BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025061
(258 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255539324|ref|XP_002510727.1| conserved hypothetical protein [Ricinus communis]
gi|223551428|gb|EEF52914.1| conserved hypothetical protein [Ricinus communis]
Length = 264
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/253 (63%), Positives = 192/253 (75%), Gaps = 17/253 (6%)
Query: 15 SPLHTWSQRPHHASFTAFSNNKGTNQYKKQFVFCCKKQEQEDDAR--TLNRFRIEEQDDD 72
+PLH +P+ +F + S + N +KQ + CC ++D RFR++E
Sbjct: 20 TPLHLL--KPN-LNFLSASPSFRFNSCRKQHLPCCTNSFPDEDQHQPLFCRFRLQEP--- 73
Query: 73 SRTKRREVMFQLAFT-ACSFPAIVSYALA-ANDLRVYTDELNKFEISIPQDWQLGAGEPN 130
RRE +F +AFT +FP ++S A A +D R+YTD+ NKF+ISIPQDW++GAGEPN
Sbjct: 74 --YGRREALFSVAFTTGFTFPGLISNAFAEIDDFRLYTDDANKFQISIPQDWRVGAGEPN 131
Query: 131 GFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVA 190
GFKS+TAFYP+EAS SSVSVVITGLGPDFTRMESFGKVEAFA+TLVSGLDRSW+RPPGVA
Sbjct: 132 GFKSVTAFYPEEASGSSVSVVITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQRPPGVA 191
Query: 191 AKLIDW-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYG 245
AKLID YYIEYTLQNPGE RKHLFSA+GMA NGWYNRLYTVTGQFVEEESE YG
Sbjct: 192 AKLIDCKATKGIYYIEYTLQNPGEGRKHLFSALGMAFNGWYNRLYTVTGQFVEEESENYG 251
Query: 246 SNIEKAVASFRFI 258
S ++K V+SF+FI
Sbjct: 252 SKVQKVVSSFKFI 264
>gi|225457650|ref|XP_002273332.1| PREDICTED: psbP domain-containing protein 3, chloroplastic [Vitis
vinifera]
gi|297745601|emb|CBI40766.3| unnamed protein product [Vitis vinifera]
Length = 253
Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 158/262 (60%), Positives = 192/262 (73%), Gaps = 23/262 (8%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKGTNQY-----KKQFVFCCKKQEQEDDARTLNRFR 65
MA PL R F+A+S+ KG KKQ V CK + +E++ + F
Sbjct: 1 MALYFPLPL---RSGSCDFSAYSSKKGYGSRTGKCGKKQRVVFCKNENKEEEKTS---FG 54
Query: 66 IEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALA----ANDLRVYTDELNKFEISIPQD 121
I+EQ R REV+ Q+ F+ S AIV ALA D +VY+DE+NKF+I IPQD
Sbjct: 55 IKEQHGGGR---REVVLQMVFSTISLQAIVPNALADTEVPEDFKVYSDEVNKFKIQIPQD 111
Query: 122 WQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDR 181
WQ+G+GEP+GFKS+TAFYP+EAS S+VSVVITGLG DFTR+ESFGKV+AFA+ LV+GLDR
Sbjct: 112 WQVGSGEPSGFKSVTAFYPEEASGSNVSVVITGLGADFTRLESFGKVDAFAENLVNGLDR 171
Query: 182 SWRRPPGVAAKLIDW-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQF 236
SW+RPPG+AAKLID FYYIEY LQNPGESR+HLFSA+GMA+NGWYNRLYTVTGQ+
Sbjct: 172 SWQRPPGIAAKLIDCRAANGFYYIEYWLQNPGESRRHLFSAVGMANNGWYNRLYTVTGQY 231
Query: 237 VEEESEKYGSNIEKAVASFRFI 258
+EEESEK+ S IEK VASFRFI
Sbjct: 232 LEEESEKFSSKIEKVVASFRFI 253
>gi|449458059|ref|XP_004146765.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Cucumis sativus]
Length = 257
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/196 (71%), Positives = 157/196 (80%), Gaps = 10/196 (5%)
Query: 73 SRTKRREVMFQLAFTACSFPAIVSYALA-----ANDLRVYTDELNKFEISIPQDWQLGAG 127
S RRE+M + FTA SF + S ALA A D R YTDE NKF + IPQDWQ+G G
Sbjct: 62 SGVNRREIMLGIGFTAFSFQEVGSNALAESVVVAEDYRTYTDEANKFSLVIPQDWQVGNG 121
Query: 128 EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPP 187
EPNGFKS+TAF+PQE S+S+VSVVI+GLGPD+TRMESFGKVE FADTLVSGLDRSW+RPP
Sbjct: 122 EPNGFKSVTAFFPQETSTSNVSVVISGLGPDYTRMESFGKVEEFADTLVSGLDRSWKRPP 181
Query: 188 GVAAKLIDW-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESE 242
GVAAKLID YYIEYTLQNPGESRKHL+SAIGM+SNGWYNRLYT+TGQ+ +EESE
Sbjct: 182 GVAAKLIDCRSSKGIYYIEYTLQNPGESRKHLYSAIGMSSNGWYNRLYTITGQYADEESE 241
Query: 243 KYGSNIEKAVASFRFI 258
Y S IEK V SF FI
Sbjct: 242 SYSSKIEKVVNSFAFI 257
>gi|147809819|emb|CAN64877.1| hypothetical protein VITISV_030793 [Vitis vinifera]
Length = 247
Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 147/243 (60%), Positives = 181/243 (74%), Gaps = 20/243 (8%)
Query: 23 RPHHASFTAFSNNKGTNQY-----KKQFVFCCKKQEQEDDARTLNRFRIEEQDDDSRTKR 77
R F+A+S+ KG KKQ V CK + +E++ + F I+EQ R
Sbjct: 10 RSGSCDFSAYSSKKGCGSRTGKCGKKQRVVFCKNENKEEEKTS---FGIKEQHGGGR--- 63
Query: 78 REVMFQLAFTACSFPAIVSYALA----ANDLRVYTDELNKFEISIPQDWQLGAGEPNGFK 133
REV+ Q+ F+ S AIV ALA D +VY+DE+NKF+I IPQDWQ+G+GEP+GFK
Sbjct: 64 REVVLQIVFSTISLQAIVPNALADTEVPEDFKVYSDEVNKFKIQIPQDWQVGSGEPSGFK 123
Query: 134 SITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKL 193
S+TAFYP+EAS S+VSVVITGLG DFTR+ESFGKV+AFA+ LV+GLDRSW+RPPG+AAKL
Sbjct: 124 SVTAFYPEEASGSNVSVVITGLGADFTRLESFGKVDAFAENLVNGLDRSWQRPPGIAAKL 183
Query: 194 IDW-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNI 248
ID FYYIEY LQNPGESR+HLFSA+GMA+NGWYNRLYTVTGQ++EEESEK+ S I
Sbjct: 184 IDCRAANGFYYIEYWLQNPGESRRHLFSAVGMANNGWYNRLYTVTGQYLEEESEKFSSKI 243
Query: 249 EKA 251
EK
Sbjct: 244 EKV 246
>gi|188509930|gb|ACD56619.1| unknown predicted protein [Gossypioides kirkii]
Length = 274
Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 145/199 (72%), Positives = 163/199 (81%), Gaps = 15/199 (7%)
Query: 67 EEQDDD---SRTKRREVMFQLAFTACSFP-AIVSYALAA------NDLRVYTDELNKFEI 116
E ++DD + T+RR+ + Q A SFP I+S A+A D RVYTDE NKF+I
Sbjct: 46 EMKEDDGHATSTRRRQFILQAPLIAFSFPQLIMSTAIAVAEIDVPQDFRVYTDEQNKFKI 105
Query: 117 SIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLV 176
IPQDWQ+GAGEPN FKSITAFYP+E ++S+VSV ITGLGPDFTRMESFGKV+AFADTLV
Sbjct: 106 FIPQDWQVGAGEPNNFKSITAFYPEEEANSNVSVAITGLGPDFTRMESFGKVDAFADTLV 165
Query: 177 SGLDRSWRRPPGVAAKLIDW-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYT 231
SGLDRSW+RPPGVAAKLID FYYIEYTLQNPGESR+HLFSAIGMASNGWYNRLYT
Sbjct: 166 SGLDRSWQRPPGVAAKLIDCKAANGFYYIEYTLQNPGESRRHLFSAIGMASNGWYNRLYT 225
Query: 232 VTGQFVEEESEKYGSNIEK 250
VTGQFVEEE+EKYGS IEK
Sbjct: 226 VTGQFVEEEAEKYGSRIEK 244
>gi|224083366|ref|XP_002306998.1| predicted protein [Populus trichocarpa]
gi|222856447|gb|EEE93994.1| predicted protein [Populus trichocarpa]
Length = 193
Score = 286 bits (731), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 137/185 (74%), Positives = 158/185 (85%), Gaps = 9/185 (4%)
Query: 75 TKRREVMFQLAFTACSFPAIVSYALAAN----DLRVYTDELNKFEISIPQDWQLGAGEPN 130
TKRRE +F + FTA +FPAI S ALAA D RVYTD+ NKF+ISIPQ WQ+GAGEP+
Sbjct: 2 TKRREALFNMVFTAFTFPAIASTALAATGVAEDSRVYTDDANKFKISIPQGWQVGAGEPS 61
Query: 131 GFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVA 190
G+KS+TAFYP+EAS+SSVSVVITGLGPDFTR+ESFGKV+AFA+TLV GLDRSW+RPPGVA
Sbjct: 62 GYKSVTAFYPEEASNSSVSVVITGLGPDFTRLESFGKVDAFAETLVGGLDRSWQRPPGVA 121
Query: 191 AKLID-----WFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYG 245
AKLID YYIEYTLQNPGESR+HL SA+G+ NGWYNRLYTVTGQFV+EESEK+G
Sbjct: 122 AKLIDSKAANGLYYIEYTLQNPGESRRHLLSALGVTFNGWYNRLYTVTGQFVDEESEKFG 181
Query: 246 SNIEK 250
+ I K
Sbjct: 182 TEIRK 186
>gi|21537211|gb|AAM61552.1| thylakoid lumen protein, chloroplast precursor [Arabidopsis
thaliana]
Length = 247
Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 153/259 (59%), Positives = 179/259 (69%), Gaps = 23/259 (8%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKGTNQYKKQFVFCCKKQEQED--DARTLNRFRIEE 68
MA+ISP W P +FSN + T ++ C D+ + RI
Sbjct: 1 MAAISP---WLSSPQ-----SFSNPRVTITDSRR---CSSISAAISVLDSSNEEQHRISS 49
Query: 69 QDDDSRTKRREVMFQLAFTACSFPAIVSYALAAND----LRVYTDELNKFEISIPQDWQL 124
+D KRR+VM Q+A + P +S A A + RVYTDE NKFEISIPQDWQ+
Sbjct: 50 RDHVG-MKRRDVMLQIASSVFFLPLAISPAFAETNASEAFRVYTDETNKFEISIPQDWQV 108
Query: 125 GAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWR 184
G EPNGFKSITAFYPQE S+S+VS+ ITGLGPDFTRMESFGKVEAFA+TLVSGLDRSW+
Sbjct: 109 GQAEPNGFKSITAFYPQETSTSNVSIAITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQ 168
Query: 185 RPPGVAAKLID-----WFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEE 239
+P GV AKLID FYYIEYTLQNPGE+RKHL+SAIGMA+NGWYNRLYTVTGQF +E
Sbjct: 169 KPVGVTAKLIDSRASKGFYYIEYTLQNPGEARKHLYSAIGMATNGWYNRLYTVTGQFTDE 228
Query: 240 ESEKYGSNIEKAVASFRFI 258
ES + S I+K V SFRFI
Sbjct: 229 ESSEQSSKIQKTVKSFRFI 247
>gi|18411110|ref|NP_565131.1| PsbP domain-containing protein 3 [Arabidopsis thaliana]
gi|18203439|sp|Q9S720.2|PPD3_ARATH RecName: Full=PsbP domain-containing protein 3, chloroplastic;
AltName: Full=OEC23-like protein 2; Flags: Precursor
gi|32815945|gb|AAP88357.1| At1g76450 [Arabidopsis thaliana]
gi|110742837|dbj|BAE99317.1| hypothetical protein [Arabidopsis thaliana]
gi|332197723|gb|AEE35844.1| PsbP domain-containing protein 3 [Arabidopsis thaliana]
Length = 247
Score = 283 bits (724), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 153/259 (59%), Positives = 179/259 (69%), Gaps = 23/259 (8%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKGTNQYKKQFVFCCKKQEQED--DARTLNRFRIEE 68
MA+ISP W P +FSN + T ++ C D+ + RI
Sbjct: 1 MAAISP---WLSSPQ-----SFSNPRVTITDSRR---CSSISAAISVLDSSNEEQHRISS 49
Query: 69 QDDDSRTKRREVMFQLAFTACSFPAIVSYALAAND----LRVYTDELNKFEISIPQDWQL 124
+D KRR+VM Q+A + P +S A A + RVYTDE NKFEISIPQDWQ+
Sbjct: 50 RDHVG-MKRRDVMLQIASSVFFLPLAISPAFAETNASEAFRVYTDETNKFEISIPQDWQV 108
Query: 125 GAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWR 184
G EPNGFKSITAFYPQE S+S+VS+ ITGLGPDFTRMESFGKVEAFA+TLVSGLDRSW+
Sbjct: 109 GQAEPNGFKSITAFYPQETSTSNVSIAITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQ 168
Query: 185 RPPGVAAKLID-----WFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEE 239
+P GV AKLID FYYIEYTLQNPGE+RKHL+SAIGMA+NGWYNRLYTVTGQF +E
Sbjct: 169 KPVGVTAKLIDSRASKGFYYIEYTLQNPGEARKHLYSAIGMATNGWYNRLYTVTGQFTDE 228
Query: 240 ESEKYGSNIEKAVASFRFI 258
ES + S I+K V SFRFI
Sbjct: 229 ESAEQSSKIQKTVKSFRFI 247
>gi|449522159|ref|XP_004168095.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Cucumis sativus]
Length = 188
Score = 282 bits (722), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 137/188 (72%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 81 MFQLAFTACSFPAIVSYALA-----ANDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSI 135
M + FTA SF +VS ALA A D R YTDE NKF + IPQDWQ+G GEPNGFKS+
Sbjct: 1 MLGIGFTAFSFQEVVSNALAESVVVAEDYRTYTDEANKFSLVIPQDWQVGNGEPNGFKSV 60
Query: 136 TAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLID 195
TAF+PQE S+S+VSVVI+GLGPD+TRMESFGKVE FADTLVSGLDRSW+RPPGVAAKLID
Sbjct: 61 TAFFPQETSTSNVSVVISGLGPDYTRMESFGKVEEFADTLVSGLDRSWKRPPGVAAKLID 120
Query: 196 W-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEK 250
YYIEYTLQNPGESRKHL+SAIGM+SNGWYNRLYT+TGQ+ +EESE Y S IEK
Sbjct: 121 CRSSKGIYYIEYTLQNPGESRKHLYSAIGMSSNGWYNRLYTITGQYADEESESYSSKIEK 180
Query: 251 AVASFRFI 258
V SF FI
Sbjct: 181 VVNSFAFI 188
>gi|297839519|ref|XP_002887641.1| hypothetical protein ARALYDRAFT_476802 [Arabidopsis lyrata subsp.
lyrata]
gi|297333482|gb|EFH63900.1| hypothetical protein ARALYDRAFT_476802 [Arabidopsis lyrata subsp.
lyrata]
Length = 225
Score = 279 bits (713), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 161/212 (75%), Gaps = 11/212 (5%)
Query: 57 DARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAAND----LRVYTDELN 112
D+ + RI +D KRRE M Q+A + P VS A A + RVYTDE N
Sbjct: 15 DSSNEEQHRISSRDHVG-IKRREAMLQIASSVFFLPLAVSPAFAETNASEAFRVYTDEAN 73
Query: 113 KFEISIPQ-DWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAF 171
KFEISIPQ DWQ+G EPNGFKSITAFYPQE S+S+VS+ ITGLGPDFTRMESFGKVEAF
Sbjct: 74 KFEISIPQEDWQVGQAEPNGFKSITAFYPQETSTSNVSIAITGLGPDFTRMESFGKVEAF 133
Query: 172 ADTLVSGLDRSWRRPPGVAAKLID-----WFYYIEYTLQNPGESRKHLFSAIGMASNGWY 226
A+TLVSGLDRSW++P GV AKLID FYYIEYTLQNPGE+RKHL+SAIGMA+NGWY
Sbjct: 134 AETLVSGLDRSWQKPAGVTAKLIDSRSSKGFYYIEYTLQNPGEARKHLYSAIGMATNGWY 193
Query: 227 NRLYTVTGQFVEEESEKYGSNIEKAVASFRFI 258
NRLYTVTGQF +EES + S I+K V SFRFI
Sbjct: 194 NRLYTVTGQFTDEESAEQSSKIQKTVKSFRFI 225
>gi|388521577|gb|AFK48850.1| unknown [Lotus japonicus]
Length = 250
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/264 (54%), Positives = 182/264 (68%), Gaps = 30/264 (11%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKG------TNQYKKQFVFCCKKQEQEDDARTLNRF 64
MASIS RP + TA + +KG +KK + ++ +NR
Sbjct: 1 MASISWSCCLRWRPTISDRTASAADKGFSPPITLEHHKKTPCLLSARNSSIEEGHAVNR- 59
Query: 65 RIEEQDDDSRTKRREVMFQLAFTA-CSFPAIVSYALAANDL----RVYTDELNKFEISIP 119
R+++F + A + P+ V ALA ND+ R+Y D+ NKF+I IP
Sbjct: 60 -------------RQLVFYTSLAAFAAAPSTVLKALALNDVVEDVRIYIDDENKFKIEIP 106
Query: 120 QDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGL 179
QDW++G G+ +GFKS+TAFYP+EASSS+VSV ITGLGPDFT+MESFGKV+ FA+TLVSGL
Sbjct: 107 QDWEVGTGDSSGFKSLTAFYPKEASSSNVSVAITGLGPDFTKMESFGKVDEFAETLVSGL 166
Query: 180 DRSWRRPPGVAAKLID-----WFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTG 234
DRSWR+PPGVAAKLI+ YYIEY+LQNPGESR+HL+SAIGMA+NGWYNRLYTVTG
Sbjct: 167 DRSWRKPPGVAAKLINSKPSKGIYYIEYSLQNPGESRRHLYSAIGMATNGWYNRLYTVTG 226
Query: 235 QFVEEESEKYGSNIEKAVASFRFI 258
Q+VEEE++KY S I+KAV SF+FI
Sbjct: 227 QYVEEETDKYASEIQKAVTSFKFI 250
>gi|356508481|ref|XP_003522985.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Glycine max]
Length = 244
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/191 (67%), Positives = 156/191 (81%), Gaps = 9/191 (4%)
Query: 77 RREVMFQ--LAFTACSFPAIVSYALAANDLRVYTDELNKFEISIPQDWQLGAG--EPNGF 132
RR+++ +A A + P ++ + D+RVYTD+ NKF+I IPQ+WQ+G G E +GF
Sbjct: 54 RRQLILHTPVAVAAFAVPNALALNDVSEDVRVYTDDENKFKIEIPQEWQVGTGDGESSGF 113
Query: 133 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 192
KSITAFYP AS+S+VSVVITGLGPDFTRMESFGKV+ FA TLVSGLDRSWR+PPGVAAK
Sbjct: 114 KSITAFYPTVASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDRSWRKPPGVAAK 173
Query: 193 LIDW-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSN 247
LID YYIEY+LQNPGESR++L+SAIGMASNGWYNRLYTVTGQ+VEEE++KY S
Sbjct: 174 LIDCKSSDGIYYIEYSLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQYVEEETDKYASK 233
Query: 248 IEKAVASFRFI 258
++K VASFRFI
Sbjct: 234 VQKVVASFRFI 244
>gi|357467179|ref|XP_003603874.1| PsbP domain-containing protein [Medicago truncatula]
gi|355492922|gb|AES74125.1| PsbP domain-containing protein [Medicago truncatula]
Length = 241
Score = 263 bits (671), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 126/191 (65%), Positives = 155/191 (81%), Gaps = 9/191 (4%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAANDLR----VYTDELNKFEISIPQDWQLGAGEPNGF 132
RR+++ + A + + S ALA ND+ +YTD+ NKF+I IPQ+WQ+G GE GF
Sbjct: 51 RRQLILYTSTAAIAASSTDSNALALNDVSEDFSIYTDDENKFKIDIPQEWQIGTGESAGF 110
Query: 133 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 192
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLVSGLDRSW++PPGVAAK
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAK 170
Query: 193 LIDW-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSN 247
LID FY+IEYTLQ+PGE RKHL+SAIGM +NGWYNRLYTVTGQ+ EEE++KY S
Sbjct: 171 LIDCKSSKGFYFIEYTLQSPGEGRKHLYSAIGMLTNGWYNRLYTVTGQYGEEETDKYASK 230
Query: 248 IEKAVASFRFI 258
I+KAV SF+FI
Sbjct: 231 IQKAVRSFKFI 241
>gi|388507848|gb|AFK41990.1| unknown [Medicago truncatula]
Length = 241
Score = 262 bits (670), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 154/191 (80%), Gaps = 9/191 (4%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAANDLR----VYTDELNKFEISIPQDWQLGAGEPNGF 132
RR+++ + A + + S ALA ND+ +YTD+ NKF+I IPQ+WQ+G GE GF
Sbjct: 51 RRQLILHTSTAAIAASSTDSNALALNDVSEDFSIYTDDENKFKIDIPQEWQIGTGESAGF 110
Query: 133 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 192
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLVSGLDRSW++PPGVAAK
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAK 170
Query: 193 LIDW-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSN 247
LID FY+IEYTLQ+PGE RKHL+SAIGM +NGWYNRLYTVTGQ+ EEE++KY S
Sbjct: 171 LIDCKSSKGFYFIEYTLQSPGEGRKHLYSAIGMLTNGWYNRLYTVTGQYGEEETDKYASK 230
Query: 248 IEKAVASFRFI 258
I+K V SF+FI
Sbjct: 231 IQKTVRSFKFI 241
>gi|255646871|gb|ACU23906.1| unknown [Glycine max]
Length = 244
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/191 (67%), Positives = 155/191 (81%), Gaps = 9/191 (4%)
Query: 77 RREVMFQ--LAFTACSFPAIVSYALAANDLRVYTDELNKFEISIPQDWQLGAG--EPNGF 132
RR+++ +A A + P ++ + D+RVYTD+ NKF+I IPQ+WQ+G G E +GF
Sbjct: 54 RRQLILHTPVAVAAFAVPNALALNDVSEDVRVYTDDENKFKIEIPQEWQVGTGDGESSGF 113
Query: 133 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 192
KSITAFYP AS+S+VSVVITG GPDFTRMESFGKV+ FA TLVSGLDRSWR+PPGVAAK
Sbjct: 114 KSITAFYPTVASNSNVSVVITGPGPDFTRMESFGKVDEFAQTLVSGLDRSWRKPPGVAAK 173
Query: 193 LIDW-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSN 247
LID YYIEY+LQNPGESR++L+SAIGMASNGWYNRLYTVTGQ+VEEE++KY S
Sbjct: 174 LIDCKSSDGIYYIEYSLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQYVEEETDKYASK 233
Query: 248 IEKAVASFRFI 258
++K VASFRFI
Sbjct: 234 VQKVVASFRFI 244
>gi|388515155|gb|AFK45639.1| unknown [Medicago truncatula]
Length = 241
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 124/191 (64%), Positives = 153/191 (80%), Gaps = 9/191 (4%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAANDLR----VYTDELNKFEISIPQDWQLGAGEPNGF 132
RR+++ + A + + S ALA ND+ +Y D+ NKF+I IPQ+WQ+G GE GF
Sbjct: 51 RRQLILYTSTAAIAASSTDSNALALNDVSEDFSIYADDENKFKIDIPQEWQIGTGESAGF 110
Query: 133 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 192
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLVSGLDRSW++PPGVAAK
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAK 170
Query: 193 LIDW-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSN 247
LID FY+IEYTLQ+PGE RKHL+SAIGM +NGWYNRLYTVTGQ+ EEE++KY S
Sbjct: 171 LIDCKSSKGFYFIEYTLQSPGEGRKHLYSAIGMLTNGWYNRLYTVTGQYGEEETDKYASK 230
Query: 248 IEKAVASFRFI 258
I+KAV SF+ I
Sbjct: 231 IQKAVRSFKLI 241
>gi|357467177|ref|XP_003603873.1| PsbP domain-containing protein [Medicago truncatula]
gi|355492921|gb|AES74124.1| PsbP domain-containing protein [Medicago truncatula]
Length = 253
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 155/203 (76%), Gaps = 21/203 (10%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAANDLR----VYTDELNKFEISIPQDWQLGAGEPNGF 132
RR+++ + A + + S ALA ND+ +YTD+ NKF+I IPQ+WQ+G GE GF
Sbjct: 51 RRQLILYTSTAAIAASSTDSNALALNDVSEDFSIYTDDENKFKIDIPQEWQIGTGESAGF 110
Query: 133 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 192
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLVSGLDRSW++PPGVAAK
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAK 170
Query: 193 LIDW-----------------FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQ 235
LID FY+IEYTLQ+PGE RKHL+SAIGM +NGWYNRLYTVTGQ
Sbjct: 171 LIDCKSSKVLTASLPRKNGSGFYFIEYTLQSPGEGRKHLYSAIGMLTNGWYNRLYTVTGQ 230
Query: 236 FVEEESEKYGSNIEKAVASFRFI 258
+ EEE++KY S I+KAV SF+FI
Sbjct: 231 YGEEETDKYASKIQKAVRSFKFI 253
>gi|356517170|ref|XP_003527262.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Glycine max]
Length = 248
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/202 (64%), Positives = 161/202 (79%), Gaps = 9/202 (4%)
Query: 66 IEEQDDDSRTKRREVMFQLAFTACSFPAIVSYAL--AANDLRVYTDELNKFEISIPQDWQ 123
IEE++ + +R+ ++ A +F + AL + D+RVYTD+ NKF+I IP++WQ
Sbjct: 47 IEEEEGRAVNRRQLILHTPVAAAAAFAVPNALALNDVSEDVRVYTDDENKFKIEIPEEWQ 106
Query: 124 LGAG--EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDR 181
+G G E +GFKSITAFYP +AS+S+VSVVITGLGPDFTRMESFGKV+ FA TLVSGLDR
Sbjct: 107 VGTGDGESSGFKSITAFYPTQASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDR 166
Query: 182 SWRRPPGVAAKLIDW-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQF 236
SWR+PPGVAAKLID YYIEY LQNPGESR++L+SAIGMASNGWYNRLYTVTGQ+
Sbjct: 167 SWRKPPGVAAKLIDCKSSNGIYYIEYLLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQY 226
Query: 237 VEEESEKYGSNIEKAVASFRFI 258
VEE+++KY S ++K VASFRFI
Sbjct: 227 VEEDTDKYASKVQKVVASFRFI 248
>gi|115477246|ref|NP_001062219.1| Os08g0512500 [Oryza sativa Japonica Group]
gi|42408803|dbj|BAD10064.1| thylakoid lumen protein, chloroplast precursor-like [Oryza sativa
Japonica Group]
gi|113624188|dbj|BAF24133.1| Os08g0512500 [Oryza sativa Japonica Group]
gi|215686998|dbj|BAG90812.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201441|gb|EEC83868.1| hypothetical protein OsI_29855 [Oryza sativa Indica Group]
gi|222640852|gb|EEE68984.1| hypothetical protein OsJ_27910 [Oryza sativa Japonica Group]
Length = 242
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 132/161 (81%), Gaps = 7/161 (4%)
Query: 104 LRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRME 163
R Y DE NKF I+IPQDW +GAGE +GFKS+TAFYP + + S+VSV ITG+GPDFT ++
Sbjct: 81 FRTYEDEANKFSIAIPQDWLIGAGEVSGFKSVTAFYPDQVADSNVSVAITGIGPDFTSLK 140
Query: 164 SFGKVEAFADTLVSGLDRSWRRPPGVAAKLI-----DWFYYIEYTLQNPGESRKHLFSAI 218
SFG V+AFA+TLV+GLDRSW+RPPGVAAKLI + FYYIEYTLQNPGE R+H+ SAI
Sbjct: 141 SFGDVDAFAETLVNGLDRSWKRPPGVAAKLINSRAANGFYYIEYTLQNPGEQRRHIVSAI 200
Query: 219 GMASNGWYNRLYTVTGQFVEEES--EKYGSNIEKAVASFRF 257
GMA NGWYNRLYTVTGQ+++E+ +KY + IEK V SFRF
Sbjct: 201 GMAFNGWYNRLYTVTGQYIDEDGDVDKYRAQIEKCVQSFRF 241
>gi|226496587|ref|NP_001147730.1| LOC100281340 [Zea mays]
gi|195613364|gb|ACG28512.1| thylakoid lumen protein [Zea mays]
gi|224034069|gb|ACN36110.1| unknown [Zea mays]
gi|414869459|tpg|DAA48016.1| TPA: Thylakoid lumen protein isoform 1 [Zea mays]
gi|414869460|tpg|DAA48017.1| TPA: Thylakoid lumen protein isoform 2 [Zea mays]
Length = 256
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 113/222 (50%), Positives = 153/222 (68%), Gaps = 15/222 (6%)
Query: 51 KQEQEDDARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAAND------- 103
++ Q+ A T+ R ++ +R ++ + F+A + P + A++
Sbjct: 34 RRLQQAAATTVCHCRSARVEEGLLGRRDALLLGIVFSAATPPLLAPAGALADEATAESQE 93
Query: 104 -LRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASS-SSVSVVITGLGPDFTR 161
Y DE NKF I +PQ W +GAGE +G KS+TAFYP++A++ S+VSV ITG+GPDFT
Sbjct: 94 GFTTYEDEANKFSIQVPQGWLVGAGEASGIKSVTAFYPEQAATDSNVSVAITGIGPDFTS 153
Query: 162 MESFGKVEAFADTLVSGLDRSWRRPPGVAAKLID-----WFYYIEYTLQNPGESRKHLFS 216
++SFG V+AFA+ LV+GLDRSW+RPPG+AAKLID YY+EYTLQNPGE R+H+ S
Sbjct: 154 LKSFGDVDAFAEGLVNGLDRSWQRPPGLAAKLIDSRAANGLYYLEYTLQNPGERRRHIVS 213
Query: 217 AIGMASNGWYNRLYTVTGQFV-EEESEKYGSNIEKAVASFRF 257
AIGMA NGWYNRLYTVTGQ++ +++SEKY IEKAV SFR
Sbjct: 214 AIGMAFNGWYNRLYTVTGQYIDDDDSEKYRPQIEKAVGSFRL 255
>gi|116784465|gb|ABK23352.1| unknown [Picea sitchensis]
Length = 256
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/196 (54%), Positives = 143/196 (72%), Gaps = 10/196 (5%)
Query: 73 SRTKRREVMFQLAFTACSFPAIVSYALAAN-----DLRVYTDELNKFEISIPQDWQLGAG 127
SR RR+ + Q+A + P VS A AA D +Y DE +KF + +P+DW G G
Sbjct: 61 SRNGRRQAICQIAALFSAIPCTVSAARAAETELQEDYELYKDETDKFSLLVPRDWIKGEG 120
Query: 128 EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPP 187
+ +G +++TAFYP+ S+V+V+ITGL D+T+MESFG V+AFA+TLV+ LDRSW+RPP
Sbjct: 121 KTDGQRAVTAFYPESGIVSNVNVIITGLSADYTKMESFGTVDAFAETLVNSLDRSWKRPP 180
Query: 188 GVAAKLI-----DWFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESE 242
G AAKL+ + YYIEY+LQ PGES+ HL SAIGMA NGWYNRLYTVTGQ++E+++
Sbjct: 181 GQAAKLLNAKSKNGLYYIEYSLQKPGESKIHLLSAIGMAMNGWYNRLYTVTGQYLEDDAG 240
Query: 243 KYGSNIEKAVASFRFI 258
KYGS IEK+++SFR +
Sbjct: 241 KYGSKIEKSISSFRLV 256
>gi|357141874|ref|XP_003572377.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Brachypodium distachyon]
Length = 352
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 111/197 (56%), Positives = 141/197 (71%), Gaps = 15/197 (7%)
Query: 76 KRREVMFQLAFTACSFPAIVS--------YALAANDLRVYTDELNKFEISIPQDWQLGAG 127
+RR+ + + F+A + + S A Y DE NKF I +PQ WQ+GAG
Sbjct: 155 RRRDALLGVVFSAGTATLLASPAGALAEAAAEVQEGFSEYQDEANKFSIVVPQGWQMGAG 214
Query: 128 EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPP 187
E +GFK++TAF+P +A+ SSVSVVITG+GPDFT ++SFG V+AFA+ LV+GLDRSW+RP
Sbjct: 215 EGSGFKNVTAFFPDKAADSSVSVVITGIGPDFTSLKSFGDVDAFAENLVTGLDRSWQRPA 274
Query: 188 GVAAKLID-----WFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVE--EE 240
GV AKLID YYIEYTLQNPG+ R+H+ SAIGMA NGWYNRLYTVTGQ++E EE
Sbjct: 275 GVTAKLIDSRASNGMYYIEYTLQNPGDKRRHIVSAIGMAFNGWYNRLYTVTGQYIEDDEE 334
Query: 241 SEKYGSNIEKAVASFRF 257
S K+ IEK+V SF+F
Sbjct: 335 SVKFKPQIEKSVKSFKF 351
>gi|25373339|pir||C96792 unknown protein F14G6.5 [imported] - Arabidopsis thaliana
gi|6554474|gb|AAF16656.1|AC012394_5 unknown protein; 20843-19352 [Arabidopsis thaliana]
gi|12323974|gb|AAG51945.1|AC015450_6 unknown protein; 20920-22411 [Arabidopsis thaliana]
Length = 220
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/259 (50%), Positives = 155/259 (59%), Gaps = 50/259 (19%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKGTNQYKKQFVFCCKKQEQED--DARTLNRFRIEE 68
MA+ISP W P +FSN + T ++ C D+ + RI
Sbjct: 1 MAAISP---WLSSPQ-----SFSNPRVTITDSRR---CSSISAAISVLDSSNEEQHRISS 49
Query: 69 QDDDSRTKRREVMFQLAFTACSFPAIVSYALAAND----LRVYTDELNKFEISIPQDWQL 124
+D KRR+VM Q+A + P +S A A + RVYTDE NKFEISIPQ
Sbjct: 50 RDHVG-MKRRDVMLQIASSVFFLPLAISPAFAETNASEAFRVYTDETNKFEISIPQ---- 104
Query: 125 GAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWR 184
VS+ ITGLGPDFTRMESFGKVEAFA+TLVSGLDRSW+
Sbjct: 105 -----------------------VSIAITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQ 141
Query: 185 RPPGVAAKLID-----WFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEE 239
+P GV AKLID FYYIEYTLQNPGE+RKHL+SAIGMA+NGWYNRLYTVTGQF +E
Sbjct: 142 KPVGVTAKLIDSRASKGFYYIEYTLQNPGEARKHLYSAIGMATNGWYNRLYTVTGQFTDE 201
Query: 240 ESEKYGSNIEKAVASFRFI 258
ES + S I+K V SFRFI
Sbjct: 202 ESAEQSSKIQKTVKSFRFI 220
>gi|326518660|dbj|BAJ88359.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 287
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/198 (56%), Positives = 141/198 (71%), Gaps = 16/198 (8%)
Query: 76 KRREVMFQL---AFTACSFPAIV------SYALAANDLRVYTDELNKFEISIPQDWQLGA 126
KRR+ + + A A S P +V A A Y DE NKF ++IPQ WQ+GA
Sbjct: 89 KRRDALLGVLLSATAASSAPLLVPAEAFAEAAEAQEGFTAYEDEANKFTLAIPQGWQVGA 148
Query: 127 GEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRP 186
GE +GFK++TAF+P++ +SSVSVVITG+GPDFT ++SFG V+ FA+ LV+GLDRSW+RP
Sbjct: 149 GERSGFKNVTAFFPEQNPNSSVSVVITGIGPDFTSLKSFGNVDEFAENLVTGLDRSWQRP 208
Query: 187 PGVAAKLID-----WFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFV--EE 239
G+ AKLID YYIEYTLQNPGE R+H+ SAIGMA NGWYNRLYTVTGQ++ +E
Sbjct: 209 AGLTAKLIDSKAANGLYYIEYTLQNPGEKRRHIVSAIGMAFNGWYNRLYTVTGQYIDDDE 268
Query: 240 ESEKYGSNIEKAVASFRF 257
+S Y IEK+V SF+F
Sbjct: 269 DSAIYKPEIEKSVKSFKF 286
>gi|242082241|ref|XP_002445889.1| hypothetical protein SORBIDRAFT_07g027500 [Sorghum bicolor]
gi|241942239|gb|EES15384.1| hypothetical protein SORBIDRAFT_07g027500 [Sorghum bicolor]
Length = 253
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/160 (64%), Positives = 129/160 (80%), Gaps = 8/160 (5%)
Query: 106 VYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASS-SSVSVVITGLGPDFTRMES 164
Y DE NKF I +PQ W +GAGE +G KS+TAFYP++A++ S+VSV ITG+GPDFT ++S
Sbjct: 93 TYEDEANKFSIQVPQGWLVGAGEASGIKSVTAFYPEQAAADSNVSVAITGIGPDFTSLKS 152
Query: 165 FGKVEAFADTLVSGLDRSWRRPPGVAAKLID-----WFYYIEYTLQNPGESRKHLFSAIG 219
FG V++FA+ LV+GLDRSW+RPPG+AAKLID YY+EYTLQNPGE R+H+ SAIG
Sbjct: 153 FGDVDSFAEGLVNGLDRSWQRPPGLAAKLIDSRAANGLYYLEYTLQNPGERRRHIVSAIG 212
Query: 220 MASNGWYNRLYTVTGQFV--EEESEKYGSNIEKAVASFRF 257
MA NGWYNRLYTVTGQ++ +++SEKY IEKAV SFR
Sbjct: 213 MAFNGWYNRLYTVTGQYIDDDDDSEKYRPQIEKAVRSFRL 252
>gi|326512572|dbj|BAJ99641.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 111/198 (56%), Positives = 141/198 (71%), Gaps = 16/198 (8%)
Query: 76 KRREVMFQL---AFTACSFPAIV------SYALAANDLRVYTDELNKFEISIPQDWQLGA 126
KRR+ + + A A S P +V A A Y DE NKF ++IPQ WQ+GA
Sbjct: 46 KRRDALLGVLLSATAASSAPLLVPAEAFAEAAEAQEGFTAYEDEANKFTLAIPQGWQVGA 105
Query: 127 GEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRP 186
GE +GFK++TAF+P++ +SSVSVVITG+GPDFT ++SFG V+ FA+ LV+GLDRSW+RP
Sbjct: 106 GERSGFKNVTAFFPEQNPNSSVSVVITGIGPDFTSLKSFGNVDEFAENLVTGLDRSWQRP 165
Query: 187 PGVAAKLID-----WFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFV--EE 239
G+ AKLID YYIEYTLQNPGE R+H+ SAIGMA NGWYNRLYTVTGQ++ +E
Sbjct: 166 AGLTAKLIDSKAANGLYYIEYTLQNPGEKRRHIVSAIGMAFNGWYNRLYTVTGQYIDDDE 225
Query: 240 ESEKYGSNIEKAVASFRF 257
+S Y IEK+V SF+F
Sbjct: 226 DSAIYKPEIEKSVKSFKF 243
>gi|326501564|dbj|BAK02571.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 167
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/165 (61%), Positives = 128/165 (77%), Gaps = 7/165 (4%)
Query: 100 AANDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDF 159
A Y DE NKF ++IPQ WQ+GAGE +GFK++TAF+P++ +SSVSVVITG+GPDF
Sbjct: 2 AQEGFTAYEDEANKFTLAIPQGWQVGAGERSGFKNVTAFFPEQNPNSSVSVVITGIGPDF 61
Query: 160 TRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLID-----WFYYIEYTLQNPGESRKHL 214
T ++SFG V+ FA+ LV+GLDRSW+RP G+ AKLID YYIEYTLQNPGE R+H+
Sbjct: 62 TSLKSFGNVDEFAENLVTGLDRSWQRPAGLTAKLIDSKAANGLYYIEYTLQNPGEKRRHI 121
Query: 215 FSAIGMASNGWYNRLYTVTGQFV--EEESEKYGSNIEKAVASFRF 257
SAIGMA NGWYNRLYTVTGQ++ +E+S Y IEK+V SF+F
Sbjct: 122 VSAIGMAFNGWYNRLYTVTGQYIDDDEDSAIYKPEIEKSVKSFKF 166
>gi|215274041|gb|ACJ64918.1| unknown [Arachis diogoi]
Length = 110
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 87/110 (79%), Positives = 99/110 (90%), Gaps = 5/110 (4%)
Query: 154 GLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDW-----FYYIEYTLQNPG 208
G+GPDFT+MESFGKVE FA+TL+ GLDRSW+RPPGVAAKLID FYYIEY+LQNPG
Sbjct: 1 GVGPDFTKMESFGKVEEFAETLIGGLDRSWQRPPGVAAKLIDCKSSKGFYYIEYSLQNPG 60
Query: 209 ESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRFI 258
ESR+ L+SAIGMASNGWYNRLYTVTGQFVEEE++KY S ++KAVASFRFI
Sbjct: 61 ESRRTLYSAIGMASNGWYNRLYTVTGQFVEEETDKYASKVKKAVASFRFI 110
>gi|168003549|ref|XP_001754475.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694577|gb|EDQ80925.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 255
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 125/192 (65%), Gaps = 9/192 (4%)
Query: 76 KRREVMFQ-LAFTACSFPAIVSYAL---AANDLRVYTDELNKFEISIPQDWQLGAGEPNG 131
+RREV+ Q L + SF A AA + Y D +KF + +PQ W G G+ +G
Sbjct: 64 QRREVIGQALLAMSMSFAPPARSATDTDAATEFTTYEDAADKFTLLVPQAWNRGEGKTSG 123
Query: 132 FKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAA 191
+ +TAFYP + ++V++VITGLG DFT + SFG + FA+ LV+ LDRSW++PPG A
Sbjct: 124 QRKVTAFYPADGGLTNVNIVITGLGADFTSLGSFGTADNFAENLVNSLDRSWQKPPGQKA 183
Query: 192 KLIDW-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGS 246
+L+D YY+EYT+Q GE ++HL S +G+ +NGW NRLYTVTGQ+ EE+S KY
Sbjct: 184 RLVDCKSRADKYYVEYTIQRLGEQQRHLVSVVGIGNNGWVNRLYTVTGQYFEEDSAKYKQ 243
Query: 247 NIEKAVASFRFI 258
+I K ++SF+ +
Sbjct: 244 DINKIISSFKIL 255
>gi|302818180|ref|XP_002990764.1| hypothetical protein SELMODRAFT_448162 [Selaginella moellendorffii]
gi|300141502|gb|EFJ08213.1| hypothetical protein SELMODRAFT_448162 [Selaginella moellendorffii]
Length = 221
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 113/165 (68%), Gaps = 7/165 (4%)
Query: 99 LAANDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPD 158
AA++ +VY +E +KF +++P+DW G G+ G + + AF+P +A+ +V+V+IT LG D
Sbjct: 57 FAADEYQVY-EEQDKFSLTVPKDWIKGEGK-AGSRRVVAFHPSKATFPNVNVIITNLGAD 114
Query: 159 FTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLI-----DWFYYIEYTLQNPGESRKH 213
FT + S G V+AFA ++V +DRS++RPPG AA+L+ + YY++YT+Q PGE+++H
Sbjct: 115 FTGIGSLGSVDAFAASVVGSMDRSYKRPPGTAARLVNAVSRNGMYYLDYTVQTPGEAQRH 174
Query: 214 LFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRFI 258
FS G+ +Y +LYT TGQ+ E + ++ +++A+ SFR +
Sbjct: 175 FFSVAGVGETQFYKQLYTATGQYWEADGDRDRKALQEAIESFRIV 219
>gi|413953068|gb|AFW85717.1| hypothetical protein ZEAMMB73_055926 [Zea mays]
Length = 277
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 87/131 (66%), Gaps = 20/131 (15%)
Query: 106 VYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASS-SSVSVVITGLGPDFTRMES 164
Y DE NKF I +PQ W +GAGE +G KS+TAFYP++A++ S+VSV I +GPDFT ++S
Sbjct: 129 TYEDEANKFNIQVPQGWLVGAGEASGIKSVTAFYPEQAATDSNVSVAIIEIGPDFTSLKS 188
Query: 165 FGKVEAFADTLVSGLDRSWRRPPGVAAKLIDWFYYIEYTLQNPGESRKHLFSAIGMASNG 224
FG V AFA+ LV YY+EYT QNPGE R+H+ SAIGMA NG
Sbjct: 189 FGDVAAFAEGLVR-------------------LYYLEYTSQNPGERRRHIVSAIGMAFNG 229
Query: 225 WYNRLYTVTGQ 235
WYNRLY TGQ
Sbjct: 230 WYNRLYIATGQ 240
>gi|116782591|gb|ABK22563.1| unknown [Picea sitchensis]
Length = 208
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 96/143 (67%), Gaps = 10/143 (6%)
Query: 73 SRTKRREVMFQLAFTACSFPAIVSYALAAN-----DLRVYTDELNKFEISIPQDWQLGAG 127
SR RR+ + Q+A + P VS A AA D +Y DE +KF + +P+DW G G
Sbjct: 61 SRNGRRQAICQIAALFSAIPCTVSAARAAETELQEDYELYKDETDKFSLLVPRDWIKGEG 120
Query: 128 EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPP 187
+ +G +++TAFYP+ S+V+V+ITGL D+T+MES G V+AFA+TLV+ LDRSW+RPP
Sbjct: 121 KTDGQRAVTAFYPESGIVSNVNVIITGLSADYTKMESLGTVDAFAETLVNSLDRSWKRPP 180
Query: 188 GVAAKLI-----DWFYYIEYTLQ 205
G AAKL+ + YYIEY+LQ
Sbjct: 181 GQAAKLLNAKSKNGLYYIEYSLQ 203
>gi|356577616|ref|XP_003556920.1| PREDICTED: LOW QUALITY PROTEIN: psbP domain-containing protein 3,
chloroplastic-like [Glycine max]
Length = 113
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/97 (71%), Positives = 80/97 (82%), Gaps = 2/97 (2%)
Query: 100 AANDLRVYTDELNKFEISIPQDWQLGA--GEPNGFKSITAFYPQEASSSSVSVVITGLGP 157
+ D+RVYT+ NKF+I IPQ+WQ+G GE +GFKSITAFYP AS+S+VSVVITGLGP
Sbjct: 14 VSEDVRVYTENENKFKIEIPQEWQVGTRDGESSGFKSITAFYPTVASNSNVSVVITGLGP 73
Query: 158 DFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLI 194
+FTRMESFGKV FA TLVSGLD S R+P GVAAKLI
Sbjct: 74 NFTRMESFGKVGEFAQTLVSGLDGSXRKPSGVAAKLI 110
>gi|357467181|ref|XP_003603875.1| PsbP domain-containing protein [Medicago truncatula]
gi|355492923|gb|AES74126.1| PsbP domain-containing protein [Medicago truncatula]
Length = 174
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 84/110 (76%), Gaps = 4/110 (3%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAANDLR----VYTDELNKFEISIPQDWQLGAGEPNGF 132
RR+++ + A + + S ALA ND+ +YTD+ NKF+I IPQ+WQ+G GE GF
Sbjct: 51 RRQLILYTSTAAIAASSTDSNALALNDVSEDFSIYTDDENKFKIDIPQEWQIGTGESAGF 110
Query: 133 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRS 182
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLV LD++
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVLFLDQN 160
>gi|414869461|tpg|DAA48018.1| TPA: hypothetical protein ZEAMMB73_646546 [Zea mays]
gi|414869462|tpg|DAA48019.1| TPA: hypothetical protein ZEAMMB73_646546 [Zea mays]
Length = 178
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 82/135 (60%), Gaps = 9/135 (6%)
Query: 51 KQEQEDDARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAAND------- 103
++ Q+ A T+ R ++ +R ++ + F+A + P + A++
Sbjct: 34 RRLQQAAATTVCHCRSARVEEGLLGRRDALLLGIVFSAATPPLLAPAGALADEATAESQE 93
Query: 104 -LRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASS-SSVSVVITGLGPDFTR 161
Y DE NKF I +PQ W +GAGE +G KS+TAFYP++A++ S+VSV ITG+GPDFT
Sbjct: 94 GFTTYEDEANKFSIQVPQGWLVGAGEASGIKSVTAFYPEQAATDSNVSVAITGIGPDFTS 153
Query: 162 MESFGKVEAFADTLV 176
++SFG V+AFA+ LV
Sbjct: 154 LKSFGDVDAFAEGLV 168
>gi|307103403|gb|EFN51663.1| hypothetical protein CHLNCDRAFT_139877 [Chlorella variabilis]
Length = 295
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 88/183 (48%), Gaps = 32/183 (17%)
Query: 106 VYTDELNKFEISIPQDWQLGAG----------------EPNGFKSITAFYPQEASSSSVS 149
VYTD +KF I +P W L G G + + AF P++ SV+
Sbjct: 107 VYTDPEDKFSIEVPSGWALATGAFGEEGTLTTNQARFSNAAGLRRVVAFLPEDKPEVSVA 166
Query: 150 VVITGLGPDFTRMESFGKVEAFADTLVSGLDRS-------WRR---PPGVAAKLIDWF-- 197
V I LG D+T + SFG + FA +V+ +D S WRR PP AKL+D
Sbjct: 167 VTIQFLGADYTGLGSFGTAQDFATGVVNKMDNSYILKLPEWRRAKEPPVQVAKLLDVKDV 226
Query: 198 ----YYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVA 253
Y YTL GE+++ ++ A+ + +NG NR YTV + E+YG ++K V
Sbjct: 227 DKRQYMFAYTLAKEGEAQRTVYQAVAVGNNGRTNRFYTVNASCAGADVEQYGPVLQKIVE 286
Query: 254 SFR 256
SFR
Sbjct: 287 SFR 289
>gi|159480798|ref|XP_001698469.1| hypothetical protein CHLREDRAFT_205923 [Chlamydomonas reinhardtii]
gi|158282209|gb|EDP07962.1| predicted protein [Chlamydomonas reinhardtii]
Length = 258
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 93/175 (53%), Gaps = 26/175 (14%)
Query: 107 YTDELNKFEISIPQDWQLGAGEPNGFKSIT---------AFYPQEASSSSVSVVIT--GL 155
YTD + F + IP +W G G+ +G S + A++P+ S V+V IT +
Sbjct: 77 YTDPQDAFTLKIPANWGFGEGQLSGNSSFSGASGARRTLAWFPENVSPRDVNVTITVTNV 136
Query: 156 GPDFTRMESFGKVEAFADTLVSGLDRSW---------RRPPGVAAKLIDWF-----YYIE 201
+FT++ SFG FA LV+ DRS+ R P + AKLID Y++E
Sbjct: 137 SVEFTKLGSFGTPLQFASNLVNSQDRSYMLRGPEWARRNEPIMVAKLIDAGEISNKYFLE 196
Query: 202 YTLQN-PGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASF 255
YTLQ P E ++HL++A+ + NG YNRLY+VT Q +EE +Y + + V S
Sbjct: 197 YTLQKVPDEPKRHLYTAVALGYNGTYNRLYSVTAQSLEELKPQYEATLLAMVKSL 251
>gi|255083562|ref|XP_002504767.1| oxygen-evolving enhancer PsbP [Micromonas sp. RCC299]
gi|226520035|gb|ACO66025.1| oxygen-evolving enhancer PsbP [Micromonas sp. RCC299]
Length = 248
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 61 LNRFRIEEQDDDSRTKRREVMFQLAFTACS---FPAIVSYALAANDL-RVYTDELNKFEI 116
++R R E D S +RRE++ A + S FP + A L +VY DE +K+ +
Sbjct: 32 VSRTRAEASADGS-LERRELLAGAATSLVSIAAFPRVARADEPATTLTQVYNDEEDKYSL 90
Query: 117 SIPQDWQLGAGE----PNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFA 172
++P DW+ G+ P + + AFYP +V+VV T LG D+ +M SFG + FA
Sbjct: 91 AVPSDWERALGDTSPNPQSTRKVIAFYPPGQPEINVNVVATALGADYPKMGSFGSPDEFA 150
Query: 173 DTLVSGLDRS-WRRPPG-----VAAKLIDWFYYIEYTLQNPGES-RKHLFSAIGMASNGW 225
+ +G+ R R+ P V AK Y IEYT++ P E+ +HL SA+G+ NG
Sbjct: 151 YGVAAGMTRPKPRQGPKQFSYVVDAKNAGDRYVIEYTVERPEENFYQHLLSAVGIGYNGR 210
Query: 226 YNRLYTVTGQFVEEESEKYGSNIEKAVASF 255
NRL+T+T E+ + K A+F
Sbjct: 211 VNRLFTLTAVCPEDRYAEMEPMFRKIFATF 240
>gi|384245846|gb|EIE19338.1| hypothetical protein COCSUDRAFT_58632 [Coccomyxa subellipsoidea
C-169]
Length = 191
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 80/137 (58%), Gaps = 11/137 (8%)
Query: 131 GFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGV- 189
G + A+YP+ + ++V+V++T +G D+T + SFG ++F + L++ LDRS+ G+
Sbjct: 49 GTRRALAWYPEGGTDTNVTVLVTNVGADYTALGSFGSADSFGENLIASLDRSFLLRGGMN 108
Query: 190 ----AAKLID-----WFYYIEYTLQNPGE-SRKHLFSAIGMASNGWYNRLYTVTGQFVEE 239
AKL+D Y++EYT+Q P E +H SA+ + NG YNR YT+T Q E
Sbjct: 109 RPQSRAKLLDAKSRSGMYFLEYTVQKPEEIEPRHFLSAVALGFNGRYNRFYTLTAQCPEA 168
Query: 240 ESEKYGSNIEKAVASFR 256
+ Y + +E V SFR
Sbjct: 169 DLSTYRATLEGVVNSFR 185
>gi|303283586|ref|XP_003061084.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457435|gb|EEH54734.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 265
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)
Query: 107 YTDELNKFEISIPQDWQLGAG----EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRM 162
Y D +K+ S+P DW+ G P + +TA++P +V+VV T LG D+ +M
Sbjct: 98 YVDAEDKYSFSVPADWEQAIGTTDDNPQSSRRVTAYFPPGDPDINVNVVCTALGADYPKM 157
Query: 163 ESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDWF---------YYIEYTLQNPGES-RK 212
SFG + FA + +G+ R P K + Y+IEYT++ P E +
Sbjct: 158 GSFGSPDEFAFGVAAGMTRPK---PKSGPKQFSYVLNAKSKGDKYFIEYTVERPSEDFYQ 214
Query: 213 HLFSAIGMASNGWYNRLYTVTGQFVEEE 240
HL S +G+ NG +RL T T E++
Sbjct: 215 HLMSVVGVGYNGRVSRLITATAVCPEDK 242
>gi|412985511|emb|CCO18957.1| predicted protein [Bathycoccus prasinos]
Length = 319
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 107 YTDELNKFEISIPQD-WQL------GAGEPNGFKSITAFYPQEASSSSV--SVVITGLGP 157
YTDE+ KF +S P D WQL G+G+ +G + + AF P+ A+ V S+V T +G
Sbjct: 144 YTDEVLKFSLSYPTDSWQLLVGETGGSGDRSGSRQVIAFAPKNANPKDVNISLVATPVGA 203
Query: 158 DFTRMESFGKVEAFADTLVSGLDR----SWRRPPGVAAKLID-----WFYYIEYTLQNP- 207
D+ +M SFG F +V+ +++ R ++LI+ Y++EY L P
Sbjct: 204 DYPKMGSFGSPFEFGYNMVNPMNKPKAKKGREDEVQYSELIEAGSKGLNYFVEYELTRPS 263
Query: 208 -GESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASF 255
G K L A G+ +G + LY+ T Q + E EK+ IEK + S
Sbjct: 264 TGIDSKQLVVA-GIGYDGRVSHLYSTTAQMPKGEEEKWRPEIEKILESL 311
>gi|308799735|ref|XP_003074648.1| thylakoid lumen protein, chloroplast prec (ISS) [Ostreococcus
tauri]
gi|116000819|emb|CAL50499.1| thylakoid lumen protein, chloroplast prec (ISS) [Ostreococcus
tauri]
Length = 195
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 98 ALAANDLRVYTDELNKFEISIPQDWQLGAGE--------PNGFKSI-TAFYPQEASSSSV 148
A A LR Y D+ +F + P DW + G G + + T P +V
Sbjct: 11 ARADESLRTYADDELRFTLEYPSDWVVATGSLERSENPMGGGARDVWTISPPGRTRDVNV 70
Query: 149 SVVITGLGPDFTRMESFGKVEAFADTLVSGLDR----SWRRPPGVAAKLIDW-----FYY 199
+VV T G DFT+M S G F LV+ L R R A+L+D +Y
Sbjct: 71 TVVATPAGADFTKMGSLGDAYGFGMGLVAPLHRPKLKKGREDRVQRAELVDAYGKGDYYK 130
Query: 200 IEYTLQNPGESRKHLFSAI-GMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRF 257
+EYT + P +F + G+ +G LYT T QF E K+ + IE V S ++
Sbjct: 131 VEYTFERPAADIDSVFLVLAGLGYDGRVGHLYTTTAQFPRAEESKWRAQIEAIVDSVKY 189
>gi|302849364|ref|XP_002956212.1| hypothetical protein VOLCADRAFT_97118 [Volvox carteri f.
nagariensis]
gi|300258515|gb|EFJ42751.1| hypothetical protein VOLCADRAFT_97118 [Volvox carteri f.
nagariensis]
Length = 205
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 34/165 (20%)
Query: 100 AANDLRVYTDELNKFEISIPQDWQLGAGE---------PNGFKSITAFYPQEASSSSVSV 150
A + L YTD + F +++P W G GE +G + + P+ A+ V+V
Sbjct: 21 ATSVLSRYTDPQDGFTLAVPPGWVFGEGELPGNSSFSGASGARRTLVWIPEGANPRDVNV 80
Query: 151 VITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDWFYYIEYTLQNPGES 210
+ T + K LV + S R Y++EYT+Q E
Sbjct: 81 TLV-----ITNVSVVAK-------LVDATELSGR-------------YFVEYTVQKLPEP 115
Query: 211 RKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASF 255
++HL+S + + NG YNRLYT+T Q +E + +Y + + V S
Sbjct: 116 QRHLYSLLALGYNGMYNRLYTITAQTLEGDRPQYEAALLSMVKSL 160
>gi|145341129|ref|XP_001415667.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575890|gb|ABO93959.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 192
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 22/175 (12%)
Query: 104 LRVYTDELNKFEISIPQDWQLGAGEP--------NGFKSITAFYPQEASSSSVSVVI--T 153
L Y D+ KF++ P DW GE G + + P A++ V+V I T
Sbjct: 13 LTTYEDDKLKFKVQYPSDWTTSTGETPASEEILGGGARDLFTISPPGANARDVNVTIVAT 72
Query: 154 GLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVA-----AKLIDW-----FYYIEYT 203
G DFT+M S G F LV L++ R G A+LID +Y +EY
Sbjct: 73 PAGADFTKMGSLGDAYGFGYGLVVPLNKP-RAKKGQEDRIQFAELIDSVGKGDYYKVEYK 131
Query: 204 LQNPGESRKHLFSAI-GMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRF 257
P +F + G+ +G + LYT T Q+ E +K+ + +E + S +
Sbjct: 132 FAKPSTGINSIFFVLAGLGYDGRVSHLYTATAQYPRAEEDKWRAQVEAIIDSVVY 186
>gi|414869463|tpg|DAA48020.1| TPA: hypothetical protein ZEAMMB73_646546 [Zea mays]
Length = 40
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
Query: 220 MASNGWYNRLYTVTGQFV-EEESEKYGSNIEKAVASFRF 257
MA NGWYNRLYTVTGQ++ +++SEKY IEKAV SFR
Sbjct: 1 MAFNGWYNRLYTVTGQYIDDDDSEKYRPQIEKAVGSFRL 39
>gi|298709150|emb|CBJ31094.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 230
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 105 RVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMES 164
+ +TD+ F +P W+ E +G + I + ++ V T DFT + S
Sbjct: 80 QTFTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSPTTPGANAFVAYTPARGDFTTLGS 139
Query: 165 FGKVEAFADTLVSGLDRSWRRPPGVAAKLIDWF-----YYIEYTLQNPGESRKHLFSA-I 218
FG ++ + T++ GV++++++ + Y +Y + G KH+ + +
Sbjct: 140 FGTLDEVSKTVLP-------EASGVSSRMLESYTYKNSYVYDYIVDQEGRPEKHIKTMWV 192
Query: 219 GMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVAS 254
G +L T+T Q E + K G I+ +AS
Sbjct: 193 LFPEQG---QLATITAQCNESDYAKVGKTIDSLIAS 225
>gi|255542694|ref|XP_002512410.1| conserved hypothetical protein [Ricinus communis]
gi|223548371|gb|EEF49862.1| conserved hypothetical protein [Ricinus communis]
Length = 268
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 135 ITAFYPQEASSS-SVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKL 193
+ AF P +S +VSV+++ + PDF+ +E+FG E + +V + S RR P V L
Sbjct: 139 VVAFGPPGSSGELNVSVIVSPVPPDFS-IEAFGGPEEVGEAVVKTITASGRR-PDVKGSL 196
Query: 194 IDW-----------FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESE 242
+ +Y +E+ +++P R ++ A+ +G RLYT+ Q E +
Sbjct: 197 VQSRLREDSLRNVNYYELEFRVESPSFQRHNV--AVCCTRDG---RLYTLNAQAPESAWQ 251
Query: 243 KYGSNIEKAVASFRFI 258
K + + SF +
Sbjct: 252 KVSPDFSRIAESFTLL 267
>gi|226531512|ref|NP_001142529.1| uncharacterized protein LOC100274771 [Zea mays]
gi|195605962|gb|ACG24811.1| hypothetical protein [Zea mays]
Length = 282
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 68/128 (53%), Gaps = 22/128 (17%)
Query: 126 AGEPNGFKSIT----AFYPQEASSS-SVSVVITGLGPDFTRMESFGKVEAFADTLVSGLD 180
G P+G ++I+ AF P ++ +VSV+++ + DF+ +E+FG + + ++ +
Sbjct: 139 GGSPSGPRNISEPVAAFGPPGSNGELNVSVIVSTVPRDFS-IETFGSPKDVGEVVLRRIA 197
Query: 181 RSWRRPPGVAAKLIDW----------FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLY 230
R+ RR PG+ A LID +Y +E+ +++P R ++ A+ +G RLY
Sbjct: 198 RT-RRSPGINATLIDAAVREDAGRVKYYKLEFRVESPSFRRHNV--AVCCVRDG---RLY 251
Query: 231 TVTGQFVE 238
T+ Q E
Sbjct: 252 TMNAQAPE 259
>gi|335046123|ref|ZP_08539146.1| putative membrane protein [Oribacterium sp. oral taxon 108 str.
F0425]
gi|333759909|gb|EGL37466.1| putative membrane protein [Oribacterium sp. oral taxon 108 str.
F0425]
Length = 343
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 51 KQEQEDDARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAANDL----RV 106
K E++ R + + QDD SR K+RE +F + F CSF A++ +A N +
Sbjct: 4 KDSTEENRRMPENYHL--QDDASRKKKRERIFTVLFLFCSFCALMIFAFYVNRHIHIKAL 61
Query: 107 YTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPD 158
Y D+L F QD+ P G + F P + S + +V G P+
Sbjct: 62 YMDDLYLFSFFREQDF-FTFSFPIG--NAVRFRPVYWAISYIEMVFVGNDPN 110
>gi|363896506|ref|ZP_09323057.1| hypothetical protein HMPREF9624_01801 [Oribacterium sp. ACB7]
gi|361960792|gb|EHL14025.1| hypothetical protein HMPREF9624_01801 [Oribacterium sp. ACB7]
Length = 613
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 51 KQEQEDDARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAANDL----RV 106
K E++ R + + QDD SR K+RE +F + F CSF A++ +A N +
Sbjct: 4 KDSTEENRRMPENYHL--QDDASRKKKRERIFTVLFLFCSFCALMIFAFYVNRHIHIKAL 61
Query: 107 YTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPD 158
Y D+L F QD+ P G + F P + S + +V G P+
Sbjct: 62 YMDDLYLFSFFREQDF-FTFSFPIG--NAVRFRPVYWALSYIEMVFVGNDPN 110
>gi|428171810|gb|EKX40724.1| hypothetical protein GUITHDRAFT_113254 [Guillardia theta CCMP2712]
Length = 222
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 107 YTDELNKFEISIPQDWQLGAGE-PNGFKS-----ITAFYPQEASSSSVSVVITGLGPDFT 160
Y D+ FE +PQ W G E P G ++ I +F + ++++V + PD++
Sbjct: 64 YADDARGFEFQVPQGWIQGEAEFPGGNRNPARPKIISFRSPTSDDFNIALVSYSIQPDYS 123
Query: 161 RMESFGKVEAFADTLV 176
++ SFG +E A ++
Sbjct: 124 KLGSFGTIEDVAKNII 139
>gi|242055511|ref|XP_002456901.1| hypothetical protein SORBIDRAFT_03g045040 [Sorghum bicolor]
gi|241928876|gb|EES02021.1| hypothetical protein SORBIDRAFT_03g045040 [Sorghum bicolor]
Length = 279
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 28/185 (15%)
Query: 74 RTKRREVMFQLA-FTAC-----SFPAIVSYALAANDLRVYTDELNKFEISI---PQDWQL 124
R+ R +V++ + FT C F I + + +Y E+ K E+ P
Sbjct: 80 RSLRLDVLYPVGGFTRCLDSDNGFEFIYPSSWVGDQTLLYR-EVKKAELQRSLDPPPLPN 138
Query: 125 GAGEPNGFKSITAFYPQEASSS-SVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSW 183
G N + + AF P +S +VSV+++ + DF+ +E+FG + + ++ + R+
Sbjct: 139 GKSPRNISEPVAAFGPPGSSGELNVSVIVSPVPRDFS-IEAFGSPKDVGEVVLRRIART- 196
Query: 184 RRPPGVAAKLIDW----------FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVT 233
RR P + A LID +Y +E+ +++P R ++ A+ A +G +LYT+
Sbjct: 197 RRSPDINATLIDAALREDADSVKYYKLEFRVESPSFQRHNV--AVCCARDG---KLYTMN 251
Query: 234 GQFVE 238
Q E
Sbjct: 252 AQAPE 256
>gi|414878822|tpg|DAA55953.1| TPA: hypothetical protein ZEAMMB73_857058 [Zea mays]
Length = 283
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 22/128 (17%)
Query: 126 AGEPNGFKSIT----AFYPQEASSS-SVSVVITGLGPDFTRMESFGKVEAFADTLVSGLD 180
G P+G ++I+ AF P ++ +VSV+++ + DF+ +E+FG + + ++ +
Sbjct: 140 GGSPSGPRNISEPVAAFGPPGSNGELNVSVIVSTVPRDFS-IETFGSPKDVGEVVLRRIA 198
Query: 181 RSWRRPPGVAAKLIDW----------FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLY 230
R+ RR P + A LID +Y +E+ +++P R ++ A+ +G RLY
Sbjct: 199 RT-RRSPDINATLIDAAVREDAGRVKYYKLEFRVESPSFRRHNV--AVCCVRDG---RLY 252
Query: 231 TVTGQFVE 238
T+ Q E
Sbjct: 253 TMNAQAPE 260
>gi|219115451|ref|XP_002178521.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410256|gb|EEC50186.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 223
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 11/177 (6%)
Query: 88 ACSFPAIVSYALAANDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSS 147
A FP+ + A++ L + D + F + +P W + + ++I + + +S
Sbjct: 45 AVGFPS-TAVAVSVPTLTPFLDSRHGFTVDVPSQWSRTEQQLSDRRTIVVWTDPADARAS 103
Query: 148 VSVVITGLGPDFTRMESFGKVEAFA------DTLVSGLDRSWRRPPGVAAKLIDWFYYIE 201
V V T + DFT + SFG V+ A ++G+D V+ K +F Y +
Sbjct: 104 VFVAYTPVRDDFTSLGSFGSVDQVAAQTILPKAQIAGVDVEATMLAAVSQKQAYFFDYRQ 163
Query: 202 YT--LQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEE-SEKYGSNIEKAVASF 255
+Q P R +F+ A+ G L T+T Q EE + KY S + + S+
Sbjct: 164 AVPNVQPPTHFRT-IFTLQQGATGGAGAVLVTLTAQCPEELYATKYQSLFDSILDSY 219
>gi|443716926|gb|ELU08219.1| hypothetical protein CAPTEDRAFT_197539 [Capitella teleta]
Length = 457
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 133 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADT 174
K + + P AS S + ++T +GPD TR S G+ AF+DT
Sbjct: 198 KLVLGYLPSPASDSGAASILTLVGPDSTRRMSRGRYSAFSDT 239
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.131 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,024,727,733
Number of Sequences: 23463169
Number of extensions: 165187900
Number of successful extensions: 367817
Number of sequences better than 100.0: 61
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 367685
Number of HSP's gapped (non-prelim): 65
length of query: 258
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 119
effective length of database: 9,097,814,876
effective search space: 1082639970244
effective search space used: 1082639970244
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)