++++| +.+. .+.
T Consensus 62 l~~~i~~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~ 141 (257)
T 3tos_A 62 LYRQVLDVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLK 141 (257)
T ss_dssp HHHHTTTSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHH
T ss_pred HHHHhhCCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHH
Confidence 33443444468999999999988776542 236899999 3221 112
Q ss_pred HHHHHH---HhcCC-CceeEEEEcCCCCCchhhhhh-hcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEE
Q 025059 69 EARDTW---ENQRK-NFIAEFFEADPCAENFETQMQ-EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (258)
Q Consensus 69 ~a~~~~---~~~~~-~~~~~~~~~d~~~~~~~~~~~-~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i 143 (258)
...+.. ...+. ..++.++.+++.+. +...+. .+..++|+|.+-... -+.....++.+...|+|||+++
T Consensus 142 ~~l~~~~~~~~~g~~~~~i~li~G~~~dT-L~~~l~~~~~~~~dlv~ID~D~------Y~~t~~~le~~~p~l~~GGvIv 214 (257)
T 3tos_A 142 EVLDAHECSDFFGHVTQRSVLVEGDVRET-VPRYLAENPQTVIALAYFDLDL------YEPTKAVLEAIRPYLTKGSIVA 214 (257)
T ss_dssp HHHHHHHTTSTTTTSCCSEEEEESCHHHH-HHHHHHHCTTCCEEEEEECCCC------HHHHHHHHHHHGGGEEEEEEEE
T ss_pred HHHHHHhhhhhcCCCCCcEEEEEecHHHH-HHHHHHhCCCCceEEEEEcCcc------cchHHHHHHHHHHHhCCCcEEE
Confidence 111111 11121 24799999996331 111111 134579999776532 3456678899999999999999
Q ss_pred EEEc
Q 025059 144 GITP 147 (258)
Q Consensus 144 ~~~~ 147 (258)
+.-.
T Consensus 215 ~DD~ 218 (257)
T 3tos_A 215 FDEL 218 (257)
T ss_dssp ESST
T ss_pred EcCC
Confidence 8854
No 316
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.49 E-value=0.025 Score=48.66 Aligned_cols=76 Identities=12% Similarity=0.110 Sum_probs=55.9
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCC--CeE-EEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALI--ANY-IGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~--~~v-~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
...+|+|+.||.|++...+...+. ..+ .++|+++.+.+.-+.++... ++++|+.+..... + +...+|
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-------~~~~DI~~~~~~~-i--~~~~~D 78 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-------VQVKNLDSISIKQ-I--ESLNCN 78 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-------CBCCCTTTCCHHH-H--HHTCCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-------cccCChhhcCHHH-h--ccCCCC
Confidence 356899999999999999988874 456 79999999988877776421 5678887755422 2 223689
Q ss_pred EEEeccccc
Q 025059 108 LVCCFQHLQ 116 (258)
Q Consensus 108 ~V~~~~~l~ 116 (258)
+++......
T Consensus 79 il~ggpPCQ 87 (327)
T 3qv2_A 79 TWFMSPPCQ 87 (327)
T ss_dssp EEEECCCCT
T ss_pred EEEecCCcc
Confidence 998765433
No 317
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.35 E-value=0.017 Score=49.88 Aligned_cols=72 Identities=13% Similarity=0.192 Sum_probs=53.2
Q ss_pred CEEEEEcCCCCccHHHHHHcCC--CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 33 VTVCDLYCGAGVDVDKWETALI--ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 33 ~~VLDlGcG~G~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
.+|+|+.||.|++...+...+. ..+.++|+++.+.+.-+.++.. ..+.+.|+.+..... + +...+|+++
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~------~~~~~~DI~~~~~~~-~--~~~~~D~l~ 74 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE------TNLLNRNIQQLTPQV-I--KKWNVDTIL 74 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECCCGGGCCHHH-H--HHTTCCEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC------CceeccccccCCHHH-h--ccCCCCEEE
Confidence 5899999999999999987775 4688999999998877766643 346778886654322 2 223689998
Q ss_pred ecc
Q 025059 111 CFQ 113 (258)
Q Consensus 111 ~~~ 113 (258)
..+
T Consensus 75 ggp 77 (333)
T 4h0n_A 75 MSP 77 (333)
T ss_dssp ECC
T ss_pred ecC
Confidence 654
No 318
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.22 E-value=0.051 Score=46.56 Aligned_cols=99 Identities=13% Similarity=0.063 Sum_probs=64.0
Q ss_pred hcCCCCEEEEEcCCC-CccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 28 YSHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~-G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
-..++.+||-.|+|. |..+.++++....+++++|.+++.++.+++.-. . ..+ |..+..+.+.+....+.+
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa------~-~~i--~~~~~~~~~~~~~~~g~~ 233 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGA------E-VAV--NARDTDPAAWLQKEIGGA 233 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC------S-EEE--ETTTSCHHHHHHHHHSSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCC------C-EEE--eCCCcCHHHHHHHhCCCC
Confidence 345889999999976 777777777644499999999998887765311 1 122 222223332222223478
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|+|+.... ....+..+.++|++||.++..
T Consensus 234 d~vid~~g----------~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 234 HGVLVTAV----------SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp EEEEESSC----------CHHHHHHHHHHEEEEEEEEEC
T ss_pred CEEEEeCC----------CHHHHHHHHHHhccCCEEEEe
Confidence 99865432 124567778899999999876
No 319
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.19 E-value=0.17 Score=37.27 Aligned_cols=100 Identities=10% Similarity=0.002 Sum_probs=61.7
Q ss_pred CEEEEEcCCC-CccHHHHHH-cCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 33 VTVCDLYCGA-GVDVDKWET-ALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 33 ~~VLDlGcG~-G~~~~~~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
.+|+=+|||. |..+...+. .+. .++++|.+++.++.+++ . .+..+.+|..+....... .-..+|+|+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~----~----g~~~i~gd~~~~~~l~~a--~i~~ad~vi 76 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRE----R----GVRAVLGNAANEEIMQLA--HLECAKWLI 76 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH----T----TCEEEESCTTSHHHHHHT--TGGGCSEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHH----c----CCCEEECCCCCHHHHHhc--CcccCCEEE
Confidence 5788899986 433333333 355 89999999998877654 2 456788998765432221 235789887
Q ss_pred eccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
+.. .+.... ..+....+.+.|+..++....+..
T Consensus 77 ~~~------~~~~~n-~~~~~~a~~~~~~~~iiar~~~~~ 109 (140)
T 3fwz_A 77 LTI------PNGYEA-GEIVASARAKNPDIEIIARAHYDD 109 (140)
T ss_dssp ECC------SCHHHH-HHHHHHHHHHCSSSEEEEEESSHH
T ss_pred EEC------CChHHH-HHHHHHHHHHCCCCeEEEEECCHH
Confidence 643 223222 223345666788888776655543
No 320
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.58 E-value=0.062 Score=47.19 Aligned_cols=106 Identities=15% Similarity=0.006 Sum_probs=63.9
Q ss_pred cCCCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCch-hhhhhh--cC
Q 025059 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF-ETQMQE--KA 103 (258)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~--~~ 103 (258)
..++.+||-+|||. |..+..+++. +..+|+++|.+++.++.+++. .++.+ |..+..+ .+.+.. ..
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l--------Ga~~i--~~~~~~~~~~~~~~~~~g 252 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA--------GFETI--DLRNSAPLRDQIDQILGK 252 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT--------TCEEE--ETTSSSCHHHHHHHHHSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc--------CCcEE--cCCCcchHHHHHHHHhCC
Confidence 45899999999976 7777777765 555899999999888777532 22333 2222222 222211 22
Q ss_pred CceeEEEeccccccccCC-H----HHHHHHHHHHHhcccCCcEEEEE
Q 025059 104 NQADLVCCFQHLQMCFET-E----ERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~-~----~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
..+|+|+..-.-... .. . ......+..+.++|++||.+++.
T Consensus 253 ~g~Dvvid~~g~~~~-~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 253 PEVDCGVDAVGFEAH-GLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp SCEEEEEECSCTTCB-CSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CCCCEEEECCCCccc-cccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 369999765432110 00 0 00113577788899999998765
No 321
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.42 E-value=0.21 Score=43.09 Aligned_cols=103 Identities=13% Similarity=0.002 Sum_probs=64.7
Q ss_pred hcCCCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cC
Q 025059 28 YSHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KA 103 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~ 103 (258)
-..++.+||=+|+|. |..+.++++. +...++++|.+++.++.+++. ... -+.+...+.....+...+.. ..
T Consensus 176 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~----~~~~~~~~~~~~~~~~~v~~~t~g 250 (363)
T 3m6i_A 176 GVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPE----VVTHKVERLSAEESAKKIVESFGG 250 (363)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTT----CEEEECCSCCHHHHHHHHHHHTSS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chh----cccccccccchHHHHHHHHHHhCC
Confidence 356899999999875 6666777665 454599999999999988765 222 12222111111122222211 24
Q ss_pred CceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
..+|+|+..-+- ...+....++|++||.++..
T Consensus 251 ~g~Dvvid~~g~----------~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 251 IEPAVALECTGV----------ESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp CCCSEEEECSCC----------HHHHHHHHHHSCTTCEEEEC
T ss_pred CCCCEEEECCCC----------hHHHHHHHHHhcCCCEEEEE
Confidence 579999764421 23567778899999999876
No 322
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.11 E-value=0.13 Score=45.53 Aligned_cols=61 Identities=5% Similarity=-0.056 Sum_probs=47.3
Q ss_pred CCCCEEEEEcCCCCccHHHHH-Hc-C-CCeEEEEecChhHHHHHHHHHHh--cCCC-ceeEEEEcCC
Q 025059 30 HPYVTVCDLYCGAGVDVDKWE-TA-L-IANYIGIDVATSGIGEARDTWEN--QRKN-FIAEFFEADP 90 (258)
Q Consensus 30 ~~~~~VLDlGcG~G~~~~~~~-~~-~-~~~v~gvD~s~~~l~~a~~~~~~--~~~~-~~~~~~~~d~ 90 (258)
+++..|+|+|++.|..+..++ .. + .++|+++++++...+..+++... ++.. .++.+++.-+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 478899999999999988877 33 3 36999999999999999988876 2111 3677766554
No 323
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.07 E-value=0.065 Score=41.97 Aligned_cols=96 Identities=15% Similarity=0.086 Sum_probs=58.5
Q ss_pred cCCCCEEEEEcCC--CCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cC
Q 025059 29 SHPYVTVCDLYCG--AGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KA 103 (258)
Q Consensus 29 ~~~~~~VLDlGcG--~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~ 103 (258)
.+++.+||..|++ -|..+..++.. +. +++++|.+++.++.+++ .+. . .. .|..+....+.+.. ..
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g~--~-~~--~d~~~~~~~~~~~~~~~~ 105 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSR----LGV--E-YV--GDSRSVDFADEILELTDG 105 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHT----TCC--S-EE--EETTCSTHHHHHHHHTTT
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cCC--C-EE--eeCCcHHHHHHHHHHhCC
Confidence 4578999999953 35445555444 54 89999999887766543 111 1 11 24333333222211 12
Q ss_pred CceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
..+|+|+...+ ...+..+.++|+|||.++..
T Consensus 106 ~~~D~vi~~~g-----------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 106 YGVDVVLNSLA-----------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp CCEEEEEECCC-----------THHHHHHHHTEEEEEEEEEC
T ss_pred CCCeEEEECCc-----------hHHHHHHHHHhccCCEEEEE
Confidence 46999986542 13567788999999998875
No 324
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.76 E-value=0.19 Score=43.28 Aligned_cols=101 Identities=10% Similarity=0.029 Sum_probs=62.0
Q ss_pred hcCCCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCC-Cchhhhhhh-cC
Q 025059 28 YSHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQE-KA 103 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~-~~ 103 (258)
-..++.+||-+|+|. |..+.++++. +..+++++|.+++.++.+++.-. . ..+..+-.+ ..+...+.. ..
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa------~-~vi~~~~~~~~~~~~~i~~~~~ 240 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA------D-LVLQISKESPQEIARKVEGQLG 240 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC------S-EEEECSSCCHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC------C-EEEcCcccccchHHHHHHHHhC
Confidence 356899999999875 6666777665 44489999999988887764211 1 222211000 112111111 12
Q ss_pred CceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
..+|+|+..-+ . ...+....++|++||.++..
T Consensus 241 ~g~D~vid~~g------~----~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 241 CKPEVTIECTG------A----EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp SCCSEEEECSC------C----HHHHHHHHHHSCTTCEEEEC
T ss_pred CCCCEEEECCC------C----hHHHHHHHHHhcCCCEEEEE
Confidence 57999976432 1 13466777899999999876
No 325
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.74 E-value=0.19 Score=42.76 Aligned_cols=97 Identities=14% Similarity=-0.010 Sum_probs=60.3
Q ss_pred cCCCCEEEEEcCC--CCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCC-Cchhhhhhh-cCC
Q 025059 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQE-KAN 104 (258)
Q Consensus 29 ~~~~~~VLDlGcG--~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~-~~~ 104 (258)
..++.+||-.|++ -|..+..++.....+++++|.+++.++.++ .+ +. .. ..|..+ ..+...+.. ..+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~~---g~--~~---~~d~~~~~~~~~~~~~~~~~ 213 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QI---GF--DA---AFNYKTVNSLEEALKKASPD 213 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT---TC--SE---EEETTSCSCHHHHHHHHCTT
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CC--cE---EEecCCHHHHHHHHHHHhCC
Confidence 4578999999983 455555555543349999999988887773 22 11 11 124333 233222211 225
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+|+|+...+ . ..+....++|++||.++..
T Consensus 214 ~~d~vi~~~g-------~----~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 214 GYDCYFDNVG-------G----EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp CEEEEEESSC-------H----HHHHHHHTTEEEEEEEEEC
T ss_pred CCeEEEECCC-------h----HHHHHHHHHHhcCCEEEEE
Confidence 7999976553 1 2367788999999999865
No 326
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.73 E-value=0.26 Score=42.08 Aligned_cols=99 Identities=16% Similarity=0.170 Sum_probs=62.0
Q ss_pred hcCCCCEEEEEcCCC-CccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 28 YSHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~-G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
-..++.+||-+|+|. |..+.++++....+++++|.+++.++.+++ + +. . .. .|..+..+...+....+.+
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga--~-~~--~d~~~~~~~~~~~~~~~~~ 231 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-L---GA--D-LV--VNPLKEDAAKFMKEKVGGV 231 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-T---TC--S-EE--ECTTTSCHHHHHHHHHSSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-C---CC--C-EE--ecCCCccHHHHHHHHhCCC
Confidence 456889999999964 555555655533499999999988887753 2 11 1 11 2433333322221111579
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|+|+...+. ...+....++|+++|.++..
T Consensus 232 d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 232 HAAVVTAVS----------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp EEEEESSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCC----------HHHHHHHHHHhhcCCEEEEe
Confidence 999765421 13567778899999998865
No 327
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.71 E-value=0.19 Score=43.24 Aligned_cols=98 Identities=12% Similarity=0.060 Sum_probs=62.8
Q ss_pred cCCCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 025059 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (258)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (258)
.+++.+||=+|+|. |..+.++++. +..+|+++|.+++.++.+++.-. . ..+ |..+..+.+.+.. ...
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa------~-~vi--~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA------T-DII--NYKNGDIVEQILKATDGK 234 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTC------C-EEE--CGGGSCHHHHHHHHTTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC------c-eEE--cCCCcCHHHHHHHHcCCC
Confidence 45899999999875 6666777666 44489999999988887765421 1 122 2112223222211 234
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+|+|+....- ...+....++|+|||.++..
T Consensus 235 g~D~v~d~~g~----------~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 235 GVDKVVIAGGD----------VHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp CEEEEEECSSC----------TTHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCCC----------hHHHHHHHHHHhcCCEEEEe
Confidence 69999764421 13567778899999999865
No 328
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.57 E-value=0.21 Score=43.15 Aligned_cols=97 Identities=13% Similarity=-0.063 Sum_probs=62.0
Q ss_pred cCCCCEEEEEcCCC-CccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cCCc
Q 025059 29 SHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KANQ 105 (258)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~ 105 (258)
.+++.+||=+|+|. |..+..+++....+++++|.+++.++.+++.-. . ..+..+ ...+.+.+.. ....
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa------~-~vi~~~--~~~~~~~v~~~~~g~g 257 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGA------D-HGINRL--EEDWVERVYALTGDRG 257 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC------S-EEEETT--TSCHHHHHHHHHTTCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCC------C-EEEcCC--cccHHHHHHHHhCCCC
Confidence 45889999999875 666666666544499999999988888765311 1 222221 1222222211 2347
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+|+|+...+- ..+....++|++||.++..
T Consensus 258 ~D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 258 ADHILEIAGG-----------AGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp EEEEEEETTS-----------SCHHHHHHHEEEEEEEEEE
T ss_pred ceEEEECCCh-----------HHHHHHHHHhhcCCEEEEE
Confidence 9999765431 2356677899999999876
No 329
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.53 E-value=0.16 Score=43.62 Aligned_cols=100 Identities=14% Similarity=0.080 Sum_probs=61.2
Q ss_pred hcCCCCEEEEEcCCC-CccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--c--
Q 025059 28 YSHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--K-- 102 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~-G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~-- 102 (258)
-..++.+||-+|+|. |..+.++++....+|+++|.+++.++.+++. +. . ..+..+- ...+...+.. .
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga--~-~~~~~~~-~~~~~~~i~~~~~~~ 236 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC----GA--D-VTLVVDP-AKEEESSIIERIRSA 236 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----TC--S-EEEECCT-TTSCHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh----CC--C-EEEcCcc-cccHHHHHHHHhccc
Confidence 356899999999875 6666666665334799999999988877632 11 1 1222110 0122111111 1
Q ss_pred -CCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 103 -ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 103 -~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
...+|+|+..... ...+....++|+++|.++..
T Consensus 237 ~g~g~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 237 IGDLPNVTIDCSGN----------EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp SSSCCSEEEECSCC----------HHHHHHHHHHSCTTCEEEEC
T ss_pred cCCCCCEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 3579999764421 13466777899999999876
No 330
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.53 E-value=0.18 Score=43.21 Aligned_cols=91 Identities=16% Similarity=0.103 Sum_probs=61.3
Q ss_pred hcCCCCEEEEEcCCC-CccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 28 YSHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~-G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
-..++.+||-+|+|. |..+.++++....+++++|.+++.++.+++. + ... .+ .+. ..+ ...+
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----G--a~~-v~-~~~--~~~-------~~~~ 235 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSM----G--VKH-FY-TDP--KQC-------KEEL 235 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHT----T--CSE-EE-SSG--GGC-------CSCE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc----C--CCe-ec-CCH--HHH-------hcCC
Confidence 456899999999875 6666777666444999999999998887652 1 111 22 221 111 2279
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|+|+...+-. ..+....++|+++|.++..
T Consensus 236 D~vid~~g~~----------~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 236 DFIISTIPTH----------YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp EEEEECCCSC----------CCHHHHHTTEEEEEEEEEC
T ss_pred CEEEECCCcH----------HHHHHHHHHHhcCCEEEEE
Confidence 9997654322 2466778899999999876
No 331
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.49 E-value=0.25 Score=42.91 Aligned_cols=96 Identities=16% Similarity=0.080 Sum_probs=61.3
Q ss_pred hcCCCCEEEEEcCCC-CccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 28 YSHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~-G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
-..++.+||-+|+|. |..+.++++....+++++|.+++.++.+++. .. . ..+ |..+......+ .+.+
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~l-Ga-----~-~vi--~~~~~~~~~~~---~~g~ 258 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKAL-GA-----D-EVV--NSRNADEMAAH---LKSF 258 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH-TC-----S-EEE--ETTCHHHHHTT---TTCE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CC-----c-EEe--ccccHHHHHHh---hcCC
Confidence 356899999999875 6666677665444799999999998888652 11 1 122 21111111111 2579
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|+|+..-+.. ..+....++|+++|.++..
T Consensus 259 Dvvid~~g~~----------~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 259 DFILNTVAAP----------HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp EEEEECCSSC----------CCHHHHHTTEEEEEEEEEC
T ss_pred CEEEECCCCH----------HHHHHHHHHhccCCEEEEe
Confidence 9997654321 1355677899999998865
No 332
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.48 E-value=0.39 Score=41.63 Aligned_cols=99 Identities=16% Similarity=0.076 Sum_probs=63.9
Q ss_pred hcCCCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh----
Q 025059 28 YSHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE---- 101 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---- 101 (258)
-+.++.+||=+|+|. |..+.++++. +..+++++|.+++.++.+++.-. . ..+ |..+..+.+.+..
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa------~-~vi--~~~~~~~~~~i~~~~~~ 249 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGA------T-ATV--DPSAGDVVEAIAGPVGL 249 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC------S-EEE--CTTSSCHHHHHHSTTSS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC------C-EEE--CCCCcCHHHHHHhhhhc
Confidence 456899999999875 6666666665 44589999999998887765311 1 111 2222223222211
Q ss_pred cCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 102 KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 102 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
..+.+|+|+..-+. ...+..+.++|++||.++..
T Consensus 250 ~~gg~Dvvid~~G~----------~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 250 VPGGVDVVIECAGV----------AETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp STTCEEEEEECSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred cCCCCCEEEECCCC----------HHHHHHHHHHhccCCEEEEE
Confidence 23479999764321 24567788899999999876
No 333
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.39 E-value=0.2 Score=43.78 Aligned_cols=107 Identities=15% Similarity=0.057 Sum_probs=64.2
Q ss_pred cCCCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCc-hhhhhhh--cC
Q 025059 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAEN-FETQMQE--KA 103 (258)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~--~~ 103 (258)
.+++.+||-+|+|. |..+.++++. +...++++|.+++.++.+++. .++.+ |..+.. +.+.+.. ..
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l--------Ga~~i--~~~~~~~~~~~v~~~t~g 252 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ--------GFEIA--DLSLDTPLHEQIAALLGE 252 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT--------TCEEE--ETTSSSCHHHHHHHHHSS
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc--------CCcEE--ccCCcchHHHHHHHHhCC
Confidence 45889999999876 6677777765 444799999999988887542 22322 222211 2222211 23
Q ss_pred CceeEEEeccccccccC-----CHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 104 NQADLVCCFQHLQMCFE-----TEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~-----~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
..+|+|+..-+...... +.+.....+....++|++||.+++.
T Consensus 253 ~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 253 PEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp SCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 47999976543210000 0001123577788899999998765
No 334
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.06 E-value=0.23 Score=42.30 Aligned_cols=98 Identities=10% Similarity=-0.056 Sum_probs=61.8
Q ss_pred cCCCCEEEEEcCC--CCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh-cCCc
Q 025059 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (258)
Q Consensus 29 ~~~~~~VLDlGcG--~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~ 105 (258)
.+++.+||-.|++ -|..+..+++....+++++|.+++.++.+.+.+.. . .. .|..+..+...+.. ..+.
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~-----~-~~--~~~~~~~~~~~~~~~~~~~ 218 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGF-----D-GA--IDYKNEDLAAGLKRECPKG 218 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC-----S-EE--EETTTSCHHHHHHHHCTTC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC-----C-EE--EECCCHHHHHHHHHhcCCC
Confidence 4589999999983 35666666655334999999999887776333211 1 11 23223333322211 2357
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+|+|+...+ . ..+....++|++||.++..
T Consensus 219 ~d~vi~~~g-------~----~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 219 IDVFFDNVG-------G----EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp EEEEEESSC-------H----HHHHHHHTTEEEEEEEEEC
T ss_pred ceEEEECCC-------c----chHHHHHHHHhhCCEEEEE
Confidence 999976542 1 2577888999999999875
No 335
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.93 E-value=0.36 Score=41.53 Aligned_cols=96 Identities=14% Similarity=0.063 Sum_probs=60.9
Q ss_pred cCCC------CEEEEEcCCC-CccH-HHHH-Hc-CCCeEEEEecChh---HHHHHHHHHHhcCCCceeEEEEcCCCCCch
Q 025059 29 SHPY------VTVCDLYCGA-GVDV-DKWE-TA-LIANYIGIDVATS---GIGEARDTWENQRKNFIAEFFEADPCAENF 95 (258)
Q Consensus 29 ~~~~------~~VLDlGcG~-G~~~-~~~~-~~-~~~~v~gvD~s~~---~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (258)
.+++ .+||=+|+|. |..+ .+++ +. +..+++++|.+++ .++.+++. .++.+ |..+..+
T Consensus 164 ~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l--------Ga~~v--~~~~~~~ 233 (357)
T 2b5w_A 164 ASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL--------DATYV--DSRQTPV 233 (357)
T ss_dssp HTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT--------TCEEE--ETTTSCG
T ss_pred CCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc--------CCccc--CCCccCH
Confidence 4578 9999999864 5566 6666 54 4434999999988 77777532 22333 3333333
Q ss_pred hhhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 96 ETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 96 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+ +....+.+|+|+-.-+ . ...+..+.++|+++|.++..
T Consensus 234 ~~-i~~~~gg~Dvvid~~g------~----~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 234 ED-VPDVYEQMDFIYEATG------F----PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp GG-HHHHSCCEEEEEECSC------C----HHHHHHHHHHEEEEEEEEEC
T ss_pred HH-HHHhCCCCCEEEECCC------C----hHHHHHHHHHHhcCCEEEEE
Confidence 32 2111237999975432 1 13567778899999998876
No 336
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=92.92 E-value=0.56 Score=40.54 Aligned_cols=100 Identities=14% Similarity=0.054 Sum_probs=61.8
Q ss_pred cCCCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh-cCCc
Q 025059 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (258)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~ 105 (258)
..++.+||-+|+|. |..+.++++. +..+|+++|.+++.++.+++. +. . ..+..+-....+.+.+.. ..+.
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga--~-~vi~~~~~~~~~~~~i~~~t~gg 261 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL----GA--T-ECLNPKDYDKPIYEVICEKTNGG 261 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT----TC--S-EEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CC--c-EEEecccccchHHHHHHHHhCCC
Confidence 45889999999875 5566666665 555899999999988887642 10 1 122111001122222211 2347
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCC-cEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lkpg-G~~i~~ 145 (258)
+|+|+..-+. ...+....++|+++ |.++..
T Consensus 262 ~Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 262 VDYAVECAGR----------IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp BSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCEEEECCCC----------HHHHHHHHHHHhcCCCEEEEE
Confidence 9999764321 23567788899999 998865
No 337
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.89 E-value=0.72 Score=40.39 Aligned_cols=102 Identities=14% Similarity=-0.012 Sum_probs=61.7
Q ss_pred cCCCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 025059 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (258)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (258)
..++.+||=+|+|. |..+.++++. +..+++++|.+++.++.+++.-. . ..+ |..+..+.+.+.. ...
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa------~-~vi--~~~~~~~~~~i~~~t~g~ 281 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGA------D-HVI--DPTKENFVEAVLDYTNGL 281 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC------S-EEE--CTTTSCHHHHHHHHTTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC------C-EEE--cCCCCCHHHHHHHHhCCC
Confidence 45889999999864 5566666665 44589999999998888865421 1 122 2222233222211 234
Q ss_pred ceeEEEeccccccccCCH-HHHHHHHHHHHhcccCCcEEEEE
Q 025059 105 QADLVCCFQHLQMCFETE-ERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~-~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+|+|+-.-+ .. .....+++.+.+++++||.++..
T Consensus 282 g~D~vid~~g------~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 282 GAKLFLEATG------VPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp CCSEEEECSS------CHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred CCCEEEECCC------CcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 7999976432 12 12334444444666999999876
No 338
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.89 E-value=0.58 Score=40.41 Aligned_cols=100 Identities=13% Similarity=0.126 Sum_probs=61.7
Q ss_pred cCCCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh-cCCc
Q 025059 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (258)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~ 105 (258)
.+++.+||-+|+|. |..+.++++. +..+++++|.+++.++.+++.-. . ..+...-....+.+.+.. ..+.
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa------~-~vi~~~~~~~~~~~~v~~~~~~g 260 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA------T-ECINPQDFSKPIQEVLIEMTDGG 260 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC------S-EEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC------c-eEeccccccccHHHHHHHHhCCC
Confidence 45889999999875 5566666665 55489999999999888864311 1 122111001122222211 2347
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCC-cEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lkpg-G~~i~~ 145 (258)
+|+|+..... ...+....++|+++ |.++..
T Consensus 261 ~D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 261 VDYSFECIGN----------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp BSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCEEEECCCc----------HHHHHHHHHhhccCCcEEEEE
Confidence 9999764421 23567788899999 998875
No 339
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.84 E-value=0.99 Score=32.86 Aligned_cols=100 Identities=15% Similarity=0.094 Sum_probs=58.5
Q ss_pred CCEEEEEcCCC-CccH-HHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 32 YVTVCDLYCGA-GVDV-DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 32 ~~~VLDlGcG~-G~~~-~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
..+|+=+|||. |..+ ..+...+. +++++|.+++.++.+++. ...++.+|..+....... ....+|+|
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~--------~~~~~~gd~~~~~~l~~~--~~~~~d~v 74 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDE--------GFDAVIADPTDESFYRSL--DLEGVSAV 74 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT--------TCEEEECCTTCHHHHHHS--CCTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC--------CCcEEECCCCCHHHHHhC--CcccCCEE
Confidence 35788899875 3222 23333355 899999999887766532 356788998765432221 23578988
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
++... +.+ ....+....+.+. ...++....+..
T Consensus 75 i~~~~------~~~-~n~~~~~~a~~~~-~~~iia~~~~~~ 107 (141)
T 3llv_A 75 LITGS------DDE-FNLKILKALRSVS-DVYAIVRVSSPK 107 (141)
T ss_dssp EECCS------CHH-HHHHHHHHHHHHC-CCCEEEEESCGG
T ss_pred EEecC------CHH-HHHHHHHHHHHhC-CceEEEEEcChh
Confidence 76442 222 2333444444555 566666655543
No 340
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=92.59 E-value=0.088 Score=47.62 Aligned_cols=81 Identities=10% Similarity=0.067 Sum_probs=54.3
Q ss_pred CCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchh-----------hhhh
Q 025059 32 YVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE-----------TQMQ 100 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-----------~~~~ 100 (258)
..+++||.||.|++...+...+...+.++|+++.+.+.-+.++.... ...+++.|+.+.... ..+.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p---~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~ 164 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDP---ATHHFNEDIRDITLSHQEGVSDEAAAEHIR 164 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCT---TTCEEESCTHHHHCTTCTTSCHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCC---CcceeccchhhhhhccccccchhhHHhhhh
Confidence 36899999999999999987787678999999988877666652211 234667887543210 0011
Q ss_pred hcCCceeEEEecccc
Q 025059 101 EKANQADLVCCFQHL 115 (258)
Q Consensus 101 ~~~~~fD~V~~~~~l 115 (258)
.....+|+|+..+..
T Consensus 165 ~~~~~~Dvl~gGpPC 179 (482)
T 3me5_A 165 QHIPEHDVLLAGFPC 179 (482)
T ss_dssp HHSCCCSEEEEECCC
T ss_pred hcCCCCCEEEecCCC
Confidence 123468999876543
No 341
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.58 E-value=0.56 Score=41.48 Aligned_cols=102 Identities=13% Similarity=0.040 Sum_probs=65.9
Q ss_pred CCEEEEEcCCC-CccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 32 YVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 32 ~~~VLDlGcG~-G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
..+|+=+|+|. |..+...+......|+++|.+++.++.+++. .+..+.+|..+....... .-...|+|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~--------g~~vi~GDat~~~~L~~a--gi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF--------GMKVFYGDATRMDLLESA--GAAKAEVLI 73 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT--------TCCCEESCTTCHHHHHHT--TTTTCSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC--------CCeEEEcCCCCHHHHHhc--CCCccCEEE
Confidence 45688888875 4333333333333899999999998887632 456788998775543222 246789887
Q ss_pred eccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
+.. .+ ......+....+.+.|+..++....+..
T Consensus 74 v~~------~~-~~~n~~i~~~ar~~~p~~~Iiara~~~~ 106 (413)
T 3l9w_A 74 NAI------DD-PQTNLQLTEMVKEHFPHLQIIARARDVD 106 (413)
T ss_dssp ECC------SS-HHHHHHHHHHHHHHCTTCEEEEEESSHH
T ss_pred ECC------CC-hHHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 644 22 3344556667777889888877755543
No 342
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.56 E-value=0.37 Score=41.19 Aligned_cols=97 Identities=14% Similarity=0.085 Sum_probs=61.4
Q ss_pred cCCCCEEEEEcC--CCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 025059 29 SHPYVTVCDLYC--GAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (258)
Q Consensus 29 ~~~~~~VLDlGc--G~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (258)
+.++.+||-.|+ |-|..+..+++....+++++|.+++.++.+++. . . . .. .|..+..+.+.+.. ...
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~-g-a----~-~~--~d~~~~~~~~~~~~~~~~~ 234 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL-G-A----D-ET--VNYTHPDWPKEVRRLTGGK 234 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-T-C----S-EE--EETTSTTHHHHHHHHTTTT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc-C-C----C-EE--EcCCcccHHHHHHHHhCCC
Confidence 457899999998 456666666665334999999999888887542 1 1 1 12 23333333222211 124
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+|+|+...+ . ..+..+.++|+++|.++..
T Consensus 235 ~~d~vi~~~g-~----------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 235 GADKVVDHTG-A----------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp CEEEEEESSC-S----------SSHHHHHHHEEEEEEEEES
T ss_pred CceEEEECCC-H----------HHHHHHHHhhccCCEEEEE
Confidence 7999987654 2 1356677889999998765
No 343
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=92.51 E-value=0.35 Score=41.95 Aligned_cols=100 Identities=15% Similarity=0.157 Sum_probs=62.1
Q ss_pred cCCCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh-cCCc
Q 025059 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (258)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~ 105 (258)
.+++.+||=+|+|. |..+..+++. +..+|+++|.+++.++.+++. + .. ..+...-....+.+.+.. ..+.
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l----G--a~-~vi~~~~~~~~~~~~i~~~~~gg 263 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF----G--VN-EFVNPKDHDKPIQEVIVDLTDGG 263 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT----T--CC-EEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----C--Cc-EEEccccCchhHHHHHHHhcCCC
Confidence 45889999999874 6666666665 555899999999988877532 1 11 122111001222222211 2348
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCC-cEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lkpg-G~~i~~ 145 (258)
+|+|+..-.- ...+....++|++| |.++..
T Consensus 264 ~D~vid~~g~----------~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 264 VDYSFECIGN----------VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp BSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCEEEECCCC----------HHHHHHHHHHhhccCCEEEEE
Confidence 9999764421 24577788899997 998876
No 344
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.46 E-value=0.56 Score=40.54 Aligned_cols=98 Identities=15% Similarity=0.133 Sum_probs=61.5
Q ss_pred cCCCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCC--Cchhhhhhh-cC
Q 025059 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA--ENFETQMQE-KA 103 (258)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~-~~ 103 (258)
..++.+||-+|+|. |..+.++++. +..+|+++|.+++.++.+++. +. . ..+ |..+ ..+.+.+.. ..
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga--~-~vi--~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF----GA--T-DFV--NPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TC--C-EEE--CGGGCSSCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh----CC--c-eEE--eccccchhHHHHHHHHhC
Confidence 45889999999875 5666666665 444899999999998887642 10 1 122 2111 122222211 23
Q ss_pred CceeEEEeccccccccCCHHHHHHHHHHHHhcccCC-cEEEEE
Q 025059 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lkpg-G~~i~~ 145 (258)
+.+|+|+..-.. ...+....++|++| |.++..
T Consensus 261 ~g~D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 261 GGVDFSLECVGN----------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp SCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCCC----------HHHHHHHHHHhhcCCcEEEEE
Confidence 479999764421 23567788899999 998875
No 345
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.42 E-value=0.34 Score=41.50 Aligned_cols=98 Identities=12% Similarity=0.009 Sum_probs=61.3
Q ss_pred cCCCCEEEEEcCC--CCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCC-CCchhhhhhh-cCC
Q 025059 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPC-AENFETQMQE-KAN 104 (258)
Q Consensus 29 ~~~~~~VLDlGcG--~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~-~~~ 104 (258)
..++.+||-+|++ -|..+..++.....+++++|.+++.++.+++. +. . .. .|.. ...+...+.. ..+
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~----g~--~-~~--~d~~~~~~~~~~~~~~~~~ 237 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSI----GG--E-VF--IDFTKEKDIVGAVLKATDG 237 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHT----TC--C-EE--EETTTCSCHHHHHHHHHTS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHc----CC--c-eE--EecCccHhHHHHHHHHhCC
Confidence 4588999999983 45555555554334999999998887766542 11 1 11 2433 2233222211 123
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+|+|+...+. ...+..+.++|+++|.++..
T Consensus 238 ~~D~vi~~~g~----------~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 238 GAHGVINVSVS----------EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp CEEEEEECSSC----------HHHHHHHTTSEEEEEEEEEC
T ss_pred CCCEEEECCCc----------HHHHHHHHHHHhcCCEEEEE
Confidence 79999775431 24677888999999998865
No 346
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.21 E-value=0.32 Score=41.50 Aligned_cols=96 Identities=16% Similarity=0.101 Sum_probs=59.9
Q ss_pred cCCCCEEEEEcCCC--CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cC
Q 025059 29 SHPYVTVCDLYCGA--GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KA 103 (258)
Q Consensus 29 ~~~~~~VLDlGcG~--G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~ 103 (258)
.+++.+||-+|+|. |..+..+++. +. +++++|.+++.++.+++.-. . ..+ |..+..+.+.+.. ..
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga------~-~~~--~~~~~~~~~~~~~~~~~ 211 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGA------A-YVI--DTSTAPLYETVMELTNG 211 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTC------S-EEE--ETTTSCHHHHHHHHTTT
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCC------c-EEE--eCCcccHHHHHHHHhCC
Confidence 45889999999984 5555666555 55 99999999998888875311 1 122 2222333222211 23
Q ss_pred CceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
..+|+|+...+. ... ....++|++||.++..
T Consensus 212 ~g~Dvvid~~g~-------~~~----~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 212 IGADAAIDSIGG-------PDG----NELAFSLRPNGHFLTI 242 (340)
T ss_dssp SCEEEEEESSCH-------HHH----HHHHHTEEEEEEEEEC
T ss_pred CCCcEEEECCCC-------hhH----HHHHHHhcCCCEEEEE
Confidence 479999765421 212 2334799999999876
No 347
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=92.08 E-value=0.45 Score=40.68 Aligned_cols=96 Identities=15% Similarity=0.043 Sum_probs=60.6
Q ss_pred CCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cCCce
Q 025059 31 PYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KANQA 106 (258)
Q Consensus 31 ~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~f 106 (258)
++.+||-+|+|. |..+.++++. +..+++++|.+++.++.+++.-. . ..+ |..+..+.+.+.. ....+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga------~-~~~--~~~~~~~~~~v~~~~~g~g~ 237 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA------D-YVI--NPFEEDVVKEVMDITDGNGV 237 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTC------S-EEE--CTTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC------C-EEE--CCCCcCHHHHHHHHcCCCCC
Confidence 789999999964 5556666665 44489999999988887764211 1 122 3322333322221 12469
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|+|+..... ...+..+.++|+++|.++..
T Consensus 238 D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 238 DVFLEFSGA----------PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp EEEEECSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 999765421 23567778899999998765
No 348
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=91.99 E-value=0.47 Score=40.41 Aligned_cols=98 Identities=12% Similarity=0.056 Sum_probs=60.7
Q ss_pred cCCCCEEEEEcC--CCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCC-chhhhhhh-cCC
Q 025059 29 SHPYVTVCDLYC--GAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE-NFETQMQE-KAN 104 (258)
Q Consensus 29 ~~~~~~VLDlGc--G~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~-~~~ 104 (258)
..++.+||-.|+ |-|..+..+++....+++++|.+++.++.+++.+ +. . ..+ |..+. .+...+.. ..+
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~--~-~~~--d~~~~~~~~~~~~~~~~~ 224 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GF--D-DAF--NYKEESDLTAALKRCFPN 224 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CC--S-EEE--ETTSCSCSHHHHHHHCTT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CC--c-eEE--ecCCHHHHHHHHHHHhCC
Confidence 457899999997 3455566665553348999999988887775332 11 1 112 33221 22222211 125
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+|+|+...+ . ..+....++|++||.++..
T Consensus 225 ~~d~vi~~~g-------~----~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 225 GIDIYFENVG-------G----KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp CEEEEEESSC-------H----HHHHHHHTTEEEEEEEEEC
T ss_pred CCcEEEECCC-------H----HHHHHHHHHHhcCCEEEEE
Confidence 7999976542 1 2577788999999998865
No 349
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=91.77 E-value=0.9 Score=39.24 Aligned_cols=100 Identities=14% Similarity=0.077 Sum_probs=61.2
Q ss_pred cCCCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh-cCCc
Q 025059 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (258)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~ 105 (258)
..++.+||-+|+|. |..+.++++. +..+|+++|.+++.++.+++.-. . ..+..+-....+.+.+.. ..+.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa------~-~vi~~~~~~~~~~~~v~~~~~~g 265 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA------T-DCLNPRELDKPVQDVITELTAGG 265 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC------S-EEECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC------c-EEEccccccchHHHHHHHHhCCC
Confidence 34789999999874 5666666665 44489999999998888754211 1 122111001122222211 2347
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCC-cEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lkpg-G~~i~~ 145 (258)
+|+|+..-.- ...+....++|++| |.++..
T Consensus 266 ~Dvvid~~G~----------~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 266 VDYSLDCAGT----------AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp BSEEEESSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred ccEEEECCCC----------HHHHHHHHHHhhcCCCEEEEE
Confidence 9999764321 23567788899999 998865
No 350
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=91.65 E-value=0.82 Score=39.40 Aligned_cols=95 Identities=12% Similarity=0.095 Sum_probs=61.5
Q ss_pred CCCEEEEEc-CCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh-cCCce
Q 025059 31 PYVTVCDLY-CGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQA 106 (258)
Q Consensus 31 ~~~~VLDlG-cG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~f 106 (258)
++.+||=.| +|. |..+.++++. +..+++++|.+++.++.+++. + .. ..+ |..+ .+.+.+.. ..+.+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l----G--ad-~vi--~~~~-~~~~~v~~~~~~g~ 240 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL----G--AH-HVI--DHSK-PLAAEVAALGLGAP 240 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT----T--CS-EEE--CTTS-CHHHHHHTTCSCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc----C--CC-EEE--eCCC-CHHHHHHHhcCCCc
Confidence 678999998 554 7777777775 556999999999888877542 1 11 122 2111 22222211 24589
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|+|+...+ ....+..+.++|+++|.++..
T Consensus 241 Dvvid~~g----------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 241 AFVFSTTH----------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEECSC----------HHHHHHHHHHHSCTTCEEEEC
T ss_pred eEEEECCC----------chhhHHHHHHHhcCCCEEEEE
Confidence 99976432 224667788899999999875
No 351
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=91.60 E-value=0.77 Score=39.65 Aligned_cols=100 Identities=15% Similarity=0.102 Sum_probs=61.1
Q ss_pred cCCCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh-cCCc
Q 025059 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (258)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~ 105 (258)
..++.+||-+|+|. |..+.++++. +..+++++|.+++.++.+++.-. . ..+..+-....+.+.+.. ..+.
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa------~-~vi~~~~~~~~~~~~~~~~~~~g 261 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA------T-ECVNPQDYKKPIQEVLTEMSNGG 261 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC------S-EEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC------c-eEecccccchhHHHHHHHHhCCC
Confidence 45889999999875 6666666665 44489999999998888753210 1 122111001122222211 2347
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCC-cEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lkpg-G~~i~~ 145 (258)
+|+|+..-.. ...+....++|+++ |.++..
T Consensus 262 ~D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 262 VDFSFEVIGR----------LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp BSEEEECSCC----------HHHHHHHHHHBCTTTCEEEEC
T ss_pred CcEEEECCCC----------HHHHHHHHHHhhcCCcEEEEe
Confidence 9999764421 23566778899999 998865
No 352
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=91.54 E-value=0.39 Score=41.43 Aligned_cols=91 Identities=13% Similarity=0.066 Sum_probs=56.9
Q ss_pred CCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecCh---hHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 32 YVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVAT---SGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 32 ~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~---~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
+.+||-+|+|. |..+.++++. +. +++++|.++ +.++.+++. .++.+ | .+ .+.+.+....+.+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~--------ga~~v--~-~~-~~~~~~~~~~~~~ 247 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEET--------KTNYY--N-SS-NGYDKLKDSVGKF 247 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHH--------TCEEE--E-CT-TCSHHHHHHHCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHh--------CCcee--c-hH-HHHHHHHHhCCCC
Confidence 89999999843 4444555544 55 999999998 776666532 22222 3 22 2222221112579
Q ss_pred eEEEeccccccccCCHHHHHHHH-HHHHhcccCCcEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLL-QNVSSLLKPGGYFLGI 145 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l-~~i~~~LkpgG~~i~~ 145 (258)
|+|+...+.. ..+ +.+.++|+++|.++..
T Consensus 248 d~vid~~g~~----------~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 248 DVIIDATGAD----------VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EEEEECCCCC----------THHHHHHGGGEEEEEEEEEC
T ss_pred CEEEECCCCh----------HHHHHHHHHHHhcCCEEEEE
Confidence 9998765321 134 7788999999998876
No 353
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=91.50 E-value=0.44 Score=40.96 Aligned_cols=97 Identities=14% Similarity=0.097 Sum_probs=59.2
Q ss_pred cCCCCEEEEEcCC--CCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 025059 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (258)
Q Consensus 29 ~~~~~~VLDlGcG--~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (258)
..++.+||-.|++ -|..+..++.....+++++|.+++.++.+++. +. . .. .|..+..+...+.. ...
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga--~-~~--~d~~~~~~~~~~~~~~~~~ 238 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN----GA--H-EV--FNHREVNYIDKIKKYVGEK 238 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TC--S-EE--EETTSTTHHHHHHHHHCTT
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHc----CC--C-EE--EeCCCchHHHHHHHHcCCC
Confidence 4578999999973 35555555554334899999998887766432 11 1 11 23323233222211 234
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+|+|+...+ . ..+....++|+++|.++..
T Consensus 239 ~~D~vi~~~G-------~----~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 239 GIDIIIEMLA-------N----VNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp CEEEEEESCH-------H----HHHHHHHHHEEEEEEEEEC
T ss_pred CcEEEEECCC-------h----HHHHHHHHhccCCCEEEEE
Confidence 7999976542 1 2456678899999998875
No 354
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=91.36 E-value=0.38 Score=40.77 Aligned_cols=120 Identities=13% Similarity=0.127 Sum_probs=63.3
Q ss_pred CCCEEEEEcCCCCccHHHHH----Hc-CCC--eEEEEecCh--------hHHHHHHHHH-Hh----cCCCceeEEEEcCC
Q 025059 31 PYVTVCDLYCGAGVDVDKWE----TA-LIA--NYIGIDVAT--------SGIGEARDTW-EN----QRKNFIAEFFEADP 90 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~----~~-~~~--~v~gvD~s~--------~~l~~a~~~~-~~----~~~~~~~~~~~~d~ 90 (258)
+..+|||+|-|+|-+..... +. +.. +++.+|..+ ..+....+.+ .. ........+..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 45789999999997654322 12 222 456666421 1122222212 11 11122456777775
Q ss_pred CCCchhhhhhh-cCCceeEEEec-cccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCchHHHHHHHH
Q 025059 91 CAENFETQMQE-KANQADLVCCF-QHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQK 158 (258)
Q Consensus 91 ~~~~~~~~~~~-~~~~fD~V~~~-~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~~~~~~~~~ 158 (258)
.. .++. ...++|+|..- |+... .+.---..+++.|+++++|||.+. |......+.+.+.+
T Consensus 176 ~~-----~l~~l~~~~~Da~flDgFsP~k--NPeLWs~e~f~~l~~~~~pgg~la-TYtaag~VRR~L~~ 237 (308)
T 3vyw_A 176 RK-----RIKEVENFKADAVFHDAFSPYK--NPELWTLDFLSLIKERIDEKGYWV-SYSSSLSVRKSLLT 237 (308)
T ss_dssp HH-----HGGGCCSCCEEEEEECCSCTTT--SGGGGSHHHHHHHHTTEEEEEEEE-ESCCCHHHHHHHHH
T ss_pred HH-----HHhhhcccceeEEEeCCCCccc--CcccCCHHHHHHHHHHhCCCcEEE-EEeCcHHHHHHHHH
Confidence 32 2221 34579999653 22111 000012679999999999999875 44444555555543
No 355
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=91.33 E-value=0.38 Score=41.06 Aligned_cols=98 Identities=16% Similarity=0.114 Sum_probs=63.5
Q ss_pred hcCCCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cC
Q 025059 28 YSHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KA 103 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~ 103 (258)
...++.+||=+|+|. |..+.++++. +..+++++|.+++.++.+++.-. . ..+..+ . .+.+.+.. ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa------~-~~i~~~--~-~~~~~v~~~t~g 237 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA------D-AAVKSG--A-GAADAIRELTGG 237 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC------S-EEEECS--T-THHHHHHHHHGG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC------C-EEEcCC--C-cHHHHHHHHhCC
Confidence 356899999999875 6666777665 46699999999998888764311 1 122221 1 22222111 23
Q ss_pred CceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
..+|+|+-.-+- ...+....++|++||.++..
T Consensus 238 ~g~d~v~d~~G~----------~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 238 QGATAVFDFVGA----------QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp GCEEEEEESSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCeEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 479999764421 23677788899999999876
No 356
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.09 E-value=0.45 Score=40.66 Aligned_cols=99 Identities=16% Similarity=0.192 Sum_probs=61.0
Q ss_pred hcCCCCEEEEEcCCC--CccHHHHHHcC-CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh-cC
Q 025059 28 YSHPYVTVCDLYCGA--GVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KA 103 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~--G~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~ 103 (258)
-..++.+||-.|+|. |..+..++... ..+++++|.+++.++.+++. . . . ..+ |..+......+.. ..
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~-g-~----~-~~~--~~~~~~~~~~~~~~~~ 237 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-G-A----D-YVI--NASMQDPLAEIRRITE 237 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-T-C----S-EEE--ETTTSCHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-C-C----C-EEe--cCCCccHHHHHHHHhc
Confidence 345889999999984 44444554443 34899999999888877542 1 1 1 122 2222222111111 22
Q ss_pred -CceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 104 -NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 104 -~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+.+|+|+...+- ...+....++|+++|.++..
T Consensus 238 ~~~~d~vi~~~g~----------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 238 SKGVDAVIDLNNS----------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp TSCEEEEEESCCC----------HHHHTTGGGGEEEEEEEEEC
T ss_pred CCCceEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 589999765421 23567788899999998875
No 357
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.90 E-value=4.1 Score=33.26 Aligned_cols=112 Identities=13% Similarity=-0.020 Sum_probs=67.0
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecC------------hhHHHHHHHHHHhcCCCceeEEEEcCCCCCch
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVA------------TSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (258)
.+.+||=-|++.|. .+..++..+. +|+.+|.+ ...++.+.......+ .++.++.+|+.+..-
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHHH
Confidence 35678888876652 2333444465 89999987 666666655554432 378899999977432
Q ss_pred hh----hhhhcCCceeEEEecccccccc--CCHHHH-----------HHHHHHHHhcccCCcEEEEE
Q 025059 96 ET----QMQEKANQADLVCCFQHLQMCF--ETEERA-----------RRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 96 ~~----~~~~~~~~fD~V~~~~~l~~~~--~~~~~~-----------~~~l~~i~~~LkpgG~~i~~ 145 (258)
.. ......+..|+++.+.+....- .+.+.. -.+++.+...|+.+|.++.+
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 11 1111235789998876543210 122222 23455677777888887766
No 358
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.84 E-value=3.3 Score=33.46 Aligned_cols=109 Identities=13% Similarity=0.051 Sum_probs=67.2
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (258)
.+.++|=.|++.|. .+..+++.+. +|+.+|.+++.++...+.+. .++.++.+|+.+..-.. ......
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFG-----PRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC-----CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 36788888876652 2333444465 89999999988877666552 26889999997743211 111223
Q ss_pred CceeEEEeccccccc----cCCHHHHH-----------HHHHHHHhcccCCcEEEEE
Q 025059 104 NQADLVCCFQHLQMC----FETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~----~~~~~~~~-----------~~l~~i~~~LkpgG~~i~~ 145 (258)
+..|+++.+.+.... -.+.++.+ .+.+.+...++.+|.++.+
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 689999887654321 01233332 3445666777778887766
No 359
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=90.70 E-value=0.47 Score=41.58 Aligned_cols=59 Identities=5% Similarity=-0.050 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHc--------CCCeEEEEecChhHHHHHHHHHHh
Q 025059 18 EFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETA--------LIANYIGIDVATSGIGEARDTWEN 76 (258)
Q Consensus 18 ~~~k~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~--------~~~~v~gvD~s~~~l~~a~~~~~~ 76 (258)
.|+...+.....+....|+|+|.|+|.++..+++. ...+|+.||+|+...+.-++++..
T Consensus 67 ~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 67 LWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp HHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred HHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 66655554444455568999999999998777653 123899999999998877776654
No 360
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=90.48 E-value=0.37 Score=40.59 Aligned_cols=87 Identities=11% Similarity=-0.070 Sum_probs=56.4
Q ss_pred cCCCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
.+++.+||=+|+|. |..+.++++. +. +++++| +++.++.+++. .+..+.-| . +.+ ...+
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~l--------Ga~~v~~d-----~-~~v---~~g~ 200 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKR--------GVRHLYRE-----P-SQV---TQKY 200 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHH--------TEEEEESS-----G-GGC---CSCE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHc--------CCCEEEcC-----H-HHh---CCCc
Confidence 34899999999964 6666777665 55 999999 99888888653 22222212 1 111 5689
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|+|+-.-+- ..+....++|+++|.++..
T Consensus 201 Dvv~d~~g~-----------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 201 FAIFDAVNS-----------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp EEEECC------------------TTGGGEEEEEEEEEE
T ss_pred cEEEECCCc-----------hhHHHHHHHhcCCCEEEEE
Confidence 999653311 1225578899999999876
No 361
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.31 E-value=0.076 Score=45.56 Aligned_cols=95 Identities=15% Similarity=0.015 Sum_probs=59.4
Q ss_pred CCCEEEEEcCCC-CccHHHHHHcC--CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCC-CchhhhhhhcCCce
Q 025059 31 PYVTVCDLYCGA-GVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQEKANQA 106 (258)
Q Consensus 31 ~~~~VLDlGcG~-G~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~f 106 (258)
++.+||-+|+|. |..+.++++.. ..+++++|.+++.++.+++.-. . ..+ |..+ ......+. ....+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa------~-~vi--~~~~~~~~~~~~~-~g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGA------D-YVS--EMKDAESLINKLT-DGLGA 239 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTC------S-EEE--CHHHHHHHHHHHH-TTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCC------C-EEe--ccccchHHHHHhh-cCCCc
Confidence 789999999974 55666666553 4589999999998888765311 1 111 1101 11111111 13379
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|+|+..-.. ...+..+.++|++||.++..
T Consensus 240 D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 240 SIAIDLVGT----------EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEEESSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred cEEEECCCC----------hHHHHHHHHHhhcCCEEEEe
Confidence 999765421 23567778899999998875
No 362
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=90.30 E-value=0.58 Score=40.63 Aligned_cols=100 Identities=20% Similarity=0.115 Sum_probs=60.7
Q ss_pred cCCCCEEEEEcCCC-CccHHHHHHcCC-CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCC-CCchhhhhhh--cC
Q 025059 29 SHPYVTVCDLYCGA-GVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPC-AENFETQMQE--KA 103 (258)
Q Consensus 29 ~~~~~~VLDlGcG~-G~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~--~~ 103 (258)
..++.+||-+|+|. |..+.++++... .+++++|.+++.++.+++. +. . ..+..+.. +..+.+.+.. ..
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga--~-~vi~~~~~~~~~~~~~v~~~~~g 265 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI----GA--D-LTLNRRETSVEERRKAIMDITHG 265 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT----TC--S-EEEETTTSCHHHHHHHHHHHTTT
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc----CC--c-EEEeccccCcchHHHHHHHHhCC
Confidence 46789999999764 556666666533 5999999999888877632 10 1 22221100 1122222211 12
Q ss_pred CceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
..+|+|+..-.. ...+....++|+++|.++..
T Consensus 266 ~g~Dvvid~~g~----------~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 266 RGADFILEATGD----------SRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp SCEEEEEECSSC----------TTHHHHHHHHEEEEEEEEEC
T ss_pred CCCcEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 369999765421 12466677899999998865
No 363
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=90.22 E-value=1.4 Score=37.55 Aligned_cols=95 Identities=16% Similarity=0.115 Sum_probs=59.3
Q ss_pred CCCEEEEE-cCCC-CccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh-cCCcee
Q 025059 31 PYVTVCDL-YCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQAD 107 (258)
Q Consensus 31 ~~~~VLDl-GcG~-G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~fD 107 (258)
++.+||=. |+|. |..+.++++....+++++|.+++.++.+++.-. . ..+ |..+ .+.+.+.. ....+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa------~-~vi--~~~~-~~~~~~~~~~~~g~D 219 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGA------D-IVL--NHKE-SLLNQFKTQGIELVD 219 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTC------S-EEE--CTTS-CHHHHHHHHTCCCEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC------c-EEE--ECCc-cHHHHHHHhCCCCcc
Confidence 68999999 4553 556666666533499999999988888876311 1 122 2111 22222211 345799
Q ss_pred EEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+|+...+ ....+..+.++|+++|.++..
T Consensus 220 vv~d~~g----------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 220 YVFCTFN----------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEEESSC----------HHHHHHHHHHHEEEEEEEEES
T ss_pred EEEECCC----------chHHHHHHHHHhccCCEEEEE
Confidence 9976432 234567788899999999754
No 364
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.15 E-value=6.4 Score=31.74 Aligned_cols=113 Identities=5% Similarity=-0.029 Sum_probs=67.8
Q ss_pred CCCEEEEEcCC--CCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh----hhh
Q 025059 31 PYVTVCDLYCG--AGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQE 101 (258)
Q Consensus 31 ~~~~VLDlGcG--~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~ 101 (258)
.+.+||=.|++ .|. .+..++..+. +|+.++.++...+.+.+.....+. .++.++.+|+.+..-... +..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHHH
Confidence 35678888876 332 3344444565 899999887666665555443321 168899999987542111 112
Q ss_pred cCCceeEEEecccccc--------ccCCHHHHH-----------HHHHHHHhcccCCcEEEEE
Q 025059 102 KANQADLVCCFQHLQM--------CFETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 102 ~~~~fD~V~~~~~l~~--------~~~~~~~~~-----------~~l~~i~~~LkpgG~~i~~ 145 (258)
..+..|+++.+.+... .-.+.+... .+++.+...++++|.++.+
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 146 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTL 146 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEE
Confidence 2357899887765421 012233332 3556777788888888776
No 365
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.14 E-value=2.1 Score=35.29 Aligned_cols=84 Identities=10% Similarity=-0.055 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCC-chh----hhhhhc
Q 025059 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE-NFE----TQMQEK 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~----~~~~~~ 102 (258)
.+.+||=.|++.| ..+..++..+. +|+.++.++..++.+.+.+.... +.++.++.+|+.+. .-. ..+...
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 3567887776655 12333444465 89999999988887777665543 22688999999875 311 112222
Q ss_pred CCceeEEEeccccc
Q 025059 103 ANQADLVCCFQHLQ 116 (258)
Q Consensus 103 ~~~fD~V~~~~~l~ 116 (258)
.+..|+++.+.+..
T Consensus 89 ~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 89 FGKLDILVNNAGVA 102 (311)
T ss_dssp HSSCCEEEECCCCC
T ss_pred CCCCCEEEECCccc
Confidence 36899998877653
No 366
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=89.80 E-value=2.1 Score=32.45 Aligned_cols=106 Identities=14% Similarity=0.041 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
...-|||+|-|+|..-..+... +...++.+|-.-.+-.. .... .-.++.+|+.+.-- .....-..+.-++
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~------~~P~--~e~~ilGdi~~tL~-~~~~r~g~~a~La 110 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPD------STPP--EAQLILGDIRETLP-ATLERFGATASLV 110 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGG------GCCC--GGGEEESCHHHHHH-HHHHHHCSCEEEE
T ss_pred CCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCC------CCCc--hHheecccHHHHHH-HHHHhcCCceEEE
Confidence 4456999999999877777555 45689999843211000 0000 12355555422100 0000012344444
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+-.+.++--.+......+-.-+..+|.|||+++-.
T Consensus 111 HaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~ 146 (174)
T 3iht_A 111 HADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSS 146 (174)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEES
T ss_pred EeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeC
Confidence 444444431111122344555688999999998754
No 367
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=89.71 E-value=0.33 Score=41.82 Aligned_cols=97 Identities=14% Similarity=0.055 Sum_probs=60.2
Q ss_pred hcCCCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCC-chhhhhhhcCC
Q 025059 28 YSHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE-NFETQMQEKAN 104 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~ 104 (258)
-.+++.+||-+|+|. |..+.++++. +. +++++|.+++.++.+++.- . . ..+..+ +. .+...+ .+
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lG--a----~-~v~~~~--~~~~~~~~~---~~ 242 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMG--A----D-HYIATL--EEGDWGEKY---FD 242 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHT--C----S-EEEEGG--GTSCHHHHS---CS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcC--C----C-EEEcCc--CchHHHHHh---hc
Confidence 355899999999864 5556666665 55 8999999999888886521 1 1 122211 11 222222 15
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+|+|+....... ...+....++|++||.++..
T Consensus 243 ~~D~vid~~g~~~--------~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 243 TFDLIVVCASSLT--------DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp CEEEEEECCSCST--------TCCTTTGGGGEEEEEEEEEC
T ss_pred CCCEEEECCCCCc--------HHHHHHHHHHhcCCCEEEEe
Confidence 7999976543200 12345567899999998765
No 368
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=89.67 E-value=1.3 Score=37.68 Aligned_cols=96 Identities=15% Similarity=0.072 Sum_probs=60.9
Q ss_pred cCCCCEEEEEcCC--CCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 025059 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (258)
Q Consensus 29 ~~~~~~VLDlGcG--~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (258)
.+++.+||=.|++ -|..+..+++....+++++|.+++.++.+++.- ....+..+ ..+.+.+.. ...
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g-------a~~v~~~~---~~~~~~v~~~~~~~ 226 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVG-------ADIVLPLE---EGWAKAVREATGGA 226 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHT-------CSEEEESS---TTHHHHHHHHTTTS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcC-------CcEEecCc---hhHHHHHHHHhCCC
Confidence 3478999999973 366666666654349999999999888776531 11222222 223222211 233
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+|+|+...+. ..+....++|++||.++..
T Consensus 227 g~Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 227 GVDMVVDPIGG-----------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp CEEEEEESCC-------------CHHHHHHTEEEEEEEEEC
T ss_pred CceEEEECCch-----------hHHHHHHHhhcCCCEEEEE
Confidence 79999765431 1466778899999999876
No 369
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=89.67 E-value=0.47 Score=40.47 Aligned_cols=95 Identities=15% Similarity=0.076 Sum_probs=59.1
Q ss_pred CCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh-cCCcee
Q 025059 31 PYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQAD 107 (258)
Q Consensus 31 ~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~fD 107 (258)
++.+||-+|+|. |..+.++++. +..+++++|.+++.++.+++. . . .. .|..+..+.+.+.. ....+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l--a-----~-~v--~~~~~~~~~~~~~~~~~~g~D 233 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY--A-----D-RL--VNPLEEDLLEVVRRVTGSGVE 233 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT--C-----S-EE--ECTTTSCHHHHHHHHHSSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh--H-----H-hc--cCcCccCHHHHHHHhcCCCCC
Confidence 789999999864 5556666665 434899999998777666432 1 1 11 23222233222211 134799
Q ss_pred EEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+|+....- ...++...++|+++|.++..
T Consensus 234 ~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 234 VLLEFSGN----------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp EEEECSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 99765421 23466778899999998765
No 370
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.62 E-value=1.9 Score=32.93 Aligned_cols=101 Identities=14% Similarity=0.116 Sum_probs=58.1
Q ss_pred CCEEEEEcCCC-CccH-HHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 32 YVTVCDLYCGA-GVDV-DKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 32 ~~~VLDlGcG~-G~~~-~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
+.+|+=+|||. |..+ ..+... +. .|+++|.+++.++.+++ . .+..+.+|..+........ .-..+|+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~----~----g~~~~~gd~~~~~~l~~~~-~~~~ad~ 108 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRS----E----GRNVISGDATDPDFWERIL-DTGHVKL 108 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHH----T----TCCEEECCTTCHHHHHTBC-SCCCCCE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHH----C----CCCEEEcCCCCHHHHHhcc-CCCCCCE
Confidence 46899999885 3333 333334 55 89999999987766543 1 3456777875533211100 1346898
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
|++.. .+..... .+....+.+.|++.++....+.
T Consensus 109 vi~~~------~~~~~~~-~~~~~~~~~~~~~~ii~~~~~~ 142 (183)
T 3c85_A 109 VLLAM------PHHQGNQ-TALEQLQRRNYKGQIAAIAEYP 142 (183)
T ss_dssp EEECC------SSHHHHH-HHHHHHHHTTCCSEEEEEESSH
T ss_pred EEEeC------CChHHHH-HHHHHHHHHCCCCEEEEEECCH
Confidence 87643 2233233 3334556667788887765543
No 371
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=89.41 E-value=1.7 Score=36.68 Aligned_cols=97 Identities=21% Similarity=0.163 Sum_probs=60.2
Q ss_pred cCCCCEEEEEcC--CCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 025059 29 SHPYVTVCDLYC--GAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (258)
Q Consensus 29 ~~~~~~VLDlGc--G~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (258)
.+++.+||-.|+ |-|..+..++.....+++++|.+++.++.+++. . . . .. .|..+......+.. ...
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~-g-~----~-~~--~d~~~~~~~~~i~~~~~~~ 213 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL-G-C----H-HT--INYSTQDFAEVVREITGGK 213 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-T-C----S-EE--EETTTSCHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-C-C----C-EE--EECCCHHHHHHHHHHhCCC
Confidence 457899999995 345555555554334999999998888777542 1 1 1 11 23333333222211 234
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+|+|+...+- ..+..+.++|++||.++..
T Consensus 214 ~~d~vi~~~g~-----------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 214 GVDVVYDSIGK-----------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp CEEEEEECSCT-----------TTHHHHHHTEEEEEEEEEC
T ss_pred CCeEEEECCcH-----------HHHHHHHHhhccCCEEEEE
Confidence 79999765431 2466778899999998765
No 372
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=89.37 E-value=2.5 Score=35.79 Aligned_cols=98 Identities=9% Similarity=0.030 Sum_probs=59.4
Q ss_pred cCCCCEEEEEcCCCC-ccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhh--hcCC
Q 025059 29 SHPYVTVCDLYCGAG-VDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ--EKAN 104 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G-~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~ 104 (258)
..++.+||=.|+|.. ..+..+++. +...++++|.+++-++.|++.-. . ..+.. .+....+... ....
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa------~-~~i~~--~~~~~~~~~~~~~~~~ 228 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA------M-QTFNS--SEMSAPQMQSVLRELR 228 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC------S-EEEET--TTSCHHHHHHHHGGGC
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCC------e-EEEeC--CCCCHHHHHHhhcccC
Confidence 458899999999763 344444444 55678999999998887764311 1 22222 1222211111 1235
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+|+|+..-+ ....+....++|++||.+++.
T Consensus 229 g~d~v~d~~G----------~~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 229 FNQLILETAG----------VPQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp SSEEEEECSC----------SHHHHHHHHHHCCTTCEEEEC
T ss_pred Cccccccccc----------ccchhhhhhheecCCeEEEEE
Confidence 6788865432 124566777899999999876
No 373
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=89.36 E-value=0.88 Score=38.44 Aligned_cols=96 Identities=16% Similarity=0.128 Sum_probs=61.1
Q ss_pred cCCCCEEEEEc-CC-CCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cC
Q 025059 29 SHPYVTVCDLY-CG-AGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KA 103 (258)
Q Consensus 29 ~~~~~~VLDlG-cG-~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~ 103 (258)
.+++.+||=.| +| -|..+..+++. +. +++++|.+++.++.+++.- . . ..+ |..+..+.+.+.. ..
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~G--a----~-~~~--~~~~~~~~~~~~~~~~~ 207 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALG--A----W-ETI--DYSHEDVAKRVLELTDG 207 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHT--C----S-EEE--ETTTSCHHHHHHHHTTT
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcC--C----C-EEE--eCCCccHHHHHHHHhCC
Confidence 45789999998 33 35556666555 55 9999999999888876431 1 1 122 2222333322221 23
Q ss_pred CceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
..+|+|+...+. ..+....++|++||.++..
T Consensus 208 ~g~Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 208 KKCPVVYDGVGQ-----------DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp CCEEEEEESSCG-----------GGHHHHHTTEEEEEEEEEC
T ss_pred CCceEEEECCCh-----------HHHHHHHHHhcCCCEEEEE
Confidence 479999765432 2466778899999999876
No 374
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=89.33 E-value=4.1 Score=33.33 Aligned_cols=112 Identities=13% Similarity=-0.040 Sum_probs=65.4
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecCh-hHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhc
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVAT-SGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEK 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~-~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~ 102 (258)
.+.++|=-|++.|. .+..++..+. +|+.+|... ..++...+.+...+ .++.++.+|+.+..-.. .....
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAG--GRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 57789988877652 2334444465 788886554 55555555554432 27889999997743211 11112
Q ss_pred CCceeEEEeccccccc----cCCHHHH-----------HHHHHHHHhcccCCcEEEEE
Q 025059 103 ANQADLVCCFQHLQMC----FETEERA-----------RRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~----~~~~~~~-----------~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+..|+++.+.+.... -.+.++. -.+++.+...|+++|.++.+
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 3578999887654211 0122322 23456667778888887766
No 375
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=89.31 E-value=1.1 Score=38.29 Aligned_cols=97 Identities=11% Similarity=-0.059 Sum_probs=58.9
Q ss_pred cCCCCEEEEEcC--CCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 025059 29 SHPYVTVCDLYC--GAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (258)
Q Consensus 29 ~~~~~~VLDlGc--G~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (258)
..++.+||-.|+ |-|..+..++.....+++++|.+++.++.+++. . . . .. .|..+..+.+.+.. ...
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-g-~----~-~~--~~~~~~~~~~~~~~~~~~~ 230 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL-G-A----A-AG--FNYKKEDFSEATLKFTKGA 230 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-T-C----S-EE--EETTTSCHHHHHHHHTTTS
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-C-C----c-EE--EecCChHHHHHHHHHhcCC
Confidence 347899999984 335555555554334899999999888877432 1 1 1 11 23323333222211 234
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+|+|+...+- ..+....++|++||.++..
T Consensus 231 ~~d~vi~~~G~-----------~~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 231 GVNLILDCIGG-----------SYWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp CEEEEEESSCG-----------GGHHHHHHHEEEEEEEEEC
T ss_pred CceEEEECCCc-----------hHHHHHHHhccCCCEEEEE
Confidence 79999765532 1355667889999998876
No 376
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=89.21 E-value=4.1 Score=33.73 Aligned_cols=111 Identities=10% Similarity=-0.091 Sum_probs=65.9
Q ss_pred CCCEEEEEcCCCC-----ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhh
Q 025059 31 PYVTVCDLYCGAG-----VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQE 101 (258)
Q Consensus 31 ~~~~VLDlGcG~G-----~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~ 101 (258)
.+.+||=.|++.| ..+..+++.+. +|+.++.++...+.+.+.....+ ++.++.+|+.+..-.. ....
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHH
Confidence 4678888887633 23344455565 89999988765555444433332 5788999997743211 1122
Q ss_pred cCCceeEEEecccccc--------ccCCHHHH-----------HHHHHHHHhcccCCcEEEEE
Q 025059 102 KANQADLVCCFQHLQM--------CFETEERA-----------RRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 102 ~~~~fD~V~~~~~l~~--------~~~~~~~~-----------~~~l~~i~~~LkpgG~~i~~ 145 (258)
..+..|+++.+.+... .-.+.++. ..+++.+...|+.+|.++.+
T Consensus 106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~i 168 (293)
T 3grk_A 106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTL 168 (293)
T ss_dssp HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEE
Confidence 3468999988765432 01122322 23445666677778888766
No 377
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=89.15 E-value=0.8 Score=39.24 Aligned_cols=98 Identities=10% Similarity=-0.076 Sum_probs=60.3
Q ss_pred cCCC--CEEEEEcCC--CCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh-c
Q 025059 29 SHPY--VTVCDLYCG--AGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-K 102 (258)
Q Consensus 29 ~~~~--~~VLDlGcG--~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~ 102 (258)
..++ .+||-.|++ -|..+..++.. +..+++++|.+++.++.+++.+ +. . .. .|..+..+...+.. .
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~--~-~~--~d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GF--D-AA--INYKKDNVAEQLRESC 227 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CC--S-EE--EETTTSCHHHHHHHHC
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CC--c-eE--EecCchHHHHHHHHhc
Confidence 4578 999999983 34555555554 4348999999987777665422 11 1 11 23333333222211 1
Q ss_pred CCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+.+|+|+...+ . ..+....++|++||.++..
T Consensus 228 ~~~~d~vi~~~G-------~----~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 228 PAGVDVYFDNVG-------G----NISDTVISQMNENSHIILC 259 (357)
T ss_dssp TTCEEEEEESCC-------H----HHHHHHHHTEEEEEEEEEC
T ss_pred CCCCCEEEECCC-------H----HHHHHHHHHhccCcEEEEE
Confidence 237999976542 1 4567788899999998865
No 378
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.14 E-value=0.75 Score=38.86 Aligned_cols=96 Identities=14% Similarity=0.137 Sum_probs=59.6
Q ss_pred cCCCCEEEEEcC--CCCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cC
Q 025059 29 SHPYVTVCDLYC--GAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KA 103 (258)
Q Consensus 29 ~~~~~~VLDlGc--G~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~ 103 (258)
.+++.+||-.|+ |-|..+..++.. +. +++++|.+++.++.+++. .. . .. .|..+......+.. ..
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~--g~----~-~~--~~~~~~~~~~~~~~~~~~ 207 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKA--GA----W-QV--INYREEDLVERLKEITGG 207 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH--TC----S-EE--EETTTSCHHHHHHHHTTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc--CC----C-EE--EECCCccHHHHHHHHhCC
Confidence 447899999994 335555555544 55 899999998888877652 11 1 11 23333333222211 13
Q ss_pred CceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
..+|+|+...+ . ..+..+.++|++||.++..
T Consensus 208 ~~~D~vi~~~g-~----------~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 208 KKVRVVYDSVG-R----------DTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp CCEEEEEECSC-G----------GGHHHHHHTEEEEEEEEEC
T ss_pred CCceEEEECCc-h----------HHHHHHHHHhcCCCEEEEE
Confidence 46999987653 1 2467778899999998765
No 379
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=88.85 E-value=0.34 Score=40.66 Aligned_cols=63 Identities=19% Similarity=0.212 Sum_probs=40.5
Q ss_pred eeEEEEcCCCCCchhhhhhhcCCceeEEEecccccccc--C--------------CHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 82 IAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCF--E--------------TEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 82 ~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~--~--------------~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+..++++|+.+ ....+ ++++||+|++.--....- . ....+..++.++.++|+|||.+++.
T Consensus 21 ~~~i~~gD~~~--~l~~l--~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 21 VHRLHVGDARE--VLASF--PEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp CEEEEESCHHH--HHTTS--CTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEECcHHH--HHhhC--CCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 56889999743 11112 467999998864321100 0 0112456788999999999999888
Q ss_pred EcC
Q 025059 146 TPD 148 (258)
Q Consensus 146 ~~~ 148 (258)
..+
T Consensus 97 ~~d 99 (297)
T 2zig_A 97 VGD 99 (297)
T ss_dssp ECC
T ss_pred ECC
Confidence 664
No 380
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=88.84 E-value=8.6 Score=31.66 Aligned_cols=112 Identities=13% Similarity=0.044 Sum_probs=65.4
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhH-HHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhc
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSG-IGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEK 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~-l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~ 102 (258)
.+.+||=.|++.|. .+..++..+. +|+.+|.++.. .+.+.+..... +.++.++.+|+.+..-.. .....
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKE--GVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTT--TCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 35688888876652 2333444455 89999988753 33344333333 237889999997743211 11122
Q ss_pred CCceeEEEecccccccc-----CCHHHH-----------HHHHHHHHhcccCCcEEEEE
Q 025059 103 ANQADLVCCFQHLQMCF-----ETEERA-----------RRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~~-----~~~~~~-----------~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+..|+++.+.+..... .+.++. -.+++.+...|+.+|.++.+
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 35789998775442211 123333 34556777788888987766
No 381
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=88.57 E-value=1.1 Score=38.53 Aligned_cols=97 Identities=12% Similarity=0.006 Sum_probs=60.9
Q ss_pred cCCCCEEEEEc-CC-CCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh-cCCc
Q 025059 29 SHPYVTVCDLY-CG-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (258)
Q Consensus 29 ~~~~~~VLDlG-cG-~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~ 105 (258)
.+++.+||-.| +| -|..+..+++....+++++|.+++.++.+++. + .. ..+ |..+..+.+.+.. ....
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~----G--a~-~~~--~~~~~~~~~~~~~~~~~g 231 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSL----G--CD-RPI--NYKTEPVGTVLKQEYPEG 231 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----T--CS-EEE--ETTTSCHHHHHHHHCTTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc----C--Cc-EEE--ecCChhHHHHHHHhcCCC
Confidence 45889999999 34 46666666665434899999998888777642 1 11 122 2222223222211 2357
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+|+|+...+ . ..+..+.++|+++|.++..
T Consensus 232 ~D~vid~~g------~-----~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 232 VDVVYESVG------G-----AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp EEEEEECSC------T-----HHHHHHHHHEEEEEEEEEC
T ss_pred CCEEEECCC------H-----HHHHHHHHHHhcCCEEEEE
Confidence 999976542 1 3567788899999998776
No 382
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=88.35 E-value=7.5 Score=31.35 Aligned_cols=81 Identities=7% Similarity=-0.109 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCCCccHH----HHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhc
Q 025059 31 PYVTVCDLYCGAGVDVD----KWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEK 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~----~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~ 102 (258)
.+.+||=.|++.| ... .++..+. +|+.+|.++..++...+.+...+ .++.++.+|+.+..-.. .+...
T Consensus 28 ~~k~vlITGas~g-IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 28 SGQVAVVTGASRG-IGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHh
Confidence 4678888886654 333 3344455 89999999988888777765542 27889999997643211 11122
Q ss_pred CCceeEEEecccc
Q 025059 103 ANQADLVCCFQHL 115 (258)
Q Consensus 103 ~~~fD~V~~~~~l 115 (258)
.+..|+++.+.+.
T Consensus 104 ~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 104 HGRCDVLVNNAGV 116 (262)
T ss_dssp HSCCSEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 3578999887665
No 383
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=87.83 E-value=1.4 Score=39.08 Aligned_cols=56 Identities=20% Similarity=0.084 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHc----C--CCeEEEEecChhHHHHHHHHHHh
Q 025059 18 EFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETA----L--IANYIGIDVATSGIGEARDTWEN 76 (258)
Q Consensus 18 ~~~k~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~----~--~~~v~gvD~s~~~l~~a~~~~~~ 76 (258)
.|+...+.+.- ...|+|+|.|+|.++..+++. . ..+++.|++|+...+..++++..
T Consensus 127 ~~~~~~~~~~g---~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 127 RPVAQALDASG---TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp HHHHHHHHHHT---CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred HHHHHHHHhcC---CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 66665554432 479999999999988777543 1 34899999999999888887764
No 384
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=87.79 E-value=1.7 Score=37.18 Aligned_cols=97 Identities=11% Similarity=-0.003 Sum_probs=60.6
Q ss_pred cCCCCEEEEEcC-C-CCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh-cCCc
Q 025059 29 SHPYVTVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (258)
Q Consensus 29 ~~~~~~VLDlGc-G-~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~ 105 (258)
.+++.+||-.|+ | -|..+..+++....+++++|.+++.++.+++.-. . ..+ |..+..+...+.. ....
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa------~-~~~--~~~~~~~~~~~~~~~~~g 235 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGA------K-RGI--NYRSEDFAAVIKAETGQG 235 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC------S-EEE--ETTTSCHHHHHHHHHSSC
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC------C-EEE--eCCchHHHHHHHHHhCCC
Confidence 348899999953 3 3556666666544489999999998888765311 1 122 2222333222211 2457
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+|+|+...+- ..+....++|+++|.++..
T Consensus 236 ~Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 236 VDIILDMIGA-----------AYFERNIASLAKDGCLSII 264 (353)
T ss_dssp EEEEEESCCG-----------GGHHHHHHTEEEEEEEEEC
T ss_pred ceEEEECCCH-----------HHHHHHHHHhccCCEEEEE
Confidence 9999875532 1456677899999998875
No 385
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=87.64 E-value=8.5 Score=32.23 Aligned_cols=84 Identities=13% Similarity=0.012 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchh----hhhhhcC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE----TQMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~~~~ 103 (258)
.+.+||=.|++.|. .+..++..+. +|++++.++..++.+.+.+...+.+.++.++.+|+.+..-. .......
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 35688888877652 2233344465 89999999998888777766543333688999999774311 1112234
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 86 g~id~lv~nAg~ 97 (319)
T 3ioy_A 86 GPVSILCNNAGV 97 (319)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 688999887764
No 386
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=87.56 E-value=3.9 Score=30.09 Aligned_cols=101 Identities=7% Similarity=-0.066 Sum_probs=58.1
Q ss_pred CCEEEEEcCCCCccHHHHH----HcCCCeEEEEecCh-hHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 32 YVTVCDLYCGAGVDVDKWE----TALIANYIGIDVAT-SGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~~----~~~~~~v~gvD~s~-~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
..+|+=+|+|. ....++ ..+. .++.+|.++ +..+......+ . .+.++.+|..+....... .-...
T Consensus 3 ~~~vlI~G~G~--vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~-~----~~~~i~gd~~~~~~l~~a--~i~~a 72 (153)
T 1id1_A 3 KDHFIVCGHSI--LAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG-D----NADVIPGDSNDSSVLKKA--GIDRC 72 (153)
T ss_dssp CSCEEEECCSH--HHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC-T----TCEEEESCTTSHHHHHHH--TTTTC
T ss_pred CCcEEEECCCH--HHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhc-C----CCeEEEcCCCCHHHHHHc--ChhhC
Confidence 34677777753 333333 3344 899999974 44444333221 1 467889998664332111 23578
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
|+|++.. . .......+....+.+.|...++....+.
T Consensus 73 d~vi~~~------~-~d~~n~~~~~~a~~~~~~~~ii~~~~~~ 108 (153)
T 1id1_A 73 RAILALS------D-NDADNAFVVLSAKDMSSDVKTVLAVSDS 108 (153)
T ss_dssp SEEEECS------S-CHHHHHHHHHHHHHHTSSSCEEEECSSG
T ss_pred CEEEEec------C-ChHHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 8887653 1 2234556666777777877777655443
No 387
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=87.43 E-value=6 Score=31.88 Aligned_cols=83 Identities=19% Similarity=0.096 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-CCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhc
Q 025059 31 PYVTVCDLYC-GAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEK 102 (258)
Q Consensus 31 ~~~~VLDlGc-G~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~ 102 (258)
.+.+||=.|+ |.|. .+..++..+. +|+.+|.++..++.+.+.+.... ..++.++.+|+.+..-.. .....
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 3567888887 5542 2344444565 89999999988888777765432 227899999997743211 11122
Q ss_pred CCceeEEEecccc
Q 025059 103 ANQADLVCCFQHL 115 (258)
Q Consensus 103 ~~~fD~V~~~~~l 115 (258)
.+..|+++.+.+.
T Consensus 99 ~g~id~li~~Ag~ 111 (266)
T 3o38_A 99 AGRLDVLVNNAGL 111 (266)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCcEEEECCCc
Confidence 3578999887664
No 388
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=87.38 E-value=4.9 Score=28.56 Aligned_cols=97 Identities=10% Similarity=-0.017 Sum_probs=52.5
Q ss_pred CCEEEEEcCCC-CccH-HHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 32 YVTVCDLYCGA-GVDV-DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 32 ~~~VLDlGcG~-G~~~-~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
+.+|+=+|+|. |..+ ..+...+. +++++|.+++.++..++.. .+.++.+|..+...... .....+|+|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~-------~~~~~~~d~~~~~~l~~--~~~~~~d~v 73 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEI-------DALVINGDCTKIKTLED--AGIEDADMY 73 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-------SSEEEESCTTSHHHHHH--TTTTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhc-------CcEEEEcCCCCHHHHHH--cCcccCCEE
Confidence 46788888865 2222 22333354 8999999988766554321 34566777654322110 113468998
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
++.-. .. .....+..+.+.+.++ .++...
T Consensus 74 i~~~~------~~-~~~~~~~~~~~~~~~~-~ii~~~ 102 (140)
T 1lss_A 74 IAVTG------KE-EVNLMSSLLAKSYGIN-KTIARI 102 (140)
T ss_dssp EECCS------CH-HHHHHHHHHHHHTTCC-CEEEEC
T ss_pred EEeeC------Cc-hHHHHHHHHHHHcCCC-EEEEEe
Confidence 76532 12 2333455556667775 444443
No 389
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=87.03 E-value=1.7 Score=36.76 Aligned_cols=97 Identities=13% Similarity=0.072 Sum_probs=60.5
Q ss_pred cCCCCEEEEEcC-C-CCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 025059 29 SHPYVTVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (258)
Q Consensus 29 ~~~~~~VLDlGc-G-~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (258)
.+++.+||-.|+ | -|..+..+++....+++++|.+++.++.+++. + .. ..+ |..+..+...+.. ...
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----g--a~-~~~--~~~~~~~~~~~~~~~~~~ 216 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEY----G--AE-YLI--NASKEDILRQVLKFTNGK 216 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----T--CS-EEE--ETTTSCHHHHHHHHTTTS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----C--Cc-EEE--eCCCchHHHHHHHHhCCC
Confidence 458899999994 3 35555666665444999999999888877542 1 01 122 2222333222211 235
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+|+|+...+- ..+....++|++||.++..
T Consensus 217 g~D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 217 GVDASFDSVGK-----------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp CEEEEEECCGG-----------GGHHHHHHHEEEEEEEEEC
T ss_pred CceEEEECCCh-----------HHHHHHHHHhccCCEEEEE
Confidence 79999765432 2466677899999999875
No 390
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=86.82 E-value=4.3 Score=31.89 Aligned_cols=96 Identities=8% Similarity=0.009 Sum_probs=57.2
Q ss_pred EEEEEcCCCCccHHHHH----HcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 34 TVCDLYCGAGVDVDKWE----TALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 34 ~VLDlGcG~G~~~~~~~----~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
+|+=+|+|. ....++ ..+. .++.+|.+++.++...+.. ...++.+|..+....... .-..+|+|
T Consensus 2 ~iiIiG~G~--~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~-------~~~~i~gd~~~~~~l~~a--~i~~ad~v 69 (218)
T 3l4b_C 2 KVIIIGGET--TAYYLARSMLSRKY-GVVIINKDRELCEEFAKKL-------KATIIHGDGSHKEILRDA--EVSKNDVV 69 (218)
T ss_dssp CEEEECCHH--HHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHS-------SSEEEESCTTSHHHHHHH--TCCTTCEE
T ss_pred EEEEECCCH--HHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHc-------CCeEEEcCCCCHHHHHhc--CcccCCEE
Confidence 466677654 333333 3344 8999999998877654332 456889998764432211 24578988
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
++.. . .......+..+.+.+.|...++....+
T Consensus 70 i~~~------~-~d~~n~~~~~~a~~~~~~~~iia~~~~ 101 (218)
T 3l4b_C 70 VILT------P-RDEVNLFIAQLVMKDFGVKRVVSLVND 101 (218)
T ss_dssp EECC------S-CHHHHHHHHHHHHHTSCCCEEEECCCS
T ss_pred EEec------C-CcHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 7643 2 223445566666666677776655433
No 391
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=86.81 E-value=12 Score=30.84 Aligned_cols=110 Identities=8% Similarity=-0.070 Sum_probs=65.8
Q ss_pred CCEEEEEcCCC--Cc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh----hhhc
Q 025059 32 YVTVCDLYCGA--GV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEK 102 (258)
Q Consensus 32 ~~~VLDlGcG~--G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~ 102 (258)
+.+||=.|++. |. .+..++..+. +|+.+|.++...+.+.+.....+ .+.++.+|+.+..-... ....
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56888888753 31 3344444565 89999999876665555444332 46789999977432111 1112
Q ss_pred CCceeEEEeccccccc--------cCCHHHH-----------HHHHHHHHhcccCCcEEEEE
Q 025059 103 ANQADLVCCFQHLQMC--------FETEERA-----------RRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~--------~~~~~~~-----------~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+..|+++.+.+.... -.+.++. -.+++.+...++.+|.++.+
T Consensus 106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~i 167 (296)
T 3k31_A 106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTL 167 (296)
T ss_dssp HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 3678999887754320 1223332 23455667777788888776
No 392
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=86.71 E-value=1.3 Score=32.95 Aligned_cols=102 Identities=10% Similarity=0.069 Sum_probs=55.9
Q ss_pred CCCEEEEEcCCC-CccHHHHHH-cCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 31 PYVTVCDLYCGA-GVDVDKWET-ALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 31 ~~~~VLDlGcG~-G~~~~~~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
++.+|+=+|||. |..+...+. .+. +|+++|.+++.++.++. .. ....+.+|..+....... .-..+|+
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~---~~----g~~~~~~d~~~~~~l~~~--~~~~ad~ 87 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNS---EF----SGFTVVGDAAEFETLKEC--GMEKADM 87 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCT---TC----CSEEEESCTTSHHHHHTT--TGGGCSE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHh---cC----CCcEEEecCCCHHHHHHc--CcccCCE
Confidence 568999999875 433333333 354 89999999876544321 11 345666776442211100 1246898
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
|+.... +. .....+..+.+.+.+...++....+.
T Consensus 88 Vi~~~~------~~-~~~~~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 88 VFAFTN------DD-STNFFISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp EEECSS------CH-HHHHHHHHHHHHTSCCSEEEEECSSG
T ss_pred EEEEeC------Cc-HHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 876542 22 23344445555566666666654443
No 393
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=86.66 E-value=1.6 Score=37.25 Aligned_cols=94 Identities=20% Similarity=0.019 Sum_probs=58.8
Q ss_pred cCCCCEEEEEcC-C-CCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 025059 29 SHPYVTVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (258)
Q Consensus 29 ~~~~~~VLDlGc-G-~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~ 104 (258)
.+++.+||=+|+ | -|..+..+++....+++++ .+++.++.+++. .+..+. ....+...+.. ...
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~l--------Ga~~i~---~~~~~~~~~~~~~~~~ 215 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDL--------GATPID---ASREPEDYAAEHTAGQ 215 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHH--------TSEEEE---TTSCHHHHHHHHHTTS
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc--------CCCEec---cCCCHHHHHHHHhcCC
Confidence 348899999994 3 3666666666544489999 888887777543 122222 22223222211 235
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+|+|+...+ . ..+....++|+++|.++..
T Consensus 216 g~D~vid~~g------~-----~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 216 GFDLVYDTLG------G-----PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp CEEEEEESSC------T-----HHHHHHHHHEEEEEEEEES
T ss_pred CceEEEECCC------c-----HHHHHHHHHHhcCCeEEEE
Confidence 7999976442 1 3566777899999998865
No 394
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=86.62 E-value=3.2 Score=35.15 Aligned_cols=99 Identities=13% Similarity=0.052 Sum_probs=58.7
Q ss_pred hcCCCCEEEEEcCCCCc-cHHHHHH-cCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh--cC
Q 025059 28 YSHPYVTVCDLYCGAGV-DVDKWET-ALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KA 103 (258)
Q Consensus 28 ~~~~~~~VLDlGcG~G~-~~~~~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~ 103 (258)
...++.+||=+|+|.++ .+..+++ .+..+|+++|.+++-++.+++.-. . ..+ |-.+.++.+.+.. ..
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga------~-~~i--~~~~~~~~~~v~~~t~g 230 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGA------D-VTI--NSGDVNPVDEIKKITGG 230 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTC------S-EEE--EC-CCCHHHHHHHHTTS
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCC------e-EEE--eCCCCCHHHHhhhhcCC
Confidence 45689999999998753 3444444 355699999999988777654321 1 112 1112222222211 23
Q ss_pred CceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
..+|.++.... ....+....++|+++|.++..
T Consensus 231 ~g~d~~~~~~~----------~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 231 LGVQSAIVCAV----------ARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp SCEEEEEECCS----------CHHHHHHHHHTEEEEEEEEEC
T ss_pred CCceEEEEecc----------CcchhheeheeecCCceEEEE
Confidence 35666644321 124567778899999998876
No 395
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=86.53 E-value=0.62 Score=38.93 Aligned_cols=92 Identities=15% Similarity=0.046 Sum_probs=58.7
Q ss_pred cCCCCEEEEEcC-C-CCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCC-CchhhhhhhcCCc
Q 025059 29 SHPYVTVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQEKANQ 105 (258)
Q Consensus 29 ~~~~~~VLDlGc-G-~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~ 105 (258)
.+++.+||-+|+ | -|..+..+++....+++++|.+++.++.+++. +. . ..+ |..+ ..+.+. -..
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga--~-~~~--~~~~~~~~~~~----~~~ 189 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL----GA--E-EAA--TYAEVPERAKA----WGG 189 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT----TC--S-EEE--EGGGHHHHHHH----TTS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CC--C-EEE--ECCcchhHHHH----hcC
Confidence 678999999998 3 46666666665334999999999888877542 11 1 111 2111 112111 157
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+|+|+. .+- ..+....++|+++|.++..
T Consensus 190 ~d~vid-~g~-----------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 190 LDLVLE-VRG-----------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp EEEEEE-CSC-----------TTHHHHHTTEEEEEEEEEC
T ss_pred ceEEEE-CCH-----------HHHHHHHHhhccCCEEEEE
Confidence 999987 431 2456778899999998765
No 396
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=86.21 E-value=5.9 Score=32.74 Aligned_cols=109 Identities=13% Similarity=-0.025 Sum_probs=69.3
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (258)
.+..+|=-|.+.|. .+..++..+. +|+.+|.+++.++.+.+.+.. ++..+++|+.+..-.+ ......
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGG-----GAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCC-----CeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46788888887762 2344444565 999999999988877665522 5778899997743211 112235
Q ss_pred CceeEEEeccccccc----cCCHHHH-----------HHHHHHHHhcccCCcEEEEE
Q 025059 104 NQADLVCCFQHLQMC----FETEERA-----------RRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 104 ~~fD~V~~~~~l~~~----~~~~~~~-----------~~~l~~i~~~LkpgG~~i~~ 145 (258)
++.|+++.+.+.... -.+.++. -.+.+.+...|+.+|.++.+
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIni 158 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLT 158 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 789999887654221 0122222 34455677788888887766
No 397
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=85.85 E-value=1.3 Score=43.34 Aligned_cols=100 Identities=15% Similarity=0.142 Sum_probs=64.4
Q ss_pred cCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 29 ~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
...+.++||+|+|.-.=...+.- ....++.+|+-|-+ +... .+.....|++.|-....++ ....+|.
T Consensus 819 ~~~~~~~lDlGTGPE~RiLsLiP-~~~pvtm~D~RP~a-----e~~~--~w~~~T~f~~~DyL~~~~~-----~~~~~D~ 885 (1289)
T 1ej6_A 819 VYDGDVVLDLGTGPEAKILELIP-ATSPVTCVDIRPTA-----QPSG--CWNVRTTFLELDYLSDGWI-----TGVRGDI 885 (1289)
T ss_dssp CCTTCCEEEESCCSSCGGGGTSC-TTSCEEEEESSCCC-----SCST--TBSSCEEEEESCTTSSSCG-----GGCCCSE
T ss_pred ecccceEEEccCCCcceeeeecC-CCCceEEecccCch-----hhhc--cccccceeeEcccccccee-----ecCCCcE
Confidence 55678999999988642222211 23479999987654 1111 1233579999998776654 3568999
Q ss_pred EEeccccccccCCHH-HHHHHHHHHHhcccCCcE
Q 025059 109 VCCFQHLQMCFETEE-RARRLLQNVSSLLKPGGY 141 (258)
Q Consensus 109 V~~~~~l~~~~~~~~-~~~~~l~~i~~~LkpgG~ 141 (258)
|+|.+.+..++-... .+.+.++++.+..++.|.
T Consensus 886 vt~i~SLGAA~A~a~~tl~~~~~q~l~~~~~~~~ 919 (1289)
T 1ej6_A 886 VTCMLSLGAAAAGKSMTFDAAFQQLIKVLSKSTA 919 (1289)
T ss_dssp EEECSCHHHHHHHHTCCHHHHHHHHHHHHHTSCC
T ss_pred EEEEeechhhhhccCCcHHHHHHHHHHHHHhcCc
Confidence 999998875432221 356677777777776554
No 398
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=85.67 E-value=23 Score=33.09 Aligned_cols=116 Identities=13% Similarity=0.197 Sum_probs=69.7
Q ss_pred eeEEEEcCCCCC-chhhhhhh----cCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE-EcCc----hH
Q 025059 82 IAEFFEADPCAE-NFETQMQE----KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI-TPDS----ST 151 (258)
Q Consensus 82 ~~~~~~~d~~~~-~~~~~~~~----~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~-~~~~----~~ 151 (258)
+..++.+|+.+. .+...+.. .....-++++-.++.| .+.+...++++.+.+. ++|.+++. ..+. +.
T Consensus 189 ~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Y--l~~~~~~~ll~~~~~~--~~~~~~~~e~~~~~~~~d~ 264 (695)
T 2zwa_A 189 KYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAY--MKPERSDSIIEATSKM--ENSHFIILEQLIPKGPFEP 264 (695)
T ss_dssp SEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGG--SCHHHHHHHHHHHHTS--SSEEEEEEEECCTTCTTSH
T ss_pred CeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEE--cCHHHHHHHHHHHhhC--CCceEEEEEeecCCCCCCh
Confidence 568899999774 22222221 1234556777777877 5688899999999864 56666654 2222 22
Q ss_pred HHHHHHHhHHhhhcCCCCCCCCCCCCcccCeeEEEEecccCCCCCCceeceEEEEccCccCCCccccchHHHHHHHHHcC
Q 025059 152 IWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITFEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAG 231 (258)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~f~~~~~~~~~~g~~y~~~l~~~~~~~~e~lv~~~~l~~~~~~~G 231 (258)
..+.+.++... .+ . | +.. . ....+.+...+.+.++|
T Consensus 265 f~~~m~~~~~~---~g---------~------------------~---------l~~-~----~~~~~~~~~~~~~~~~G 300 (695)
T 2zwa_A 265 FSKQMLAHFKR---ND---------S------------------P---------LQS-V----LKYNTIESQVQRFNKLG 300 (695)
T ss_dssp HHHHHHHHHHH---TT---------C------------------C---------CCG-G----GTCCSHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH---cC---------C------------------C---------CCc-c----ccCCCHHHHHHHHHHCC
Confidence 33333222211 00 0 0 100 1 11346788888899999
Q ss_pred cEEEEeCChhHHHH
Q 025059 232 LEYVEIQNLNEFYD 245 (258)
Q Consensus 232 f~~~~~~~f~~~~~ 245 (258)
|+.+...++.++|+
T Consensus 301 w~~v~~~~~~~~y~ 314 (695)
T 2zwa_A 301 FAYVNVGDMFQLWE 314 (695)
T ss_dssp CCEEEEEEHHHHHH
T ss_pred CCCcceeeHHHHHh
Confidence 99999999999884
No 399
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=85.39 E-value=4.1 Score=33.09 Aligned_cols=84 Identities=15% Similarity=-0.018 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
.+.+||=-|++.|. .+..+++.+. +|+.+|.++..++.+.+.+.....+..+.++.+|+.+..-...+...-+..|
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 35678877766541 2333444455 8999999998888776666554333367889999876432222222346789
Q ss_pred EEEecccc
Q 025059 108 LVCCFQHL 115 (258)
Q Consensus 108 ~V~~~~~l 115 (258)
+++.+.+.
T Consensus 88 ~lv~nAg~ 95 (267)
T 3t4x_A 88 ILINNLGI 95 (267)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99887654
No 400
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=85.39 E-value=13 Score=29.81 Aligned_cols=111 Identities=9% Similarity=-0.094 Sum_probs=65.9
Q ss_pred CCCEEEEEcCC-CCccHH----HHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchh----hhhhh
Q 025059 31 PYVTVCDLYCG-AGVDVD----KWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE----TQMQE 101 (258)
Q Consensus 31 ~~~~VLDlGcG-~G~~~~----~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~~ 101 (258)
++.+||=.|++ +|+... .++..+. +|+.+|.+....+.+++.....+ .+.++.+|+.+..-. ..+..
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHHHH
Confidence 56889988875 233333 3344455 89999988766555544443332 477899999774321 11222
Q ss_pred cCCceeEEEeccccccc-------c--CCHHHHH-----------HHHHHHHhcccCCcEEEEE
Q 025059 102 KANQADLVCCFQHLQMC-------F--ETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 102 ~~~~fD~V~~~~~l~~~-------~--~~~~~~~-----------~~l~~i~~~LkpgG~~i~~ 145 (258)
..+..|+++.+.+.... . .+.++.. .+++.+...++++|.++.+
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 152 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTL 152 (271)
T ss_dssp HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEE
Confidence 34689999887655321 0 2233332 3445566677778887766
No 401
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=85.08 E-value=2.1 Score=36.81 Aligned_cols=96 Identities=21% Similarity=0.128 Sum_probs=57.7
Q ss_pred cC-CCCEEEEEcCCC-CccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 29 SH-PYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 29 ~~-~~~~VLDlGcG~-G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
.. ++.+||=+|+|. |..+.++++....+++++|.+++.++.+++.+.. . ..+ |..+.. .+....+.+
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa-----~-~v~--~~~~~~---~~~~~~~~~ 252 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGA-----D-SFL--VSRDQE---QMQAAAGTL 252 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCC-----S-EEE--ETTCHH---HHHHTTTCE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC-----c-eEE--eccCHH---HHHHhhCCC
Confidence 45 889999999764 5555566555334899999999887776533311 1 122 222211 111123479
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|+|+....... .+....++|+++|.++..
T Consensus 253 D~vid~~g~~~----------~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 253 DGIIDTVSAVH----------PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp EEEEECCSSCC----------CSHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCcHH----------HHHHHHHHHhcCCEEEEE
Confidence 99976543221 234556788999998765
No 402
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=85.03 E-value=14 Score=29.89 Aligned_cols=112 Identities=13% Similarity=-0.084 Sum_probs=65.0
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecC-hhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhc
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVA-TSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEK 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s-~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~ 102 (258)
.+.++|=-|++.|. .+..++..+. +|+.++.. ...++...+.+...+ .++.++.+|+.+..-.. .....
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45778888866552 2334444465 88887764 455555555554432 27889999997743211 11112
Q ss_pred CCceeEEEeccccccc----cCCHHHH-----------HHHHHHHHhcccCCcEEEEE
Q 025059 103 ANQADLVCCFQHLQMC----FETEERA-----------RRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~----~~~~~~~-----------~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+..|+++.+.+.... -.+.++. -.+.+.+...|+++|.++.+
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 151 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLT 151 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 3578999877654321 0123332 23455677778888888776
No 403
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=84.85 E-value=11 Score=29.98 Aligned_cols=111 Identities=9% Similarity=-0.028 Sum_probs=63.9
Q ss_pred CCCEEEEEcCCCCccHHHH----HH-cCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCch-hhh---hhh
Q 025059 31 PYVTVCDLYCGAGVDVDKW----ET-ALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF-ETQ---MQE 101 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~----~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~---~~~ 101 (258)
++.+||=.|+ +|+....+ +. .+. +|++++.++..++.+.+.+...+ .++.++.+|+.+..- ... +..
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~ 78 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRK 78 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHH
Confidence 3567776664 44444333 34 454 89999999887776666655432 267899999976431 111 111
Q ss_pred cCCceeEEEecccccccc---CC-HHHH-----------HHHHHHHHhcccCCcEEEEE
Q 025059 102 KANQADLVCCFQHLQMCF---ET-EERA-----------RRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 102 ~~~~fD~V~~~~~l~~~~---~~-~~~~-----------~~~l~~i~~~LkpgG~~i~~ 145 (258)
..+..|+|+...+..... .. .++. ..+++.+...++++|.++.+
T Consensus 79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 79 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 234799998766543110 11 1222 23455666677777877766
No 404
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=84.77 E-value=4.5 Score=33.07 Aligned_cols=82 Identities=11% Similarity=0.070 Sum_probs=56.7
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~ 103 (258)
++..+|=-|.+.|. .+..++..+. +|+.+|.+++.++.+.+.++..+ .++.++++|+.+..--+. ....-
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46778888877762 2344444565 89999999999998888776653 378899999987432111 12234
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
++.|+++.+.++
T Consensus 83 G~iDiLVNNAGi 94 (254)
T 4fn4_A 83 SRIDVLCNNAGI 94 (254)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 789999887654
No 405
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=84.69 E-value=8.9 Score=31.12 Aligned_cols=83 Identities=10% Similarity=-0.001 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecC------------hhHHHHHHHHHHhcCCCceeEEEEcCCCCCch
Q 025059 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVA------------TSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (258)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (258)
.+.+||=-|++.| ..+..+++.+. +|+.+|.+ ++.++...+.....+ .++.++.+|+.+..-
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--SRIVARQADVRDRES 88 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcC--CeEEEEeCCCCCHHH
Confidence 4678888887665 22344444465 89999987 566665555544432 278999999987432
Q ss_pred hhh----hhhcCCceeEEEeccccc
Q 025059 96 ETQ----MQEKANQADLVCCFQHLQ 116 (258)
Q Consensus 96 ~~~----~~~~~~~fD~V~~~~~l~ 116 (258)
... .....+..|+++.+.+..
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 111 111235789998877654
No 406
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=84.54 E-value=7.5 Score=32.09 Aligned_cols=112 Identities=13% Similarity=0.065 Sum_probs=65.1
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecCh--hHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhh
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVAT--SGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQE 101 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~--~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~ 101 (258)
.+.+||=.|++.|. .+..+++.+. +|+.+|.+. ...+.+.+.....+ .++.++.+|+.+..-.. ....
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35688888876552 2233444455 899888763 34444444444332 27888999997743211 1112
Q ss_pred cCCceeEEEecccccccc-----CCHHHH-----------HHHHHHHHhcccCCcEEEEE
Q 025059 102 KANQADLVCCFQHLQMCF-----ETEERA-----------RRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 102 ~~~~fD~V~~~~~l~~~~-----~~~~~~-----------~~~l~~i~~~LkpgG~~i~~ 145 (258)
..+..|+++.+.+..... .+.++. -.+++.+...++.+|.++.+
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 236789998876643211 123332 34556677788888988776
No 407
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=84.39 E-value=5.7 Score=31.94 Aligned_cols=81 Identities=9% Similarity=-0.085 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchh----hhhhhcC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE----TQMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~~~~ 103 (258)
.+.+||=.|++.|. .+..++..+. +|+.+|.++..++.+.+.+...+ .++.++.+|+.+..-. ......
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~- 81 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAH- 81 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence 45678888877652 2334444465 89999999998888777776542 3789999999774321 112223
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 82 g~id~lv~nAg~ 93 (252)
T 3h7a_A 82 APLEVTIFNVGA 93 (252)
T ss_dssp SCEEEEEECCCC
T ss_pred CCceEEEECCCc
Confidence 789999887664
No 408
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=83.83 E-value=2.6 Score=37.67 Aligned_cols=101 Identities=11% Similarity=0.060 Sum_probs=60.8
Q ss_pred CCEEEEEcCCC-CccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 32 YVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 32 ~~~VLDlGcG~-G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
.++|+=+|||. |..+...+......++.+|.+++.++.+.+++ .+..+++|..+....... .-...|+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~A--gi~~ad~~i 73 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEA--GAQDADMLV 73 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHH--TTTTCSEEE
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhc--CCCcCCEEE
Confidence 46788888875 32222222222238999999999988876664 567899999876543222 346789887
Q ss_pred eccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
+.- +.+...-+...+++.+.+.-..+...-+
T Consensus 74 a~t-------~~De~Nl~~~~~Ak~~~~~~~~iar~~~ 104 (461)
T 4g65_A 74 AVT-------NTDETNMAACQVAFTLFNTPNRIARIRS 104 (461)
T ss_dssp ECC-------SCHHHHHHHHHHHHHHHCCSSEEEECCC
T ss_pred EEc-------CChHHHHHHHHHHHHhcCCccceeEecc
Confidence 532 1233444555566666555555544333
No 409
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=83.78 E-value=13 Score=29.88 Aligned_cols=79 Identities=11% Similarity=-0.034 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 025059 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (258)
.+.+||=.|++.| ..+..+++.+. +|+.+|.++..++...+.+.. ++.++.+|+.+..-.. ......
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGP-----AAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCT-----TEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCC-----CceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 3567888886655 22334444465 899999998887766555421 5788999997743211 112234
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 81 g~id~lv~~Ag~ 92 (259)
T 4e6p_A 81 GGLDILVNNAAL 92 (259)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 689999887654
No 410
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=83.47 E-value=15 Score=29.99 Aligned_cols=79 Identities=11% Similarity=-0.010 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (258)
.+.+||=.|++.|. .+..+++.+. +|+.+|.+++.++.+.+.+ +.++.++.+|+.+..-.. ......
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence 45778888876652 2334444465 8999999988877766555 126788999997743211 111223
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 102 g~iD~lvnnAg~ 113 (277)
T 3gvc_A 102 GGVDKLVANAGV 113 (277)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578999887655
No 411
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=83.35 E-value=1.3 Score=37.16 Aligned_cols=90 Identities=11% Similarity=-0.016 Sum_probs=56.8
Q ss_pred EEEEEcC-C-CCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEEe
Q 025059 34 TVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (258)
Q Consensus 34 ~VLDlGc-G-~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~ 111 (258)
+||=.|+ | -|..+.++++....+++++|.+++.++.+++.-. ...+-..+... . ..+ ..+.+|+|+-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa------~~vi~~~~~~~--~-~~~--~~~~~d~v~d 217 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGA------NRILSRDEFAE--S-RPL--EKQLWAGAID 217 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTC------SEEEEGGGSSC--C-CSS--CCCCEEEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC------CEEEecCCHHH--H-Hhh--cCCCccEEEE
Confidence 4999987 3 4666777776644499999999999888865311 11121111111 1 001 2457998865
Q ss_pred ccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 112 FQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 112 ~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.- .. ..+....++|+++|.++..
T Consensus 218 ~~-------g~----~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 218 TV-------GD----KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp SS-------CH----HHHHHHHHTEEEEEEEEEC
T ss_pred CC-------Cc----HHHHHHHHHHhcCCEEEEE
Confidence 32 11 2678888999999999876
No 412
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=83.15 E-value=8.1 Score=31.39 Aligned_cols=112 Identities=11% Similarity=-0.006 Sum_probs=64.6
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEE-ecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhc
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGI-DVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEK 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gv-D~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~ 102 (258)
.+.++|=-|++.|. .+..++..+. +++.+ +.++..++...+.....+ .++.++.+|+.+..-.. .....
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAG--GKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56788888877652 2344445566 77776 445556666555554432 26888999997743211 11122
Q ss_pred CCceeEEEeccccccc----cCCHHHH-----------HHHHHHHHhcccCCcEEEEE
Q 025059 103 ANQADLVCCFQHLQMC----FETEERA-----------RRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~----~~~~~~~-----------~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+..|+++.+.+.... -.+.+.. -.+++.+...++++|.++.+
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 160 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINM 160 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEE
Confidence 3689999887654311 1122222 23455666777778888776
No 413
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=83.03 E-value=12 Score=30.61 Aligned_cols=82 Identities=7% Similarity=-0.020 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEec-ChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh----hhhc
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDV-ATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEK 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~ 102 (258)
.+.++|=-|++.|. .+..++..+. +|+.+|. +++.++...+.+...+ .++.++.+|+.+..-... ....
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLG--ARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTT--CCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 45778888876652 2334444455 8999996 6666666655555432 278899999987542111 1122
Q ss_pred CCceeEEEecccc
Q 025059 103 ANQADLVCCFQHL 115 (258)
Q Consensus 103 ~~~fD~V~~~~~l 115 (258)
.+..|+++.+.+.
T Consensus 105 ~g~iD~lvnnAg~ 117 (280)
T 4da9_A 105 FGRIDCLVNNAGI 117 (280)
T ss_dssp HSCCCEEEEECC-
T ss_pred cCCCCEEEECCCc
Confidence 3578999887655
No 414
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=82.87 E-value=13 Score=29.85 Aligned_cols=112 Identities=13% Similarity=-0.021 Sum_probs=65.4
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEE-ecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhc
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGI-DVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEK 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gv-D~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~ 102 (258)
.+.+||=-|++.|. .+..++..+. +|+.+ +.++...+.+.+.+...+ .++.++.+|+.+..-.. .....
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788888877652 2334444465 78777 777777776666655432 26889999997743211 11112
Q ss_pred CCceeEEEeccccccc-----cCCHHHH-----------HHHHHHHHhcccCCcEEEEE
Q 025059 103 ANQADLVCCFQHLQMC-----FETEERA-----------RRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~-----~~~~~~~-----------~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+..|+++.+.+.... -.+.+.. -.+.+.+...++++|.++..
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 142 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTF 142 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 3578999877643210 0122222 33455666777777877766
No 415
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=82.55 E-value=6.4 Score=31.41 Aligned_cols=82 Identities=7% Similarity=-0.070 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 025059 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~ 103 (258)
.+.+||=.|++.| ..+..+++.+. +|+.+|.+++.++.+.+.+...+ .++.++.+|+.+..-... .....
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4678888887655 23344444465 89999999998888777765542 278899999977432111 11123
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 85 g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 GGIDYLVNNAAI 96 (253)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 578999887654
No 416
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=82.47 E-value=10 Score=30.59 Aligned_cols=82 Identities=7% Similarity=-0.062 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (258)
.+.+||=.|++.|. .+..++..+. +|+.+|.+++.++.+.+.+...+ .++.++.+|+.+..-.. ......
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 36788888877662 2334444465 89999999988888777665542 27889999998743211 112234
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 87 g~id~lv~nAg~ 98 (264)
T 3ucx_A 87 GRVDVVINNAFR 98 (264)
T ss_dssp SCCSEEEECCCS
T ss_pred CCCcEEEECCCC
Confidence 689999877643
No 417
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=82.02 E-value=1.4 Score=37.86 Aligned_cols=95 Identities=21% Similarity=0.104 Sum_probs=57.2
Q ss_pred cC-CCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 29 SH-PYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 29 ~~-~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
.. ++.+||=+|+|. |..+.++++. +. +++++|.+++.++.+++.+.. . ..+..+ +.. .+....+.
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa-----~-~vi~~~--~~~---~~~~~~~g 244 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGA-----D-DYVIGS--DQA---KMSELADS 244 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCC-----S-CEEETT--CHH---HHHHSTTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCC-----c-eeeccc--cHH---HHHHhcCC
Confidence 45 889999999764 4555555554 54 899999998877766533211 1 112111 111 11112347
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+|+|+..-.-. ..+....++|++||.++..
T Consensus 245 ~D~vid~~g~~----------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 245 LDYVIDTVPVH----------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp EEEEEECCCSC----------CCSHHHHTTEEEEEEEEEC
T ss_pred CCEEEECCCCh----------HHHHHHHHHhccCCEEEEe
Confidence 99997654321 1245567899999999876
No 418
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=81.95 E-value=5.3 Score=37.48 Aligned_cols=123 Identities=13% Similarity=0.199 Sum_probs=65.7
Q ss_pred CCCEEEEEcCCCCccHHHHHHc-----------CC--CeEEEEec---ChhHHHHHHHHHH-----------hcC-----
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA-----------LI--ANYIGIDV---ATSGIGEARDTWE-----------NQR----- 78 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~-----------~~--~~v~gvD~---s~~~l~~a~~~~~-----------~~~----- 78 (258)
+..+|+|+|.|+|.+....... .. -+++.++. +.+.+..|-..++ ...
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 4579999999999776554332 11 26899998 4444443322211 110
Q ss_pred --------CCceeEEEEcCCCCCchhhhhhh-cCCceeEEEecc-ccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 79 --------KNFIAEFFEADPCAENFETQMQE-KANQADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 79 --------~~~~~~~~~~d~~~~~~~~~~~~-~~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
-...+++..+|+.+. .+.+.. ....+|.+..-. +... ...--...++..+.++++|||.+. +...
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~--l~~~~~~~~~~~da~flD~f~p~~--np~~w~~~~~~~l~~~~~~g~~~~-t~~~ 212 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTL--LPTLDDSLNNQVDAWFLDGFAPAK--NPDMWNEQLFNAMARMTRPGGTFS-TFTA 212 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHH--GGGCCGGGTTCEEEEEECSSCC----CCTTCSHHHHHHHHHHEEEEEEEE-ESCC
T ss_pred ceEEEecCCcEEEEEEccCHHHH--HhhcccccCCceeEEEECCCCCCC--ChhhhhHHHHHHHHHHhCCCCEEE-eccC
Confidence 012456677775321 111110 147899996532 1111 000012678899999999999864 3333
Q ss_pred chHHHHHHHH
Q 025059 149 SSTIWAKYQK 158 (258)
Q Consensus 149 ~~~~~~~~~~ 158 (258)
...+.+.+.+
T Consensus 213 ~~~vr~~l~~ 222 (689)
T 3pvc_A 213 AGFVRRGLQQ 222 (689)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHh
Confidence 4455444443
No 419
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=81.61 E-value=15 Score=29.55 Aligned_cols=84 Identities=7% Similarity=-0.159 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 025059 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (258)
.+.++|=-|++.| ..+..++..+. +|+.+|.++..++.+.+.+.....+.++.++.+|+.+..-.. ......
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4677888887765 22334444465 899999999888887776655222225889999997743211 111123
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 86 g~id~lvnnAg~ 97 (265)
T 3lf2_A 86 GCASILVNNAGQ 97 (265)
T ss_dssp CSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 678999887654
No 420
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=81.61 E-value=1.2 Score=43.86 Aligned_cols=54 Identities=19% Similarity=0.205 Sum_probs=42.2
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCC-CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCC
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADP 90 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~ 90 (258)
+..+++||-||.|++...+...++ ..+.++|+++.+++.-+.+++ ...++..|+
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p------~~~~~~~DI 593 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP------GSTVFTEDC 593 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT------TSEEECSCH
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC------CCccccccH
Confidence 457899999999999999988887 568899999999877665553 234566664
No 421
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=81.44 E-value=6.7 Score=32.51 Aligned_cols=82 Identities=12% Similarity=-0.002 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 025059 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~ 103 (258)
.+.+||=.|++.| ..+..++..+. +|+.+|.++..++.+.+.+...+ .++.++.+|+.+..-... .....
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 4578888887765 22334444465 89999999999888877776542 378899999977432111 11123
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 107 g~id~lvnnAg~ 118 (301)
T 3tjr_A 107 GGVDVVFSNAGI 118 (301)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 578999887654
No 422
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=81.10 E-value=20 Score=28.78 Aligned_cols=83 Identities=7% Similarity=-0.040 Sum_probs=49.6
Q ss_pred CCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCch-hhh---hhhcCC
Q 025059 32 YVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF-ETQ---MQEKAN 104 (258)
Q Consensus 32 ~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~---~~~~~~ 104 (258)
+.+||=.|++.| ..+..++..+. +|+.+|.++..++.+.+.+.....+.++.++.+|+.+..- ... .....+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 567888886554 12233344455 8999999987776655554332112267889999976431 111 111235
Q ss_pred ceeEEEecccc
Q 025059 105 QADLVCCFQHL 115 (258)
Q Consensus 105 ~fD~V~~~~~l 115 (258)
..|+++.+.+.
T Consensus 86 ~id~lv~~Ag~ 96 (267)
T 2gdz_A 86 RLDILVNNAGV 96 (267)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999887654
No 423
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=80.84 E-value=9.6 Score=30.21 Aligned_cols=81 Identities=6% Similarity=0.001 Sum_probs=53.0
Q ss_pred CCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchh----hhhhhcCC
Q 025059 32 YVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE----TQMQEKAN 104 (258)
Q Consensus 32 ~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~~~~~ 104 (258)
+.+||=.|++.| ..+..+++.+. +|+.++.++..++...+.+...+ .++.++.+|+.+..-. .......+
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 567777776554 12344444455 89999999988887777665543 3788999999774321 11222356
Q ss_pred ceeEEEecccc
Q 025059 105 QADLVCCFQHL 115 (258)
Q Consensus 105 ~fD~V~~~~~l 115 (258)
..|+++.+.+.
T Consensus 82 ~id~li~~Ag~ 92 (247)
T 3lyl_A 82 AIDILVNNAGI 92 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999887654
No 424
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=80.76 E-value=16 Score=29.68 Aligned_cols=82 Identities=12% Similarity=0.050 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecC----------------hhHHHHHHHHHHhcCCCceeEEEEcCCC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVA----------------TSGIGEARDTWENQRKNFIAEFFEADPC 91 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s----------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~ 91 (258)
.+.++|=-|++.|. .+..++..+. +|+.+|.+ ++.++...+..... +.++.++.+|+.
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~ 86 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAEVDVR 86 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTT
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEEcCCC
Confidence 36788888877652 2334444455 89999987 55666655555443 237889999997
Q ss_pred CCchhh----hhhhcCCceeEEEecccc
Q 025059 92 AENFET----QMQEKANQADLVCCFQHL 115 (258)
Q Consensus 92 ~~~~~~----~~~~~~~~fD~V~~~~~l 115 (258)
+..-.. ......+..|+++.+.+.
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 743211 111123578999887765
No 425
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=80.71 E-value=3.4 Score=38.66 Aligned_cols=123 Identities=14% Similarity=0.223 Sum_probs=66.4
Q ss_pred CCCEEEEEcCCCCccHHHHHHc-----------CC--CeEEEEec---ChhHHHHHHHHHHh-----------cCC----
Q 025059 31 PYVTVCDLYCGAGVDVDKWETA-----------LI--ANYIGIDV---ATSGIGEARDTWEN-----------QRK---- 79 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~-----------~~--~~v~gvD~---s~~~l~~a~~~~~~-----------~~~---- 79 (258)
+..+|||+|-|+|.+....... .. -++++++. +++.+..+-..++. ...
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 4468999999999776554332 11 15899998 77777644332111 100
Q ss_pred ---------CceeEEEEcCCCCCchhhhhhh-cCCceeEEEec-cccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcC
Q 025059 80 ---------NFIAEFFEADPCAENFETQMQE-KANQADLVCCF-QHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (258)
Q Consensus 80 ---------~~~~~~~~~d~~~~~~~~~~~~-~~~~fD~V~~~-~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~ 148 (258)
...+++..+|+.+. .+.+.. ....+|+|..- |+... .+.---..++..+.++++|||.+. +...
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~--l~~~~~~~~~~~d~~~~D~f~p~~--np~~w~~~~~~~l~~~~~~g~~~~-t~~~ 220 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINEL--TSQLDDSLNQKVDAWFLDGFAPAK--NPDMWTQNLFNAMARLARPGGTLA-TFTS 220 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHH--GGGBCGGGTTCEEEEEECCSCGGG--CGGGSCHHHHHHHHHHEEEEEEEE-ESCC
T ss_pred ceEEEecCCcEEEEEecCCHHHH--HHhcccccCCcccEEEECCCCCcC--ChhhhhHHHHHHHHHHhCCCCEEE-eccC
Confidence 12345566665221 111110 14689999652 21110 000113578899999999999864 3333
Q ss_pred chHHHHHHHH
Q 025059 149 SSTIWAKYQK 158 (258)
Q Consensus 149 ~~~~~~~~~~ 158 (258)
...+.+.+.+
T Consensus 221 ~~~vr~~L~~ 230 (676)
T 3ps9_A 221 AGFVRRGLQD 230 (676)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHh
Confidence 3444444443
No 426
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=80.59 E-value=6.1 Score=31.46 Aligned_cols=79 Identities=8% Similarity=-0.014 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCcee
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD 107 (258)
++.+||=.|++.|. .+..++..+. +|+.+|.++..++...+.+.. ++.+..+|+.+..-...+....+..|
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKD-----NYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCS-----SEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhcc-----CccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 56788888866551 2233444455 899999998888776655532 67888999876432222222345789
Q ss_pred EEEecccc
Q 025059 108 LVCCFQHL 115 (258)
Q Consensus 108 ~V~~~~~l 115 (258)
+++.+.+.
T Consensus 87 ~li~~Ag~ 94 (249)
T 3f9i_A 87 ILVCNAGI 94 (249)
T ss_dssp EEEECCC-
T ss_pred EEEECCCC
Confidence 99887654
No 427
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=80.57 E-value=4.7 Score=34.63 Aligned_cols=98 Identities=12% Similarity=-0.024 Sum_probs=57.8
Q ss_pred cCCCCEEEEEc-CC-CCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 29 SHPYVTVCDLY-CG-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 29 ~~~~~~VLDlG-cG-~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
..++.+||=.| +| -|..+.++++....++++++ +++.++.+++. +. . ..+ |..+..+.+.+.. ...+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~l----Ga--~-~v~--~~~~~~~~~~~~~-~~g~ 249 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKL----GA--D-DVI--DYKSGSVEEQLKS-LKPF 249 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHT----TC--S-EEE--ETTSSCHHHHHHT-SCCB
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHc----CC--C-EEE--ECCchHHHHHHhh-cCCC
Confidence 45789999999 44 35666666665334899998 67666666321 11 1 122 2222233222221 2579
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
|+|+..-+-. ...+....++|++||.++...
T Consensus 250 D~vid~~g~~---------~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 250 DFILDNVGGS---------TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp SEEEESSCTT---------HHHHGGGGBCSSSCCEEEESC
T ss_pred CEEEECCCCh---------hhhhHHHHHhhcCCcEEEEeC
Confidence 9997654211 124566778999999998763
No 428
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=80.54 E-value=22 Score=30.55 Aligned_cols=101 Identities=11% Similarity=-0.029 Sum_probs=67.6
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCc-eeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNF-IAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
++.+||.++.+-|.++..++..+ ++.+.-|-.+....+.++..++... .+.+...- + . ....+|+|
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~~---~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~--~-~-------~~~~~~~v 104 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEHK---PYSIGDSYISELATRENLRLNGIDESSVKFLDST--A-D-------YPQQPGVV 104 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGGC---CEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETT--S-C-------CCSSCSEE
T ss_pred CCCCEEEECCCCCHHHHhhccCC---ceEEEhHHHHHHHHHHHHHHcCCCccceEecccc--c-c-------cccCCCEE
Confidence 45689999999998877765443 3444335555555666666654422 24443221 1 1 35789999
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
+... -.+...+...+..+...|+||+.+++...+.
T Consensus 105 ~~~l-----pk~~~~l~~~L~~l~~~l~~~~~i~~~g~~~ 139 (375)
T 4dcm_A 105 LIKV-----PKTLALLEQQLRALRKVVTSDTRIIAGAKAR 139 (375)
T ss_dssp EEEC-----CSCHHHHHHHHHHHHTTCCTTSEEEEEEEGG
T ss_pred EEEc-----CCCHHHHHHHHHHHHhhCCCCCEEEEEeccc
Confidence 7643 3567788999999999999999998775554
No 429
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=80.16 E-value=7.1 Score=31.60 Aligned_cols=78 Identities=18% Similarity=0.113 Sum_probs=47.6
Q ss_pred CCEEEEEcCCC-Cc-cHHHHHHcCCCeEEEEecCh-------------------hHHHHHHHHHHhcCCCceeEEEEcCC
Q 025059 32 YVTVCDLYCGA-GV-DVDKWETALIANYIGIDVAT-------------------SGIGEARDTWENQRKNFIAEFFEADP 90 (258)
Q Consensus 32 ~~~VLDlGcG~-G~-~~~~~~~~~~~~v~gvD~s~-------------------~~l~~a~~~~~~~~~~~~~~~~~~d~ 90 (258)
+.+||=+|||. |. .+..++..+.++++.+|.+. .-.+.+.+++.......++..+..++
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 110 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 110 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 47899999984 33 23444455888999999887 55666667776543333455555554
Q ss_pred CCCchhhhhhhcCCceeEEEecc
Q 025059 91 CAENFETQMQEKANQADLVCCFQ 113 (258)
Q Consensus 91 ~~~~~~~~~~~~~~~fD~V~~~~ 113 (258)
....+.+.+ ..+|+|+...
T Consensus 111 ~~~~~~~~~----~~~DvVi~~~ 129 (249)
T 1jw9_B 111 DDAELAALI----AEHDLVLDCT 129 (249)
T ss_dssp CHHHHHHHH----HTSSEEEECC
T ss_pred CHhHHHHHH----hCCCEEEEeC
Confidence 322222112 3689998753
No 430
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=79.85 E-value=2.3 Score=36.07 Aligned_cols=64 Identities=14% Similarity=0.167 Sum_probs=41.4
Q ss_pred eeEEEEcCCCCCchhhhhhhcCCceeEEEeccccccc----cCC------HHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 82 IAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMC----FET------EERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 82 ~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~----~~~------~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
...++++|+.+ ....+ +++++|+|++.-..... ... ...+...+.++.++|+|||.+++...+.
T Consensus 14 ~~~ii~gD~~~--~l~~l--~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 14 NGSMYIGDSLE--LLESF--PEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp SEEEEESCHHH--HGGGS--CSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CceEEeCcHHH--HHhhC--CCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 46788888633 11112 46789999886322110 000 2356788999999999999999986654
No 431
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=79.76 E-value=13 Score=31.25 Aligned_cols=90 Identities=17% Similarity=0.111 Sum_probs=54.4
Q ss_pred CEEEEEcCCC-C-ccHHHHHHcCCC-eEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 33 VTVCDLYCGA-G-VDVDKWETALIA-NYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 33 ~~VLDlGcG~-G-~~~~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
.+|.=||+|. | .++..+...+.. +|+++|.+++.++.+.+. +. ... ...|..+.. -...|+|
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~----G~--~~~-~~~~~~~~~--------~~~aDvV 98 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GI--IDE-GTTSIAKVE--------DFSPDFV 98 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TS--CSE-EESCTTGGG--------GGCCSEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC----CC--cch-hcCCHHHHh--------hccCCEE
Confidence 6899999986 2 334445454543 899999999887776532 11 001 122221101 1357998
Q ss_pred EeccccccccCCHHHHHHHHHHHHhcccCCcEEEE
Q 025059 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLG 144 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~ 144 (258)
+..-. ......++.++...+++|.+++-
T Consensus 99 ilavp-------~~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 99 MLSSP-------VRTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp EECSC-------GGGHHHHHHHHHHHSCTTCEEEE
T ss_pred EEeCC-------HHHHHHHHHHHhhccCCCcEEEE
Confidence 76532 22356778889999999876643
No 432
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=79.54 E-value=18 Score=29.72 Aligned_cols=82 Identities=13% Similarity=-0.037 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecC------------hhHHHHHHHHHHhcCCCceeEEEEcCCCCCch
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVA------------TSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (258)
.+.++|=-|++.|. .+..++..+. +|+.+|.+ ++.++.+.+.+...+ .++.++.+|+.+..-
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--RRIIASQVDVRDFDA 103 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcC--CceEEEECCCCCHHH
Confidence 35788888877652 2334444455 89999987 566666555554432 378899999977432
Q ss_pred hhh----hhhcCCceeEEEecccc
Q 025059 96 ETQ----MQEKANQADLVCCFQHL 115 (258)
Q Consensus 96 ~~~----~~~~~~~fD~V~~~~~l 115 (258)
... .....+..|+++.+.+.
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCC
Confidence 111 11123678999887654
No 433
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=79.10 E-value=18 Score=29.56 Aligned_cols=82 Identities=16% Similarity=0.070 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchh----hhhhhcC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE----TQMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~~~~ 103 (258)
++.+||=.|++.|. .+..++..+. +|+.+|.++..++.+.+.+... +.++.++.+|+.+..-. .......
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 46788888876652 2233444455 8999999998888777766543 23788999999774311 1111223
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 104 g~iD~lVnnAg~ 115 (283)
T 3v8b_A 104 GHLDIVVANAGI 115 (283)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 679999887664
No 434
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=78.97 E-value=5.7 Score=32.44 Aligned_cols=82 Identities=15% Similarity=0.050 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchh----hhhhhcC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE----TQMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~~~~ 103 (258)
.+.++|=-|.+.|. .+..+++.+. +|+.+|.+++.++.+.+.+...+ .++..+++|+.+..-. .......
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 46777777776652 2344444565 89999999999988877776653 3788899999774321 1122346
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
++.|+++.+.+.
T Consensus 85 G~iDiLVNNAG~ 96 (255)
T 4g81_D 85 IHVDILINNAGI 96 (255)
T ss_dssp CCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 789999887654
No 435
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=78.45 E-value=18 Score=28.92 Aligned_cols=82 Identities=10% Similarity=-0.006 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (258)
.+.++|=-|++.|. .+..+++.+. +|+.+|.++..++.+.+.+...+ .++.++.+|+.+..-.. ......
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46778888876652 2333444466 89999999988887776665542 27889999997743211 111123
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 88 g~id~lv~nAg~ 99 (256)
T 3gaf_A 88 GKITVLVNNAGG 99 (256)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578999887654
No 436
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=78.13 E-value=12 Score=31.35 Aligned_cols=98 Identities=8% Similarity=-0.113 Sum_probs=61.6
Q ss_pred CCEEEEEcCCCCccHHHHHHc---CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 32 YVTVCDLYCGAGVDVDKWETA---LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..+|+=+|+| .....+++. ... ++.+|.+++.++ +++ . .+.++.+|..+....... .-..+|.
T Consensus 115 ~~~viI~G~G--~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~----~----~~~~i~gd~~~~~~L~~a--~i~~a~~ 180 (336)
T 1lnq_A 115 SRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKK-VLR----S----GANFVHGDPTRVSDLEKA--NVRGARA 180 (336)
T ss_dssp -CEEEEESCC--HHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH----T----TCEEEESCTTSHHHHHHT--CSTTEEE
T ss_pred cCCEEEECCc--HHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh----C----CcEEEEeCCCCHHHHHhc--ChhhccE
Confidence 3578888775 444554443 223 999999998887 543 2 568899998765432221 3467898
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCch
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~~ 150 (258)
|++.. . .+..........+.+.|...++....+..
T Consensus 181 vi~~~------~-~d~~n~~~~~~ar~~~~~~~iiar~~~~~ 215 (336)
T 1lnq_A 181 VIVDL------E-SDSETIHCILGIRKIDESVRIIAEAERYE 215 (336)
T ss_dssp EEECC------S-SHHHHHHHHHHHHTTCTTSEEEEECSSGG
T ss_pred EEEcC------C-ccHHHHHHHHHHHHHCCCCeEEEEECCHH
Confidence 87643 2 22344555566777888878777755543
No 437
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=78.01 E-value=5.9 Score=35.08 Aligned_cols=99 Identities=14% Similarity=0.069 Sum_probs=59.8
Q ss_pred cCCCCEEEEEcC-C-CCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCC-------------
Q 025059 29 SHPYVTVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE------------- 93 (258)
Q Consensus 29 ~~~~~~VLDlGc-G-~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~------------- 93 (258)
.+++.+||=+|+ | -|..+..+++....++++++.+++-++.+++.-. . ..+...-.+.
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa------~-~vi~~~~~d~~~~~~~~~~~~~~ 298 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGA------E-AIIDRNAEGYRFWKDENTQDPKE 298 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC------C-EEEETTTTTCCSEEETTEECHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC------c-EEEecCcCcccccccccccchHH
Confidence 458899999997 4 3666666666644589999999888888754311 1 1121111100
Q ss_pred --chhhhhhh--cCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 94 --NFETQMQE--KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 94 --~~~~~~~~--~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+...+.. ....+|+|+..-+ . ..+....++|++||.++..
T Consensus 299 ~~~~~~~i~~~t~g~g~Dvvid~~G-------~----~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 299 WKRFGKRIRELTGGEDIDIVFEHPG-------R----ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHHHTSCCEEEEEECSC-------H----HHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHHHHHhCCCCCcEEEEcCC-------c----hhHHHHHHHhhCCcEEEEE
Confidence 00011111 2358999976432 1 3567777899999999875
No 438
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=77.90 E-value=10 Score=30.54 Aligned_cols=84 Identities=14% Similarity=0.041 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCch-hhhh---hhcC
Q 025059 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF-ETQM---QEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~---~~~~ 103 (258)
.+.+||=.|++.| ..+..++..+. +|+.+|.+++.++.+.+.+.....+.++.++.+|+.+..- ...+ ....
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3567888886655 22233444455 8999999988877666555432112268889999977431 1111 1123
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 91 g~id~lv~nAg~ 102 (267)
T 1iy8_A 91 GRIDGFFNNAGI 102 (267)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 578999887654
No 439
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=77.75 E-value=11 Score=30.15 Aligned_cols=84 Identities=11% Similarity=-0.001 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCC-ceeEEEEcCCCCCchhh----hhhhc
Q 025059 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKN-FIAEFFEADPCAENFET----QMQEK 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~----~~~~~ 102 (258)
.+.++|=-|++.| ..+..++..+. +|+.+|.++..++.+.+.+...... .++.++.+|+.+..-.. .....
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 3567888887665 22334444466 8999999998888877766543211 36889999997743211 11122
Q ss_pred CCceeEEEecccc
Q 025059 103 ANQADLVCCFQHL 115 (258)
Q Consensus 103 ~~~fD~V~~~~~l 115 (258)
.+..|+++.+.+.
T Consensus 85 ~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 85 YGAVDILVNAAAM 97 (250)
T ss_dssp HCCEEEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 3689999887765
No 440
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=77.65 E-value=8.9 Score=32.01 Aligned_cols=92 Identities=11% Similarity=-0.018 Sum_probs=55.7
Q ss_pred cCCCCEEEEEc-CCC-CccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCc-hhhhhhhcCCc
Q 025059 29 SHPYVTVCDLY-CGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAEN-FETQMQEKANQ 105 (258)
Q Consensus 29 ~~~~~~VLDlG-cG~-G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~ 105 (258)
.+++.+||=+| +|. |..+..+++....++++++ ++..++.+++. +. . ..+ |..+.. +.. .-..
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~l----Ga--~-~~i--~~~~~~~~~~----~~~g 215 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKAL----GA--E-QCI--NYHEEDFLLA----ISTP 215 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHH----TC--S-EEE--ETTTSCHHHH----CCSC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHc----CC--C-EEE--eCCCcchhhh----hccC
Confidence 45899999996 554 6666777666444899887 55546655442 11 1 122 222222 221 2257
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+|+|+..-+ . ..+....++|+++|.++..
T Consensus 216 ~D~v~d~~g-------~----~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 216 VDAVIDLVG-------G----DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEEESSC-------H----HHHHHHGGGEEEEEEEEEC
T ss_pred CCEEEECCC-------c----HHHHHHHHhccCCCEEEEe
Confidence 999976432 1 1236788999999999876
No 441
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=77.51 E-value=26 Score=28.33 Aligned_cols=84 Identities=11% Similarity=-0.091 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCC-CceeEEEEcCCCCCchhh----hhhhc
Q 025059 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRK-NFIAEFFEADPCAENFET----QMQEK 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-~~~~~~~~~d~~~~~~~~----~~~~~ 102 (258)
.+.+||=-|++.| ..+..++..+. +|+.+|.++..++.+.+.+...+. ..++.++.+|+.+..-.. .....
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 3678888887655 22334444465 899999999888887777654321 226889999997743211 11112
Q ss_pred CCceeEEEecccc
Q 025059 103 ANQADLVCCFQHL 115 (258)
Q Consensus 103 ~~~fD~V~~~~~l 115 (258)
.+..|+++.+.+.
T Consensus 89 ~g~id~lv~nAg~ 101 (281)
T 3svt_A 89 HGRLHGVVHCAGG 101 (281)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 3578999887664
No 442
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=77.49 E-value=8.7 Score=30.86 Aligned_cols=81 Identities=7% Similarity=-0.149 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCCCccHHHH----HHcCCCeEEEEec-ChhHHHHHHHHHHhcCCCceeEEEEcCCCCCch-hhhh---hh
Q 025059 31 PYVTVCDLYCGAGVDVDKW----ETALIANYIGIDV-ATSGIGEARDTWENQRKNFIAEFFEADPCAENF-ETQM---QE 101 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~----~~~~~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~---~~ 101 (258)
.+.+||=.|++ |+....+ +..+. ++++++. ++..++...+.+...+ .++.++.+|+.+..- ...+ ..
T Consensus 20 ~~k~vlItGas-ggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 20 AGKVALTTGAG-RGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVS 95 (274)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35678877654 4444443 33454 8999998 7776666555554332 267889999976432 1111 11
Q ss_pred cCCceeEEEecccc
Q 025059 102 KANQADLVCCFQHL 115 (258)
Q Consensus 102 ~~~~fD~V~~~~~l 115 (258)
..+..|+|+...+.
T Consensus 96 ~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 96 HFGGLDFVMSNSGM 109 (274)
T ss_dssp HHSCEEEEECCCCC
T ss_pred HcCCCCEEEECCCC
Confidence 23478999876543
No 443
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=77.06 E-value=1.8 Score=41.41 Aligned_cols=54 Identities=15% Similarity=0.127 Sum_probs=41.0
Q ss_pred CCCEEEEEcCCCCccHHHHHHcC------CCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCC
Q 025059 31 PYVTVCDLYCGAGVDVDKWETAL------IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADP 90 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~ 90 (258)
+..+||||-||.|+++.-+...+ +.-+.++|+++.+++.-+.+++ ...+.+.|+
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp------~~~~~~~di 270 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP------QTEVRNEKA 270 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT------TSEEEESCH
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC------CCceecCcH
Confidence 34789999999999998886654 4467899999999887766654 234556665
No 444
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=77.05 E-value=10 Score=30.80 Aligned_cols=81 Identities=7% Similarity=-0.115 Sum_probs=52.5
Q ss_pred CCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhcCC
Q 025059 32 YVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKAN 104 (258)
Q Consensus 32 ~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~~ 104 (258)
+.+||=.|++.|. .+..++..+. +|+.+|.++..++.+.+.+...+ .++.++.+|+.+..-.. ......+
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4577777766552 2233444465 89999999988888777766542 27888999997743211 1111235
Q ss_pred ceeEEEecccc
Q 025059 105 QADLVCCFQHL 115 (258)
Q Consensus 105 ~fD~V~~~~~l 115 (258)
..|+++.+.+.
T Consensus 81 ~iD~lVnnAG~ 91 (264)
T 3tfo_A 81 RIDVLVNNAGV 91 (264)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999887654
No 445
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=76.89 E-value=14 Score=30.62 Aligned_cols=91 Identities=18% Similarity=0.108 Sum_probs=54.9
Q ss_pred CCEEEEEcCCCC--ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEE
Q 025059 32 YVTVCDLYCGAG--VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (258)
Q Consensus 32 ~~~VLDlGcG~G--~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V 109 (258)
..+|.=||+|.= ..+..+...+. +|+++|.+++.++.+.+. + ......+..+ --...|+|
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~----g----~~~~~~~~~e---------~~~~aDvv 68 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAE----G----ACGAAASARE---------FAGVVDAL 68 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT----T----CSEEESSSTT---------TTTTCSEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHc----C----CccccCCHHH---------HHhcCCEE
Confidence 357888998862 23344445565 899999999887766542 1 1111233221 12457998
Q ss_pred EeccccccccCCHHHHHHHH---HHHHhcccCCcEEEEEE
Q 025059 110 CCFQHLQMCFETEERARRLL---QNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~~l---~~i~~~LkpgG~~i~~~ 146 (258)
+..- .+....+..+ +.+...+++|.+++-..
T Consensus 69 i~~v------p~~~~~~~v~~~~~~l~~~l~~g~ivv~~s 102 (303)
T 3g0o_A 69 VILV------VNAAQVRQVLFGEDGVAHLMKPGSAVMVSS 102 (303)
T ss_dssp EECC------SSHHHHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred EEEC------CCHHHHHHHHhChhhHHhhCCCCCEEEecC
Confidence 7643 3344456665 66778888888776543
No 446
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=76.87 E-value=11 Score=30.71 Aligned_cols=82 Identities=10% Similarity=-0.033 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (258)
.+.+||=-|++.|. .+..++..+. +|+.+|.++..++.+.+.+...+ .++.++.+|+.+..-.. ......
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788888876652 2334444465 89999999988888777665542 37889999997743111 111123
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 100 g~id~lv~nAg~ 111 (279)
T 3sju_A 100 GPIGILVNSAGR 111 (279)
T ss_dssp CSCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 578999887654
No 447
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=76.85 E-value=1.8 Score=36.45 Aligned_cols=97 Identities=14% Similarity=-0.062 Sum_probs=56.0
Q ss_pred cCCCC-EEEEEcC-C-CCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 025059 29 SHPYV-TVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (258)
Q Consensus 29 ~~~~~-~VLDlGc-G-~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 105 (258)
..++. +||-+|+ | -|..+.++++....++++++.+++.++.+++. +. ...+-..+....... .. ..+.
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~l----Ga--~~~i~~~~~~~~~~~-~~--~~~~ 216 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL----GA--KEVLAREDVMAERIR-PL--DKQR 216 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT----TC--SEEEECC----------C--CSCC
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc----CC--cEEEecCCcHHHHHH-Hh--cCCc
Confidence 45665 8999997 3 46666666665334899999998888877542 11 111111111000010 11 2347
Q ss_pred eeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 106 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
+|+|+...+- ..+....++|++||.++..
T Consensus 217 ~d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 217 WAAAVDPVGG-----------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp EEEEEECSTT-----------TTHHHHHHTEEEEEEEEEC
T ss_pred ccEEEECCcH-----------HHHHHHHHhhccCCEEEEE
Confidence 9998764421 1356677899999998875
No 448
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=76.76 E-value=27 Score=27.96 Aligned_cols=113 Identities=11% Similarity=-0.008 Sum_probs=68.8
Q ss_pred CCCEEEEEcCCC--C---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchh----hhhhh
Q 025059 31 PYVTVCDLYCGA--G---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE----TQMQE 101 (258)
Q Consensus 31 ~~~~VLDlGcG~--G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~~ 101 (258)
.+.++|=-|++. | ..+..+++.+. +|+.+|.+++.++.+.+..+..+ +.++.++++|+.+..-. +....
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 467788888543 4 23344555565 89999999999888877766543 22678899999774311 11122
Q ss_pred cCCceeEEEeccccccc--------cCCHHHHH-----------HHHHHHHhcccCCcEEEEE
Q 025059 102 KANQADLVCCFQHLQMC--------FETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 102 ~~~~fD~V~~~~~l~~~--------~~~~~~~~-----------~~l~~i~~~LkpgG~~i~~ 145 (258)
..+..|+++.+.+.... -.+.++.. ...+.....++.+|.++.+
T Consensus 83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVni 145 (256)
T 4fs3_A 83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVAT 145 (256)
T ss_dssp HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEE
T ss_pred HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEE
Confidence 34789998876543210 01222222 2234456778889988766
No 449
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=76.68 E-value=8.8 Score=32.86 Aligned_cols=96 Identities=11% Similarity=0.016 Sum_probs=57.4
Q ss_pred CCCCEEEEEcCC--CCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhh-cCCce
Q 025059 30 HPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQA 106 (258)
Q Consensus 30 ~~~~~VLDlGcG--~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~f 106 (258)
.++.+||=+|++ -|..+.++++....+++++. +++-++.+++. + -...+.. .+..+.+.+.. ..+.+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~l----G---a~~vi~~--~~~~~~~~v~~~t~g~~ 232 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSR----G---AEEVFDY--RAPNLAQTIRTYTKNNL 232 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHT----T---CSEEEET--TSTTHHHHHHHHTTTCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHc----C---CcEEEEC--CCchHHHHHHHHccCCc
Confidence 678999999984 47777777776444888885 88777766542 1 1122222 22223222211 23459
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcc-cCCcEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLL-KPGGYFLGI 145 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~L-kpgG~~i~~ 145 (258)
|+|+-.-+ . ...+..+.++| ++||.++..
T Consensus 233 d~v~d~~g------~----~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 233 RYALDCIT------N----VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp CEEEESSC------S----HHHHHHHHHHSCTTCEEEEES
T ss_pred cEEEECCC------c----hHHHHHHHHHhhcCCCEEEEE
Confidence 99976432 1 13455666677 699998765
No 450
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=76.65 E-value=26 Score=28.30 Aligned_cols=82 Identities=13% Similarity=0.003 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEec-------------ChhHHHHHHHHHHhcCCCceeEEEEcCCCCCc
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDV-------------ATSGIGEARDTWENQRKNFIAEFFEADPCAEN 94 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~-------------s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~ 94 (258)
.+.+||=.|++.|. .+..++..+. +|+.+|. +++.++.+.+.....+ .++.++.+|+.+..
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~ 90 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQG--RKALTRVLDVRDDA 90 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTCHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHH
Confidence 46788888877652 2334444465 8999998 5667776666555442 37889999997743
Q ss_pred hhhh----hhhcCCceeEEEecccc
Q 025059 95 FETQ----MQEKANQADLVCCFQHL 115 (258)
Q Consensus 95 ~~~~----~~~~~~~fD~V~~~~~l 115 (258)
-... .....+..|+++.+.+.
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 2111 11123578999887654
No 451
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=76.60 E-value=1 Score=37.60 Aligned_cols=47 Identities=15% Similarity=0.143 Sum_probs=34.1
Q ss_pred CCceeEEEecccccc-----c--cCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 103 ANQADLVCCFQHLQM-----C--FETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~-----~--~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
.+++|+|++..+..+ . .++...+..++.-...+|+|||.|++-....
T Consensus 204 ~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygg 257 (320)
T 2hwk_A 204 VPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGY 257 (320)
T ss_dssp SCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCC
T ss_pred cCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecC
Confidence 377999999765432 2 2333445567888999999999999986665
No 452
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=76.33 E-value=21 Score=28.67 Aligned_cols=111 Identities=10% Similarity=0.037 Sum_probs=63.3
Q ss_pred CCCEEEEEcCCCCccHHHHH----HcCCCeEEEEecChh---HHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh----h
Q 025059 31 PYVTVCDLYCGAGVDVDKWE----TALIANYIGIDVATS---GIGEARDTWENQRKNFIAEFFEADPCAENFETQ----M 99 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~----~~~~~~v~gvD~s~~---~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~ 99 (258)
.+.+||=-|++.| ....++ ..+. +|+.++.+.. .++.+.+.+... +.++.++.+|+.+..-... .
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~ 85 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLFDFA 85 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence 4678888887665 333333 3344 8888876543 444444444433 2378999999977432111 1
Q ss_pred hhcCCceeEEEeccccccc----cCCHHHH-----------HHHHHHHHhcccCCcEEEEE
Q 025059 100 QEKANQADLVCCFQHLQMC----FETEERA-----------RRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 100 ~~~~~~fD~V~~~~~l~~~----~~~~~~~-----------~~~l~~i~~~LkpgG~~i~~ 145 (258)
....+..|+++.+.+.... -.+.++. -.+.+.+...|+++|.++.+
T Consensus 86 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 146 (262)
T 3ksu_A 86 EKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI 146 (262)
T ss_dssp HHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence 1123679999887654211 0123332 23445566677778887766
No 453
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=76.23 E-value=9.3 Score=31.18 Aligned_cols=82 Identities=10% Similarity=-0.033 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~ 103 (258)
.+.+||=.|++.|. .+..+++.+. +|+.+|.+++.++...+.+...+ .++.++.+|+.+..-... .....
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46788888876652 2334444455 89999999988887777665543 267889999977432111 11123
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 108 g~iD~lvnnAg~ 119 (276)
T 3r1i_A 108 GGIDIAVCNAGI 119 (276)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 579999887654
No 454
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=76.20 E-value=15 Score=30.21 Aligned_cols=84 Identities=13% Similarity=-0.013 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCCCccHHH----HHHcCC--CeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh----hh
Q 025059 31 PYVTVCDLYCGAGVDVDK----WETALI--ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQ 100 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~----~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~ 100 (258)
.+.+||=.|++.| .... ++..+. ..|+.++.+.+.++.+.+.+.....+.++.++.+|+.+..-... ..
T Consensus 32 ~~k~~lVTGas~G-IG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 32 AKKTVLITGASAG-IGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred CCCEEEEecCCCh-HHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 3678888887665 3333 333333 38999999999888877766543223378899999987542211 11
Q ss_pred hcCCceeEEEecccc
Q 025059 101 EKANQADLVCCFQHL 115 (258)
Q Consensus 101 ~~~~~fD~V~~~~~l 115 (258)
...+..|+++.+.+.
T Consensus 111 ~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 111 QEFKDIDILVNNAGK 125 (287)
T ss_dssp GGGCSCCEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 223579999887664
No 455
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=75.83 E-value=22 Score=28.98 Aligned_cols=83 Identities=10% Similarity=-0.055 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (258)
.+.+||=.|++.|. .+..++..+. +|+.+|.++..++.+.+.+..... ..+.++.+|+.+..-.. ......
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVCDVGDPDQVAALFAAVRAEF 109 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46778877766541 2233344455 899999999888777666543321 13588999997743211 111223
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 110 g~iD~lvnnAG~ 121 (281)
T 4dry_A 110 ARLDLLVNNAGS 121 (281)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 678999887654
No 456
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=75.80 E-value=30 Score=27.98 Aligned_cols=111 Identities=13% Similarity=-0.023 Sum_probs=61.7
Q ss_pred CCCEEEEEcCCCCccHHHH----HHcCCCeEEEEecChhH-HHHHHHHHHhcCCCceeEEEEcCCCCCchhhh----hhh
Q 025059 31 PYVTVCDLYCGAGVDVDKW----ETALIANYIGIDVATSG-IGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQE 101 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~----~~~~~~~v~gvD~s~~~-l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~ 101 (258)
.+.+||=.|++.| ....+ +..+. +|+.++.++.. .+.+.+.+...+ .++.++.+|+.+..-... ...
T Consensus 28 ~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 28 EGKVALVTGAGRG-IGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 3567887776554 33333 33455 89999987643 444434443322 267889999876431111 111
Q ss_pred cCCceeEEEecccccccc----CCHHHHH-----------HHHHHHHhcccCCcEEEEE
Q 025059 102 KANQADLVCCFQHLQMCF----ETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 102 ~~~~fD~V~~~~~l~~~~----~~~~~~~-----------~~l~~i~~~LkpgG~~i~~ 145 (258)
..+..|+++.+.+....- .+.++.. .+++.+...|+.+|.++.+
T Consensus 104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 162 (283)
T 1g0o_A 104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 162 (283)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 235789998876543210 1233332 2345566666777888766
No 457
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=75.71 E-value=20 Score=28.90 Aligned_cols=81 Identities=6% Similarity=-0.080 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCCCccHHH----HHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCch-hhhh---hhc
Q 025059 31 PYVTVCDLYCGAGVDVDK----WETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF-ETQM---QEK 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~----~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~---~~~ 102 (258)
.+.+||=.|++.| .... ++..+. +|+.+|.++...+...+.....+ .++.++.+|+.+..- ...+ ...
T Consensus 33 ~~k~vlITGasgg-IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 108 (279)
T 3ctm_A 33 KGKVASVTGSSGG-IGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYG--VHSKAYKCNISDPKSVEETISQQEKD 108 (279)
T ss_dssp TTCEEEETTTTSS-HHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHC--SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcceEEEeecCCHHHHHHHHHHHHHH
Confidence 3567887776554 3333 344465 89999988766655544443322 267889999976431 1111 112
Q ss_pred CCceeEEEecccc
Q 025059 103 ANQADLVCCFQHL 115 (258)
Q Consensus 103 ~~~fD~V~~~~~l 115 (258)
.+..|+|+.+.+.
T Consensus 109 ~g~id~li~~Ag~ 121 (279)
T 3ctm_A 109 FGTIDVFVANAGV 121 (279)
T ss_dssp HSCCSEEEECGGG
T ss_pred hCCCCEEEECCcc
Confidence 2568999887654
No 458
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=75.64 E-value=25 Score=27.41 Aligned_cols=83 Identities=7% Similarity=-0.039 Sum_probs=50.5
Q ss_pred CCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh----hhhcCC
Q 025059 32 YVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKAN 104 (258)
Q Consensus 32 ~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~~ 104 (258)
+.+||=.|++.| ..+..++..+. +|+.++.+++.++.+.+.+.... +.++.++.+|+.+..-... .....+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 456777776554 12333444465 89999999888877666554211 2278899999977432111 111225
Q ss_pred ceeEEEeccccc
Q 025059 105 QADLVCCFQHLQ 116 (258)
Q Consensus 105 ~fD~V~~~~~l~ 116 (258)
..|+++.+.+..
T Consensus 80 ~id~li~~Ag~~ 91 (235)
T 3l77_A 80 DVDVVVANAGLG 91 (235)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCccc
Confidence 789998876653
No 459
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=75.62 E-value=15 Score=29.77 Aligned_cols=82 Identities=13% Similarity=0.028 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 025059 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (258)
.+.+||=-|++.| ..+..++..+. +|+.+|.++..++.+.+.+...+ .++.++.+|+.+..-.. ......
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVG--HDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 4678887776654 12333444465 89999999988887777665543 26888999997743211 112234
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 102 g~iD~lv~nAg~ 113 (271)
T 4ibo_A 102 IDVDILVNNAGI 113 (271)
T ss_dssp CCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 679999887654
No 460
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=75.31 E-value=18 Score=29.15 Aligned_cols=81 Identities=10% Similarity=-0.006 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCCCccHHHH----HHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCch-hhh---hhhc
Q 025059 31 PYVTVCDLYCGAGVDVDKW----ETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF-ETQ---MQEK 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~----~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~---~~~~ 102 (258)
.+.+||=.|++.| ....+ +..+. +|+++|.++..++...+.+...+ .++.++.+|+.+..- ... +...
T Consensus 30 ~~k~vlITGasgg-IG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 30 TGEIVLITGAGHG-IGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAE 105 (272)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 4577888876544 44433 33455 89999999888777666555432 268899999976431 111 1122
Q ss_pred CCceeEEEecccc
Q 025059 103 ANQADLVCCFQHL 115 (258)
Q Consensus 103 ~~~fD~V~~~~~l 115 (258)
.+..|+|+.+.+.
T Consensus 106 ~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 106 IGDVSILVNNAGV 118 (272)
T ss_dssp TCCCSEEEECCCC
T ss_pred CCCCcEEEECCCc
Confidence 4578999887654
No 461
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=75.18 E-value=12 Score=29.55 Aligned_cols=97 Identities=9% Similarity=-0.097 Sum_probs=59.1
Q ss_pred CCEEEEEcCCCCccHHHHHHc---CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeE
Q 025059 32 YVTVCDLYCGAGVDVDKWETA---LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~ 108 (258)
..+|+=+|+| .....+++. ... ++++|.+++.++.++ . .+.++.+|..+....... .-...|.
T Consensus 9 ~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~~~l~~a--~i~~ad~ 74 (234)
T 2aef_A 9 SRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S----GANFVHGDPTRVSDLEKA--NVRGARA 74 (234)
T ss_dssp -CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T----TCEEEESCTTCHHHHHHT--TCTTCSE
T ss_pred CCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c----CCeEEEcCCCCHHHHHhc--CcchhcE
Confidence 4678888875 444444443 223 999999988776554 1 467889998764332111 2357888
Q ss_pred EEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEEcCc
Q 025059 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (258)
Q Consensus 109 V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~~~~ 149 (258)
|++.. .+ ......+....+.+.|+..++....+.
T Consensus 75 vi~~~------~~-d~~n~~~~~~a~~~~~~~~iia~~~~~ 108 (234)
T 2aef_A 75 VIVDL------ES-DSETIHCILGIRKIDESVRIIAEAERY 108 (234)
T ss_dssp EEECC------SC-HHHHHHHHHHHHHHCSSSEEEEECSSG
T ss_pred EEEcC------CC-cHHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 87643 12 234445555666778887777765544
No 462
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=75.07 E-value=7.2 Score=32.96 Aligned_cols=95 Identities=8% Similarity=-0.019 Sum_probs=59.1
Q ss_pred CEEEEEcCCC--CccHHHHHHcCCCeEEEEecChhHHHHHHHHHHh-------cCC--C--------ceeEEEEcCCCCC
Q 025059 33 VTVCDLYCGA--GVDVDKWETALIANYIGIDVATSGIGEARDTWEN-------QRK--N--------FIAEFFEADPCAE 93 (258)
Q Consensus 33 ~~VLDlGcG~--G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-------~~~--~--------~~~~~~~~d~~~~ 93 (258)
.+|-=||+|+ +..+..++..+. +|++.|.+++.++.+.++... .+. + .++.+ ..|
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~---- 80 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTN---- 80 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECC----
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCC----
Confidence 4688889886 344555556676 899999999999888765321 110 0 01121 111
Q ss_pred chhhhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEE
Q 025059 94 NFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (258)
Q Consensus 94 ~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i 143 (258)
+.+ --...|+|+..- .+.......++.++...++|+.+++
T Consensus 81 -~~e----av~~aDlVieav-----pe~~~~k~~v~~~l~~~~~~~~Ii~ 120 (319)
T 2dpo_A 81 -LAE----AVEGVVHIQECV-----PENLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp -HHH----HTTTEEEEEECC-----CSCHHHHHHHHHHHHTTCCSSSEEE
T ss_pred -HHH----HHhcCCEEEEec-----cCCHHHHHHHHHHHHhhCCCCeEEE
Confidence 111 125689986542 2445556788899999999988654
No 463
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=74.84 E-value=24 Score=28.33 Aligned_cols=78 Identities=17% Similarity=0.077 Sum_probs=47.7
Q ss_pred CCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhcCC
Q 025059 32 YVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKAN 104 (258)
Q Consensus 32 ~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~~ 104 (258)
+.+||=.|++.| ..+..++..+. +|+.+|.+++.++.+.+.+. .++.++.+|+.+..-.. ......+
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALE-----AEAIAVVADVSDPKAVEAVFAEALEEFG 79 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCC-----SSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc-----CceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 567887776554 12233344455 89999999877665544332 26788999997643111 1111235
Q ss_pred ceeEEEecccc
Q 025059 105 QADLVCCFQHL 115 (258)
Q Consensus 105 ~fD~V~~~~~l 115 (258)
..|+++.+.+.
T Consensus 80 ~iD~lvnnAg~ 90 (263)
T 2a4k_A 80 RLHGVAHFAGV 90 (263)
T ss_dssp CCCEEEEGGGG
T ss_pred CCcEEEECCCC
Confidence 78999887654
No 464
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=74.77 E-value=25 Score=27.96 Aligned_cols=78 Identities=14% Similarity=-0.040 Sum_probs=47.1
Q ss_pred CCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCch-hhhh---hhcCC
Q 025059 32 YVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF-ETQM---QEKAN 104 (258)
Q Consensus 32 ~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~---~~~~~ 104 (258)
+.+||=.|++.| ..+..++..+. +|+.+|.+++.++...+.+ +.++.++.+|+.+..- ...+ ....+
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREEFG 78 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 567888886554 12233344455 8999999987766554433 1267889999876431 1111 11235
Q ss_pred ceeEEEecccc
Q 025059 105 QADLVCCFQHL 115 (258)
Q Consensus 105 ~fD~V~~~~~l 115 (258)
..|+++.+.+.
T Consensus 79 ~iD~lv~nAg~ 89 (254)
T 1hdc_A 79 SVDGLVNNAGI 89 (254)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999887654
No 465
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=74.53 E-value=2.6 Score=37.06 Aligned_cols=45 Identities=9% Similarity=0.042 Sum_probs=36.0
Q ss_pred CCEEEEEcCCCCccHHHHHHcC--CCe----EEEEecChhHHHHHHHHHHh
Q 025059 32 YVTVCDLYCGAGVDVDKWETAL--IAN----YIGIDVATSGIGEARDTWEN 76 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~~~~~--~~~----v~gvD~s~~~l~~a~~~~~~ 76 (258)
..+|||+.||.|+....+...+ ..- +.++|+++.+++.-+..+..
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 3689999999999998887766 334 88899999998877666643
No 466
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=74.42 E-value=20 Score=29.08 Aligned_cols=81 Identities=7% Similarity=-0.084 Sum_probs=51.0
Q ss_pred CCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhcCC
Q 025059 32 YVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKAN 104 (258)
Q Consensus 32 ~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~~ 104 (258)
+.+||=.|++.| ..+..++..+. +|+.+|.++..++.+.+.+...+ .++.++.+|+.+..-.. ......+
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 567888887654 12233344455 89999999888776666554432 26788999997643111 1112346
Q ss_pred ceeEEEecccc
Q 025059 105 QADLVCCFQHL 115 (258)
Q Consensus 105 ~fD~V~~~~~l 115 (258)
..|+++.+.+.
T Consensus 99 ~iD~lv~~Ag~ 109 (277)
T 2rhc_B 99 PVDVLVNNAGR 109 (277)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999887654
No 467
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=74.30 E-value=32 Score=27.65 Aligned_cols=82 Identities=10% Similarity=-0.045 Sum_probs=50.7
Q ss_pred CCEEEEEcCCCCccHHHH----HHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCch-hhh---hhhcC
Q 025059 32 YVTVCDLYCGAGVDVDKW----ETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF-ETQ---MQEKA 103 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~----~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~---~~~~~ 103 (258)
+.+||=.|++.| ....+ +..+. +|++++.++..++...+.+...+...++.++.+|+.+..- ... +....
T Consensus 32 ~k~vlVTGasgg-IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 32 DRLALVTGASGG-IGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 567888876544 33333 33455 8999999988777766655544322367889999976431 111 11123
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+|+...+.
T Consensus 110 g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 110 SGVDICINNAGL 121 (279)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578999877654
No 468
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=74.26 E-value=7.1 Score=33.07 Aligned_cols=96 Identities=8% Similarity=-0.023 Sum_probs=61.5
Q ss_pred CCEEEEEcCCCC--ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhc-------C-CCc---------eeEEEEcCCCC
Q 025059 32 YVTVCDLYCGAG--VDVDKWETALIANYIGIDVATSGIGEARDTWENQ-------R-KNF---------IAEFFEADPCA 92 (258)
Q Consensus 32 ~~~VLDlGcG~G--~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~-------~-~~~---------~~~~~~~d~~~ 92 (258)
..+|-=||+|+= +.+..++..+. .|+..|++++.++.+.++.... + ... ++.+ ..|
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~--- 80 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTN--- 80 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECC---
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccc---
Confidence 457999999962 34455555677 8999999999998887765431 1 000 0111 111
Q ss_pred CchhhhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEE
Q 025059 93 ENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (258)
Q Consensus 93 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i 143 (258)
+.+ .-...|+|+ -.+++..+-...+++++.++++|+.++.
T Consensus 81 --l~~----a~~~ad~Vi-----Eav~E~l~iK~~lf~~l~~~~~~~aIla 120 (319)
T 3ado_A 81 --LAE----AVEGVVHIQ-----ECVPENLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp --HHH----HTTTEEEEE-----ECCCSCHHHHHHHHHHHHTTCCSSSEEE
T ss_pred --hHh----HhccCcEEe-----eccccHHHHHHHHHHHHHHHhhhcceee
Confidence 111 124567763 2356888989999999999999987653
No 469
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=74.24 E-value=11 Score=30.92 Aligned_cols=78 Identities=15% Similarity=-0.080 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCCCccHH----HHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCce
Q 025059 31 PYVTVCDLYCGAGVDVD----KWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~----~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f 106 (258)
.+.+||=-|++.| ... .++..+. +|+.+|.++..++.+.+.+ +.++.++.+|+.+..-...+...-+..
T Consensus 15 ~gk~vlVTGas~g-IG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~~i 87 (291)
T 3rd5_A 15 AQRTVVITGANSG-LGAVTARELARRGA-TVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGVSGA 87 (291)
T ss_dssp TTCEEEEECCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTCCCE
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhcCCC
Confidence 4678888886654 333 3344455 8999999988776655443 237899999997743222222223578
Q ss_pred eEEEecccc
Q 025059 107 DLVCCFQHL 115 (258)
Q Consensus 107 D~V~~~~~l 115 (258)
|+++.+.+.
T Consensus 88 D~lv~nAg~ 96 (291)
T 3rd5_A 88 DVLINNAGI 96 (291)
T ss_dssp EEEEECCCC
T ss_pred CEEEECCcC
Confidence 999887654
No 470
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=74.13 E-value=9.8 Score=30.55 Aligned_cols=81 Identities=12% Similarity=-0.044 Sum_probs=51.9
Q ss_pred CCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhcCC
Q 025059 32 YVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKAN 104 (258)
Q Consensus 32 ~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~~ 104 (258)
+.+||=.|++.|. .+..+++.+. +|+.+|.++..++.+.+.+...+ .++.++.+|+.+..-.. ......+
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFP--GQILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCST--TCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5677777765541 2333444455 89999999998888777665432 37889999997743211 1112235
Q ss_pred ceeEEEecccc
Q 025059 105 QADLVCCFQHL 115 (258)
Q Consensus 105 ~fD~V~~~~~l 115 (258)
..|+++.+.+.
T Consensus 83 ~id~lv~nAg~ 93 (257)
T 3imf_A 83 RIDILINNAAG 93 (257)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999887653
No 471
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=73.86 E-value=20 Score=29.57 Aligned_cols=83 Identities=10% Similarity=-0.049 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchh----hhhhhcC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE----TQMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~~~~ 103 (258)
.+.+||=.|++.|. .+..++..+. +|+.+|.++..++.+.+.+...+. .++.++.+|+.+..-. .......
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGA-GNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSS-SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCC-CcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 45678877765541 2333444465 899999999888877776654321 2688999999774311 1111234
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 118 g~iD~lvnnAg~ 129 (293)
T 3rih_A 118 GALDVVCANAGI 129 (293)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 678999887654
No 472
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=73.68 E-value=26 Score=28.39 Aligned_cols=79 Identities=11% Similarity=-0.100 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 025059 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~ 103 (258)
.+.+||=.|++.| ..+..++..+. +|+.+|.+++.++.+.+.+. .++.++.+|+.+..-... .....
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 100 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIG-----DDALCVPTDVTDPDSVRALFTATVEKF 100 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHT-----SCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhC-----CCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3567777776554 12233444465 89999999888777665553 167899999977432111 11123
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 101 g~iD~lVnnAg~ 112 (272)
T 4dyv_A 101 GRVDVLFNNAGT 112 (272)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 579999887765
No 473
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=73.27 E-value=15 Score=29.93 Aligned_cols=81 Identities=11% Similarity=-0.042 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~ 103 (258)
.+.+||=-|++.|. .+..++..+. +|+.+|.++..++.+.+.+...+ .++.++.+|+.+..-... ....
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~- 107 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASG--GTAQELAGDLSEAGAGTDLIERAEAI- 107 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTT--CCEEEEECCTTSTTHHHHHHHHHHHH-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHh-
Confidence 46788877766552 2233444455 89999999888877776665442 278899999977542211 1122
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 108 g~iD~lvnnAg~ 119 (275)
T 4imr_A 108 APVDILVINASA 119 (275)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 689999887654
No 474
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=73.09 E-value=1.1 Score=44.25 Aligned_cols=110 Identities=9% Similarity=0.011 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCce-eEEEEcCCCCCch
Q 025059 17 YEFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFI-AEFFEADPCAENF 95 (258)
Q Consensus 17 ~~~~k~~li~~~~~~~~~VLDlGcG~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~-~~~~~~d~~~~~~ 95 (258)
.|++...++..+. +..+||+|+|.-.=...+.- ....++.+|+-|-+.. . ..+... ..|+++|-....+
T Consensus 815 Yn~~~~s~~~~~~--~~~~lDLGTGPEcRiLsliP-~~~pvtmvD~RP~ae~-----~--~~w~~~~T~yi~~DYl~~~~ 884 (1299)
T 3iyl_W 815 YNSFISEQTRNPN--LAHLLDLGTGPECRILSLIP-PTLQVTMSDSRPCAEL-----M--ASFDPALTAYVQGDYSTAAF 884 (1299)
T ss_dssp TTTHHHHHHTCGG--GCSEEEETCCSSCSGGGSSC-TTSCEEEEESSCCSSC-----G--GGBCTTTEEEEESCSSSGGG
T ss_pred hhheehhcccCCC--CCEEEEcCCCccceeeecCC-CCCceEEEecCCcccc-----c--cccccccceeEEecccccee
Confidence 3665544433333 37899999988632222111 2247999998665411 1 112224 6899999877665
Q ss_pred hhhhhhcCCceeEEEeccccccccCCH-HHHHHHHHHHHhcccCCcE
Q 025059 96 ETQMQEKANQADLVCCFQHLQMCFETE-ERARRLLQNVSSLLKPGGY 141 (258)
Q Consensus 96 ~~~~~~~~~~fD~V~~~~~l~~~~~~~-~~~~~~l~~i~~~LkpgG~ 141 (258)
+ ....+|.|+|.+.+..++-.. -.+.+.++++.+..++.|.
T Consensus 885 ~-----~~~~~d~vtailSLGAA~a~a~~tl~~~l~~~l~~~~~~~v 926 (1299)
T 3iyl_W 885 W-----NGIRCDSATAIFTIGAAAAAAGTDLIAFVQQLIPRIVAAGG 926 (1299)
T ss_dssp G-----SSCCCSEEEETTTHHHHHHHTTCCHHHHHHHHHHHHHHTTC
T ss_pred E-----ecCCCCEEEEeeechhhhhhCCCcHHHHHHHHHHHHHhcCc
Confidence 4 467899999999886432211 2367777777777777665
No 475
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=72.66 E-value=22 Score=28.63 Aligned_cols=82 Identities=9% Similarity=-0.096 Sum_probs=48.5
Q ss_pred CCEEEEEcCCCCccHHH----HHHcCCCeEEEEecChhHHHHHHHHHHh-cCCCceeEEEEcCCCCCchh-hhh---hhc
Q 025059 32 YVTVCDLYCGAGVDVDK----WETALIANYIGIDVATSGIGEARDTWEN-QRKNFIAEFFEADPCAENFE-TQM---QEK 102 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~----~~~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~~~~~~d~~~~~~~-~~~---~~~ 102 (258)
+.+||=.|++.| .... ++..+. +|+.+|.++..++.+.+.+.. ...+.++.++.+|+.+..-. ..+ ...
T Consensus 6 ~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 6 EKVAIITGSSNG-IGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 456777776544 3333 344455 899999998887766555521 11122678899999764311 111 112
Q ss_pred CCceeEEEecccc
Q 025059 103 ANQADLVCCFQHL 115 (258)
Q Consensus 103 ~~~fD~V~~~~~l 115 (258)
.+..|+++.+.+.
T Consensus 84 ~g~id~lv~~Ag~ 96 (278)
T 1spx_A 84 FGKLDILVNNAGA 96 (278)
T ss_dssp HSCCCEEEECCC-
T ss_pred cCCCCEEEECCCC
Confidence 3578999887654
No 476
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=72.55 E-value=1.8 Score=36.54 Aligned_cols=96 Identities=10% Similarity=-0.052 Sum_probs=56.6
Q ss_pred cCCCC-EEEEEcC-C-CCccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCC
Q 025059 29 SHPYV-TVCDLYC-G-AGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (258)
Q Consensus 29 ~~~~~-~VLDlGc-G-~G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 104 (258)
..++. +||=.|+ | -|..+.++++. +. ++++++.+++.++.+++.- . ...+-..+....... .. ...
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lG--a----~~v~~~~~~~~~~~~-~~--~~~ 216 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLG--A----SEVISREDVYDGTLK-AL--SKQ 216 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHT--C----SEEEEHHHHCSSCCC-SS--CCC
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcC--C----cEEEECCCchHHHHH-Hh--hcC
Confidence 45665 8999997 3 35555666555 54 7999999988888776421 1 111111110000010 00 234
Q ss_pred ceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 105 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+|+|+...+ . ..+....++|++||.++..
T Consensus 217 ~~d~vid~~g------~-----~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 217 QWQGAVDPVG------G-----KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp CEEEEEESCC------T-----HHHHHHHTTEEEEEEEEEC
T ss_pred CccEEEECCc------H-----HHHHHHHHhhcCCCEEEEE
Confidence 6999876432 1 2467788899999998865
No 477
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=72.47 E-value=35 Score=27.21 Aligned_cols=81 Identities=9% Similarity=-0.026 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCCCccHH----HHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchh----hhhhhc
Q 025059 31 PYVTVCDLYCGAGVDVD----KWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE----TQMQEK 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~----~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~~~ 102 (258)
.+.+||=.|++.| ... .++..+. +|+.+|.++..++.+.+.+...+ .++.++.+|+.+..-. ......
T Consensus 6 ~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 6 NGKVCLVTGAGGN-IGLATALRLAEEGT-AIALLDMNREALEKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3567887776654 333 3344455 89999999888777666554432 2688899999764311 111112
Q ss_pred CCceeEEEecccc
Q 025059 103 ANQADLVCCFQHL 115 (258)
Q Consensus 103 ~~~fD~V~~~~~l 115 (258)
.+..|+++.+.+.
T Consensus 82 ~g~id~lv~nAg~ 94 (262)
T 1zem_A 82 FGKIDFLFNNAGY 94 (262)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCCEEEECCCC
Confidence 3578999887654
No 478
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=71.95 E-value=21 Score=28.55 Aligned_cols=81 Identities=9% Similarity=0.016 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCCCccHH----HHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCch-hhhh---hhc
Q 025059 31 PYVTVCDLYCGAGVDVD----KWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF-ETQM---QEK 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~----~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~---~~~ 102 (258)
.+.+||=.|++.| ... .++..+. +|+.+|.++..++.+.+.+...+ .++.++.+|+.+..- ...+ ...
T Consensus 8 ~~k~vlVTGas~g-iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 8 EGCTALVTGGSRG-IGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKG--FKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3567887776554 333 3344455 89999999888776665554432 268889999977431 1111 112
Q ss_pred C-CceeEEEecccc
Q 025059 103 A-NQADLVCCFQHL 115 (258)
Q Consensus 103 ~-~~fD~V~~~~~l 115 (258)
. +..|+++.+.+.
T Consensus 84 ~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 84 FHGKLNILVNNAGI 97 (260)
T ss_dssp TTTCCCEEEECCCC
T ss_pred cCCCCCEEEECCCC
Confidence 2 679999887654
No 479
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=71.93 E-value=19 Score=29.04 Aligned_cols=81 Identities=9% Similarity=-0.037 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCCCccHH----HHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh-h---hhc
Q 025059 31 PYVTVCDLYCGAGVDVD----KWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ-M---QEK 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~----~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~---~~~ 102 (258)
.+.+||=.|++.| ... .+++.+. +|+.+|.++..++.+.+.+...+ .++.++.+|+.+..-... + ...
T Consensus 20 ~~k~vlVTGas~g-IG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 20 KGTTALVTGGSKG-IGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCcch-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHH
Confidence 4678888886654 333 3344455 89999999888777666554432 267889999976432111 1 112
Q ss_pred C-CceeEEEecccc
Q 025059 103 A-NQADLVCCFQHL 115 (258)
Q Consensus 103 ~-~~fD~V~~~~~l 115 (258)
. +..|+++.+.+.
T Consensus 96 ~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 96 FDGKLNILVNNAGV 109 (273)
T ss_dssp TTSCCCEEEECCCC
T ss_pred cCCCCcEEEECCCC
Confidence 2 689999887654
No 480
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=71.77 E-value=22 Score=29.12 Aligned_cols=81 Identities=10% Similarity=-0.019 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCCCccHHH----HHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchh-h---hhhhc
Q 025059 31 PYVTVCDLYCGAGVDVDK----WETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE-T---QMQEK 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~----~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~---~~~~~ 102 (258)
.+.+||=.|++.| .... ++..+. +|+.+|.++..++.+.+.+...+ .++.++.+|+.+..-. . .....
T Consensus 33 ~~k~vlVTGas~g-IG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 108 (291)
T 3cxt_A 33 KGKIALVTGASYG-IGFAIASAYAKAGA-TIVFNDINQELVDRGMAAYKAAG--INAHGYVCDVTDEDGIQAMVAQIESE 108 (291)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4678888886654 3333 334455 89999999887776665554432 2678899999774311 1 11123
Q ss_pred CCceeEEEecccc
Q 025059 103 ANQADLVCCFQHL 115 (258)
Q Consensus 103 ~~~fD~V~~~~~l 115 (258)
.+..|+++.+.+.
T Consensus 109 ~g~iD~lvnnAg~ 121 (291)
T 3cxt_A 109 VGIIDILVNNAGI 121 (291)
T ss_dssp TCCCCEEEECCCC
T ss_pred cCCCcEEEECCCc
Confidence 4679999887654
No 481
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=71.62 E-value=20 Score=28.40 Aligned_cols=81 Identities=7% Similarity=-0.086 Sum_probs=50.9
Q ss_pred CCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh-h---hhhcCC
Q 025059 32 YVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET-Q---MQEKAN 104 (258)
Q Consensus 32 ~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~---~~~~~~ 104 (258)
+.++|=.|++.| ..+..++..+. +|+.+|.+++.++.+.+.+...+ .++.++.+|+.+..-.. . .....+
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAG--AKVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 567888886654 12233344455 89999999888877666655432 26888999997743211 1 111235
Q ss_pred ceeEEEecccc
Q 025059 105 QADLVCCFQHL 115 (258)
Q Consensus 105 ~fD~V~~~~~l 115 (258)
..|+++.+.+.
T Consensus 84 ~id~lv~nAg~ 94 (247)
T 2jah_A 84 GLDILVNNAGI 94 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999887654
No 482
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=71.57 E-value=23 Score=28.44 Aligned_cols=108 Identities=12% Similarity=0.011 Sum_probs=60.9
Q ss_pred CCEEEEEcC-CCCccHHHHHH----cCCCeEEEEecChhH-HHHHHHHHHhcCCCceeEEEEcCCCCCchhh-hh---hh
Q 025059 32 YVTVCDLYC-GAGVDVDKWET----ALIANYIGIDVATSG-IGEARDTWENQRKNFIAEFFEADPCAENFET-QM---QE 101 (258)
Q Consensus 32 ~~~VLDlGc-G~G~~~~~~~~----~~~~~v~gvD~s~~~-l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~---~~ 101 (258)
+.+||=.|+ |+|+....++. .+. +|+.+|.++.. ++...+.. +.++.++.+|+.+..-.. .+ ..
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRL-----PAKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTS-----SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhc-----CCCceEEEccCCCHHHHHHHHHHHHH
Confidence 567888887 35555444433 354 89999988754 33332221 125778899997743111 11 11
Q ss_pred cCC---ceeEEEecccccc---------ccCCHHHHH-----------HHHHHHHhcccCCcEEEEE
Q 025059 102 KAN---QADLVCCFQHLQM---------CFETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 102 ~~~---~fD~V~~~~~l~~---------~~~~~~~~~-----------~~l~~i~~~LkpgG~~i~~ 145 (258)
..+ ..|+++.+.+... .-.+.++.. .+.+.+...|+++|.++.+
T Consensus 81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 147 (269)
T 2h7i_A 81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGM 147 (269)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEE
Confidence 123 7999988765432 011233332 3445666677777887766
No 483
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=71.54 E-value=16 Score=29.38 Aligned_cols=83 Identities=13% Similarity=-0.031 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 025059 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~ 103 (258)
.+.+||=-|++.| ..+..++..+. +|+.+|.++..++.+.+.+...+ ..++.++.+|+.+..-... .....
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 3567787776554 12233444465 89999999988888777665542 1278899999977432111 11123
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 87 g~id~lvnnAg~ 98 (262)
T 3pk0_A 87 GGIDVVCANAGV 98 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578999887654
No 484
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=71.53 E-value=20 Score=28.39 Aligned_cols=81 Identities=9% Similarity=-0.057 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCCCccHHHH----HHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCch-hhhh---hhc
Q 025059 31 PYVTVCDLYCGAGVDVDKW----ETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF-ETQM---QEK 102 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~----~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~---~~~ 102 (258)
.+.+||=.|++.| ....+ +..+. +|+++|.++..++...+.+...+ .++.++.+|+.+..- ...+ ...
T Consensus 12 ~~k~vlItGasgg-iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 12 DNRVAIVTGGAQN-IGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVHEQ 87 (260)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHH
Confidence 4577888876544 33333 33455 89999999887766655554432 268899999976431 1111 112
Q ss_pred CCceeEEEecccc
Q 025059 103 ANQADLVCCFQHL 115 (258)
Q Consensus 103 ~~~fD~V~~~~~l 115 (258)
.+..|+|+...+.
T Consensus 88 ~~~id~vi~~Ag~ 100 (260)
T 3awd_A 88 EGRVDILVACAGI 100 (260)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 3578999877653
No 485
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=71.43 E-value=38 Score=27.21 Aligned_cols=110 Identities=10% Similarity=-0.010 Sum_probs=59.9
Q ss_pred CCEEEEEcCC-CCccHHHHHH----cCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhc
Q 025059 32 YVTVCDLYCG-AGVDVDKWET----ALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEK 102 (258)
Q Consensus 32 ~~~VLDlGcG-~G~~~~~~~~----~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~ 102 (258)
+.+||=.|++ +|+....++. .+. +|+.+|.++. .+...+.+.... + .+.++.+|+.+..-.. .....
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~-~~~~~~~l~~~~-~-~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNES-LEKRVRPIAQEL-N-SPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTT-THHHHHHHHHHT-T-CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHH-HHHHHHHHHHhc-C-CcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5678888875 2444444433 354 8999998876 222222222211 1 3678899997643111 11123
Q ss_pred CCceeEEEeccccccc--------cCCHHHHH-----------HHHHHHHhcccCCcEEEEE
Q 025059 103 ANQADLVCCFQHLQMC--------FETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 103 ~~~fD~V~~~~~l~~~--------~~~~~~~~-----------~~l~~i~~~LkpgG~~i~~ 145 (258)
.+..|+++.+.+.... -.+.++.. .+++.+...|+++|.++.+
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 143 (275)
T 2pd4_A 82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTL 143 (275)
T ss_dssp TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEE
Confidence 4689999887654321 11233332 3345556666667877766
No 486
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=71.35 E-value=29 Score=30.78 Aligned_cols=95 Identities=18% Similarity=0.247 Sum_probs=58.1
Q ss_pred CEEEEEcCCC-C-ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhc-------C-------CCceeEEEEcCCCCCchh
Q 025059 33 VTVCDLYCGA-G-VDVDKWETALIANYIGIDVATSGIGEARDTWENQ-------R-------KNFIAEFFEADPCAENFE 96 (258)
Q Consensus 33 ~~VLDlGcG~-G-~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~-------~-------~~~~~~~~~~d~~~~~~~ 96 (258)
.+|.=||+|. | ..+..++..+. .|+++|.+++.++.+++..... + ......+ ..|. .
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-----~ 110 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-----K 110 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-----G
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-----H
Confidence 5799999997 3 33444444465 8999999999988876643210 0 0001122 2332 1
Q ss_pred hhhhhcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEE
Q 025059 97 TQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLG 144 (258)
Q Consensus 97 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~ 144 (258)
.-...|+|+..- .+...-...++.++...++|+.+++.
T Consensus 111 -----~~~~aDlVIeaV-----pe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 111 -----ELSTVDLVVEAV-----FEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp -----GGTTCSEEEECC-----CSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -----HHCCCCEEEEcC-----CCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 124579887643 24455567788889999998876653
No 487
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=71.24 E-value=4 Score=35.20 Aligned_cols=99 Identities=16% Similarity=0.174 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCC-CccHHHHHHc-CCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCC-CchhhhhhhcCCcee
Q 025059 31 PYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQEKANQAD 107 (258)
Q Consensus 31 ~~~~VLDlGcG~-G~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~fD 107 (258)
++.+|+=+|+|. |..+...+.. +. +|+++|.++..++.+.+.... .+ ..|..+ ..+.+.+ ..+|
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~-----~~---~~~~~~~~~l~~~~----~~~D 231 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGG-----RV---ITLTATEANIKKSV----QHAD 231 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT-----SE---EEEECCHHHHHHHH----HHCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCc-----eE---EEecCCHHHHHHHH----hCCC
Confidence 458999999864 3323333333 55 999999999887766543311 21 122211 1122222 3689
Q ss_pred EEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 108 ~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
+|+..-.... ......+.+.+.+.|++||.++...
T Consensus 232 vVi~~~g~~~----~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 232 LLIGAVLVPG----AKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp EEEECCC-----------CCSCHHHHTTSCTTCEEEECC
T ss_pred EEEECCCCCc----cccchhHHHHHHHhhcCCCEEEEEe
Confidence 9976543221 0111122456778889999887653
No 488
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=71.03 E-value=33 Score=27.20 Aligned_cols=79 Identities=9% Similarity=-0.002 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCCC---ccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 025059 31 PYVTVCDLYCGAG---VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G---~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (258)
.+.++|=-|++.| ..+..++..+. +|+.+|.++..++...+.+.. +..++.+|+.+..-.. ......
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGD-----NGKGMALNVTNPESIEAVLKAITDEF 81 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGG-----GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcc-----cceEEEEeCCCHHHHHHHHHHHHHHc
Confidence 4567888887665 22334444455 899999998888776665533 4678899997743211 111223
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 82 g~iD~lv~nAg~ 93 (248)
T 3op4_A 82 GGVDILVNNAGI 93 (248)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578999887654
No 489
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=70.82 E-value=20 Score=28.58 Aligned_cols=78 Identities=6% Similarity=-0.165 Sum_probs=48.8
Q ss_pred CCEEEEEcCCCCccHHHH----HHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchh-hhh---hhc-
Q 025059 32 YVTVCDLYCGAGVDVDKW----ETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE-TQM---QEK- 102 (258)
Q Consensus 32 ~~~VLDlGcG~G~~~~~~----~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~---~~~- 102 (258)
+.++|=.|++.| ....+ +..+. +|+.+|.++..++.+.+.+...+ .++.++.+|+.+..-. ..+ ...
T Consensus 5 ~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (260)
T 2qq5_A 5 GQVCVVTGASRG-IGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLG--GQCVPVVCDSSQESEVRSLFEQVDREQ 80 (260)
T ss_dssp TCEEEESSTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHS--SEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcC--CceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 456777775544 33333 34455 89999999888776665554432 2688899999774311 111 111
Q ss_pred CCceeEEEecc
Q 025059 103 ANQADLVCCFQ 113 (258)
Q Consensus 103 ~~~fD~V~~~~ 113 (258)
.+..|+++.+.
T Consensus 81 ~g~id~lvnnA 91 (260)
T 2qq5_A 81 QGRLDVLVNNA 91 (260)
T ss_dssp TTCCCEEEECC
T ss_pred CCCceEEEECC
Confidence 46789998876
No 490
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=70.79 E-value=40 Score=27.47 Aligned_cols=98 Identities=16% Similarity=0.142 Sum_probs=53.8
Q ss_pred CEEEEEcCCCCc--cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEE----EEcCCCCCchhhhhhhcCCce
Q 025059 33 VTVCDLYCGAGV--DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEF----FEADPCAENFETQMQEKANQA 106 (258)
Q Consensus 33 ~~VLDlGcG~G~--~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~----~~~d~~~~~~~~~~~~~~~~f 106 (258)
.+|.=||+|.-+ ++..+...+. +|+++|.+++.++..++.- . .+.. ....+.-.... .....-..+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~g--~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 75 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKNG--L----IADFNGEEVVANLPIFSPE-EIDHQNEQV 75 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHC--E----EEEETTEEEEECCCEECGG-GCCTTSCCC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhCC--E----EEEeCCCeeEecceeecch-hhcccCCCC
Confidence 478889998632 2233444455 8999999988777665431 1 1110 00111000000 000001268
Q ss_pred eEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 107 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
|+|+..- .......++..+...++++..++..
T Consensus 76 d~vi~~v-------~~~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 76 DLIIALT-------KAQQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp SEEEECS-------CHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred CEEEEEe-------ccccHHHHHHHHHHhcCCCCEEEEe
Confidence 9987643 2445778888999999888765543
No 491
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=70.55 E-value=19 Score=28.97 Aligned_cols=83 Identities=11% Similarity=-0.025 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~ 103 (258)
.+.+||=-|++.|. .+..++..+. +|+.+|.++..++.+.+.+.... +.++.++++|+.+..-... .....
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 45778877766552 2333444455 89999999988887766654311 1278899999987542111 11223
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 97 g~id~lv~nAg~ 108 (266)
T 4egf_A 97 GGLDVLVNNAGI 108 (266)
T ss_dssp TSCSEEEEECCC
T ss_pred CCCCEEEECCCc
Confidence 578998877654
No 492
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=70.26 E-value=37 Score=28.14 Aligned_cols=82 Identities=11% Similarity=-0.030 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecC------------hhHHHHHHHHHHhcCCCceeEEEEcCCCCCch
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVA------------TSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (258)
.+.+||=-|++.|. .+..++..+. +|+.+|.+ ++.++.+.+.....+ .++.++.+|+.+..-
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~ 121 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG--RRIIARQADVRDLAS 121 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHH
Confidence 45778888876652 2333444455 89999986 555555554444432 378899999977431
Q ss_pred hh----hhhhcCCceeEEEecccc
Q 025059 96 ET----QMQEKANQADLVCCFQHL 115 (258)
Q Consensus 96 ~~----~~~~~~~~fD~V~~~~~l 115 (258)
.. ......+..|+++.+.+.
T Consensus 122 v~~~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 11 111123578999887654
No 493
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=70.20 E-value=28 Score=28.04 Aligned_cols=77 Identities=12% Similarity=0.040 Sum_probs=44.8
Q ss_pred CCEEEEEcCCC-Ccc-HHHHHHcCCCeEEEEecCh-------------------hHHHHHHHHHHhcCCCceeEEEEcCC
Q 025059 32 YVTVCDLYCGA-GVD-VDKWETALIANYIGIDVAT-------------------SGIGEARDTWENQRKNFIAEFFEADP 90 (258)
Q Consensus 32 ~~~VLDlGcG~-G~~-~~~~~~~~~~~v~gvD~s~-------------------~~l~~a~~~~~~~~~~~~~~~~~~d~ 90 (258)
+.+||=+|||. |.. +..++..+.++++.+|.+. .-.+.+.+++.......++..+..++
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 107 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL 107 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence 57999999984 433 3444555888999998653 33455566665543333455554444
Q ss_pred CCCchhhhhhhcCCceeEEEec
Q 025059 91 CAENFETQMQEKANQADLVCCF 112 (258)
Q Consensus 91 ~~~~~~~~~~~~~~~fD~V~~~ 112 (258)
....+...+ ..+|+|+..
T Consensus 108 ~~~~~~~~~----~~~DvVi~~ 125 (251)
T 1zud_1 108 TGEALKDAV----ARADVVLDC 125 (251)
T ss_dssp CHHHHHHHH----HHCSEEEEC
T ss_pred CHHHHHHHH----hcCCEEEEC
Confidence 322221112 368999864
No 494
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=69.87 E-value=3.9 Score=41.45 Aligned_cols=45 Identities=18% Similarity=0.210 Sum_probs=37.4
Q ss_pred CCCEEEEEcCCCCccHHHHHHcCC-CeEEEEecChhHHHHHHHHHH
Q 025059 31 PYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWE 75 (258)
Q Consensus 31 ~~~~VLDlGcG~G~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~ 75 (258)
+..+++||-||.|++...+...+. ..+.++|+++.+++.-+.+++
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p 895 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP 895 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC
Confidence 457899999999999999988886 468899999999887666543
No 495
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=69.82 E-value=6.4 Score=34.68 Aligned_cols=100 Identities=8% Similarity=-0.050 Sum_probs=58.7
Q ss_pred cCCCCEEEEEcC-C-CCccHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEE--cCCCCC-----------
Q 025059 29 SHPYVTVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFE--ADPCAE----------- 93 (258)
Q Consensus 29 ~~~~~~VLDlGc-G-~G~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~--~d~~~~----------- 93 (258)
..++.+||=.|+ | -|..+..+++....++++++.+++.++.+++. +. ...+-. .|....
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~l----Ga--~~~i~~~~~~~~~~~~~~~~~~~~~ 291 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRAL----GC--DLVINRAELGITDDIADDPRRVVET 291 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TC--CCEEEHHHHTCCTTGGGCHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CC--CEEEecccccccccccccccccchh
Confidence 458899999997 3 35566666665445899999998888877532 11 111111 111000
Q ss_pred --chhhhhh-hcCCceeEEEeccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 94 --NFETQMQ-EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 94 --~~~~~~~-~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.+...+. .....+|+|+...+ . ..+....++|++||.++..
T Consensus 292 ~~~~~~~v~~~~g~g~Dvvid~~G-------~----~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 292 GRKLAKLVVEKAGREPDIVFEHTG-------R----VTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHHSSCCSEEEECSC-------H----HHHHHHHHHSCTTCEEEES
T ss_pred hhHHHHHHHHHhCCCceEEEECCC-------c----hHHHHHHHHHhcCCEEEEE
Confidence 0011111 12357999976442 1 2456777899999999876
No 496
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=69.61 E-value=42 Score=26.97 Aligned_cols=83 Identities=8% Similarity=-0.035 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEec-------------ChhHHHHHHHHHHhcCCCceeEEEEcCCCCCc
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDV-------------ATSGIGEARDTWENQRKNFIAEFFEADPCAEN 94 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~-------------s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~ 94 (258)
.+.++|=-|++.|. .+..++..+. +|+.+|. +++.++.+.+.....+ .++.++.+|+.+..
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~ 86 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN--RRIVAAVVDTRDFD 86 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCCHH
Confidence 35788888876652 2333444465 8999998 5666666555554432 27889999997743
Q ss_pred hhhh----hhhcCCceeEEEeccccc
Q 025059 95 FETQ----MQEKANQADLVCCFQHLQ 116 (258)
Q Consensus 95 ~~~~----~~~~~~~fD~V~~~~~l~ 116 (258)
-... .....+..|+++.+.+..
T Consensus 87 ~v~~~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 2111 111236789998876553
No 497
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=69.58 E-value=42 Score=26.99 Aligned_cols=82 Identities=10% Similarity=-0.079 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecC------------hhHHHHHHHHHHhcCCCceeEEEEcCCCCCch
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVA------------TSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (258)
.+.++|=-|++.|. .+..++..+. +|+.+|.+ .+.++...+.....+ .++.++.+|+.+..-
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~ 85 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTG--RRCISAKVDVKDRAA 85 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcC--CeEEEEeCCCCCHHH
Confidence 35788888876652 2334444465 89999986 455555544444332 278899999977431
Q ss_pred hh----hhhhcCCceeEEEecccc
Q 025059 96 ET----QMQEKANQADLVCCFQHL 115 (258)
Q Consensus 96 ~~----~~~~~~~~fD~V~~~~~l 115 (258)
.. ......+..|+++.+.+.
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 86 LESFVAEAEDTLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCC
Confidence 11 111123578999887654
No 498
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=68.96 E-value=44 Score=26.92 Aligned_cols=85 Identities=12% Similarity=0.056 Sum_probs=51.2
Q ss_pred EEEEEcCCCCc--cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEEe
Q 025059 34 TVCDLYCGAGV--DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (258)
Q Consensus 34 ~VLDlGcG~G~--~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~~ 111 (258)
+|.=||+|.=+ .+..+.. +. +|+++|.+++.++.+.+. . +... +. .. . -...|+|+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~--g------~~~~--~~-~~-~-------~~~~D~vi~ 61 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEE--F------GSEA--VP-LE-R-------VAEARVIFT 61 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHH--H------CCEE--CC-GG-G-------GGGCSEEEE
T ss_pred eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHC--C------Cccc--CH-HH-H-------HhCCCEEEE
Confidence 57778998732 2334444 54 799999998877665443 1 1111 11 11 1 135799876
Q ss_pred ccccccccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 025059 112 FQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (258)
Q Consensus 112 ~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~ 145 (258)
.- .+......++..+...+++|..++..
T Consensus 62 ~v------~~~~~~~~v~~~l~~~l~~~~~vv~~ 89 (289)
T 2cvz_A 62 CL------PTTREVYEVAEALYPYLREGTYWVDA 89 (289)
T ss_dssp CC------SSHHHHHHHHHHHTTTCCTTEEEEEC
T ss_pred eC------CChHHHHHHHHHHHhhCCCCCEEEEC
Confidence 43 33444667778888889888766643
No 499
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=68.95 E-value=16 Score=29.62 Aligned_cols=82 Identities=5% Similarity=-0.072 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCCCc---cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 025059 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (258)
Q Consensus 31 ~~~~VLDlGcG~G~---~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~ 103 (258)
.+.+||=-|++.|. .+..++..+. +|+.+|.++..++...+.+...+ .++.++.+|+.+..-.. ......
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAG--LEGRGAVLNVNDATAVDALVESTLKEF 103 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHT--CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 35677877765541 2233444465 89999999988887766665442 26788999997743211 111123
Q ss_pred CceeEEEecccc
Q 025059 104 NQADLVCCFQHL 115 (258)
Q Consensus 104 ~~fD~V~~~~~l 115 (258)
+..|+++.+.+.
T Consensus 104 g~iD~lvnnAg~ 115 (270)
T 3ftp_A 104 GALNVLVNNAGI 115 (270)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578999887654
No 500
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=68.91 E-value=24 Score=28.99 Aligned_cols=88 Identities=13% Similarity=0.068 Sum_probs=55.2
Q ss_pred CEEEEEcCCCCc--cHHHHHHcCCCeEEEEecChhHHHHHHHHHHhcCCCceeEEEEcCCCCCchhhhhhhcCCceeEEE
Q 025059 33 VTVCDLYCGAGV--DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (258)
Q Consensus 33 ~~VLDlGcG~G~--~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~fD~V~ 110 (258)
.+|.=||+|.=+ .+..+...+. +|+++|.+++.++.+.+. .+.. ..| +.+. .. .|+|+
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~--------g~~~-~~~-----~~~~----~~-aDvvi 75 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEA--------GATL-ADS-----VADV----AA-ADLIH 75 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHT--------TCEE-CSS-----HHHH----TT-SSEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHC--------CCEE-cCC-----HHHH----Hh-CCEEE
Confidence 578889998733 2333434455 899999999887766532 1221 111 2111 23 89987
Q ss_pred eccccccccCCHHHHHHHHHHHHhcccCCcEEEEEE
Q 025059 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (258)
Q Consensus 111 ~~~~l~~~~~~~~~~~~~l~~i~~~LkpgG~~i~~~ 146 (258)
..- .+....+..+..+...+++|.+++-..
T Consensus 76 ~~v------p~~~~~~~v~~~l~~~l~~g~ivv~~s 105 (296)
T 3qha_A 76 ITV------LDDAQVREVVGELAGHAKPGTVIAIHS 105 (296)
T ss_dssp ECC------SSHHHHHHHHHHHHTTCCTTCEEEECS
T ss_pred EEC------CChHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 643 335567778899999999988776553
Done!