Query 025063
Match_columns 258
No_of_seqs 162 out of 1154
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 19:23:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025063.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025063hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u2u_A Glycogenin-1, GN-1, GN1 100.0 6.1E-46 2.1E-50 311.0 16.0 209 14-258 3-220 (263)
2 1ll2_A Glycogenin-1; protein-s 100.0 1.4E-41 4.9E-46 294.7 16.1 209 14-258 2-219 (333)
3 3tzt_A Glycosyl transferase fa 100.0 1.9E-36 6.4E-41 256.6 12.3 222 15-258 5-251 (276)
4 1g9r_A Glycosyl transferase; a 100.0 1.2E-34 4.1E-39 249.8 12.7 215 22-258 5-251 (311)
5 1o7q_A N-acetyllactosaminide a 82.1 2 6.7E-05 35.5 5.1 119 104-233 137-264 (289)
6 3ioh_A Histo-blood group ABO s 80.5 1.9 6.6E-05 35.7 4.6 115 105-232 147-272 (298)
7 1s4n_A Glycolipid 2-alpha-mann 72.0 18 0.00061 30.7 8.3 116 11-128 24-169 (348)
8 4ayl_A BOGT-metal-independent 70.9 11 0.00037 30.4 6.4 118 105-232 87-217 (246)
9 1qg8_A Protein (spore coat pol 67.4 11 0.00039 29.5 6.1 87 30-126 14-110 (255)
10 3bcv_A Putative glycosyltransf 59.8 4.1 0.00014 31.8 2.0 85 30-127 18-107 (240)
11 2d7i_A Polypeptide N-acetylgal 57.1 4.5 0.00015 36.8 2.0 101 15-128 113-220 (570)
12 3f1y_A Mannosyl-3-phosphoglyce 56.6 43 0.0015 28.7 8.2 102 15-126 95-202 (387)
13 1fo8_A Alpha-1,3-mannosyl-glyc 55.5 29 0.001 29.3 6.7 94 32-126 16-120 (343)
14 2p6w_A VP54, putative glycosyl 53.3 33 0.0011 26.5 5.9 18 102-119 69-86 (213)
15 3ckj_A Putative uncharacterize 44.8 33 0.0011 28.4 5.4 102 14-127 48-155 (329)
16 2z86_A Chondroitin synthase; G 44.0 89 0.003 28.2 8.6 99 15-126 94-196 (625)
17 1xhb_A Polypeptide N-acetylgal 40.8 12 0.00042 32.7 2.2 88 30-128 43-138 (472)
18 2ffu_A Ppgalnact-2, polypeptid 29.1 48 0.0016 29.2 4.1 24 105-128 146-170 (501)
19 2z86_A Chondroitin synthase; G 28.9 75 0.0026 28.7 5.5 98 13-126 374-476 (625)
20 4fix_A UDP-galactofuranosyl tr 22.7 67 0.0023 29.7 3.9 105 12-127 178-291 (657)
No 1
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=100.00 E-value=6.1e-46 Score=310.99 Aligned_cols=209 Identities=31% Similarity=0.488 Sum_probs=177.3
Q ss_pred CCeEEEEEeecCCccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCEEEEecccCCCCc--hhhhhhhhh
Q 025063 14 PKRAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPEN--QTEFAMAYY 91 (258)
Q Consensus 14 ~~~a~vt~l~~d~~y~~~~~vl~~Sl~~~~~~~~~~vl~~~~~~~~~~~~L~~~~~~i~~v~~~~~~~~--~~~~~~~~~ 91 (258)
+++|||| +++|++|++++.++++||++++++++++++++++++++.++.|++.+.+++.|+++..... .+.+.++.+
T Consensus 3 ~~~AyvT-l~td~~Yl~ga~vL~~SL~~~~s~~~lvvLvt~~vs~~~~~~L~~~~~~vi~V~~l~~~~~~~~~~~~rp~~ 81 (263)
T 3u2u_A 3 TDQAFVT-LTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPEL 81 (263)
T ss_dssp TTEEEEE-EESSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHSSEEEECCCCCCCCHHHHHHTTCTTG
T ss_pred cceEEEE-EEECHHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCHHHHHHHHHcCCeEEEeeecCCcchhhhhhhcCcch
Confidence 4899999 4589999999999999999999999999999999999999999999999998888765321 111233455
Q ss_pred hhceeeeeccccccccEEEEEecceecccCchhhcCCCCCceeeeechhcccCCCCCCcccccccccCCCCcCCCCcCCC
Q 025063 92 VINYSKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMGS 171 (258)
Q Consensus 92 ~~~~~Kl~l~~l~~ydrvlyLD~D~lv~~~l~~Lf~~~~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~ 171 (258)
..+|+|+.+|++.+||||||||+|++|++|+++||+++ .+||++|. +||
T Consensus 82 ~~~~~kl~~~~l~~~~~vlylD~D~~v~~~~~~Lf~~~--~~aA~~d~------------------------~~~----- 130 (263)
T 3u2u_A 82 GVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDRE--ELSAAPDP------------------------GWP----- 130 (263)
T ss_dssp GGGGGGGGGGGCTTCSEEEEECTTEEECSCCGGGGGSC--SSEEEECT------------------------TST-----
T ss_pred hHHhHHHHhccccCcceEEEEcCCEeeccCHHHHhCCC--cceEeccC------------------------CCC-----
Confidence 67999999999999999999999999999999999997 48888762 232
Q ss_pred CCCCCcceeEEEEecCHHHHHHHHHHhhcCCCCCCCChhHHHHHhcc-----CccccCCcccccceeecccCCCcc--CC
Q 025063 172 PPPLYFNAGMFVYEPNLLTYHDLLETVKVTPPTIFAEQDFLNMYFKD-----IYKPIPPTYNLVVAMLWRHLENVD--VD 244 (258)
Q Consensus 172 ~~~~~fNsGvmli~~~~~~~~~l~~~~~~~~~~~~~DQ~~LN~~~~~-----~~~~L~~~yN~~~~~~~~~~~~~~--~~ 244 (258)
.||||||||++++...++++++.+.+..++.++|||+||.+|.+ .++.||.+||++....+++.+.+. .+
T Consensus 131 ---~~fNsGv~li~p~~~~~~~l~~~~~~~~~~~~~DQd~LN~~f~~w~~~~~~~~Lp~~yN~~~~~~y~~~~~~~~~~~ 207 (263)
T 3u2u_A 131 ---DCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFKVFGA 207 (263)
T ss_dssp ---TSEEEEEEEECCCHHHHHHHHHHHHHHCCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEEHHHHHSSHHHHHHHGG
T ss_pred ---ccccCeEEEEcccHHHHHHHHHHHHhcCCCCcccHHHHHHHhccccccCeeEeCCcccccccchhccccHHHHhhcC
Confidence 69999999999999999999999887666788999999999987 689999999998765444333332 57
Q ss_pred CceEEEEeeccCCC
Q 025063 245 KVKVVHYCAAVSIS 258 (258)
Q Consensus 245 ~~~IiHy~~~~~kp 258 (258)
+++||||+| +.||
T Consensus 208 ~~~IIHf~g-~~KP 220 (263)
T 3u2u_A 208 SAKVVHFLG-RVKP 220 (263)
T ss_dssp GCSEEECCS-SSCG
T ss_pred CeEEEEECC-CCcC
Confidence 899999999 6787
No 2
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=100.00 E-value=1.4e-41 Score=294.71 Aligned_cols=209 Identities=29% Similarity=0.461 Sum_probs=172.7
Q ss_pred CCeEEEEEeecCCccHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCEEEEecccCCCCc--hhhhhhhhh
Q 025063 14 PKRAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLVVAILPDVPEDHRQILESQGCIVREIEPVYPPEN--QTEFAMAYY 91 (258)
Q Consensus 14 ~~~a~vt~l~~d~~y~~~~~vl~~Sl~~~~~~~~~~vl~~~~~~~~~~~~L~~~~~~i~~v~~~~~~~~--~~~~~~~~~ 91 (258)
++.||||+ ++|++|++++.|+++||++++++++++++++++++++.++.|++.+..++.|+++..... ...+.++++
T Consensus 2 s~~a~vt~-~~d~~Yl~~a~vl~~SL~~~~s~~~l~vlv~~~is~~~~~~L~~~~~~v~~v~~l~~~~~~~~~~~~~~~~ 80 (333)
T 1ll2_A 2 TDQAFVTL-TTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPEL 80 (333)
T ss_dssp CSEEEEEE-ESSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHCSEEEECCTTSTTSTTHHHHHHCGGG
T ss_pred CceEEEEE-EeCHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHhCCEEEEEeecCCcchhhcccccccch
Confidence 47899994 579999999999999999999999999889999999999999999988888887654321 111233445
Q ss_pred hhceeeeeccccccccEEEEEecceecccCchhhcCCCCCceeeeechhcccCCCCCCcccccccccCCCCcCCCCcCCC
Q 025063 92 VINYSKLRIWEFVEYEKMIYLDGDIQVFDNIDHLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMGS 171 (258)
Q Consensus 92 ~~~~~Kl~l~~l~~ydrvlyLD~D~lv~~~l~~Lf~~~~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~ 171 (258)
..+|+||++|++.+||||||||+|++|++||++||+++ .+||++| .+||
T Consensus 81 ~~t~~Kl~i~~l~~ydrvlYLDaD~lv~~di~eLf~~~--~~aAv~d------------------------~~~~----- 129 (333)
T 1ll2_A 81 GVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFERE--ELSAAPD------------------------PGWP----- 129 (333)
T ss_dssp HHHHHHGGGGGCTTCSEEEEECTTEEECSCCGGGGGSC--SSEEEEC------------------------SSST-----
T ss_pred HHHHHHHHHhHhcCCCeEEEEeCCEEeccCHHHHhCCC--ceeEEec------------------------CCCC-----
Confidence 67899999999999999999999999999999999997 4888865 2333
Q ss_pred CCCCCcceeEEEEecCHHHHHHHHHHhhcCCCCCCCChhHHHHHhccCc-----cccCCcccccceeecccCCCc--cCC
Q 025063 172 PPPLYFNAGMFVYEPNLLTYHDLLETVKVTPPTIFAEQDFLNMYFKDIY-----KPIPPTYNLVVAMLWRHLENV--DVD 244 (258)
Q Consensus 172 ~~~~~fNsGvmli~~~~~~~~~l~~~~~~~~~~~~~DQ~~LN~~~~~~~-----~~L~~~yN~~~~~~~~~~~~~--~~~ 244 (258)
.||||||||+|++...++++++.+.+...+.++||++||.+|.+.. ..||.+||++....+...+.+ ...
T Consensus 130 ---~~fNsGvmlin~~~~~~~~l~~~~~~~~~~~~~DQ~~LN~~f~~~~~~~~~~~Lp~~yN~~~~~~~~~~p~~~~~~~ 206 (333)
T 1ll2_A 130 ---DCFNSGVFVYQPSVETYNQLLHVASEQGSFDGGDQGLLNTFFNSWATTDIRKHLPFIYNLSSISIYSYLPAFKAFGA 206 (333)
T ss_dssp ---TSEEEEEEEECCCHHHHHHHHHHHHHTCCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEETTHHHHTHHHHHHHGG
T ss_pred ---cceeeeEEEEeCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHhhcccCccccCCcHHhcccccchhccHHHHhhcC
Confidence 6899999999999999999999988766778899999999998643 799999999876433321112 157
Q ss_pred CceEEEEeeccCCC
Q 025063 245 KVKVVHYCAAVSIS 258 (258)
Q Consensus 245 ~~~IiHy~~~~~kp 258 (258)
+++||||+| +.||
T Consensus 207 ~~~IiHf~g-~~KP 219 (333)
T 1ll2_A 207 NAKVVHFLG-QTKP 219 (333)
T ss_dssp GCSEEECCS-SCCG
T ss_pred CCEEEEECC-CCCC
Confidence 899999999 6787
No 3
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=100.00 E-value=1.9e-36 Score=256.60 Aligned_cols=222 Identities=19% Similarity=0.269 Sum_probs=146.5
Q ss_pred CeEEEEEeecCCccHHHHHHHHHHHHhcCCCCCEE-EEECCCCCHHHHHHHHh----CCCEEEEecccCCCCchhhh--h
Q 025063 15 KRAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPLV-VAILPDVPEDHRQILES----QGCIVREIEPVYPPENQTEF--A 87 (258)
Q Consensus 15 ~~a~vt~l~~d~~y~~~~~vl~~Sl~~~~~~~~~~-vl~~~~~~~~~~~~L~~----~~~~i~~v~~~~~~~~~~~~--~ 87 (258)
+..+| +|+|++|+.++.|++.||++++++.++. +++++++++++++.|++ .++++..++. +. +..+.+ .
T Consensus 5 ~i~I~--~~~d~~Y~~~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~-~~-~~~~~~~~~ 80 (276)
T 3tzt_A 5 ADALL--LTLDENYIPQMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRA-TD-DLFSFAKVT 80 (276)
T ss_dssp CEEEE--EECCGGGHHHHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEEC-C-----------
T ss_pred eEEEE--EEeCHhHHHHHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEe-CH-HHHhcCccc
Confidence 35566 6789999999999999999999855543 34578899998877765 3555543322 11 111111 1
Q ss_pred hhhhhhceeeeeccccc--cccEEEEEecceecccCchhhcCCC--CCceeeeechhcccCCCCCCcccccccccCCCCc
Q 025063 88 MAYYVINYSKLRIWEFV--EYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKV 163 (258)
Q Consensus 88 ~~~~~~~~~Kl~l~~l~--~ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (258)
.+++..+|+||++|++. +++||||||+|++|++|+++||+++ +..+||++|+.... +.. .. ...
T Consensus 81 ~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~-~~~------~~-----~~~ 148 (276)
T 3tzt_A 81 DRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTD-MAN------NV-----NRI 148 (276)
T ss_dssp ---CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC-------------------------
T ss_pred cccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccch-HHH------HH-----HHh
Confidence 23446789999999985 5999999999999999999999986 34699999865321 100 00 001
Q ss_pred CCCCcCCCCCCCCcceeEEEEecCHHHH----HHHHHHhhcCC-CCCCCChhHHHHHhccCccccCC-cccccceeec--
Q 025063 164 QWPVEMGSPPPLYFNAGMFVYEPNLLTY----HDLLETVKVTP-PTIFAEQDFLNMYFKDIYKPIPP-TYNLVVAMLW-- 235 (258)
Q Consensus 164 ~~p~~~g~~~~~~fNsGvmli~~~~~~~----~~l~~~~~~~~-~~~~~DQ~~LN~~~~~~~~~L~~-~yN~~~~~~~-- 235 (258)
.++. +..||||||||+|+++|+. +++++++++.. ++.++|||+||.+|.++|+.||. +||++.....
T Consensus 149 ----~l~~-~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~f~~~~~~Lp~~~wN~~~~~~~~~ 223 (276)
T 3tzt_A 149 ----RLGT-DTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNHMNLLLPDQDILNAMYGDRIYPLDDLIYNYDARNYSSY 223 (276)
T ss_dssp ------------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC--------CHHHHHHHGGGEEEEEHHHHSEETTCHHHH
T ss_pred ----cCCC-CCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhccccccCCChhHHHHHHhCCEEECCchheeeecccchhh
Confidence 1222 2489999999999999865 56677776653 46789999999999999999999 9999875421
Q ss_pred --ccCCCc----cCCCceEEEEeeccCCC
Q 025063 236 --RHLENV----DVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 236 --~~~~~~----~~~~~~IiHy~~~~~kp 258 (258)
.....+ ..++++||||+| ..||
T Consensus 224 ~~~~~~~~~~~~~~~~~~iiHy~g-~~KP 251 (276)
T 3tzt_A 224 LIRSKKQADLAWLMDHTVVLHFCG-RDKP 251 (276)
T ss_dssp HHHTTTCCSHHHHHHHCCEEECCS-SCCT
T ss_pred hccccchhhhhhhccCCeEEEECC-CCCC
Confidence 111121 256899999999 6787
No 4
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=100.00 E-value=1.2e-34 Score=249.82 Aligned_cols=215 Identities=24% Similarity=0.375 Sum_probs=152.8
Q ss_pred eecCCccHHHHHHHHHHH-HhcCC-CCCEEEEECCCCCHHHHHHHHhC----CCEEEEecccCCCCchhhhh---hhhhh
Q 025063 22 LAGNGDYVKGVVGLAKGL-RKAKS-EYPLVVAILPDVPEDHRQILESQ----GCIVREIEPVYPPENQTEFA---MAYYV 92 (258)
Q Consensus 22 l~~d~~y~~~~~vl~~Sl-~~~~~-~~~~~vl~~~~~~~~~~~~L~~~----~~~i~~v~~~~~~~~~~~~~---~~~~~ 92 (258)
+++|++|+.++.|+++|| +++++ ++.+++ ++++++++.++.|++. +.++..++ ++.. ..+.++ ..++.
T Consensus 5 ~~~d~~Y~~~~~vli~Sl~l~~~~~~~~f~i-l~~~ls~~~~~~L~~~~~~~~~~i~~~~-~~~~-~~~~~~~~~~~~s~ 81 (311)
T 1g9r_A 5 FAADDNYAAYLCVAAKSVEAAHPDTEIRFHV-LDAGISEANRAAVAANLRGGGGNIRFID-VNPE-DFAGFPLNIRHISI 81 (311)
T ss_dssp EEECGGGHHHHHHHHHHHHHTCTTSCCEEEE-EESSCCHHHHHHHHHHSGGGTTTEEEEE-CCGG-GGTTSCCCCTTCCG
T ss_pred EECCHhHHHHHHHHHHHHHHHcCCCCceEEE-EECCCCHHHHHHHHHHHHHcCCEEEEEE-cCHH-HHhcCccccccCCH
Confidence 567999999999999999 66543 345555 4678999998888764 55443222 1110 011111 12345
Q ss_pred hceeeeecccc-ccccEEEEEecceecccCchhhcCCC--CCceeeeechhcccCCCCCCcccccccccCCCCcCCCCcC
Q 025063 93 INYSKLRIWEF-VEYEKMIYLDGDIQVFDNIDHLFDAP--DGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEM 169 (258)
Q Consensus 93 ~~~~Kl~l~~l-~~ydrvlyLD~D~lv~~~l~~Lf~~~--~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 169 (258)
.+|.||++|++ .++|||||||+|++|++||++||+++ +..+||++|+.+.. .+. +...+
T Consensus 82 ~~y~Rl~l~~ll~~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~----~~~--------------~~~~~ 143 (311)
T 1g9r_A 82 TTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVER----QEG--------------YKQKI 143 (311)
T ss_dssp GGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHT----STT--------------HHHHT
T ss_pred HHHHHHHHHHHhhhcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhh----hHH--------------HHHhc
Confidence 78999999996 58999999999999999999999985 45699999876431 000 00122
Q ss_pred CC-CCCCCcceeEEEEecCHHH----HHHHHHHhhcC-CCCCCCChhHHHHHhccCccccCCcccccceeec-----ccC
Q 025063 170 GS-PPPLYFNAGMFVYEPNLLT----YHDLLETVKVT-PPTIFAEQDFLNMYFKDIYKPIPPTYNLVVAMLW-----RHL 238 (258)
Q Consensus 170 g~-~~~~~fNsGvmli~~~~~~----~~~l~~~~~~~-~~~~~~DQ~~LN~~~~~~~~~L~~~yN~~~~~~~-----~~~ 238 (258)
|. ....||||||||+|+++|+ .+++++++++. ..+.++|||+||.+|.++|..||.+||++..... ...
T Consensus 144 ~~~~~~~yfNsGv~linl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~lN~~f~~~~~~Lp~~wN~~~~~~~~~~~~~~~ 223 (311)
T 1g9r_A 144 GMADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWFAS 223 (311)
T ss_dssp TCCTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHTTTCSSHHHHHHHHHHTTSEEEECGGGSBCHHHHHTCC----C
T ss_pred CCCCCCceEeeeeeeeeHHHHHhcchHHHHHHHHHhccCcCccCCcCHHHHHHcCCEEEcChhhccCcchhhHHhhhccc
Confidence 32 2357999999999999975 57777777654 3467899999999999999999999999875421 110
Q ss_pred C---C-----c-cCCCceEEEEeeccCCC
Q 025063 239 E---N-----V-DVDKVKVVHYCAAVSIS 258 (258)
Q Consensus 239 ~---~-----~-~~~~~~IiHy~~~~~kp 258 (258)
. . . ..++++||||+| +.||
T Consensus 224 ~~~~~~~~~~~~~~~~~~iiHy~g-~~KP 251 (311)
T 1g9r_A 224 RHTDPLYRDRTNTVMPVAVSHYCG-PAKP 251 (311)
T ss_dssp SCCCHHHHHHHSCCSSCSEEECCS-SCCT
T ss_pred ccchhhhhHHhhccCCCEEEEeCC-cCCC
Confidence 1 0 1 145899999999 6787
No 5
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=82.08 E-value=2 Score=35.47 Aligned_cols=119 Identities=17% Similarity=0.256 Sum_probs=62.7
Q ss_pred ccccEEEEEecceecccCch-hhcCCCCCceeeeechhcccCCCCCCcccccccccCCCCcCCCCcCCCCCCCCcceeEE
Q 025063 104 VEYEKMIYLDGDIQVFDNID-HLFDAPDGYFYAVMDCFCEKTWSNSPQFTIGYCQQCPEKVQWPVEMGSPPPLYFNAGMF 182 (258)
Q Consensus 104 ~~ydrvlyLD~D~lv~~~l~-~Lf~~~~~~iaa~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~fNsGvm 182 (258)
.++|=+.++|+|+++.+++. |.+ . ..+|.....+-. .+...+-++....+ ..-.|... .+-|+-+|+.
T Consensus 137 ~evDYLf~~dvd~~F~~~vG~E~L--g-~lv~~lHp~~y~---~~~~~fpYERrp~S--~AyIp~~e---GdfYY~Ga~f 205 (289)
T 1o7q_A 137 HEVDFLFCMDVDQVFQDKFGVETL--G-ESVAQLQAWWYK---ADPNDFTYERRKES--AAYIPFGE---GDFYYHAAIF 205 (289)
T ss_dssp HHCSEEEEECSSEEECSCBCGGGC--S-SEEEEECTTTTT---SCGGGSCCCCCTTS--TTCCCTTC---CSCCEEEEEE
T ss_pred hcCCEEEEeeCCcEeeccCCHHHH--H-HHHHccCHHHhC---CCCCCCCCCCCcCc--eeeecCCC---CCEEEEceee
Confidence 37899999999999999875 222 1 223433221100 00000111111000 01122222 3578888887
Q ss_pred EEecCH------HHHHHHHHHhhcCCCCCCCChhHHHHHhc--cCccccCCccccccee
Q 025063 183 VYEPNL------LTYHDLLETVKVTPPTIFAEQDFLNMYFK--DIYKPIPPTYNLVVAM 233 (258)
Q Consensus 183 li~~~~------~~~~~l~~~~~~~~~~~~~DQ~~LN~~~~--~~~~~L~~~yN~~~~~ 233 (258)
-=.+.. .-.+.++.-.+++-...+.|..-||.+|- ...+.||+.|++....
T Consensus 206 GGt~~~vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNKYf~~~KPtKvLSPEY~wd~~~ 264 (289)
T 1o7q_A 206 GGTPTQVLNITQECFKGILKDKKNDIEAQWHDESHLNKYFLLNKPTKILSPEYCWDYHI 264 (289)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSCCSEEECGGGSBCGGG
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhCCeEEEecchhhhhHHHhhcCCCEEECHHHCCCccc
Confidence 544433 11222222233332357899999999864 3468899999986653
No 6
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=80.49 E-value=1.9 Score=35.68 Aligned_cols=115 Identities=16% Similarity=0.249 Sum_probs=59.2
Q ss_pred cccEEEEEecceecccCch-hhcCCCCCceeeeechhcccCCCCCCc--ccccccccCCCCcCCCCcCCCCCCCCcceeE
Q 025063 105 EYEKMIYLDGDIQVFDNID-HLFDAPDGYFYAVMDCFCEKTWSNSPQ--FTIGYCQQCPEKVQWPVEMGSPPPLYFNAGM 181 (258)
Q Consensus 105 ~ydrvlyLD~D~lv~~~l~-~Lf~~~~~~iaa~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~p~~~g~~~~~~fNsGv 181 (258)
++|=+..+|+|+.+.+++. |.+ +..+|..... +-+.+. +-++....+ ..-.|... .+-|+-+|+
T Consensus 147 EvDyLfc~dvd~~F~~~vG~E~L---g~lva~lHp~-----~y~~~~~~FpYERrp~S--~AyIp~~e---GdfYY~ga~ 213 (298)
T 3ioh_A 147 EVDYLVCVDVDMEFRDHVGVEIL---TPLFGTLHPG-----FYGSSREAFTYERRPQS--QAYIPKDE---GDFYYGGAF 213 (298)
T ss_dssp HCSEEEEEESSEEECSCBCGGGC---SSEEEEBCTT-----TTTSCGGGSCCCCCTTS--TTCCCTTC---CSCCBCTTE
T ss_pred cCCEEEEecCCCeeccCccHHHh---HhhHhhcChh-----hhcCCcccCcccCCccc--cccccCCC---CCeEEeeee
Confidence 6899999999999998765 221 0112222211 100010 111111000 01122122 356777777
Q ss_pred EEEecCH------HHHHHHHHHhhcCCCCCCCChhHHHHHhcc--CccccCCcccccce
Q 025063 182 FVYEPNL------LTYHDLLETVKVTPPTIFAEQDFLNMYFKD--IYKPIPPTYNLVVA 232 (258)
Q Consensus 182 mli~~~~------~~~~~l~~~~~~~~~~~~~DQ~~LN~~~~~--~~~~L~~~yN~~~~ 232 (258)
.-=.+.. .-.+.+++-.+++-...+.|..-||.+|-. -.+.|++.|++...
T Consensus 214 fGGt~~~vl~Lt~~C~~~i~~D~~n~IeA~WhDESHLNKYfl~hKPtKvLSPEY~Wd~~ 272 (298)
T 3ioh_A 214 FGGSVQEVQRLTRACHQAMMVDQANGIEAVWHDESHLNKYLLRHKPTKVLSPEYLWDQQ 272 (298)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSCCSEEECGGGSBCHH
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHhCCceEeccchhhhhhhhhhcCCCceeCHHHcCCcc
Confidence 6433333 112222222333324578999999998763 36899999997543
No 7
>1s4n_A Glycolipid 2-alpha-mannosyltransferase; alpha/beta fold, nucleotide-binding domain, rossmann fold; HET: NAG BMA MAN NDG; 2.01A {Saccharomyces cerevisiae} SCOP: c.68.1.16 PDB: 1s4o_A* 1s4p_A*
Probab=72.01 E-value=18 Score=30.70 Aligned_cols=116 Identities=22% Similarity=0.270 Sum_probs=71.1
Q ss_pred CCCCCeEEEEEeecCCccHHHHHHHHHHHHh-cCC--CCCEEEEECCCCCHHHHHHHHhC--C-CEEEEecc--cCCCCc
Q 025063 11 MNVPKRAYVTFLAGNGDYVKGVVGLAKGLRK-AKS--EYPLVVAILPDVPEDHRQILESQ--G-CIVREIEP--VYPPEN 82 (258)
Q Consensus 11 ~~~~~~a~vt~l~~d~~y~~~~~vl~~Sl~~-~~~--~~~~~vl~~~~~~~~~~~~L~~~--~-~~i~~v~~--~~~~~~ 82 (258)
-++.+-|+|+ |+-|. =+.+++-.++||-. .|. .||.+.|-+...+++.++.+++. | +....|.. ...|+.
T Consensus 24 ~~r~nAtfV~-L~RN~-el~~~l~Si~~vE~rFN~~y~YpwvFlNd~pFteeFk~~~~~~~sg~v~Fg~Ip~e~W~~P~~ 101 (348)
T 1s4n_A 24 AGKPKACYVT-LVRNK-ELKGLLSSIKYVENKINKKFPYPWVFLNDEPFTEEFKEAVTKAVSSEVKFGILPKEHWSYPEW 101 (348)
T ss_dssp CSCCCEEEEE-ECCGG-GHHHHHHHHHHHHHHTTTTSCCCEEEEESSCCCHHHHHHHHHHCSSCEEEEECCGGGSSCCTT
T ss_pred CCCCceEEEE-EeccH-HHHHHHHHHHHHHHHhhccCCCCEEEecCCCCCHHHHHHHHHhcCcceEEEEcCHHHcCCCCC
Confidence 3467889998 55554 48888888888864 354 47888878888999998888764 2 23333332 222321
Q ss_pred h--hhhhhh---------h-hhhc---eeee------eccccccccEEEEEecceecccCch-hhcCC
Q 025063 83 Q--TEFAMA---------Y-YVIN---YSKL------RIWEFVEYEKMIYLDGDIQVFDNID-HLFDA 128 (258)
Q Consensus 83 ~--~~~~~~---------~-~~~~---~~Kl------~l~~l~~ydrvlyLD~D~lv~~~l~-~Lf~~ 128 (258)
. ...... + ...+ ..|+ ..+.|.+|+=.-=+++|+-+.-||+ ++|..
T Consensus 102 Id~~~a~~~~~~~~~~i~Yg~s~sYr~MCRf~SG~F~~h~~l~~YdyYWRvEPdv~~~CDi~YDpF~~ 169 (348)
T 1s4n_A 102 INQTKAAEIRADAATKYIYGGSESYRHMCRYQSGFFWRHELLEEYDWYWRVEPDIKLYCDINYDVFKW 169 (348)
T ss_dssp SCHHHHHHHHHHHTTTSTTTTCHHHHHHHHHHHHTGGGSGGGTTCSEEEECCTTCEECSCCCSCHHHH
T ss_pred cCHHHHHHHHHHHhcCCccCCCcchhhhhhhhhhhhccCcccccCceEEEeCCCceeecCCCCCccHH
Confidence 1 001000 0 0001 1121 1234568999999999999999998 77754
No 8
>4ayl_A BOGT-metal-independent glycosyltransferase; histo-blood group enzyme; HET: EPE; 1.92A {Bacteroides ovatus} PDB: 4ayj_A*
Probab=70.85 E-value=11 Score=30.38 Aligned_cols=118 Identities=14% Similarity=0.218 Sum_probs=57.7
Q ss_pred cccEEEEEecceecccCch-hhc-CCCCC-ceeeeechhcccCCCCCCc--ccccccccCCCCcCCCCcCCCCCCCCcce
Q 025063 105 EYEKMIYLDGDIQVFDNID-HLF-DAPDG-YFYAVMDCFCEKTWSNSPQ--FTIGYCQQCPEKVQWPVEMGSPPPLYFNA 179 (258)
Q Consensus 105 ~ydrvlyLD~D~lv~~~l~-~Lf-~~~~~-~iaa~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~p~~~g~~~~~~fNs 179 (258)
++|=+..+|+|+++.+++. |.+ -..++ .+|....-.- +.|. +-.+....+ ..-.|... .+-|+-+
T Consensus 87 evDyLf~~dvd~~F~~~vG~E~L~p~~~~~lva~lHp~~y-----~~~~~~fpYERrp~S--~AyIp~~e---GdfYY~g 156 (246)
T 4ayl_A 87 ETDYLFFFNANLLFTSPIGKEILPPSDSNGLLGTMHPGFY-----NKPNSEFTYERRDAS--TAYIPEGE---GRYYYAG 156 (246)
T ss_dssp HCSEEEEECTTEEECSCBCGGGSCCTTSCCEEEEBCGGGC----------------------------------CCCBCS
T ss_pred hCCEEEEEeCCceeeccCCHHHcccCCCCCEEEEechhhh-----CCCcccCcccCCccc--cccccCCC---CCeEEee
Confidence 4899999999999999876 433 22222 3443332110 0010 111111000 01112122 3567777
Q ss_pred eEEEEecCH------HHHHHHHHHhhcCCCCCCCChhHHHHHhc-cCcc-ccCCcccccce
Q 025063 180 GMFVYEPNL------LTYHDLLETVKVTPPTIFAEQDFLNMYFK-DIYK-PIPPTYNLVVA 232 (258)
Q Consensus 180 Gvmli~~~~------~~~~~l~~~~~~~~~~~~~DQ~~LN~~~~-~~~~-~L~~~yN~~~~ 232 (258)
|+.-=.+.. .-.+.+++-.+++-...+.|..-||.+|- .+-+ .||+.|++...
T Consensus 157 a~fGG~~~~vl~Lt~~c~~~i~~D~~n~I~A~whDESHLNKYfl~~KP~~vLSPEY~wd~~ 217 (246)
T 4ayl_A 157 GLSGGCTKAYLKLCTTICSWVDRDATNHIIPIWHDESLINKYFLDNPPAITLSPAYLYPEG 217 (246)
T ss_dssp SEEEEEHHHHHHHHHHHHHHHHHHHTTCSSCSCCHHHHHHHHHHHSCCSEEECGGGGEETT
T ss_pred eecCCcHHHHHHHHHHHHHHHHHHHhCCceEeccchhHhHHHHHhCCCCeeeCHHHcCCcc
Confidence 776433333 12222222223322357899999999875 3444 59999987544
No 9
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=67.37 E-value=11 Score=29.50 Aligned_cols=87 Identities=15% Similarity=0.139 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhC--CCEEEEecccCCC------Cchhhhhhhhhhhceeeeec
Q 025063 30 KGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQ--GCIVREIEPVYPP------ENQTEFAMAYYVINYSKLRI 100 (258)
Q Consensus 30 ~~~~vl~~Sl~~~~-~~~~~~vl~~~~~~~~~~~~L~~~--~~~i~~v~~~~~~------~~~~~~~~~~~~~~~~Kl~l 100 (258)
..+.-++.||.+.. +++.+ ++++++-+++..+.+++. ...+.-+.. ... .+. .... .+=..
T Consensus 14 ~~l~~~l~Sl~~q~~~~~ei-ivvDd~S~d~t~~~~~~~~~~~~i~~i~~-~~~~~~~~~~n~-G~~~-------a~N~g 83 (255)
T 1qg8_A 14 DYVAKSISSILSQTFSDFEL-FIMDDNSNEETLNVIRPFLNDNRVRFYQS-DISGVKERTEKT-RYAA-------LINQA 83 (255)
T ss_dssp TTHHHHHHHHHTCSCCCEEE-EEEECSCCHHHHHHHGGGGGSTTEEEEEC-CCCSHHHHHSSC-HHHH-------HHHHH
T ss_pred HHHHHHHHHHHhccCCceEE-EEEECCCCchHHHHHHHHhhcCCEEEEec-cccccccccccc-CHHH-------HHHHH
Confidence 44556778887653 33333 446777777777777765 222221211 100 111 1111 11111
Q ss_pred cccccccEEEEEecceecccC-chhhc
Q 025063 101 WEFVEYEKMIYLDGDIQVFDN-IDHLF 126 (258)
Q Consensus 101 ~~l~~ydrvlyLD~D~lv~~~-l~~Lf 126 (258)
.+....|-|++||+|.++..+ +..+.
T Consensus 84 i~~a~g~~i~~lD~Dd~~~~~~l~~~~ 110 (255)
T 1qg8_A 84 IEMAEGEYITYATDDNIYMPDRLLKMV 110 (255)
T ss_dssp HHHCCCSEEEEEETTEEECTTHHHHHH
T ss_pred HHHcCCCEEEEeCCCCccChHHHHHHH
Confidence 222356889999999999755 44444
No 10
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=59.79 E-value=4.1 Score=31.79 Aligned_cols=85 Identities=16% Similarity=0.177 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhC---CCEEEEecccCCCCchhhhhhhhhhhceeeeecccccc
Q 025063 30 KGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQ---GCIVREIEPVYPPENQTEFAMAYYVINYSKLRIWEFVE 105 (258)
Q Consensus 30 ~~~~vl~~Sl~~~~-~~~~~~vl~~~~~~~~~~~~L~~~---~~~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~l~~ 105 (258)
..+..++.||.+.. +++.+ ++++++-+++..+.+++. ...+.-+.. ++. .+...+. ...+...
T Consensus 18 ~~l~~~l~Sl~~q~~~~~ei-IvvDd~S~d~t~~~~~~~~~~~~~i~~i~~----~n~-G~~~a~N-------~g~~~a~ 84 (240)
T 3bcv_A 18 KYLDQCVQALLAQTLSDIEI-ILIDDESPDNCPKICDDYAAQYPNIKVIHK----KNA-GLGMACN-------SGLDVAT 84 (240)
T ss_dssp TTHHHHHHHHHTCSSSSEEE-EEEECCCSSSHHHHHHHHHHHCSSEEEEEC----CCC-CHHHHHH-------HHHHHCC
T ss_pred HHHHHHHHHHHhCcCCCeEE-EEEECCCCcCHHHHHHHHHhhCCCEEEEEC----CCC-ChHHHHH-------HHHHHcC
Confidence 34456778887653 33333 446666666555555443 222322221 111 1111111 1111224
Q ss_pred ccEEEEEecceecccC-chhhcC
Q 025063 106 YEKMIYLDGDIQVFDN-IDHLFD 127 (258)
Q Consensus 106 ydrvlyLD~D~lv~~~-l~~Lf~ 127 (258)
.|-|++||+|.++..+ +..+.+
T Consensus 85 g~~i~~lD~Dd~~~~~~l~~l~~ 107 (240)
T 3bcv_A 85 GEYVAFCDSDDYVDSDMYMTMYN 107 (240)
T ss_dssp SSEEEECCTTCCCCTTHHHHHHH
T ss_pred CCEEEEECCCCcCCHHHHHHHHH
Confidence 5889999999998755 444543
No 11
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=57.12 E-value=4.5 Score=36.83 Aligned_cols=101 Identities=12% Similarity=0.101 Sum_probs=51.0
Q ss_pred CeEEEEEeecCCccHHHHHHHHHHHHhcCCC-CC-EEEEECCCCCHHH-HHHHHhC---CCEEEEecccCCCCchhhhhh
Q 025063 15 KRAYVTFLAGNGDYVKGVVGLAKGLRKAKSE-YP-LVVAILPDVPEDH-RQILESQ---GCIVREIEPVYPPENQTEFAM 88 (258)
Q Consensus 15 ~~a~vt~l~~d~~y~~~~~vl~~Sl~~~~~~-~~-~~vl~~~~~~~~~-~~~L~~~---~~~i~~v~~~~~~~~~~~~~~ 88 (258)
+..+|. .+-|.. +..+..++.||++.... .. -+|+++++-++.. .+.|++. ...+.-+. .+++. .+..
T Consensus 113 ~vSVII-p~yNe~-~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~---~~~n~-G~~~ 186 (570)
T 2d7i_A 113 NTSIII-PFHNEG-WSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILR---TKKRE-GLIR 186 (570)
T ss_dssp CEEEEE-EESSCC-HHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEE---CSSCC-CHHH
T ss_pred CeEEEE-EECCCC-HHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEE---CCCCC-CHHH
Confidence 445543 223443 56777888999876543 22 2344666655555 4555442 12222221 11111 1111
Q ss_pred hhhhhceeeeeccccccccEEEEEecceecccC-chhhcCC
Q 025063 89 AYYVINYSKLRIWEFVEYEKMIYLDGDIQVFDN-IDHLFDA 128 (258)
Q Consensus 89 ~~~~~~~~Kl~l~~l~~ydrvlyLD~D~lv~~~-l~~Lf~~ 128 (258)
. +-...+...-|-|++||+|+.+..+ |..|.+.
T Consensus 187 A-------~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~ 220 (570)
T 2d7i_A 187 T-------RMLGASVATGDVITFLDSHCEANVNWLPPLLDR 220 (570)
T ss_dssp H-------HHHHHHHCCSSEEEECCSSEEECTTCSHHHHHH
T ss_pred H-------HHHHHHhcCCCEEEEEcCCccccccHHHHHHHH
Confidence 1 1111222246889999999999754 5556543
No 12
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=56.63 E-value=43 Score=28.70 Aligned_cols=102 Identities=14% Similarity=0.104 Sum_probs=51.1
Q ss_pred CeEEEEEeecCC-ccHHHHHHHHHHHHhc-CCCCCEEEEECCCCCHHHHHHHHhCCCEEEEec--ccCCCCchhhhhhhh
Q 025063 15 KRAYVTFLAGNG-DYVKGVVGLAKGLRKA-KSEYPLVVAILPDVPEDHRQILESQGCIVREIE--PVYPPENQTEFAMAY 90 (258)
Q Consensus 15 ~~a~vt~l~~d~-~y~~~~~vl~~Sl~~~-~~~~~~~vl~~~~~~~~~~~~L~~~~~~i~~v~--~~~~~~~~~~~~~~~ 90 (258)
+..+|. -+-|+ .++..++..+.++.+. .....+ ++++++-++.+.+.+++.+.+++... .+..+.+. ....
T Consensus 95 ~vSVVI-P~yNe~~~l~~~l~sl~~~l~~~~~~~EI-IVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~-G~g~-- 169 (387)
T 3f1y_A 95 TVSAVL-PSRNVADTVGGIIDEIHALNERAPLIDQI-LVVDADSEDGTAGVAASHGAEVYSENELMSGYGDAH-GKGD-- 169 (387)
T ss_dssp CEEEEE-EESSCTTTHHHHHHHHHHHHHHSCCCSEE-EEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCC-SHHH--
T ss_pred eEEEEE-EcCCCHHHHHHHHHHHHHHHhcCCCCeEE-EEEcCcCCccHHHHHHHhCchhcccceeEecCCccC-CHHH--
Confidence 444443 22343 4555554444443322 334454 44777777888888888877654321 11111111 1111
Q ss_pred hhhceeeeeccccccccEEEEEeccee-cc-cCchhhc
Q 025063 91 YVINYSKLRIWEFVEYEKMIYLDGDIQ-VF-DNIDHLF 126 (258)
Q Consensus 91 ~~~~~~Kl~l~~l~~ydrvlyLD~D~l-v~-~~l~~Lf 126 (258)
.+-........|-|+++|+|.. +. +.+..|.
T Consensus 170 -----A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~ 202 (387)
T 3f1y_A 170 -----AMWRALSVTRGDLVLYIDADTRDFRPQLAYGVL 202 (387)
T ss_dssp -----HHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTH
T ss_pred -----HHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHH
Confidence 1111112235789999999998 43 2344443
No 13
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=55.47 E-value=29 Score=29.34 Aligned_cols=94 Identities=16% Similarity=0.215 Sum_probs=49.8
Q ss_pred HHHHHHHHHhcCCCC--CEEEEECCCCCHHHHHHHHhCCCEEEEec--cc---C-CCCchhhhhhh-hhhhc--eeeeec
Q 025063 32 VVGLAKGLRKAKSEY--PLVVAILPDVPEDHRQILESQGCIVREIE--PV---Y-PPENQTEFAMA-YYVIN--YSKLRI 100 (258)
Q Consensus 32 ~~vl~~Sl~~~~~~~--~~~vl~~~~~~~~~~~~L~~~~~~i~~v~--~~---~-~~~~~~~~~~~-~~~~~--~~Kl~l 100 (258)
+..++.||++..+.. ..+++..++-.++.++.+++++..+..+. .+ . .+++. .+... ..... +..=.+
T Consensus 16 l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~~I~~~~~~d~~~~~~~~~N~-g~~~y~~ia~h~~~al~~v 94 (343)
T 1fo8_A 16 VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNIAVQPDHR-KFQGYYKIARHYRWALGQI 94 (343)
T ss_dssp HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCCCCCTTCG-GGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCCceEEEEcCCccccccchhhc-CcccchhHhHHHHHHHHHH
Confidence 778889998876422 23444667777888888887654333221 11 1 11111 11000 00000 111122
Q ss_pred cccccccEEEEEecceecccCchhhc
Q 025063 101 WEFVEYEKMIYLDGDIQVFDNIDHLF 126 (258)
Q Consensus 101 ~~l~~ydrvlyLD~D~lv~~~l~~Lf 126 (258)
++...+++||+||-|+++-.+.=+.|
T Consensus 95 f~~~~~~~vIiLEDDl~~spdF~~y~ 120 (343)
T 1fo8_A 95 FHNFNYPAAVVVEDDLEVAPDFFEYF 120 (343)
T ss_dssp HTTSCCSEEEEEETTEEECTTHHHHH
T ss_pred HHhccCCEEEEEcCCCeECHHHHHHH
Confidence 33336999999999999987654433
No 14
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=53.28 E-value=33 Score=26.53 Aligned_cols=18 Identities=33% Similarity=0.534 Sum_probs=15.8
Q ss_pred ccccccEEEEEecceecc
Q 025063 102 EFVEYEKMIYLDGDIQVF 119 (258)
Q Consensus 102 ~l~~ydrvlyLD~D~lv~ 119 (258)
...+.+-+-|||+|++|.
T Consensus 69 khPeAEWfWWLDsDAlIM 86 (213)
T 2p6w_A 69 KFPSTEWFLWLDSDVYVN 86 (213)
T ss_dssp HCTTCSEEEEECTTEEEC
T ss_pred HCCCceEEEEecCCceee
Confidence 345789999999999998
No 15
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=44.77 E-value=33 Score=28.42 Aligned_cols=102 Identities=12% Similarity=0.077 Sum_probs=55.0
Q ss_pred CCeEEEEEeecCCccHHHHHHHHHHHHhcC-CC-CCEEEEECCCCCHHHHHHHHhCCCEEEE-ecccC-CCCchhhhhhh
Q 025063 14 PKRAYVTFLAGNGDYVKGVVGLAKGLRKAK-SE-YPLVVAILPDVPEDHRQILESQGCIVRE-IEPVY-PPENQTEFAMA 89 (258)
Q Consensus 14 ~~~a~vt~l~~d~~y~~~~~vl~~Sl~~~~-~~-~~~~vl~~~~~~~~~~~~L~~~~~~i~~-v~~~~-~~~~~~~~~~~ 89 (258)
.+..+|. -+-|+. ..+..++.||.... +. ..+ ++++++-++++.+.+++.+..+.. +..+. ...+. .....
T Consensus 48 ~~vSViI-p~yN~~--~~l~~~l~sl~~q~~~~~~ei-ivVDdgS~D~t~~~~~~~~~~~~~~~~~~~~~~~n~-G~~~a 122 (329)
T 3ckj_A 48 RTISVVL-PALDEE--DTIGSVIDSISPLVDGLVDEL-IVLDSGSTDDTEIRAVAAGARVVSREQALPEVPIRP-GKGEA 122 (329)
T ss_dssp CCEEEEE-EESSCT--TTHHHHHHHHGGGBTTTBSEE-EEEECSCCSSHHHHHHHTTCEEEEHHHHCTTSCCCC-SHHHH
T ss_pred CcEEEEE-eeCCCH--HHHHHHHHHHHHhhCCCCcEE-EEEeCCCCchHHHHHHHhhhhhccceeeeccCCCCC-CHHHH
Confidence 4555553 223432 34566778887654 32 344 447777777788888888776432 22221 11221 11111
Q ss_pred hhhhceeeeeccccccccEEEEEeccee-cccC-chhhcC
Q 025063 90 YYVINYSKLRIWEFVEYEKMIYLDGDIQ-VFDN-IDHLFD 127 (258)
Q Consensus 90 ~~~~~~~Kl~l~~l~~ydrvlyLD~D~l-v~~~-l~~Lf~ 127 (258)
. -...+....|-|+++|+|.+ +..+ +..+.+
T Consensus 123 ~-------n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~ 155 (329)
T 3ckj_A 123 L-------WRSLAASRGDIVVFVDSDLINPHPMFVPWLVG 155 (329)
T ss_dssp H-------HHHHHHCCCSEEEECCTTEESCCTTHHHHHHH
T ss_pred H-------HHHHHhCCCCEEEEECCCCCCcChHHHHHHHH
Confidence 1 11112235689999999999 6543 566543
No 16
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=43.97 E-value=89 Score=28.25 Aligned_cols=99 Identities=13% Similarity=0.077 Sum_probs=50.6
Q ss_pred CeEEEEEeecCCccHHHHHHHHHHHHhcCCCCCE-EEEECCCCCHHHHHHHHhCCC--EEEEecccCCCCchhhhhhhhh
Q 025063 15 KRAYVTFLAGNGDYVKGVVGLAKGLRKAKSEYPL-VVAILPDVPEDHRQILESQGC--IVREIEPVYPPENQTEFAMAYY 91 (258)
Q Consensus 15 ~~a~vt~l~~d~~y~~~~~vl~~Sl~~~~~~~~~-~vl~~~~~~~~~~~~L~~~~~--~i~~v~~~~~~~~~~~~~~~~~ 91 (258)
+..++. .+-|. ...+..++.||.......++ +++++++-+++..+.+++... .+..+.. +.........
T Consensus 94 ~vsviI-p~~n~--~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~---~~~~~g~~~a-- 165 (625)
T 2z86_A 94 GLSIVI-PTYNR--AKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQ---KDYGYQLCAV-- 165 (625)
T ss_dssp CEEEEE-EESSC--HHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEE---CCCSCCHHHH--
T ss_pred cEEEEE-ecCCc--HHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcCCeEEEEe---CCCCcchhHH--
Confidence 444443 22343 46677888999876432233 344666666666677776521 2222221 1110001111
Q ss_pred hhceeeeeccccccccEEEEEecceecccC-chhhc
Q 025063 92 VINYSKLRIWEFVEYEKMIYLDGDIQVFDN-IDHLF 126 (258)
Q Consensus 92 ~~~~~Kl~l~~l~~ydrvlyLD~D~lv~~~-l~~Lf 126 (258)
+-........|-|+++|+|+++..+ +..+.
T Consensus 166 -----~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~ 196 (625)
T 2z86_A 166 -----RNLGLRAAKYNYVAILDCDMAPNPLWVQSYM 196 (625)
T ss_dssp -----HHHHHHHCCSSEEEEECTTEEECTTHHHHHH
T ss_pred -----HHHHHHhCCcCEEEEECCCCCCCHHHHHHHH
Confidence 1111122367899999999999754 44444
No 17
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=40.78 E-value=12 Score=32.72 Aligned_cols=88 Identities=13% Similarity=0.080 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHhcCCC-CCE-EEEECCCCCH-HHHHHHHhC---CC-EEEEecccCCCCchhhhhhhhhhhceeeeeccc
Q 025063 30 KGVVGLAKGLRKAKSE-YPL-VVAILPDVPE-DHRQILESQ---GC-IVREIEPVYPPENQTEFAMAYYVINYSKLRIWE 102 (258)
Q Consensus 30 ~~~~vl~~Sl~~~~~~-~~~-~vl~~~~~~~-~~~~~L~~~---~~-~i~~v~~~~~~~~~~~~~~~~~~~~~~Kl~l~~ 102 (258)
..+..++.||.+.... .++ +|+++++-++ +..+.|++. .. .+.-+. .+++. .+... +-...+
T Consensus 43 ~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~---~~~n~-G~~~a-------~N~g~~ 111 (472)
T 1xhb_A 43 STLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIR---MEQRS-GLIRA-------RLKGAA 111 (472)
T ss_dssp HHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEE---CSSCC-CHHHH-------HHHHHH
T ss_pred HHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEE---CCCCC-ChHHH-------HHHHHH
Confidence 5566778898876532 212 3446655444 354445432 11 232221 11111 12211 111112
Q ss_pred cccccEEEEEecceecccC-chhhcCC
Q 025063 103 FVEYEKMIYLDGDIQVFDN-IDHLFDA 128 (258)
Q Consensus 103 l~~ydrvlyLD~D~lv~~~-l~~Lf~~ 128 (258)
....|-|++||+|+.+..+ |..|.+.
T Consensus 112 ~A~gd~i~flD~D~~~~p~~L~~ll~~ 138 (472)
T 1xhb_A 112 VSRGQVITFLDAHCECTAGWLEPLLAR 138 (472)
T ss_dssp HCCSSEEEEEESSEEECTTCHHHHHHH
T ss_pred hccCCeEEEECCCeEeCccHHHHHHHH
Confidence 2346889999999998754 5555543
No 18
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=29.13 E-value=48 Score=29.21 Aligned_cols=24 Identities=13% Similarity=0.414 Sum_probs=17.9
Q ss_pred cccEEEEEecceecccC-chhhcCC
Q 025063 105 EYEKMIYLDGDIQVFDN-IDHLFDA 128 (258)
Q Consensus 105 ~ydrvlyLD~D~lv~~~-l~~Lf~~ 128 (258)
..|-|++||+|+.+..+ |..|.+.
T Consensus 146 ~gd~i~flD~D~~~~p~~L~~ll~~ 170 (501)
T 2ffu_A 146 QAKVLTFLDSHCECNEHWLEPLLER 170 (501)
T ss_dssp CSSEEEECCSSEEECTTCHHHHHHH
T ss_pred CCCEEEEECCCcccCccHHHHHHHH
Confidence 56889999999998744 5555543
No 19
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=28.88 E-value=75 Score=28.73 Aligned_cols=98 Identities=17% Similarity=0.071 Sum_probs=48.3
Q ss_pred CCCeEEEEEeecCCccHHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhC---CCEEEEecccCCCCchhhhhh
Q 025063 13 VPKRAYVTFLAGNGDYVKGVVGLAKGLRKAK-SEYPLVVAILPDVPEDHRQILESQ---GCIVREIEPVYPPENQTEFAM 88 (258)
Q Consensus 13 ~~~~a~vt~l~~d~~y~~~~~vl~~Sl~~~~-~~~~~~vl~~~~~~~~~~~~L~~~---~~~i~~v~~~~~~~~~~~~~~ 88 (258)
..++++++. +-|. ...+..++.|+.... +++.+ ++++++-++...+.+++. ...+.-+.. ++. .+..
T Consensus 374 ~~~vsiii~-~yn~--~~~l~~~l~s~~~q~~~~~ei-ivvdd~S~d~t~~~~~~~~~~~~~i~~~~~----~n~-G~~~ 444 (625)
T 2z86_A 374 VPLVSIYIP-AYNC--SKYIVRCVESALNQTITDLEV-CICDDGSTDDTLRILQEHYANHPRVRFISQ----KNK-GIGS 444 (625)
T ss_dssp SCSEEEEEE-ESSC--TTTHHHHHHHHHSSSCCSEEE-EEEEESCSSSHHHHHHHHHTTCTTEEEEEE----CCC-CHHH
T ss_pred CCeEEEEEe-CCCC--HHHHHHHHHHHHhCcCCCeEE-EEEECcCChhHHHHHHHHHhhCCcEEEEeC----CCC-CHHH
Confidence 345666642 2333 244566678887643 33343 446666666566656543 222222221 111 1111
Q ss_pred hhhhhceeeeeccccccccEEEEEecceecccC-chhhc
Q 025063 89 AYYVINYSKLRIWEFVEYEKMIYLDGDIQVFDN-IDHLF 126 (258)
Q Consensus 89 ~~~~~~~~Kl~l~~l~~ydrvlyLD~D~lv~~~-l~~Lf 126 (258)
.+ -...+....|-|++||+|.++..+ |..+.
T Consensus 445 a~-------n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~ 476 (625)
T 2z86_A 445 AS-------NTAVRLCRGFYIGQLDSDDFLEPDAVELCL 476 (625)
T ss_dssp HH-------HHHHHHCCSSEEEECCTTCEECTTHHHHHH
T ss_pred HH-------HHHHHhcCCCEEEEECCCcccChhHHHHHH
Confidence 11 011112245789999999998755 44444
No 20
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=22.66 E-value=67 Score=29.72 Aligned_cols=105 Identities=12% Similarity=0.085 Sum_probs=50.4
Q ss_pred CCCCeEEEEEeecCCccHHHHHHHHHHHHhcCC--CCC-EEEEECCCCCH-----HHHHHHHhCCCEEEEecccCCCCch
Q 025063 12 NVPKRAYVTFLAGNGDYVKGVVGLAKGLRKAKS--EYP-LVVAILPDVPE-----DHRQILESQGCIVREIEPVYPPENQ 83 (258)
Q Consensus 12 ~~~~~a~vt~l~~d~~y~~~~~vl~~Sl~~~~~--~~~-~~vl~~~~~~~-----~~~~~L~~~~~~i~~v~~~~~~~~~ 83 (258)
...+.++|. . .-|-...+..++.||.+... +.. -+|+++++-++ +..+.++..+..+.-|.. + +.
T Consensus 178 ~~pkVSVVI-p--tYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~~I~vI~~---~-N~ 250 (657)
T 4fix_A 178 GTANIAVGI-P--TFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQ---P-NL 250 (657)
T ss_dssp SCCCEEEEC-C--BSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGGGEEEEEC---C-CC
T ss_pred CCCeEEEEE-E--ecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCCCEEEEEC---C-CC
Confidence 345666663 2 34445677788889876431 112 23446655432 223444433333332321 1 21
Q ss_pred hhhhhhhhhhceeeeeccccccccEEEEEecceecccC-chhhcC
Q 025063 84 TEFAMAYYVINYSKLRIWEFVEYEKMIYLDGDIQVFDN-IDHLFD 127 (258)
Q Consensus 84 ~~~~~~~~~~~~~Kl~l~~l~~ydrvlyLD~D~lv~~~-l~~Lf~ 127 (258)
.++..+... .+. +-...++|-|++||+|+++..+ |..|.+
T Consensus 251 -G~a~a~N~G--l~~-A~g~~~~dyIlfLD~D~~~~pd~L~~ll~ 291 (657)
T 4fix_A 251 -GGSGGYSRV--MYE-ALKNTDCQQILFMDDDIRLEPDSILRVLA 291 (657)
T ss_dssp -HHHHHHHHH--HHH-HHHHCCCSEEEEECSSEEECTHHHHHHHH
T ss_pred -CHHHHHHHH--HHH-HHhcCCCCEEEEECCCCccChhHHHHHHH
Confidence 122111100 000 0011257999999999999854 555544
Done!