BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 025071
         (258 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O69492|Y2584_MYCLE Uncharacterized methyltransferase ML2584 OS=Mycobacterium leprae
           (strain TN) GN=ML2584 PE=3 SV=1
          Length = 269

 Score = 38.9 bits (89), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 7/78 (8%)

Query: 131 AALKLVGVS------DSIGIDLVPRPPLVIKGDFHAQPFDNGTFDFEFS-NVFDHALYPW 183
           A ++ +GV        + G  LVP+    ++    A PF +   D   S NV +H   PW
Sbjct: 93  AGVRYIGVEPDPREMHAAGPALVPKAGAFVRASGMALPFADDAVDICLSSNVAEHVPQPW 152

Query: 184 KFVGEIERTLKPAGVCVL 201
           +   E+ R  KP G+ VL
Sbjct: 153 QLGNEMLRVTKPGGLVVL 170


>sp|B8ZTF7|Y2584_MYCLB Uncharacterized methyltransferase MLBr02584 OS=Mycobacterium leprae
           (strain Br4923) GN=MLBr02584 PE=3 SV=1
          Length = 269

 Score = 38.9 bits (89), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 7/78 (8%)

Query: 131 AALKLVGVS------DSIGIDLVPRPPLVIKGDFHAQPFDNGTFDFEFS-NVFDHALYPW 183
           A ++ +GV        + G  LVP+    ++    A PF +   D   S NV +H   PW
Sbjct: 93  AGVRYIGVEPDPREMHAAGPALVPKAGAFVRASGMALPFADDAVDICLSSNVAEHVPQPW 152

Query: 184 KFVGEIERTLKPAGVCVL 201
           +   E+ R  KP G+ VL
Sbjct: 153 QLGNEMLRVTKPGGLVVL 170


>sp|O14321|ERG6_SCHPO Sterol 24-C-methyltransferase erg6 OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=erg6 PE=2 SV=1
          Length = 378

 Score = 37.7 bits (86), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 32/130 (24%)

Query: 100 FSRFFQD-------LKQRHFLFNE------SKALSIGARVG------QEVAALKLVGVSD 140
           FSRF++         +  H+L         S+ L +G  VG       E     LVG+++
Sbjct: 96  FSRFYKGEAFAQSIARHEHYLAYRMGIKPGSRVLDVGCGVGGPAREITEFTGCNLVGLNN 155

Query: 141 -----------SIGIDLVPRPPLVIKGDFHAQPFDNGTFDFEFS-NVFDHALYPWKFVGE 188
                      ++  +L  +  + +KGDF   PF++ TFD+ ++     HA       GE
Sbjct: 156 NDYQISRCNNYAVKRNL-DKKQVFVKGDFMHMPFEDNTFDYVYAIEATVHAPSLEGVYGE 214

Query: 189 IERTLKPAGV 198
           I R LKP GV
Sbjct: 215 IFRVLKPGGV 224


>sp|A5TYU9|Y232_MYCTA Uncharacterized methyltransferase MRA_0232 OS=Mycobacterium
           tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_0232
           PE=3 SV=1
          Length = 254

 Score = 37.4 bits (85), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 149 RPPLVIKGDFHAQPFDNGTFDFEFS-NVFDHALYPWKFVGEIERTLKPAGVCVL 201
           RP + ++    A PF + + D   S NV +H   PW+   E+ R  KP G+ VL
Sbjct: 103 RPGMFVRASGMALPFADDSVDICLSSNVAEHVPRPWQLGTEMLRVTKPGGLVVL 156


>sp|P96406|Y224_MYCTU Uncharacterized methyltransferase Rv0224c/MT0234 OS=Mycobacterium
           tuberculosis GN=Rv0224c PE=3 SV=2
          Length = 254

 Score = 37.4 bits (85), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 149 RPPLVIKGDFHAQPFDNGTFDFEFS-NVFDHALYPWKFVGEIERTLKPAGVCVL 201
           RP + ++    A PF + + D   S NV +H   PW+   E+ R  KP G+ VL
Sbjct: 103 RPGMFVRASGMALPFADDSVDICLSSNVAEHVPRPWQLGTEMLRVTKPGGLVVL 156


>sp|A4T3V1|Y427_MYCGI Uncharacterized methyltransferase Mflv_0427 OS=Mycobacterium gilvum
           (strain PYR-GCK) GN=Mflv_0427 PE=3 SV=1
          Length = 255

 Score = 37.0 bits (84), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 154 IKGDFHAQPFDNGTFDFEFS-NVFDHALYPWKFVGEIERTLKPAGVCVL 201
           ++    A PF +G+ D   S NV +H   PW+   E+ R  +P G+ VL
Sbjct: 108 VRASGTALPFADGSVDICLSSNVAEHVAQPWRLGEEMLRVTRPGGLAVL 156


>sp|A1KF44|Y261_MYCBP Uncharacterized methyltransferase BCG_0261c OS=Mycobacterium bovis
           (strain BCG / Pasteur 1173P2) GN=BCG_0261c PE=3 SV=1
          Length = 254

 Score = 35.4 bits (80), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 149 RPPLVIKGDFHAQPFDNGTFDFEFS-NVFDHALYPWKFVGEIERTLKPAGVCVL 201
           RP + ++    A P  + + D   S NV +H   PW+   E+ R  KP G+ VL
Sbjct: 103 RPGMFVRASGMALPLADDSVDICLSSNVAEHVPRPWQLGTEMLRVTKPGGLVVL 156


>sp|Q7U2J0|Y229_MYCBO Uncharacterized methyltransferase Mb0229c OS=Mycobacterium bovis
           (strain ATCC BAA-935 / AF2122/97) GN=Mb0229c PE=1 SV=1
          Length = 254

 Score = 35.4 bits (80), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 149 RPPLVIKGDFHAQPFDNGTFDFEFS-NVFDHALYPWKFVGEIERTLKPAGVCVL 201
           RP + ++    A P  + + D   S NV +H   PW+   E+ R  KP G+ VL
Sbjct: 103 RPGMFVRASGMALPLADDSVDICLSSNVAEHVPRPWQLGTEMLRVTKPGGLVVL 156


>sp|A1T1P0|Y241_MYCVP Uncharacterized methyltransferase Mvan_0241 OS=Mycobacterium
           vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_0241 PE=3
           SV=1
          Length = 255

 Score = 35.0 bits (79), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 18/104 (17%)

Query: 115 NESKA----LSIGARVGQEVAALKLVGVSDSIGIDLVPR------------PPLVIKGDF 158
            ES+A    L +G   G   +A    GV + IG++  PR                ++   
Sbjct: 54  GESQAGLTLLDVGGGPGYFASAFTAAGV-NYIGVEPDPREMHAAAALTHERAGTFVRASG 112

Query: 159 HAQPFDNGTFDFEFS-NVFDHALYPWKFVGEIERTLKPAGVCVL 201
            A PF + + D   S NV +H   PW+   E+ R  +P G+ VL
Sbjct: 113 TALPFADDSVDVCLSSNVAEHVAQPWRLGDEMLRVTRPGGLAVL 156


>sp|A1U9D7|Y228_MYCSK Uncharacterized methyltransferase Mkms_0228 OS=Mycobacterium sp.
           (strain KMS) GN=Mkms_0228 PE=3 SV=1
          Length = 252

 Score = 34.7 bits (78), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 12/93 (12%)

Query: 120 LSIGARVGQEVAALKLVGVSDSIGIDLVPR-----PPLVIKGDF-----HAQPFDNGTFD 169
           L +G   G   AA    G+ + +G++  PR     P   + G +      + PF +G+ D
Sbjct: 63  LDVGGGPGFFAAAFTRRGM-EYVGVEPDPREMHAGPAAQVGGRYVRASGTSLPFADGSVD 121

Query: 170 FEFS-NVFDHALYPWKFVGEIERTLKPAGVCVL 201
              S NV +H   PW+   E+ R  +P G+ VL
Sbjct: 122 VCLSSNVAEHVPDPWRLGNEMLRVTRPGGLAVL 154


>sp|Q1BFJ5|Y218_MYCSS Uncharacterized methyltransferase Mmcs_0218 OS=Mycobacterium sp.
           (strain MCS) GN=Mmcs_0218 PE=3 SV=1
          Length = 252

 Score = 34.7 bits (78), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 12/93 (12%)

Query: 120 LSIGARVGQEVAALKLVGVSDSIGIDLVPR-----PPLVIKGDF-----HAQPFDNGTFD 169
           L +G   G   AA    G+ + +G++  PR     P   + G +      + PF +G+ D
Sbjct: 63  LDVGGGPGFFAAAFTRRGM-EYVGVEPDPREMHAGPAAQVGGRYVRASGTSLPFADGSVD 121

Query: 170 FEFS-NVFDHALYPWKFVGEIERTLKPAGVCVL 201
              S NV +H   PW+   E+ R  +P G+ VL
Sbjct: 122 VCLSSNVAEHVPDPWRLGNEMLRVTRPGGLAVL 154


>sp|A3PSZ4|Y208_MYCSJ Uncharacterized methyltransferase Mjls_0208 OS=Mycobacterium sp.
           (strain JLS) GN=Mjls_0208 PE=3 SV=1
          Length = 252

 Score = 34.7 bits (78), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 162 PFDNGTFDFEFS-NVFDHALYPWKFVGEIERTLKPAGVCVL 201
           PF +G+ D   S NV +H   PW+   E+ R  +P G+ VL
Sbjct: 114 PFADGSVDVCLSSNVAEHVPDPWRLGNEMVRVTRPGGLAVL 154


>sp|A5GD93|DAPAT_GEOUR LL-diaminopimelate aminotransferase OS=Geobacter uraniireducens
           (strain Rf4) GN=dapL PE=3 SV=1
          Length = 410

 Score = 34.3 bits (77), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 8/91 (8%)

Query: 142 IGIDLVPRP--PLVIKGDFHAQPFDNGTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVC 199
           +GI  V RP  P V+K  FHA   D GT D  F+       Y W     IE++ KP GV 
Sbjct: 39  LGIGDVTRPLAPAVLKA-FHAAVDDLGTTD-NFAGYGPEQGYDWLINAIIEKSYKPLGVS 96

Query: 200 V----LHVALSRRADKYSANDLFSVKPLVKL 226
           +    + ++   + D  +  D+F++  +V +
Sbjct: 97  LKTDEMFISDGSKCDCANILDIFALDNVVAI 127


>sp|Q9A7V4|RLME_CAUCR Ribosomal RNA large subunit methyltransferase E OS=Caulobacter
           crescentus (strain ATCC 19089 / CB15) GN=rlmE PE=3 SV=1
          Length = 226

 Score = 34.3 bits (77), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 11/111 (9%)

Query: 47  PKKSSAGGESNDLRIRPGYA---SYETYIQHQLNKTLNPKLRAV-WTTRDWERKVRVFSR 102
           P   + GG     R++  Y    S + +++ Q+N   + K RA+ + +R   +   +  +
Sbjct: 5   PAGGNEGGRGKPARLKTAYGRTPSQQAWLERQINDPFSAKARALGYRSRAAFKISEIDDK 64

Query: 103 FFQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRPPLV 153
           F       HF    +K + +G   G  +      GV+   GIDL+P  P+ 
Sbjct: 65  F-------HFFSKGAKVIDLGCAPGGWLQIAVERGVTTLAGIDLLPVDPVA 108


>sp|B0T8J6|RLME_CAUSK Ribosomal RNA large subunit methyltransferase E OS=Caulobacter sp.
           (strain K31) GN=rlmE PE=3 SV=2
          Length = 226

 Score = 34.3 bits (77), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 9/110 (8%)

Query: 47  PKKSSAGGESNDLRIRPGYA---SYETYIQHQLNKTLNPKLRAVWTTRDWERKVRVFSRF 103
           P   + GG +   R++  +    S + +++ Q+N   + K RA+       R    F   
Sbjct: 5   PAGGNDGGRAKPARLKTAFGRTPSQQAWLERQINDPFSAKARALGY-----RSRAAFKIS 59

Query: 104 FQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRPPLV 153
             D K R F    +K + +G   G  +      GV+D +G+DL+P  P+ 
Sbjct: 60  EIDDKYR-FFKKGAKVIDLGCAPGGWLQMATERGVTDIVGVDLLPVDPVA 108


>sp|B2HMZ9|Y473_MYCMM Uncharacterized methyltransferase MMAR_0473 OS=Mycobacterium
           marinum (strain ATCC BAA-535 / M) GN=MMAR_0473 PE=3 SV=1
          Length = 255

 Score = 33.9 bits (76), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 14/95 (14%)

Query: 120 LSIGARVGQEVAALKLVGVSDSIGIDLVPR------------PPLVIKGDFHAQPFDNGT 167
           L +G   G   +A    GV   IG++  P             P   ++    A PF + +
Sbjct: 63  LDVGGGPGYFASAFAAAGVG-YIGVEPDPNEMHAAGPAHAGGPGSFVRASGMALPFADDS 121

Query: 168 FDFEFS-NVFDHALYPWKFVGEIERTLKPAGVCVL 201
            D   S NV +H   PW+   E+ R  +P G+ VL
Sbjct: 122 VDICLSSNVAEHVPRPWQLGAEMLRVTRPGGLAVL 156


>sp|O82427|SMT2_ORYSJ 24-methylenesterol C-methyltransferase 2 OS=Oryza sativa subsp.
           japonica GN=Smt2-1 PE=2 SV=2
          Length = 363

 Score = 33.9 bits (76), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 3/88 (3%)

Query: 153 VIKGDFHAQPFDNGTFDFEFS-NVFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADK 211
           V+ G+F + PF + +FD  +S     HA       GE+ R LKP G+ V +  ++     
Sbjct: 182 VVCGNFLSMPFSDASFDGAYSIEATCHAPRLQDVYGEVFRVLKPGGLYVSYEWVT--TSL 239

Query: 212 YSANDLFSVKPLVKLFRESELVAVRKVD 239
           Y A++   V+ +  + R   L  +R+ D
Sbjct: 240 YRADNPEHVEAIHGIERGDALPGLRRQD 267


>sp|Q39227|SMT2_ARATH 24-methylenesterol C-methyltransferase 2 OS=Arabidopsis thaliana
           GN=SMT2 PE=1 SV=2
          Length = 361

 Score = 33.5 bits (75), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 19/136 (13%)

Query: 118 KALSIGARVGQEVAALKLVGVSDSIGIDL----VPRPPL------------VIKGDFHAQ 161
           K L +G  VG  + A+     ++ +GI +    V R  L            V+ G+F   
Sbjct: 126 KILDVGCGVGGPMRAIASHSRANVVGITINEYQVNRARLHNKKAGLDALCEVVCGNFLQM 185

Query: 162 PFDNGTFDFEFS-NVFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSV 220
           PFD+ +FD  +S     HA    +   EI R LKP  + V +  ++   +K+ A D   V
Sbjct: 186 PFDDNSFDGAYSIEATCHAPKLEEVYAEIYRVLKPGSMYVSYEWVT--TEKFKAEDDEHV 243

Query: 221 KPLVKLFRESELVAVR 236
           + +  + R   L  +R
Sbjct: 244 EVIQGIERGDALPGLR 259


>sp|Q9CD86|PHMT_MYCLE Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase
           OS=Mycobacterium leprae (strain TN) GN=ML0130 PE=3 SV=1
          Length = 270

 Score = 33.1 bits (74), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 154 IKGDFHAQPFDNGTFD----FEFSNVFDHALYPWKFVGEIERTLKPAG 197
           ++GD    PFDN +FD     E S+ + H  +P +F+ E+ R L+P G
Sbjct: 132 VRGDAENLPFDNESFDVVINIEASHCYPH--FP-RFLAEVVRVLRPGG 176


>sp|Q3TIU4|PDE12_MOUSE 2',5'-phosphodiesterase 12 OS=Mus musculus GN=Pde12 PE=2 SV=2
          Length = 608

 Score = 32.7 bits (73), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 126 VGQEVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFDNGTFDFEFSNVFDHALYPWKF 185
           +  EVA + +  VS     DL P  P++  GDF++ P   G + F  S         W  
Sbjct: 468 IQMEVALVHIRHVSR----DLYPGIPVIFCGDFNSTP-STGMYHFVISGSIAEDHEDWAS 522

Query: 186 VGEIERTLKPAGVC 199
            GE ER   P   C
Sbjct: 523 NGEEERCSMPLSHC 536


>sp|P05531|XLR_MOUSE X-linked lymphocyte-regulated protein PM1 OS=Mus musculus GN=Xlr
           PE=2 SV=1
          Length = 208

 Score = 32.7 bits (73), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 18/116 (15%)

Query: 44  TPSPKKSSAGGESNDL--RIRPGYASYETYIQHQLNKTLNPKLRAVWTTRDWERK----- 96
           T SP ++  G    D+  R+       ETYI+    K  N KL  +W T   ERK     
Sbjct: 44  TRSPVQNILGKFEGDINKRLHIKRKRMETYIKDSF-KDSNVKLEQLWKTNKQERKKINNK 102

Query: 97  -----VRVFSRFFQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLV 147
                +  F +F  D+++    FNE +  S+     +E  ALKL   S S  ++ +
Sbjct: 103 FCEQYITTFQKFDMDVQK----FNEEQEKSVN-NYQKEQQALKLSKCSQSQTLEAI 153


>sp|B3E933|DAPAT_GEOLS LL-diaminopimelate aminotransferase OS=Geobacter lovleyi (strain
           ATCC BAA-1151 / DSM 17278 / SZ) GN=dapL PE=3 SV=1
          Length = 410

 Score = 32.0 bits (71), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 8/91 (8%)

Query: 142 IGIDLVPRP--PLVIKGDFHAQPFDNGTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVC 199
           +GI  V RP  P V+K  FHA   D  T D +F+       Y W     IE++ KP GV 
Sbjct: 39  LGIGDVTRPLAPTVLKA-FHAAVDDLATTD-QFAGYGPEQGYDWLINAIIEKSYKPLGVD 96

Query: 200 V----LHVALSRRADKYSANDLFSVKPLVKL 226
           +    + ++   + D  +  D+F++  +V +
Sbjct: 97  LKTEEMFISDGSKCDCANILDIFALDNVVAI 127


>sp|Q9ZSK1|GTOMC_ARATH Tocopherol O-methyltransferase, chloroplastic OS=Arabidopsis
           thaliana GN=VTE4 PE=2 SV=2
          Length = 348

 Score = 31.6 bits (70), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 6/86 (6%)

Query: 122 IGARVGQEVAALKLVGVSDSIGIDLVPRPPLVIKGDFHA-----QPFDNGTFDFEFS-NV 175
           + ++ G E   + L  V      DL     L  K  F       QPF++G FD  +S   
Sbjct: 144 LASKFGAECIGITLSPVQAKRANDLAAAQSLAHKASFQVADALDQPFEDGKFDLVWSMES 203

Query: 176 FDHALYPWKFVGEIERTLKPAGVCVL 201
            +H     KFV E+ R   P G  ++
Sbjct: 204 GEHMPDKAKFVKELVRVAAPGGRIII 229


>sp|H2E7T9|SMTL2_BOTBR Sterol methyltransferase-like 2 OS=Botryococcus braunii GN=SMT-2
           PE=2 SV=1
          Length = 389

 Score = 31.2 bits (69), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 154 IKGDFHAQPFDNGTFDFEFS-NVFDHALYPWKFVGEIERTLKPAGVCVLHVALS 206
           ++GDF   PF + TFD  F+     HA    +  GEI R LKP     ++ A++
Sbjct: 207 VQGDFTDMPFADKTFDAAFAIEATCHAPKLEQVYGEIFRVLKPGAFFAVYEAVT 260


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.139    0.421 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,736,639
Number of Sequences: 539616
Number of extensions: 4205527
Number of successful extensions: 9407
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 9403
Number of HSP's gapped (non-prelim): 33
length of query: 258
length of database: 191,569,459
effective HSP length: 115
effective length of query: 143
effective length of database: 129,513,619
effective search space: 18520447517
effective search space used: 18520447517
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)