Query 025063
Match_columns 258
No_of_seqs 162 out of 1154
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 09:44:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025063.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025063hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00176 galactinol synthase 100.0 3.7E-59 8E-64 399.2 21.9 248 11-258 18-265 (333)
2 cd02537 GT8_Glycogenin Glycoge 100.0 7E-42 1.5E-46 285.5 19.2 208 16-258 1-211 (240)
3 cd00505 Glyco_transf_8 Members 100.0 4.1E-38 8.9E-43 264.1 17.6 222 17-258 2-243 (246)
4 cd06914 GT8_GNT1 GNT1 is a fun 100.0 4.3E-37 9.4E-42 257.8 16.4 202 16-258 1-237 (278)
5 cd04194 GT8_A4GalT_like A4GalT 100.0 2.9E-36 6.3E-41 253.3 10.1 217 22-258 5-245 (248)
6 PRK15171 lipopolysaccharide 1, 100.0 8.5E-36 1.8E-40 259.0 11.7 224 14-258 24-269 (334)
7 COG1442 RfaJ Lipopolysaccharid 100.0 3.3E-35 7.1E-40 251.0 13.0 222 16-258 3-243 (325)
8 cd06431 GT8_LARGE_C LARGE cata 100.0 3.8E-34 8.2E-39 242.6 13.4 219 16-258 3-250 (280)
9 PF01501 Glyco_transf_8: Glyco 100.0 9E-35 1.9E-39 243.5 8.4 221 22-258 4-245 (250)
10 cd06429 GT8_like_1 GT8_like_1 100.0 1.8E-31 4E-36 223.2 12.0 196 22-258 5-239 (257)
11 cd06430 GT8_like_2 GT8_like_2 100.0 7E-31 1.5E-35 222.0 14.9 213 22-254 6-255 (304)
12 cd06432 GT8_HUGT1_C_like The C 100.0 5.3E-30 1.2E-34 214.1 12.5 217 23-257 7-243 (248)
13 PLN02718 Probable galacturonos 99.9 5.2E-27 1.1E-31 210.9 10.4 223 25-258 320-572 (603)
14 PLN02523 galacturonosyltransfe 99.9 3.5E-26 7.6E-31 203.2 13.7 226 15-258 248-528 (559)
15 PLN02867 Probable galacturonos 99.9 4.1E-25 8.8E-30 196.7 6.1 160 91-258 329-504 (535)
16 PLN02659 Probable galacturonos 99.9 6.3E-25 1.4E-29 194.7 6.3 159 92-258 329-502 (534)
17 PLN02870 Probable galacturonos 99.9 2.1E-24 4.6E-29 191.3 5.3 160 91-258 327-501 (533)
18 PLN02769 Probable galacturonos 99.9 1.5E-23 3.3E-28 189.5 10.0 150 92-258 437-599 (629)
19 PLN02742 Probable galacturonos 99.9 2E-23 4.4E-28 185.5 10.3 156 92-258 338-504 (534)
20 PLN02829 Probable galacturonos 99.9 1.3E-23 2.8E-28 188.7 6.0 154 91-258 441-608 (639)
21 PLN02910 polygalacturonate 4-a 99.9 7.1E-23 1.5E-27 183.8 5.7 153 92-258 460-626 (657)
22 COG5597 Alpha-N-acetylglucosam 99.7 1.1E-18 2.5E-23 144.0 -0.8 183 49-232 106-320 (368)
23 KOG1950 Glycosyl transferase, 98.7 1.8E-08 4E-13 89.3 5.6 162 95-256 114-284 (369)
24 PF11051 Mannosyl_trans3: Mann 98.6 2.4E-07 5.2E-12 78.7 8.1 109 16-130 2-115 (271)
25 PF03407 Nucleotid_trans: Nucl 98.4 1.9E-06 4.1E-11 70.6 8.6 173 57-256 12-204 (212)
26 KOG1879 UDP-glucose:glycoprote 97.7 0.00034 7.4E-09 68.7 10.2 193 17-229 1183-1400(1470)
27 PLN03182 xyloglucan 6-xylosylt 97.1 0.0017 3.6E-08 57.2 7.5 128 104-258 196-361 (429)
28 PF07801 DUF1647: Protein of u 96.8 0.013 2.8E-07 44.5 8.6 63 2-67 48-110 (142)
29 PF05637 Glyco_transf_34: gala 95.6 0.0065 1.4E-07 50.7 1.8 77 173-253 141-231 (239)
30 KOG1928 Alpha-1,4-N-acetylgluc 93.3 0.098 2.1E-06 45.9 3.7 72 110-217 242-316 (409)
31 PLN03181 glycosyltransferase; 92.9 0.43 9.3E-06 42.6 7.1 102 104-230 197-325 (453)
32 cd02515 Glyco_transf_6 Glycosy 92.7 0.92 2E-05 38.2 8.5 193 15-232 35-248 (271)
33 KOG4748 Subunit of Golgi manno 88.5 1.4 3E-05 38.8 6.1 143 103-253 173-332 (364)
34 KOG1950 Glycosyl transferase, 82.4 0.73 1.6E-05 41.1 1.6 35 93-127 151-185 (369)
35 PF03314 DUF273: Protein of un 77.8 7.4 0.00016 31.7 5.7 83 104-218 40-127 (222)
36 PF04488 Gly_transf_sug: Glyco 77.8 1.3 2.8E-05 31.6 1.3 19 110-128 80-99 (103)
37 PRK15384 type III secretion sy 76.5 3.3 7.2E-05 34.3 3.5 29 105-135 215-243 (336)
38 PRK15383 type III secretion sy 76.3 3.5 7.6E-05 34.1 3.6 29 105-135 218-246 (335)
39 PRK15382 non-LEE encoded effec 75.1 4.4 9.5E-05 33.6 3.8 29 105-135 210-238 (326)
40 cd04186 GT_2_like_c Subfamily 73.6 12 0.00026 28.0 5.9 81 29-121 9-90 (166)
41 cd00761 Glyco_tranf_GTA_type G 71.7 34 0.00074 24.5 8.1 83 29-123 9-95 (156)
42 cd02525 Succinoglycan_BP_ExoA 71.7 9.5 0.00021 31.0 5.3 87 30-126 13-103 (249)
43 cd06439 CESA_like_1 CESA_like_ 70.3 13 0.00027 30.5 5.7 87 30-128 42-133 (251)
44 PF01793 Glyco_transf_15: Glyc 69.6 19 0.00041 31.5 6.7 116 11-128 52-198 (328)
45 TIGR03469 HonB hopene-associat 68.8 23 0.00049 31.6 7.4 22 106-127 134-156 (384)
46 PRK11204 N-glycosyltransferase 68.8 16 0.00034 32.8 6.5 98 15-127 55-157 (420)
47 cd02514 GT13_GLCNAC-TI GT13_GL 64.2 32 0.00069 30.3 7.1 99 27-126 10-118 (334)
48 cd06434 GT2_HAS Hyaluronan syn 63.9 38 0.00082 27.2 7.4 94 29-136 13-110 (235)
49 cd06423 CESA_like CESA_like is 63.5 26 0.00056 26.0 5.9 87 30-125 10-99 (180)
50 PF03414 Glyco_transf_6: Glyco 61.5 31 0.00067 30.2 6.4 195 15-232 100-313 (337)
51 cd06427 CESA_like_2 CESA_like_ 61.2 36 0.00077 27.8 6.8 85 30-126 14-106 (241)
52 KOG4472 Glycolipid 2-alpha-man 60.7 31 0.00067 30.7 6.3 59 7-67 74-135 (399)
53 COG5020 KTR1 Mannosyltransfera 60.7 31 0.00067 30.7 6.3 59 7-67 74-135 (399)
54 PF00535 Glycos_transf_2: Glyc 60.4 8.1 0.00018 28.8 2.6 87 30-128 11-102 (169)
55 cd02522 GT_2_like_a GT_2_like_ 58.9 37 0.00081 26.9 6.4 82 29-126 11-94 (221)
56 cd04185 GT_2_like_b Subfamily 58.8 29 0.00062 27.2 5.6 90 30-126 10-101 (202)
57 cd06433 GT_2_WfgS_like WfgS an 58.6 34 0.00073 26.4 6.0 86 29-126 10-97 (202)
58 cd06437 CESA_CaSu_A2 Cellulose 58.3 47 0.001 26.8 7.0 18 104-121 86-103 (232)
59 cd06421 CESA_CelA_like CESA_Ce 56.5 54 0.0012 26.2 7.0 88 31-127 16-107 (234)
60 PF10111 Glyco_tranf_2_2: Glyc 54.4 17 0.00038 30.8 3.8 23 105-127 88-111 (281)
61 PF03071 GNT-I: GNT-I family; 53.7 50 0.0011 30.1 6.7 104 22-128 100-214 (434)
62 cd02511 Beta4Glucosyltransfera 53.5 69 0.0015 25.9 7.2 81 30-127 13-94 (229)
63 cd02510 pp-GalNAc-T pp-GalNAc- 52.2 43 0.00092 28.5 5.9 88 30-128 12-107 (299)
64 PF04765 DUF616: Protein of un 51.2 39 0.00084 29.3 5.4 103 11-128 60-175 (305)
65 cd04195 GT2_AmsE_like GT2_AmsE 48.5 51 0.0011 25.7 5.5 18 104-121 79-96 (201)
66 TIGR03472 HpnI hopanoid biosyn 47.7 1.4E+02 0.0029 26.5 8.6 22 104-125 125-147 (373)
67 COG0463 WcaA Glycosyltransfera 47.6 88 0.0019 23.5 6.7 42 26-68 12-54 (291)
68 cd06438 EpsO_like EpsO protein 47.2 1.3E+02 0.0028 23.1 7.6 89 30-126 10-103 (183)
69 PLN02726 dolichyl-phosphate be 45.6 44 0.00095 27.3 4.9 23 105-127 93-116 (243)
70 PRK14583 hmsR N-glycosyltransf 45.4 60 0.0013 29.5 6.1 96 15-125 76-176 (444)
71 cd04192 GT_2_like_e Subfamily 44.3 40 0.00088 26.7 4.4 24 104-127 81-105 (229)
72 cd06442 DPM1_like DPM1_like re 43.8 18 0.00039 28.8 2.2 22 106-127 79-101 (224)
73 cd04179 DPM_DPG-synthase_like 43.1 15 0.00033 28.2 1.6 90 30-128 10-103 (185)
74 PRK10073 putative glycosyl tra 43.1 64 0.0014 28.1 5.7 85 30-127 19-108 (328)
75 cd06913 beta3GnTL1_like Beta 1 42.6 1.1E+02 0.0023 24.4 6.6 25 102-126 81-106 (219)
76 PRK10714 undecaprenyl phosphat 39.3 1.8E+02 0.0039 25.3 7.9 15 105-119 90-104 (325)
77 cd06420 GT2_Chondriotin_Pol_N 38.9 62 0.0014 24.6 4.6 86 30-126 10-101 (182)
78 COG2943 MdoH Membrane glycosyl 38.3 2.5E+02 0.0055 26.6 8.6 45 8-53 138-187 (736)
79 cd04196 GT_2_like_d Subfamily 37.7 83 0.0018 24.6 5.2 90 30-128 11-103 (214)
80 TIGR03111 glyc2_xrt_Gpos1 puta 37.5 78 0.0017 28.8 5.5 99 14-126 49-153 (439)
81 cd06436 GlcNAc-1-P_transferase 36.5 1.4E+02 0.0029 23.3 6.2 35 30-65 10-44 (191)
82 cd04184 GT2_RfbC_Mx_like Myxoc 36.1 83 0.0018 24.4 5.0 22 105-126 83-105 (202)
83 PF11735 CAP59_mtransfer: Cryp 35.6 2.6E+02 0.0057 23.3 8.2 25 104-129 111-136 (241)
84 PRK10063 putative glycosyl tra 33.9 1.4E+02 0.0031 24.7 6.2 81 29-122 13-99 (248)
85 PF13704 Glyco_tranf_2_4: Glyc 33.6 1.1E+02 0.0023 20.9 4.7 67 47-121 20-87 (97)
86 PRK13915 putative glucosyl-3-p 28.0 3.5E+02 0.0076 23.3 7.8 90 29-127 43-139 (306)
87 cd02526 GT2_RfbF_like RfbF is 27.2 2.5E+02 0.0053 22.3 6.5 22 105-126 75-97 (237)
88 PF03452 Anp1: Anp1; InterPro 27.2 3.9E+02 0.0085 22.8 8.1 44 11-57 22-67 (269)
89 PRK05454 glucosyltransferase M 25.9 2.5E+02 0.0055 27.4 7.1 34 104-137 219-255 (691)
90 COG1215 Glycosyltransferases, 25.3 1.8E+02 0.0039 25.9 5.8 87 31-128 69-161 (439)
91 TIGR00640 acid_CoA_mut_C methy 25.3 2.9E+02 0.0063 20.5 6.0 45 25-70 63-107 (132)
92 COG0031 CysK Cysteine synthase 23.1 1.6E+02 0.0034 25.6 4.5 32 45-76 85-116 (300)
93 COG1216 Predicted glycosyltran 22.5 2E+02 0.0044 24.5 5.3 94 26-128 12-108 (305)
94 cd02071 MM_CoA_mut_B12_BD meth 21.6 3.2E+02 0.007 19.7 5.8 46 24-70 59-104 (122)
95 PRK11498 bcsA cellulose syntha 21.4 7.8E+02 0.017 24.9 9.5 61 50-122 296-356 (852)
96 cd04187 DPM1_like_bac Bacteria 20.4 2.7E+02 0.0059 21.0 5.3 23 106-128 81-104 (181)
No 1
>PLN00176 galactinol synthase
Probab=100.00 E-value=3.7e-59 Score=399.19 Aligned_cols=248 Identities=84% Similarity=1.471 Sum_probs=226.5
Q ss_pred CCCCCeEEEEEeecCCccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCEEEEecccCCCCchhhhhhhh
Q 025063 11 MNVPKRAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAY 90 (258)
Q Consensus 11 ~~~~~~a~vt~l~~d~~y~~~~~vl~~Sl~~~~~~~~~~vl~~~~~~~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~ 90 (258)
..++++||||+|++|++|++++.+|++||+++++.++++++++++++++.++.|++.|+.+++|+++.++++..++..++
T Consensus 18 ~~~~~~AyVT~L~~n~~Y~~Ga~vL~~SLr~~~s~~~lVvlVt~dVp~e~r~~L~~~g~~V~~V~~i~~~~~~~~~~~~~ 97 (333)
T PLN00176 18 AKPAKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEEHRRILVSQGCIVREIEPVYPPENQTQFAMAY 97 (333)
T ss_pred cccCceEEEEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCcccccccccch
Confidence 33679999999999999999999999999999999999999999999999999999999999999987665554555556
Q ss_pred hhhceeeeeccccccccEEEEEecceecccCchhhcCCCCCceeeeechhcccCCCCCCcccccccccCCCCcCCCCcCC
Q 025063 91 YVINYSKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMG 170 (258)
Q Consensus 91 ~~~~~~Kl~l~~l~~ydrvlyLD~D~lv~~~l~~Lf~~~~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g 170 (258)
+..+|+||++|++.+||||||||+|++|++|||+||+++.+.+|||.||++++.|++.|++++++|+.++++.+||..+|
T Consensus 98 ~~i~~tKl~iw~l~~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~wp~~~g 177 (333)
T PLN00176 98 YVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWPAELG 177 (333)
T ss_pred hhhhhhhhhhccccccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccchhhccchhhcc
Confidence 67789999999999999999999999999999999999877899999999998899999999999998888899998777
Q ss_pred CCCCCCcceeEEEEecCHHHHHHHHHHhhcCCCCCCCChhHHHHHhccCccccCCcccccceeecccCCCccCCCceEEE
Q 025063 171 SPPPLYFNAGMFVYEPNLLTYHDLLETVKVTPPTIFAEQDFLNMYFKDIYKPIPPTYNLVVAMLWRHLENVDVDKVKVVH 250 (258)
Q Consensus 171 ~~~~~~fNsGvmli~~~~~~~~~l~~~~~~~~~~~~~DQ~~LN~~~~~~~~~L~~~yN~~~~~~~~~~~~~~~~~~~IiH 250 (258)
.++..||||||||++|+.++++++++.++..+...|+|||+||.+|.++|+.||.+||++....|++++.|+.++++|||
T Consensus 178 ~~~~~yFNSGVlvinps~~~~~~ll~~l~~~~~~~f~DQD~LN~~F~~~~~~Lp~~YN~~~~~~~~~~~~~~~~~vkIIH 257 (333)
T PLN00176 178 PPPPLYFNAGMFVFEPSLSTYEDLLETLKITPPTPFAEQDFLNMFFRDIYKPIPPVYNLVLAMLWRHPENVELDKVKVVH 257 (333)
T ss_pred CCCCCeEEeEEEEEEcCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHcCcEEECCchhcCchhhhhhChhhcccCCcEEEE
Confidence 66678999999999999999999999988766678999999999999999999999999988888888888888999999
Q ss_pred EeeccCCC
Q 025063 251 YCAAVSIS 258 (258)
Q Consensus 251 y~~~~~kp 258 (258)
|+|.+.||
T Consensus 258 Y~~~~~KP 265 (333)
T PLN00176 258 YCAAGSKP 265 (333)
T ss_pred eeCCCCCC
Confidence 99878898
No 2
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=100.00 E-value=7e-42 Score=285.53 Aligned_cols=208 Identities=42% Similarity=0.716 Sum_probs=174.5
Q ss_pred eEEEEEeecCCccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCEEEEecccCCCCchhhhhhhhhhhce
Q 025063 16 RAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINY 95 (258)
Q Consensus 16 ~a~vt~l~~d~~y~~~~~vl~~Sl~~~~~~~~~~vl~~~~~~~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~ 95 (258)
.||||++ +|++|+.++.+++.||++++++++++++++++++++.++.|++.+.+++.++.+..+.........++..+|
T Consensus 1 ~ay~t~~-~~~~Y~~~a~vl~~SL~~~~~~~~~~vl~~~~is~~~~~~L~~~~~~~~~v~~i~~~~~~~~~~~~~~~~~~ 79 (240)
T cd02537 1 EAYVTLL-TNDDYLPGALVLGYSLRKVGSSYDLVVLVTPGVSEESREALEEVGWIVREVEPIDPPDSANLLKRPRFKDTY 79 (240)
T ss_pred CEEEEEe-cChhHHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCEEEecCccCCcchhhhccchHHHHHh
Confidence 4899966 689999999999999999999999999898899999999999999888888877654221111234567789
Q ss_pred eeeeccccccccEEEEEecceecccCchhhcCCCCCceeeeechhcccCCCCCCcccccccccCCCCcCCCCcCCCCCCC
Q 025063 96 SKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMGSPPPL 175 (258)
Q Consensus 96 ~Kl~l~~l~~ydrvlyLD~D~lv~~~l~~Lf~~~~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~ 175 (258)
+||.+|++.+||||||||+|++|++||++||++ +..++|+.+.. + ..
T Consensus 80 ~kl~~~~l~~~drvlylD~D~~v~~~i~~Lf~~-~~~~~a~~d~~------------------------~--------~~ 126 (240)
T cd02537 80 TKLRLWNLTEYDKVVFLDADTLVLRNIDELFDL-PGEFAAAPDCG------------------------W--------PD 126 (240)
T ss_pred HHHHhccccccceEEEEeCCeeEccCHHHHhCC-CCceeeecccC------------------------c--------cc
Confidence 999999999999999999999999999999999 34577775521 0 26
Q ss_pred CcceeEEEEecCHHHHHHHHHHhhcCCCCCCCChhHHHHHhccC--ccccCCcccccceeecccCC-CccCCCceEEEEe
Q 025063 176 YFNAGMFVYEPNLLTYHDLLETVKVTPPTIFAEQDFLNMYFKDI--YKPIPPTYNLVVAMLWRHLE-NVDVDKVKVVHYC 252 (258)
Q Consensus 176 ~fNsGvmli~~~~~~~~~l~~~~~~~~~~~~~DQ~~LN~~~~~~--~~~L~~~yN~~~~~~~~~~~-~~~~~~~~IiHy~ 252 (258)
|||||||+++++...++++++.+.+..++.++||++||.+|+++ |..||.+||++....+..++ .+...+++||||+
T Consensus 127 ~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~DQdiLN~~~~~~~~~~~l~~~yN~~~~~~~~~~~~~~~~~~~~iiHf~ 206 (240)
T cd02537 127 LFNSGVFVLKPSEETFNDLLDALQDTPSFDGGDQGLLNSYFSDRGIWKRLPFTYNALKPLRYLHPEALWFGDEIKVVHFI 206 (240)
T ss_pred cccceEEEEcCCHHHHHHHHHHHhccCCCCCCCHHHHHHHHcCCCCEeECCcceeeehhhhccCchhhcccCCcEEEEEe
Confidence 89999999999999999999998876557789999999999999 99999999998775543333 4556799999999
Q ss_pred eccCCC
Q 025063 253 AAVSIS 258 (258)
Q Consensus 253 ~~~~kp 258 (258)
| +.||
T Consensus 207 g-~~KP 211 (240)
T cd02537 207 G-GDKP 211 (240)
T ss_pred C-CCCC
Confidence 9 5787
No 3
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=4.1e-38 Score=264.09 Aligned_cols=222 Identities=25% Similarity=0.408 Sum_probs=157.6
Q ss_pred EEEEEeecCCccHHHHHHHHHHHHhcCCC-CCEEEEECCCCCHHHHHHHHhC----CCEEEEecccCCCCchh-hh-hhh
Q 025063 17 AYVTFLAGNGDYVKGVVGLAKGLRKAKSE-YPLVVAILPDVPEDHRQILESQ----GCIVREIEPVYPPENQT-EF-AMA 89 (258)
Q Consensus 17 a~vt~l~~d~~y~~~~~vl~~Sl~~~~~~-~~~~vl~~~~~~~~~~~~L~~~----~~~i~~v~~~~~~~~~~-~~-~~~ 89 (258)
++|+ +++|++|+.++.|+++||++++++ +.++| ++++++++.++.|++. +..+ ++.+++.+.... .. ...
T Consensus 2 ~i~~-~a~d~~y~~~~~v~i~Sl~~~~~~~~~~~i-l~~~is~~~~~~L~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~ 78 (246)
T cd00505 2 AIVI-VATGDEYLRGAIVLMKSVLRHRTKPLRFHV-LTNPLSDTFKAALDNLRKLYNFNY-ELIPVDILDSVDSEHLKRP 78 (246)
T ss_pred eEEE-EecCcchhHHHHHHHHHHHHhCCCCeEEEE-EEccccHHHHHHHHHHHhccCceE-EEEeccccCcchhhhhcCc
Confidence 5676 567889999999999999998875 34444 5678999999888764 2222 222222222111 11 134
Q ss_pred hhhhceeeeecccccc-ccEEEEEecceecccCchhhcCCC--CCceeeeechhcccCCCCCCcccccccccCCCCcCCC
Q 025063 90 YYVINYSKLRIWEFVE-YEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWP 166 (258)
Q Consensus 90 ~~~~~~~Kl~l~~l~~-ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p 166 (258)
++..+|+||++|++++ ++||||||+|++|++||++||+++ +..+|||+|+..... .. .+ ....++
T Consensus 79 ~~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~-~~--~~--------~~~~~~- 146 (246)
T cd00505 79 IKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRRE-GK--YY--------RQKRSH- 146 (246)
T ss_pred cccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhc-cc--hh--------hcccCC-
Confidence 4678999999999876 999999999999999999999996 346888988642110 00 00 000111
Q ss_pred CcCCCCCCCCcceeEEEEecCHHHHHHHHHHhh-----cCCCCCCCChhHHHHHhccC---ccccCCcccccceeecccC
Q 025063 167 VEMGSPPPLYFNAGMFVYEPNLLTYHDLLETVK-----VTPPTIFAEQDFLNMYFKDI---YKPIPPTYNLVVAMLWRHL 238 (258)
Q Consensus 167 ~~~g~~~~~~fNsGvmli~~~~~~~~~l~~~~~-----~~~~~~~~DQ~~LN~~~~~~---~~~L~~~yN~~~~~~~~~~ 238 (258)
.....||||||||+|+++|+++++++.+. ....+.++|||+||.+|.++ +..||.+||++....+...
T Consensus 147 ----~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~~~~~~~~ 222 (246)
T cd00505 147 ----LAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYRSL 222 (246)
T ss_pred ----CCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcCCCeEEECCCeeeEEecCccccc
Confidence 12357999999999999998877765432 22347789999999999998 9999999999876543322
Q ss_pred CCc--cCCCceEEEEeeccCCC
Q 025063 239 ENV--DVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 239 ~~~--~~~~~~IiHy~~~~~kp 258 (258)
... ..++++||||+| +.||
T Consensus 223 ~~~~~~~~~~~iiHy~g-~~KP 243 (246)
T cd00505 223 NCFKAFVKNAKVIHFNG-PTKP 243 (246)
T ss_pred cchhhhcCCCEEEEeCC-CCCC
Confidence 221 367999999999 5888
No 4
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=100.00 E-value=4.3e-37 Score=257.82 Aligned_cols=202 Identities=24% Similarity=0.353 Sum_probs=157.7
Q ss_pred eEEEEEeecCCccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHH-------HHhCCCEEEEecccCCCCchhhhhh
Q 025063 16 RAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQI-------LESQGCIVREIEPVYPPENQTEFAM 88 (258)
Q Consensus 16 ~a~vt~l~~d~~y~~~~~vl~~Sl~~~~~~~~~~vl~~~~~~~~~~~~-------L~~~~~~i~~v~~~~~~~~~~~~~~ 88 (258)
+||||++ ++++|++++.++++||++.++++++++|++++++...... +...++.+..++.+..+. ..
T Consensus 1 fAYvtl~-Tn~~YL~gAlvL~~sLr~~gs~~dlVvLvt~~~~~~~~~~~~~~~~~l~~~~~~v~~v~~~~~~~-----~~ 74 (278)
T cd06914 1 YAYVNYA-TNADYLCNALILFEQLRRLGSKAKLVLLVPETLLDRNLDDFVRRDLLLARDKVIVKLIPVIIASG-----GD 74 (278)
T ss_pred CeEEEEe-cChhHHHHHHHHHHHHHHhCCCCCEEEEECCCCChhhhhhHHHHHHHhhccCcEEEEcCcccCCC-----CC
Confidence 5999966 6999999999999999999999999999999987654322 233455555554433322 12
Q ss_pred hhhhhceeeeeccccccccEEEEEecceecccCchhhcCCC-CCceeeeechhcccCCCCCCcccccccccCCCCcCCCC
Q 025063 89 AYYVINYSKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFDAP-DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPV 167 (258)
Q Consensus 89 ~~~~~~~~Kl~l~~l~~ydrvlyLD~D~lv~~~l~~Lf~~~-~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 167 (258)
..+..+|+||.+|++.+||||||||+|++|+++||+||+++ ...+||+. .
T Consensus 75 ~~~~~~~tKl~~~~l~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~-------------------------~---- 125 (278)
T cd06914 75 AYWAKSLTKLRAFNQTEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPR-------------------------A---- 125 (278)
T ss_pred ccHHHHHHHHHhccccceeeEEEecCChhhhcChHHHhcCCcccceeeec-------------------------C----
Confidence 23455799999999999999999999999999999999997 33344431 0
Q ss_pred cCCCCCCCCcceeEEEEecCHHHHHHHHHHhhcCC--CCCCCChhHHHHHhccC-------ccccCCc-ccccceeecc-
Q 025063 168 EMGSPPPLYFNAGMFVYEPNLLTYHDLLETVKVTP--PTIFAEQDFLNMYFKDI-------YKPIPPT-YNLVVAMLWR- 236 (258)
Q Consensus 168 ~~g~~~~~~fNsGvmli~~~~~~~~~l~~~~~~~~--~~~~~DQ~~LN~~~~~~-------~~~L~~~-yN~~~~~~~~- 236 (258)
..|||||||||+|+.+.++++++.+.... +..++|||+||.+|.++ +..||.+ ||+..+.+.+
T Consensus 126 ------~~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~~~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~~ 199 (278)
T cd06914 126 ------YWKFASHLMVIKPSKEAFKELMTEILPAYLNKKNEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLLTGEFREK 199 (278)
T ss_pred ------cceecceeEEEeCCHHHHHHHHHHHHHhcccCCCCCChHHHHHHHhCCccccCcceEEcCccccccCChhhccc
Confidence 13899999999999999999999876532 23679999999999999 9999997 9999874321
Q ss_pred -------c----CCCcc----CCCceEEEEeeccC-CC
Q 025063 237 -------H----LENVD----VDKVKVVHYCAAVS-IS 258 (258)
Q Consensus 237 -------~----~~~~~----~~~~~IiHy~~~~~-kp 258 (258)
. .+.|+ ..+.|+|||++.+- ||
T Consensus 200 ~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KP 237 (278)
T cd06914 200 LHKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKP 237 (278)
T ss_pred CHHHhhccccccccccCHHHHHhhCeEEEecCCCCCCC
Confidence 1 23453 47999999999865 77
No 5
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=2.9e-36 Score=253.26 Aligned_cols=217 Identities=23% Similarity=0.346 Sum_probs=155.8
Q ss_pred eecCCccHHHHHHHHHHHHhcCCC--CCEEEEECCCCCHHHHHHHHhC----CCEEEEecccCCCCchhh--hhhhhhhh
Q 025063 22 LAGNGDYVKGVVGLAKGLRKAKSE--YPLVVAILPDVPEDHRQILESQ----GCIVREIEPVYPPENQTE--FAMAYYVI 93 (258)
Q Consensus 22 l~~d~~y~~~~~vl~~Sl~~~~~~--~~~~vl~~~~~~~~~~~~L~~~----~~~i~~v~~~~~~~~~~~--~~~~~~~~ 93 (258)
+|+|++|+.++++++.||+++++. +++++ ++++++++.++.|++. +..+. +.+++.+..... ....++..
T Consensus 5 ~~~d~~y~~~~~~~l~Sl~~~~~~~~~~~~i-l~~~is~~~~~~L~~~~~~~~~~i~-~~~i~~~~~~~~~~~~~~~~~~ 82 (248)
T cd04194 5 FAIDDNYAPYLAVTIKSILANNSKRDYDFYI-LNDDISEENKKKLKELLKKYNSSIE-FIKIDNDDFKFFPATTDHISYA 82 (248)
T ss_pred EEecHhhHHHHHHHHHHHHhcCCCCceEEEE-EeCCCCHHHHHHHHHHHHhcCCeEE-EEEcCHHHHhcCCcccccccHH
Confidence 568999999999999999999884 45555 4578999999988875 33332 222322111000 11234567
Q ss_pred ceeeeecccccc-ccEEEEEecceecccCchhhcCCC--CCceeeeechhcccCCCCCCcccccccccCCCCcCCCCcCC
Q 025063 94 NYSKLRIWEFVE-YEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMG 170 (258)
Q Consensus 94 ~~~Kl~l~~l~~-ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g 170 (258)
+|+||+++++.+ ++||||||+|++|++|+++||+++ +..+||++|+.......+ . ....+
T Consensus 83 ~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~---------------~--~~~~~ 145 (248)
T cd04194 83 TYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKR---------------K--RRLGG 145 (248)
T ss_pred HHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHH---------------H--hhcCC
Confidence 899999999875 999999999999999999999985 446888988643210000 0 00011
Q ss_pred CCCCCCcceeEEEEecCHHHHH----HHHHHhhcCC-CCCCCChhHHHHHhccCccccCCcccccceeecccCC------
Q 025063 171 SPPPLYFNAGMFVYEPNLLTYH----DLLETVKVTP-PTIFAEQDFLNMYFKDIYKPIPPTYNLVVAMLWRHLE------ 239 (258)
Q Consensus 171 ~~~~~~fNsGvmli~~~~~~~~----~l~~~~~~~~-~~~~~DQ~~LN~~~~~~~~~L~~~yN~~~~~~~~~~~------ 239 (258)
.....|||||||++|+++|+.+ ++++++.+.. .+.++||++||.+|.++|..||.+||++.........
T Consensus 146 ~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~~~L~~~~N~~~~~~~~~~~~~~~~~ 225 (248)
T cd04194 146 YDDGSYFNSGVLLINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKKSKEEQ 225 (248)
T ss_pred CcccceeeecchheeHHHHHHhhhHHHHHHHHHhCCCceeeCChHHHHHHHhCCeEEcCcccccchhHhHHhhccchhHH
Confidence 1245899999999999998754 5556666543 3678999999999999999999999999876533211
Q ss_pred --CccCCCceEEEEeeccCCC
Q 025063 240 --NVDVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 240 --~~~~~~~~IiHy~~~~~kp 258 (258)
.+..++++||||+| +.||
T Consensus 226 ~~~~~~~~~~iiHf~g-~~KP 245 (248)
T cd04194 226 ELEEARKNPVIIHYTG-SDKP 245 (248)
T ss_pred HHHHHhcCCEEEEeCC-CCCC
Confidence 12368999999999 5887
No 6
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=8.5e-36 Score=259.00 Aligned_cols=224 Identities=17% Similarity=0.232 Sum_probs=153.9
Q ss_pred CCeEEEEEeecCCccHHHHHHHHHHHHhcCCCC--CEEEEECCCCCHHHHHHHHhC----CCEEEEecccCCCCchhhhh
Q 025063 14 PKRAYVTFLAGNGDYVKGVVGLAKGLRKAKSEY--PLVVAILPDVPEDHRQILESQ----GCIVREIEPVYPPENQTEFA 87 (258)
Q Consensus 14 ~~~a~vt~l~~d~~y~~~~~vl~~Sl~~~~~~~--~~~vl~~~~~~~~~~~~L~~~----~~~i~~v~~~~~~~~~~~~~ 87 (258)
....+| +++|++|+.+++|++.||+.++++. .++| +++++++++++.|++. +..+. +..++.. ..+.+.
T Consensus 24 ~~i~Iv--~~~D~ny~~~~~vsi~Sil~nn~~~~~~f~I-l~~~is~e~~~~l~~l~~~~~~~i~-~~~id~~-~~~~~~ 98 (334)
T PRK15171 24 NSLDIA--YGIDKNFLFGCGVSIASVLLNNPDKSLVFHV-FTDYISDADKQRFSALAKQYNTRIN-IYLINCE-RLKSLP 98 (334)
T ss_pred CceeEE--EECcHhhHHHHHHHHHHHHHhCCCCCEEEEE-EeCCCCHHHHHHHHHHHHhcCCeEE-EEEeCHH-HHhCCc
Confidence 456666 7889999999999999999988764 4555 5689999998877653 44332 1122211 111111
Q ss_pred --hhhhhhceeeeeccccc--cccEEEEEecceecccCchhhcCCC--CCceeeeechhcccCCCCCCcccccccccCCC
Q 025063 88 --MAYYVINYSKLRIWEFV--EYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPE 161 (258)
Q Consensus 88 --~~~~~~~~~Kl~l~~l~--~ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~ 161 (258)
..++.++|+||++++++ ++|||||||+|++|.+||++||+++ ++.+|||.+... ..| +... ..
T Consensus 99 ~~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~-~~~------~~~~----~~ 167 (334)
T PRK15171 99 STKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGD-AEW------WSKR----AQ 167 (334)
T ss_pred ccCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccc-hhH------HHHH----HH
Confidence 23456789999999975 5999999999999999999999996 356887743210 000 0000 00
Q ss_pred CcCCCCcCCCCCCCCcceeEEEEecCHHHHHHH----HHHhhcC---CCCCCCChhHHHHHhccCccccCCcccccceee
Q 025063 162 KVQWPVEMGSPPPLYFNAGMFVYEPNLLTYHDL----LETVKVT---PPTIFAEQDFLNMYFKDIYKPIPPTYNLVVAML 234 (258)
Q Consensus 162 ~~~~p~~~g~~~~~~fNsGvmli~~~~~~~~~l----~~~~~~~---~~~~~~DQ~~LN~~~~~~~~~L~~~yN~~~~~~ 234 (258)
..+.| + ....||||||||||+++|+.+.+ ++.+.+. ..+.++|||+||.+|.|+|..||.+||++....
T Consensus 168 ~l~~~---~-~~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~ 243 (334)
T PRK15171 168 SLQTP---G-LASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFIDAKYNTQFSLN 243 (334)
T ss_pred hcCCc---c-ccccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECCHhhCCccchh
Confidence 11222 1 12369999999999999976554 4555432 246789999999999999999999999986543
Q ss_pred cccCCC---ccCCCceEEEEeeccCCC
Q 025063 235 WRHLEN---VDVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 235 ~~~~~~---~~~~~~~IiHy~~~~~kp 258 (258)
+...+. ...++|+||||+| +.||
T Consensus 244 ~~~~~~~~~~~~~~p~IIHy~G-~~KP 269 (334)
T PRK15171 244 YELKDSVINPVNDETVFIHYIG-PTKP 269 (334)
T ss_pred HHHHhcccccccCCCEEEEECC-CCCC
Confidence 221111 1246899999999 7887
No 7
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=3.3e-35 Score=251.01 Aligned_cols=222 Identities=20% Similarity=0.292 Sum_probs=159.5
Q ss_pred eEEEEEeecCCccHHHHHHHHHHHHhcCC--CCCEEEEECCCCCHHHHHHHHhC----CCEEEEecccCCCCchh-h-hh
Q 025063 16 RAYVTFLAGNGDYVKGVVGLAKGLRKAKS--EYPLVVAILPDVPEDHRQILESQ----GCIVREIEPVYPPENQT-E-FA 87 (258)
Q Consensus 16 ~a~vt~l~~d~~y~~~~~vl~~Sl~~~~~--~~~~~vl~~~~~~~~~~~~L~~~----~~~i~~v~~~~~~~~~~-~-~~ 87 (258)
..+| +++|.+|+.+++|++.|++.|+. .+.++++ .+++++|+.++|++. +..+. +..++...... . ..
T Consensus 3 ~~Iv--~a~D~nY~~~~gvsI~SiL~~n~~~~~~fhil-~~~i~~e~~~~l~~~~~~f~~~i~-~~~id~~~~~~~~~~~ 78 (325)
T COG1442 3 IPIA--FAFDKNYLIPAGVSIYSLLEHNRKIFYKFHIL-VDGLNEEDKKKLNETAEPFKSFIV-LEVIDIEPFLDYPPFT 78 (325)
T ss_pred ccEE--EEcccccchhHHHHHHHHHHhCccccEEEEEE-ecCCCHHHHHHHHHHHHhhcccee-eEEEechhhhcccccc
Confidence 3455 67899999999999999999998 6778775 579999998888753 33222 12222211100 0 12
Q ss_pred hhhhhhceeeeecccc-ccccEEEEEecceecccCchhhcCCC--CCceeeeechhcccCCCCCCcccccccccCCCCcC
Q 025063 88 MAYYVINYSKLRIWEF-VEYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQ 164 (258)
Q Consensus 88 ~~~~~~~~~Kl~l~~l-~~ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (258)
.+++..+|.|++++++ .++||+||+|+|++|.+++++||+++ +.++|||.|....- + .+.. .+
T Consensus 79 ~~~s~~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~-~-------~~~~----~~-- 144 (325)
T COG1442 79 KRFSKMVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHY-M-------KEGA----LR-- 144 (325)
T ss_pred cchHHHHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhh-h-------hhhh----hH--
Confidence 3455689999999998 47899999999999999999999995 45689999865310 0 0000 00
Q ss_pred CCCcCCCCCCCCcceeEEEEecCHHHHHHH----HHHhhcC-CCCCCCChhHHHHHhccCccccCCcccccceeecccCC
Q 025063 165 WPVEMGSPPPLYFNAGMFVYEPNLLTYHDL----LETVKVT-PPTIFAEQDFLNMYFKDIYKPIPPTYNLVVAMLWRHLE 239 (258)
Q Consensus 165 ~p~~~g~~~~~~fNsGvmli~~~~~~~~~l----~~~~~~~-~~~~~~DQ~~LN~~~~~~~~~L~~~yN~~~~~~~~~~~ 239 (258)
...+.....|||||||++|+..|+.+.+ ++.+.+. +.+.++|||+||.+|+++|..||.+||++.........
T Consensus 145 --~~~~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~~~~~~~DQdiLN~i~~~~~~~L~~~YN~~~~~~~~~~~ 222 (325)
T COG1442 145 --LEKGDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKENDLLYPDQDILNMIFEDRVLELPIRYNAIPYIDSQLKD 222 (325)
T ss_pred --hhhcccccccCccceeeehHHHHHHhhhHHHHHHHHhccccccCCccccHHHHHHHhhhhccCcccceeehhhhccch
Confidence 0112224689999999999999976555 4554433 35789999999999999999999999999765422222
Q ss_pred ---CccCCCceEEEEeeccCCC
Q 025063 240 ---NVDVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 240 ---~~~~~~~~IiHy~~~~~kp 258 (258)
.....++.|+||+| +.||
T Consensus 223 ~~~~~~~~~~~iiHy~g-~~KP 243 (325)
T COG1442 223 KYIYPFGDDPVILHYAG-PTKP 243 (325)
T ss_pred hhhccCCCCceEEEecC-CCCC
Confidence 22378999999999 7777
No 8
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=3.8e-34 Score=242.62 Aligned_cols=219 Identities=22% Similarity=0.268 Sum_probs=143.4
Q ss_pred eEEEEEeecCCccHHHHHHHHHHHHhcCCC-CCEEEEECCCCCHHHHHHHHhC----CCEEEEecccCCCCchhhh---h
Q 025063 16 RAYVTFLAGNGDYVKGVVGLAKGLRKAKSE-YPLVVAILPDVPEDHRQILESQ----GCIVREIEPVYPPENQTEF---A 87 (258)
Q Consensus 16 ~a~vt~l~~d~~y~~~~~vl~~Sl~~~~~~-~~~~vl~~~~~~~~~~~~L~~~----~~~i~~v~~~~~~~~~~~~---~ 87 (258)
.|+| +++ .+|++++.|++.||+.++.. +.+++ ++++++++..+.|.+. ++++... ...+..+.+ +
T Consensus 3 ~~iv--~~~-~~y~~~~~~~i~Sil~n~~~~~~fhi-i~d~~s~~~~~~l~~~~~~~~~~i~f~---~i~~~~~~~~~~~ 75 (280)
T cd06431 3 VAIV--CAG-YNASRDVVTLVKSVLFYRRNPLHFHL-ITDEIARRILATLFQTWMVPAVEVSFY---NAEELKSRVSWIP 75 (280)
T ss_pred EEEE--Ecc-CCcHHHHHHHHHHHHHcCCCCEEEEE-EECCcCHHHHHHHHHhccccCcEEEEE---EhHHhhhhhccCc
Confidence 5666 566 99999999999999998643 44555 5688999998888643 3343222 111100111 1
Q ss_pred -hhhhhh-ceeeeeccccc--cccEEEEEecceecccCchhhcCC--C--CCce-eeeechhcccCCCCCCccccccccc
Q 025063 88 -MAYYVI-NYSKLRIWEFV--EYEKMIYLDGDIQVFDNIDHLFDA--P--DGYF-YAVMDCFCEKTWSNSPQFTIGYCQQ 158 (258)
Q Consensus 88 -~~~~~~-~~~Kl~l~~l~--~ydrvlyLD~D~lv~~~l~~Lf~~--~--~~~i-aa~~d~~~~~~~~~~~~~~~~~~~~ 158 (258)
..++.. +|.||++++++ ++|||||||+|++|++||++||++ + +..+ |++.+.. . + + .....
T Consensus 76 ~~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~-~--~-----~-~~~~~- 145 (280)
T cd06431 76 NKHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQS-D--W-----Y-LGNLW- 145 (280)
T ss_pred ccchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccch-h--h-----h-hhhhh-
Confidence 112222 56899999975 399999999999999999999987 2 3334 4444321 0 0 0 00000
Q ss_pred CCCCcCCCCcCCCCCCCCcceeEEEEecCHHHHHHHHHHh----hc----CCCCCCCChhHHHHHhccC---ccccCCcc
Q 025063 159 CPEKVQWPVEMGSPPPLYFNAGMFVYEPNLLTYHDLLETV----KV----TPPTIFAEQDFLNMYFKDI---YKPIPPTY 227 (258)
Q Consensus 159 ~~~~~~~p~~~g~~~~~~fNsGvmli~~~~~~~~~l~~~~----~~----~~~~~~~DQ~~LN~~~~~~---~~~L~~~y 227 (258)
.....|+ .. ..||||||||||+++|+.+++.+.+ ++ ..++.++|||+||.+|.++ ++.||.+|
T Consensus 146 -~~~~~~~-~~----~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~w 219 (280)
T cd06431 146 -KNHRPWP-AL----GRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAW 219 (280)
T ss_pred -hccCCCc-cc----ccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcceeEECCCcc
Confidence 0001111 11 2599999999999999876554432 22 2346789999999999999 78999999
Q ss_pred cccceeecccCCCc-cCCCceEEEEeeccCCC
Q 025063 228 NLVVAMLWRHLENV-DVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 228 N~~~~~~~~~~~~~-~~~~~~IiHy~~~~~kp 258 (258)
|++........+.+ +..+|+||||+| +.||
T Consensus 220 N~~~~~~~~~~~~~~~~~~p~IIHf~g-~~KP 250 (280)
T cd06431 220 NVQLSDHTRSEQCYRDVSDLKVIHWNS-PKKL 250 (280)
T ss_pred ccccCccchHhHhhcCcCCCEEEEeCC-CCCC
Confidence 99875432221222 257899999999 6787
No 9
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=100.00 E-value=9e-35 Score=243.48 Aligned_cols=221 Identities=25% Similarity=0.416 Sum_probs=145.9
Q ss_pred eecCCccHHHHHHHHHHHHhcCCC-CCE-EEEECCCCCHHHHHHHHhCCCEEEEecccCCCCch--------hhhhhhhh
Q 025063 22 LAGNGDYVKGVVGLAKGLRKAKSE-YPL-VVAILPDVPEDHRQILESQGCIVREIEPVYPPENQ--------TEFAMAYY 91 (258)
Q Consensus 22 l~~d~~y~~~~~vl~~Sl~~~~~~-~~~-~vl~~~~~~~~~~~~L~~~~~~i~~v~~~~~~~~~--------~~~~~~~~ 91 (258)
+++|++|+.+++|+++||++++++ ..+ +++++++++++.++.|++.+..+..+..+...... ......+.
T Consensus 4 ~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (250)
T PF01501_consen 4 LACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKRHFS 83 (250)
T ss_dssp EECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCTCGG
T ss_pred EEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhccccccccc
Confidence 567999999999999999999885 444 34467899999999998766543222221111110 01112345
Q ss_pred hhceeeeecccc-ccccEEEEEecceecccCchhhcCCC--CCceeeeechhccc-CCCCCCcccccccccCCCCcCCCC
Q 025063 92 VINYSKLRIWEF-VEYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEK-TWSNSPQFTIGYCQQCPEKVQWPV 167 (258)
Q Consensus 92 ~~~~~Kl~l~~l-~~ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~ 167 (258)
..+|.|++++++ .+||||||||+|++|++|+++||+++ +..+||+.+..... .+...+ ...
T Consensus 84 ~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~---------------~~~ 148 (250)
T PF01501_consen 84 PATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFP---------------FSE 148 (250)
T ss_dssp GGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTS---------------SEE
T ss_pred HHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccc---------------hhh
Confidence 678999999998 79999999999999999999999974 34578887711100 000000 000
Q ss_pred cCCCCCCCCcceeEEEEecCHHHHHHHHHHh----hcCC-CCCCCChhHHHHHhccCccccCCcccccceee-cccCCC-
Q 025063 168 EMGSPPPLYFNAGMFVYEPNLLTYHDLLETV----KVTP-PTIFAEQDFLNMYFKDIYKPIPPTYNLVVAML-WRHLEN- 240 (258)
Q Consensus 168 ~~g~~~~~~fNsGvmli~~~~~~~~~l~~~~----~~~~-~~~~~DQ~~LN~~~~~~~~~L~~~yN~~~~~~-~~~~~~- 240 (258)
..+.....+||||||+++++.++++.+.+.+ +... ...++||++||.+|.+++..||.+||++.... +.....
T Consensus 149 ~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~~~~~L~~~~N~~~~~~~~~~~~~~ 228 (250)
T PF01501_consen 149 RKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFYGNIKPLPCRYNCQPSWYNQSDDYFN 228 (250)
T ss_dssp ECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTTGEEEEEGGGSEEHHHHHHTHHHHH
T ss_pred cccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhccceeEEECchhccccccccccchhhH
Confidence 1112236999999999999999877665543 3332 46789999999999999999999999987754 111111
Q ss_pred ccCCCceEEEEeeccCCC
Q 025063 241 VDVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 241 ~~~~~~~IiHy~~~~~kp 258 (258)
...++++||||+| +.||
T Consensus 229 ~~~~~~~iiHy~g-~~KP 245 (250)
T PF01501_consen 229 PILEDAKIIHYSG-PPKP 245 (250)
T ss_dssp HHGCC-SEEE--S-SS-T
T ss_pred hhcCCeEEEEeCC-CCcC
Confidence 1368999999999 8898
No 10
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.97 E-value=1.8e-31 Score=223.20 Aligned_cols=196 Identities=13% Similarity=0.149 Sum_probs=132.2
Q ss_pred eecCCccHHHHHHHHHHHHhcCCC-CCEE-EEECCCCCHHHHHHHHhC----CCE--EEEecccCCCCchh---------
Q 025063 22 LAGNGDYVKGVVGLAKGLRKAKSE-YPLV-VAILPDVPEDHRQILESQ----GCI--VREIEPVYPPENQT--------- 84 (258)
Q Consensus 22 l~~d~~y~~~~~vl~~Sl~~~~~~-~~~~-vl~~~~~~~~~~~~L~~~----~~~--i~~v~~~~~~~~~~--------- 84 (258)
+++| +|+. +++++.|+..++++ .+++ .+++++++.+..+.+... +.+ ++.++.........
T Consensus 5 ~~~D-n~l~-~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~ 82 (257)
T cd06429 5 IFSD-NRLA-AAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLMQLES 82 (257)
T ss_pred EEec-chhH-HHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhhhhhc
Confidence 3467 9995 55556666665544 4543 346789998877776543 333 33332211000000
Q ss_pred -------hhh--hhhhhhceeeeeccccc-cccEEEEEecceecccCchhhcCCC--CCceeeeechhcccCCCCCCccc
Q 025063 85 -------EFA--MAYYVINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFT 152 (258)
Q Consensus 85 -------~~~--~~~~~~~~~Kl~l~~l~-~ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~~~~~~~~~~ 152 (258)
+.+ ..++..+|.||++|++. +++||||||+|++|++||++||+++ +..+||++
T Consensus 83 ~~~~~~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~--------------- 147 (257)
T cd06429 83 EADTSNLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVE--------------- 147 (257)
T ss_pred cccccccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEh---------------
Confidence 001 12346789999999975 6899999999999999999999996 33345542
Q ss_pred ccccccCCCCcCCCCcCCCCCCCCcceeEEEEecCHHHHHHH----HHHhhcCC-C----CCCCChhHHHHHhccCcccc
Q 025063 153 IGYCQQCPEKVQWPVEMGSPPPLYFNAGMFVYEPNLLTYHDL----LETVKVTP-P----TIFAEQDFLNMYFKDIYKPI 223 (258)
Q Consensus 153 ~~~~~~~~~~~~~p~~~g~~~~~~fNsGvmli~~~~~~~~~l----~~~~~~~~-~----~~~~DQ~~LN~~~~~~~~~L 223 (258)
.|||||||++|+++|+.+++ +++++... . ...+||++||.+|.+++..|
T Consensus 148 ----------------------dyfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~L 205 (257)
T cd06429 148 ----------------------TSWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGLTSPL 205 (257)
T ss_pred ----------------------hhcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCeeEEC
Confidence 27999999999999986554 44444332 1 34689999999999999999
Q ss_pred CCcccccceeecccC-CCccCCCceEEEEeeccCCC
Q 025063 224 PPTYNLVVAMLWRHL-ENVDVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 224 ~~~yN~~~~~~~~~~-~~~~~~~~~IiHy~~~~~kp 258 (258)
|.+||++. ..+... .....++++||||+| +.||
T Consensus 206 ~~~wN~~~-l~~~~~~~~~~~~~~~IIHy~G-~~KP 239 (257)
T cd06429 206 DPSWHVRG-LGYNYGIRPQDIKAAAVLHFNG-NMKP 239 (257)
T ss_pred ChHHcccC-CcccccccccccCCcEEEEECC-CCCC
Confidence 99999973 222111 112256999999999 7888
No 11
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.97 E-value=7e-31 Score=221.98 Aligned_cols=213 Identities=12% Similarity=0.153 Sum_probs=142.5
Q ss_pred eecCCccHHHHHHHHHHHHhcCC-CCCEEEEECCCCCHHHHHHHHhC---CCEEE--EecccCCCCc-hhhhhhhhhhhc
Q 025063 22 LAGNGDYVKGVVGLAKGLRKAKS-EYPLVVAILPDVPEDHRQILESQ---GCIVR--EIEPVYPPEN-QTEFAMAYYVIN 94 (258)
Q Consensus 22 l~~d~~y~~~~~vl~~Sl~~~~~-~~~~~vl~~~~~~~~~~~~L~~~---~~~i~--~v~~~~~~~~-~~~~~~~~~~~~ 94 (258)
++++++ +..+.++++|+..++. ...++++..+.++++..++|+++ +.+.+ .+.++..|.. ...++.-....+
T Consensus 6 v~~g~~-~~~~~~~lkSil~~n~~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~~~ws~l~~~~~ 84 (304)
T cd06430 6 VACGER-LEETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEWKKLFKPCA 84 (304)
T ss_pred EEcCCc-HHHHHHHHHHHHHhCCCCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccchhhhhhcccHHH
Confidence 345555 8999999999987764 34566655444888877777765 22222 4555554432 123332122368
Q ss_pred eeeeeccccc-cccEEEEEecceecccCchhhcCC--C--CCceeee-echhcccCCCCCCcccccccccCCCCcCCCC-
Q 025063 95 YSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDA--P--DGYFYAV-MDCFCEKTWSNSPQFTIGYCQQCPEKVQWPV- 167 (258)
Q Consensus 95 ~~Kl~l~~l~-~ydrvlyLD~D~lv~~~l~~Lf~~--~--~~~iaa~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~- 167 (258)
|.||++++++ ++|||||||+|++|++||+|||++ + +..+||+ ++... + ..+|..
T Consensus 85 y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~-~------------------~~~~~~~ 145 (304)
T cd06430 85 AQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEE-P------------------NIGWYNR 145 (304)
T ss_pred HHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccc-c------------------chhhhhh
Confidence 9999999975 689999999999999999999987 4 3346654 43210 0 011111
Q ss_pred --cCCCCCCCCcceeEEEEecCHHHH-----------H----HHHHHhhcCC-CCCCCChhHHHHHhccC---ccccCCc
Q 025063 168 --EMGSPPPLYFNAGMFVYEPNLLTY-----------H----DLLETVKVTP-PTIFAEQDFLNMYFKDI---YKPIPPT 226 (258)
Q Consensus 168 --~~g~~~~~~fNsGvmli~~~~~~~-----------~----~l~~~~~~~~-~~~~~DQ~~LN~~~~~~---~~~L~~~ 226 (258)
........+||||||+||+++|+. . ++++.++++. ++.++|||+||.+|.++ ++.||++
T Consensus 146 ~~~~~~~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN~v~~~~p~~~~~Lp~~ 225 (304)
T cd06430 146 FARHPYYGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHHNPEMLYVFPCH 225 (304)
T ss_pred hcccCcccccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHHHHHcCCCCeEEEcCcc
Confidence 011112357999999999999886 2 3455565543 47799999999999997 8999999
Q ss_pred ccccceeec-c-cCCCccCCCceEEEEeec
Q 025063 227 YNLVVAMLW-R-HLENVDVDKVKVVHYCAA 254 (258)
Q Consensus 227 yN~~~~~~~-~-~~~~~~~~~~~IiHy~~~ 254 (258)
||++..... . .++.-+.+.++|||+.+.
T Consensus 226 wN~~~d~~~y~~~~~~~~~~~~~~~H~n~~ 255 (304)
T cd06430 226 WNYRPDHCMYGSNCKAAEEEGVFILHGNRG 255 (304)
T ss_pred ccCCccceeecccccccccccceEEEcCCC
Confidence 998875432 1 122223579999999974
No 12
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.97 E-value=5.3e-30 Score=214.10 Aligned_cols=217 Identities=14% Similarity=0.139 Sum_probs=143.3
Q ss_pred ecCCccHHHHHHHHHHHHhcCC-CCCEEEEECCCCCHHHHHHHHhC----CCEEEEecccCCCCchhhhhh-hhhhhcee
Q 025063 23 AGNGDYVKGVVGLAKGLRKAKS-EYPLVVAILPDVPEDHRQILESQ----GCIVREIEPVYPPENQTEFAM-AYYVINYS 96 (258)
Q Consensus 23 ~~d~~y~~~~~vl~~Sl~~~~~-~~~~~vl~~~~~~~~~~~~L~~~----~~~i~~v~~~~~~~~~~~~~~-~~~~~~~~ 96 (258)
++++.|+.+++|++.||++++. .+.++++ +++++++.++.|++. +..+..+ .++.+........ .+...+|.
T Consensus 7 ~~~~~y~~~~~v~l~Sll~nn~~~~~fyil-~~~is~e~~~~l~~~~~~~~~~i~~i-~i~~~~~~~~~~~~~~~~~~y~ 84 (248)
T cd06432 7 ASGHLYERFLRIMMLSVMKNTKSPVKFWFI-KNFLSPQFKEFLPEMAKEYGFEYELV-TYKWPRWLHKQTEKQRIIWGYK 84 (248)
T ss_pred cCcHHHHHHHHHHHHHHHHcCCCCEEEEEE-eCCCCHHHHHHHHHHHHHhCCceEEE-EecChhhhhcccccchhHHHHH
Confidence 6789999999999999999864 4556664 578999998877653 4433222 1221111011111 11123577
Q ss_pred eeeccccc--cccEEEEEecceecccCchhhcCCC--CCceeeeechhcccCCCCCCcccc-cccccCCCCcCCCCcCCC
Q 025063 97 KLRIWEFV--EYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTI-GYCQQCPEKVQWPVEMGS 171 (258)
Q Consensus 97 Kl~l~~l~--~ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~g~ 171 (258)
||.+..++ ++|||||||+|++|.+||++||+++ +..+||+.++..... .....++. ++ |.. +.
T Consensus 85 rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~-~~~~~~~~~~~---------~~~--~l 152 (248)
T cd06432 85 ILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKE-MDGFRFWKQGY---------WKS--HL 152 (248)
T ss_pred HHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchh-cccchhhhhhh---------hhh--hc
Confidence 78888653 4899999999999999999999986 345777776431100 00000000 00 000 11
Q ss_pred CCCCCcceeEEEEecCHHHHHHHHH----Hhh---cC-CCCCCCChhHHHHHhccC-ccccCCcccccceeecccCCCcc
Q 025063 172 PPPLYFNAGMFVYEPNLLTYHDLLE----TVK---VT-PPTIFAEQDFLNMYFKDI-YKPIPPTYNLVVAMLWRHLENVD 242 (258)
Q Consensus 172 ~~~~~fNsGvmli~~~~~~~~~l~~----~~~---~~-~~~~~~DQ~~LN~~~~~~-~~~L~~~yN~~~~~~~~~~~~~~ 242 (258)
....|||||||+||+++|+.+.+.+ .++ +. ..+.++|||+||.++.+. ++.||.+||++..+.+. + .
T Consensus 153 ~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~~i~~Lp~~w~~~~~~~~~--~--~ 228 (248)
T cd06432 153 RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQVPIFSLPQEWLWCETWCSD--E--S 228 (248)
T ss_pred CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccCCeEECChHHHHHHHHhcc--c--c
Confidence 2346999999999999998766544 222 22 347789999999999886 99999999997663211 1 2
Q ss_pred CCCceEEEEeeccCC
Q 025063 243 VDKVKVVHYCAAVSI 257 (258)
Q Consensus 243 ~~~~~IiHy~~~~~k 257 (258)
.+.+++|||+..++|
T Consensus 229 ~~~~~~~~~~~~~~~ 243 (248)
T cd06432 229 KKKAKTIDLCNNPLT 243 (248)
T ss_pred cCccceeecccCCCC
Confidence 789999999988765
No 13
>PLN02718 Probable galacturonosyltransferase
Probab=99.94 E-value=5.2e-27 Score=210.88 Aligned_cols=223 Identities=12% Similarity=0.165 Sum_probs=143.9
Q ss_pred CCccHHHHHHHHHHHHhc--CCC-CCEEEEECCCCCHHHHHHHHhC----CCE--EEEecccCC-CCc----hhhhh---
Q 025063 25 NGDYVKGVVGLAKGLRKA--KSE-YPLVVAILPDVPEDHRQILESQ----GCI--VREIEPVYP-PEN----QTEFA--- 87 (258)
Q Consensus 25 d~~y~~~~~vl~~Sl~~~--~~~-~~~~vl~~~~~~~~~~~~L~~~----~~~--i~~v~~~~~-~~~----~~~~~--- 87 (258)
+++|+ ++.|++.|+..+ ++. +.|+ +++++++.+.++.+... +.. ++.++...+ +.. ...+.
T Consensus 320 sDNvl-aasVvInSil~Ns~np~~ivFH-VvTD~is~~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~~~~~~lk~l~s~~ 397 (603)
T PLN02718 320 SDNVL-ACSVVVNSTISSSKEPEKIVFH-VVTDSLNYPAISMWFLLNPPGKATIQILNIDDMNVLPADYNSLLMKQNSHD 397 (603)
T ss_pred cCCce-eEEEEhhhhhhccCCCCcEEEE-EEeCCCCHHHHHHHHHhCCCCCcEEEEEecchhccccccchhhhhhccccc
Confidence 45574 899999999887 343 3344 46889999888766543 222 333332211 110 00111
Q ss_pred -hhhhhhceeeeeccccc-cccEEEEEecceecccCchhhcCCC--CCceeeeechhcccCCCC-CCcccccccccCCCC
Q 025063 88 -MAYYVINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSN-SPQFTIGYCQQCPEK 162 (258)
Q Consensus 88 -~~~~~~~~~Kl~l~~l~-~ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~~~~~-~~~~~~~~~~~~~~~ 162 (258)
..++..+|+||++|++. +++||||||+|++|.+||++||+++ +..+|||.+|.......+ ...+ +++. .|-
T Consensus 398 ~~~~S~~~y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~-lnfs--~p~- 473 (603)
T PLN02718 398 PRYISALNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTF-INFS--DPW- 473 (603)
T ss_pred cccccHHHHHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhh-hhcc--chh-
Confidence 12345789999999975 6999999999999999999999986 346788888743110000 0000 0000 000
Q ss_pred cCCCCcCCCCCCCCcceeEEEEecCHHHHHHH----HHHhhcCCCCCCCChhHHH---HHhccCccccCCcccccceeec
Q 025063 163 VQWPVEMGSPPPLYFNAGMFVYEPNLLTYHDL----LETVKVTPPTIFAEQDFLN---MYFKDIYKPIPPTYNLVVAMLW 235 (258)
Q Consensus 163 ~~~p~~~g~~~~~~fNsGvmli~~~~~~~~~l----~~~~~~~~~~~~~DQ~~LN---~~~~~~~~~L~~~yN~~~~~~~ 235 (258)
+ ...+ .+..+|||+||||||+++|+.+.+ .++++.+....+.|||.|| .+|.|+++.||.+||...-. +
T Consensus 474 i--~~~f-n~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~gri~~LD~rWNv~gLG-~ 549 (603)
T PLN02718 474 V--AKKF-DPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYNQTVALDKRWHVLGLG-H 549 (603)
T ss_pred h--hccc-CCCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHhcCceeecChHHhccCcc-c
Confidence 0 0001 124689999999999999987655 4455554344678999998 89999999999999987532 2
Q ss_pred ccC-CCccCCCceEEEEeeccCCC
Q 025063 236 RHL-ENVDVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 236 ~~~-~~~~~~~~~IiHy~~~~~kp 258 (258)
... ...+.++++||||+| +.||
T Consensus 550 ~~~i~~~~i~~aaIIHYnG-~~KP 572 (603)
T PLN02718 550 ESGVGASDIEQAAVIHYDG-VMKP 572 (603)
T ss_pred cccccccccCCCEEEEECC-CCCc
Confidence 211 112367999999999 7887
No 14
>PLN02523 galacturonosyltransferase
Probab=99.94 E-value=3.5e-26 Score=203.25 Aligned_cols=226 Identities=14% Similarity=0.214 Sum_probs=143.5
Q ss_pred CeEEEEEeecCCccHHHHHHHHHHHHhc-CCCCCEE-EEECCCCCHHHHHHHHh---C-CC--EEEEecccCCCC-----
Q 025063 15 KRAYVTFLAGNGDYVKGVVGLAKGLRKA-KSEYPLV-VAILPDVPEDHRQILES---Q-GC--IVREIEPVYPPE----- 81 (258)
Q Consensus 15 ~~a~vt~l~~d~~y~~~~~vl~~Sl~~~-~~~~~~~-vl~~~~~~~~~~~~L~~---~-~~--~i~~v~~~~~~~----- 81 (258)
-+-|| +.+| | +.++.|.+.|+..+ ++...++ .+++++++...++.+-. . +. ++..|+.+....
T Consensus 248 l~Hy~--ifSd-N-vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~~~~p 323 (559)
T PLN02523 248 LYHYA--IFSD-N-VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLNSSYVP 323 (559)
T ss_pred cceEE--EecC-c-chhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhcccccch
Confidence 34455 3343 4 88999999999987 3333333 44788998776655432 2 22 334454311100
Q ss_pred ------ch------------------h--hhh--hhhhhhceeeeeccccc-cccEEEEEecceecccCchhhcCCC--C
Q 025063 82 ------NQ------------------T--EFA--MAYYVINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAP--D 130 (258)
Q Consensus 82 ------~~------------------~--~~~--~~~~~~~~~Kl~l~~l~-~ydrvlyLD~D~lv~~~l~~Lf~~~--~ 130 (258)
.. . .+. ...+..+|.||++|++. +++||||||+|+||++||++||+++ +
T Consensus 324 vlk~l~s~~~~~~~f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL~g 403 (559)
T PLN02523 324 VLRQLESANLQKFYFENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWKIDMDG 403 (559)
T ss_pred HHHhhhhhhhhhhhccccccccccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHhCcCCC
Confidence 00 0 000 01234678999999985 6999999999999999999999986 4
Q ss_pred CceeeeechhcccCCCCCCcccccccccCCCCcCCCCc-CCC-CCCCCcceeEEEEecCHHHHHHHHHHhh----cCCCC
Q 025063 131 GYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVE-MGS-PPPLYFNAGMFVYEPNLLTYHDLLETVK----VTPPT 204 (258)
Q Consensus 131 ~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~-~~~~~fNsGvmli~~~~~~~~~l~~~~~----~~~~~ 204 (258)
..+|||.||..... .+. ... ....|.. ... ...++||+|||+||+++|+.+++.+.+. .....
T Consensus 404 kv~aAVeDc~~~~~-----r~~-~~l-----n~s~p~i~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~ 472 (559)
T PLN02523 404 KVNGAVETCFGSFH-----RYA-QYL-----NFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENR 472 (559)
T ss_pred ceEEEehhhhhHHH-----HHH-Hhh-----cccchhhhhCcCCCcccccCCcEEEeHHHHHHhchHHHHHHHHHhcccc
Confidence 46788888642100 000 000 0000100 001 2357777799999999999887766533 22345
Q ss_pred CCCChhHHH---HHhccCccccCCcccccceeecccCCC--ccCCCceEEEEeeccCCC
Q 025063 205 IFAEQDFLN---MYFKDIYKPIPPTYNLVVAMLWRHLEN--VDVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 205 ~~~DQ~~LN---~~~~~~~~~L~~~yN~~~~~~~~~~~~--~~~~~~~IiHy~~~~~kp 258 (258)
.+.|||.|| .+|.++++.||.+||+..-.+ . +.. -+.++++||||+| ..||
T Consensus 473 ~l~DqdaLpp~LivF~gri~~LD~rWNvlglGy-~-~~i~~~~i~~paIIHYnG-~~KP 528 (559)
T PLN02523 473 TLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY-N-PSISMDEIRNAAVIHFNG-NMKP 528 (559)
T ss_pred ccccccccchHHHHhcCceEecCchhhccCCcc-C-CCccccccCCCEEEEECC-CCCc
Confidence 789999996 899999999999999864322 1 111 1257899999999 7887
No 15
>PLN02867 Probable galacturonosyltransferase
Probab=99.91 E-value=4.1e-25 Score=196.67 Aligned_cols=160 Identities=19% Similarity=0.325 Sum_probs=109.7
Q ss_pred hhhceeeeeccccc-cccEEEEEecceecccCchhhcCCC--CCceeeeechhcccCCCCCCcccccccccCCCCcCCCC
Q 025063 91 YVINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPV 167 (258)
Q Consensus 91 ~~~~~~Kl~l~~l~-~ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 167 (258)
+..+|.||++|++. +++||||||+|+||++||++||+++ ++.+|||.|..+........++ .++.. ..-|.
T Consensus 329 S~lnYlRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~-~~YlN-----fsnp~ 402 (535)
T PLN02867 329 SLLNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKY-KDYLN-----FSHPL 402 (535)
T ss_pred hHHHHHHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhh-hhhcc-----ccchh
Confidence 34678999999975 6999999999999999999999996 4468999875432110000000 00000 00010
Q ss_pred -cCCC-CCCCCcceeEEEEecCHHHHHHHHH----HhhcCC--CCCCCChhHHHH---HhccCccccCCcccccceeecc
Q 025063 168 -EMGS-PPPLYFNAGMFVYEPNLLTYHDLLE----TVKVTP--PTIFAEQDFLNM---YFKDIYKPIPPTYNLVVAMLWR 236 (258)
Q Consensus 168 -~~g~-~~~~~fNsGvmli~~~~~~~~~l~~----~~~~~~--~~~~~DQ~~LN~---~~~~~~~~L~~~yN~~~~~~~~ 236 (258)
..+. ...+|||+||||||+++|+.+++.+ +++.+. ...+.|||.||. +|.|+|..||.+||+. ...+.
T Consensus 403 i~~~~~p~~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~-gLgy~ 481 (535)
T PLN02867 403 ISSNLDQERCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKGHVHPIDPSWHVA-GLGSR 481 (535)
T ss_pred hhccCCCCCcceecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcCcEEECChhhccc-CCCcc
Confidence 1122 2468999999999999998776644 455432 256789999995 9999999999999984 33333
Q ss_pred cCCCc-c-CCCceEEEEeeccCCC
Q 025063 237 HLENV-D-VDKVKVVHYCAAVSIS 258 (258)
Q Consensus 237 ~~~~~-~-~~~~~IiHy~~~~~kp 258 (258)
.+... + .++++||||+| ..||
T Consensus 482 ~~~~~~~~i~~paIIHYnG-~~KP 504 (535)
T PLN02867 482 PPEVPREILESAAVLHFSG-PAKP 504 (535)
T ss_pred cccchhhhcCCcEEEEECC-CCCc
Confidence 22211 2 57999999999 6788
No 16
>PLN02659 Probable galacturonosyltransferase
Probab=99.91 E-value=6.3e-25 Score=194.74 Aligned_cols=159 Identities=18% Similarity=0.283 Sum_probs=108.5
Q ss_pred hhceeeeeccccc-cccEEEEEecceecccCchhhcCCC--CCceeeeechhcccCCCCCCcccccccccCCCCcCCCCc
Q 025063 92 VINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVE 168 (258)
Q Consensus 92 ~~~~~Kl~l~~l~-~ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 168 (258)
..+|+||++|++. +++||||||+|+||++||++||+++ +..+|||.||.....+....++. .+. ....|..
T Consensus 329 ~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~-~yL-----~~s~p~i 402 (534)
T PLN02659 329 VMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLK-SYL-----NFSHPLI 402 (534)
T ss_pred HHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHH-Hhh-----cccchhh
Confidence 4578899999975 6999999999999999999999996 44678888864211000000000 000 0000100
Q ss_pred C-CC-CCCCCcceeEEEEecCHHHHHHH----HHHhhcC--CCCCCCChhHH---HHHhccCccccCCcccccceeeccc
Q 025063 169 M-GS-PPPLYFNAGMFVYEPNLLTYHDL----LETVKVT--PPTIFAEQDFL---NMYFKDIYKPIPPTYNLVVAMLWRH 237 (258)
Q Consensus 169 ~-g~-~~~~~fNsGvmli~~~~~~~~~l----~~~~~~~--~~~~~~DQ~~L---N~~~~~~~~~L~~~yN~~~~~~~~~ 237 (258)
. .. ...+|||+|||+||+++|+.+++ +++++++ ....+.|||+| |.+|.|+++.||.+||+..- .+..
T Consensus 403 ~~yFn~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g~v~~LD~rWN~~gL-g~~~ 481 (534)
T PLN02659 403 AKNFDPNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGL-GYQE 481 (534)
T ss_pred hhccCccccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcCCEEECChhheecCC-cccc
Confidence 0 11 23579999999999999986544 5556554 23667899999 58899999999999998532 2222
Q ss_pred CCCc-cCCCceEEEEeeccCCC
Q 025063 238 LENV-DVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 238 ~~~~-~~~~~~IiHy~~~~~kp 258 (258)
.... ..++++||||+| ..||
T Consensus 482 ~~~~~~i~~paIIHYnG-~~KP 502 (534)
T PLN02659 482 NTSLADAESAGVVHFNG-RAKP 502 (534)
T ss_pred cccccccCCcEEEEECC-CCCc
Confidence 1112 357999999999 7887
No 17
>PLN02870 Probable galacturonosyltransferase
Probab=99.90 E-value=2.1e-24 Score=191.35 Aligned_cols=160 Identities=21% Similarity=0.364 Sum_probs=109.9
Q ss_pred hhhceeeeeccccc-cccEEEEEecceecccCchhhcCCC--CCceeeeechhcccCCCCCCcccccccccCCCCcCCCC
Q 025063 91 YVINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPV 167 (258)
Q Consensus 91 ~~~~~~Kl~l~~l~-~ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 167 (258)
+..+|.||++|++. +++||||||+|+||++||++||+++ +..+|||.||...+.+....++. .+.. ...|.
T Consensus 327 S~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~-~YfN-----fs~p~ 400 (533)
T PLN02870 327 SLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFR-NYFN-----FSHPL 400 (533)
T ss_pred CHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhh-hhcc-----cccch
Confidence 34678899999975 6999999999999999999999996 44678888864221110000000 0000 00010
Q ss_pred -cCCC-CCCCCcceeEEEEecCHHHHHHH----HHHhhcC--CCCCCCChhHH---HHHhccCccccCCcccccceeecc
Q 025063 168 -EMGS-PPPLYFNAGMFVYEPNLLTYHDL----LETVKVT--PPTIFAEQDFL---NMYFKDIYKPIPPTYNLVVAMLWR 236 (258)
Q Consensus 168 -~~g~-~~~~~fNsGvmli~~~~~~~~~l----~~~~~~~--~~~~~~DQ~~L---N~~~~~~~~~L~~~yN~~~~~~~~ 236 (258)
..+. ...+|||+|||+||+++|+.+++ +++++++ .+..+.|||+| |.+|.|+++.||.+||+..- .+.
T Consensus 401 i~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~~LD~rWN~~gL-gy~ 479 (533)
T PLN02870 401 IAKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGL-GYQ 479 (533)
T ss_pred hhcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcCceEECChHHhcCCC-CCc
Confidence 1122 23689999999999999986555 4555543 24678999999 58999999999999998542 222
Q ss_pred cCCCc-cCCCceEEEEeeccCCC
Q 025063 237 HLENV-DVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 237 ~~~~~-~~~~~~IiHy~~~~~kp 258 (258)
..... ..++++||||+| ..||
T Consensus 480 ~~~~~~~i~~aaIIHY~G-~~KP 501 (533)
T PLN02870 480 SKTNIESVKKAAVIHYNG-QSKP 501 (533)
T ss_pred ccccccccCCcEEEEECC-CCCC
Confidence 21222 267999999999 7888
No 18
>PLN02769 Probable galacturonosyltransferase
Probab=99.90 E-value=1.5e-23 Score=189.46 Aligned_cols=150 Identities=17% Similarity=0.165 Sum_probs=104.6
Q ss_pred hhceeeeeccccc-cccEEEEEecceecccCchhhcCCC--CCceeeeechhcccCCCCCCcccccccccCCCCcCCCCc
Q 025063 92 VINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVE 168 (258)
Q Consensus 92 ~~~~~Kl~l~~l~-~ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 168 (258)
..+|.||++|++. +++||||||+|+||.+||++||+++ +..+|||.+|.... .....| . ..
T Consensus 437 ~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~rl--~~~~~y-----------l---~~ 500 (629)
T PLN02769 437 VFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVRL--GQLKNY-----------L---GD 500 (629)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhhh--hhhhhh-----------h---cc
Confidence 4578899999975 5899999999999999999999986 44688888763210 000000 0 01
Q ss_pred CCC-CCCCCcceeEEEEecCHHHHHHHHH----HhhcC-C----CCCCCChhHHHHHhccCccccCCcccccceeecccC
Q 025063 169 MGS-PPPLYFNAGMFVYEPNLLTYHDLLE----TVKVT-P----PTIFAEQDFLNMYFKDIYKPIPPTYNLVVAMLWRHL 238 (258)
Q Consensus 169 ~g~-~~~~~fNsGvmli~~~~~~~~~l~~----~~~~~-~----~~~~~DQ~~LN~~~~~~~~~L~~~yN~~~~~~~~~~ 238 (258)
.+. +..+|||+||||||+++|+.+.+.+ ++++. . .+...+|+++|.+|.++++.||.+||++.-.+...-
T Consensus 501 ~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g~v~~LD~rWNv~gLG~~~~i 580 (629)
T PLN02769 501 TNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQDLIYPLDDRWVLSGLGHDYGI 580 (629)
T ss_pred cCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcCeEEECCHHHccccccccccc
Confidence 111 2368999999999999998765433 33321 1 244578889999999999999999998642210100
Q ss_pred CCccCCCceEEEEeeccCCC
Q 025063 239 ENVDVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 239 ~~~~~~~~~IiHy~~~~~kp 258 (258)
.....++++||||+| +.||
T Consensus 581 ~~~~i~~paIIHYnG-~~KP 599 (629)
T PLN02769 581 DEQAIKKAAVLHYNG-NMKP 599 (629)
T ss_pred cccccCCcEEEEECC-CCCC
Confidence 111257999999999 7787
No 19
>PLN02742 Probable galacturonosyltransferase
Probab=99.89 E-value=2e-23 Score=185.49 Aligned_cols=156 Identities=15% Similarity=0.217 Sum_probs=108.3
Q ss_pred hhceeeeeccccc-cccEEEEEecceecccCchhhcCCC--CCceeeeechhcccCCCCCCcccccccccCCCCcCCCCc
Q 025063 92 VINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVE 168 (258)
Q Consensus 92 ~~~~~Kl~l~~l~-~ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 168 (258)
..+|.||++|++. +++||||||+|++|.+||++||+++ +..+|||.||.... .....+ +.+. .| +...
T Consensus 338 ~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~f--~ry~~y-LnfS--~p----~i~~ 408 (534)
T PLN02742 338 MLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETF--HRYHKY-LNFS--HP----LISS 408 (534)
T ss_pred HHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhhh--hhhhhh-hccc--ch----hhhc
Confidence 4678899999975 5899999999999999999999996 44688999874211 000000 0000 01 0011
Q ss_pred CCCCCCCCcceeEEEEecCHHHHHHHHHHh----hcCCCCCCCChhHHHH---HhccCccccCCcccccceeecccC-CC
Q 025063 169 MGSPPPLYFNAGMFVYEPNLLTYHDLLETV----KVTPPTIFAEQDFLNM---YFKDIYKPIPPTYNLVVAMLWRHL-EN 240 (258)
Q Consensus 169 ~g~~~~~~fNsGvmli~~~~~~~~~l~~~~----~~~~~~~~~DQ~~LN~---~~~~~~~~L~~~yN~~~~~~~~~~-~~ 240 (258)
...+..+|||+||||||+++|+.+.+.+.+ +.+....+.||+.||. +|.|++..||.+||+..-. +... ..
T Consensus 409 ~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LLaF~g~~~~LD~rWNv~gLG-~~~~v~~ 487 (534)
T PLN02742 409 HFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFYGLTEPLDRRWHVLGLG-YDTNIDP 487 (534)
T ss_pred cCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHHHHcCcceecChhheecccc-cccccch
Confidence 001246899999999999999887665532 2334456789999996 5999999999999996432 2111 11
Q ss_pred ccCCCceEEEEeeccCCC
Q 025063 241 VDVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 241 ~~~~~~~IiHy~~~~~kp 258 (258)
-..++++||||+| +.||
T Consensus 488 ~~i~~aaILHynG-~~KP 504 (534)
T PLN02742 488 RLIESAAVLHFNG-NMKP 504 (534)
T ss_pred hhccCCeEEEECC-CCCc
Confidence 1367999999999 7887
No 20
>PLN02829 Probable galacturonosyltransferase
Probab=99.89 E-value=1.3e-23 Score=188.73 Aligned_cols=154 Identities=16% Similarity=0.214 Sum_probs=107.8
Q ss_pred hhhceeeeeccccc-cccEEEEEecceecccCchhhcCCC--CCceeeeechhcccCCCCCCcccccccccCCCCcCCCC
Q 025063 91 YVINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPV 167 (258)
Q Consensus 91 ~~~~~~Kl~l~~l~-~ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 167 (258)
+..+|+||++|++. +++||||||+|+||++||++||+++ +..+|||.+|.... .....+ .. ...|.
T Consensus 441 S~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~f--~r~~~~-l~--------fs~p~ 509 (639)
T PLN02829 441 SILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESF--HRFDRY-LN--------FSNPL 509 (639)
T ss_pred hHHHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhhh--hhhhhh-hh--------ccchH
Confidence 45678999999985 5899999999999999999999996 44678888864210 000000 00 00010
Q ss_pred c-CCC-CCCCCcceeEEEEecCHHHHHHHH----HHhhcCCCCCCCChhHHHHH---hccCccccCCcccccceeecccC
Q 025063 168 E-MGS-PPPLYFNAGMFVYEPNLLTYHDLL----ETVKVTPPTIFAEQDFLNMY---FKDIYKPIPPTYNLVVAMLWRHL 238 (258)
Q Consensus 168 ~-~g~-~~~~~fNsGvmli~~~~~~~~~l~----~~~~~~~~~~~~DQ~~LN~~---~~~~~~~L~~~yN~~~~~~~~~~ 238 (258)
. .+. ...+|||+|||+||+++|+.+.+. ++++.+..-...||+.||.. |.|+++.||.+||+..-. +. +
T Consensus 510 i~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlgaLPp~Ll~F~g~i~~LD~rWNv~GLG-y~-~ 587 (639)
T PLN02829 510 ISKNFDPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGTLPPGLITFWKRTYPLDRSWHVLGLG-YN-P 587 (639)
T ss_pred hhhccCCcccceecceEEEeHHHHHHhChHHHHHHHHHHccCCccccccCCChHHHHhcCceEecChhheecCCC-CC-c
Confidence 0 011 235899999999999999876654 44444333346999999975 699999999999997642 22 2
Q ss_pred CCc--cCCCceEEEEeeccCCC
Q 025063 239 ENV--DVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 239 ~~~--~~~~~~IiHy~~~~~kp 258 (258)
... ..++++||||+| ..||
T Consensus 588 ~v~~~~i~~aaIIHynG-~~KP 608 (639)
T PLN02829 588 NVNQRDIERAAVIHYNG-NMKP 608 (639)
T ss_pred ccchhcccCCeEEEECC-CCCc
Confidence 222 367899999999 6887
No 21
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=99.87 E-value=7.1e-23 Score=183.79 Aligned_cols=153 Identities=16% Similarity=0.212 Sum_probs=108.9
Q ss_pred hhceeeeeccccc-cccEEEEEecceecccCchhhcCCC--CCceeeeechhcccCCCCCCcccccccccCCCCcCCCCc
Q 025063 92 VINYSKLRIWEFV-EYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVE 168 (258)
Q Consensus 92 ~~~~~Kl~l~~l~-~ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 168 (258)
..+|.||++|++. +++||||||+|+||++||++||+++ +..+||+.+|..+... ...+ .. ...|..
T Consensus 460 ~lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f~r--~~~y-ln--------fs~P~i 528 (657)
T PLN02910 460 MLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESFHR--FDKY-LN--------FSNPKI 528 (657)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhhhh--hhhh-hc--------cCChhh
Confidence 4578999999975 5899999999999999999999996 4457788876432100 0000 00 000100
Q ss_pred C-CC-CCCCCcceeEEEEecCHHHHHHHHHH---h-hcCCCCCCCChhHHH---HHhccCccccCCcccccceeecccCC
Q 025063 169 M-GS-PPPLYFNAGMFVYEPNLLTYHDLLET---V-KVTPPTIFAEQDFLN---MYFKDIYKPIPPTYNLVVAMLWRHLE 239 (258)
Q Consensus 169 ~-g~-~~~~~fNsGvmli~~~~~~~~~l~~~---~-~~~~~~~~~DQ~~LN---~~~~~~~~~L~~~yN~~~~~~~~~~~ 239 (258)
. .+ ...+|||+|||+||+++|+.+.+.+. . +.+....+.||+.|| .+|.|++..||.+||...-. +. +.
T Consensus 529 ~~yFNs~aCyfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgLLvF~g~i~pLD~rWNv~GLG-yd-~~ 606 (657)
T PLN02910 529 SENFDPNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNLTYPLDRSWHVLGLG-YD-PA 606 (657)
T ss_pred hhccCCCCceeecccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHHHHHhCceeecCchheecCCC-CC-cc
Confidence 0 11 24689999999999999987766553 2 223456789999999 69999999999999997532 21 22
Q ss_pred Cc--cCCCceEEEEeeccCCC
Q 025063 240 NV--DVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 240 ~~--~~~~~~IiHy~~~~~kp 258 (258)
.. ..++++||||+| ..||
T Consensus 607 v~~~~i~~AAVLHynG-~~KP 626 (657)
T PLN02910 607 LNQTEIENAAVVHYNG-NYKP 626 (657)
T ss_pred cccccccCcEEEEeCC-CCCc
Confidence 22 367899999999 7887
No 22
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.70 E-value=1.1e-18 Score=143.98 Aligned_cols=183 Identities=23% Similarity=0.305 Sum_probs=117.0
Q ss_pred EEEECCCCCHHHHHHHHhCCCEEEEecccCCCCch-----hhhhhhhhhhceeeeeccccccccEEEEEecceecccCch
Q 025063 49 VVAILPDVPEDHRQILESQGCIVREIEPVYPPENQ-----TEFAMAYYVINYSKLRIWEFVEYEKMIYLDGDIQVFDNID 123 (258)
Q Consensus 49 ~vl~~~~~~~~~~~~L~~~~~~i~~v~~~~~~~~~-----~~~~~~~~~~~~~Kl~l~~l~~ydrvlyLD~D~lv~~~l~ 123 (258)
.++...++.+...+.|...|..+..|++++..+.. ......+|..+++||.+|++.+||||||||+|.|+++++|
T Consensus 106 ~vL~mkg~d~wk~d~l~ldga~~~~vq~i~~hevv~~~~di~~~~~rw~~mftKLrVfeqtEyDRvifLDsDaivlknmD 185 (368)
T COG5597 106 EVLTMKGCDLWKTDLLPLDGAFNARVQRINVHEVVPFTKDIKPDFHRWLDMFTKLRVFEQTEYDRVIFLDSDAIVLKNMD 185 (368)
T ss_pred eehhhcccchhhhhccccchHHHHHhccchHhhhhhhhhccCcCcCcHHHHhHHHHhhhhhhhceEEEeccchHHhhhhH
Confidence 45556677777667776666544444444432110 1112245678999999999999999999999999999999
Q ss_pred hhcCCCCCceeeeechhcccCCCCCCcccccc------------cc--cCCCCcCCCC-------cCCCCCCCCcceeEE
Q 025063 124 HLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGY------------CQ--QCPEKVQWPV-------EMGSPPPLYFNAGMF 182 (258)
Q Consensus 124 ~Lf~~~~~~iaa~~d~~~~~~~~~~~~~~~~~------------~~--~~~~~~~~p~-------~~g~~~~~~fNsGvm 182 (258)
+||+.|-..++|.+|.+..+..-|.|+-.+.. .+ +.| ..-|+. ...+.-..+||||.|
T Consensus 186 klFd~Pvyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg~~r~~ly~P-ylf~a~~dq~~~hstpP~fk~~FnagLm 264 (368)
T COG5597 186 KLFDYPVYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYGKMRAALYAP-YLFWARTDQTFLHSTPPDFKLKFNAGLM 264 (368)
T ss_pred HHhcchhhhhccCCchhhCHHHhcCCCCccceeecHHHHhhcccHhhhccc-cccccccCCcccccCCCcHhhhhccCce
Confidence 99999855678887765433111111110000 00 001 011111 111112579999999
Q ss_pred EEecCHHHHHHHHHHhh-c-CCCCCCCChhHHHHHhcc----CccccCCcccccce
Q 025063 183 VYEPNLLTYHDLLETVK-V-TPPTIFAEQDFLNMYFKD----IYKPIPPTYNLVVA 232 (258)
Q Consensus 183 li~~~~~~~~~l~~~~~-~-~~~~~~~DQ~~LN~~~~~----~~~~L~~~yN~~~~ 232 (258)
+++|++..+.+++...- + .++.....|.++|..++. -|..++++||..+.
T Consensus 265 v~~Psk~hm~riv~~alPklydda~mmeqsllnlaYn~~g~FPwerld~~yNG~wa 320 (368)
T COG5597 265 VGLPSKMHMLRIVWFALPKLYDDADMMEQSLLNLAYNYEGFFPWERLDPRYNGYWA 320 (368)
T ss_pred eecchHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHhhhccCchhhcCcccccccc
Confidence 99999999999887652 1 123456689999987763 48899999997654
No 23
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=98.71 E-value=1.8e-08 Score=89.33 Aligned_cols=162 Identities=34% Similarity=0.528 Sum_probs=112.4
Q ss_pred eeeeeccccccccEEEEEecceecccCchhhcCCCCCceeeeechhcccCCCCCCcccccccccCCCCcC---CCCcCCC
Q 025063 95 YSKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQ---WPVEMGS 171 (258)
Q Consensus 95 ~~Kl~l~~l~~ydrvlyLD~D~lv~~~l~~Lf~~~~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~p~~~g~ 171 (258)
+.++.++.+.++.+.+|++.|+-...++++.++.....-.+...+++-..+.+..++..+.|...++..- |+.....
T Consensus 114 ~~~~~~~~~~~~~a~i~~~~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~~~~~~~ 193 (369)
T KOG1950|consen 114 DDKIKIWRLIEDGAAIYLVDDIQRFRNDDANFDVPNELNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSNWPDLFAT 193 (369)
T ss_pred ccceeecceeccCceEEEecchhhccCccccccccchhcccccceeeecccccceEEeccchhcCChhhhhhhchhhccC
Confidence 5678888888899999999999999999999999643333444444333344444443444443333222 2222111
Q ss_pred -CCCCCcceeEEEEecCHHHHHHHHHHhhcCCCCCCCChhHHHHHhccCccccCCcccccceeecccCCCcc-----CCC
Q 025063 172 -PPPLYFNAGMFVYEPNLLTYHDLLETVKVTPPTIFAEQDFLNMYFKDIYKPIPPTYNLVVAMLWRHLENVD-----VDK 245 (258)
Q Consensus 172 -~~~~~fNsGvmli~~~~~~~~~l~~~~~~~~~~~~~DQ~~LN~~~~~~~~~L~~~yN~~~~~~~~~~~~~~-----~~~ 245 (258)
.....||+|.|++.|+...++.+++.......+.+.||+++|.+|...-...|..+|......|+++..-+ ...
T Consensus 194 ~~l~~~~n~~~~v~~ps~~~~~~~~~~~~~~~~~~~~~q~~l~~~f~~~~~~~~~~~n~~~~~~~~~p~~~~l~~~~~~~ 273 (369)
T KOG1950|consen 194 NILPLIFNSGLLVFEPSLCNYKDLMEFSEEFESYNGADQGFLHLIFSWIPDRPPPSVNLNLAKLWRHPKKNDLSRASSVL 273 (369)
T ss_pred CCccceeccCccccCCCccchhhHHHhhcccCCCCCccchhhHHHhhcccCCCcccccccccccccCccccchhhccccc
Confidence 12345999999999999999998888877777889999999999987544888899999888777663222 223
Q ss_pred ceEEEEeeccC
Q 025063 246 VKVVHYCAAVS 256 (258)
Q Consensus 246 ~~IiHy~~~~~ 256 (258)
...+||.|.++
T Consensus 274 ~~~~~y~~~~~ 284 (369)
T KOG1950|consen 274 RYALHYLGANK 284 (369)
T ss_pred chhhhccccCC
Confidence 34569999653
No 24
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=98.56 E-value=2.4e-07 Score=78.74 Aligned_cols=109 Identities=19% Similarity=0.319 Sum_probs=75.2
Q ss_pred eEEEEEeecCCccHHHHHHHHHHHHhcCCCCCEEEEEC--CCCCHHHHHHHHh-CCCEEEEecccCCCCchh-hhhhhhh
Q 025063 16 RAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLVVAIL--PDVPEDHRQILES-QGCIVREIEPVYPPENQT-EFAMAYY 91 (258)
Q Consensus 16 ~a~vt~l~~d~~y~~~~~vl~~Sl~~~~~~~~~~vl~~--~~~~~~~~~~L~~-~~~~i~~v~~~~~~~~~~-~~~~~~~ 91 (258)
..+|+ ++.+.|+..+..++..||+.+.+.||-|++. ++++++.++.|.. ..+..+++.++..++... .+...
T Consensus 2 rGIVi--~~g~~~~~~a~~lI~~LR~~g~~LPIEI~~~~~~dl~~~~~~~l~~~q~v~~vd~~~~~~~~~~~~~~~~~-- 77 (271)
T PF11051_consen 2 RGIVI--TAGDKYLWLALRLIRVLRRLGNTLPIEIIYPGDDDLSKEFCEKLLPDQDVWFVDASCVIDPDYLGKSFSKK-- 77 (271)
T ss_pred CEEEE--EecCccHHHHHHHHHHHHHhCCCCCEEEEeCCccccCHHHHHHHhhhhhhheecceEEeeccccccccccC--
Confidence 35664 3466999999999999999999999988776 6799988888765 223333333332221111 01100
Q ss_pred hhce-eeeeccccccccEEEEEecceecccCchhhcCCCC
Q 025063 92 VINY-SKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFDAPD 130 (258)
Q Consensus 92 ~~~~-~Kl~l~~l~~ydrvlyLD~D~lv~~~l~~Lf~~~~ 130 (258)
.| .|.++--...++.||+||+|++.+.|++.||+.+.
T Consensus 78 --~~~~K~lA~l~ssFeevllLDaD~vpl~~p~~lF~~~~ 115 (271)
T PF11051_consen 78 --GFQNKWLALLFSSFEEVLLLDADNVPLVDPEKLFESEE 115 (271)
T ss_pred --CchhhhhhhhhCCcceEEEEcCCcccccCHHHHhcCcc
Confidence 22 34444445689999999999999999999999864
No 25
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=98.37 E-value=1.9e-06 Score=70.55 Aligned_cols=173 Identities=16% Similarity=0.198 Sum_probs=95.2
Q ss_pred CHHHHHHHHhCCCEEEEeccc--CCCCchhhhh-hhhhhhceeeeeccc-ccc-ccEEEEEecceecccCchhhcCCCCC
Q 025063 57 PEDHRQILESQGCIVREIEPV--YPPENQTEFA-MAYYVINYSKLRIWE-FVE-YEKMIYLDGDIQVFDNIDHLFDAPDG 131 (258)
Q Consensus 57 ~~~~~~~L~~~~~~i~~v~~~--~~~~~~~~~~-~~~~~~~~~Kl~l~~-l~~-ydrvlyLD~D~lv~~~l~~Lf~~~~~ 131 (258)
+++..+.+++.+.....+... ........+. ..+...++.|..+-. +++ --.|+++|+|+++++|+.++|+.++.
T Consensus 12 D~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~~~~~~ 91 (212)
T PF03407_consen 12 DEETYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYFENPDA 91 (212)
T ss_pred CHHHHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhhccCCC
Confidence 356677788877764433322 1111111111 123345566654433 332 24699999999999999999943333
Q ss_pred ceeeeechhcccCCCCCCcccccccccCCCCcCCCCcCCCCCCCCcceeEEEEecCHHH---HHHHHHHhhcCCCCCCCC
Q 025063 132 YFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMGSPPPLYFNAGMFVYEPNLLT---YHDLLETVKVTPPTIFAE 208 (258)
Q Consensus 132 ~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~fNsGvmli~~~~~~---~~~l~~~~~~~~~~~~~D 208 (258)
.+....|..... . . ......+|+|++.++++... ++++.+.+... ....|
T Consensus 92 Di~~~~d~~~~~--------------------~---~--~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~--~~~~D 144 (212)
T PF03407_consen 92 DILFSSDGWDGT--------------------N---S--DRNGNLVNTGFYYFRPTPRTIAFLEDWLERMAES--PGCWD 144 (212)
T ss_pred ceEEecCCCccc--------------------c---h--hhcCCccccceEEEecCHHHHHHHHHHHHHHHhC--CCcch
Confidence 343333421100 0 0 01124569999999999965 45555555443 23359
Q ss_pred hhHHHHHhccC--------ccccCCcccccceeecccCCCcc----CCCceEEEEeeccC
Q 025063 209 QDFLNMYFKDI--------YKPIPPTYNLVVAMLWRHLENVD----VDKVKVVHYCAAVS 256 (258)
Q Consensus 209 Q~~LN~~~~~~--------~~~L~~~yN~~~~~~~~~~~~~~----~~~~~IiHy~~~~~ 256 (258)
|.++|.++.+. +..||...-.....++.....|. ..+|.++|.....+
T Consensus 145 Q~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~~~~~~~~~~~~~p~~vH~n~~~g 204 (212)
T PF03407_consen 145 QQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQSRDWAWVPTKNKPYIVHANCCDG 204 (212)
T ss_pred HHHHHHHHHhcccCCcCcEEEEeCHHHeeccccceeecchhhhhccccccceEEEcCCCC
Confidence 99999999763 44566443211111111111121 36899999987643
No 26
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=97.66 E-value=0.00034 Score=68.74 Aligned_cols=193 Identities=13% Similarity=0.150 Sum_probs=113.0
Q ss_pred EEEEEeecCCccHHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHH----hCCCEEEEecccCCCCchh--hhhhh
Q 025063 17 AYVTFLAGNGDYVKGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILE----SQGCIVREIEPVYPPENQT--EFAMA 89 (258)
Q Consensus 17 a~vt~l~~d~~y~~~~~vl~~Sl~~~~-~~~~~~vl~~~~~~~~~~~~L~----~~~~~i~~v~~~~~~~~~~--~~~~~ 89 (258)
-+.+ +++..-|=..+..++.|+.++. +...|++ +..-+|+..++.+. +++.+..-|. ..+|.... ..+.
T Consensus 1183 NIFS-vASGHLYERflrIMm~SvlknTktpVKFWf-LkNyLSPtFKe~iP~mA~eYnFeyElv~-YkWPrWLhqQ~EKQ- 1258 (1470)
T KOG1879|consen 1183 NIFS-VASGHLYERFLRIMMLSVLKNTKTPVKFWF-LKNYLSPTFKESIPHMAKEYNFEYELVQ-YKWPRWLHQQTEKQ- 1258 (1470)
T ss_pred EEEe-eccccHHHHHHHHHHHHHHhCCCCceeEEe-ehhhcChHHHHHHHHHHHHhCceEEEEE-ecCchhhhhhhhhh-
Confidence 3444 6678889999999999999875 3455655 55678887776553 3455433232 34553211 1111
Q ss_pred hhhhce-eeeeccc-c--ccccEEEEEecceecccCchhhcCCC--CCceeeeechhcccCCCCCCcc--c-ccccccCC
Q 025063 90 YYVINY-SKLRIWE-F--VEYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQF--T-IGYCQQCP 160 (258)
Q Consensus 90 ~~~~~~-~Kl~l~~-l--~~ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~~~~~~~~~--~-~~~~~~~~ 160 (258)
...| +|+...+ | +..+||||+|+|-+|+.|++||.+++ +.+.|=++=|... . .+..| | .|+
T Consensus 1259 --RiiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR--~-EMDGyRFWK~GY----- 1328 (1470)
T KOG1879|consen 1259 --RIIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSR--R-EMDGYRFWKQGY----- 1328 (1470)
T ss_pred --hhhhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCccccCcccccc--c-cccchhHHhhhH-----
Confidence 1122 4543333 4 36899999999999999999998886 2233333322111 1 11111 1 111
Q ss_pred CCcCCCCcCCCCCCCCcceeEEEEecCHHHH----HHHHHH---hhc-CCCCCCCChhHHHHHhcc-CccccCCcccc
Q 025063 161 EKVQWPVEMGSPPPLYFNAGMFVYEPNLLTY----HDLLET---VKV-TPPTIFAEQDFLNMYFKD-IYKPIPPTYNL 229 (258)
Q Consensus 161 ~~~~~p~~~g~~~~~~fNsGvmli~~~~~~~----~~l~~~---~~~-~~~~~~~DQ~~LN~~~~~-~~~~L~~~yN~ 229 (258)
|...+ ....|.=|...|+++++-+. +++--. +.+ ..++.--|||+-|..... .++.||..|=+
T Consensus 1329 ----W~~hL--~grkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDLPNnm~hqVpIkSLPqeWLW 1400 (1470)
T KOG1879|consen 1329 ----WKKHL--RGRKYHISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNLDQDLPNNMQHQVPIKSLPQEWLW 1400 (1470)
T ss_pred ----HHHHh--ccCccccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhccccccccceeecccccCCcchhh
Confidence 21111 12578889999999977321 222222 222 224667899999987654 58899988654
No 27
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=97.15 E-value=0.0017 Score=57.22 Aligned_cols=128 Identities=17% Similarity=0.131 Sum_probs=72.0
Q ss_pred ccccEEEEEecceecccCchhhcCCCCCceeeeechhcccCCCCCCcccccccccCCCCcCCCCcC-CCCCCCCcceeEE
Q 025063 104 VEYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEM-GSPPPLYFNAGMF 182 (258)
Q Consensus 104 ~~ydrvlyLD~D~lv~~~l~~Lf~~~~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-g~~~~~~fNsGvm 182 (258)
.++|-+-|||+|++|++. -|++|...+. +. |. . -.+|+..+ ..+.-..+|+|++
T Consensus 196 PeaEWiWWLDsDALImNm---sfelPlery~---~~--Nl-------------V----ihg~~~~l~~~kdW~GLNtGsF 250 (429)
T PLN03182 196 PEVEWIWWMDSDALFTDM---TFEIPLEKYE---GY--NL-------------V----IHGWDELVYDQKSWIGLNTGSF 250 (429)
T ss_pred CCceEEEEecCCceeecC---CCCCCHhHcC---Cc--Ce-------------e----eccchhhheeccccCccceeeE
Confidence 478999999999999862 2333311000 00 00 0 01222111 1123368999999
Q ss_pred EEecCHHHHHHHHHHh--------------------hcCCCCCCCChhHHHHHhc-c--Cc---cccCCcccccceee--
Q 025063 183 VYEPNLLTYHDLLETV--------------------KVTPPTIFAEQDFLNMYFK-D--IY---KPIPPTYNLVVAML-- 234 (258)
Q Consensus 183 li~~~~~~~~~l~~~~--------------------~~~~~~~~~DQ~~LN~~~~-~--~~---~~L~~~yN~~~~~~-- 234 (258)
+|+.++|..+-+-.++ ...+.+...||.+|-+++. + +| ..|-..|-+..-..
T Consensus 251 LIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~y~l~Gyw~~i 330 (429)
T PLN03182 251 LIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYYLHGYWVGL 330 (429)
T ss_pred EEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeecceeccccHHH
Confidence 9999998654443322 1222456799999999883 2 22 35555555443211
Q ss_pred ---cc------cCCCccCCCceEEEEeeccCCC
Q 025063 235 ---WR------HLENVDVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 235 ---~~------~~~~~~~~~~~IiHy~~~~~kp 258 (258)
++ ++..-+..-|-|.||+| +||
T Consensus 331 v~~yee~~~~~~~g~gd~rwPfvtHF~G--ckp 361 (429)
T PLN03182 331 VDRYEEMMEKYHPGLGDDRWPFVTHFVG--CKP 361 (429)
T ss_pred HHHHHHHHHhcCCCCCCcccceeEeecc--cee
Confidence 00 12222356789999998 766
No 28
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=96.78 E-value=0.013 Score=44.49 Aligned_cols=63 Identities=14% Similarity=0.223 Sum_probs=54.9
Q ss_pred ccccccCCCCCCCCeEEEEEeecCCccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhC
Q 025063 2 SFVEITEPIMNVPKRAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQ 67 (258)
Q Consensus 2 ~~~~~~~~~~~~~~~a~vt~l~~d~~y~~~~~vl~~Sl~~~~~~~~~~vl~~~~~~~~~~~~L~~~ 67 (258)
+|++++++....+..++|| ++.++++..+.-++.|++++.|...+ ++++=|++++..+.|++.
T Consensus 48 ~~v~l~~~~~n~~~vvfVS--a~S~~h~~~~~~~i~si~~~~P~~k~-ilY~LgL~~~~i~~L~~~ 110 (142)
T PF07801_consen 48 PFVDLSSSSKNSSDVVFVS--ATSDNHFNESMKSISSIRKFYPNHKI-ILYDLGLSEEQIKKLKKN 110 (142)
T ss_pred cceecccccccCCccEEEE--EecchHHHHHHHHHHHHHHHCCCCcE-EEEeCCCCHHHHHHHHhc
Confidence 5788999999999999998 45689999999999999999998776 448889999999999874
No 29
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=95.60 E-value=0.0065 Score=50.71 Aligned_cols=77 Identities=17% Similarity=0.125 Sum_probs=0.0
Q ss_pred CCCCcceeEEEEecCHHHHHHHHHHhhc----CCC---CCCCChhHHHHHhcc------CccccCCc-ccccceeecccC
Q 025063 173 PPLYFNAGMFVYEPNLLTYHDLLETVKV----TPP---TIFAEQDFLNMYFKD------IYKPIPPT-YNLVVAMLWRHL 238 (258)
Q Consensus 173 ~~~~fNsGvmli~~~~~~~~~l~~~~~~----~~~---~~~~DQ~~LN~~~~~------~~~~L~~~-yN~~~~~~~~~~ 238 (258)
...++|+|+++++.+.|... +++.... ... ..+.||++|..+++. +...+|.+ .|.... ...
T Consensus 141 d~~gLNtGsFliRns~ws~~-fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~~~nsy~~---~~~ 216 (239)
T PF05637_consen 141 DWNGLNTGSFLIRNSPWSRD-FLDAWADPLYRNYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQRWFNSYPE---DEC 216 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccc
Confidence 45789999999999998754 3333221 112 246899999988864 34455543 222111 001
Q ss_pred CCccCCCceEEEEee
Q 025063 239 ENVDVDKVKVVHYCA 253 (258)
Q Consensus 239 ~~~~~~~~~IiHy~~ 253 (258)
.....+..-|+||+|
T Consensus 217 ~~~~~~GDfvvhfaG 231 (239)
T PF05637_consen 217 NYQYKEGDFVVHFAG 231 (239)
T ss_dssp ---------------
T ss_pred ccccccccccccccc
Confidence 111245678999998
No 30
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=93.29 E-value=0.098 Score=45.91 Aligned_cols=72 Identities=15% Similarity=0.183 Sum_probs=46.7
Q ss_pred EEEecceecccCchhhcCCCCCceeeeechhcccCCCCCCcccccccccCCCCcCCCCcCCCCCCCCcceeEEEEecCHH
Q 025063 110 IYLDGDIQVFDNIDHLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMGSPPPLYFNAGMFVYEPNLL 189 (258)
Q Consensus 110 lyLD~D~lv~~~l~~Lf~~~~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~fNsGvmli~~~~~ 189 (258)
||||+|+||++++..|=+. ||..++. . .-.+.|.+||.+.....
T Consensus 242 vYLDTDvIvLksl~~l~N~----ig~~~~~-----------------------~---------~~~~lnnavl~F~k~Hp 285 (409)
T KOG1928|consen 242 VYLDTDVIVLKSLSNLRNV----IGVDPAT-----------------------Q---------AWTRLNNAVLIFDKNHP 285 (409)
T ss_pred EEeeccEEEeccccccccc----ccccchh-----------------------h---------HHHhhcCceeecCCCCH
Confidence 7999999999999987654 2200000 0 01568889999999987
Q ss_pred HHHHH-HHHhhcCCCCCCCCh--hHHHHHhc
Q 025063 190 TYHDL-LETVKVTPPTIFAEQ--DFLNMYFK 217 (258)
Q Consensus 190 ~~~~l-~~~~~~~~~~~~~DQ--~~LN~~~~ 217 (258)
.-.++ -|+...++...++-| +++.-+++
T Consensus 286 fl~~cl~eF~~tfNg~~WG~NGP~LvTRVak 316 (409)
T KOG1928|consen 286 FLLECLREFALTYNGNIWGHNGPYLVTRVAK 316 (409)
T ss_pred HHHHHHHHHHHhccccccccCCcHHHHHHHH
Confidence 65544 456666554444444 56666654
No 31
>PLN03181 glycosyltransferase; Provisional
Probab=92.87 E-value=0.43 Score=42.57 Aligned_cols=102 Identities=17% Similarity=0.084 Sum_probs=56.7
Q ss_pred ccccEEEEEecceecccCchhhcCCCCCceeeeechhcccCCCCCCcccccccccCCCCcCCCCcCC-CCCCCCcceeEE
Q 025063 104 VEYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMG-SPPPLYFNAGMF 182 (258)
Q Consensus 104 ~~ydrvlyLD~D~lv~~~l~~Lf~~~~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g-~~~~~~fNsGvm 182 (258)
.+++-+-|||+|++|++. -+.++...+ .+. + . ...+||..+- ...-..+|+|++
T Consensus 197 PeAEWfWWLDsDALIMNp---~~sLPl~ry---~~~--N-------------L----vvhg~p~~vy~~qdw~GlN~GsF 251 (453)
T PLN03181 197 PEAEWIWWVDSDAVFTDM---DFKLPLHRY---RDH--N-------------L----VVHGWPKLIYEKRSWTALNAGVF 251 (453)
T ss_pred CCceEEEEecCCceeecC---CCCCCHhhc---CCc--c-------------c----cccCCcccccccccccccceeee
Confidence 468999999999999954 122221100 000 0 0 0023332211 123478999999
Q ss_pred EEecCHHHHHHHHHHhh--------------------cCCCCCCCChhHHHHHhcc---C---ccccCCccccc
Q 025063 183 VYEPNLLTYHDLLETVK--------------------VTPPTIFAEQDFLNMYFKD---I---YKPIPPTYNLV 230 (258)
Q Consensus 183 li~~~~~~~~~l~~~~~--------------------~~~~~~~~DQ~~LN~~~~~---~---~~~L~~~yN~~ 230 (258)
+|+.++|..+-|-.+.. ......-.||.+|-+++-. + -..|...|-++
T Consensus 252 LIRNcqWSl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~~~~w~~k~ylE~~yy~~ 325 (453)
T PLN03181 252 LIRNCQWSLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKHKEKWGDKIYLEGEYYFE 325 (453)
T ss_pred EEecCHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhccchhccceeeecceeee
Confidence 99999986544433321 1122456899999987631 2 23555555554
No 32
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=92.71 E-value=0.92 Score=38.20 Aligned_cols=193 Identities=14% Similarity=0.123 Sum_probs=90.7
Q ss_pred CeEEEEEeecCCccHHHHHHHHHHHHhcC-CCCCE-EEEECCCCCHHHHHHHHh-CCCEEEEecccCCCCchhhhhhhhh
Q 025063 15 KRAYVTFLAGNGDYVKGVVGLAKGLRKAK-SEYPL-VVAILPDVPEDHRQILES-QGCIVREIEPVYPPENQTEFAMAYY 91 (258)
Q Consensus 15 ~~a~vt~l~~d~~y~~~~~vl~~Sl~~~~-~~~~~-~vl~~~~~~~~~~~~L~~-~~~~i~~v~~~~~~~~~~~~~~~~~ 91 (258)
+.++ |++|+ ..|.....-.+.|-.++- +.++. +.+.+|.-..--.-.|.. ....+..|.. . .+|.
T Consensus 35 tIgl-~vfat-GkY~~f~~~F~~SAEk~Fm~g~~v~YyVFTD~~~~~p~v~lg~~r~~~V~~v~~-----~-----~~W~ 102 (271)
T cd02515 35 TIGL-TVFAV-GKYTEFLERFLESAEKHFMVGYRVIYYIFTDKPAAVPEVELGPGRRLTVLKIAE-----E-----SRWQ 102 (271)
T ss_pred EEEE-EEEEe-ccHHHHHHHHHHHHHHhccCCCeeEEEEEeCCcccCcccccCCCceeEEEEecc-----c-----cCCc
Confidence 4454 33544 689988888888887762 44443 333455322100001100 0112222210 0 1122
Q ss_pred hhceeeeecc-----cc--ccccEEEEEecceecccCch-hhcCCCCCceeeeechhcccCCCCCCcccccccccCCCCc
Q 025063 92 VINYSKLRIW-----EF--VEYEKMIYLDGDIQVFDNID-HLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKV 163 (258)
Q Consensus 92 ~~~~~Kl~l~-----~l--~~ydrvlyLD~D~lv~~~l~-~Lf~~~~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (258)
..+..|+.+. +. .++|=+.++|+|+++.+++. |.+. ..+|......-.. ....+-++....+ ..
T Consensus 103 ~~sl~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig~E~Lg---~lva~lHp~~y~~---~~~~fpYERrp~S--~A 174 (271)
T cd02515 103 DISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFGVETLG---DSVAQLHPWWYGK---PRKQFPYERRPSS--AA 174 (271)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCEEEEeeCCceEeecCCHHHhh---hhheecChhhhcC---CCCCCCCcCCCCc--cc
Confidence 2344444433 22 37899999999999998876 3331 1233322211000 0000111111000 01
Q ss_pred CCCCcCCCCCCCCcceeEEEEecCHHHHHHHHHH--------hhcCCCCCCCChhHHHHHhccC--ccccCCcccccce
Q 025063 164 QWPVEMGSPPPLYFNAGMFVYEPNLLTYHDLLET--------VKVTPPTIFAEQDFLNMYFKDI--YKPIPPTYNLVVA 232 (258)
Q Consensus 164 ~~p~~~g~~~~~~fNsGvmli~~~~~~~~~l~~~--------~~~~~~~~~~DQ~~LN~~~~~~--~~~L~~~yN~~~~ 232 (258)
-.|.. ..+-|+-+|+.-=.+ ..+-++.+. .+++-...+.|..-||.+|-.+ .+.||+.|++...
T Consensus 175 yIp~~---eGdfYy~Ga~~GG~~--~~vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNkYf~~~Kp~KiLSPeY~w~e~ 248 (271)
T cd02515 175 YIPEG---EGDFYYHGAVFGGSV--EEVYRLTRACHEGILADKANGIEARWHDESHLNKYFLLHKPTKVLSPEYLWDDR 248 (271)
T ss_pred cccCC---CCCeEEeeeecCccH--HHHHHHHHHHHHHHHHHHhCCceEEeecHhHhHHHHhhCCCCeecChhhcCCcc
Confidence 11211 224566666653222 223233222 2222123689999999988653 7999999998643
No 33
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=88.46 E-value=1.4 Score=38.81 Aligned_cols=143 Identities=16% Similarity=0.101 Sum_probs=75.1
Q ss_pred cccccEEEEEecceecccCchhhcCC---CCC-ceeeeechhcccCCCCCCccccccccc---CCCCcCCCCcCCCCCCC
Q 025063 103 FVEYEKMIYLDGDIQVFDNIDHLFDA---PDG-YFYAVMDCFCEKTWSNSPQFTIGYCQQ---CPEKVQWPVEMGSPPPL 175 (258)
Q Consensus 103 l~~ydrvlyLD~D~lv~~~l~~Lf~~---~~~-~iaa~~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~p~~~g~~~~~ 175 (258)
..+.+=+=+||.|+++++.--+|=+. ++. ...+.++ ..+.+.....+....+.. .++.+ ..++.....
T Consensus 173 yP~AeWIWWlD~DAlimn~~lsL~~~ilk~~~L~~~l~~n--d~~~~~~~n~~~~~~~~~~~d~~~~~---~~ii~qD~n 247 (364)
T KOG4748|consen 173 YPDAEWIWWLDQDALIMNPDLSLQDHILKPENLVTHLLRN--DQKSINPLNIFRLRPRTPSLDDLEDI---AFIIPQDCN 247 (364)
T ss_pred CCCCcEEEEecccchhhCcccchhHHhcCHHHHHHhhccc--cccccccCCccccccccccccchhhh---ceecccCCC
Confidence 45789999999999999643333221 111 1112221 001111111111111110 11111 123344456
Q ss_pred CcceeEEEEecCHHH---HHHHHHHhhcCCCCCCCChhHHHHHhcc------CccccCCcccccceeecccCCCc-cCCC
Q 025063 176 YFNAGMFVYEPNLLT---YHDLLETVKVTPPTIFAEQDFLNMYFKD------IYKPIPPTYNLVVAMLWRHLENV-DVDK 245 (258)
Q Consensus 176 ~fNsGvmli~~~~~~---~~~l~~~~~~~~~~~~~DQ~~LN~~~~~------~~~~L~~~yN~~~~~~~~~~~~~-~~~~ 245 (258)
.+|+|=+|++.+.+. ++.+-+-+-........+|+++-.+... .|..||.|+=-... .+.+.| ..+.
T Consensus 248 G~naGSfLirns~~~~~llD~w~dp~l~~~~~~~~Eq~al~~~~e~h~~l~~~vgilp~r~ins~~---~~~~~~g~~eg 324 (364)
T KOG4748|consen 248 GINAGSFLIRNSEWGRLLLDAWNDPLLYELLWGQKEQDALGHFLENHPQLHSHVGILPLRYINSYP---NGAPGYGYEEG 324 (364)
T ss_pred CccccceEEecCccchhHHHhccCHHHHhhccchHHHHHHHHHHhhchhhhhheeeccHHHHhcCC---CCCCCCccccC
Confidence 799999999998843 3333333222223456899999988864 47777776422111 122333 3678
Q ss_pred ceEEEEee
Q 025063 246 VKVVHYCA 253 (258)
Q Consensus 246 ~~IiHy~~ 253 (258)
.-++||+|
T Consensus 325 dlvvhFaG 332 (364)
T KOG4748|consen 325 DLVVHFAG 332 (364)
T ss_pred CeEEEecc
Confidence 89999998
No 34
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=82.40 E-value=0.73 Score=41.06 Aligned_cols=35 Identities=34% Similarity=0.622 Sum_probs=31.6
Q ss_pred hceeeeeccccccccEEEEEecceecccCchhhcC
Q 025063 93 INYSKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFD 127 (258)
Q Consensus 93 ~~~~Kl~l~~l~~ydrvlyLD~D~lv~~~l~~Lf~ 127 (258)
..+.+++.+.+..+++.+.+|+|..++.+.+.+|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~ 185 (369)
T KOG1950|consen 151 LNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFS 185 (369)
T ss_pred hcccccceeeecccccceEEeccchhcCChhhhhh
Confidence 46788999999999999999999999999988888
No 35
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=77.82 E-value=7.4 Score=31.66 Aligned_cols=83 Identities=17% Similarity=0.234 Sum_probs=51.8
Q ss_pred ccccEEEEEecceecccCchhhcCC-CCCceeeeechhcccCCCCCCcccccccccCCCCcCCCCcCCCCCCCCcceeEE
Q 025063 104 VEYEKMIYLDGDIQVFDNIDHLFDA-PDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMGSPPPLYFNAGMF 182 (258)
Q Consensus 104 ~~ydrvlyLD~D~lv~~~l~~Lf~~-~~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~fNsGvm 182 (258)
.+++-||+||+|+-|+.+=.-+-+. +++ + |.... .+.. ..-+.+|-.
T Consensus 40 ~~~~~vlflDaDigVvNp~~~iEefid~~-~----Di~fy------------------------dR~~---n~Ei~agsY 87 (222)
T PF03314_consen 40 PEYDWVLFLDADIGVVNPNRRIEEFIDEG-Y----DIIFY------------------------DRFF---NWEIAAGSY 87 (222)
T ss_pred ccCCEEEEEcCCceeecCcccHHHhcCCC-C----cEEEE------------------------eccc---chhhhhccc
Confidence 5789999999999999653322222 211 1 11000 0110 134668888
Q ss_pred EEecCHHHHHHHHHHhhc---C-CCCCCCChhHHHHHhcc
Q 025063 183 VYEPNLLTYHDLLETVKV---T-PPTIFAEQDFLNMYFKD 218 (258)
Q Consensus 183 li~~~~~~~~~l~~~~~~---~-~~~~~~DQ~~LN~~~~~ 218 (258)
+++.+.+..+-+.+++.- . .++.+.|-++|-.++.+
T Consensus 88 lvkNT~~~~~fl~~~a~~E~~lP~sfhGtDNGAlH~~L~e 127 (222)
T PF03314_consen 88 LVKNTEYSRDFLKEWADYEFKLPNSFHGTDNGALHIFLAE 127 (222)
T ss_pred eeeCCHHHHHHHHHHhhhCccCCCccccCccHHHHHHHHH
Confidence 899998887777776542 2 23567999999888765
No 36
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=77.75 E-value=1.3 Score=31.59 Aligned_cols=19 Identities=32% Similarity=0.524 Sum_probs=16.2
Q ss_pred EEEecceecccCc-hhhcCC
Q 025063 110 IYLDGDIQVFDNI-DHLFDA 128 (258)
Q Consensus 110 lyLD~D~lv~~~l-~~Lf~~ 128 (258)
+|+|.|+++++++ +.+.+.
T Consensus 80 iY~D~D~~~~rpl~~~~~~~ 99 (103)
T PF04488_consen 80 IYLDLDVICLRPLDDPWLPE 99 (103)
T ss_pred EEEeCccccCcchhhhhhcc
Confidence 8999999999999 776543
No 37
>PRK15384 type III secretion system protein; Provisional
Probab=76.50 E-value=3.3 Score=34.28 Aligned_cols=29 Identities=17% Similarity=0.365 Sum_probs=23.1
Q ss_pred cccEEEEEecceecccCchhhcCCCCCceee
Q 025063 105 EYEKMIYLDGDIQVFDNIDHLFDAPDGYFYA 135 (258)
Q Consensus 105 ~ydrvlyLD~D~lv~~~l~~Lf~~~~~~iaa 135 (258)
.-+-+||||+||++.+.+.-|+.-++ ||.
T Consensus 215 ~~~GCIYLDaDMilT~KLG~ly~PDG--Iav 243 (336)
T PRK15384 215 TNSGCIYLDADMIITEKLGGIYIPDG--IAV 243 (336)
T ss_pred CCCceEEeeccceeecccccEEcCCc--eEE
Confidence 35789999999999999988886554 543
No 38
>PRK15383 type III secretion system protein; Provisional
Probab=76.27 E-value=3.5 Score=34.14 Aligned_cols=29 Identities=24% Similarity=0.344 Sum_probs=23.0
Q ss_pred cccEEEEEecceecccCchhhcCCCCCceee
Q 025063 105 EYEKMIYLDGDIQVFDNIDHLFDAPDGYFYA 135 (258)
Q Consensus 105 ~ydrvlyLD~D~lv~~~l~~Lf~~~~~~iaa 135 (258)
.-+-+||||+||++.+.+.-|+.-++ ||.
T Consensus 218 ~~~GCIYLD~DMilT~KLG~ly~PDG--Iav 246 (335)
T PRK15383 218 PGGGCIYLDADMLLTDKLGTLYLPDG--IAI 246 (335)
T ss_pred CCCceEEeecceeeecccccEEcCCc--eEE
Confidence 35779999999999999988886554 543
No 39
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=75.10 E-value=4.4 Score=33.60 Aligned_cols=29 Identities=28% Similarity=0.479 Sum_probs=23.1
Q ss_pred cccEEEEEecceecccCchhhcCCCCCceee
Q 025063 105 EYEKMIYLDGDIQVFDNIDHLFDAPDGYFYA 135 (258)
Q Consensus 105 ~ydrvlyLD~D~lv~~~l~~Lf~~~~~~iaa 135 (258)
.-+-+||||+||++.+.+.-|+.-++ ||.
T Consensus 210 ~~~GCIYLD~DMilT~KLG~ly~PDG--Iav 238 (326)
T PRK15382 210 PCEGCIYLDADMIITDKLGVLYAPDG--IAV 238 (326)
T ss_pred CCCceEEeecceeeecccccEEcCCc--eEE
Confidence 35789999999999999988886554 543
No 40
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=73.60 E-value=12 Score=28.00 Aligned_cols=81 Identities=14% Similarity=0.080 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHhcCC-CCCEEEEECCCCCHHHHHHHHhCCCEEEEecccCCCCchhhhhhhhhhhceeeeecccccccc
Q 025063 29 VKGVVGLAKGLRKAKS-EYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYE 107 (258)
Q Consensus 29 ~~~~~vl~~Sl~~~~~-~~~~~vl~~~~~~~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~yd 107 (258)
...+.-++.||.+... ...+ +++.++-+++..+.+++....+..+ ..+++. .... .+-...+..+.+
T Consensus 9 ~~~l~~~l~sl~~~~~~~~~i-iivdd~s~~~~~~~~~~~~~~~~~~---~~~~~~-g~~~-------a~n~~~~~~~~~ 76 (166)
T cd04186 9 LEYLKACLDSLLAQTYPDFEV-IVVDNASTDGSVELLRELFPEVRLI---RNGENL-GFGA-------GNNQGIREAKGD 76 (166)
T ss_pred HHHHHHHHHHHHhccCCCeEE-EEEECCCCchHHHHHHHhCCCeEEE---ecCCCc-ChHH-------HhhHHHhhCCCC
Confidence 5667788889887643 3344 4466666666666666554322211 111111 1111 111222223789
Q ss_pred EEEEEecceecccC
Q 025063 108 KMIYLDGDIQVFDN 121 (258)
Q Consensus 108 rvlyLD~D~lv~~~ 121 (258)
-++++|+|..+..+
T Consensus 77 ~i~~~D~D~~~~~~ 90 (166)
T cd04186 77 YVLLLNPDTVVEPG 90 (166)
T ss_pred EEEEECCCcEECcc
Confidence 99999999988654
No 41
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=71.71 E-value=34 Score=24.51 Aligned_cols=83 Identities=17% Similarity=0.123 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHhcCC-CCCEEEEECCCCCHHHHHHHHhCCC---EEEEecccCCCCchhhhhhhhhhhceeeeeccccc
Q 025063 29 VKGVVGLAKGLRKAKS-EYPLVVAILPDVPEDHRQILESQGC---IVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFV 104 (258)
Q Consensus 29 ~~~~~vl~~Sl~~~~~-~~~~~vl~~~~~~~~~~~~L~~~~~---~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~ 104 (258)
...+..++.|+.+... ...+++ ++++-+++..+.+++... ....+... .+.. .. ..+-......
T Consensus 9 ~~~l~~~l~s~~~~~~~~~~i~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g-~~-------~~~~~~~~~~ 76 (156)
T cd00761 9 EPYLERCLESLLAQTYPNFEVIV-VDDGSTDGTLEILEEYAKKDPRVIRVINE---ENQG-LA-------AARNAGLKAA 76 (156)
T ss_pred HHHHHHHHHHHHhCCccceEEEE-EeCCCCccHHHHHHHHHhcCCCeEEEEec---CCCC-hH-------HHHHHHHHHh
Confidence 5667788888888763 344444 555555555555544322 11111111 1100 00 0111111122
Q ss_pred cccEEEEEecceecccCch
Q 025063 105 EYEKMIYLDGDIQVFDNID 123 (258)
Q Consensus 105 ~ydrvlyLD~D~lv~~~l~ 123 (258)
+.|.++++|+|.++..+.-
T Consensus 77 ~~d~v~~~d~D~~~~~~~~ 95 (156)
T cd00761 77 RGEYILFLDADDLLLPDWL 95 (156)
T ss_pred cCCEEEEECCCCccCccHH
Confidence 6899999999999876533
No 42
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=71.67 E-value=9.5 Score=30.96 Aligned_cols=87 Identities=14% Similarity=0.059 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHhcCC---CCCEEEEECCCCCHHHHHHHHhCCCEEEEecccCCCCchhhhhhhhhhhceeeeeccccccc
Q 025063 30 KGVVGLAKGLRKAKS---EYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEY 106 (258)
Q Consensus 30 ~~~~vl~~Sl~~~~~---~~~~~vl~~~~~~~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~y 106 (258)
..+.-++.|+.+... ++.++| ++++-+++..+.++........+..+..+.. ..... +-...+..+.
T Consensus 13 ~~l~~~l~sl~~q~~~~~~~eviv-vd~~s~d~~~~~~~~~~~~~~~v~~i~~~~~--~~~~a-------~N~g~~~a~~ 82 (249)
T cd02525 13 KYIEELLESLLNQSYPKDLIEIIV-VDGGSTDGTREIVQEYAAKDPRIRLIDNPKR--IQSAG-------LNIGIRNSRG 82 (249)
T ss_pred hhHHHHHHHHHhccCCCCccEEEE-EeCCCCccHHHHHHHHHhcCCeEEEEeCCCC--CchHH-------HHHHHHHhCC
Confidence 456677888876543 334443 5666566555666554321111111111111 01110 1111122267
Q ss_pred cEEEEEecceecccC-chhhc
Q 025063 107 EKMIYLDGDIQVFDN-IDHLF 126 (258)
Q Consensus 107 drvlyLD~D~lv~~~-l~~Lf 126 (258)
|-++++|+|.++..+ +..+.
T Consensus 83 d~v~~lD~D~~~~~~~l~~~~ 103 (249)
T cd02525 83 DIIIRVDAHAVYPKDYILELV 103 (249)
T ss_pred CEEEEECCCccCCHHHHHHHH
Confidence 899999999988644 45554
No 43
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=70.26 E-value=13 Score=30.53 Aligned_cols=87 Identities=11% Similarity=0.112 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhcC-CC--CCEEEEECCCCCHHHHHHHHhCCCE-EEEecccCCCCchhhhhhhhhhhceeeeecccccc
Q 025063 30 KGVVGLAKGLRKAK-SE--YPLVVAILPDVPEDHRQILESQGCI-VREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVE 105 (258)
Q Consensus 30 ~~~~vl~~Sl~~~~-~~--~~~~vl~~~~~~~~~~~~L~~~~~~-i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~ 105 (258)
..+..++.|+.... ++ ..+ ++++++-++...+.+++.... +..+ ..+.+.. ... .+-...+...
T Consensus 42 ~~l~~~l~si~~q~~~~~~~ei-ivvdd~s~d~t~~~~~~~~~~~v~~i---~~~~~~g-~~~-------a~n~gi~~a~ 109 (251)
T cd06439 42 AVIEAKLENLLALDYPRDRLEI-IVVSDGSTDGTAEIAREYADKGVKLL---RFPERRG-KAA-------ALNRALALAT 109 (251)
T ss_pred HHHHHHHHHHHhCcCCCCcEEE-EEEECCCCccHHHHHHHHhhCcEEEE---EcCCCCC-hHH-------HHHHHHHHcC
Confidence 55677788887643 33 233 345666666666666655321 1111 1111111 110 1111111223
Q ss_pred ccEEEEEecceecccC-chhhcCC
Q 025063 106 YEKMIYLDGDIQVFDN-IDHLFDA 128 (258)
Q Consensus 106 ydrvlyLD~D~lv~~~-l~~Lf~~ 128 (258)
.|-|+++|+|+++..+ +..+.+.
T Consensus 110 ~d~i~~lD~D~~~~~~~l~~l~~~ 133 (251)
T cd06439 110 GEIVVFTDANALLDPDALRLLVRH 133 (251)
T ss_pred CCEEEEEccccCcCHHHHHHHHHH
Confidence 4889999999999855 5555544
No 44
>PF01793 Glyco_transf_15: Glycolipid 2-alpha-mannosyltransferase; InterPro: IPR002685 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This entry represents a family of fungi mannosyl-transferases involved in N-linked and O-linked glycosylation of proteins. They belong to the glycosyltransferase family 15 (GT15 from CAZY). Some of the enzymes in this family have been shown to be involved in O- and N-linked glycan modifications in the Golgi [].; GO: 0000030 mannosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 1S4P_A 1S4O_A 1S4N_A.
Probab=69.56 E-value=19 Score=31.52 Aligned_cols=116 Identities=17% Similarity=0.242 Sum_probs=53.0
Q ss_pred CCCCCeEEEEEeecCCccHHHHHHHHHHHHh-cCC--CCCEEEEECCCCCHHHHHHHHhC-C--CEEEEecc--cCCCCc
Q 025063 11 MNVPKRAYVTFLAGNGDYVKGVVGLAKGLRK-AKS--EYPLVVAILPDVPEDHRQILESQ-G--CIVREIEP--VYPPEN 82 (258)
Q Consensus 11 ~~~~~~a~vt~l~~d~~y~~~~~vl~~Sl~~-~~~--~~~~~vl~~~~~~~~~~~~L~~~-~--~~i~~v~~--~~~~~~ 82 (258)
.++.+-|+|+ |+.|. =+.+++..++||-. .|. .||.+.|-...++++.++.+++. . +....|.. ...|+.
T Consensus 52 ~~r~~Aafv~-LvrN~-dL~~~l~SI~~lE~rFN~kf~YpwvFlnd~pFteeFk~~i~~~~~~~v~F~~Ip~e~W~~P~~ 129 (328)
T PF01793_consen 52 YPRENAAFVM-LVRNS-DLEGLLSSIRSLEDRFNKKFNYPWVFLNDEPFTEEFKEAISNATSGKVEFGLIPKEHWSYPDW 129 (328)
T ss_dssp HS---EEEEE-E--GG-GHHHHHHHHHHHHHHTTTTS---EEEEESS---HHHHHHHHHH-SS-EEEEE--GGGSS--TT
T ss_pred CCCCceEEEE-EEEch-hHHHHHHHHHHHHHHccCCCCCCEEEEeCCCCCHHHHHHHHHhhcCceEEEEeCHHHcCCCCc
Confidence 4678899998 55554 58899999999964 355 47888777778999998888653 2 22223322 222221
Q ss_pred h--hhhhhh----------h-hhhc---eeee------eccccccccEEEEEecceecccCch-hhcCC
Q 025063 83 Q--TEFAMA----------Y-YVIN---YSKL------RIWEFVEYEKMIYLDGDIQVFDNID-HLFDA 128 (258)
Q Consensus 83 ~--~~~~~~----------~-~~~~---~~Kl------~l~~l~~ydrvlyLD~D~lv~~~l~-~Lf~~ 128 (258)
. ...... + .... ..|+ ..+.|.+||=.-=+++|+-+.-||+ ++|..
T Consensus 130 ID~~~a~~~~~~~~~~~v~yg~s~sYr~McRf~SG~F~~hp~l~~ydyyWRvEP~v~~~Cdi~YD~F~~ 198 (328)
T PF01793_consen 130 IDQEKAAESREKMAEEGVPYGDSESYRHMCRFYSGFFYRHPLLQDYDYYWRVEPDVKFYCDIDYDPFRF 198 (328)
T ss_dssp S-HHHHHHHHHHHTT-TSTTTT-HHHHHHHHHHHHTGGGSGGGTT-SEEEE--TT-EE-S---S-HHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHhhhcChhhcCccEEEEeCCCceeecCCCCCHHHH
Confidence 1 111100 0 0011 1221 1233458999999999999999887 66643
No 45
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=68.76 E-value=23 Score=31.64 Aligned_cols=22 Identities=18% Similarity=0.268 Sum_probs=17.0
Q ss_pred ccEEEEEecceecccC-chhhcC
Q 025063 106 YEKMIYLDGDIQVFDN-IDHLFD 127 (258)
Q Consensus 106 ydrvlyLD~D~lv~~~-l~~Lf~ 127 (258)
.|-++++|+|+.+-.+ +..+.+
T Consensus 134 gd~llflDaD~~~~p~~l~~lv~ 156 (384)
T TIGR03469 134 ADYLLLTDADIAHGPDNLARLVA 156 (384)
T ss_pred CCEEEEECCCCCCChhHHHHHHH
Confidence 7999999999998644 455543
No 46
>PRK11204 N-glycosyltransferase; Provisional
Probab=68.76 E-value=16 Score=32.85 Aligned_cols=98 Identities=18% Similarity=0.129 Sum_probs=48.8
Q ss_pred CeEEEEEeecCCccHHHHHHHHHHHHhc-CCCCCEEEEECCCCCHHHHHHHHhC---CCEEEEecccCCCCchhhhhhhh
Q 025063 15 KRAYVTFLAGNGDYVKGVVGLAKGLRKA-KSEYPLVVAILPDVPEDHRQILESQ---GCIVREIEPVYPPENQTEFAMAY 90 (258)
Q Consensus 15 ~~a~vt~l~~d~~y~~~~~vl~~Sl~~~-~~~~~~~vl~~~~~~~~~~~~L~~~---~~~i~~v~~~~~~~~~~~~~~~~ 90 (258)
+.+++. -+-|+. ..+..++.|+.+. .++++++| ++++-+++..+.+++. ..++..+. ..++.. .....
T Consensus 55 ~vsViI-p~yne~--~~i~~~l~sl~~q~yp~~eiiV-vdD~s~d~t~~~l~~~~~~~~~v~~i~---~~~n~G-ka~al 126 (420)
T PRK11204 55 GVSILV-PCYNEG--ENVEETISHLLALRYPNYEVIA-INDGSSDNTGEILDRLAAQIPRLRVIH---LAENQG-KANAL 126 (420)
T ss_pred CEEEEE-ecCCCH--HHHHHHHHHHHhCCCCCeEEEE-EECCCCccHHHHHHHHHHhCCcEEEEE---cCCCCC-HHHHH
Confidence 455543 233443 4566778888764 34445444 6666666655555433 22222222 111111 11110
Q ss_pred hhhceeeeeccccccccEEEEEecceecccC-chhhcC
Q 025063 91 YVINYSKLRIWEFVEYEKMIYLDGDIQVFDN-IDHLFD 127 (258)
Q Consensus 91 ~~~~~~Kl~l~~l~~ydrvlyLD~D~lv~~~-l~~Lf~ 127 (258)
. ...+..++|-++.+|+|.++-.+ +.++.+
T Consensus 127 n-------~g~~~a~~d~i~~lDaD~~~~~d~L~~l~~ 157 (420)
T PRK11204 127 N-------TGAAAARSEYLVCIDGDALLDPDAAAYMVE 157 (420)
T ss_pred H-------HHHHHcCCCEEEEECCCCCCChhHHHHHHH
Confidence 0 00112367999999999998765 445443
No 47
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=64.23 E-value=32 Score=30.27 Aligned_cols=99 Identities=16% Similarity=0.235 Sum_probs=49.2
Q ss_pred ccHHHHHHHHHHHHhcCC---CCCEEEEECCCCCHHHHHHHHhCCCEEEEecccCCCC-chh---hhhhhhhhhc---ee
Q 025063 27 DYVKGVVGLAKGLRKAKS---EYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPE-NQT---EFAMAYYVIN---YS 96 (258)
Q Consensus 27 ~y~~~~~vl~~Sl~~~~~---~~~~~vl~~~~~~~~~~~~L~~~~~~i~~v~~~~~~~-~~~---~~~~~~~~~~---~~ 96 (258)
|....+.-++.||++..| ..+++| ..|+-.++..+.++..+..+..+...+... +.. .+......+. +.
T Consensus 10 NRp~~l~r~LesLl~~~p~~~~~~liI-s~DG~~~~~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~ia~hyk~a 88 (334)
T cd02514 10 NRPDYLRRMLDSLLSYRPSAEKFPIIV-SQDGGYEEVADVAKSFGDGVTHIQHPPISIKNVNPPHKFQGYYRIARHYKWA 88 (334)
T ss_pred CCHHHHHHHHHHHHhccccCCCceEEE-EeCCCchHHHHHHHhhccccEEEEcccccccccCcccccchhhHHHHHHHHH
Confidence 556677888889887642 234544 456655655666666532222222211110 000 0000000000 11
Q ss_pred eeeccccccccEEEEEecceecccCchhhc
Q 025063 97 KLRIWEFVEYEKMIYLDGDIQVFDNIDHLF 126 (258)
Q Consensus 97 Kl~l~~l~~ydrvlyLD~D~lv~~~l~~Lf 126 (258)
.=.+++...+++||.||.|+++-.+.=+.|
T Consensus 89 ln~vF~~~~~~~vIILEDDl~~sPdFf~yf 118 (334)
T cd02514 89 LTQTFNLFGYSFVIILEDDLDIAPDFFSYF 118 (334)
T ss_pred HHHHHHhcCCCEEEEECCCCccCHhHHHHH
Confidence 112222336999999999999987744333
No 48
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=63.88 E-value=38 Score=27.19 Aligned_cols=94 Identities=16% Similarity=0.077 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEecccCCCCchhhhhhhhhhhceeeeeccccccc
Q 025063 29 VKGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQ--GCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEY 106 (258)
Q Consensus 29 ~~~~~vl~~Sl~~~~~~~~~~vl~~~~~~~~~~~~L~~~--~~~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~y 106 (258)
...+..++.|+.+.. ...++| +.++-+++..+.|+.. ...+..+. .. +.. .... .-...+....
T Consensus 13 ~~~l~~~l~sl~~q~-~~eiiv-vdd~s~d~~~~~l~~~~~~~~~~v~~---~~-~~g-~~~a-------~n~g~~~a~~ 78 (235)
T cd06434 13 PDVFRECLRSILRQK-PLEIIV-VTDGDDEPYLSILSQTVKYGGIFVIT---VP-HPG-KRRA-------LAEGIRHVTT 78 (235)
T ss_pred hHHHHHHHHHHHhCC-CCEEEE-EeCCCChHHHHHHHhhccCCcEEEEe---cC-CCC-hHHH-------HHHHHHHhCC
Confidence 356677788888765 455544 5666666666665322 11111111 11 100 0110 0011112368
Q ss_pred cEEEEEecceecccC-chhhcCC-CCCceeee
Q 025063 107 EKMIYLDGDIQVFDN-IDHLFDA-PDGYFYAV 136 (258)
Q Consensus 107 drvlyLD~D~lv~~~-l~~Lf~~-~~~~iaa~ 136 (258)
|-|+++|+|+.+..+ +..+.+. ....++++
T Consensus 79 d~v~~lD~D~~~~~~~l~~l~~~~~~~~v~~v 110 (235)
T cd06434 79 DIVVLLDSDTVWPPNALPEMLKPFEDPKVGGV 110 (235)
T ss_pred CEEEEECCCceeChhHHHHHHHhccCCCEeEE
Confidence 999999999999976 6666544 22234444
No 49
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=63.47 E-value=26 Score=25.98 Aligned_cols=87 Identities=18% Similarity=0.156 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCEE-EEecccCCCCchhhhhhhhhhhceeeeecccccccc
Q 025063 30 KGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQGCIV-REIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYE 107 (258)
Q Consensus 30 ~~~~vl~~Sl~~~~-~~~~~~vl~~~~~~~~~~~~L~~~~~~i-~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~yd 107 (258)
..+..++.||++.. +...++| +.++-+++..+.+++..... ..+..+...++. ..... +-...+....+
T Consensus 10 ~~l~~~l~sl~~q~~~~~~iiv-vdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~-------~n~~~~~~~~~ 80 (180)
T cd06423 10 AVIERTIESLLALDYPKLEVIV-VDDGSTDDTLEILEELAALYIRRVLVVRDKENG-GKAGA-------LNAGLRHAKGD 80 (180)
T ss_pred HHHHHHHHHHHhCCCCceEEEE-EeCCCccchHHHHHHHhccccceEEEEEecccC-CchHH-------HHHHHHhcCCC
Confidence 56777788888765 3445444 56666666555555543210 000111111111 01111 11111222678
Q ss_pred EEEEEecceecccC-chhh
Q 025063 108 KMIYLDGDIQVFDN-IDHL 125 (258)
Q Consensus 108 rvlyLD~D~lv~~~-l~~L 125 (258)
-|+++|+|.++..+ +.++
T Consensus 81 ~i~~~D~D~~~~~~~l~~~ 99 (180)
T cd06423 81 IVVVLDADTILEPDALKRL 99 (180)
T ss_pred EEEEECCCCCcChHHHHHH
Confidence 99999999999866 5555
No 50
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=61.52 E-value=31 Score=30.23 Aligned_cols=195 Identities=13% Similarity=0.167 Sum_probs=83.2
Q ss_pred CeEEEEEeecCCccHHHHHHHHHHHHhc-CCCCCE-EEEECCCCCHHHHHHHHhC-CCEEEEecccCCCCchhhhhhhhh
Q 025063 15 KRAYVTFLAGNGDYVKGVVGLAKGLRKA-KSEYPL-VVAILPDVPEDHRQILESQ-GCIVREIEPVYPPENQTEFAMAYY 91 (258)
Q Consensus 15 ~~a~vt~l~~d~~y~~~~~vl~~Sl~~~-~~~~~~-~vl~~~~~~~~~~~~L~~~-~~~i~~v~~~~~~~~~~~~~~~~~ 91 (258)
+.+.+. +|+ ..|...+.-.+.|-.++ -+.+++ +.+.+|+...--.-.|... ...+..|.. .. +|.
T Consensus 100 tIGL~v-fA~-GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~p~~vP~i~l~~~r~~~V~~v~~------~~----~Wq 167 (337)
T PF03414_consen 100 TIGLTV-FAT-GKYIVFLKDFLESAEKHFMVGHRVIYYVFTDQPSKVPRIELGPGRRLKVFEVQE------EK----RWQ 167 (337)
T ss_dssp EEEEEE-EE--CCHHHHHHHHHHHHHHHBSTTSEEEEEEEES-GGGS------TTEEEEEEE-SG------GS----SHH
T ss_pred eEEEEE-Eec-ccHHHHHHHHHHhHHHhccCCcEEEEEEEeCchhhCCccccCCCceeEEEEecc------cC----CCc
Confidence 344443 443 69999888899998776 344443 2334544221000111111 011222211 01 122
Q ss_pred hhceeeeeccc-------cccccEEEEEecceecccCch-hhcCCCCCceeeeechhcccCCCCCCcccccccccCCCCc
Q 025063 92 VINYSKLRIWE-------FVEYEKMIYLDGDIQVFDNID-HLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKV 163 (258)
Q Consensus 92 ~~~~~Kl~l~~-------l~~ydrvlyLD~D~lv~~~l~-~Lf~~~~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (258)
..+..|+.+.. +.++|=+..+|+|+++.+++. |.+ +..+|.....+-. .....+-++....+ ..
T Consensus 168 d~sm~Rm~~i~~~i~~~~~~EvDYLFc~dvd~~F~~~vGvE~L---g~lva~LHp~~y~---~~~~~FpYERrp~S--~A 239 (337)
T PF03414_consen 168 DISMMRMEMISEHIEQHIQHEVDYLFCMDVDMVFQDHVGVEIL---GDLVATLHPWFYF---KPRESFPYERRPKS--QA 239 (337)
T ss_dssp HHHHHHHHHHHHHHHHCHHHH-SEEEEEESSEEE-S-B-GGG----SSEEEEESTTTTT---STGGGS--B-STTS--TT
T ss_pred cchhHHHHHHHHHHHHHHhhcCCEEEEEecceEEecccCHHHH---HHHHHHhCHHHHC---CChhhCccccCccc--cc
Confidence 23344443332 236899999999999998876 333 1223333321100 00000111111000 01
Q ss_pred CCCCcCCCCCCCCcceeEEEEecCH------HHHHHHHHHhhcCCCCCCCChhHHHHHhc-c-CccccCCcccccce
Q 025063 164 QWPVEMGSPPPLYFNAGMFVYEPNL------LTYHDLLETVKVTPPTIFAEQDFLNMYFK-D-IYKPIPPTYNLVVA 232 (258)
Q Consensus 164 ~~p~~~g~~~~~~fNsGvmli~~~~------~~~~~l~~~~~~~~~~~~~DQ~~LN~~~~-~-~~~~L~~~yN~~~~ 232 (258)
-.|... .+-|+-+|+.-=.+.. .-.+.+++-.+++-...+.|..-||.+|- . -.+.|++.|++...
T Consensus 240 yIp~~e---GDfYY~ga~fGGt~~~vl~Lt~~c~~~i~~D~~n~I~A~WhDESHLNKYfl~~KPtKvLSPEY~Wd~~ 313 (337)
T PF03414_consen 240 YIPYGE---GDFYYHGAFFGGTVEEVLRLTEACHQGIMQDKANGIEALWHDESHLNKYFLYHKPTKVLSPEYCWDER 313 (337)
T ss_dssp B--TT-----S--EECCEEEECHHHHHHHHHHHHHHHHHHHHTT---TTCHHHHHHHHHHHS--SEEE-GGGSBSHH
T ss_pred cccCCC---CCeEEeceecCCcHHHHHHHHHHHHHHHHhhhhcCceEeccchhhhHHHHhhCCCceecCHHHccCcc
Confidence 112122 2467777777533332 11222222233322356899999999885 3 37899999998654
No 51
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=61.22 E-value=36 Score=27.80 Aligned_cols=85 Identities=12% Similarity=0.088 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhcC-CC--CCEEEEECCCCCHHHHHHHHhCCC----EEEEecccCCCCchhhhhhhhhhhceeeeeccc
Q 025063 30 KGVVGLAKGLRKAK-SE--YPLVVAILPDVPEDHRQILESQGC----IVREIEPVYPPENQTEFAMAYYVINYSKLRIWE 102 (258)
Q Consensus 30 ~~~~vl~~Sl~~~~-~~--~~~~vl~~~~~~~~~~~~L~~~~~----~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~ 102 (258)
..+.-++.|+.+.. +. ..+ +++.++-+++..+.+++... +++.+.. ..+. ...... . ...+
T Consensus 14 ~~l~~~l~sl~~~~y~~~~~ei-ivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~---~~~~-G~~~a~-----n--~g~~ 81 (241)
T cd06427 14 EVLPQLIASLSALDYPRSKLDV-KLLLEEDDEETIAAARALRLPSIFRVVVVPP---SQPR-TKPKAC-----N--YALA 81 (241)
T ss_pred HHHHHHHHHHHhCcCCcccEEE-EEEECCCCchHHHHHHHhccCCCeeEEEecC---CCCC-chHHHH-----H--HHHH
Confidence 56677888887643 22 233 33556667777777776532 2222211 1111 011110 0 1112
Q ss_pred cccccEEEEEecceecccC-chhhc
Q 025063 103 FVEYEKMIYLDGDIQVFDN-IDHLF 126 (258)
Q Consensus 103 l~~ydrvlyLD~D~lv~~~-l~~Lf 126 (258)
....|=|+++|+|+.+-.+ +.++.
T Consensus 82 ~a~gd~i~~~DaD~~~~~~~l~~~~ 106 (241)
T cd06427 82 FARGEYVVIYDAEDAPDPDQLKKAV 106 (241)
T ss_pred hcCCCEEEEEcCCCCCChHHHHHHH
Confidence 2356889999999998754 44443
No 52
>KOG4472 consensus Glycolipid 2-alpha-mannosyltransferase (alpha-1,2-mannosyltransferase) [Carbohydrate transport and metabolism]
Probab=60.67 E-value=31 Score=30.70 Aligned_cols=59 Identities=19% Similarity=0.296 Sum_probs=43.6
Q ss_pred cCCCCCCCCeEEEEEeecCCccHHHHHHHHHHHHh-cCC--CCCEEEEECCCCCHHHHHHHHhC
Q 025063 7 TEPIMNVPKRAYVTFLAGNGDYVKGVVGLAKGLRK-AKS--EYPLVVAILPDVPEDHRQILESQ 67 (258)
Q Consensus 7 ~~~~~~~~~~a~vt~l~~d~~y~~~~~vl~~Sl~~-~~~--~~~~~vl~~~~~~~~~~~~L~~~ 67 (258)
-+|.-++.+.++|+ |+.|.+ +.+++..++|+-. .|. .||-+.|-++..+++.++.....
T Consensus 74 ~~~~~~r~natfv~-L~RN~d-L~~vl~Si~svE~rFNk~f~YpwvFLNdepFteeFk~~~~~~ 135 (399)
T KOG4472|consen 74 EAPSYPRENATFVM-LARNSD-LEDVLSSIRSVEDRFNKNFHYPWVFLNDEPFTEEFKEATSDI 135 (399)
T ss_pred cCCCCCCcccEEEE-EEechh-HHHHHHHHHHHHHHhhccCCCCeEEecCchhHHHHHHHHHHH
Confidence 34556678889998 667777 9999999999964 344 47876666666888888776653
No 53
>COG5020 KTR1 Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=60.67 E-value=31 Score=30.70 Aligned_cols=59 Identities=19% Similarity=0.296 Sum_probs=43.6
Q ss_pred cCCCCCCCCeEEEEEeecCCccHHHHHHHHHHHHh-cCC--CCCEEEEECCCCCHHHHHHHHhC
Q 025063 7 TEPIMNVPKRAYVTFLAGNGDYVKGVVGLAKGLRK-AKS--EYPLVVAILPDVPEDHRQILESQ 67 (258)
Q Consensus 7 ~~~~~~~~~~a~vt~l~~d~~y~~~~~vl~~Sl~~-~~~--~~~~~vl~~~~~~~~~~~~L~~~ 67 (258)
-+|.-++.+.++|+ |+.|.+ +.+++..++|+-. .|. .||-+.|-++..+++.++.....
T Consensus 74 ~~~~~~r~natfv~-L~RN~d-L~~vl~Si~svE~rFNk~f~YpwvFLNdepFteeFk~~~~~~ 135 (399)
T COG5020 74 EAPSYPRENATFVM-LARNSD-LEDVLSSIRSVEDRFNKNFHYPWVFLNDEPFTEEFKEATSDI 135 (399)
T ss_pred cCCCCCCcccEEEE-EEechh-HHHHHHHHHHHHHHhhccCCCCeEEecCchhHHHHHHHHHHH
Confidence 34556678889998 667777 9999999999964 344 47876666666888888776653
No 54
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=60.40 E-value=8.1 Score=28.77 Aligned_cols=87 Identities=21% Similarity=0.331 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhc-CCCCCEEEEECCCCCHHHHHHHHhC---CCEEEEecccCCCCchhhhhhhhhhhceeeeecccccc
Q 025063 30 KGVVGLAKGLRKA-KSEYPLVVAILPDVPEDHRQILESQ---GCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVE 105 (258)
Q Consensus 30 ~~~~vl~~Sl~~~-~~~~~~~vl~~~~~~~~~~~~L~~~---~~~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~ 105 (258)
..+.-++.||++. .....+ ++++++-+++..+.+++. +..+.-+.. +++. .+.. .+-...+...
T Consensus 11 ~~l~~~l~sl~~q~~~~~ei-ivvdd~s~d~~~~~~~~~~~~~~~i~~i~~---~~n~-g~~~-------~~n~~~~~a~ 78 (169)
T PF00535_consen 11 EYLERTLESLLKQTDPDFEI-IVVDDGSTDETEEILEEYAESDPNIRYIRN---PENL-GFSA-------ARNRGIKHAK 78 (169)
T ss_dssp TTHHHHHHHHHHHSGCEEEE-EEEECS-SSSHHHHHHHHHCCSTTEEEEEH---CCCS-HHHH-------HHHHHHHH--
T ss_pred HHHHHHHHHHhhccCCCEEE-EEeccccccccccccccccccccccccccc---cccc-cccc-------cccccccccc
Confidence 3444566777665 233334 335566566666667664 222222211 1121 1111 1222333445
Q ss_pred ccEEEEEecceecccC-chhhcCC
Q 025063 106 YEKMIYLDGDIQVFDN-IDHLFDA 128 (258)
Q Consensus 106 ydrvlyLD~D~lv~~~-l~~Lf~~ 128 (258)
.+-++++|+|.++..+ +..+.+.
T Consensus 79 ~~~i~~ld~D~~~~~~~l~~l~~~ 102 (169)
T PF00535_consen 79 GEYILFLDDDDIISPDWLEELVEA 102 (169)
T ss_dssp SSEEEEEETTEEE-TTHHHHHHHH
T ss_pred eeEEEEeCCCceEcHHHHHHHHHH
Confidence 6799999999999987 7777765
No 55
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=58.94 E-value=37 Score=26.89 Aligned_cols=82 Identities=13% Similarity=0.159 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCEEEEecccCCCCchhhhhhhhhhhceeeeecccccccc
Q 025063 29 VKGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYE 107 (258)
Q Consensus 29 ~~~~~vl~~Sl~~~~-~~~~~~vl~~~~~~~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~yd 107 (258)
-..+..++.||.... ++..+ ++++++-+++..+.+++.+..+.. .+.. ..... -........+
T Consensus 11 ~~~l~~~l~sl~~q~~~~~ev-ivvdd~s~d~~~~~~~~~~~~~~~-----~~~g---~~~a~-------n~g~~~a~~~ 74 (221)
T cd02522 11 AENLPRLLASLRRLNPLPLEI-IVVDGGSTDGTVAIARSAGVVVIS-----SPKG---RARQM-------NAGAAAARGD 74 (221)
T ss_pred HHHHHHHHHHHHhccCCCcEE-EEEeCCCCccHHHHHhcCCeEEEe-----CCcC---HHHHH-------HHHHHhccCC
Confidence 345677788887654 33444 445666666666666663332221 1111 11110 0111222368
Q ss_pred EEEEEecceecccC-chhhc
Q 025063 108 KMIYLDGDIQVFDN-IDHLF 126 (258)
Q Consensus 108 rvlyLD~D~lv~~~-l~~Lf 126 (258)
-|+++|+|..+..+ +..|.
T Consensus 75 ~i~~~D~D~~~~~~~l~~l~ 94 (221)
T cd02522 75 WLLFLHADTRLPPDWDAAII 94 (221)
T ss_pred EEEEEcCCCCCChhHHHHHH
Confidence 99999999998754 44443
No 56
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=58.75 E-value=29 Score=27.23 Aligned_cols=90 Identities=17% Similarity=0.144 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCEEEEecccCCCCchhhhhhhhhhhceeeeeccccccccE
Q 025063 30 KGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYEK 108 (258)
Q Consensus 30 ~~~~vl~~Sl~~~~-~~~~~~vl~~~~~~~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~ydr 108 (258)
..+.-++.||.+.. +...+ ++++++-++...+.+++.+.... +..+..+++.. ...... ..+ +... ..++|-
T Consensus 10 ~~l~~~l~sl~~q~~~~~ei-iivD~~s~d~t~~~~~~~~~~~~-i~~~~~~~n~g-~~~~~n-~~~-~~a~--~~~~d~ 82 (202)
T cd04185 10 DLLKECLDALLAQTRPPDHI-IVIDNASTDGTAEWLTSLGDLDN-IVYLRLPENLG-GAGGFY-EGV-RRAY--ELGYDW 82 (202)
T ss_pred HHHHHHHHHHHhccCCCceE-EEEECCCCcchHHHHHHhcCCCc-eEEEECccccc-hhhHHH-HHH-HHHh--ccCCCE
Confidence 45677788887653 33444 44666666666777776543210 11222222211 111000 000 1111 236899
Q ss_pred EEEEecceecccC-chhhc
Q 025063 109 MIYLDGDIQVFDN-IDHLF 126 (258)
Q Consensus 109 vlyLD~D~lv~~~-l~~Lf 126 (258)
++++|+|.++..+ ++++.
T Consensus 83 v~~ld~D~~~~~~~l~~l~ 101 (202)
T cd04185 83 IWLMDDDAIPDPDALEKLL 101 (202)
T ss_pred EEEeCCCCCcChHHHHHHH
Confidence 9999999999754 34443
No 57
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=58.62 E-value=34 Score=26.38 Aligned_cols=86 Identities=6% Similarity=0.007 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCEEEEecccCCCCchhhhhhhhhhhceeeeecccccccc
Q 025063 29 VKGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYE 107 (258)
Q Consensus 29 ~~~~~vl~~Sl~~~~-~~~~~~vl~~~~~~~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~yd 107 (258)
...+..++.||.+.. ++..+ ++++++-+++..+.+++....++.+.. ..+. ..... +-...+....|
T Consensus 10 ~~~l~~~l~sl~~q~~~~~ev-ivvDd~s~d~~~~~~~~~~~~~~~~~~---~~~~-g~~~a-------~n~~~~~a~~~ 77 (202)
T cd06433 10 AETLEETIDSVLSQTYPNIEY-IVIDGGSTDGTVDIIKKYEDKITYWIS---EPDK-GIYDA-------MNKGIALATGD 77 (202)
T ss_pred HHHHHHHHHHHHhCCCCCceE-EEEeCCCCccHHHHHHHhHhhcEEEEe---cCCc-CHHHH-------HHHHHHHcCCC
Confidence 356677788887653 33343 345666566666666665432221211 1111 11111 11111223568
Q ss_pred EEEEEecceecccC-chhhc
Q 025063 108 KMIYLDGDIQVFDN-IDHLF 126 (258)
Q Consensus 108 rvlyLD~D~lv~~~-l~~Lf 126 (258)
-|+++|+|..+..+ +..+.
T Consensus 78 ~v~~ld~D~~~~~~~~~~~~ 97 (202)
T cd06433 78 IIGFLNSDDTLLPGALLAVV 97 (202)
T ss_pred EEEEeCCCcccCchHHHHHH
Confidence 89999999998755 66654
No 58
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=58.30 E-value=47 Score=26.76 Aligned_cols=18 Identities=17% Similarity=0.117 Sum_probs=15.3
Q ss_pred ccccEEEEEecceecccC
Q 025063 104 VEYEKMIYLDGDIQVFDN 121 (258)
Q Consensus 104 ~~ydrvlyLD~D~lv~~~ 121 (258)
.++|=|+++|+|+++-.+
T Consensus 86 a~~~~i~~~DaD~~~~~~ 103 (232)
T cd06437 86 AKGEYVAIFDADFVPPPD 103 (232)
T ss_pred CCCCEEEEEcCCCCCChH
Confidence 368999999999998754
No 59
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=56.52 E-value=54 Score=26.18 Aligned_cols=88 Identities=10% Similarity=0.035 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhcC-CC--CCEEEEECCCCCHHHHHHHHhCCCEEEEecccCCCCchhhhhhhhhhhceeeeecccccccc
Q 025063 31 GVVGLAKGLRKAK-SE--YPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYE 107 (258)
Q Consensus 31 ~~~vl~~Sl~~~~-~~--~~~~vl~~~~~~~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~yd 107 (258)
.+..++.|++... +. +.+ ++++++-+++..+.+++.+... .+..+..+.+. ..+.. . .-...+....|
T Consensus 16 ~l~~~l~sl~~q~~~~~~~ei-ivvdd~s~d~t~~~~~~~~~~~-~~~~~~~~~~~-~~~~~----~--~n~~~~~a~~d 86 (234)
T cd06421 16 IVRKTLRAALAIDYPHDKLRV-YVLDDGRRPELRALAAELGVEY-GYRYLTRPDNR-HAKAG----N--LNNALAHTTGD 86 (234)
T ss_pred HHHHHHHHHHhcCCCcccEEE-EEEcCCCchhHHHHHHHhhccc-CceEEEeCCCC-CCcHH----H--HHHHHHhCCCC
Confidence 4567788887643 33 344 4466676677677777665421 01111111110 00000 0 00111223689
Q ss_pred EEEEEecceecccC-chhhcC
Q 025063 108 KMIYLDGDIQVFDN-IDHLFD 127 (258)
Q Consensus 108 rvlyLD~D~lv~~~-l~~Lf~ 127 (258)
-++++|+|+++-.+ +..+..
T Consensus 87 ~i~~lD~D~~~~~~~l~~l~~ 107 (234)
T cd06421 87 FVAILDADHVPTPDFLRRTLG 107 (234)
T ss_pred EEEEEccccCcCccHHHHHHH
Confidence 99999999999754 334433
No 60
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=54.38 E-value=17 Score=30.77 Aligned_cols=23 Identities=26% Similarity=0.468 Sum_probs=18.3
Q ss_pred cccEEEEEecceecccC-chhhcC
Q 025063 105 EYEKMIYLDGDIQVFDN-IDHLFD 127 (258)
Q Consensus 105 ~ydrvlyLD~D~lv~~~-l~~Lf~ 127 (258)
..|-|+++|+|+++-.+ +..+..
T Consensus 88 ~~d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 88 RGDYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred CCCEEEEEcCCeeeCHHHHHHHHH
Confidence 67999999999999754 555555
No 61
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=53.72 E-value=50 Score=30.14 Aligned_cols=104 Identities=19% Similarity=0.307 Sum_probs=46.4
Q ss_pred eecCCccHHHHHHHHHHHHhcC---CCCCEEEEECCCCCHHHHHHHHhCCCEEEEecc-----cCCCCchhhhhhhhhhh
Q 025063 22 LAGNGDYVKGVVGLAKGLRKAK---SEYPLVVAILPDVPEDHRQILESQGCIVREIEP-----VYPPENQTEFAMAYYVI 93 (258)
Q Consensus 22 l~~d~~y~~~~~vl~~Sl~~~~---~~~~~~vl~~~~~~~~~~~~L~~~~~~i~~v~~-----~~~~~~~~~~~~~~~~~ 93 (258)
+++ +-..++.-++.||+++. ..+|++| ..++-.++..+.+++++..+..+.. +..+.....+...+-.+
T Consensus 100 ~Ac--NRp~yl~r~L~sLl~~rp~~~~fpIiV-SQDg~~~~~~~vi~~y~~~v~~i~~~~~~~i~~~~~~~~~~~y~~IA 176 (434)
T PF03071_consen 100 FAC--NRPDYLRRTLDSLLKYRPSAEKFPIIV-SQDGDDEEVAEVIKSYGDQVTYIQHPDFSPITIPPKEKKFKGYYKIA 176 (434)
T ss_dssp EES--S-TT-HHHHHHHHHHH-S-TTTS-EEE-EE-TT-HHHHHHHHGGGGGSEEEE-S--S-----TT-GGGHHHHHHH
T ss_pred Eec--CCcHHHHHHHHHHHHcCCCCCCccEEE-EecCCcHHHHHHHHHhhhhheeeecCCcCCceeCcccccccchHHHH
Confidence 555 33444556667776643 3456655 4455566667777777543322322 11111111111100011
Q ss_pred ceeeee---ccccccccEEEEEecceecccCchhhcCC
Q 025063 94 NYSKLR---IWEFVEYEKMIYLDGDIQVFDNIDHLFDA 128 (258)
Q Consensus 94 ~~~Kl~---l~~l~~ydrvlyLD~D~lv~~~l~~Lf~~ 128 (258)
.-+|.. ++....|++||.|.-|+.+-.|.=+.|..
T Consensus 177 ~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~ 214 (434)
T PF03071_consen 177 RHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSA 214 (434)
T ss_dssp HHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHH
Confidence 112222 22223699999999999998777666643
No 62
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=53.48 E-value=69 Score=25.94 Aligned_cols=81 Identities=12% Similarity=0.207 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCEEEEecccCCCCchhhhhhhhhhhceeeeeccccccccEE
Q 025063 30 KGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYEKM 109 (258)
Q Consensus 30 ~~~~vl~~Sl~~~~~~~~~~vl~~~~~~~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~ydrv 109 (258)
..+..++.||..... .+ ++++++-++.+.+.+++.+.+++.. .. .. +... |=+..+....|-|
T Consensus 13 ~~l~~~l~sl~~~~~--ei-ivvD~gStD~t~~i~~~~~~~v~~~---~~-~g---~~~~-------~n~~~~~a~~d~v 75 (229)
T cd02511 13 RNIERCLESVKWAVD--EI-IVVDSGSTDRTVEIAKEYGAKVYQR---WW-DG---FGAQ-------RNFALELATNDWV 75 (229)
T ss_pred HHHHHHHHHHhcccC--EE-EEEeCCCCccHHHHHHHcCCEEEEC---CC-CC---hHHH-------HHHHHHhCCCCEE
Confidence 456677788865421 34 4477777777777788777776543 11 11 1111 1111122346799
Q ss_pred EEEecceecccC-chhhcC
Q 025063 110 IYLDGDIQVFDN-IDHLFD 127 (258)
Q Consensus 110 lyLD~D~lv~~~-l~~Lf~ 127 (258)
+++|+|.++..+ +.++.+
T Consensus 76 l~lDaD~~~~~~~~~~l~~ 94 (229)
T cd02511 76 LSLDADERLTPELADEILA 94 (229)
T ss_pred EEEeCCcCcCHHHHHHHHH
Confidence 999999998765 444443
No 63
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=52.18 E-value=43 Score=28.46 Aligned_cols=88 Identities=8% Similarity=0.008 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHhcCCCC-C-EEEEECCCCCHHHHHHHHh-----CCCEEEEecccCCCCchhhhhhhhhhhceeeeeccc
Q 025063 30 KGVVGLAKGLRKAKSEY-P-LVVAILPDVPEDHRQILES-----QGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWE 102 (258)
Q Consensus 30 ~~~~vl~~Sl~~~~~~~-~-~~vl~~~~~~~~~~~~L~~-----~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~ 102 (258)
..+..++.||....+.. . =+|+++++-++.+.+.+.+ ....+.- +..+.+. .+...+. ....
T Consensus 12 ~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~v---i~~~~n~-G~~~a~N-------~g~~ 80 (299)
T cd02510 12 STLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKV---LRLKKRE-GLIRARI-------AGAR 80 (299)
T ss_pred HHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEE---EEcCCCC-CHHHHHH-------HHHH
Confidence 67778889998765432 1 2344666665555554422 1112221 1111111 1211110 1111
Q ss_pred cccccEEEEEecceecccC-chhhcCC
Q 025063 103 FVEYEKMIYLDGDIQVFDN-IDHLFDA 128 (258)
Q Consensus 103 l~~ydrvlyLD~D~lv~~~-l~~Lf~~ 128 (258)
....|=|++||+|+.+..+ |..|.+.
T Consensus 81 ~A~gd~i~fLD~D~~~~~~wL~~ll~~ 107 (299)
T cd02510 81 AATGDVLVFLDSHCEVNVGWLEPLLAR 107 (299)
T ss_pred HccCCEEEEEeCCcccCccHHHHHHHH
Confidence 2346899999999999644 6666553
No 64
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=51.18 E-value=39 Score=29.30 Aligned_cols=103 Identities=16% Similarity=0.088 Sum_probs=60.5
Q ss_pred CCCCCeEEEEEeecCCccHH-HHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhC-----------CCEEEEecccC
Q 025063 11 MNVPKRAYVTFLAGNGDYVK-GVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQ-----------GCIVREIEPVY 78 (258)
Q Consensus 11 ~~~~~~a~vt~l~~d~~y~~-~~~vl~~Sl~~~~~~~~~~vl~~~~~~~~~~~~L~~~-----------~~~i~~v~~~~ 78 (258)
|.+-+++.+|.+-++.+.+. +..+.-.|. ....++++ +|+.+.. .|+.. .++++.|+.+.
T Consensus 60 m~~c~vvV~saIFG~yD~l~qP~~i~~~s~----~~vcf~mF-~D~~t~~---~l~~~~~~~~~~~~ig~WrIv~v~~lp 131 (305)
T PF04765_consen 60 MEKCRVVVYSAIFGNYDKLRQPKNISEYSK----KNVCFFMF-VDEETLK---SLESEGHIPDENKKIGIWRIVVVKNLP 131 (305)
T ss_pred HhcCCEEEEEEecCCCccccCchhhCHHHh----cCccEEEE-EehhhHH---HHHhcCCccccccccCceEEEEecCCC
Confidence 55666788887766666553 222221222 24555554 4554433 23321 24566665442
Q ss_pred CCCchhhhhhhhhhhceeeeecccc-ccccEEEEEecceecccCchhhcCC
Q 025063 79 PPENQTEFAMAYYVINYSKLRIWEF-VEYEKMIYLDGDIQVFDNIDHLFDA 128 (258)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~Kl~l~~l-~~ydrvlyLD~D~lv~~~l~~Lf~~ 128 (258)
..+ ++-...+.|+..-.+ .+|+--||+|+-+-++.|+..|.+-
T Consensus 132 ~~d-------~rr~~r~~K~lpHrlfp~y~ySIWID~ki~L~~Dp~~lie~ 175 (305)
T PF04765_consen 132 YDD-------PRRNGRIPKLLPHRLFPNYDYSIWIDGKIQLIVDPLLLIER 175 (305)
T ss_pred Ccc-------hhhcCcccceeccccCCCCceEEEEeeeEEEecCHHHHHHH
Confidence 111 111235678888886 5899999999999999998877654
No 65
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=48.51 E-value=51 Score=25.66 Aligned_cols=18 Identities=17% Similarity=0.257 Sum_probs=14.6
Q ss_pred ccccEEEEEecceecccC
Q 025063 104 VEYEKMIYLDGDIQVFDN 121 (258)
Q Consensus 104 ~~ydrvlyLD~D~lv~~~ 121 (258)
.+.|=++++|+|.++..+
T Consensus 79 a~gd~i~~lD~Dd~~~~~ 96 (201)
T cd04195 79 CTYDWVARMDTDDISLPD 96 (201)
T ss_pred cCCCEEEEeCCccccCcH
Confidence 357889999999988754
No 66
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=47.74 E-value=1.4e+02 Score=26.49 Aligned_cols=22 Identities=18% Similarity=0.336 Sum_probs=17.0
Q ss_pred ccccEEEEEecceecccC-chhh
Q 025063 104 VEYEKMIYLDGDIQVFDN-IDHL 125 (258)
Q Consensus 104 ~~ydrvlyLD~D~lv~~~-l~~L 125 (258)
.++|-++++|+|+.+-.+ +..+
T Consensus 125 a~ge~i~~~DaD~~~~p~~L~~l 147 (373)
T TIGR03472 125 ARHDILVIADSDISVGPDYLRQV 147 (373)
T ss_pred ccCCEEEEECCCCCcChhHHHHH
Confidence 468999999999999654 4444
No 67
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=47.60 E-value=88 Score=23.50 Aligned_cols=42 Identities=7% Similarity=0.071 Sum_probs=27.4
Q ss_pred CccHHHHHHHHHHHHhcCCC-CCEEEEECCCCCHHHHHHHHhCC
Q 025063 26 GDYVKGVVGLAKGLRKAKSE-YPLVVAILPDVPEDHRQILESQG 68 (258)
Q Consensus 26 ~~y~~~~~vl~~Sl~~~~~~-~~~~vl~~~~~~~~~~~~L~~~~ 68 (258)
-|.-..+..++.|+.+.... .. +++++++-++...+.++...
T Consensus 12 ~n~~~~l~~~l~s~~~q~~~~~e-iivvddgs~d~t~~~~~~~~ 54 (291)
T COG0463 12 YNEEEYLPEALESLLNQTYKDFE-IIVVDDGSTDGTTEIAIEYG 54 (291)
T ss_pred cchhhhHHHHHHHHHhhhhcceE-EEEEeCCCCCChHHHHHHHh
Confidence 34447788888999876533 34 55577777776666666554
No 68
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=47.22 E-value=1.3e+02 Score=23.12 Aligned_cols=89 Identities=17% Similarity=0.243 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHhcCC---CCCEEEEECCCCCHHHHHHHHhCCCEEEEecccCCCCch-hhhhhhhhhhceeeeecccccc
Q 025063 30 KGVVGLAKGLRKAKS---EYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQ-TEFAMAYYVINYSKLRIWEFVE 105 (258)
Q Consensus 30 ~~~~vl~~Sl~~~~~---~~~~~vl~~~~~~~~~~~~L~~~~~~i~~v~~~~~~~~~-~~~~~~~~~~~~~Kl~l~~l~~ 105 (258)
..+..++.|+.+... .+.++ ++.++-++++.+.++..+..+..... +.+. +..+.. ....+.+- .-..
T Consensus 10 ~~i~~~l~sl~~~~~p~~~~eii-vvdd~s~D~t~~~~~~~~~~~~~~~~---~~~~gk~~aln-~g~~~a~~---~~~~ 81 (183)
T cd06438 10 AVIGNTVRSLKAQDYPRELYRIF-VVADNCTDDTAQVARAAGATVLERHD---PERRGKGYALD-FGFRHLLN---LADD 81 (183)
T ss_pred HHHHHHHHHHHhcCCCCcccEEE-EEeCCCCchHHHHHHHcCCeEEEeCC---CCCCCHHHHHH-HHHHHHHh---cCCC
Confidence 455667788876432 23343 35667677777777777665432211 1111 111100 00000000 0125
Q ss_pred ccEEEEEecceecccC-chhhc
Q 025063 106 YEKMIYLDGDIQVFDN-IDHLF 126 (258)
Q Consensus 106 ydrvlyLD~D~lv~~~-l~~Lf 126 (258)
+|-|+++|+|+.+-.+ +..+.
T Consensus 82 ~d~v~~~DaD~~~~p~~l~~l~ 103 (183)
T cd06438 82 PDAVVVFDADNLVDPNALEELN 103 (183)
T ss_pred CCEEEEEcCCCCCChhHHHHHH
Confidence 8899999999999744 34443
No 69
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=45.65 E-value=44 Score=27.35 Aligned_cols=23 Identities=9% Similarity=0.241 Sum_probs=16.7
Q ss_pred cccEEEEEecceeccc-CchhhcC
Q 025063 105 EYEKMIYLDGDIQVFD-NIDHLFD 127 (258)
Q Consensus 105 ~ydrvlyLD~D~lv~~-~l~~Lf~ 127 (258)
..|-++++|+|..+.. .+.++++
T Consensus 93 ~g~~i~~lD~D~~~~~~~l~~l~~ 116 (243)
T PLN02726 93 SGDFVVIMDADLSHHPKYLPSFIK 116 (243)
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHH
Confidence 5689999999998653 3555554
No 70
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=45.38 E-value=60 Score=29.55 Aligned_cols=96 Identities=18% Similarity=0.143 Sum_probs=46.5
Q ss_pred CeEEEEEeecCCccHHHHHHHHHHHHhc-CCCCCEEEEECCCCCHHHHHHHHhC---CCEEEEecccCCCCchhhhhhhh
Q 025063 15 KRAYVTFLAGNGDYVKGVVGLAKGLRKA-KSEYPLVVAILPDVPEDHRQILESQ---GCIVREIEPVYPPENQTEFAMAY 90 (258)
Q Consensus 15 ~~a~vt~l~~d~~y~~~~~vl~~Sl~~~-~~~~~~~vl~~~~~~~~~~~~L~~~---~~~i~~v~~~~~~~~~~~~~~~~ 90 (258)
+.+++. -+-|+. ..+..++.|+.+. .+++++++ ++++-+++..+.+++. ...+.-+. ... +.. .+...
T Consensus 76 ~vsViI-P~yNE~--~~i~~~l~sll~q~yp~~eIiv-VdDgs~D~t~~~~~~~~~~~~~v~vv~-~~~--n~G-ka~Al 147 (444)
T PRK14583 76 LVSILV-PCFNEG--LNARETIHAALAQTYTNIEVIA-INDGSSDDTAQVLDALLAEDPRLRVIH-LAH--NQG-KAIAL 147 (444)
T ss_pred cEEEEE-EeCCCH--HHHHHHHHHHHcCCCCCeEEEE-EECCCCccHHHHHHHHHHhCCCEEEEE-eCC--CCC-HHHHH
Confidence 344442 223444 4456777888764 34555444 6666666555544432 12222111 111 111 11110
Q ss_pred hhhceeeeeccccccccEEEEEecceecccC-chhh
Q 025063 91 YVINYSKLRIWEFVEYEKMIYLDGDIQVFDN-IDHL 125 (258)
Q Consensus 91 ~~~~~~Kl~l~~l~~ydrvlyLD~D~lv~~~-l~~L 125 (258)
.. . ....++|-++.+|+|.+.-.+ +..+
T Consensus 148 N~-g------l~~a~~d~iv~lDAD~~~~~d~L~~l 176 (444)
T PRK14583 148 RM-G------AAAARSEYLVCIDGDALLDKNAVPYL 176 (444)
T ss_pred HH-H------HHhCCCCEEEEECCCCCcCHHHHHHH
Confidence 00 0 012367999999999998765 3444
No 71
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=44.34 E-value=40 Score=26.73 Aligned_cols=24 Identities=17% Similarity=0.147 Sum_probs=17.9
Q ss_pred ccccEEEEEecceecccC-chhhcC
Q 025063 104 VEYEKMIYLDGDIQVFDN-IDHLFD 127 (258)
Q Consensus 104 ~~ydrvlyLD~D~lv~~~-l~~Lf~ 127 (258)
...|-|+++|+|.++..+ +..+..
T Consensus 81 ~~~d~i~~~D~D~~~~~~~l~~l~~ 105 (229)
T cd04192 81 AKGDWIVTTDADCVVPSNWLLTFVA 105 (229)
T ss_pred hcCCEEEEECCCcccCHHHHHHHHH
Confidence 357999999999988754 445544
No 72
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=43.80 E-value=18 Score=28.83 Aligned_cols=22 Identities=18% Similarity=0.365 Sum_probs=15.9
Q ss_pred ccEEEEEecceecccC-chhhcC
Q 025063 106 YEKMIYLDGDIQVFDN-IDHLFD 127 (258)
Q Consensus 106 ydrvlyLD~D~lv~~~-l~~Lf~ 127 (258)
-|-|+++|+|..+..+ +..+.+
T Consensus 79 gd~i~~lD~D~~~~~~~l~~l~~ 101 (224)
T cd06442 79 GDVIVVMDADLSHPPEYIPELLE 101 (224)
T ss_pred CCEEEEEECCCCCCHHHHHHHHH
Confidence 4789999999887643 445544
No 73
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=43.07 E-value=15 Score=28.22 Aligned_cols=90 Identities=12% Similarity=0.165 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHhcCC---CCCEEEEECCCCCHHHHHHHHhCCCEEEEecccCCCCchhhhhhhhhhhceeeeeccccccc
Q 025063 30 KGVVGLAKGLRKAKS---EYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEY 106 (258)
Q Consensus 30 ~~~~vl~~Sl~~~~~---~~~~~vl~~~~~~~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~y 106 (258)
..+.-++.|+.+... .+.+ +++.++-+++..+.++........+..+...++.. ... .+-...+...-
T Consensus 10 ~~l~~~l~sl~~~~~~~~~~ei-ivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~G-~~~-------a~n~g~~~a~g 80 (185)
T cd04179 10 ENIPELVERLLAVLEEGYDYEI-IVVDDGSTDGTAEIARELAARVPRVRVIRLSRNFG-KGA-------AVRAGFKAARG 80 (185)
T ss_pred hhHHHHHHHHHHHhccCCCEEE-EEEcCCCCCChHHHHHHHHHhCCCeEEEEccCCCC-ccH-------HHHHHHHHhcC
Confidence 455677788876542 3343 33555555555555554432211111121111110 111 11111122223
Q ss_pred cEEEEEecceecccC-chhhcCC
Q 025063 107 EKMIYLDGDIQVFDN-IDHLFDA 128 (258)
Q Consensus 107 drvlyLD~D~lv~~~-l~~Lf~~ 128 (258)
|=+++||+|..+..+ ++.+...
T Consensus 81 d~i~~lD~D~~~~~~~l~~l~~~ 103 (185)
T cd04179 81 DIVVTMDADLQHPPEDIPKLLEK 103 (185)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHH
Confidence 789999999988755 6667663
No 74
>PRK10073 putative glycosyl transferase; Provisional
Probab=43.06 E-value=64 Score=28.10 Aligned_cols=85 Identities=13% Similarity=0.131 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhC---CCEEEEecccCCCCchhhhhhhhhhhceeeeecccccc
Q 025063 30 KGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQ---GCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVE 105 (258)
Q Consensus 30 ~~~~vl~~Sl~~~~-~~~~~~vl~~~~~~~~~~~~L~~~---~~~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~ 105 (258)
..+.-++.||.... ++..+ ++++++-++...+.+++. ...+.-+.. ++. ..+..+ =...+...
T Consensus 19 ~~L~~~l~Sl~~Qt~~~~EI-IiVdDgStD~t~~i~~~~~~~~~~i~vi~~----~n~-G~~~ar-------N~gl~~a~ 85 (328)
T PRK10073 19 KDFRAFMESLIAQTWTALEI-IIVNDGSTDNSVEIAKHYAENYPHVRLLHQ----ANA-GVSVAR-------NTGLAVAT 85 (328)
T ss_pred HHHHHHHHHHHhCCCCCeEE-EEEeCCCCccHHHHHHHHHhhCCCEEEEEC----CCC-ChHHHH-------HHHHHhCC
Confidence 55667788987654 33444 446777666665555543 222222211 121 111111 11112234
Q ss_pred ccEEEEEecceecccC-chhhcC
Q 025063 106 YEKMIYLDGDIQVFDN-IDHLFD 127 (258)
Q Consensus 106 ydrvlyLD~D~lv~~~-l~~Lf~ 127 (258)
-+=|+++|+|-.+..+ +..+.+
T Consensus 86 g~yi~flD~DD~~~p~~l~~l~~ 108 (328)
T PRK10073 86 GKYVAFPDADDVVYPTMYETLMT 108 (328)
T ss_pred CCEEEEECCCCccChhHHHHHHH
Confidence 5789999999998765 444443
No 75
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=42.57 E-value=1.1e+02 Score=24.37 Aligned_cols=25 Identities=16% Similarity=0.198 Sum_probs=17.8
Q ss_pred ccccccEEEEEecceecccC-chhhc
Q 025063 102 EFVEYEKMIYLDGDIQVFDN-IDHLF 126 (258)
Q Consensus 102 ~l~~ydrvlyLD~D~lv~~~-l~~Lf 126 (258)
+....|-+++||+|.++..+ +..++
T Consensus 81 ~~a~gd~i~~lD~D~~~~~~~l~~~~ 106 (219)
T cd06913 81 AQSSGRYLCFLDSDDVMMPQRIRLQY 106 (219)
T ss_pred HhcCCCEEEEECCCccCChhHHHHHH
Confidence 34467999999999987654 44443
No 76
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=39.32 E-value=1.8e+02 Score=25.26 Aligned_cols=15 Identities=33% Similarity=0.324 Sum_probs=12.8
Q ss_pred cccEEEEEecceecc
Q 025063 105 EYEKMIYLDGDIQVF 119 (258)
Q Consensus 105 ~ydrvlyLD~D~lv~ 119 (258)
..|-|+++|+|...-
T Consensus 90 ~gd~vv~~DaD~q~~ 104 (325)
T PRK10714 90 TGDLIITLDADLQNP 104 (325)
T ss_pred CCCEEEEECCCCCCC
Confidence 579999999999864
No 77
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=38.87 E-value=62 Score=24.62 Aligned_cols=86 Identities=13% Similarity=0.208 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCC----CEEEEecccCCCCchhhhhhhhhhhceeeeeccccc
Q 025063 30 KGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQG----CIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFV 104 (258)
Q Consensus 30 ~~~~vl~~Sl~~~~-~~~~~~vl~~~~~~~~~~~~L~~~~----~~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~ 104 (258)
..+..++.||.+.. +...++| ++++-++...+.+++.. ..++.+. ..+.. +... ..+=...+..
T Consensus 10 ~~l~~~l~sl~~q~~~~~eiiv-vdd~s~d~t~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~-----~~~n~g~~~a 78 (182)
T cd06420 10 EALELVLKSVLNQSILPFEVII-ADDGSTEETKELIEEFKSQFPIPIKHVW--QEDEG---FRKA-----KIRNKAIAAA 78 (182)
T ss_pred HHHHHHHHHHHhccCCCCEEEE-EeCCCchhHHHHHHHHHhhcCCceEEEE--cCCcc---hhHH-----HHHHHHHHHh
Confidence 45667788887654 3444444 56665555555555432 2222221 11111 1110 0011111234
Q ss_pred cccEEEEEecceecccC-chhhc
Q 025063 105 EYEKMIYLDGDIQVFDN-IDHLF 126 (258)
Q Consensus 105 ~ydrvlyLD~D~lv~~~-l~~Lf 126 (258)
..+-+++||+|.++..+ +..+.
T Consensus 79 ~g~~i~~lD~D~~~~~~~l~~~~ 101 (182)
T cd06420 79 KGDYLIFIDGDCIPHPDFIADHI 101 (182)
T ss_pred cCCEEEEEcCCcccCHHHHHHHH
Confidence 57899999999988654 44443
No 78
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=38.28 E-value=2.5e+02 Score=26.60 Aligned_cols=45 Identities=18% Similarity=0.251 Sum_probs=30.4
Q ss_pred CCCCCCCCeEEEEEeecCCc---cHHHHHHHHHHHHhcCC--CCCEEEEEC
Q 025063 8 EPIMNVPKRAYVTFLAGNGD---YVKGVVGLAKGLRKAKS--EYPLVVAIL 53 (258)
Q Consensus 8 ~~~~~~~~~a~vt~l~~d~~---y~~~~~vl~~Sl~~~~~--~~~~~vl~~ 53 (258)
+|+++-.+-|++.=+| |++ -+.++.++-.||.+.+. ..|++|+-+
T Consensus 138 ~p~p~~hrTAilmPiy-nEd~~rVfAgLrA~~eSla~Tg~~~~FD~FVLSD 187 (736)
T COG2943 138 EPLPDLHRTAILMPIY-NEDVNRVFAGLRATYESLAATGHAEHFDFFVLSD 187 (736)
T ss_pred CCCCcccceeEEeecc-ccCHHHHHHHHHHHHHHHHhhCCcccceEEEEcC
Confidence 5667777877775343 443 45688899999998765 457777543
No 79
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=37.70 E-value=83 Score=24.55 Aligned_cols=90 Identities=11% Similarity=0.073 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCEE-EEecccCCCCchhhhhhhhhhhceeeeecccccccc
Q 025063 30 KGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQGCIV-REIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYE 107 (258)
Q Consensus 30 ~~~~vl~~Sl~~~~-~~~~~~vl~~~~~~~~~~~~L~~~~~~i-~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~yd 107 (258)
..+..++.||++.. ++..++| ++++-+++..+.+++..... ..+..+....+. .....+ .+ .......|
T Consensus 11 ~~l~~~l~sl~~q~~~~~eiiV-vddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~-----n~--g~~~~~g~ 81 (214)
T cd04196 11 KYLREQLDSILAQTYKNDELII-SDDGSTDGTVEIIKEYIDKDPFIIILIRNGKNL-GVARNF-----ES--LLQAADGD 81 (214)
T ss_pred HHHHHHHHHHHhCcCCCeEEEE-EeCCCCCCcHHHHHHHHhcCCceEEEEeCCCCc-cHHHHH-----HH--HHHhCCCC
Confidence 45667788887653 3344433 56665555555555432210 011111111111 111110 01 12234678
Q ss_pred EEEEEecceecccC-chhhcCC
Q 025063 108 KMIYLDGDIQVFDN-IDHLFDA 128 (258)
Q Consensus 108 rvlyLD~D~lv~~~-l~~Lf~~ 128 (258)
-|++||+|.++..+ +..+.+.
T Consensus 82 ~v~~ld~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 82 YVFFCDQDDIWLPDKLERLLKA 103 (214)
T ss_pred EEEEECCCcccChhHHHHHHHH
Confidence 99999999888765 7777664
No 80
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=37.46 E-value=78 Score=28.82 Aligned_cols=99 Identities=10% Similarity=0.055 Sum_probs=48.3
Q ss_pred CCeEEEEEeecCCccHHHHHHHHHHHHhcC-CCCCE-EEEECCCCCHHHHHHHHh---CCCEEEEecccCCCCchhhhhh
Q 025063 14 PKRAYVTFLAGNGDYVKGVVGLAKGLRKAK-SEYPL-VVAILPDVPEDHRQILES---QGCIVREIEPVYPPENQTEFAM 88 (258)
Q Consensus 14 ~~~a~vt~l~~d~~y~~~~~vl~~Sl~~~~-~~~~~-~vl~~~~~~~~~~~~L~~---~~~~i~~v~~~~~~~~~~~~~~ 88 (258)
++.+++. -+-|+. ..+..++.|+.+.. +...+ +++++++-++++.+.+++ ....+. +..++... ..+.
T Consensus 49 P~vsVII-P~yNe~--~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~-v~~~~~~~---Gka~ 121 (439)
T TIGR03111 49 PDITIII-PVYNSE--DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLS-LRYMNSDQ---GKAK 121 (439)
T ss_pred CCEEEEE-EeCCCh--HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeE-EEEeCCCC---CHHH
Confidence 4555553 223443 66777888887654 33223 445677777776655543 222221 11112111 1111
Q ss_pred hhhhhceeeeeccccccccEEEEEecceecccC-chhhc
Q 025063 89 AYYVINYSKLRIWEFVEYEKMIYLDGDIQVFDN-IDHLF 126 (258)
Q Consensus 89 ~~~~~~~~Kl~l~~l~~ydrvlyLD~D~lv~~~-l~~Lf 126 (258)
... .. .+....|=|+.+|+|.++-.+ +.++.
T Consensus 122 AlN-~g------l~~s~g~~v~~~DaD~~~~~d~L~~l~ 153 (439)
T TIGR03111 122 ALN-AA------IYNSIGKYIIHIDSDGKLHKDAIKNMV 153 (439)
T ss_pred HHH-HH------HHHccCCEEEEECCCCCcChHHHHHHH
Confidence 100 00 011234569999999999654 44443
No 81
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=36.46 E-value=1.4e+02 Score=23.34 Aligned_cols=35 Identities=14% Similarity=0.179 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHH
Q 025063 30 KGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILE 65 (258)
Q Consensus 30 ~~~~vl~~Sl~~~~~~~~~~vl~~~~~~~~~~~~L~ 65 (258)
..+..++.||.+..++..+ ++++++-++...+.++
T Consensus 10 ~~l~~~l~sl~~~~~~~eI-ivvdd~S~D~t~~~~~ 44 (191)
T cd06436 10 AVIQRTLASLLRNKPNFLV-LVIDDASDDDTAGIVR 44 (191)
T ss_pred HHHHHHHHHHHhCCCCeEE-EEEECCCCcCHHHHHh
Confidence 4566778888875544444 4466666666666665
No 82
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=36.10 E-value=83 Score=24.39 Aligned_cols=22 Identities=18% Similarity=0.141 Sum_probs=16.4
Q ss_pred cccEEEEEecceecccC-chhhc
Q 025063 105 EYEKMIYLDGDIQVFDN-IDHLF 126 (258)
Q Consensus 105 ~ydrvlyLD~D~lv~~~-l~~Lf 126 (258)
..|=++++|+|..+..+ +..+.
T Consensus 83 ~~d~i~~ld~D~~~~~~~l~~~~ 105 (202)
T cd04184 83 TGEFVALLDHDDELAPHALYEVV 105 (202)
T ss_pred cCCEEEEECCCCcCChHHHHHHH
Confidence 46899999999988654 44443
No 83
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=35.58 E-value=2.6e+02 Score=23.33 Aligned_cols=25 Identities=20% Similarity=0.482 Sum_probs=20.2
Q ss_pred ccccEEEEEecceecc-cCchhhcCCC
Q 025063 104 VEYEKMIYLDGDIQVF-DNIDHLFDAP 129 (258)
Q Consensus 104 ~~ydrvlyLD~D~lv~-~~l~~Lf~~~ 129 (258)
..++|||||+ |+++. .|+-+|+...
T Consensus 111 ~~fd~VlfLN-DV~f~~~Dil~LL~~~ 136 (241)
T PF11735_consen 111 RRFDKVLFLN-DVFFCPEDILELLFTR 136 (241)
T ss_pred CCcCEEEEec-CcccCHHHHHHHHhhc
Confidence 4699999999 87665 7888888774
No 84
>PRK10063 putative glycosyl transferase; Provisional
Probab=33.90 E-value=1.4e+02 Score=24.71 Aligned_cols=81 Identities=16% Similarity=0.219 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHhc----CCCCCEEEEECCCCCHHHHHHHHhCCC--EEEEecccCCCCchhhhhhhhhhhceeeeeccc
Q 025063 29 VKGVVGLAKGLRKA----KSEYPLVVAILPDVPEDHRQILESQGC--IVREIEPVYPPENQTEFAMAYYVINYSKLRIWE 102 (258)
Q Consensus 29 ~~~~~vl~~Sl~~~----~~~~~~~vl~~~~~~~~~~~~L~~~~~--~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~ 102 (258)
...+..++.||... ..+..+ ++++++-++.+.+.+++... .+.-+. .+.. .+..... + ...
T Consensus 13 ~~~l~~~l~sl~~~~~~~~~~~Ei-IVvDdgStD~t~~i~~~~~~~~~i~~i~---~~~~--G~~~A~N-----~--Gi~ 79 (248)
T PRK10063 13 LEGIVKTHASLRHLAQDPGISFEW-IVVDGGSNDGTREFLENLNGIFNLRFVS---EPDN--GIYDAMN-----K--GIA 79 (248)
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEE-EEEECcCcccHHHHHHHhcccCCEEEEE---CCCC--CHHHHHH-----H--HHH
Confidence 44455666666532 223333 44666677777777776532 122121 1111 1211110 0 001
Q ss_pred cccccEEEEEecceecccCc
Q 025063 103 FVEYEKMIYLDGDIQVFDNI 122 (258)
Q Consensus 103 l~~ydrvlyLD~D~lv~~~l 122 (258)
....|-|++||+|.++..+.
T Consensus 80 ~a~g~~v~~ld~DD~~~~~~ 99 (248)
T PRK10063 80 MAQGRFALFLNSGDIFHQDA 99 (248)
T ss_pred HcCCCEEEEEeCCcccCcCH
Confidence 12468999999999888764
No 85
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=33.56 E-value=1.1e+02 Score=20.86 Aligned_cols=67 Identities=13% Similarity=0.124 Sum_probs=33.5
Q ss_pred CEEEEECCCCCHHHHHHHHhC-CCEEEEecccCCCCchhhhhhhhhhhceeeeeccccccccEEEEEecceecccC
Q 025063 47 PLVVAILPDVPEDHRQILESQ-GCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYEKMIYLDGDIQVFDN 121 (258)
Q Consensus 47 ~~~vl~~~~~~~~~~~~L~~~-~~~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~ydrvlyLD~D~lv~~~ 121 (258)
+-++++.++-++...+.|++. ++.++... .+... .... ..+.+..+-...+.+=|+++|+|=++.-+
T Consensus 20 d~i~i~d~~s~D~t~~~l~~~~~v~i~~~~--~~~~~-~~~~-----~~~~~~~~~~~~~~dWvl~~D~DEfl~~~ 87 (97)
T PF13704_consen 20 DHIYIYDDGSTDGTREILRALPGVGIIRWV--DPYRD-ERRQ-----RAWRNALIERAFDADWVLFLDADEFLVPP 87 (97)
T ss_pred CEEEEEECCCCccHHHHHHhCCCcEEEEeC--CCccc-hHHH-----HHHHHHHHHhCCCCCEEEEEeeeEEEecC
Confidence 434446777777777888775 33333221 11111 0000 11111122222367999999999777643
No 86
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=27.99 E-value=3.5e+02 Score=23.27 Aligned_cols=90 Identities=13% Similarity=0.082 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHhcCC---CCCEEEEECCCCCHHHHHHHHhCCCEEEEe-cccCC-CCchhhhhhhhhhhceeeeecccc
Q 025063 29 VKGVVGLAKGLRKAKS---EYPLVVAILPDVPEDHRQILESQGCIVREI-EPVYP-PENQTEFAMAYYVINYSKLRIWEF 103 (258)
Q Consensus 29 ~~~~~vl~~Sl~~~~~---~~~~~vl~~~~~~~~~~~~L~~~~~~i~~v-~~~~~-~~~~~~~~~~~~~~~~~Kl~l~~l 103 (258)
-..+..++.|+.+... ...+ ++++++-++.+.+.+++.+.+++.. ..+.. +.+. ...... .+ ....
T Consensus 43 e~~I~~~l~sl~~~~~~~~~~EI-IVVDDgStD~T~~ia~~~~~~v~~~~~~~~~~~~n~-Gkg~A~-----~~--g~~~ 113 (306)
T PRK13915 43 EETVGKVVDSIRPLLMEPLVDEL-IVIDSGSTDATAERAAAAGARVVSREEILPELPPRP-GKGEAL-----WR--SLAA 113 (306)
T ss_pred HHHHHHHHHHHHHHhccCCCcEE-EEEeCCCccHHHHHHHHhcchhhcchhhhhccccCC-CHHHHH-----HH--HHHh
Confidence 3445566777765422 2233 4477777777777787776553321 11100 1110 011110 00 1122
Q ss_pred ccccEEEEEeccee-cc-cCchhhcC
Q 025063 104 VEYEKMIYLDGDIQ-VF-DNIDHLFD 127 (258)
Q Consensus 104 ~~ydrvlyLD~D~l-v~-~~l~~Lf~ 127 (258)
...|-|+++|+|.. .- +.+..|.+
T Consensus 114 a~gd~vv~lDaD~~~~~p~~l~~l~~ 139 (306)
T PRK13915 114 TTGDIVVFVDADLINFDPMFVPGLLG 139 (306)
T ss_pred cCCCEEEEEeCccccCCHHHHHHHHH
Confidence 35789999999997 42 33555543
No 87
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=27.21 E-value=2.5e+02 Score=22.35 Aligned_cols=22 Identities=14% Similarity=0.265 Sum_probs=17.9
Q ss_pred cccEEEEEecceecccC-chhhc
Q 025063 105 EYEKMIYLDGDIQVFDN-IDHLF 126 (258)
Q Consensus 105 ~ydrvlyLD~D~lv~~~-l~~Lf 126 (258)
++|-|+++|+|+.+-.+ +.++.
T Consensus 75 ~~d~v~~lD~D~~~~~~~l~~l~ 97 (237)
T cd02526 75 GADYVLLFDQDSVPPPDMVEKLL 97 (237)
T ss_pred CCCEEEEECCCCCcCHhHHHHHH
Confidence 58999999999999754 66663
No 88
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=27.21 E-value=3.9e+02 Score=22.75 Aligned_cols=44 Identities=14% Similarity=0.070 Sum_probs=27.2
Q ss_pred CCCCCeEEEEEeecCCccHHHHHHHHHHHHhcCCCC--CEEEEECCCCC
Q 025063 11 MNVPKRAYVTFLAGNGDYVKGVVGLAKGLRKAKSEY--PLVVAILPDVP 57 (258)
Q Consensus 11 ~~~~~~a~vt~l~~d~~y~~~~~vl~~Sl~~~~~~~--~~~vl~~~~~~ 57 (258)
-.++++.++|-|--...|++.-.-++.|| ..|.. .+-.++ ++.+
T Consensus 22 ~~~e~VLILtplrna~~~l~~y~~~L~~L--~YP~~lIsLgfLv-~d~~ 67 (269)
T PF03452_consen 22 RNKESVLILTPLRNAASFLPDYFDNLLSL--TYPHELISLGFLV-SDSS 67 (269)
T ss_pred ccCCeEEEEEecCCchHHHHHHHHHHHhC--CCCchheEEEEEc-CCCc
Confidence 45577888887744457877777777777 33433 344444 4444
No 89
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=25.94 E-value=2.5e+02 Score=27.44 Aligned_cols=34 Identities=18% Similarity=0.188 Sum_probs=23.5
Q ss_pred ccccEEEEEecceecccC-chhhcCC-C-CCceeeee
Q 025063 104 VEYEKMIYLDGDIQVFDN-IDHLFDA-P-DGYFYAVM 137 (258)
Q Consensus 104 ~~ydrvlyLD~D~lv~~~-l~~Lf~~-~-~~~iaa~~ 137 (258)
.+||-++.||+|++.-+| +..+... . +..+|++.
T Consensus 219 ~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQ 255 (691)
T PRK05454 219 GAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQ 255 (691)
T ss_pred CCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEe
Confidence 368999999999999876 5555432 1 22366664
No 90
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=25.30 E-value=1.8e+02 Score=25.95 Aligned_cols=87 Identities=20% Similarity=0.222 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCEE----EEecccCCCCchhhhhhhhhhhceeeeecccccc
Q 025063 31 GVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQGCIV----REIEPVYPPENQTEFAMAYYVINYSKLRIWEFVE 105 (258)
Q Consensus 31 ~~~vl~~Sl~~~~-~~~~~~vl~~~~~~~~~~~~L~~~~~~i----~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~ 105 (258)
-+.-++.|+.+.+ +++++++ +.|+-+++..+.+++.+... ..+.+ ...+... .. ....-+ ....
T Consensus 69 ~~~~~l~s~~~~dyp~~eviv-v~d~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~gK-~~----al~~~l---~~~~ 137 (439)
T COG1215 69 VLEETLESLLSQDYPRYEVIV-VDDGSTDETYEILEELGAEYGPNFRVIYP--EKKNGGK-AG----ALNNGL---KRAK 137 (439)
T ss_pred hHHHHHHHHHhCCCCCceEEE-ECCCCChhHHHHHHHHHhhcCcceEEEec--cccCccc-hH----HHHHHH---hhcC
Confidence 3444555555543 4455544 66777787777777654322 21111 0011100 00 000011 1123
Q ss_pred ccEEEEEecceecccC-chhhcCC
Q 025063 106 YEKMIYLDGDIQVFDN-IDHLFDA 128 (258)
Q Consensus 106 ydrvlyLD~D~lv~~~-l~~Lf~~ 128 (258)
+|=|+.+|+|++.-.| +.++...
T Consensus 138 ~d~V~~~DaD~~~~~d~l~~~~~~ 161 (439)
T COG1215 138 GDVVVILDADTVPEPDALRELVSP 161 (439)
T ss_pred CCEEEEEcCCCCCChhHHHHHHhh
Confidence 8999999999999865 5566544
No 91
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=25.27 E-value=2.9e+02 Score=20.55 Aligned_cols=45 Identities=22% Similarity=0.237 Sum_probs=32.8
Q ss_pred CCccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCE
Q 025063 25 NGDYVKGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQGCI 70 (258)
Q Consensus 25 d~~y~~~~~vl~~Sl~~~~~~~~~~vl~~~~~~~~~~~~L~~~~~~ 70 (258)
+..|...+..++..|++.+.. ++.+++.-.++++..+.|++.|..
T Consensus 63 ~~~~~~~~~~~~~~L~~~g~~-~i~vivGG~~~~~~~~~l~~~Gvd 107 (132)
T TIGR00640 63 AGGHLTLVPALRKELDKLGRP-DILVVVGGVIPPQDFDELKEMGVA 107 (132)
T ss_pred hhhhHHHHHHHHHHHHhcCCC-CCEEEEeCCCChHhHHHHHHCCCC
Confidence 567888888888889887654 344545444677778889998864
No 92
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=23.11 E-value=1.6e+02 Score=25.59 Aligned_cols=32 Identities=19% Similarity=0.375 Sum_probs=27.5
Q ss_pred CCCEEEEECCCCCHHHHHHHHhCCCEEEEecc
Q 025063 45 EYPLVVAILPDVPEDHRQILESQGCIVREIEP 76 (258)
Q Consensus 45 ~~~~~vl~~~~~~~~~~~~L~~~~~~i~~v~~ 76 (258)
.|++++.+++..|.|.++.|+.+|.+++.++.
T Consensus 85 Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 85 GYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 58888878889999999999999999886654
No 93
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=22.49 E-value=2e+02 Score=24.48 Aligned_cols=94 Identities=18% Similarity=0.161 Sum_probs=52.7
Q ss_pred CccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhC-CCEEEEecccCCCCchhhhhhhhhhhceeeeeccccc
Q 025063 26 GDYVKGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQ-GCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFV 104 (258)
Q Consensus 26 ~~y~~~~~vl~~Sl~~~~~~~~~~vl~~~~~~~~~~~~L~~~-~~~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~ 104 (258)
-+....+..++.|+.+.......+++++++-++...+.++.. ...+.-+ ...+|. .++. .+.+.....+.
T Consensus 12 yn~~~~l~~~l~~l~~~~~~~~~iv~vDn~s~d~~~~~~~~~~~~~v~~i---~~~~Nl-G~ag-----g~n~g~~~a~~ 82 (305)
T COG1216 12 YNRGEDLVECLASLAAQTYPDDVIVVVDNGSTDGSLEALKARFFPNVRLI---ENGENL-GFAG-----GFNRGIKYALA 82 (305)
T ss_pred cCCHHHHHHHHHHHhcCCCCCcEEEEccCCCCCCCHHHHHhhcCCcEEEE---EcCCCc-cchh-----hhhHHHHHHhc
Confidence 466677788888888766554444446666666677777765 2333322 222221 1221 11222222222
Q ss_pred c-ccEEEEEecceecc-cCchhhcCC
Q 025063 105 E-YEKMIYLDGDIQVF-DNIDHLFDA 128 (258)
Q Consensus 105 ~-ydrvlyLD~D~lv~-~~l~~Lf~~ 128 (258)
+ ++-++.|+.|+++- +.|.+|.+.
T Consensus 83 ~~~~~~l~LN~D~~~~~~~l~~ll~~ 108 (305)
T COG1216 83 KGDDYVLLLNPDTVVEPDLLEELLKA 108 (305)
T ss_pred CCCcEEEEEcCCeeeChhHHHHHHHH
Confidence 2 33799999997775 447777765
No 94
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=21.55 E-value=3.2e+02 Score=19.72 Aligned_cols=46 Identities=15% Similarity=0.153 Sum_probs=30.7
Q ss_pred cCCccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCE
Q 025063 24 GNGDYVKGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQGCI 70 (258)
Q Consensus 24 ~d~~y~~~~~vl~~Sl~~~~~~~~~~vl~~~~~~~~~~~~L~~~~~~ 70 (258)
++..+...+..++..|++.+.. .+.+++.-...++..+++.+.|..
T Consensus 59 ~~~~~~~~~~~~~~~L~~~~~~-~i~i~~GG~~~~~~~~~~~~~G~d 104 (122)
T cd02071 59 LSGGHMTLFPEVIELLRELGAG-DILVVGGGIIPPEDYELLKEMGVA 104 (122)
T ss_pred cchhhHHHHHHHHHHHHhcCCC-CCEEEEECCCCHHHHHHHHHCCCC
Confidence 4677888888888888887654 333434434556667888888853
No 95
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=21.43 E-value=7.8e+02 Score=24.91 Aligned_cols=61 Identities=15% Similarity=0.015 Sum_probs=34.1
Q ss_pred EEECCCCCHHHHHHHHhCCCEEEEecccCCCCchhhhhhhhhhhceeeeeccccccccEEEEEecceecccCc
Q 025063 50 VAILPDVPEDHRQILESQGCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYEKMIYLDGDIQVFDNI 122 (258)
Q Consensus 50 vl~~~~~~~~~~~~L~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~ydrvlyLD~D~lv~~~l 122 (258)
++++|+-+++..+..++.++.++..+ ++...-+.... .. .+ ..+.|=|+.+|+|.++..|.
T Consensus 296 iVVDDgS~D~t~~la~~~~v~yI~R~-----~n~~gKAGnLN-~a-L~-----~a~GEyIavlDAD~ip~pdf 356 (852)
T PRK11498 296 WILDDGGREEFRQFAQEVGVKYIARP-----THEHAKAGNIN-NA-LK-----YAKGEFVAIFDCDHVPTRSF 356 (852)
T ss_pred EEEeCCCChHHHHHHHHCCcEEEEeC-----CCCcchHHHHH-HH-HH-----hCCCCEEEEECCCCCCChHH
Confidence 44677777887777777776654221 11100000000 00 01 13579999999999987664
No 96
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=20.40 E-value=2.7e+02 Score=21.04 Aligned_cols=23 Identities=22% Similarity=0.313 Sum_probs=17.1
Q ss_pred ccEEEEEecceecccC-chhhcCC
Q 025063 106 YEKMIYLDGDIQVFDN-IDHLFDA 128 (258)
Q Consensus 106 ydrvlyLD~D~lv~~~-l~~Lf~~ 128 (258)
.|-|+++|+|...-.+ +..+.+.
T Consensus 81 ~d~i~~~D~D~~~~~~~l~~l~~~ 104 (181)
T cd04187 81 GDAVITMDADLQDPPELIPEMLAK 104 (181)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHH
Confidence 4889999999998543 5666553
Done!