Query 025071
Match_columns 258
No_of_seqs 261 out of 2207
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 03:10:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025071.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025071hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dh0_A SAM dependent methyltra 99.8 5.7E-19 1.9E-23 149.8 14.9 143 112-254 34-195 (219)
2 3bus_A REBM, methyltransferase 99.8 1.1E-18 3.6E-23 153.1 14.2 170 61-236 9-212 (273)
3 1vl5_A Unknown conserved prote 99.8 1.1E-18 3.9E-23 152.4 13.7 122 112-234 34-184 (260)
4 3ujc_A Phosphoethanolamine N-m 99.8 5.5E-19 1.9E-23 153.3 11.6 133 104-237 44-203 (266)
5 2p7i_A Hypothetical protein; p 99.8 8.2E-19 2.8E-23 150.0 11.6 121 114-236 41-195 (250)
6 4htf_A S-adenosylmethionine-de 99.8 2.7E-18 9.1E-23 152.2 14.9 121 114-235 67-227 (285)
7 2zfu_A Nucleomethylin, cerebra 99.8 1.6E-17 5.5E-22 140.9 19.0 129 113-255 65-194 (215)
8 3h2b_A SAM-dependent methyltra 99.8 6.2E-18 2.1E-22 142.1 15.2 122 116-238 42-180 (203)
9 1pjz_A Thiopurine S-methyltran 99.8 1.9E-18 6.6E-23 147.3 12.3 120 112-233 19-169 (203)
10 1nkv_A Hypothetical protein YJ 99.8 4E-18 1.4E-22 147.8 13.8 131 105-236 26-183 (256)
11 3i9f_A Putative type 11 methyl 99.8 4.1E-18 1.4E-22 139.3 13.0 137 113-255 15-163 (170)
12 4hg2_A Methyltransferase type 99.8 1.4E-18 4.7E-23 154.9 11.0 88 114-203 38-135 (257)
13 3hnr_A Probable methyltransfer 99.8 4.3E-18 1.5E-22 144.4 13.6 138 114-254 44-214 (220)
14 2o57_A Putative sarcosine dime 99.8 4.9E-18 1.7E-22 151.1 13.8 125 112-237 79-231 (297)
15 3ccf_A Cyclopropane-fatty-acyl 99.8 1.5E-18 5.1E-23 153.6 10.2 123 112-236 54-206 (279)
16 1xxl_A YCGJ protein; structura 99.8 1.3E-17 4.4E-22 144.6 15.0 125 111-236 17-170 (239)
17 3l8d_A Methyltransferase; stru 99.8 1.5E-17 5.3E-22 142.7 14.8 124 113-237 51-197 (242)
18 3g5l_A Putative S-adenosylmeth 99.7 1.3E-17 4.5E-22 144.8 14.2 125 114-238 43-214 (253)
19 3pfg_A N-methyltransferase; N, 99.7 3.5E-17 1.2E-21 143.1 16.7 142 113-256 48-253 (263)
20 3f4k_A Putative methyltransfer 99.7 3.6E-17 1.2E-21 141.9 15.4 126 112-238 43-194 (257)
21 3kkz_A Uncharacterized protein 99.7 2.4E-17 8.2E-22 144.7 14.1 125 113-238 44-194 (267)
22 2gs9_A Hypothetical protein TT 99.7 3.3E-17 1.1E-21 138.4 14.1 112 114-228 35-170 (211)
23 3dlc_A Putative S-adenosyl-L-m 99.7 5E-18 1.7E-22 142.7 8.9 140 112-253 41-215 (219)
24 4gek_A TRNA (CMO5U34)-methyltr 99.7 2.9E-17 9.8E-22 146.5 13.9 141 112-255 67-260 (261)
25 3vc1_A Geranyl diphosphate 2-C 99.7 3.5E-17 1.2E-21 147.6 14.2 123 113-237 115-266 (312)
26 3dli_A Methyltransferase; PSI- 99.7 1.3E-17 4.5E-22 144.2 10.7 123 113-236 39-180 (240)
27 3jwg_A HEN1, methyltransferase 99.7 5.9E-17 2E-21 137.8 14.6 137 114-251 28-209 (219)
28 3ege_A Putative methyltransfer 99.7 3.4E-17 1.2E-21 143.9 13.2 122 112-236 31-174 (261)
29 3dtn_A Putative methyltransfer 99.7 8.3E-17 2.8E-21 138.0 15.2 125 113-238 42-212 (234)
30 2p35_A Trans-aconitate 2-methy 99.7 2.2E-17 7.4E-22 143.2 11.3 128 105-233 23-183 (259)
31 1xtp_A LMAJ004091AAA; SGPP, st 99.7 1.7E-17 5.9E-22 143.4 10.1 133 106-238 84-236 (254)
32 3e23_A Uncharacterized protein 99.7 2.1E-17 7.2E-22 139.8 10.2 123 112-236 40-178 (211)
33 3ou2_A SAM-dependent methyltra 99.7 2.1E-16 7.1E-21 133.1 16.3 119 113-233 44-198 (218)
34 2xvm_A Tellurite resistance pr 99.7 1.5E-16 5.1E-21 132.2 14.9 122 113-236 30-171 (199)
35 3mgg_A Methyltransferase; NYSG 99.7 3.7E-17 1.3E-21 143.7 11.7 126 111-236 33-194 (276)
36 3sm3_A SAM-dependent methyltra 99.7 4.6E-17 1.6E-21 138.4 11.0 123 113-236 28-203 (235)
37 4e2x_A TCAB9; kijanose, tetron 99.7 4.8E-17 1.6E-21 152.2 12.1 134 102-236 94-249 (416)
38 3ocj_A Putative exported prote 99.7 7E-17 2.4E-21 145.1 12.6 139 113-252 116-304 (305)
39 3bkw_A MLL3908 protein, S-aden 99.7 9.3E-17 3.2E-21 137.7 12.6 124 114-237 42-211 (243)
40 2gb4_A Thiopurine S-methyltran 99.7 1.7E-16 5.7E-21 140.8 14.1 123 114-238 67-227 (252)
41 1y8c_A S-adenosylmethionine-de 99.7 1.3E-16 4.4E-21 136.6 12.7 123 114-238 36-223 (246)
42 3cc8_A Putative methyltransfer 99.7 3.9E-16 1.3E-20 132.0 15.3 122 114-236 31-181 (230)
43 1ri5_A MRNA capping enzyme; me 99.7 5.6E-17 1.9E-21 143.1 10.4 94 112-205 61-176 (298)
44 1kpg_A CFA synthase;, cyclopro 99.7 2.9E-16 9.9E-21 138.9 14.3 131 103-237 52-225 (287)
45 2ex4_A Adrenal gland protein A 99.7 1.3E-16 4.5E-21 137.9 11.5 124 115-238 79-223 (241)
46 2yqz_A Hypothetical protein TT 99.7 1.6E-16 5.4E-21 137.8 11.8 121 112-233 36-189 (263)
47 3bxo_A N,N-dimethyltransferase 99.7 4.9E-16 1.7E-20 132.8 14.5 136 114-252 39-239 (239)
48 3hem_A Cyclopropane-fatty-acyl 99.7 5.3E-16 1.8E-20 138.8 14.9 130 103-236 60-239 (302)
49 2p8j_A S-adenosylmethionine-de 99.7 2.6E-16 8.8E-21 132.2 11.7 123 113-236 21-179 (209)
50 3e8s_A Putative SAM dependent 99.7 8.7E-16 3E-20 129.5 14.9 123 114-238 51-207 (227)
51 3ofk_A Nodulation protein S; N 99.7 1.5E-15 5.3E-20 128.5 16.3 138 113-254 49-207 (216)
52 3cgg_A SAM-dependent methyltra 99.7 1.5E-15 5.1E-20 125.0 15.6 116 113-238 44-173 (195)
53 4fsd_A Arsenic methyltransfera 99.7 2.8E-16 9.7E-21 146.4 12.2 123 113-235 81-246 (383)
54 1vlm_A SAM-dependent methyltra 99.7 9.3E-16 3.2E-20 131.0 14.2 118 115-237 47-185 (219)
55 2avn_A Ubiquinone/menaquinone 99.7 6.3E-16 2.2E-20 135.5 13.4 91 114-205 53-154 (260)
56 3lcc_A Putative methyl chlorid 99.7 2.2E-15 7.6E-20 129.5 16.3 119 115-236 66-203 (235)
57 2a14_A Indolethylamine N-methy 99.7 6.3E-17 2.2E-21 142.9 6.6 123 113-235 53-233 (263)
58 3jwh_A HEN1; methyltransferase 99.7 1.5E-15 5.3E-20 129.0 14.7 121 114-234 28-186 (217)
59 3bkx_A SAM-dependent methyltra 99.7 2.7E-15 9.1E-20 131.5 16.0 132 106-237 34-216 (275)
60 3gu3_A Methyltransferase; alph 99.7 4.4E-16 1.5E-20 138.6 11.2 125 112-237 19-187 (284)
61 1ve3_A Hypothetical protein PH 99.6 3.2E-15 1.1E-19 126.8 15.0 92 113-205 36-144 (227)
62 2fk8_A Methoxy mycolic acid sy 99.6 1.1E-15 3.8E-20 137.5 12.7 130 103-236 78-250 (318)
63 2g72_A Phenylethanolamine N-me 99.6 1.2E-16 4E-21 142.3 5.8 121 115-235 71-251 (289)
64 3m70_A Tellurite resistance pr 99.6 1.2E-15 4.1E-20 135.1 11.7 120 115-236 120-258 (286)
65 3g5t_A Trans-aconitate 3-methy 99.6 8.5E-16 2.9E-20 137.3 10.2 88 114-202 35-148 (299)
66 2kw5_A SLR1183 protein; struct 99.6 2.5E-15 8.4E-20 126.0 12.4 123 113-238 28-171 (202)
67 2pxx_A Uncharacterized protein 99.6 5.3E-16 1.8E-20 130.1 7.9 92 113-204 40-160 (215)
68 3d2l_A SAM-dependent methyltra 99.6 3.9E-15 1.3E-19 127.5 13.5 89 113-204 31-138 (243)
69 2aot_A HMT, histamine N-methyl 99.6 1E-15 3.5E-20 136.7 9.7 123 114-236 51-217 (292)
70 3g2m_A PCZA361.24; SAM-depende 99.6 2.9E-15 9.8E-20 133.9 12.2 89 115-205 82-192 (299)
71 3thr_A Glycine N-methyltransfe 99.6 8.1E-16 2.8E-20 136.2 8.2 90 115-205 57-177 (293)
72 1wzn_A SAM-dependent methyltra 99.6 1.4E-14 4.9E-19 125.3 15.7 100 103-204 29-146 (252)
73 2i62_A Nicotinamide N-methyltr 99.6 2.5E-15 8.5E-20 130.4 9.4 121 114-236 55-235 (265)
74 3orh_A Guanidinoacetate N-meth 99.6 3.8E-16 1.3E-20 136.3 4.1 89 114-202 59-169 (236)
75 3mq2_A 16S rRNA methyltransfer 99.6 3E-15 1E-19 127.3 8.9 120 113-233 25-177 (218)
76 1fbn_A MJ fibrillarin homologu 99.6 1.3E-14 4.3E-19 125.3 12.8 134 113-253 72-229 (230)
77 3q87_B N6 adenine specific DNA 99.6 1.7E-14 5.8E-19 119.5 13.0 123 114-251 22-161 (170)
78 3evz_A Methyltransferase; NYSG 99.6 3.3E-14 1.1E-18 121.6 14.8 135 111-255 51-223 (230)
79 3m33_A Uncharacterized protein 99.6 5.6E-15 1.9E-19 127.0 9.8 104 113-234 46-161 (226)
80 3g07_A 7SK snRNA methylphospha 99.6 4.4E-15 1.5E-19 133.3 9.5 138 115-253 46-288 (292)
81 1zx0_A Guanidinoacetate N-meth 99.6 1.3E-15 4.4E-20 131.7 5.5 90 113-202 58-169 (236)
82 3ggd_A SAM-dependent methyltra 99.6 5.2E-15 1.8E-19 127.8 7.9 111 86-203 33-163 (245)
83 3dp7_A SAM-dependent methyltra 99.5 1E-13 3.5E-18 128.1 15.7 142 114-256 178-359 (363)
84 1ej0_A FTSJ; methyltransferase 99.5 5E-14 1.7E-18 113.4 11.8 93 112-204 19-137 (180)
85 3lst_A CALO1 methyltransferase 99.5 2.1E-13 7.3E-18 124.9 17.2 142 106-250 175-346 (348)
86 2vdw_A Vaccinia virus capping 99.5 1.1E-14 3.6E-19 132.4 8.2 90 115-204 48-170 (302)
87 2r3s_A Uncharacterized protein 99.5 1.6E-13 5.3E-18 123.9 15.8 125 114-239 164-322 (335)
88 2plw_A Ribosomal RNA methyltra 99.5 4.2E-14 1.4E-18 118.3 10.6 94 111-204 18-155 (201)
89 4dzr_A Protein-(glutamine-N5) 99.5 2.8E-14 9.7E-19 119.2 9.0 127 114-253 29-206 (215)
90 3uwp_A Histone-lysine N-methyl 99.5 1.2E-14 4E-19 138.4 7.3 100 103-202 161-287 (438)
91 3bgv_A MRNA CAP guanine-N7 met 99.5 1.7E-14 5.9E-19 129.8 7.6 92 114-205 33-157 (313)
92 3mti_A RRNA methylase; SAM-dep 99.5 3.9E-14 1.3E-18 117.2 9.1 92 112-204 19-136 (185)
93 3e05_A Precorrin-6Y C5,15-meth 99.5 3.1E-13 1.1E-17 113.8 14.7 108 112-232 37-160 (204)
94 1nt2_A Fibrillarin-like PRE-rR 99.5 4E-14 1.4E-18 121.7 9.1 90 113-204 55-162 (210)
95 2ip2_A Probable phenazine-spec 99.5 8.4E-13 2.9E-17 119.5 18.2 143 105-251 158-333 (334)
96 3fpf_A Mtnas, putative unchara 99.5 5.7E-13 2E-17 121.6 17.0 90 111-204 118-223 (298)
97 1xdz_A Methyltransferase GIDB; 99.5 8.2E-14 2.8E-18 121.0 10.9 130 114-255 69-222 (240)
98 3reo_A (ISO)eugenol O-methyltr 99.5 7.1E-13 2.4E-17 122.9 17.9 137 113-252 201-367 (368)
99 3grz_A L11 mtase, ribosomal pr 99.5 1E-13 3.4E-18 116.8 11.1 123 113-251 58-196 (205)
100 3mcz_A O-methyltransferase; ad 99.5 6.6E-13 2.3E-17 121.1 17.3 146 106-253 169-350 (352)
101 1x19_A CRTF-related protein; m 99.5 4.6E-13 1.6E-17 123.0 16.3 143 105-251 180-358 (359)
102 2fyt_A Protein arginine N-meth 99.5 8.4E-14 2.9E-18 128.2 11.4 88 113-200 62-168 (340)
103 1qzz_A RDMB, aclacinomycin-10- 99.5 2.4E-13 8.3E-18 124.8 14.1 139 112-253 179-357 (374)
104 3q7e_A Protein arginine N-meth 99.5 6.8E-14 2.3E-18 129.1 10.4 88 114-201 65-171 (349)
105 2nyu_A Putative ribosomal RNA 99.5 1.6E-13 5.6E-18 114.1 11.2 94 111-204 18-146 (196)
106 3hp7_A Hemolysin, putative; st 99.5 9.5E-14 3.2E-18 126.4 10.4 117 115-234 85-226 (291)
107 3i53_A O-methyltransferase; CO 99.5 4.1E-13 1.4E-17 121.9 14.4 134 114-251 168-331 (332)
108 2ipx_A RRNA 2'-O-methyltransfe 99.5 8.1E-14 2.8E-18 120.1 9.3 137 112-251 74-231 (233)
109 1fp1_D Isoliquiritigenin 2'-O- 99.5 4.3E-13 1.5E-17 124.0 14.5 123 113-238 207-358 (372)
110 3p9n_A Possible methyltransfer 99.5 1.2E-13 4E-18 115.3 9.7 91 114-204 43-154 (189)
111 3gwz_A MMCR; methyltransferase 99.5 1.3E-12 4.5E-17 120.9 17.6 144 105-251 192-368 (369)
112 1dus_A MJ0882; hypothetical pr 99.5 2.3E-13 7.7E-18 111.7 11.0 91 112-204 49-158 (194)
113 3sso_A Methyltransferase; macr 99.5 6.1E-14 2.1E-18 133.0 8.4 100 102-202 204-323 (419)
114 2oxt_A Nucleoside-2'-O-methylt 99.5 1.6E-13 5.5E-18 122.8 10.6 95 106-204 65-186 (265)
115 3iv6_A Putative Zn-dependent a 99.5 1.8E-13 6E-18 122.6 10.9 97 106-204 36-149 (261)
116 1tw3_A COMT, carminomycin 4-O- 99.5 1.1E-12 3.6E-17 120.1 16.0 139 112-253 180-357 (360)
117 2pwy_A TRNA (adenine-N(1)-)-me 99.5 3.1E-13 1.1E-17 117.0 11.7 115 107-236 88-220 (258)
118 2wa2_A Non-structural protein 99.5 1.6E-13 5.5E-18 123.5 10.0 95 105-203 72-193 (276)
119 1fp2_A Isoflavone O-methyltran 99.5 7.1E-13 2.4E-17 121.5 14.5 134 113-250 186-351 (352)
120 3lpm_A Putative methyltransfer 99.5 6.8E-13 2.3E-17 116.5 13.7 131 112-254 45-221 (259)
121 1jsx_A Glucose-inhibited divis 99.5 1.2E-12 4.2E-17 109.8 14.7 122 115-252 65-205 (207)
122 3r0q_C Probable protein argini 99.5 3.1E-13 1E-17 126.0 11.5 90 112-202 60-168 (376)
123 4df3_A Fibrillarin-like rRNA/T 99.4 3.9E-14 1.3E-18 125.1 4.9 134 112-248 74-227 (233)
124 3eey_A Putative rRNA methylase 99.4 6.2E-13 2.1E-17 111.0 11.7 134 113-252 20-188 (197)
125 1p91_A Ribosomal RNA large sub 99.4 5.2E-13 1.8E-17 116.9 11.7 87 114-206 84-181 (269)
126 3p9c_A Caffeic acid O-methyltr 99.4 3.5E-12 1.2E-16 118.1 17.9 135 113-250 199-363 (364)
127 3lbf_A Protein-L-isoaspartate 99.4 4.2E-13 1.4E-17 113.1 10.5 92 107-205 69-176 (210)
128 2ld4_A Anamorsin; methyltransf 99.4 1.9E-13 6.6E-18 112.5 8.1 115 112-237 9-133 (176)
129 3htx_A HEN1; HEN1, small RNA m 99.4 1.9E-12 6.5E-17 131.8 16.8 90 115-205 721-836 (950)
130 1g6q_1 HnRNP arginine N-methyl 99.4 4.4E-13 1.5E-17 122.6 10.5 87 114-200 37-142 (328)
131 3njr_A Precorrin-6Y methylase; 99.4 1.3E-12 4.3E-17 111.5 12.7 104 112-231 52-171 (204)
132 1yzh_A TRNA (guanine-N(7)-)-me 99.4 7E-13 2.4E-17 112.8 11.0 109 115-234 41-176 (214)
133 3g89_A Ribosomal RNA small sub 99.4 5.4E-13 1.8E-17 117.8 10.6 130 114-255 79-232 (249)
134 1g8a_A Fibrillarin-like PRE-rR 99.4 1.3E-12 4.4E-17 111.8 12.6 135 113-251 71-226 (227)
135 1l3i_A Precorrin-6Y methyltran 99.4 4.8E-13 1.6E-17 109.6 9.5 105 112-232 30-152 (192)
136 1vbf_A 231AA long hypothetical 99.4 5.3E-13 1.8E-17 114.1 9.8 94 105-205 60-167 (231)
137 1yb2_A Hypothetical protein TA 99.4 6.9E-13 2.4E-17 117.6 10.2 110 111-236 106-233 (275)
138 3hm2_A Precorrin-6Y C5,15-meth 99.4 7.8E-13 2.7E-17 107.9 9.8 105 112-231 22-144 (178)
139 2yxd_A Probable cobalt-precorr 99.4 1.5E-12 5.2E-17 106.0 11.4 103 112-232 32-149 (183)
140 2b3t_A Protein methyltransfera 99.4 2.4E-12 8.1E-17 114.1 13.5 125 114-251 108-275 (276)
141 2nxc_A L11 mtase, ribosomal pr 99.4 1.1E-12 3.9E-17 115.5 11.4 123 113-251 118-254 (254)
142 2y1w_A Histone-arginine methyl 99.4 4.8E-13 1.7E-17 123.2 9.4 89 113-202 48-154 (348)
143 3dou_A Ribosomal RNA large sub 99.4 1.6E-12 5.6E-17 110.2 11.8 93 111-204 21-140 (191)
144 1af7_A Chemotaxis receptor met 99.4 4.7E-13 1.6E-17 120.6 8.3 88 115-202 105-251 (274)
145 3mb5_A SAM-dependent methyltra 99.4 1.3E-12 4.3E-17 113.5 10.7 115 108-238 86-220 (255)
146 3dmg_A Probable ribosomal RNA 99.4 1.1E-12 3.6E-17 123.1 10.9 109 114-233 232-360 (381)
147 3p2e_A 16S rRNA methylase; met 99.4 6.6E-13 2.3E-17 115.4 8.4 120 114-233 23-178 (225)
148 2fca_A TRNA (guanine-N(7)-)-me 99.4 8.2E-13 2.8E-17 113.2 8.8 90 115-204 38-154 (213)
149 2esr_A Methyltransferase; stru 99.4 2E-13 6.9E-18 112.1 4.7 92 113-204 29-139 (177)
150 2fhp_A Methylase, putative; al 99.4 5E-13 1.7E-17 109.9 7.1 92 114-205 43-156 (187)
151 3id6_C Fibrillarin-like rRNA/T 99.4 3.7E-12 1.3E-16 112.2 13.0 136 112-252 73-231 (232)
152 3opn_A Putative hemolysin; str 99.4 7.6E-13 2.6E-17 115.9 8.1 114 114-234 36-178 (232)
153 1zg3_A Isoflavanone 4'-O-methy 99.4 7.2E-12 2.5E-16 115.0 15.0 134 114-250 192-357 (358)
154 3ckk_A TRNA (guanine-N(7)-)-me 99.4 1.1E-12 3.7E-17 114.9 8.6 91 114-204 45-169 (235)
155 3dxy_A TRNA (guanine-N(7)-)-me 99.4 5.1E-13 1.7E-17 115.6 6.3 90 115-204 34-151 (218)
156 3gdh_A Trimethylguanosine synt 99.4 1.8E-14 6.1E-19 124.3 -3.3 122 115-238 78-217 (241)
157 2ift_A Putative methylase HI07 99.4 5.7E-13 2E-17 113.1 6.0 90 115-204 53-164 (201)
158 1i9g_A Hypothetical protein RV 99.4 2.4E-12 8.3E-17 113.2 10.0 95 107-205 91-205 (280)
159 2bm8_A Cephalosporin hydroxyla 99.4 3.3E-12 1.1E-16 111.6 10.8 108 115-231 81-208 (236)
160 2qe6_A Uncharacterized protein 99.3 6.5E-12 2.2E-16 112.3 12.0 117 115-231 77-235 (274)
161 2fpo_A Methylase YHHF; structu 99.3 1.7E-12 5.8E-17 110.3 7.3 90 115-204 54-161 (202)
162 1o54_A SAM-dependent O-methylt 99.3 5.4E-12 1.9E-16 111.6 10.8 114 108-237 105-236 (277)
163 2yxe_A Protein-L-isoaspartate 99.3 5.7E-12 1.9E-16 106.5 10.1 92 108-205 70-179 (215)
164 2p41_A Type II methyltransfera 99.3 7.1E-12 2.4E-16 114.2 11.3 93 108-204 75-192 (305)
165 2frn_A Hypothetical protein PH 99.3 3.7E-12 1.3E-16 113.7 9.2 111 113-232 123-249 (278)
166 4azs_A Methyltransferase WBDD; 99.3 1.4E-12 5E-17 127.6 6.8 89 114-203 65-173 (569)
167 2b25_A Hypothetical protein; s 99.3 3.8E-12 1.3E-16 115.9 9.0 90 112-205 102-221 (336)
168 1dl5_A Protein-L-isoaspartate 99.3 5.1E-12 1.8E-16 114.6 9.6 94 106-205 66-177 (317)
169 4hc4_A Protein arginine N-meth 99.3 1.4E-11 4.9E-16 115.6 12.7 86 115-201 83-187 (376)
170 2ozv_A Hypothetical protein AT 99.3 2.3E-11 7.8E-16 107.5 13.2 129 113-253 34-213 (260)
171 2vdv_E TRNA (guanine-N(7)-)-me 99.3 3.2E-12 1.1E-16 111.4 7.6 88 113-204 47-174 (246)
172 2yvl_A TRMI protein, hypotheti 99.3 2.1E-11 7.1E-16 104.9 12.4 89 111-204 87-191 (248)
173 1ws6_A Methyltransferase; stru 99.3 8.4E-13 2.9E-17 106.8 3.3 89 115-205 41-149 (171)
174 2xyq_A Putative 2'-O-methyl tr 99.3 3E-11 1E-15 109.7 13.2 114 112-238 60-195 (290)
175 3u81_A Catechol O-methyltransf 99.3 1.4E-11 4.9E-16 105.3 10.5 87 115-202 58-169 (221)
176 3bzb_A Uncharacterized protein 99.3 5.5E-12 1.9E-16 112.7 8.1 115 113-233 77-230 (281)
177 1u2z_A Histone-lysine N-methyl 99.3 8.1E-12 2.8E-16 119.3 9.6 97 105-202 232-358 (433)
178 3r3h_A O-methyltransferase, SA 99.3 1.3E-11 4.4E-16 108.2 10.2 86 115-202 60-169 (242)
179 4a6d_A Hydroxyindole O-methylt 99.3 1.3E-10 4.5E-15 107.1 17.4 138 112-251 176-345 (353)
180 4dcm_A Ribosomal RNA large sub 99.3 1.8E-11 6.2E-16 114.4 11.5 109 114-233 221-354 (375)
181 1i1n_A Protein-L-isoaspartate 99.3 1.4E-11 4.6E-16 105.1 9.2 87 113-205 75-184 (226)
182 1jg1_A PIMT;, protein-L-isoasp 99.3 1.3E-11 4.3E-16 106.6 9.0 87 112-205 88-191 (235)
183 3bwc_A Spermidine synthase; SA 99.3 6.3E-12 2.2E-16 113.9 7.2 116 114-236 94-236 (304)
184 3tma_A Methyltransferase; thum 99.3 9.9E-11 3.4E-15 107.5 15.3 100 105-204 193-318 (354)
185 2pjd_A Ribosomal RNA small sub 99.3 5.6E-12 1.9E-16 115.6 6.7 89 114-204 195-304 (343)
186 3b3j_A Histone-arginine methyl 99.2 1.6E-11 5.4E-16 118.4 9.3 99 103-202 146-262 (480)
187 2pbf_A Protein-L-isoaspartate 99.2 2.7E-11 9.2E-16 103.3 9.5 88 112-205 77-195 (227)
188 1o9g_A RRNA methyltransferase; 99.2 2.2E-11 7.5E-16 106.0 9.0 88 115-202 51-213 (250)
189 3adn_A Spermidine synthase; am 99.2 3.8E-11 1.3E-15 108.8 10.6 91 114-204 82-199 (294)
190 3tfw_A Putative O-methyltransf 99.2 3.1E-11 1.1E-15 105.6 8.9 86 115-202 63-169 (248)
191 1ne2_A Hypothetical protein TA 99.2 1.2E-10 4.3E-15 97.5 12.1 78 113-193 49-139 (200)
192 3ntv_A MW1564 protein; rossman 99.2 2E-11 7E-16 105.5 7.1 86 115-202 71-175 (232)
193 3tr6_A O-methyltransferase; ce 99.2 3.7E-11 1.3E-15 102.1 8.3 86 115-202 64-173 (225)
194 1nv8_A HEMK protein; class I a 99.2 7.9E-11 2.7E-15 105.8 10.9 119 115-251 123-281 (284)
195 1r18_A Protein-L-isoaspartate( 99.2 4.8E-11 1.6E-15 102.3 9.0 86 112-204 81-195 (227)
196 3dr5_A Putative O-methyltransf 99.2 4.2E-11 1.4E-15 103.7 7.7 99 102-202 43-162 (221)
197 3c3p_A Methyltransferase; NP_9 99.1 3.2E-11 1.1E-15 102.0 5.9 85 115-202 56-159 (210)
198 2ih2_A Modification methylase 99.1 1E-09 3.4E-14 102.0 16.2 132 114-253 38-212 (421)
199 3giw_A Protein of unknown func 99.1 1.9E-10 6.5E-15 103.9 10.4 115 117-231 80-240 (277)
200 2gpy_A O-methyltransferase; st 99.1 6.4E-11 2.2E-15 101.7 6.5 86 115-202 54-159 (233)
201 1ixk_A Methyltransferase; open 99.1 2.1E-10 7.3E-15 104.3 10.2 92 112-203 115-246 (315)
202 3duw_A OMT, O-methyltransferas 99.1 1.2E-10 4.2E-15 99.0 7.7 86 115-202 58-166 (223)
203 1iy9_A Spermidine synthase; ro 99.1 1E-10 3.4E-15 104.7 7.5 90 114-203 74-189 (275)
204 1uir_A Polyamine aminopropyltr 99.1 9.3E-11 3.2E-15 106.8 6.7 90 114-203 76-195 (314)
205 1inl_A Spermidine synthase; be 99.1 1.2E-10 4.2E-15 105.1 7.2 90 114-203 89-205 (296)
206 3gjy_A Spermidine synthase; AP 99.1 1E-10 3.4E-15 107.6 6.7 88 117-204 91-201 (317)
207 3a27_A TYW2, uncharacterized p 99.1 2E-10 6.8E-15 102.2 8.3 89 112-204 116-220 (272)
208 3tm4_A TRNA (guanine N2-)-meth 99.1 8E-10 2.7E-14 102.7 12.5 118 113-246 215-360 (373)
209 1zq9_A Probable dimethyladenos 99.1 8.1E-11 2.8E-15 105.7 5.5 93 104-199 17-143 (285)
210 3ajd_A Putative methyltransfer 99.1 3.6E-10 1.2E-14 100.5 9.6 91 113-203 81-211 (274)
211 3fzg_A 16S rRNA methylase; met 99.1 3.3E-11 1.1E-15 103.9 2.7 100 100-202 36-151 (200)
212 1xj5_A Spermidine synthase 1; 99.1 3.5E-10 1.2E-14 104.3 9.6 91 113-203 118-235 (334)
213 1yub_A Ermam, rRNA methyltrans 99.1 8.4E-12 2.9E-16 109.1 -1.3 95 108-204 22-146 (245)
214 2pt6_A Spermidine synthase; tr 99.1 1.6E-10 5.4E-15 105.8 6.8 91 114-204 115-231 (321)
215 1mjf_A Spermidine synthase; sp 99.1 1.4E-10 4.8E-15 103.8 6.4 89 114-203 74-193 (281)
216 1sui_A Caffeoyl-COA O-methyltr 99.1 2.1E-10 7.1E-15 100.8 7.1 86 115-202 79-189 (247)
217 2o07_A Spermidine synthase; st 99.0 1.5E-10 5.2E-15 105.2 6.1 90 114-203 94-209 (304)
218 2f8l_A Hypothetical protein LM 99.0 2E-09 6.8E-14 98.5 13.3 133 114-254 129-307 (344)
219 2b2c_A Spermidine synthase; be 99.0 1.7E-10 5.9E-15 105.5 5.9 90 114-203 107-222 (314)
220 2cmg_A Spermidine synthase; tr 99.0 4.5E-10 1.5E-14 100.1 8.3 82 114-203 71-171 (262)
221 1wy7_A Hypothetical protein PH 99.0 4.1E-09 1.4E-13 88.3 13.5 104 113-232 47-167 (207)
222 2h00_A Methyltransferase 10 do 99.0 2.3E-10 7.7E-15 99.5 5.8 123 115-237 65-235 (254)
223 2i7c_A Spermidine synthase; tr 99.0 2.6E-10 9E-15 102.2 6.4 90 114-203 77-192 (283)
224 2igt_A SAM dependent methyltra 99.0 1.6E-10 5.5E-15 106.3 4.5 90 114-204 152-273 (332)
225 2hnk_A SAM-dependent O-methylt 99.0 2.9E-10 1E-14 98.2 5.6 86 115-202 60-180 (239)
226 3cbg_A O-methyltransferase; cy 99.0 3.7E-10 1.3E-14 97.7 5.9 86 115-202 72-181 (232)
227 2qm3_A Predicted methyltransfe 99.0 1E-09 3.5E-14 101.9 9.1 89 114-203 171-278 (373)
228 1sqg_A SUN protein, FMU protei 99.0 1.8E-09 6.2E-14 102.0 11.0 91 113-203 244-374 (429)
229 3lec_A NADB-rossmann superfami 99.0 1.6E-09 5.6E-14 95.3 9.4 112 111-236 17-145 (230)
230 2yxl_A PH0851 protein, 450AA l 99.0 2.5E-09 8.5E-14 101.8 10.8 92 112-203 256-389 (450)
231 2avd_A Catechol-O-methyltransf 98.9 6.6E-10 2.3E-14 94.6 5.8 87 114-202 68-178 (229)
232 3gnl_A Uncharacterized protein 98.9 2.3E-09 7.9E-14 95.2 8.6 110 111-234 17-143 (244)
233 2frx_A Hypothetical protein YE 98.9 3.8E-09 1.3E-13 101.9 9.9 89 115-203 117-246 (479)
234 3c3y_A Pfomt, O-methyltransfer 98.9 1.5E-09 5E-14 94.4 6.1 87 114-202 69-180 (237)
235 3kr9_A SAM-dependent methyltra 98.9 6.2E-09 2.1E-13 91.3 10.1 110 112-236 12-139 (225)
236 2yx1_A Hypothetical protein MJ 98.9 5.6E-09 1.9E-13 95.7 10.0 83 113-203 193-291 (336)
237 4dmg_A Putative uncharacterize 98.9 1.9E-09 6.5E-14 101.5 6.9 90 113-203 212-326 (393)
238 3m6w_A RRNA methylase; rRNA me 98.9 1.5E-09 5.1E-14 104.5 6.2 91 113-203 99-229 (464)
239 3evf_A RNA-directed RNA polyme 98.9 1E-08 3.5E-13 92.4 11.1 99 106-204 65-185 (277)
240 2b78_A Hypothetical protein SM 98.9 3.2E-09 1.1E-13 99.3 7.7 91 114-204 211-332 (385)
241 1qam_A ERMC' methyltransferase 98.9 1.7E-09 5.9E-14 94.8 5.6 96 104-201 19-144 (244)
242 1uwv_A 23S rRNA (uracil-5-)-me 98.9 3.2E-08 1.1E-12 93.7 14.4 136 102-252 273-432 (433)
243 3v97_A Ribosomal RNA large sub 98.9 1.4E-09 4.9E-14 109.3 5.3 90 115-204 539-658 (703)
244 2h1r_A Dimethyladenosine trans 98.9 5E-09 1.7E-13 94.6 8.4 61 112-175 39-114 (299)
245 2as0_A Hypothetical protein PH 98.8 1E-09 3.4E-14 102.5 3.6 90 114-203 216-335 (396)
246 3c0k_A UPF0064 protein YCCW; P 98.8 2.6E-09 9E-14 99.7 5.5 90 114-203 219-339 (396)
247 3m4x_A NOL1/NOP2/SUN family pr 98.8 7.4E-09 2.5E-13 99.4 7.4 91 113-203 103-234 (456)
248 3k6r_A Putative transferase PH 98.8 7.8E-09 2.7E-13 93.3 6.5 110 113-231 123-248 (278)
249 2okc_A Type I restriction enzy 98.8 1.3E-08 4.5E-13 96.5 8.3 133 114-253 170-358 (445)
250 2efj_A 3,7-dimethylxanthine me 98.7 1.7E-08 5.8E-13 95.0 8.1 116 116-231 53-282 (384)
251 3gru_A Dimethyladenosine trans 98.7 2.3E-08 7.9E-13 90.8 8.6 70 104-174 39-121 (295)
252 3frh_A 16S rRNA methylase; met 98.7 1.9E-08 6.4E-13 89.6 7.4 97 100-204 93-206 (253)
253 1wxx_A TT1595, hypothetical pr 98.7 4E-09 1.4E-13 98.1 3.1 89 115-204 209-326 (382)
254 2jjq_A Uncharacterized RNA met 98.7 8.9E-08 3E-12 90.9 11.2 86 113-203 288-387 (425)
255 3bt7_A TRNA (uracil-5-)-methyl 98.6 8.2E-08 2.8E-12 88.9 9.0 131 102-251 201-368 (369)
256 3b5i_A S-adenosyl-L-methionine 98.6 3E-07 1E-11 86.1 12.1 90 116-205 53-227 (374)
257 3k0b_A Predicted N6-adenine-sp 98.5 1.5E-07 5E-12 88.5 8.5 101 103-204 189-351 (393)
258 3fut_A Dimethyladenosine trans 98.5 1.4E-07 4.9E-12 84.5 7.8 69 104-174 36-117 (271)
259 3ldu_A Putative methylase; str 98.5 1.1E-07 3.7E-12 89.1 7.3 101 103-204 183-345 (385)
260 3tqs_A Ribosomal RNA small sub 98.5 1.4E-07 4.6E-12 83.8 7.5 69 104-174 18-103 (255)
261 2qfm_A Spermine synthase; sper 98.5 8.1E-08 2.8E-12 89.8 6.0 90 115-204 188-315 (364)
262 3ldg_A Putative uncharacterize 98.5 2.6E-07 8.9E-12 86.7 9.3 102 102-204 181-344 (384)
263 3lcv_B Sisomicin-gentamicin re 98.5 1.1E-07 3.8E-12 85.6 5.3 100 99-202 118-235 (281)
264 2qy6_A UPF0209 protein YFCK; s 98.5 2.2E-07 7.5E-12 82.7 7.0 118 115-248 60-242 (257)
265 1m6e_X S-adenosyl-L-methionnin 98.4 2.9E-07 9.8E-12 85.9 7.6 91 115-205 51-211 (359)
266 3gcz_A Polyprotein; flavivirus 98.4 4.6E-07 1.6E-11 81.9 7.9 99 106-204 81-202 (282)
267 2ar0_A M.ecoki, type I restric 98.4 4.2E-07 1.4E-11 88.7 7.1 92 114-205 168-314 (541)
268 2k4m_A TR8_protein, UPF0146 pr 98.3 1.8E-06 6.2E-11 71.2 8.9 83 114-202 34-120 (153)
269 3ftd_A Dimethyladenosine trans 98.3 2.3E-06 7.7E-11 75.5 10.2 71 104-174 20-102 (249)
270 2r6z_A UPF0341 protein in RSP 98.3 8.3E-08 2.8E-12 85.2 0.8 60 114-174 82-168 (258)
271 2b9e_A NOL1/NOP2/SUN domain fa 98.3 2.2E-06 7.4E-11 78.1 9.9 89 113-202 100-233 (309)
272 1qyr_A KSGA, high level kasuga 98.3 4.6E-07 1.6E-11 80.2 4.8 66 106-174 12-97 (252)
273 2oyr_A UPF0341 protein YHIQ; a 98.3 3.1E-07 1E-11 81.9 3.1 83 113-197 84-194 (258)
274 3eld_A Methyltransferase; flav 98.2 7.3E-06 2.5E-10 74.5 11.4 98 108-205 74-193 (300)
275 3khk_A Type I restriction-modi 98.2 7.7E-06 2.6E-10 79.9 12.3 132 117-253 246-447 (544)
276 4gqb_A Protein arginine N-meth 98.2 1E-06 3.5E-11 87.7 5.8 82 116-199 358-463 (637)
277 2dul_A N(2),N(2)-dimethylguano 98.2 1.2E-06 4.1E-11 82.0 5.3 86 115-203 47-164 (378)
278 3uzu_A Ribosomal RNA small sub 98.2 1.7E-06 5.8E-11 77.8 5.9 60 106-165 33-106 (279)
279 4auk_A Ribosomal RNA large sub 98.2 6.1E-06 2.1E-10 77.3 9.7 132 113-251 209-354 (375)
280 2px2_A Genome polyprotein [con 98.2 1.4E-06 4.9E-11 77.9 5.2 98 105-204 63-184 (269)
281 3v97_A Ribosomal RNA large sub 98.2 3.6E-06 1.2E-10 84.6 8.6 103 103-205 178-349 (703)
282 3axs_A Probable N(2),N(2)-dime 98.1 1.6E-06 5.5E-11 81.6 4.3 86 115-203 52-158 (392)
283 3lkz_A Non-structural protein 98.1 2.1E-05 7.3E-10 71.6 11.1 99 104-204 83-205 (321)
284 1m6y_A S-adenosyl-methyltransf 98.0 3.1E-06 1E-10 76.9 4.0 63 112-174 23-105 (301)
285 3lkd_A Type I restriction-modi 98.0 1.3E-05 4.6E-10 78.3 8.5 133 115-253 221-409 (542)
286 3p8z_A Mtase, non-structural p 97.9 6.6E-05 2.3E-09 66.5 11.1 96 105-203 68-186 (267)
287 3ua3_A Protein arginine N-meth 97.9 1.1E-05 3.8E-10 81.1 6.4 83 116-199 410-530 (745)
288 3s1s_A Restriction endonucleas 97.9 5E-05 1.7E-09 77.5 11.1 120 114-238 320-496 (878)
289 3o4f_A Spermidine synthase; am 97.9 5.8E-05 2E-09 68.5 9.7 91 114-204 82-199 (294)
290 3ll7_A Putative methyltransfer 97.7 6.8E-06 2.3E-10 77.8 1.4 61 113-174 91-170 (410)
291 3r24_A NSP16, 2'-O-methyl tran 97.6 0.00017 5.9E-09 65.8 8.8 107 95-204 88-218 (344)
292 2wk1_A NOVP; transferase, O-me 97.5 0.00046 1.6E-08 62.1 10.6 102 96-201 90-242 (282)
293 3cvo_A Methyltransferase-like 97.3 0.0012 4.1E-08 56.7 10.1 81 115-201 30-152 (202)
294 4fzv_A Putative methyltransfer 97.3 0.00021 7.2E-09 66.5 5.5 91 112-202 145-283 (359)
295 3ufb_A Type I restriction-modi 97.3 0.0021 7.3E-08 62.4 12.6 135 114-254 216-415 (530)
296 3c6k_A Spermine synthase; sper 97.3 0.00025 8.5E-09 66.5 5.7 90 114-203 204-331 (381)
297 1wg8_A Predicted S-adenosylmet 96.9 0.00066 2.3E-08 61.3 4.4 36 112-148 19-54 (285)
298 3vyw_A MNMC2; tRNA wobble urid 96.8 0.0045 1.6E-07 56.4 9.4 117 116-248 97-255 (308)
299 2zig_A TTHA0409, putative modi 96.7 0.0018 6.3E-08 57.8 5.7 46 101-148 222-267 (297)
300 2vz8_A Fatty acid synthase; tr 95.5 0.015 5.1E-07 65.9 6.4 89 115-203 1240-1348(2512)
301 1f8f_A Benzyl alcohol dehydrog 95.3 0.052 1.8E-06 49.3 8.4 91 107-202 182-288 (371)
302 2dph_A Formaldehyde dismutase; 94.9 0.092 3.1E-06 48.2 9.0 92 110-202 180-298 (398)
303 2zig_A TTHA0409, putative modi 94.9 0.0086 2.9E-07 53.3 1.7 82 152-233 23-129 (297)
304 1boo_A Protein (N-4 cytosine-s 94.8 0.018 6E-07 52.1 3.5 81 152-233 16-113 (323)
305 1g60_A Adenine-specific methyl 94.7 0.044 1.5E-06 47.8 5.8 46 101-148 199-244 (260)
306 1pl8_A Human sorbitol dehydrog 94.3 0.054 1.9E-06 48.9 5.7 87 111-202 167-272 (356)
307 1kol_A Formaldehyde dehydrogen 94.2 0.045 1.5E-06 50.2 5.0 92 111-202 181-299 (398)
308 1cdo_A Alcohol dehydrogenase; 93.7 0.11 3.7E-06 47.2 6.6 91 107-202 184-293 (374)
309 2jhf_A Alcohol dehydrogenase E 93.3 0.13 4.6E-06 46.6 6.5 91 107-202 183-292 (374)
310 1p0f_A NADP-dependent alcohol 93.3 0.13 4.5E-06 46.6 6.3 91 107-202 183-292 (373)
311 1e3i_A Alcohol dehydrogenase, 93.2 0.16 5.3E-06 46.2 6.6 91 107-202 187-296 (376)
312 2fzw_A Alcohol dehydrogenase c 93.2 0.13 4.5E-06 46.5 6.1 91 107-202 182-291 (373)
313 4ej6_A Putative zinc-binding d 93.1 0.25 8.6E-06 44.9 8.0 88 110-202 177-283 (370)
314 3uko_A Alcohol dehydrogenase c 93.1 0.15 5E-06 46.4 6.4 91 107-202 185-294 (378)
315 3goh_A Alcohol dehydrogenase, 92.4 0.21 7E-06 44.1 6.1 82 109-202 136-228 (315)
316 3two_A Mannitol dehydrogenase; 92.3 0.34 1.2E-05 43.4 7.6 81 112-202 173-264 (348)
317 3m6i_A L-arabinitol 4-dehydrog 92.1 0.16 5.6E-06 45.7 5.2 88 110-202 174-282 (363)
318 3fpc_A NADP-dependent alcohol 92.0 0.37 1.3E-05 43.2 7.4 89 109-202 160-265 (352)
319 3gms_A Putative NADPH:quinone 91.9 0.29 9.9E-06 43.7 6.6 90 106-202 135-242 (340)
320 4dvj_A Putative zinc-dependent 91.6 0.42 1.4E-05 43.3 7.4 81 115-202 171-269 (363)
321 1pqw_A Polyketide synthase; ro 91.1 0.49 1.7E-05 38.5 6.6 85 111-202 34-136 (198)
322 3s2e_A Zinc-containing alcohol 91.0 0.24 8.3E-06 44.1 5.1 86 111-202 162-262 (340)
323 1i4w_A Mitochondrial replicati 91.0 0.31 1.1E-05 44.9 5.8 47 116-162 59-118 (353)
324 3g7u_A Cytosine-specific methy 90.9 0.28 9.5E-06 45.4 5.5 122 117-244 3-159 (376)
325 2oo3_A Protein involved in cat 90.8 0.16 5.5E-06 45.6 3.6 90 115-205 91-200 (283)
326 1e3j_A NADP(H)-dependent ketos 90.8 0.29 1E-05 43.9 5.4 84 111-202 164-270 (352)
327 4b7c_A Probable oxidoreductase 90.7 0.17 6E-06 45.0 3.8 92 104-202 138-247 (336)
328 3tka_A Ribosomal RNA small sub 90.6 0.25 8.6E-06 45.6 4.8 45 104-148 46-92 (347)
329 1v3u_A Leukotriene B4 12- hydr 90.4 0.17 6E-06 44.9 3.5 89 107-202 137-243 (333)
330 3jv7_A ADH-A; dehydrogenase, n 90.0 0.22 7.4E-06 44.6 3.8 83 112-202 168-269 (345)
331 2b5w_A Glucose dehydrogenase; 89.8 0.72 2.5E-05 41.4 7.2 80 117-202 174-272 (357)
332 3uog_A Alcohol dehydrogenase; 89.6 0.1 3.5E-06 47.3 1.4 87 109-202 183-286 (363)
333 1g55_A DNA cytosine methyltran 89.5 0.18 6.1E-06 45.9 2.9 120 117-244 3-156 (343)
334 3ps9_A TRNA 5-methylaminomethy 89.3 0.89 3E-05 44.6 7.9 68 165-248 177-248 (676)
335 3trk_A Nonstructural polyprote 89.2 0.14 4.7E-06 46.0 1.8 83 161-251 205-301 (324)
336 2dq4_A L-threonine 3-dehydroge 88.8 0.44 1.5E-05 42.5 4.9 87 110-202 160-261 (343)
337 1rjd_A PPM1P, carboxy methyl t 88.7 8 0.00027 34.9 13.3 46 98-146 83-129 (334)
338 3pvc_A TRNA 5-methylaminomethy 88.5 0.27 9.2E-06 48.5 3.6 37 165-201 169-209 (689)
339 4gua_A Non-structural polyprot 88.4 0.24 8.3E-06 48.6 3.0 83 160-251 215-311 (670)
340 3ubt_Y Modification methylase 88.2 0.97 3.3E-05 40.0 6.7 122 118-244 2-150 (331)
341 1vj0_A Alcohol dehydrogenase, 88.2 0.28 9.7E-06 44.7 3.3 85 113-202 193-297 (380)
342 2j3h_A NADP-dependent oxidored 88.0 0.3 1E-05 43.5 3.2 87 109-202 149-254 (345)
343 2d8a_A PH0655, probable L-thre 87.9 0.4 1.4E-05 42.9 4.1 86 111-202 164-266 (348)
344 1uuf_A YAHK, zinc-type alcohol 87.8 0.3 1E-05 44.4 3.2 82 112-202 191-287 (369)
345 2hcy_A Alcohol dehydrogenase 1 87.5 0.52 1.8E-05 42.2 4.6 85 112-202 166-268 (347)
346 3qv2_A 5-cytosine DNA methyltr 87.3 0.94 3.2E-05 41.1 6.2 123 116-244 10-167 (327)
347 1eg2_A Modification methylase 87.3 0.31 1E-05 44.1 2.9 41 164-204 55-107 (319)
348 1rjw_A ADH-HT, alcohol dehydro 86.5 0.91 3.1E-05 40.5 5.6 85 112-202 161-260 (339)
349 3ip1_A Alcohol dehydrogenase, 86.4 3.3 0.00011 37.8 9.4 87 112-202 210-317 (404)
350 1yb5_A Quinone oxidoreductase; 86.3 1.1 3.9E-05 40.2 6.1 90 106-202 161-268 (351)
351 1iz0_A Quinone oxidoreductase; 86.2 0.32 1.1E-05 42.6 2.3 88 106-202 117-217 (302)
352 4eye_A Probable oxidoreductase 85.7 0.42 1.4E-05 42.8 2.9 90 105-202 149-256 (342)
353 2h6e_A ADH-4, D-arabinose 1-de 85.6 0.31 1.1E-05 43.6 2.0 83 112-202 168-268 (344)
354 3tos_A CALS11; methyltransfera 84.5 8.6 0.00029 33.7 10.8 36 165-201 180-215 (257)
355 2eih_A Alcohol dehydrogenase; 84.0 0.72 2.5E-05 41.1 3.6 84 112-202 163-264 (343)
356 1piw_A Hypothetical zinc-type 83.9 0.9 3.1E-05 40.8 4.3 88 111-202 175-275 (360)
357 1jvb_A NAD(H)-dependent alcoho 83.8 1.3 4.6E-05 39.4 5.3 86 111-202 166-270 (347)
358 3qwb_A Probable quinone oxidor 83.7 1.9 6.6E-05 38.1 6.3 86 110-202 143-246 (334)
359 1g60_A Adenine-specific methyl 83.4 0.85 2.9E-05 39.4 3.7 21 183-203 54-74 (260)
360 2cdc_A Glucose dehydrogenase g 82.8 2.6 9E-05 37.8 6.9 78 116-202 181-277 (366)
361 3fbg_A Putative arginate lyase 82.7 1.2 4.2E-05 39.7 4.7 81 115-202 150-247 (346)
362 2c7p_A Modification methylase 82.3 1.3 4.6E-05 39.9 4.7 124 116-244 11-160 (327)
363 2zb4_A Prostaglandin reductase 81.9 1.1 3.8E-05 40.1 4.0 90 107-202 150-259 (357)
364 2c0c_A Zinc binding alcohol de 81.2 1.4 4.7E-05 39.7 4.4 87 109-202 157-260 (362)
365 3jyn_A Quinone oxidoreductase; 80.8 2.1 7.1E-05 37.8 5.3 89 107-202 132-238 (325)
366 1boo_A Protein (N-4 cytosine-s 80.2 2.3 7.8E-05 38.1 5.5 45 102-148 240-284 (323)
367 4eez_A Alcohol dehydrogenase 1 80.1 6.2 0.00021 34.8 8.3 87 111-202 159-262 (348)
368 2km1_A Protein DRE2; yeast, an 80.0 1.4 4.9E-05 35.3 3.6 40 162-201 54-96 (136)
369 3nx4_A Putative oxidoreductase 77.8 2.3 8E-05 37.2 4.7 78 118-202 149-240 (324)
370 2py6_A Methyltransferase FKBM; 77.4 2.1 7.2E-05 39.7 4.5 35 114-148 225-262 (409)
371 1eg2_A Modification methylase 77.1 3.8 0.00013 36.8 6.0 46 101-148 229-274 (319)
372 1wly_A CAAR, 2-haloacrylate re 76.9 4.2 0.00014 35.8 6.1 86 110-202 140-243 (333)
373 1qor_A Quinone oxidoreductase; 76.6 0.66 2.3E-05 41.0 0.7 86 110-202 135-238 (327)
374 1tt7_A YHFP; alcohol dehydroge 76.5 2 6.8E-05 37.9 3.9 84 112-202 146-246 (330)
375 1xa0_A Putative NADPH dependen 76.2 3.9 0.00013 35.9 5.7 84 112-202 145-245 (328)
376 2j8z_A Quinone oxidoreductase; 75.7 2.8 9.6E-05 37.5 4.7 86 110-202 157-260 (354)
377 2cf5_A Atccad5, CAD, cinnamyl 75.3 3.4 0.00012 36.9 5.2 85 112-202 176-274 (357)
378 3krt_A Crotonyl COA reductase; 75.2 6.3 0.00022 36.5 7.1 85 111-202 224-343 (456)
379 4h0n_A DNMT2; SAH binding, tra 74.4 1.8 6.2E-05 39.2 3.1 120 117-244 4-156 (333)
380 4dup_A Quinone oxidoreductase; 74.1 0.94 3.2E-05 40.7 1.1 87 109-202 161-264 (353)
381 1zsy_A Mitochondrial 2-enoyl t 74.0 18 0.00062 32.1 9.6 89 107-202 159-269 (357)
382 1yqd_A Sinapyl alcohol dehydro 73.4 6.2 0.00021 35.4 6.4 84 112-202 183-281 (366)
383 4a27_A Synaptic vesicle membra 73.2 1.6 5.3E-05 39.1 2.3 88 106-202 133-237 (349)
384 4a2c_A Galactitol-1-phosphate 72.2 4.5 0.00015 35.6 5.1 89 109-202 154-259 (346)
385 3tqh_A Quinone oxidoreductase; 70.9 2.3 7.9E-05 37.4 2.8 85 109-202 146-244 (321)
386 4a0s_A Octenoyl-COA reductase/ 68.5 12 0.00042 34.3 7.4 83 111-202 216-335 (447)
387 3iht_A S-adenosyl-L-methionine 67.1 27 0.00092 28.8 8.2 86 116-203 41-147 (174)
388 2hwk_A Helicase NSP2; rossman 64.5 6.1 0.00021 35.7 4.2 80 123-203 149-254 (320)
389 2uyo_A Hypothetical protein ML 61.0 55 0.0019 29.0 10.0 118 117-235 104-274 (310)
390 3slk_A Polyketide synthase ext 60.6 9.3 0.00032 38.5 5.2 85 111-202 341-441 (795)
391 3gaz_A Alcohol dehydrogenase s 60.5 3.5 0.00012 36.7 1.9 83 109-202 144-245 (343)
392 2vn8_A Reticulon-4-interacting 57.2 14 0.00049 33.0 5.5 84 113-202 181-279 (375)
393 3fwz_A Inner membrane protein 56.2 44 0.0015 25.2 7.5 83 116-203 7-105 (140)
394 3gqv_A Enoyl reductase; medium 55.1 16 0.00056 32.6 5.5 82 114-202 163-262 (371)
395 3ius_A Uncharacterized conserv 54.8 91 0.0031 25.8 10.3 81 117-202 6-101 (286)
396 1gu7_A Enoyl-[acyl-carrier-pro 53.8 11 0.00038 33.4 4.1 85 111-202 162-274 (364)
397 2qrv_A DNA (cytosine-5)-methyl 53.6 13 0.00046 32.9 4.5 60 115-174 15-90 (295)
398 3k6j_A Protein F01G10.3, confi 53.1 22 0.00076 33.6 6.2 81 117-202 55-165 (460)
399 1zcj_A Peroxisomal bifunctiona 53.0 25 0.00084 32.9 6.5 80 117-201 38-148 (463)
400 3c85_A Putative glutathione-re 52.8 41 0.0014 26.4 7.0 85 116-203 39-139 (183)
401 3o8q_A Shikimate 5-dehydrogena 49.8 35 0.0012 29.9 6.6 68 103-174 113-194 (281)
402 4e12_A Diketoreductase; oxidor 49.3 4.7 0.00016 34.9 0.8 82 117-200 5-118 (283)
403 3me5_A Cytosine-specific methy 46.0 15 0.0005 35.1 3.8 32 117-148 89-120 (482)
404 3tum_A Shikimate dehydrogenase 45.4 1.4E+02 0.0048 25.8 9.8 112 103-232 112-242 (269)
405 4dio_A NAD(P) transhydrogenase 44.4 10 0.00034 35.5 2.2 87 115-202 189-311 (405)
406 3pwz_A Shikimate dehydrogenase 43.3 33 0.0011 29.8 5.4 58 114-174 118-188 (272)
407 3p2y_A Alanine dehydrogenase/p 42.3 11 0.00039 34.8 2.3 87 115-202 183-301 (381)
408 1l7d_A Nicotinamide nucleotide 41.8 15 0.00052 33.4 3.0 34 115-149 171-206 (384)
409 3don_A Shikimate dehydrogenase 41.4 13 0.00045 32.6 2.4 34 115-148 116-151 (277)
410 3evt_A Phosphoglycerate dehydr 40.1 35 0.0012 30.5 5.2 81 115-201 136-225 (324)
411 2cuk_A Glycerate dehydrogenase 39.5 31 0.0011 30.5 4.6 78 115-201 143-227 (311)
412 3pi7_A NADH oxidoreductase; gr 38.8 35 0.0012 30.0 4.9 80 115-202 163-262 (349)
413 2raf_A Putative dinucleotide-b 38.1 60 0.002 26.5 6.0 70 115-203 18-89 (209)
414 2pv7_A T-protein [includes: ch 37.1 35 0.0012 29.6 4.5 73 117-201 22-97 (298)
415 3gvx_A Glycerate dehydrogenase 36.8 33 0.0011 30.3 4.3 80 115-201 121-207 (290)
416 3e8x_A Putative NAD-dependent 36.3 99 0.0034 24.9 7.1 58 115-174 20-91 (236)
417 3mog_A Probable 3-hydroxybutyr 35.7 12 0.00043 35.4 1.5 80 117-201 6-118 (483)
418 4e21_A 6-phosphogluconate dehy 35.3 36 0.0012 30.8 4.4 84 115-201 21-113 (358)
419 3ce6_A Adenosylhomocysteinase; 35.0 34 0.0012 32.6 4.4 81 113-202 271-360 (494)
420 3oig_A Enoyl-[acyl-carrier-pro 34.3 1.2E+02 0.0042 24.9 7.5 90 115-205 6-149 (266)
421 2g76_A 3-PGDH, D-3-phosphoglyc 34.1 23 0.00078 31.9 2.9 81 115-201 164-253 (335)
422 1ks9_A KPA reductase;, 2-dehyd 33.9 65 0.0022 26.9 5.7 82 118-202 2-96 (291)
423 3d4o_A Dipicolinate synthase s 33.3 35 0.0012 29.5 3.9 83 114-202 153-243 (293)
424 3qha_A Putative oxidoreductase 33.2 58 0.002 28.0 5.3 79 117-201 16-103 (296)
425 3rht_A (gatase1)-like protein; 33.0 38 0.0013 29.4 4.1 72 117-203 5-86 (259)
426 3c24_A Putative oxidoreductase 32.5 30 0.001 29.5 3.3 81 117-200 12-98 (286)
427 2vhw_A Alanine dehydrogenase; 32.1 2.7 9.3E-05 38.4 -3.7 87 115-202 167-267 (377)
428 3ggo_A Prephenate dehydrogenas 32.0 55 0.0019 28.8 5.0 81 117-201 34-126 (314)
429 2f1k_A Prephenate dehydrogenas 31.8 1.1E+02 0.0037 25.6 6.7 76 118-200 2-88 (279)
430 1qp8_A Formate dehydrogenase; 30.9 86 0.0029 27.5 6.1 80 115-202 123-209 (303)
431 1pjc_A Protein (L-alanine dehy 30.4 12 0.00042 33.7 0.4 86 116-202 167-266 (361)
432 1f0y_A HCDH, L-3-hydroxyacyl-C 30.3 20 0.00068 31.0 1.7 31 117-148 16-48 (302)
433 1id1_A Putative potassium chan 30.3 1.4E+02 0.0048 22.5 6.6 84 116-204 3-106 (153)
434 1wg8_A Predicted S-adenosylmet 30.2 22 0.00075 31.7 2.0 22 182-203 212-233 (285)
435 2vz8_A Fatty acid synthase; tr 30.1 22 0.00076 40.5 2.4 87 109-202 1661-1769(2512)
436 2dpo_A L-gulonate 3-dehydrogen 29.9 24 0.00081 31.5 2.2 84 117-201 7-121 (319)
437 1wwk_A Phosphoglycerate dehydr 29.7 13 0.00046 32.9 0.5 82 115-202 141-231 (307)
438 2rir_A Dipicolinate synthase, 29.0 42 0.0014 29.1 3.7 83 114-202 155-245 (300)
439 3pp8_A Glyoxylate/hydroxypyruv 28.7 44 0.0015 29.7 3.8 81 115-201 138-227 (315)
440 3ond_A Adenosylhomocysteinase; 28.6 51 0.0017 31.5 4.4 78 114-201 263-350 (488)
441 1x13_A NAD(P) transhydrogenase 28.5 23 0.00079 32.6 1.9 33 115-148 171-205 (401)
442 3tka_A Ribosomal RNA small sub 28.4 25 0.00084 32.3 2.0 21 183-203 254-274 (347)
443 2qrv_B DNA (cytosine-5)-methyl 28.0 44 0.0015 28.8 3.5 74 116-196 33-117 (230)
444 3h5n_A MCCB protein; ubiquitin 27.4 2.3E+02 0.0078 25.3 8.4 32 115-146 117-150 (353)
445 2eez_A Alanine dehydrogenase; 27.4 4.6 0.00016 36.6 -3.0 85 115-202 165-265 (369)
446 4hy3_A Phosphoglycerate oxidor 26.7 31 0.001 31.6 2.4 82 115-202 175-265 (365)
447 2ekl_A D-3-phosphoglycerate de 26.7 31 0.0011 30.5 2.4 81 115-201 141-230 (313)
448 4dcm_A Ribosomal RNA large sub 26.6 2E+02 0.007 25.7 8.0 83 115-202 38-135 (375)
449 3hg7_A D-isomer specific 2-hyd 26.6 42 0.0014 30.1 3.2 33 115-148 139-173 (324)
450 2pv0_B DNA (cytosine-5)-methyl 26.4 1E+02 0.0034 28.6 5.8 73 117-196 190-273 (386)
451 3l9w_A Glutathione-regulated p 26.4 99 0.0034 28.4 5.9 86 116-204 4-103 (413)
452 3d1l_A Putative NADP oxidoredu 26.0 25 0.00085 29.6 1.5 80 117-201 11-100 (266)
453 4dgs_A Dehydrogenase; structur 25.6 74 0.0025 28.6 4.7 84 115-201 170-256 (340)
454 3dmg_A Probable ribosomal RNA 25.2 51 0.0017 30.0 3.6 86 115-203 45-139 (381)
455 1v54_G Cytochrome C oxidase po 25.0 1.1E+02 0.0039 22.1 4.8 44 14-65 16-60 (85)
456 4e2x_A TCAB9; kijanose, tetron 24.8 2.7E+02 0.0094 24.6 8.5 85 115-204 318-411 (416)
457 1dxy_A D-2-hydroxyisocaproate 24.6 44 0.0015 29.8 3.0 80 115-202 144-232 (333)
458 3swr_A DNA (cytosine-5)-methyl 24.1 56 0.0019 34.0 4.0 32 117-148 541-573 (1002)
459 1m6y_A S-adenosyl-methyltransf 23.8 30 0.001 30.6 1.7 21 183-203 225-245 (301)
460 4dkj_A Cytosine-specific methy 23.4 43 0.0015 31.0 2.7 31 117-147 11-47 (403)
461 4g2n_A D-isomer specific 2-hyd 23.3 60 0.002 29.3 3.6 80 115-201 172-261 (345)
462 2ew2_A 2-dehydropantoate 2-red 23.1 59 0.002 27.5 3.4 82 117-201 4-106 (316)
463 1gdh_A D-glycerate dehydrogena 22.6 37 0.0013 30.1 2.1 81 115-201 145-236 (320)
464 2cvz_A Dehydrogenase, 3-hydrox 22.6 73 0.0025 26.7 3.9 78 118-201 3-88 (289)
465 3g0o_A 3-hydroxyisobutyrate de 22.6 28 0.00095 30.1 1.2 32 116-148 7-40 (303)
466 2g1u_A Hypothetical protein TM 22.2 87 0.003 23.8 4.0 87 114-203 17-118 (155)
467 1zej_A HBD-9, 3-hydroxyacyl-CO 22.2 35 0.0012 30.1 1.8 81 115-203 11-107 (293)
468 2yq5_A D-isomer specific 2-hyd 21.9 45 0.0015 30.1 2.5 80 115-202 147-235 (343)
469 3tnl_A Shikimate dehydrogenase 21.8 1.9E+02 0.0066 25.5 6.7 45 102-147 140-187 (315)
470 3i83_A 2-dehydropantoate 2-red 21.5 3.8E+02 0.013 22.9 8.6 80 117-202 3-104 (320)
471 3jyo_A Quinate/shikimate dehyd 21.4 2E+02 0.0068 24.8 6.6 44 103-147 114-160 (283)
472 3k5p_A D-3-phosphoglycerate de 21.0 76 0.0026 29.5 3.9 33 115-148 155-189 (416)
473 2dbq_A Glyoxylate reductase; D 21.0 47 0.0016 29.6 2.4 81 115-201 149-238 (334)
474 4e5n_A Thermostable phosphite 20.9 29 0.00099 31.1 1.0 76 115-201 144-234 (330)
475 1xdw_A NAD+-dependent (R)-2-hy 20.7 59 0.002 28.9 3.0 80 115-202 145-233 (331)
476 3kkj_A Amine oxidase, flavin-c 20.5 80 0.0027 24.2 3.5 31 118-149 4-36 (336)
477 3gvp_A Adenosylhomocysteinase 20.5 88 0.003 29.4 4.3 82 112-202 216-306 (435)
478 1bg6_A N-(1-D-carboxylethyl)-L 20.3 38 0.0013 29.5 1.6 82 117-201 5-107 (359)
479 4f3n_A Uncharacterized ACR, CO 20.3 2.6E+02 0.0088 26.1 7.4 33 116-148 138-176 (432)
No 1
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.80 E-value=5.7e-19 Score=149.81 Aligned_cols=143 Identities=19% Similarity=0.178 Sum_probs=110.4
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcC--CCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEec
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVG--VSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSN 174 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g--~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~ 174 (258)
.+.++.+|||+|||+|..+..+++.+ ..+|+|+|+++. ...+.++|+.++|+++++||+|+++
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 113 (219)
T 3dh0_A 34 GLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMA 113 (219)
T ss_dssp TCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEE
T ss_pred CCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEee
Confidence 45678899999999999999988764 348999998742 2357889999999999999999995
Q ss_pred -cccccCChHHHHHHHHhcccCCcEEEEEeccccCc-CcCCCCCCCChhHHHHHhhcCceEEeeeecCCCCeEEEEEEeC
Q 025071 175 -VFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRA-DKYSANDLFSVKPLVKLFRESELVAVRKVDGFGLDTEVVFRKK 252 (258)
Q Consensus 175 -~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~-~~y~~~~~~s~~~l~~lf~~~~~~~v~~v~g~~l~~~~~f~K~ 252 (258)
+++|+.++..+++++.|+|||||.+++........ ........++.+++.++++++|+..+...+-.+....++++|.
T Consensus 114 ~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k~ 193 (219)
T 3dh0_A 114 FTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGKYCFGVYAMIV 193 (219)
T ss_dssp SCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETTTEEEEEEECC
T ss_pred hhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCCceEEEEEEec
Confidence 89999999999999999999999999875432211 1112345578999999999999876665543334457778875
Q ss_pred Cc
Q 025071 253 KK 254 (258)
Q Consensus 253 ~~ 254 (258)
..
T Consensus 194 ~~ 195 (219)
T 3dh0_A 194 KQ 195 (219)
T ss_dssp --
T ss_pred cc
Confidence 44
No 2
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.79 E-value=1.1e-18 Score=153.11 Aligned_cols=170 Identities=16% Similarity=0.220 Sum_probs=112.5
Q ss_pred cCCCCccHHHHHHHHHhcccChhhHhhhCchh----HHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhc
Q 025071 61 IRPGYASYETYIQHQLNKTLNPKLRAVWTTRD----WERKVRVFSRFFQDLKQRHFLFNESKALSIGARVGQEVAALKLV 136 (258)
Q Consensus 61 ~r~~f~~y~~~l~~~l~~~l~~~l~~~W~~~~----w~~~~~~~~~~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~ 136 (258)
+++.|+...++.+..++..++- .+|.... +.+. ...+.+.+++...+.++.+|||||||+|..+..+++.
T Consensus 9 ~~~~Yd~~~~~y~~~~~~~~~~---~y~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~ 82 (273)
T 3bus_A 9 VRQMYDDFTDPFARIWGENLHF---GYWEDAGADVSVDDA---TDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATA 82 (273)
T ss_dssp --------------CCGGGCCC---CCCCCSSCCCCHHHH---HHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHH
T ss_pred HHHHHcchHHHHHHHcCCCceE---EecCCCccccCHHHH---HHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHh
Confidence 4456666555444434433321 4564422 2222 2334455555545678899999999999999988874
Q ss_pred CCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEec-cccccCChHHHHHHHHhcccCCcEE
Q 025071 137 GVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHALYPWKFVGEIERTLKPAGVC 199 (258)
Q Consensus 137 g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~p~~~l~Ei~RVLKPGG~l 199 (258)
...+|+|+|+++. ...++.+|+.++|+++++||+|++. +++|+.++..+++|+.|+|||||++
T Consensus 83 ~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l 162 (273)
T 3bus_A 83 RDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTV 162 (273)
T ss_dssp SCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEE
T ss_pred cCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEE
Confidence 2358999998742 2357889999999999999999995 8999999999999999999999999
Q ss_pred EEEeccccCcC-------------cCCCCCCCChhHHHHHhhcCceEEee
Q 025071 200 VLHVALSRRAD-------------KYSANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 200 ii~v~~~~~~~-------------~y~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
++......... .+....+++.+++.++++++|+..+.
T Consensus 163 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 212 (273)
T 3bus_A 163 AIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTS 212 (273)
T ss_dssp EEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEE
T ss_pred EEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEE
Confidence 98754321100 11244567899999999999976554
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.79 E-value=1.1e-18 Score=152.37 Aligned_cols=122 Identities=21% Similarity=0.282 Sum_probs=96.9
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEec-c
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSN-V 175 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~-~ 175 (258)
...++.+|||||||+|..+..+++.+. +|+|+|+++. ...++++|++++||++++||+|+++ +
T Consensus 34 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~ 112 (260)
T 1vl5_A 34 ALKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIA 112 (260)
T ss_dssp TCCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESC
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhh
Confidence 356788999999999999999988764 8999998742 1357889999999999999999996 8
Q ss_pred ccccCChHHHHHHHHhcccCCcEEEEEeccccCcC-------------cCCCCCCCChhHHHHHhhcCceEE
Q 025071 176 FDHALYPWKFVGEIERTLKPAGVCVLHVALSRRAD-------------KYSANDLFSVKPLVKLFRESELVA 234 (258)
Q Consensus 176 l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~-------------~y~~~~~~s~~~l~~lf~~~~~~~ 234 (258)
++|+.++..+++|+.|+|||||++++......... .......++.+++.+++.+.|+..
T Consensus 113 l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 184 (260)
T 1vl5_A 113 AHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFEL 184 (260)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEE
T ss_pred hHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeE
Confidence 99999999999999999999999998743221110 001234568899999999888754
No 4
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.78 E-value=5.5e-19 Score=153.31 Aligned_cols=133 Identities=18% Similarity=0.268 Sum_probs=103.6
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC-------------CCceeeecCCCCCCCCCCee
Q 025071 104 FQDLKQRHFLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR-------------PPLVIKGDFHAQPFDNGTFD 169 (258)
Q Consensus 104 ~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~-------------~~~~~~aDa~~LPf~d~SFD 169 (258)
.+.+++...+.++.+|||||||+|..+..+++. + .+|+|+|+++. ...++++|+.++|+++++||
T Consensus 44 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD 122 (266)
T 3ujc_A 44 TKKILSDIELNENSKVLDIGSGLGGGCMYINEKYG-AHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFD 122 (266)
T ss_dssp HHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEE
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEE
Confidence 344444445667889999999999999999875 5 48999998742 23578899999999999999
Q ss_pred EEEec-ccccc--CChHHHHHHHHhcccCCcEEEEEeccccCcCcC----------CCCCCCChhHHHHHhhcCceEEee
Q 025071 170 FEFSN-VFDHA--LYPWKFVGEIERTLKPAGVCVLHVALSRRADKY----------SANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 170 ~V~s~-~l~h~--~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y----------~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
+|++. +++|+ .++..+++++.|+|||||++++..........+ ....+++.+++.++++++|+..+.
T Consensus 123 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 202 (266)
T 3ujc_A 123 LIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVV 202 (266)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred EEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEE
Confidence 99995 89999 788999999999999999999986432210000 123457899999999999986655
Q ss_pred e
Q 025071 237 K 237 (258)
Q Consensus 237 ~ 237 (258)
.
T Consensus 203 ~ 203 (266)
T 3ujc_A 203 S 203 (266)
T ss_dssp E
T ss_pred E
Confidence 3
No 5
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.78 E-value=8.2e-19 Score=150.02 Aligned_cols=121 Identities=15% Similarity=0.114 Sum_probs=97.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-----------CCceeeecCCCCCCCCCCeeEEEec-cccccCC
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-----------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHALY 181 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-----------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~ 181 (258)
.++.+|||||||+|..+..+++.+. +|+|+|+++. ...++++|++++ +++++||+|++. +++|+.+
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~ 118 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHIDD 118 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCSS
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhcC
Confidence 3677899999999999999988775 7999999742 345788899888 578999999995 8999999
Q ss_pred hHHHHHHHH-hcccCCcEEEEEeccccCc--------------C-------cCCCCCCCChhHHHHHhhcCceEEee
Q 025071 182 PWKFVGEIE-RTLKPAGVCVLHVALSRRA--------------D-------KYSANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 182 p~~~l~Ei~-RVLKPGG~lii~v~~~~~~--------------~-------~y~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
+..+++|+. |+|||||++++.++..... . .......++.+++.++++++|+..+.
T Consensus 119 ~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 195 (250)
T 2p7i_A 119 PVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTY 195 (250)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEE
Confidence 999999999 9999999999987643210 0 01122457999999999999976544
No 6
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.78 E-value=2.7e-18 Score=152.19 Aligned_cols=121 Identities=16% Similarity=0.130 Sum_probs=96.9
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCC-CCCCCeeEEEec-c
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQP-FDNGTFDFEFSN-V 175 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LP-f~d~SFD~V~s~-~ 175 (258)
.++.+|||||||+|..+..+++.|. +|+|+|+++. ...++++|+.++| +.+++||+|++. +
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 3467999999999999999998875 8999999741 1247889999998 899999999995 8
Q ss_pred ccccCChHHHHHHHHhcccCCcEEEEEeccccC----------------------cCcCCCCCCCChhHHHHHhhcCceE
Q 025071 176 FDHALYPWKFVGEIERTLKPAGVCVLHVALSRR----------------------ADKYSANDLFSVKPLVKLFRESELV 233 (258)
Q Consensus 176 l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~----------------------~~~y~~~~~~s~~~l~~lf~~~~~~ 233 (258)
++|+.++..+++|+.|+|||||++++....... .........++.+++.++++++|+.
T Consensus 146 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 225 (285)
T 4htf_A 146 LEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQ 225 (285)
T ss_dssp GGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCE
T ss_pred hhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCc
Confidence 999999999999999999999999998643210 0011223457899999999999976
Q ss_pred Ee
Q 025071 234 AV 235 (258)
Q Consensus 234 ~v 235 (258)
.+
T Consensus 226 v~ 227 (285)
T 4htf_A 226 IM 227 (285)
T ss_dssp EE
T ss_pred ee
Confidence 44
No 7
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.78 E-value=1.6e-17 Score=140.94 Aligned_cols=129 Identities=16% Similarity=0.134 Sum_probs=105.5
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCCCCCeeEEEec-cccccCChHHHHHHHHh
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFDNGTFDFEFSN-VFDHALYPWKFVGEIER 191 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~p~~~l~Ei~R 191 (258)
..++.+|||||||+|..+..++ .+++|+|+++....+.++|+.++|+++++||+|++. +++ ..++..+++|+.|
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~ 139 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSIR----NPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLM-GTNIRDFLEEANR 139 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHCC----SCEEEEESSCSSTTEEESCTTSCSCCTTCEEEEEEESCCC-SSCHHHHHHHHHH
T ss_pred cCCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCCCceEEEeccccCCCCCCCEeEEEEehhcc-ccCHHHHHHHHHH
Confidence 3567899999999999987773 479999999877778999999999999999999996 664 5889999999999
Q ss_pred cccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEeeeecCCCCeEEEEEEeCCcC
Q 025071 192 TLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVRKVDGFGLDTEVVFRKKKKK 255 (258)
Q Consensus 192 VLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~~v~g~~l~~~~~f~K~~~~ 255 (258)
+|||||.+++..... ...+.+++.+++++.|+..+......+....++++|.++.
T Consensus 140 ~L~~gG~l~i~~~~~---------~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k~~~~ 194 (215)
T 2zfu_A 140 VLKPGGLLKVAEVSS---------RFEDVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKTGPP 194 (215)
T ss_dssp HEEEEEEEEEEECGG---------GCSCHHHHHHHHHHTTEEEEEEECCSTTCEEEEEEECSSC
T ss_pred hCCCCeEEEEEEcCC---------CCCCHHHHHHHHHHCCCEEEEEecCCCeEEEEEEEecCcc
Confidence 999999999975421 1237899999999999877665444445578999996654
No 8
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.77 E-value=6.2e-18 Score=142.05 Aligned_cols=122 Identities=9% Similarity=0.073 Sum_probs=98.9
Q ss_pred CCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------CCceeeecCCCCCCCCCCeeEEEec-cccccC--Ch
Q 025071 116 ESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHAL--YP 182 (258)
Q Consensus 116 ~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~--~p 182 (258)
+.+|||+|||+|..+..|++.|. +++|+|+++. ...++++|+.++|+++++||+|++. +++|+. ++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 120 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGEL 120 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTH
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHH
Confidence 67999999999999999998875 8999999752 3457889999999999999999995 889986 88
Q ss_pred HHHHHHHHhcccCCcEEEEEeccccCcCcC----CCCCCCChhHHHHHhhcCceEEeeee
Q 025071 183 WKFVGEIERTLKPAGVCVLHVALSRRADKY----SANDLFSVKPLVKLFRESELVAVRKV 238 (258)
Q Consensus 183 ~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y----~~~~~~s~~~l~~lf~~~~~~~v~~v 238 (258)
..+++++.|+|||||++++.+........+ .....++.+++.+++++.|+..+...
T Consensus 121 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 180 (203)
T 3h2b_A 121 PDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSH 180 (203)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEE
Confidence 999999999999999999986543221111 12234789999999999997655433
No 9
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.77 E-value=1.9e-18 Score=147.31 Aligned_cols=120 Identities=14% Similarity=0.051 Sum_probs=89.3
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------------------CCceeeecCCCCCCC
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------------------PPLVIKGDFHAQPFD 164 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------------------~~~~~~aDa~~LPf~ 164 (258)
.+.++.+|||+|||+|..+..|++.|+ +|+|+|+|+. ...++++|+.++|++
T Consensus 19 ~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 19 NVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred ccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 456788999999999999999998886 8999998731 234788999999998
Q ss_pred C-CCeeEEEec-cccccCCh--HHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceE
Q 025071 165 N-GTFDFEFSN-VFDHALYP--WKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELV 233 (258)
Q Consensus 165 d-~SFD~V~s~-~l~h~~~p--~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~ 233 (258)
+ ++||+|++. +++|+..+ ..+++|++|+|||||++++.+..............++.+++.++|.+ |+.
T Consensus 98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~ 169 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWE 169 (203)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEE
T ss_pred cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcE
Confidence 7 899999985 77777633 45889999999999985444322111100011122588999999997 653
No 10
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.77 E-value=4e-18 Score=147.84 Aligned_cols=131 Identities=18% Similarity=0.118 Sum_probs=100.6
Q ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCe
Q 025071 105 QDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTF 168 (258)
Q Consensus 105 ~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SF 168 (258)
+.+++...+.++.+|||||||+|..+..+++....+|+|+|+++. ...++++|++++|+ +++|
T Consensus 26 ~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~f 104 (256)
T 1nkv_A 26 ATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKC 104 (256)
T ss_dssp HHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCE
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCC
Confidence 334444456788999999999999999888752248999998741 23578899999999 8999
Q ss_pred eEEEec-cccccCChHHHHHHHHhcccCCcEEEEEeccccCcC----------cCCCCCCCChhHHHHHhhcCceEEee
Q 025071 169 DFEFSN-VFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRAD----------KYSANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 169 D~V~s~-~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~----------~y~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
|+|++. +++|+.++..+++|+.|+|||||++++..+...... ......+++..++.++++++|+..+.
T Consensus 105 D~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 183 (256)
T 1nkv_A 105 DVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVE 183 (256)
T ss_dssp EEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCE
T ss_pred CEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEE
Confidence 999994 889999999999999999999999999754321110 11123567889999999999976544
No 11
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.77 E-value=4.1e-18 Score=139.34 Aligned_cols=137 Identities=13% Similarity=0.133 Sum_probs=106.1
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------CCceeeecCCCCCCCCCCeeEEEec-cccccCC
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHALY 181 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~ 181 (258)
+.++.+|||+|||+|..+..+++.+. +++|+|+++. ...+..+| +|+++++||+|+++ +++|+.+
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~~~ 90 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANSFHDMDD 90 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESCSTTCSC
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccchhcccC
Confidence 45778999999999999999998764 8999998742 23456666 89999999999995 8999999
Q ss_pred hHHHHHHHHhcccCCcEEEEEeccccCcC-cCCCCCCCChhHHHHHhhcCceEEeeeecCCCCeEEEEEEeCCcC
Q 025071 182 PWKFVGEIERTLKPAGVCVLHVALSRRAD-KYSANDLFSVKPLVKLFRESELVAVRKVDGFGLDTEVVFRKKKKK 255 (258)
Q Consensus 182 p~~~l~Ei~RVLKPGG~lii~v~~~~~~~-~y~~~~~~s~~~l~~lf~~~~~~~v~~v~g~~l~~~~~f~K~~~~ 255 (258)
+..+++|+.|+|||||++++......... .......++.+++.++++ |+..+...+-....-.++|+|++..
T Consensus 91 ~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~~~~~l~~~~~~~~ 163 (170)
T 3i9f_A 91 KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPTPYHFGLVLKRKTSE 163 (170)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSSTTEEEEEEEECCCC
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCCCCceEEEEEecCCCC
Confidence 99999999999999999998754322111 112234578999999999 8877666654445567888886543
No 12
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.77 E-value=1.4e-18 Score=154.91 Aligned_cols=88 Identities=16% Similarity=0.114 Sum_probs=76.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------CCceeeecCCCCCCCCCCeeEEEec-cccccCChH
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHALYPW 183 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~p~ 183 (258)
..+.+|||||||+|..+..|++.|. +|+|+|+|+. ...++++|++++||++++||+|++. ++ |+.++.
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~~~~~ 115 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAM-HWFDLD 115 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCC-TTCCHH
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeeh-hHhhHH
Confidence 4567999999999999999998874 8999998742 2357899999999999999999996 66 555799
Q ss_pred HHHHHHHhcccCCcEEEEEe
Q 025071 184 KFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 184 ~~l~Ei~RVLKPGG~lii~v 203 (258)
++++|++|||||||++++..
T Consensus 116 ~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 116 RFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEE
Confidence 99999999999999998864
No 13
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.77 E-value=4.3e-18 Score=144.45 Aligned_cols=138 Identities=16% Similarity=0.153 Sum_probs=104.4
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-----------CCceeeecCCCCCCCCCCeeEEEec-cccccCC
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-----------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHALY 181 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-----------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~ 181 (258)
.++.+|||+|||+|..+..+++.+. +++|+|+++. ...+.++|+.++|++ ++||+|++. +++|+.+
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~ 121 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLTD 121 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESCGGGSCH
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcchhcCCh
Confidence 3678999999999999999988875 8999998752 346789999999999 999999995 8999998
Q ss_pred hHH--HHHHHHhcccCCcEEEEEeccccCcC------------cC-------CCCCCCChhHHHHHhhcCceEEeeeecC
Q 025071 182 PWK--FVGEIERTLKPAGVCVLHVALSRRAD------------KY-------SANDLFSVKPLVKLFRESELVAVRKVDG 240 (258)
Q Consensus 182 p~~--~l~Ei~RVLKPGG~lii~v~~~~~~~------------~y-------~~~~~~s~~~l~~lf~~~~~~~v~~v~g 240 (258)
+.. +++|+.|+|||||.+++..+...... .| ....+++.+++.++++++|+..+ .+..
T Consensus 122 ~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~-~~~~ 200 (220)
T 3hnr_A 122 DEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVT-FTRL 200 (220)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEE-EEEC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEE-Eeec
Confidence 877 99999999999999999864321100 11 11234588999999999998533 3333
Q ss_pred CCCeEEEEEEeCCc
Q 025071 241 FGLDTEVVFRKKKK 254 (258)
Q Consensus 241 ~~l~~~~~f~K~~~ 254 (258)
.+..=.+..+|..+
T Consensus 201 ~~~~w~~~~~~~~~ 214 (220)
T 3hnr_A 201 NHFVWVMEATKQLE 214 (220)
T ss_dssp SSSEEEEEEEECSC
T ss_pred cceEEEEeehhhhh
Confidence 34433555565443
No 14
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.76 E-value=4.9e-18 Score=151.08 Aligned_cols=125 Identities=27% Similarity=0.376 Sum_probs=100.9
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEec
Q 025071 112 FLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSN 174 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~ 174 (258)
.+.++.+|||||||+|..+..+++. |. +|+|+|+++. ...++++|+.++||++++||+|++.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 157 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQ 157 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEec
Confidence 5678889999999999999998875 64 8999999742 2357889999999999999999995
Q ss_pred -cccccCChHHHHHHHHhcccCCcEEEEEeccccCcC----------cCCCCCCCChhHHHHHhhcCceEEeee
Q 025071 175 -VFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRAD----------KYSANDLFSVKPLVKLFRESELVAVRK 237 (258)
Q Consensus 175 -~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~----------~y~~~~~~s~~~l~~lf~~~~~~~v~~ 237 (258)
+++|+.++..+++|+.|+|||||++++..+...... .+....+.+.+++.+++.++|+..+..
T Consensus 158 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 231 (297)
T 2o57_A 158 DAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRT 231 (297)
T ss_dssp SCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEE
T ss_pred chhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 899999999999999999999999999865322110 112234568899999999999876544
No 15
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.76 E-value=1.5e-18 Score=153.59 Aligned_cols=123 Identities=16% Similarity=0.142 Sum_probs=97.9
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------CCceeeecCCCCCCCCCCeeEEEec-cccccC
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHAL 180 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~ 180 (258)
...++.+|||||||+|..+..+++.+ .+|+|+|+++. ...+.++|++++|+ +++||+|+++ +++|+.
T Consensus 54 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~ 131 (279)
T 3ccf_A 54 NPQPGEFILDLGCGTGQLTEKIAQSG-AEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNAMLHWVK 131 (279)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEESCGGGCS
T ss_pred CCCCCCEEEEecCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcchhhhCc
Confidence 35677899999999999999998865 48999999752 34578999999998 6899999995 899999
Q ss_pred ChHHHHHHHHhcccCCcEEEEEeccccCcC-------------c-----C-CCCCCCChhHHHHHhhcCceEEee
Q 025071 181 YPWKFVGEIERTLKPAGVCVLHVALSRRAD-------------K-----Y-SANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 181 ~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~-------------~-----y-~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
++..+++|+.|+|||||++++.++...... . + ....+++.+++.++++++|+..+.
T Consensus 132 d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 206 (279)
T 3ccf_A 132 EPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTY 206 (279)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEE
T ss_pred CHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEE
Confidence 999999999999999999998765321100 0 0 112356889999999999876543
No 16
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.75 E-value=1.3e-17 Score=144.57 Aligned_cols=125 Identities=22% Similarity=0.224 Sum_probs=100.1
Q ss_pred cCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEec-
Q 025071 111 HFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSN- 174 (258)
Q Consensus 111 ~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~- 174 (258)
..+.++.+|||||||+|..+..+++.+. +|+|+|+++. ...+.++|++++|+++++||+|++.
T Consensus 17 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 95 (239)
T 1xxl_A 17 AECRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRY 95 (239)
T ss_dssp HTCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEES
T ss_pred hCcCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECC
Confidence 3567889999999999999999988764 8999998742 2346889999999999999999996
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEEeccccCcC-------------cCCCCCCCChhHHHHHhhcCceEEee
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRAD-------------KYSANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~-------------~y~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
+++|+.++..+++|+.|+|||||++++......... .......++.+++.++++++|+..+.
T Consensus 96 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~ 170 (239)
T 1xxl_A 96 AAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQD 170 (239)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEE
T ss_pred chhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEE
Confidence 899999999999999999999999998744221110 01112446889999999999986544
No 17
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.75 E-value=1.5e-17 Score=142.75 Aligned_cols=124 Identities=22% Similarity=0.352 Sum_probs=99.8
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC------------CCceeeecCCCCCCCCCCeeEEEec-ccccc
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR------------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHA 179 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~ 179 (258)
+.++.+|||||||+|..+..+++.|. +|+|+|+++. ...++++|+.++|+++++||+|++. +++|+
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 129 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWT 129 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhc
Confidence 45788999999999999999998875 8999998642 2357889999999999999999995 89999
Q ss_pred CChHHHHHHHHhcccCCcEEEEEeccccCc---C----cC---CCCCCCChhHHHHHhhcCceEEeee
Q 025071 180 LYPWKFVGEIERTLKPAGVCVLHVALSRRA---D----KY---SANDLFSVKPLVKLFRESELVAVRK 237 (258)
Q Consensus 180 ~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~---~----~y---~~~~~~s~~~l~~lf~~~~~~~v~~ 237 (258)
.++..+++++.|+|||||++++........ . .+ .....++..++.+++.++|+..+..
T Consensus 130 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 130 EEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred cCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe
Confidence 999999999999999999999986432110 0 11 1223468899999999999765543
No 18
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.75 E-value=1.3e-17 Score=144.80 Aligned_cols=125 Identities=15% Similarity=0.208 Sum_probs=99.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC------------CCceeeecCCCCCCCCCCeeEEEec-cccccC
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR------------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHAL 180 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~ 180 (258)
.++.+|||||||+|..+..+++.|..+|+|+|+++. ...++++|+..+|+++++||+|++. +++|+.
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 122 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIA 122 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhh
Confidence 367899999999999999999887668999998742 2357889999999999999999995 899999
Q ss_pred ChHHHHHHHHhcccCCcEEEEEecccc---C----------c-------CcCCC------------CC--CCChhHHHHH
Q 025071 181 YPWKFVGEIERTLKPAGVCVLHVALSR---R----------A-------DKYSA------------ND--LFSVKPLVKL 226 (258)
Q Consensus 181 ~p~~~l~Ei~RVLKPGG~lii~v~~~~---~----------~-------~~y~~------------~~--~~s~~~l~~l 226 (258)
++..+++++.|+|||||++++.++... . . ..|-. .. .++.+++.++
T Consensus 123 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 202 (253)
T 3g5l_A 123 SFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYIQT 202 (253)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHHHHHHH
Confidence 999999999999999999999754320 0 0 00000 00 1288999999
Q ss_pred hhcCceEEeeee
Q 025071 227 FRESELVAVRKV 238 (258)
Q Consensus 227 f~~~~~~~v~~v 238 (258)
++++|+..+...
T Consensus 203 l~~aGF~~~~~~ 214 (253)
T 3g5l_A 203 LLKNGFQINSVI 214 (253)
T ss_dssp HHHTTEEEEEEE
T ss_pred HHHcCCeeeeee
Confidence 999998765544
No 19
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.75 E-value=3.5e-17 Score=143.12 Aligned_cols=142 Identities=13% Similarity=0.057 Sum_probs=105.3
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------CCceeeecCCCCCCCCCCeeEEEec--cccccC
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------PPLVIKGDFHAQPFDNGTFDFEFSN--VFDHAL 180 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------~~~~~~aDa~~LPf~d~SFD~V~s~--~l~h~~ 180 (258)
+.++.+|||||||+|..+..|++.|. +|+|+|+++. ...++++|+.++|+ +++||+|++. +++|+.
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSC
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcC
Confidence 34678999999999999999988874 7999999752 34578999999999 7899999984 888886
Q ss_pred ---ChHHHHHHHHhcccCCcEEEEEeccccC-------------------------------------------cCcC--
Q 025071 181 ---YPWKFVGEIERTLKPAGVCVLHVALSRR-------------------------------------------ADKY-- 212 (258)
Q Consensus 181 ---~p~~~l~Ei~RVLKPGG~lii~v~~~~~-------------------------------------------~~~y-- 212 (258)
+...+++++.|+|||||++++....... ...+
T Consensus 126 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITH 205 (263)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEEE
Confidence 4557899999999999999985211000 0000
Q ss_pred ----CCCCCCChhHHHHHhhcCceEEeeeecCCCCeEEEEEEeCCcCC
Q 025071 213 ----SANDLFSVKPLVKLFRESELVAVRKVDGFGLDTEVVFRKKKKKS 256 (258)
Q Consensus 213 ----~~~~~~s~~~l~~lf~~~~~~~v~~v~g~~l~~~~~f~K~~~~~ 256 (258)
.....|+.+++.++++++|+..+......+....++-+|+...+
T Consensus 206 ~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K~a~~~ 253 (263)
T 3pfg_A 206 HEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLPGAKGE 253 (263)
T ss_dssp EEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEECC---
T ss_pred EEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEecCCCCc
Confidence 01235789999999999999766655444555678888865543
No 20
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.74 E-value=3.6e-17 Score=141.90 Aligned_cols=126 Identities=18% Similarity=0.208 Sum_probs=99.5
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEec-
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSN- 174 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~- 174 (258)
.+.++.+|||||||+|..+..+++.+..+|+|+|+++. ...++++|+.++|+++++||+|+++
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEG 122 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecC
Confidence 35677899999999999999998875458999999742 1357889999999999999999995
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEEeccccCcC-------cC--CCCCCCChhHHHHHhhcCceEEeeee
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRAD-------KY--SANDLFSVKPLVKLFRESELVAVRKV 238 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~-------~y--~~~~~~s~~~l~~lf~~~~~~~v~~v 238 (258)
+++|+ ++..+++++.|+|||||++++..+...... .+ ....+.+.+++.+++++.|+..+...
T Consensus 123 ~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (257)
T 3f4k_A 123 AIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAHF 194 (257)
T ss_dssp CSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEEE
T ss_pred hHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 78888 899999999999999999999864311110 00 11235688999999999998766643
No 21
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.74 E-value=2.4e-17 Score=144.70 Aligned_cols=125 Identities=17% Similarity=0.197 Sum_probs=99.8
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEec-c
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSN-V 175 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~-~ 175 (258)
+.++.+|||||||+|..+..+++.+..+|+|+|+++. ...++++|+.++|+++++||+|++. +
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCC
Confidence 5678899999999999999999876568999999742 1457899999999999999999995 7
Q ss_pred ccccCChHHHHHHHHhcccCCcEEEEEeccccCcCc-------C--CCCCCCChhHHHHHhhcCceEEeeee
Q 025071 176 FDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADK-------Y--SANDLFSVKPLVKLFRESELVAVRKV 238 (258)
Q Consensus 176 l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~-------y--~~~~~~s~~~l~~lf~~~~~~~v~~v 238 (258)
++|+ ++..+++++.|+|||||++++.......... + ....+++..++.++++++|+..+...
T Consensus 124 ~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (267)
T 3kkz_A 124 IYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVATF 194 (267)
T ss_dssp GGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEE
T ss_pred ceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 8888 8999999999999999999997543111100 0 11245688999999999998766543
No 22
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.73 E-value=3.3e-17 Score=138.37 Aligned_cols=112 Identities=18% Similarity=0.217 Sum_probs=92.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------CCceeeecCCCCCCCCCCeeEEEec-cccccCCh
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHALYP 182 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~p 182 (258)
.++.+|||+|||+|..+..+ +..+++|+|+++. ...++++|+.++|+++++||+|++. +++|+.++
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 111 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDV 111 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCH
T ss_pred CCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCH
Confidence 47889999999999998877 5448999998742 3457889999999999999999995 89999999
Q ss_pred HHHHHHHHhcccCCcEEEEEeccccC------------c-CcCCCCCCCChhHHHHHhh
Q 025071 183 WKFVGEIERTLKPAGVCVLHVALSRR------------A-DKYSANDLFSVKPLVKLFR 228 (258)
Q Consensus 183 ~~~l~Ei~RVLKPGG~lii~v~~~~~------------~-~~y~~~~~~s~~~l~~lf~ 228 (258)
..+++|+.|+|||||.+++.++.... + ..+...++++.+++.++++
T Consensus 112 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~ 170 (211)
T 2gs9_A 112 ERVLLEARRVLRPGGALVVGVLEALSPWAALYRRLGEKGVLPWAQARFLAREDLKALLG 170 (211)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHHHhhccCccccccccCCHHHHHHHhc
Confidence 99999999999999999998654311 0 0123355689999999999
No 23
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.73 E-value=5e-18 Score=142.65 Aligned_cols=140 Identities=16% Similarity=0.129 Sum_probs=102.2
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEec-
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSN- 174 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~- 174 (258)
...++ +|||+|||+|..+..+++.+..+++|+|+++. ...+.++|+.++|+++++||+|+++
T Consensus 41 ~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 119 (219)
T 3dlc_A 41 GITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRG 119 (219)
T ss_dssp CCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEES
T ss_pred CCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECc
Confidence 34444 99999999999999998763348999998641 2357889999999999999999995
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEEeccccCc-------------CcC-----CCCCCCChhHHHHHhhcCceEEee
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRA-------------DKY-----SANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~-------------~~y-----~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
+++|+.++..+++++.|+|||||.+++........ ..+ .....++.+++.++++++|+..+.
T Consensus 120 ~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 199 (219)
T 3dlc_A 120 SVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYE 199 (219)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEE
T ss_pred hHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEE
Confidence 89999999999999999999999999874322100 000 112234678999999999986555
Q ss_pred eecCCCCeEEEEEEeCC
Q 025071 237 KVDGFGLDTEVVFRKKK 253 (258)
Q Consensus 237 ~v~g~~l~~~~~f~K~~ 253 (258)
......- .-++++|+.
T Consensus 200 ~~~~~~~-~~~~~~k~~ 215 (219)
T 3dlc_A 200 IILGDEG-FWIIISKTD 215 (219)
T ss_dssp EEEETTE-EEEEEBCCS
T ss_pred EEecCCc-eEEEEeccc
Confidence 4422121 245666643
No 24
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.73 E-value=2.9e-17 Score=146.45 Aligned_cols=141 Identities=19% Similarity=0.221 Sum_probs=100.4
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcC---CCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEE
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVG---VSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEF 172 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g---~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~ 172 (258)
.++++.+|||||||+|..+..|++.. ..+|+|+|+|+. ...++++|+.++|++ +||+|+
T Consensus 67 ~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~ 144 (261)
T 4gek_A 67 FVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVV 144 (261)
T ss_dssp HCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEE
T ss_pred hCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccce
Confidence 46789999999999999999887641 237999999742 234788999999985 599999
Q ss_pred ec-cccccCCh--HHHHHHHHhcccCCcEEEEEeccccCc-----------------CcCCCC-------------CCCC
Q 025071 173 SN-VFDHALYP--WKFVGEIERTLKPAGVCVLHVALSRRA-----------------DKYSAN-------------DLFS 219 (258)
Q Consensus 173 s~-~l~h~~~p--~~~l~Ei~RVLKPGG~lii~v~~~~~~-----------------~~y~~~-------------~~~s 219 (258)
++ +++|+..+ ..+++||+|+|||||++++........ ..|+.. ..++
T Consensus 145 ~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s 224 (261)
T 4gek_A 145 LNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDS 224 (261)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBC
T ss_pred eeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCC
Confidence 96 78887644 357999999999999999864321100 012111 1257
Q ss_pred hhHHHHHhhcCceEEeeee-cCCCCeEEEEEEeCCcC
Q 025071 220 VKPLVKLFRESELVAVRKV-DGFGLDTEVVFRKKKKK 255 (258)
Q Consensus 220 ~~~l~~lf~~~~~~~v~~v-~g~~l~~~~~f~K~~~~ 255 (258)
.+++.++++++|+.++..+ ..+.. ..++-+|..+.
T Consensus 225 ~~~~~~~L~~AGF~~ve~~fq~~nF-~~~iA~K~~~~ 260 (261)
T 4gek_A 225 VETHKARLHKAGFEHSELWFQCFNF-GSLVALKAEDA 260 (261)
T ss_dssp HHHHHHHHHHHTCSEEEEEEEETTE-EEEEEECCTTC
T ss_pred HHHHHHHHHHcCCCeEEEEEEeccE-EEEEEEEcCCC
Confidence 7889999999998776643 23333 45667776554
No 25
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.73 E-value=3.5e-17 Score=147.58 Aligned_cols=123 Identities=15% Similarity=0.126 Sum_probs=98.2
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEec-
Q 025071 113 LFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSN- 174 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~- 174 (258)
+.++.+|||||||+|..+..+++. |. +|+|+|+++. ...++++|+.++|+++++||+|++.
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE 193 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECC
Confidence 567889999999999999999876 64 7999998742 2357899999999999999999995
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEEeccccCcC-----------cCCCCCCCChhHHHHHhhcCceEEeee
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRAD-----------KYSANDLFSVKPLVKLFRESELVAVRK 237 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~-----------~y~~~~~~s~~~l~~lf~~~~~~~v~~ 237 (258)
+++|+ ++..+++|+.|+|||||++++......... .+....+++.+++.++++++|+..+..
T Consensus 194 ~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~ 266 (312)
T 3vc1_A 194 STMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTI 266 (312)
T ss_dssp CGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEE
T ss_pred chhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEE
Confidence 78888 699999999999999999998764322110 011224578999999999999865543
No 26
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.73 E-value=1.3e-17 Score=144.17 Aligned_cols=123 Identities=16% Similarity=0.178 Sum_probs=97.9
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-------CCceeeecCCCC--CCCCCCeeEEEec-cccccCCh
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-------PPLVIKGDFHAQ--PFDNGTFDFEFSN-VFDHALYP 182 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-------~~~~~~aDa~~L--Pf~d~SFD~V~s~-~l~h~~~p 182 (258)
+.++.+|||||||+|..+..+++.|. +|+|+|+++. ...++.+|+.++ |+++++||+|++. +++|+.++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~ 117 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGKFNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPE 117 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTTSEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGG
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhhcceeeccHHHHhhhcCCCCeeEEEECCchhhCCcH
Confidence 45778999999999999999988875 7999999753 245677888775 8999999999995 89999966
Q ss_pred --HHHHHHHHhcccCCcEEEEEeccccCc----CcC---CCCCCCChhHHHHHhhcCceEEee
Q 025071 183 --WKFVGEIERTLKPAGVCVLHVALSRRA----DKY---SANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 183 --~~~l~Ei~RVLKPGG~lii~v~~~~~~----~~y---~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
..+++++.|+|||||++++.++..... ..| .....++.+++.++++++|+..+.
T Consensus 118 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~ 180 (240)
T 3dli_A 118 RLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVK 180 (240)
T ss_dssp GHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEE
Confidence 899999999999999999987643211 011 223457889999999999876544
No 27
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.73 E-value=5.9e-17 Score=137.81 Aligned_cols=137 Identities=16% Similarity=0.127 Sum_probs=98.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCC-CcEEEEeCCCC--------------------CCceeeecCCCCCCCCCCeeEEE
Q 025071 114 FNESKALSIGARVGQEVAALKLVGV-SDSIGIDLVPR--------------------PPLVIKGDFHAQPFDNGTFDFEF 172 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~-~~v~GvD~s~~--------------------~~~~~~aDa~~LPf~d~SFD~V~ 172 (258)
.++.+|||||||+|..+..+++.+. .+++|+|+++. ...+.++|+..+++++++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 3578999999999999999988653 58999998741 23578889999999999999999
Q ss_pred ec-cccccCCh--HHHHHHHHhcccCCcEEEEEeccccCcCcC-----------CCCCCCChhHHH----HHhhcCceE-
Q 025071 173 SN-VFDHALYP--WKFVGEIERTLKPAGVCVLHVALSRRADKY-----------SANDLFSVKPLV----KLFRESELV- 233 (258)
Q Consensus 173 s~-~l~h~~~p--~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y-----------~~~~~~s~~~l~----~lf~~~~~~- 233 (258)
+. +++|+.++ ..+++++.|+|||||.++.. +.......+ .....++.+++. +++++.|+.
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v 186 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST-PNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSV 186 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE-EBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEE
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc-cchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEE
Confidence 95 89999877 58899999999999965554 322211111 111225888888 667777763
Q ss_pred Eeeee----cCCCCe-EEEEEEe
Q 025071 234 AVRKV----DGFGLD-TEVVFRK 251 (258)
Q Consensus 234 ~v~~v----~g~~l~-~~~~f~K 251 (258)
.+..+ ...+.. +..+|+|
T Consensus 187 ~~~~~g~~~~~~g~~~qi~~~~~ 209 (219)
T 3jwg_A 187 RFLQIGEIDDEFGSPTQMGVFTL 209 (219)
T ss_dssp EEEEESCCCTTSCCSEEEEEEEE
T ss_pred EEEecCCccccCCCCeEEEEEec
Confidence 22222 122222 6999998
No 28
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.72 E-value=3.4e-17 Score=143.87 Aligned_cols=122 Identities=20% Similarity=0.083 Sum_probs=94.6
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------CCceeeecCCCCCCCCCCeeEEEec-cccccCC
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHALY 181 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~ 181 (258)
...++.+|||||||+|..+..+++.+ .+|+|+|+++. ...++++|++++|+++++||+|++. +++|+.+
T Consensus 31 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 109 (261)
T 3ege_A 31 NLPKGSVIADIGAGTGGYSVALANQG-LFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILAIHHFSH 109 (261)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHTTT-CEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESCGGGCSS
T ss_pred CCCCCCEEEEEcCcccHHHHHHHhCC-CEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcchHhhccC
Confidence 35678899999999999999999866 48999999742 2357889999999999999999995 7999999
Q ss_pred hHHHHHHHHhcccCCcEEEEEeccccCcC-cC-----------CCCCCCChhHHHHHhhcCceEEee
Q 025071 182 PWKFVGEIERTLKPAGVCVLHVALSRRAD-KY-----------SANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 182 p~~~l~Ei~RVLKPGG~lii~v~~~~~~~-~y-----------~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
+..+++|++|+|| ||++++......... .+ ....+++.+++. +++++|+..+.
T Consensus 110 ~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~ 174 (261)
T 3ege_A 110 LEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVE 174 (261)
T ss_dssp HHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEE
T ss_pred HHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCcee
Confidence 9999999999999 997777644321111 11 012344667788 99988875443
No 29
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.72 E-value=8.3e-17 Score=137.97 Aligned_cols=125 Identities=14% Similarity=0.154 Sum_probs=96.9
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCC-------------CCceeeecCCCCCCCCCCeeEEEec-ccc
Q 025071 113 LFNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPR-------------PPLVIKGDFHAQPFDNGTFDFEFSN-VFD 177 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~-------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~ 177 (258)
..++.+|||||||+|..+..+++.. ..+++|+|+++. ...++++|+.++|++ ++||+|++. +++
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSALSIH 120 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEESCGG
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeCccc
Confidence 4567899999999999999998763 358999998742 235788999999998 899999995 889
Q ss_pred ccCChH--HHHHHHHhcccCCcEEEEEeccccCc-----------------------------CcCCCCCCCChhHHHHH
Q 025071 178 HALYPW--KFVGEIERTLKPAGVCVLHVALSRRA-----------------------------DKYSANDLFSVKPLVKL 226 (258)
Q Consensus 178 h~~~p~--~~l~Ei~RVLKPGG~lii~v~~~~~~-----------------------------~~y~~~~~~s~~~l~~l 226 (258)
|+.++. .+++|+.|+|||||++++........ ........++.+++.++
T Consensus 121 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 200 (234)
T 3dtn_A 121 HLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNW 200 (234)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHH
Confidence 987766 48999999999999999875322110 00122334688999999
Q ss_pred hhcCceEEeeee
Q 025071 227 FRESELVAVRKV 238 (258)
Q Consensus 227 f~~~~~~~v~~v 238 (258)
++++|+..+...
T Consensus 201 l~~aGF~~v~~~ 212 (234)
T 3dtn_A 201 LKEAGFRDVSCI 212 (234)
T ss_dssp HHHTTCEEEEEE
T ss_pred HHHcCCCceeee
Confidence 999999877655
No 30
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=2.2e-17 Score=143.21 Aligned_cols=128 Identities=16% Similarity=0.154 Sum_probs=99.1
Q ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC----------CCceeeecCCCCCCCCCCeeEEEe
Q 025071 105 QDLKQRHFLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR----------PPLVIKGDFHAQPFDNGTFDFEFS 173 (258)
Q Consensus 105 ~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~----------~~~~~~aDa~~LPf~d~SFD~V~s 173 (258)
..+++.....++.+|||||||+|..+..+++. +..+++|+|+++. ...+.++|++++| ++++||+|++
T Consensus 23 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~ 101 (259)
T 2p35_A 23 RDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYA 101 (259)
T ss_dssp HHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEE
T ss_pred HHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEE
Confidence 34444434567789999999999999988875 2348999999742 3457899999999 8899999999
Q ss_pred c-cccccCChHHHHHHHHhcccCCcEEEEEeccccCc------------CcC---------CCCCCCChhHHHHHhhcCc
Q 025071 174 N-VFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRA------------DKY---------SANDLFSVKPLVKLFRESE 231 (258)
Q Consensus 174 ~-~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~------------~~y---------~~~~~~s~~~l~~lf~~~~ 231 (258)
+ +++|+.++..+++++.|+|||||++++.++..... ..+ ....+++.+++.++++++|
T Consensus 102 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 181 (259)
T 2p35_A 102 NAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPKS 181 (259)
T ss_dssp ESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGGE
T ss_pred eCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhcC
Confidence 5 89999999999999999999999999986532110 001 1234578999999999999
Q ss_pred eE
Q 025071 232 LV 233 (258)
Q Consensus 232 ~~ 233 (258)
+.
T Consensus 182 f~ 183 (259)
T 2p35_A 182 SR 183 (259)
T ss_dssp EE
T ss_pred Cc
Confidence 83
No 31
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.72 E-value=1.7e-17 Score=143.41 Aligned_cols=133 Identities=17% Similarity=0.103 Sum_probs=99.7
Q ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-------------CCceeeecCCCCCCCCCCeeEEE
Q 025071 106 DLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-------------PPLVIKGDFHAQPFDNGTFDFEF 172 (258)
Q Consensus 106 ~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-------------~~~~~~aDa~~LPf~d~SFD~V~ 172 (258)
.+++.....++.+|||||||+|..+..+++.+...|+|+|+++. ...+.++|+..+|+++++||+|+
T Consensus 84 ~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 163 (254)
T 1xtp_A 84 NFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIV 163 (254)
T ss_dssp HHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEE
T ss_pred HHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEE
Confidence 34443334567899999999999999888776557999998642 13467889999999999999999
Q ss_pred ec-cccccC--ChHHHHHHHHhcccCCcEEEEEeccccCcCc----CCCCCCCChhHHHHHhhcCceEEeeee
Q 025071 173 SN-VFDHAL--YPWKFVGEIERTLKPAGVCVLHVALSRRADK----YSANDLFSVKPLVKLFRESELVAVRKV 238 (258)
Q Consensus 173 s~-~l~h~~--~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~----y~~~~~~s~~~l~~lf~~~~~~~v~~v 238 (258)
+. +++|+. ++..+++++.|+|||||++++..+....... ......++.+++.++++++|+..+...
T Consensus 164 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 236 (254)
T 1xtp_A 164 IQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEA 236 (254)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEE
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEee
Confidence 95 888984 4788999999999999999998653211110 111223688999999999987655443
No 32
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.72 E-value=2.1e-17 Score=139.79 Aligned_cols=123 Identities=21% Similarity=0.169 Sum_probs=97.5
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------CCceeeecCCCCCCCCCCeeEEEec-cccccC-
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHAL- 180 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~- 180 (258)
.+.++.+|||+|||+|..+..+++.|. +|+|+|+++. ...+.++|+..+| .+++||+|++. +++|+.
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~ 117 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRLGRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPR 117 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEECCGGGCC-CCSCEEEEEECSCGGGSCH
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhcCCceEEeeeccCC-CCCcEEEEEecCchhhcCH
Confidence 356788999999999999999998875 8999999753 3357889999999 89999999995 889988
Q ss_pred -ChHHHHHHHHhcccCCcEEEEEeccccCcC--cC-CCCCCCChhHHHHHhhcCc-eEEee
Q 025071 181 -YPWKFVGEIERTLKPAGVCVLHVALSRRAD--KY-SANDLFSVKPLVKLFRESE-LVAVR 236 (258)
Q Consensus 181 -~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~--~y-~~~~~~s~~~l~~lf~~~~-~~~v~ 236 (258)
++..+++++.|+|||||++++.++...... .. .....++.+++.++++++| +..+.
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~ 178 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVA 178 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEE
Confidence 777899999999999999999865432110 11 1234579999999999888 65433
No 33
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.71 E-value=2.1e-16 Score=133.11 Aligned_cols=119 Identities=12% Similarity=0.060 Sum_probs=94.7
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-----------CCceeeecCCCCCCCCCCeeEEEec-cccccC
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-----------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHAL 180 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-----------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~ 180 (258)
+.++.+|||||||+|..+..+++.|. +++|+|+++. ...++++|+.++ +++++||+|+++ +++|+.
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEechhhcCC
Confidence 56778999999999999999988775 8999998742 235788999988 889999999995 889998
Q ss_pred Ch--HHHHHHHHhcccCCcEEEEEeccccCc----------C-----------cC-CCCCCCChhHHHHHhhcCceE
Q 025071 181 YP--WKFVGEIERTLKPAGVCVLHVALSRRA----------D-----------KY-SANDLFSVKPLVKLFRESELV 233 (258)
Q Consensus 181 ~p--~~~l~Ei~RVLKPGG~lii~v~~~~~~----------~-----------~y-~~~~~~s~~~l~~lf~~~~~~ 233 (258)
++ ..+++++.|+|||||.+++........ . .| ....+++.+++.++++++|+.
T Consensus 122 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 198 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWS 198 (218)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCE
Confidence 86 788999999999999999875432110 0 00 012356889999999999986
No 34
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.71 E-value=1.5e-16 Score=132.19 Aligned_cols=122 Identities=19% Similarity=0.195 Sum_probs=94.1
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEec-cc
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSN-VF 176 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l 176 (258)
..++.+|||+|||+|..+..+++.|. +++|+|+++. ...+..+|+.++|+ +++||+|++. ++
T Consensus 30 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l 107 (199)
T 2xvm_A 30 VVKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVL 107 (199)
T ss_dssp TSCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCG
T ss_pred ccCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchh
Confidence 34677999999999999999988875 8999998742 23467889999999 8999999995 78
Q ss_pred cccC--ChHHHHHHHHhcccCCcEEEEEeccccCcCcC--CCCCCCChhHHHHHhhcCceEEee
Q 025071 177 DHAL--YPWKFVGEIERTLKPAGVCVLHVALSRRADKY--SANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 177 ~h~~--~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y--~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
+|+. ++..+++++.|+|||||.+++........... .....++.+++.++|.+.+++...
T Consensus 108 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~f~~~~~~ 171 (199)
T 2xvm_A 108 MFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEGWERVKYN 171 (199)
T ss_dssp GGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTTSEEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcCCeEEEec
Confidence 8877 77889999999999999987764432221111 122346889999999986655543
No 35
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.71 E-value=3.7e-17 Score=143.74 Aligned_cols=126 Identities=20% Similarity=0.356 Sum_probs=98.5
Q ss_pred cCCCCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEec
Q 025071 111 HFLFNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSN 174 (258)
Q Consensus 111 ~~l~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~ 174 (258)
..+.++.+|||||||+|..+..+++.+ ..+|+|+|+++. ...+.++|+.++|+++++||+|+++
T Consensus 33 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 112 (276)
T 3mgg_A 33 TVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVC 112 (276)
T ss_dssp CCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEE
T ss_pred ccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEe
Confidence 345678999999999999999998763 358999998741 2346889999999999999999995
Q ss_pred -cccccCChHHHHHHHHhcccCCcEEEEEeccccCc------C-------------cCCCCCCCChhHHHHHhhcCceEE
Q 025071 175 -VFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRA------D-------------KYSANDLFSVKPLVKLFRESELVA 234 (258)
Q Consensus 175 -~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~------~-------------~y~~~~~~s~~~l~~lf~~~~~~~ 234 (258)
+++|+.++..+++++.|+|||||++++..+..... . .+.....++.+++.++++++|+..
T Consensus 113 ~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 192 (276)
T 3mgg_A 113 FVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEK 192 (276)
T ss_dssp SCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEE
T ss_pred chhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCe
Confidence 89999999999999999999999999975422100 0 011223356788999999999865
Q ss_pred ee
Q 025071 235 VR 236 (258)
Q Consensus 235 v~ 236 (258)
+.
T Consensus 193 v~ 194 (276)
T 3mgg_A 193 IR 194 (276)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 36
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.71 E-value=4.6e-17 Score=138.42 Aligned_cols=123 Identities=21% Similarity=0.272 Sum_probs=97.5
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------------------CCceeeecCCCCCCCCCCeeEEE
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------------------PPLVIKGDFHAQPFDNGTFDFEF 172 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------------------~~~~~~aDa~~LPf~d~SFD~V~ 172 (258)
+.++.+|||+|||+|..+..+++.|. +|+|+|+++. ...+.++|+..+|+++++||+|+
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 45788999999999999999988875 8999998641 12467899999999999999999
Q ss_pred ec-cccccCChH---HHHHHHHhcccCCcEEEEEeccccCc------------------CcC-----------CCCCCCC
Q 025071 173 SN-VFDHALYPW---KFVGEIERTLKPAGVCVLHVALSRRA------------------DKY-----------SANDLFS 219 (258)
Q Consensus 173 s~-~l~h~~~p~---~~l~Ei~RVLKPGG~lii~v~~~~~~------------------~~y-----------~~~~~~s 219 (258)
+. +++|+.++. .+++++.|+|||||++++........ ..+ .....++
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFT 186 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBC
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCC
Confidence 95 899999988 89999999999999999875422100 000 0123578
Q ss_pred hhHHHHHhhcCceEEee
Q 025071 220 VKPLVKLFRESELVAVR 236 (258)
Q Consensus 220 ~~~l~~lf~~~~~~~v~ 236 (258)
.+++.++++++|+..+.
T Consensus 187 ~~~l~~ll~~aGf~~~~ 203 (235)
T 3sm3_A 187 EKELVFLLTDCRFEIDY 203 (235)
T ss_dssp HHHHHHHHHTTTEEEEE
T ss_pred HHHHHHHHHHcCCEEEE
Confidence 99999999999976444
No 37
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.70 E-value=4.8e-17 Score=152.19 Aligned_cols=134 Identities=15% Similarity=0.191 Sum_probs=102.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCC--------C-----ceeeecCCCCCCCCCCe
Q 025071 102 RFFQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRP--------P-----LVIKGDFHAQPFDNGTF 168 (258)
Q Consensus 102 ~~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~--------~-----~~~~aDa~~LPf~d~SF 168 (258)
.+.+.+++...+.++.+|||||||+|..+..|++.|. +|+|+|+++.. . .+..++++.+|+++++|
T Consensus 94 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~f 172 (416)
T 4e2x_A 94 MLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPA 172 (416)
T ss_dssp HHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCE
T ss_pred HHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCE
Confidence 3444555544456788999999999999999998876 89999997421 1 13345677788999999
Q ss_pred eEEEec-cccccCChHHHHHHHHhcccCCcEEEEEecccc------C-cCcC-CCCCCCChhHHHHHhhcCceEEee
Q 025071 169 DFEFSN-VFDHALYPWKFVGEIERTLKPAGVCVLHVALSR------R-ADKY-SANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 169 D~V~s~-~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~------~-~~~y-~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
|+|++. +++|+.++..+++|++|+|||||++++.++... . ...+ .....++.+++.+++++.|+..+.
T Consensus 173 D~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~ 249 (416)
T 4e2x_A 173 NVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVD 249 (416)
T ss_dssp EEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEE
T ss_pred EEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEE
Confidence 999995 899999999999999999999999999876421 0 1111 222347999999999999975443
No 38
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.70 E-value=7e-17 Score=145.14 Aligned_cols=139 Identities=20% Similarity=0.110 Sum_probs=104.9
Q ss_pred CCCCCEEEEECCCCCHHHHHHH--hcCCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEec
Q 025071 113 LFNESKALSIGARVGQEVAALK--LVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSN 174 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~--~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~ 174 (258)
+.++.+|||||||+|..+..++ ..+..+|+|+|+++. ...++++|+.++|++ ++||+|+++
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~ 194 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSN 194 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEEC
Confidence 5678999999999999998884 333458999998742 134788999999998 999999995
Q ss_pred -cccccCChHH---HHHHHHhcccCCcEEEEEeccccCc----C-----cC------------------CCCCCCChhHH
Q 025071 175 -VFDHALYPWK---FVGEIERTLKPAGVCVLHVALSRRA----D-----KY------------------SANDLFSVKPL 223 (258)
Q Consensus 175 -~l~h~~~p~~---~l~Ei~RVLKPGG~lii~v~~~~~~----~-----~y------------------~~~~~~s~~~l 223 (258)
+++|+.++.. +++++.|+|||||++++........ . .+ ....+++.+++
T Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (305)
T 3ocj_A 195 GLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQT 274 (305)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHH
T ss_pred ChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHH
Confidence 7899988886 6899999999999999975322110 0 00 01144789999
Q ss_pred HHHhhcCceEEeeeec-CCCCeEEEEEEeC
Q 025071 224 VKLFRESELVAVRKVD-GFGLDTEVVFRKK 252 (258)
Q Consensus 224 ~~lf~~~~~~~v~~v~-g~~l~~~~~f~K~ 252 (258)
.++++++|+..+...+ ..+....++.+|+
T Consensus 275 ~~~l~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 275 RAQLEEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp HHHHHHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred HHHHHHCCCEEEEEEcccCceeeEEEEecC
Confidence 9999999987766553 4444457777764
No 39
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.70 E-value=9.3e-17 Score=137.67 Aligned_cols=124 Identities=15% Similarity=0.217 Sum_probs=97.4
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC------------CCceeeecCCCCCCCCCCeeEEEec-cccccC
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR------------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHAL 180 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~ 180 (258)
.++.+|||||||+|..+..+++.|..+++|+|+++. ...+.++|+.++|+++++||+|++. +++|+.
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 121 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVE 121 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGCS
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEeccccccc
Confidence 467899999999999999998887558999998742 1346889999999999999999995 889999
Q ss_pred ChHHHHHHHHhcccCCcEEEEEecccc----Cc---------------CcCC------------C--CCCCChhHHHHHh
Q 025071 181 YPWKFVGEIERTLKPAGVCVLHVALSR----RA---------------DKYS------------A--NDLFSVKPLVKLF 227 (258)
Q Consensus 181 ~p~~~l~Ei~RVLKPGG~lii~v~~~~----~~---------------~~y~------------~--~~~~s~~~l~~lf 227 (258)
++..+++++.|+|||||++++.++... .. ..|. . ...++.+++.+++
T Consensus 122 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l 201 (243)
T 3bkw_A 122 DVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNAL 201 (243)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHHHHHHH
T ss_pred hHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHHHHHHHH
Confidence 999999999999999999999764210 00 0010 0 0114789999999
Q ss_pred hcCceEEeee
Q 025071 228 RESELVAVRK 237 (258)
Q Consensus 228 ~~~~~~~v~~ 237 (258)
+++|+..+..
T Consensus 202 ~~aGF~~~~~ 211 (243)
T 3bkw_A 202 IRSGFAIEHV 211 (243)
T ss_dssp HHTTCEEEEE
T ss_pred HHcCCEeeee
Confidence 9999865543
No 40
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.70 E-value=1.7e-16 Score=140.81 Aligned_cols=123 Identities=13% Similarity=0.075 Sum_probs=90.3
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------------------------------CCceeeecCCCC
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------------------------------PPLVIKGDFHAQ 161 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------------------------------~~~~~~aDa~~L 161 (258)
.++.+|||+|||+|..+..|++.|+ +|+|||+|+. ...++++|+.++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 4678999999999999999999987 8999998631 124688999999
Q ss_pred CCCC-CCeeEEEec-cccccCC--hHHHHHHHHhcccCCcEEEEEeccccCcCcCCCC-CCCChhHHHHHhhcC-ceEEe
Q 025071 162 PFDN-GTFDFEFSN-VFDHALY--PWKFVGEIERTLKPAGVCVLHVALSRRADKYSAN-DLFSVKPLVKLFRES-ELVAV 235 (258)
Q Consensus 162 Pf~d-~SFD~V~s~-~l~h~~~--p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~-~~~s~~~l~~lf~~~-~~~~v 235 (258)
|+++ ++||+|++. +++|+.. ...+++|+.|+|||||++++........ ..... ..++.+++.++|.+. .++.+
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~-~~~g~~~~~~~~el~~~l~~~f~v~~~ 224 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPT-KHAGPPFYVPSAELKRLFGTKCSMQCL 224 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTT-SCCCSSCCCCHHHHHHHHTTTEEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCc-cCCCCCCCCCHHHHHHHhhCCeEEEEE
Confidence 9986 899999985 7777763 3568999999999999986543221111 11111 126889999999863 33333
Q ss_pred eee
Q 025071 236 RKV 238 (258)
Q Consensus 236 ~~v 238 (258)
..+
T Consensus 225 ~~~ 227 (252)
T 2gb4_A 225 EEV 227 (252)
T ss_dssp EEE
T ss_pred ecc
Confidence 333
No 41
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.70 E-value=1.3e-16 Score=136.55 Aligned_cols=123 Identities=15% Similarity=0.186 Sum_probs=96.1
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------------CCceeeecCCCCCCCCCCeeEEEe-c-ccc
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------------PPLVIKGDFHAQPFDNGTFDFEFS-N-VFD 177 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------------~~~~~~aDa~~LPf~d~SFD~V~s-~-~l~ 177 (258)
.++.+|||+|||+|..+..+++.|. +++|+|+++. ...+.++|+.++|++ ++||+|++ . +++
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTN 113 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGG
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCcccc
Confidence 3678999999999999999988874 7999998742 345788999999988 89999999 4 789
Q ss_pred cc---CChHHHHHHHHhcccCCcEEEEEeccccCc----------------------------------------CcC--
Q 025071 178 HA---LYPWKFVGEIERTLKPAGVCVLHVALSRRA----------------------------------------DKY-- 212 (258)
Q Consensus 178 h~---~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~----------------------------------------~~y-- 212 (258)
|+ .++..+++++.|+|||||++++.++..... ..|
T Consensus 114 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (246)
T 1y8c_A 114 YIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGEFYKR 193 (246)
T ss_dssp GCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSSSEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecCCcccc
Confidence 98 466789999999999999999865432100 000
Q ss_pred ----CCCCCCChhHHHHHhhcCceEEeeee
Q 025071 213 ----SANDLFSVKPLVKLFRESELVAVRKV 238 (258)
Q Consensus 213 ----~~~~~~s~~~l~~lf~~~~~~~v~~v 238 (258)
...+.|+.+++.++++++|+..+...
T Consensus 194 ~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~ 223 (246)
T 1y8c_A 194 FDEEHEERAYKEEDIEKYLKHGQLNILDKV 223 (246)
T ss_dssp EEEEEEEECCCHHHHHHHHHHTTEEEEEEE
T ss_pred cEEEEEEEcCCHHHHHHHHHHCCCeEEEEE
Confidence 01245799999999999998766654
No 42
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.69 E-value=3.9e-16 Score=131.96 Aligned_cols=122 Identities=22% Similarity=0.441 Sum_probs=97.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------CCceeeecCCC--CCCCCCCeeEEEec-cccccCCh
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------PPLVIKGDFHA--QPFDNGTFDFEFSN-VFDHALYP 182 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------~~~~~~aDa~~--LPf~d~SFD~V~s~-~l~h~~~p 182 (258)
.++.+|||+|||+|..+..+++.| .+++|+|+++. ...+..+|+.. +|+++++||+|++. +++|+.++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~ 109 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDP 109 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCH
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhcCCH
Confidence 467899999999999999998877 58999998742 23467888876 78999999999995 89999999
Q ss_pred HHHHHHHHhcccCCcEEEEEeccccCc--------Cc--C--------CCCCCCChhHHHHHhhcCceEEee
Q 025071 183 WKFVGEIERTLKPAGVCVLHVALSRRA--------DK--Y--------SANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 183 ~~~l~Ei~RVLKPGG~lii~v~~~~~~--------~~--y--------~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
..+++++.|+|||||.+++.++..... .. + .....++.+++.++++++|+..+.
T Consensus 110 ~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 181 (230)
T 3cc8_A 110 WAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISK 181 (230)
T ss_dssp HHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEE
Confidence 999999999999999999987642110 01 1 112447899999999999976544
No 43
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.69 E-value=5.6e-17 Score=143.10 Aligned_cols=94 Identities=18% Similarity=0.249 Sum_probs=78.2
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCCC-CCCCeeEEEec
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPF-DNGTFDFEFSN 174 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf-~d~SFD~V~s~ 174 (258)
.+.++.+|||||||+|..+..+++.|..+++|+|+++. ...++++|+.++|+ ++++||+|++.
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 61 YTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp HCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred hCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEEC
Confidence 35678899999999999998888877668999998742 12567899999999 68999999995
Q ss_pred -cccc----cCChHHHHHHHHhcccCCcEEEEEecc
Q 025071 175 -VFDH----ALYPWKFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 175 -~l~h----~~~p~~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
+++| ..++..+++++.|+|||||++++.++.
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 6655 456788999999999999999998754
No 44
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.69 E-value=2.9e-16 Score=138.94 Aligned_cols=131 Identities=17% Similarity=0.139 Sum_probs=99.2
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHH-hcCCCcEEEEeCCCC----------------CCceeeecCCCCCCCC
Q 025071 103 FFQDLKQRHFLFNESKALSIGARVGQEVAALK-LVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDN 165 (258)
Q Consensus 103 ~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~-~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d 165 (258)
.++.+++...+.++.+|||||||+|..+..++ ..|. +|+|+|+++. ...+..+|+.++|
T Consensus 52 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--- 127 (287)
T 1kpg_A 52 KIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--- 127 (287)
T ss_dssp HHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---
T ss_pred HHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---
Confidence 34444444446678899999999999999888 4565 8999998742 2346788888777
Q ss_pred CCeeEEEec-ccccc--CChHHHHHHHHhcccCCcEEEEEeccccCcC-----------------------cCCCCCCCC
Q 025071 166 GTFDFEFSN-VFDHA--LYPWKFVGEIERTLKPAGVCVLHVALSRRAD-----------------------KYSANDLFS 219 (258)
Q Consensus 166 ~SFD~V~s~-~l~h~--~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~-----------------------~y~~~~~~s 219 (258)
++||+|++. +++|+ .++..+++|+.|+|||||++++......... .++...+++
T Consensus 128 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 207 (287)
T 1kpg_A 128 EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPS 207 (287)
T ss_dssp CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCC
T ss_pred CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCC
Confidence 899999995 89999 6789999999999999999999764321100 112345568
Q ss_pred hhHHHHHhhcCceEEeee
Q 025071 220 VKPLVKLFRESELVAVRK 237 (258)
Q Consensus 220 ~~~l~~lf~~~~~~~v~~ 237 (258)
.+++.++++++|+..+..
T Consensus 208 ~~~~~~~l~~aGf~~~~~ 225 (287)
T 1kpg_A 208 IPMVQECASANGFTVTRV 225 (287)
T ss_dssp HHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHhCCcEEEEE
Confidence 999999999999765544
No 45
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.69 E-value=1.3e-16 Score=137.93 Aligned_cols=124 Identities=15% Similarity=0.186 Sum_probs=95.9
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEec-cccc
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDH 178 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h 178 (258)
++.+|||||||+|..+..|++.+..+|+|+|+++. ...++++|+..+++++++||+|++. +++|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 57899999999999999988776568999998742 1236789999999999999999995 8899
Q ss_pred cCChH--HHHHHHHhcccCCcEEEEEeccccCcCcC---CCCCCCChhHHHHHhhcCceEEeeee
Q 025071 179 ALYPW--KFVGEIERTLKPAGVCVLHVALSRRADKY---SANDLFSVKPLVKLFRESELVAVRKV 238 (258)
Q Consensus 179 ~~~p~--~~l~Ei~RVLKPGG~lii~v~~~~~~~~y---~~~~~~s~~~l~~lf~~~~~~~v~~v 238 (258)
+.++. .+++++.|+|||||++++..+.......+ .....++.+++.++++++|+..+...
T Consensus 159 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 159 LTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEee
Confidence 88765 78999999999999999975432211111 11112478999999999987655443
No 46
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.68 E-value=1.6e-16 Score=137.80 Aligned_cols=121 Identities=18% Similarity=0.139 Sum_probs=94.9
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------------CCceeeecCCCCCCCCCCeeEEEec-cc
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------------PPLVIKGDFHAQPFDNGTFDFEFSN-VF 176 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l 176 (258)
.+.++.+|||||||+|..+..+++.+ .+|+|+|+++. ...+.++|++++|+++++||+|++. ++
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARG-YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTT-CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCG
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCch
Confidence 45678899999999999999998876 48999998641 2347889999999999999999995 88
Q ss_pred cccCChHHHHHHHHhcccCCcEEEEEeccccCcC---------------cCC---CCCCCChhHHHHHhhcCceE
Q 025071 177 DHALYPWKFVGEIERTLKPAGVCVLHVALSRRAD---------------KYS---ANDLFSVKPLVKLFRESELV 233 (258)
Q Consensus 177 ~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~---------------~y~---~~~~~s~~~l~~lf~~~~~~ 233 (258)
+|+.++..+++|+.|+|||||++++.++...... .+. ....++.+++.+++.++|+.
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 189 (263)
T 2yqz_A 115 HLVPDWPKVLAEAIRVLKPGGALLEGWDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLK 189 (263)
T ss_dssp GGCTTHHHHHHHHHHHEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred hhcCCHHHHHHHHHHHCCCCcEEEEEecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCC
Confidence 9999999999999999999999988744321000 011 11234677888999988865
No 47
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.68 E-value=4.9e-16 Score=132.84 Aligned_cols=136 Identities=18% Similarity=0.156 Sum_probs=101.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------CCceeeecCCCCCCCCCCeeEEEe-c-cccccCC
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------PPLVIKGDFHAQPFDNGTFDFEFS-N-VFDHALY 181 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------~~~~~~aDa~~LPf~d~SFD~V~s-~-~l~h~~~ 181 (258)
.++.+|||+|||+|..+..+++.+. +++|+|+++. ...+.++|+.++|+ +++||+|+| . +++|+.+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCS
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCC
Confidence 5678999999999999999988764 8999999752 24578899999998 789999995 3 7888854
Q ss_pred ---hHHHHHHHHhcccCCcEEEEEeccccCc--C--------------------------------cC---C--------
Q 025071 182 ---PWKFVGEIERTLKPAGVCVLHVALSRRA--D--------------------------------KY---S-------- 213 (258)
Q Consensus 182 ---p~~~l~Ei~RVLKPGG~lii~v~~~~~~--~--------------------------------~y---~-------- 213 (258)
+..+++++.|+|||||.+++........ . .| .
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVADPGKGVRHF 196 (239)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEecCCCcceEE
Confidence 4578999999999999999864321100 0 00 0
Q ss_pred ----CCCCCChhHHHHHhhcCceEEeeeec-CCCCeEEEEEEeC
Q 025071 214 ----ANDLFSVKPLVKLFRESELVAVRKVD-GFGLDTEVVFRKK 252 (258)
Q Consensus 214 ----~~~~~s~~~l~~lf~~~~~~~v~~v~-g~~l~~~~~f~K~ 252 (258)
...+|+.+++.++++++|+ .+..+. ..+-...++.+|+
T Consensus 197 ~~~~~~~~~t~~~~~~ll~~aGF-~v~~~~~~~~~~~~~va~K~ 239 (239)
T 3bxo_A 197 SDVHLITLFHQAEYEAAFTAAGL-RVEYLEGGPSGRGLFVGVPA 239 (239)
T ss_dssp EEEEEEECCCHHHHHHHHHHTTE-EEEEESSTTTSSCEEEEEEC
T ss_pred EEEEEeeecCHHHHHHHHHHCCC-EEEEeEcCCCCceEEEEecC
Confidence 0134789999999999999 555553 3344456777663
No 48
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.68 E-value=5.3e-16 Score=138.80 Aligned_cols=130 Identities=15% Similarity=0.069 Sum_probs=98.9
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC----------------CCceeeecCCCCCCCC
Q 025071 103 FFQDLKQRHFLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDN 165 (258)
Q Consensus 103 ~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d 165 (258)
.++.+++...+.++.+|||||||+|..+..+++. | .+|+|+|+++. ...+..+|+.++ +
T Consensus 60 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~ 135 (302)
T 3hem_A 60 KRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---D 135 (302)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---C
T ss_pred HHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---C
Confidence 3444555445678889999999999999999876 7 58999999742 134678888776 7
Q ss_pred CCeeEEEec-cccccCCh---------HHHHHHHHhcccCCcEEEEEeccccCcC-----------------------cC
Q 025071 166 GTFDFEFSN-VFDHALYP---------WKFVGEIERTLKPAGVCVLHVALSRRAD-----------------------KY 212 (258)
Q Consensus 166 ~SFD~V~s~-~l~h~~~p---------~~~l~Ei~RVLKPGG~lii~v~~~~~~~-----------------------~y 212 (258)
++||+|++. +++|+.+| ..+++++.|+|||||++++......... .+
T Consensus 136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (302)
T 3hem_A 136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIF 215 (302)
T ss_dssp CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTC
T ss_pred CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcC
Confidence 999999995 89999877 6899999999999999999754322100 11
Q ss_pred CCCCCCChhHHHHHhhcCceEEee
Q 025071 213 SANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 213 ~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
+...+.+.+++.+++++.|+..+.
T Consensus 216 p~~~~~s~~~~~~~l~~aGf~~~~ 239 (302)
T 3hem_A 216 PGGRLPRISQVDYYSSNAGWKVER 239 (302)
T ss_dssp TTCCCCCHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCCHHHHHHHHHhCCcEEEE
Confidence 233567889999999998875443
No 49
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.68 E-value=2.6e-16 Score=132.19 Aligned_cols=123 Identities=20% Similarity=0.311 Sum_probs=94.0
Q ss_pred CCCCCEEEEECCCCCHH-HHHHHhcCCCcEEEEeCCCC--------------CCceeeecCCCCCCCCCCeeEEEec-cc
Q 025071 113 LFNESKALSIGARVGQE-VAALKLVGVSDSIGIDLVPR--------------PPLVIKGDFHAQPFDNGTFDFEFSN-VF 176 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~-~~~L~~~g~~~v~GvD~s~~--------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l 176 (258)
..++.+|||+|||+|.. ...+++.|. +|+|+|+++. ...+.++|+.++|+++++||+|++. ++
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChH
Confidence 34678999999999997 556666664 8999998742 2457889999999999999999995 78
Q ss_pred ccc--CChHHHHHHHHhcccCCcEEEEEeccccCcC----------cCC--------CCCCCChhHHHHHhhcCceEEee
Q 025071 177 DHA--LYPWKFVGEIERTLKPAGVCVLHVALSRRAD----------KYS--------ANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 177 ~h~--~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~----------~y~--------~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
+|+ .++..+++++.|+|||||++++......... .|. ...+++.+++.++|.+.|+....
T Consensus 100 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~ 179 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKE 179 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEE
T ss_pred HhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeee
Confidence 888 5778899999999999999998764321100 010 11346889999999999876443
No 50
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.67 E-value=8.7e-16 Score=129.55 Aligned_cols=123 Identities=15% Similarity=0.177 Sum_probs=92.5
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------CCceeeecCCCC---CCCCCC-eeEEEec-ccccc
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------PPLVIKGDFHAQ---PFDNGT-FDFEFSN-VFDHA 179 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------~~~~~~aDa~~L---Pf~d~S-FD~V~s~-~l~h~ 179 (258)
.++.+|||||||+|..+..+++.|. +|+|+|+++. ...+..+|+..+ |+.++. ||+|+++ +++ .
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~ 128 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-H 128 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-S
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh-h
Confidence 3568999999999999999998875 8999999752 234667776666 666554 9999996 566 7
Q ss_pred CChHHHHHHHHhcccCCcEEEEEeccccCcC------c-----C---------CCCCCCChhHHHHHhhcCceEEeeee
Q 025071 180 LYPWKFVGEIERTLKPAGVCVLHVALSRRAD------K-----Y---------SANDLFSVKPLVKLFRESELVAVRKV 238 (258)
Q Consensus 180 ~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~------~-----y---------~~~~~~s~~~l~~lf~~~~~~~v~~v 238 (258)
.++..+++++.|+|||||++++..+...... . + ....+++.+++.++++++|+..+...
T Consensus 129 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 207 (227)
T 3e8s_A 129 QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQ 207 (227)
T ss_dssp SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred hhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEe
Confidence 8899999999999999999999865321100 0 1 01123589999999999998765533
No 51
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.67 E-value=1.5e-15 Score=128.51 Aligned_cols=138 Identities=18% Similarity=0.170 Sum_probs=96.0
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-------------CCceeeecCCCCCCCCCCeeEEEec-cccc
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-------------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDH 178 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h 178 (258)
..++.+|||+|||+|..+..+++.+. +|+|+|+++. ...++++|+.+++ ++++||+|+++ +++|
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLYY 126 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGGG
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHHh
Confidence 34668999999999999999988774 8999998742 2357889999998 78999999995 8999
Q ss_pred cCChH---HHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhc-CceEEeeeecCCCCe---EEEEEEe
Q 025071 179 ALYPW---KFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRE-SELVAVRKVDGFGLD---TEVVFRK 251 (258)
Q Consensus 179 ~~~p~---~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~-~~~~~v~~v~g~~l~---~~~~f~K 251 (258)
+.++. .+++++.|+|||||.+++..+..+....+ ......+.+..++.+ .+.+......+.... ...+|+|
T Consensus 127 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~d~~l~~~~~ 204 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRW--GHVAGAETVITILTEALTEVERVQCQGQSADEDCLLARFRN 204 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHT--TCSCCHHHHHHHHHHHSEEEEEEEEECSSTTCEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEEEecCCCcchhh--hhhhhHHHHHHHHHhhccceEEEeccCCccccchhHHHHhC
Confidence 99884 66999999999999999976543211111 123456667677653 333222222222222 3566777
Q ss_pred CCc
Q 025071 252 KKK 254 (258)
Q Consensus 252 ~~~ 254 (258)
.+.
T Consensus 205 ~~~ 207 (216)
T 3ofk_A 205 PER 207 (216)
T ss_dssp CC-
T ss_pred Ccc
Confidence 554
No 52
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.67 E-value=1.5e-15 Score=124.97 Aligned_cols=116 Identities=20% Similarity=0.216 Sum_probs=94.2
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------CCceeeecCCCCCCCCCCeeEEEec--cccccC
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------PPLVIKGDFHAQPFDNGTFDFEFSN--VFDHAL 180 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------~~~~~~aDa~~LPf~d~SFD~V~s~--~l~h~~ 180 (258)
+.++.+|||+|||+|..+..+++.|. +++|+|+++. ...+.++|+.++|+++++||+|+++ +++|..
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~ 122 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLA 122 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSC
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcC
Confidence 46788999999999999999988874 8999998752 2457889999999999999999995 566663
Q ss_pred --ChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEeeee
Q 025071 181 --YPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVRKV 238 (258)
Q Consensus 181 --~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~~v 238 (258)
+...+++++.|+|||||.+++..+.. ..++.+++.+++.+.|+..+...
T Consensus 123 ~~~~~~~l~~~~~~l~~~G~l~~~~~~~---------~~~~~~~~~~~l~~~Gf~~~~~~ 173 (195)
T 3cgg_A 123 EDGREPALANIHRALGADGRAVIGFGAG---------RGWVFGDFLEVAERVGLELENAF 173 (195)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEETT---------SSCCHHHHHHHHHHHTEEEEEEE
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEEeCCC---------CCcCHHHHHHHHHHcCCEEeeee
Confidence 34678999999999999999976532 22578999999999998765544
No 53
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.67 E-value=2.8e-16 Score=146.39 Aligned_cols=123 Identities=18% Similarity=0.261 Sum_probs=95.4
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhc--CCCcEEEEeCCCC-----------------------CCceeeecCCCC------
Q 025071 113 LFNESKALSIGARVGQEVAALKLV--GVSDSIGIDLVPR-----------------------PPLVIKGDFHAQ------ 161 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~--g~~~v~GvD~s~~-----------------------~~~~~~aDa~~L------ 161 (258)
..++.+|||||||+|..+..+++. ...+|+|+|+++. ...++++|++++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 346789999999999999888764 2348999998741 234688999988
Q ss_pred CCCCCCeeEEEec-cccccCChHHHHHHHHhcccCCcEEEEEeccccCc-C----------cCCCCCCCChhHHHHHhhc
Q 025071 162 PFDNGTFDFEFSN-VFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRA-D----------KYSANDLFSVKPLVKLFRE 229 (258)
Q Consensus 162 Pf~d~SFD~V~s~-~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~-~----------~y~~~~~~s~~~l~~lf~~ 229 (258)
|+++++||+|+++ +++|+.++..+++|+.|+|||||++++........ . .......++.+++.+++++
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 240 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAE 240 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHH
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHH
Confidence 9999999999995 88999999999999999999999999874322110 0 0012234678999999999
Q ss_pred CceEEe
Q 025071 230 SELVAV 235 (258)
Q Consensus 230 ~~~~~v 235 (258)
.|+..+
T Consensus 241 aGF~~v 246 (383)
T 4fsd_A 241 AGFRDV 246 (383)
T ss_dssp TTCCCE
T ss_pred CCCceE
Confidence 987543
No 54
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.67 E-value=9.3e-16 Score=130.97 Aligned_cols=118 Identities=24% Similarity=0.384 Sum_probs=94.5
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------CCceeeecCCCCCCCCCCeeEEEec-cccccCChHHH
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHALYPWKF 185 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~p~~~ 185 (258)
++.+|||||||+|..+..+++. +|+|+++. ...+.++|+..+|+++++||+|++. +++|+.++..+
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~ 121 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKRGVFVLKGTAENLPLKDESFDFALMVTTICFVDDPERA 121 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHTTCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHHH
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhcCCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHHH
Confidence 3789999999999999888653 89998742 3457889999999999999999995 89999999999
Q ss_pred HHHHHhcccCCcEEEEEeccccCc-----------C-cCCCCCCCChhHHHHHhhcCceEEeee
Q 025071 186 VGEIERTLKPAGVCVLHVALSRRA-----------D-KYSANDLFSVKPLVKLFRESELVAVRK 237 (258)
Q Consensus 186 l~Ei~RVLKPGG~lii~v~~~~~~-----------~-~y~~~~~~s~~~l~~lf~~~~~~~v~~ 237 (258)
++++.|+|||||.+++..+..... . .+.....++.+++.++++++|+..+..
T Consensus 122 l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 185 (219)
T 1vlm_A 122 LKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKV 185 (219)
T ss_dssp HHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEE
Confidence 999999999999999986532110 0 112334579999999999999765443
No 55
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.66 E-value=6.3e-16 Score=135.51 Aligned_cols=91 Identities=22% Similarity=0.250 Sum_probs=78.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------CCceeeecCCCCCCCCCCeeEEEec-ccccc-CCh
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHA-LYP 182 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~-~~p 182 (258)
.++.+|||||||+|..+..+++.|. +++|+|+++. ...+.++|+.++|+++++||+|++. ++.|+ .++
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~ 131 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVENK 131 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSCH
T ss_pred CCCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhccccH
Confidence 3778999999999999999988875 8999998742 1237889999999999999999995 56665 689
Q ss_pred HHHHHHHHhcccCCcEEEEEecc
Q 025071 183 WKFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 183 ~~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
..+++|+.|+|||||.+++.++.
T Consensus 132 ~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 132 DKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEB
T ss_pred HHHHHHHHHHcCCCeEEEEEeCC
Confidence 99999999999999999987653
No 56
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.66 E-value=2.2e-15 Score=129.54 Aligned_cols=119 Identities=18% Similarity=0.138 Sum_probs=91.3
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEec-ccc
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSN-VFD 177 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~ 177 (258)
++.+|||||||+|..+..|++.|. +|+|+|+++. ...++++|+.+++ ++++||+|++. +++
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFC 143 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTT
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhh
Confidence 345999999999999999987664 7999998742 1347889999988 45699999995 788
Q ss_pred ccC--ChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEee
Q 025071 178 HAL--YPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 178 h~~--~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
|+. ++..+++++.|+|||||++++........ .......++.+++.++|.+.|+..+.
T Consensus 144 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Gf~~~~ 203 (235)
T 3lcc_A 144 AIEPEMRPAWAKSMYELLKPDGELITLMYPITDH-VGGPPYKVDVSTFEEVLVPIGFKAVS 203 (235)
T ss_dssp TSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCC-CSCSSCCCCHHHHHHHHGGGTEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCCcEEEEEEeccccc-CCCCCccCCHHHHHHHHHHcCCeEEE
Confidence 887 78899999999999999998865422110 10111226889999999999876544
No 57
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.66 E-value=6.3e-17 Score=142.90 Aligned_cols=123 Identities=16% Similarity=0.083 Sum_probs=88.4
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCCC-----------------------------------------
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRPP----------------------------------------- 151 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~~----------------------------------------- 151 (258)
..++.+|||||||+|.....++..|+.+|+|+|+|+...
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 346789999999999887776677766799999984200
Q ss_pred ----ceeeecCCC-CCCC---CCCeeEEEec-ccccc----CChHHHHHHHHhcccCCcEEEEEeccccCc---CcC-CC
Q 025071 152 ----LVIKGDFHA-QPFD---NGTFDFEFSN-VFDHA----LYPWKFVGEIERTLKPAGVCVLHVALSRRA---DKY-SA 214 (258)
Q Consensus 152 ----~~~~aDa~~-LPf~---d~SFD~V~s~-~l~h~----~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~---~~y-~~ 214 (258)
.++++|+.+ .|++ +++||+|++. +++|+ .+...++++++|+|||||++++........ ... ..
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~ 212 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFS 212 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEee
Confidence 156788777 4654 6899999995 77775 344678999999999999999975322110 000 01
Q ss_pred CCCCChhHHHHHhhcCceEEe
Q 025071 215 NDLFSVKPLVKLFRESELVAV 235 (258)
Q Consensus 215 ~~~~s~~~l~~lf~~~~~~~v 235 (258)
...++.+++.+++.+.|+..+
T Consensus 213 ~~~~~~~~l~~~l~~aGF~i~ 233 (263)
T 2a14_A 213 CVALEKGEVEQAVLDAGFDIE 233 (263)
T ss_dssp CCCCCHHHHHHHHHHTTEEEE
T ss_pred ccccCHHHHHHHHHHCCCEEE
Confidence 123588999999999997543
No 58
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.66 E-value=1.5e-15 Score=129.01 Aligned_cols=121 Identities=15% Similarity=0.110 Sum_probs=90.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCC--------------------CCceeeecCCCCCCCCCCeeEEE
Q 025071 114 FNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPR--------------------PPLVIKGDFHAQPFDNGTFDFEF 172 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~--------------------~~~~~~aDa~~LPf~d~SFD~V~ 172 (258)
.++.+|||||||+|..+..+++.+ ..+|+|+|+++. ...+.++|+..+++++++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 367899999999999999998865 358999998641 23577889988899899999999
Q ss_pred ec-cccccCCh--HHHHHHHHhcccCCcEEEEEecccc-----CcC----cC-CCCCCCChhHHH----HHhhcCceEE
Q 025071 173 SN-VFDHALYP--WKFVGEIERTLKPAGVCVLHVALSR-----RAD----KY-SANDLFSVKPLV----KLFRESELVA 234 (258)
Q Consensus 173 s~-~l~h~~~p--~~~l~Ei~RVLKPGG~lii~v~~~~-----~~~----~y-~~~~~~s~~~l~----~lf~~~~~~~ 234 (258)
+. +++|+.++ ..+++++.|+|||||++++...... ... .+ .....++.+++. +++++.|+.-
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v 186 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNV 186 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEE
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceE
Confidence 95 89999877 7899999999999996666533210 000 00 111225888888 7778888743
No 59
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.65 E-value=2.7e-15 Score=131.52 Aligned_cols=132 Identities=14% Similarity=0.050 Sum_probs=97.1
Q ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHhc-CC-CcEEEEeCCCC----------------------CCceeeec---C
Q 025071 106 DLKQRHFLFNESKALSIGARVGQEVAALKLV-GV-SDSIGIDLVPR----------------------PPLVIKGD---F 158 (258)
Q Consensus 106 ~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g~-~~v~GvD~s~~----------------------~~~~~~aD---a 158 (258)
.+++...+.++.+|||||||+|..+..+++. |. .+|+|+|+++. ...+..+| .
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 113 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSD 113 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTT
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhh
Confidence 3344334678899999999999999998875 43 58999999864 12356777 6
Q ss_pred CCCCCCCCCeeEEEec-cccccCChHHHHHHHHhcccCCcEEEEEeccccCc--C---------------------cCCC
Q 025071 159 HAQPFDNGTFDFEFSN-VFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRA--D---------------------KYSA 214 (258)
Q Consensus 159 ~~LPf~d~SFD~V~s~-~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~--~---------------------~y~~ 214 (258)
..+||++++||+|++. +++|+.++..+++.+.++++|||++++........ . ....
T Consensus 114 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (275)
T 3bkx_A 114 DLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANI 193 (275)
T ss_dssp CCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSC
T ss_pred ccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccccccc
Confidence 7889999999999995 89999999887777777777799998874322100 0 0112
Q ss_pred CCCCChhHHHHHhhcCceEEeee
Q 025071 215 NDLFSVKPLVKLFRESELVAVRK 237 (258)
Q Consensus 215 ~~~~s~~~l~~lf~~~~~~~v~~ 237 (258)
..+++.+++.++++++|+..+..
T Consensus 194 ~~~~s~~~l~~~l~~aGf~~~~~ 216 (275)
T 3bkx_A 194 RTLITPDTLAQIAHDNTWTYTAG 216 (275)
T ss_dssp CCCCCHHHHHHHHHHHTCEEEEC
T ss_pred cccCCHHHHHHHHHHCCCeeEEE
Confidence 24579999999999999766543
No 60
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.65 E-value=4.4e-16 Score=138.56 Aligned_cols=125 Identities=13% Similarity=0.124 Sum_probs=97.0
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC--------------CCceeeecCCCCCCCCCCeeEEEec-
Q 025071 112 FLFNESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR--------------PPLVIKGDFHAQPFDNGTFDFEFSN- 174 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~--------------~~~~~~aDa~~LPf~d~SFD~V~s~- 174 (258)
.+.++.+|||||||+|..+..+++. + ..+|+|+|+++. ...+.++|+.++|++ ++||+|++.
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~ 97 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHA 97 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEES
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECC
Confidence 3457889999999999999999875 2 258999999752 234788999999995 699999995
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEEecc-----cc---CcC-------------------cCCCCCCCChhHHHHHh
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLHVAL-----SR---RAD-------------------KYSANDLFSVKPLVKLF 227 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~-----~~---~~~-------------------~y~~~~~~s~~~l~~lf 227 (258)
+++|+.++..++++++|+|||||++++..+. .. ... ..........+++.+++
T Consensus 98 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 177 (284)
T 3gu3_A 98 FLLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKIPIYL 177 (284)
T ss_dssp CGGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTHHHHH
T ss_pred hhhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHHHHHH
Confidence 8899999999999999999999999987654 10 000 00122344567899999
Q ss_pred hcCceEEeee
Q 025071 228 RESELVAVRK 237 (258)
Q Consensus 228 ~~~~~~~v~~ 237 (258)
+++|+.++..
T Consensus 178 ~~aGF~~v~~ 187 (284)
T 3gu3_A 178 SELGVKNIEC 187 (284)
T ss_dssp HHTTCEEEEE
T ss_pred HHcCCCeEEE
Confidence 9999987765
No 61
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.64 E-value=3.2e-15 Score=126.82 Aligned_cols=92 Identities=24% Similarity=0.332 Sum_probs=77.6
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCC--------------CCCceeeecCCCCCCCCCCeeEEEec-c--
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVP--------------RPPLVIKGDFHAQPFDNGTFDFEFSN-V-- 175 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~--------------~~~~~~~aDa~~LPf~d~SFD~V~s~-~-- 175 (258)
+.++.+|||+|||+|..+..+++.+. +++|+|+++ ....++++|+.++|+++++||+|+++ +
T Consensus 36 ~~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 36 MKKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIV 114 (227)
T ss_dssp CCSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGG
T ss_pred cCCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchH
Confidence 45578999999999999999988875 899999874 12457889999999999999999995 5
Q ss_pred ccccCChHHHHHHHHhcccCCcEEEEEecc
Q 025071 176 FDHALYPWKFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 176 l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
++|..++..+++++.|+|||||++++..+.
T Consensus 115 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 115 HFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp GCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 555567788999999999999999887553
No 62
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.64 E-value=1.1e-15 Score=137.51 Aligned_cols=130 Identities=15% Similarity=0.091 Sum_probs=98.9
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC----------------CCceeeecCCCCCCCC
Q 025071 103 FFQDLKQRHFLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDN 165 (258)
Q Consensus 103 ~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d 165 (258)
.++.+++...+.++.+|||||||+|..+..+++. |. +|+|+|+++. ...+..+|+.++|
T Consensus 78 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 153 (318)
T 2fk8_A 78 KVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--- 153 (318)
T ss_dssp HHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---
T ss_pred HHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---
Confidence 3444554445667889999999999999988875 75 8999998742 1346788888876
Q ss_pred CCeeEEEec-ccccc--CChHHHHHHHHhcccCCcEEEEEeccccCcC-----------------------cCCCCCCCC
Q 025071 166 GTFDFEFSN-VFDHA--LYPWKFVGEIERTLKPAGVCVLHVALSRRAD-----------------------KYSANDLFS 219 (258)
Q Consensus 166 ~SFD~V~s~-~l~h~--~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~-----------------------~y~~~~~~s 219 (258)
++||+|++. +++|+ .++..+++|+.|+|||||++++..+...... .+....+++
T Consensus 154 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 233 (318)
T 2fk8_A 154 EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPS 233 (318)
T ss_dssp CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCC
T ss_pred CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCC
Confidence 799999995 88998 5788999999999999999999865432100 012345678
Q ss_pred hhHHHHHhhcCceEEee
Q 025071 220 VKPLVKLFRESELVAVR 236 (258)
Q Consensus 220 ~~~l~~lf~~~~~~~v~ 236 (258)
.+++.++++++|+..+.
T Consensus 234 ~~~~~~~l~~aGf~~~~ 250 (318)
T 2fk8_A 234 TEMMVEHGEKAGFTVPE 250 (318)
T ss_dssp HHHHHHHHHHTTCBCCC
T ss_pred HHHHHHHHHhCCCEEEE
Confidence 99999999999876443
No 63
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.64 E-value=1.2e-16 Score=142.29 Aligned_cols=121 Identities=17% Similarity=0.070 Sum_probs=85.4
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCCC-------------------------------------------
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRPP------------------------------------------- 151 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~~------------------------------------------- 151 (258)
++.+|||||||+|.....++..+..+|+|+|+++...
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 6789999999999955444443335899999975211
Q ss_pred --ceeeecCCC-CCCC-----CCCeeEEEec-cccc----cCChHHHHHHHHhcccCCcEEEEEeccccCc----CcCCC
Q 025071 152 --LVIKGDFHA-QPFD-----NGTFDFEFSN-VFDH----ALYPWKFVGEIERTLKPAGVCVLHVALSRRA----DKYSA 214 (258)
Q Consensus 152 --~~~~aDa~~-LPf~-----d~SFD~V~s~-~l~h----~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~----~~y~~ 214 (258)
.++++|+.+ +||+ +++||+|+++ +++| ..++..+++|++|+|||||++++........ +.-..
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~ 230 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLT 230 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeee
Confidence 123348887 7754 4679999995 7888 5578899999999999999999863221110 00011
Q ss_pred CCCCChhHHHHHhhcCceEEe
Q 025071 215 NDLFSVKPLVKLFRESELVAV 235 (258)
Q Consensus 215 ~~~~s~~~l~~lf~~~~~~~v 235 (258)
...++.+++.+++.++|+..+
T Consensus 231 ~~~~~~~~l~~~l~~aGf~~~ 251 (289)
T 2g72_A 231 VVPVSEEEVREALVRSGYKVR 251 (289)
T ss_dssp CCCCCHHHHHHHHHHTTEEEE
T ss_pred eccCCHHHHHHHHHHcCCeEE
Confidence 335689999999999997543
No 64
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.63 E-value=1.2e-15 Score=135.10 Aligned_cols=120 Identities=18% Similarity=0.223 Sum_probs=93.2
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------------CCceeeecCCCCCCCCCCeeEEEec-ccccc
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHA 179 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~ 179 (258)
++.+|||+|||+|..+..|++.|. +|+|+|+++. ...+.++|+.++++ +++||+|+++ +++|+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFL 197 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGS
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhhC
Confidence 678999999999999999998876 8999998742 23578899999988 8899999996 78887
Q ss_pred CCh--HHHHHHHHhcccCCcEEEEEeccccCcCcC--CCCCCCChhHHHHHhhcCceEEee
Q 025071 180 LYP--WKFVGEIERTLKPAGVCVLHVALSRRADKY--SANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 180 ~~p--~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y--~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
..+ ..+++++.|+|||||.+++........... .....++..++.++|.+.+++...
T Consensus 198 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 258 (286)
T 3m70_A 198 NRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKDWEFLEYN 258 (286)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTTSEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcCCEEEEEE
Confidence 654 488999999999999988765433221111 123346889999999887766553
No 65
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.63 E-value=8.5e-16 Score=137.29 Aligned_cols=88 Identities=14% Similarity=0.052 Sum_probs=76.4
Q ss_pred CCCCEEEEECCCCCHHHHHHHh--cCCCcEEEEeCCCC-----------------CCceeeecCCCCCCCC------CCe
Q 025071 114 FNESKALSIGARVGQEVAALKL--VGVSDSIGIDLVPR-----------------PPLVIKGDFHAQPFDN------GTF 168 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~--~g~~~v~GvD~s~~-----------------~~~~~~aDa~~LPf~d------~SF 168 (258)
.++.+|||||||+|..+..|++ .+..+|+|+|+++. ...++++|++++|+++ ++|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 5788999999999999999985 24568999998741 2347889999999988 999
Q ss_pred eEEEec-cccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 169 DFEFSN-VFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 169 D~V~s~-~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
|+|+++ +++|+ ++..+++++.|+|||||.+++.
T Consensus 115 D~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 115 DMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp EEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEE
Confidence 999995 78888 9999999999999999999884
No 66
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.63 E-value=2.5e-15 Score=125.99 Aligned_cols=123 Identities=14% Similarity=0.157 Sum_probs=92.6
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------------CCceeeecCCCCCCCCCCeeEEEeccccc
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------------PPLVIKGDFHAQPFDNGTFDFEFSNVFDH 178 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------------~~~~~~aDa~~LPf~d~SFD~V~s~~l~h 178 (258)
+.++ +|||||||+|..+..+++.|. +++|+|+++. ...+.++|+.++|+++++||+|++. +.|
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~-~~~ 104 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSI-FCH 104 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE-CCC
T ss_pred CCCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEE-hhc
Confidence 3456 999999999999999998875 8999998742 2346788999999999999999994 444
Q ss_pred c--CChHHHHHHHHhcccCCcEEEEEeccccCc-----CcCCCCCCCChhHHHHHhhcCceEEeeee
Q 025071 179 A--LYPWKFVGEIERTLKPAGVCVLHVALSRRA-----DKYSANDLFSVKPLVKLFRESELVAVRKV 238 (258)
Q Consensus 179 ~--~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~-----~~y~~~~~~s~~~l~~lf~~~~~~~v~~v 238 (258)
. .++..+++++.|+|||||.+++........ ........++.+++.++|.+..++.+...
T Consensus 105 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~Gf~v~~~~~~ 171 (202)
T 2kw5_A 105 LPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELPSLNWLIANNL 171 (202)
T ss_dssp CCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCSSSCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhcCceEEEEEEE
Confidence 4 356788999999999999999986533211 01112345799999999995455554443
No 67
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.62 E-value=5.3e-16 Score=130.10 Aligned_cols=92 Identities=21% Similarity=0.241 Sum_probs=77.1
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-------------CCceeeecCCCCCCCCCCeeEEEec-cccc
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-------------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDH 178 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h 178 (258)
+.++.+|||+|||+|..+..+++.|..+++|+|+++. ...+.++|+.++|+++++||+|+++ .++|
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 4678899999999999999998887658999998742 2357889999999999999999985 5544
Q ss_pred cC---------------ChHHHHHHHHhcccCCcEEEEEec
Q 025071 179 AL---------------YPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 179 ~~---------------~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
+. ++..+++++.|+|||||++++..+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 43 557899999999999999999765
No 68
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.62 E-value=3.9e-15 Score=127.53 Aligned_cols=89 Identities=15% Similarity=0.075 Sum_probs=73.8
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------------CCceeeecCCCCCCCCCCeeEEEec--cc
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------------PPLVIKGDFHAQPFDNGTFDFEFSN--VF 176 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------------~~~~~~aDa~~LPf~d~SFD~V~s~--~l 176 (258)
+.++.+|||+|||+|..+..+++. .+++|+|+++. ...+.++|+.++|++ ++||+|++. ++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~ 107 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSL 107 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGG
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCch
Confidence 456789999999999999988876 58999998742 235788999999987 899999984 78
Q ss_pred cccC---ChHHHHHHHHhcccCCcEEEEEec
Q 025071 177 DHAL---YPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 177 ~h~~---~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
+|+. ++..+++++.|+|||||++++.++
T Consensus 108 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 108 NYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp GGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 8884 456789999999999999998653
No 69
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.62 E-value=1e-15 Score=136.73 Aligned_cols=123 Identities=12% Similarity=-0.002 Sum_probs=85.7
Q ss_pred CCCCEEEEECCCCCHHHH----HHHhc-CCCcE--EEEeCCCCC--------------C----ceeeecCCCCC------
Q 025071 114 FNESKALSIGARVGQEVA----ALKLV-GVSDS--IGIDLVPRP--------------P----LVIKGDFHAQP------ 162 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~----~L~~~-g~~~v--~GvD~s~~~--------------~----~~~~aDa~~LP------ 162 (258)
.++.+|||||||+|..+. .+... +...| +|+|+|+.+ . .+..++++.++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 456799999999997653 33332 22233 999987421 1 12344555443
Q ss_pred CCCCCeeEEEec-cccccCChHHHHHHHHhcccCCcEEEEEeccccCc-----Cc----C---CCCCCCChhHHHHHhhc
Q 025071 163 FDNGTFDFEFSN-VFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRA-----DK----Y---SANDLFSVKPLVKLFRE 229 (258)
Q Consensus 163 f~d~SFD~V~s~-~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~-----~~----y---~~~~~~s~~~l~~lf~~ 229 (258)
|++++||+|++. +++|+.++..+++|++|+|||||++++........ .. . .....++.+++.+++.+
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 210 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLDN 210 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHHH
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHHH
Confidence 789999999995 89999999999999999999999999875432110 00 1 11245688999999999
Q ss_pred CceEEee
Q 025071 230 SELVAVR 236 (258)
Q Consensus 230 ~~~~~v~ 236 (258)
.|+..+.
T Consensus 211 aGf~~~~ 217 (292)
T 2aot_A 211 LGLKYEC 217 (292)
T ss_dssp HTCCEEE
T ss_pred CCCceEE
Confidence 9975444
No 70
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.61 E-value=2.9e-15 Score=133.86 Aligned_cols=89 Identities=16% Similarity=0.259 Sum_probs=72.6
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC------------------CCceeeecCCCCCCCCCCeeEEEec--
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR------------------PPLVIKGDFHAQPFDNGTFDFEFSN-- 174 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~------------------~~~~~~aDa~~LPf~d~SFD~V~s~-- 174 (258)
.+.+|||||||+|..+..|++.|. +|+|+|+++. ...++++|+.++|+ +++||+|++.
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~ 159 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSG 159 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHH
T ss_pred CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCc
Confidence 445999999999999999998875 7999999741 23478999999998 7899999863
Q ss_pred cccccC--ChHHHHHHHHhcccCCcEEEEEecc
Q 025071 175 VFDHAL--YPWKFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 175 ~l~h~~--~p~~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
+++|.. +...+++++.|+|||||++++.+..
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 455544 2367899999999999999998653
No 71
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.61 E-value=8.1e-16 Score=136.23 Aligned_cols=90 Identities=16% Similarity=0.202 Sum_probs=78.1
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCC-------------------CceeeecCCCCC---CCCCCeeEEE
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRP-------------------PLVIKGDFHAQP---FDNGTFDFEF 172 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~-------------------~~~~~aDa~~LP---f~d~SFD~V~ 172 (258)
++.+|||||||+|..+..|++.|. +|+|+|+++.. ..+..+|+..+| +++++||+|+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~ 135 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVI 135 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEE
Confidence 678999999999999999998876 89999997421 125778888888 9999999999
Q ss_pred e--ccccccCC-------hHHHHHHHHhcccCCcEEEEEecc
Q 025071 173 S--NVFDHALY-------PWKFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 173 s--~~l~h~~~-------p~~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
+ ++++|+.+ +..++++++|+|||||++++.++.
T Consensus 136 ~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 136 CLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp ECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 8 48999999 899999999999999999988653
No 72
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.61 E-value=1.4e-14 Score=125.28 Aligned_cols=100 Identities=19% Similarity=0.263 Sum_probs=76.7
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------------CCceeeecCCCCCCCCCCe
Q 025071 103 FFQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------------PPLVIKGDFHAQPFDNGTF 168 (258)
Q Consensus 103 ~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------------~~~~~~aDa~~LPf~d~SF 168 (258)
+++.++......++.+|||+|||+|..+..|++.|. +|+|+|+++. ...++++|+.++|++ ++|
T Consensus 29 ~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~f 106 (252)
T 1wzn_A 29 FVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEF 106 (252)
T ss_dssp HHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCE
T ss_pred HHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCc
Confidence 344444433345678999999999999999998875 8999998742 235788999999876 689
Q ss_pred eEEEec--cccccC--ChHHHHHHHHhcccCCcEEEEEec
Q 025071 169 DFEFSN--VFDHAL--YPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 169 D~V~s~--~l~h~~--~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
|+|++. .++|.. ++..+++++.|+|||||.+++.++
T Consensus 107 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 107 DAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp EEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 999974 344432 456789999999999999988654
No 73
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.59 E-value=2.5e-15 Score=130.36 Aligned_cols=121 Identities=17% Similarity=0.136 Sum_probs=91.1
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC------------C-------------------------------
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR------------P------------------------------- 150 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~------------~------------------------------- 150 (258)
.++.+|||||||+|..+..+++.+..+|+|+|+++. .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 466899999999999998888776558999998742 1
Q ss_pred -C-ceeeecCCCCC-CCC---CCeeEEEec-ccc----ccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCC------
Q 025071 151 -P-LVIKGDFHAQP-FDN---GTFDFEFSN-VFD----HALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYS------ 213 (258)
Q Consensus 151 -~-~~~~aDa~~LP-f~d---~SFD~V~s~-~l~----h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~------ 213 (258)
. .+.++|+.+++ +++ ++||+|++. +++ |..++..+++++.|+|||||++++....... .|.
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~--~~~~~~~~~ 212 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS--YYMIGEQKF 212 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC--EEEETTEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCc--eEEcCCccc
Confidence 2 56778888764 466 899999995 777 5557888999999999999999987643211 110
Q ss_pred CCCCCChhHHHHHhhcCceEEee
Q 025071 214 ANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 214 ~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
....++.+++.+++.+.|+..+.
T Consensus 213 ~~~~~~~~~~~~~l~~aGf~~~~ 235 (265)
T 2i62_A 213 SSLPLGWETVRDAVEEAGYTIEQ 235 (265)
T ss_dssp ECCCCCHHHHHHHHHHTTCEEEE
T ss_pred cccccCHHHHHHHHHHCCCEEEE
Confidence 12235778999999999875443
No 74
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.59 E-value=3.8e-16 Score=136.32 Aligned_cols=89 Identities=17% Similarity=0.154 Sum_probs=72.1
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCC--------------CceeeecCCCC--CCCCCCeeEEEec---
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRP--------------PLVIKGDFHAQ--PFDNGTFDFEFSN--- 174 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~--------------~~~~~aDa~~L--Pf~d~SFD~V~s~--- 174 (258)
.+|++|||||||+|..+.++++.+..+++|||+++.. ..++.+|++.+ ++++++||.|+..
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~ 138 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeee
Confidence 5788999999999999999988655689999997521 13566676543 6889999999853
Q ss_pred ---cccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 175 ---VFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 175 ---~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+++|..++..+++|++|||||||++++.
T Consensus 139 ~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred cccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 4677778899999999999999999874
No 75
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.58 E-value=3e-15 Score=127.32 Aligned_cols=120 Identities=9% Similarity=0.005 Sum_probs=86.7
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCC-------------------CCceeeecCCCCCCCCCCeeEEE
Q 025071 113 LFNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPR-------------------PPLVIKGDFHAQPFDNGTFDFEF 172 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~-------------------~~~~~~aDa~~LPf~d~SFD~V~ 172 (258)
..++.+|||||||+|..+..|++.+ ..+|+|+|+++. ...++++|++++|+++++ |.|+
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~ 103 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELH 103 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEE
Confidence 4577899999999999999998763 358999999763 124678999999999888 8777
Q ss_pred ec----cc--cccCChHHHHHHHHhcccCCcEEEEEeccccCcCc---CCCCCC----CChhHHHHHhhcCceE
Q 025071 173 SN----VF--DHALYPWKFVGEIERTLKPAGVCVLHVALSRRADK---YSANDL----FSVKPLVKLFRESELV 233 (258)
Q Consensus 173 s~----~l--~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~---y~~~~~----~s~~~l~~lf~~~~~~ 233 (258)
.. .. +|+.++..+++|++|+|||||++++.+........ ...... +..+++..++.+.|+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 177 (218)
T 3mq2_A 104 VLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWK 177 (218)
T ss_dssp EESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEE
T ss_pred EEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCC
Confidence 42 22 37788899999999999999999997543211110 000001 1234477788888864
No 76
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.58 E-value=1.3e-14 Score=125.33 Aligned_cols=134 Identities=16% Similarity=0.161 Sum_probs=91.3
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC-------------CCceeeecCCC----CCCCCCCeeEEEec
Q 025071 113 LFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR-------------PPLVIKGDFHA----QPFDNGTFDFEFSN 174 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~-------------~~~~~~aDa~~----LPf~d~SFD~V~s~ 174 (258)
+.++.+|||+|||+|..+..+++. |...|+|+|+++. ...++.+|+.. +|+. ++||+|+.
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~- 149 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYE- 149 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEE-
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEE-
Confidence 557889999999999999998875 5458999998742 12367789888 8887 89999994
Q ss_pred cccccCCh---HHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEee--eecCCCCe-EEEE
Q 025071 175 VFDHALYP---WKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVR--KVDGFGLD-TEVV 248 (258)
Q Consensus 175 ~l~h~~~p---~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~--~v~g~~l~-~~~~ 248 (258)
+..+| ..+++++.|+|||||++++.+............ .+..+++. ++.+.|+..+. .++.+.-+ -.++
T Consensus 150 ---~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~-~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~v~ 224 (230)
T 1fbn_A 150 ---DVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPK-EIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHVMFV 224 (230)
T ss_dssp ---CCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHH-HHHHHHHH-HHHHHTEEEEEEEECTTTSTTEEEEE
T ss_pred ---ecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHH-HhhHHHHH-HHHHCCCEEEEEEccCCCccceEEEE
Confidence 34556 677999999999999998874321100000001 11235666 77877765444 44444333 4678
Q ss_pred EEeCC
Q 025071 249 FRKKK 253 (258)
Q Consensus 249 f~K~~ 253 (258)
++|+.
T Consensus 225 ~~k~~ 229 (230)
T 1fbn_A 225 GIWEG 229 (230)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 88764
No 77
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.58 E-value=1.7e-14 Score=119.51 Aligned_cols=123 Identities=13% Similarity=0.122 Sum_probs=94.9
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC------CCceeeecCCCCCCCCCCeeEEEec-cccccCCh----
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHALYP---- 182 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~p---- 182 (258)
.++.+|||+|||+|..+..+++.+ +|+|+|+++. ...++++|+.+ |+++++||+|+++ .+.+..++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~~~~ 98 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALESHRGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDDPIIG 98 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHTCSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCCTTTB
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhcccCCeEEECChhh-hcccCCCCEEEECCCCccCCcccccc
Confidence 356799999999999999999887 8999999753 34688999988 8888999999997 45544333
Q ss_pred -----HHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEeeee-cCCCCeEEEEEEe
Q 025071 183 -----WKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVRKV-DGFGLDTEVVFRK 251 (258)
Q Consensus 183 -----~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~~v-~g~~l~~~~~f~K 251 (258)
..+++++.+.| |||++++..... ...+++.+++++.|+...... ..+++++.++.+.
T Consensus 99 ~~~~~~~~~~~~~~~l-pgG~l~~~~~~~-----------~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~~ 161 (170)
T 3q87_B 99 GGYLGREVIDRFVDAV-TVGMLYLLVIEA-----------NRPKEVLARLEERGYGTRILKVRKILGETVYIIKG 161 (170)
T ss_dssp CCGGGCHHHHHHHHHC-CSSEEEEEEEGG-----------GCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEEEE
T ss_pred CCcchHHHHHHHHhhC-CCCEEEEEEecC-----------CCHHHHHHHHHHCCCcEEEEEeeccCCceEEEEEE
Confidence 56889999999 999998875421 146889999999987654433 4667777666655
No 78
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.58 E-value=3.3e-14 Score=121.57 Aligned_cols=135 Identities=16% Similarity=0.117 Sum_probs=95.8
Q ss_pred cCCCCCCEEEEECCC-CCHHHHHHHhcCCCcEEEEeCCCC--------------CCceeeecCCC-CCCCCCCeeEEEec
Q 025071 111 HFLFNESKALSIGAR-VGQEVAALKLVGVSDSIGIDLVPR--------------PPLVIKGDFHA-QPFDNGTFDFEFSN 174 (258)
Q Consensus 111 ~~l~~~~~VLDIGcG-tG~~~~~L~~~g~~~v~GvD~s~~--------------~~~~~~aDa~~-LPf~d~SFD~V~s~ 174 (258)
..+.++.+|||+||| +|..+..+++.+..+|+|+|+++. ...++++|+.. .++++++||+|+++
T Consensus 51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~n 130 (230)
T 3evz_A 51 TFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSA 130 (230)
T ss_dssp TTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEEC
T ss_pred hhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEEC
Confidence 346788999999999 999999988762348999998742 24577888643 36778999999996
Q ss_pred -cccccCC-------------------hHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceE-
Q 025071 175 -VFDHALY-------------------PWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELV- 233 (258)
Q Consensus 175 -~l~h~~~-------------------p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~- 233 (258)
.+.+..+ ...+++++.|+|||||++++.++... ...+++.+++++.|+.
T Consensus 131 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----------~~~~~~~~~l~~~g~~~ 200 (230)
T 3evz_A 131 PPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE----------KLLNVIKERGIKLGYSV 200 (230)
T ss_dssp CCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH----------HHHHHHHHHHHHTTCEE
T ss_pred CCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH----------hHHHHHHHHHHHcCCce
Confidence 3322211 36789999999999999999765210 1357788899888863
Q ss_pred -EeeeecCCCCeEEEEEEeCCcC
Q 025071 234 -AVRKVDGFGLDTEVVFRKKKKK 255 (258)
Q Consensus 234 -~v~~v~g~~l~~~~~f~K~~~~ 255 (258)
.+....|......++|+|.++.
T Consensus 201 ~~~~~~~g~~~~~~l~f~~~~~~ 223 (230)
T 3evz_A 201 KDIKFKVGTRWRHSLIFFKGISE 223 (230)
T ss_dssp EEEEECCCC-CEEEEEEECCC--
T ss_pred EEEEecCCCeEEEEEEEeccccc
Confidence 3333356666689999986654
No 79
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.58 E-value=5.6e-15 Score=127.04 Aligned_cols=104 Identities=13% Similarity=0.104 Sum_probs=83.5
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------CCceeeecC-CCCCCC-CCCeeEEEeccccccC
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------PPLVIKGDF-HAQPFD-NGTFDFEFSNVFDHAL 180 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------~~~~~~aDa-~~LPf~-d~SFD~V~s~~l~h~~ 180 (258)
+.++.+|||||||+|..+..+++.|. +|+|+|+++. ...++++|+ +.+|++ +++||+|+++ .
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-----~ 119 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-----R 119 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-----S
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-----C
Confidence 45788999999999999999998874 8999999752 245788999 789999 9999999996 3
Q ss_pred ChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEE
Q 025071 181 YPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVA 234 (258)
Q Consensus 181 ~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~ 234 (258)
++..+++++.|+|||||+++... ...+.+++.+++.++|+..
T Consensus 120 ~~~~~l~~~~~~LkpgG~l~~~~------------~~~~~~~~~~~l~~~Gf~~ 161 (226)
T 3m33_A 120 GPTSVILRLPELAAPDAHFLYVG------------PRLNVPEVPERLAAVGWDI 161 (226)
T ss_dssp CCSGGGGGHHHHEEEEEEEEEEE------------SSSCCTHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHHcCCCcEEEEeC------------CcCCHHHHHHHHHHCCCeE
Confidence 56778899999999999998211 1224577888888877654
No 80
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.57 E-value=4.4e-15 Score=133.26 Aligned_cols=138 Identities=17% Similarity=0.274 Sum_probs=94.6
Q ss_pred CCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC--------------------------------------------
Q 025071 115 NESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR-------------------------------------------- 149 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~-------------------------------------------- 149 (258)
++.+|||||||+|..+..+++. +..+|+|+|+++.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 5789999999999999998875 4468999998631
Q ss_pred -----------------------------CCceeeecCCCCC-----CCCCCeeEEEec-cccccC------ChHHHHHH
Q 025071 150 -----------------------------PPLVIKGDFHAQP-----FDNGTFDFEFSN-VFDHAL------YPWKFVGE 188 (258)
Q Consensus 150 -----------------------------~~~~~~aDa~~LP-----f~d~SFD~V~s~-~l~h~~------~p~~~l~E 188 (258)
...+.++|+...+ +.+++||+|+|. +++|+. ++.+++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 1235667766544 788999999995 565553 67789999
Q ss_pred HHhcccCCcEEEEEeccc---cCcC--------cCCCCCCCChhHHHHHhhc--CceEEeeeecC-----CCCe-EEEEE
Q 025071 189 IERTLKPAGVCVLHVALS---RRAD--------KYSANDLFSVKPLVKLFRE--SELVAVRKVDG-----FGLD-TEVVF 249 (258)
Q Consensus 189 i~RVLKPGG~lii~v~~~---~~~~--------~y~~~~~~s~~~l~~lf~~--~~~~~v~~v~g-----~~l~-~~~~f 249 (258)
++|+|||||++++....- .... .|. .-.+..+++.+++.+ +|+..+..+.. .+.+ ...+|
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~-~~~~~p~~~~~~L~~~~~GF~~~~~~~~~~~~~~g~~r~i~~~ 284 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYY-RIQLKPEQFSSYLTSPDVGFSSYELVATPHNTSKGFQRPVYLF 284 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHH-HCCCCGGGHHHHHTSTTTCCCEEEEC-----------CCCEEE
T ss_pred HHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhh-cEEEcHHHHHHHHHhcCCCceEEEEeccCCCCCCCccceEEEE
Confidence 999999999999863210 0000 011 011356889999998 89876665532 2232 37788
Q ss_pred EeCC
Q 025071 250 RKKK 253 (258)
Q Consensus 250 ~K~~ 253 (258)
+|+.
T Consensus 285 ~k~~ 288 (292)
T 3g07_A 285 HKAR 288 (292)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 8864
No 81
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.57 E-value=1.3e-15 Score=131.70 Aligned_cols=90 Identities=17% Similarity=0.159 Sum_probs=71.4
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------------CCceeeecCCCC--CCCCCCeeEEEe-c-
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------------PPLVIKGDFHAQ--PFDNGTFDFEFS-N- 174 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------------~~~~~~aDa~~L--Pf~d~SFD~V~s-~- 174 (258)
..++.+|||||||+|..+..+++.+..+|+|+|+++. ...++++|++++ ||++++||+|++ .
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 3567899999999999999998766568999998742 124678899888 999999999999 3
Q ss_pred cc----cccCChHHHHHHHHhcccCCcEEEEE
Q 025071 175 VF----DHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 175 ~l----~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
.+ .|..++..+++|++|+|||||++++.
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 22 12223446789999999999999875
No 82
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.56 E-value=5.2e-15 Score=127.76 Aligned_cols=111 Identities=13% Similarity=-0.007 Sum_probs=83.4
Q ss_pred hhhCchhHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC------------CCce
Q 025071 86 AVWTTRDWERKVRVFSRFFQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR------------PPLV 153 (258)
Q Consensus 86 ~~W~~~~w~~~~~~~~~~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~------------~~~~ 153 (258)
.+|+...|....... ..+. ..+.++.+|||||||+|..+..|++.+. +|+|+|+++. ...+
T Consensus 33 ~~~~~~~~~~~~~~~----~~~~--~~~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~ 105 (245)
T 3ggd_A 33 VLWDANVERAVVVDL----PRFE--LLFNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTAANISY 105 (245)
T ss_dssp CTTCCCGGGTHHHHH----HHHT--TTSCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCCTTEEE
T ss_pred ceecchhHHHHHHHH----HHHh--hccCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcccCceE
Confidence 467766665443322 2221 2356778999999999999999998876 8999998742 2357
Q ss_pred eeecCCCCCCCC-----CCeeEEEec-cccccC--ChHHHHHHHHhcccCCcEEEEEe
Q 025071 154 IKGDFHAQPFDN-----GTFDFEFSN-VFDHAL--YPWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 154 ~~aDa~~LPf~d-----~SFD~V~s~-~l~h~~--~p~~~l~Ei~RVLKPGG~lii~v 203 (258)
+++|+.++++.. .+||+|+++ +++|+. ++..+++++.|+|||||++++..
T Consensus 106 ~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 106 RLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp EECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred EECcccccccccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 888988876543 359999995 778887 67899999999999999987764
No 83
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.54 E-value=1e-13 Score=128.07 Aligned_cols=142 Identities=15% Similarity=0.175 Sum_probs=99.6
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCC-----------C----CCceeeecCCCC--CCCCCCeeEEEec-
Q 025071 114 FNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVP-----------R----PPLVIKGDFHAQ--PFDNGTFDFEFSN- 174 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~-----------~----~~~~~~aDa~~L--Pf~d~SFD~V~s~- 174 (258)
....+|||||||+|..+..+++. +..+++++|+.. . ...++.+|+.+. |++ ++||+|++.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~ 256 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQ 256 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEES
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEec
Confidence 35679999999999999998764 334799999721 0 134678898875 676 789999995
Q ss_pred cccccCChH--HHHHHHHhcccCCcEEEEEeccccCcC------------------cCCCCCCCChhHHHHHhhcCceEE
Q 025071 175 VFDHALYPW--KFVGEIERTLKPAGVCVLHVALSRRAD------------------KYSANDLFSVKPLVKLFRESELVA 234 (258)
Q Consensus 175 ~l~h~~~p~--~~l~Ei~RVLKPGG~lii~v~~~~~~~------------------~y~~~~~~s~~~l~~lf~~~~~~~ 234 (258)
+++|+.++. +++++++|+|||||++++......... .......++.+++.++++++|+..
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~ 336 (363)
T 3dp7_A 257 FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEV 336 (363)
T ss_dssp CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEE
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeE
Confidence 788877664 678999999999999988643221100 011234578999999999999988
Q ss_pred eeeecCCCC-eEEEEEEeCCcCC
Q 025071 235 VRKVDGFGL-DTEVVFRKKKKKS 256 (258)
Q Consensus 235 v~~v~g~~l-~~~~~f~K~~~~~ 256 (258)
+......+. .+.+..+|.....
T Consensus 337 v~~~~~~g~~~svi~~~~~~~~~ 359 (363)
T 3dp7_A 337 EEIQDNIGLGHSILQCRLKEGHH 359 (363)
T ss_dssp SCCCCCBTTTBEEEEEEEC----
T ss_pred EEEEeCCCCCceEEEEeeccccc
Confidence 776643333 3666666654433
No 84
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.54 E-value=5e-14 Score=113.40 Aligned_cols=93 Identities=19% Similarity=0.222 Sum_probs=75.6
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhc-CC-CcEEEEeCCCC----CCceeeecCCCCC--------CCCCCeeEEEec-cc
Q 025071 112 FLFNESKALSIGARVGQEVAALKLV-GV-SDSIGIDLVPR----PPLVIKGDFHAQP--------FDNGTFDFEFSN-VF 176 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~-g~-~~v~GvD~s~~----~~~~~~aDa~~LP--------f~d~SFD~V~s~-~l 176 (258)
.+.++.+|||+|||+|..+..+++. |. .+++|+|+++. ...+.++|+.+++ +++++||+|+++ .+
T Consensus 19 ~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~ 98 (180)
T 1ej0_A 19 LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAP 98 (180)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCCTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccccCcEEEEEcccccchhhhhhhccCCCCceeEEEECCCc
Confidence 3567889999999999999988875 42 58999999871 1246788998887 888999999996 55
Q ss_pred cccCCh-----------HHHHHHHHhcccCCcEEEEEec
Q 025071 177 DHALYP-----------WKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 177 ~h~~~p-----------~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
++..++ ..+++++.|+|||||.+++...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 99 NMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 555555 6889999999999999998754
No 85
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.54 E-value=2.1e-13 Score=124.95 Aligned_cols=142 Identities=13% Similarity=0.061 Sum_probs=99.3
Q ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCC-------------CCCceeeecCCCCCCCCCCeeEE
Q 025071 106 DLKQRHFLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVP-------------RPPLVIKGDFHAQPFDNGTFDFE 171 (258)
Q Consensus 106 ~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~-------------~~~~~~~aDa~~LPf~d~SFD~V 171 (258)
.+++...+.++.+|||||||+|..+..+++. +...++++|++. ....++.+|+. .|++ +||+|
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v 251 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFL-REVP--HADVH 251 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEE
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCC-CCCC--CCcEE
Confidence 3444444567789999999999999988764 334689999631 01246788885 3444 89999
Q ss_pred Eec-cccccCCh--HHHHHHHHhcccCCcEEEEEeccccCc--Cc-----------CCCCCCCChhHHHHHhhcCceEEe
Q 025071 172 FSN-VFDHALYP--WKFVGEIERTLKPAGVCVLHVALSRRA--DK-----------YSANDLFSVKPLVKLFRESELVAV 235 (258)
Q Consensus 172 ~s~-~l~h~~~p--~~~l~Ei~RVLKPGG~lii~v~~~~~~--~~-----------y~~~~~~s~~~l~~lf~~~~~~~v 235 (258)
++. +++|+.++ .++++|++|+|||||++++........ .. ......++.+++.++++++|+..+
T Consensus 252 ~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 331 (348)
T 3lst_A 252 VLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLD 331 (348)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEE
T ss_pred EEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceE
Confidence 995 88888887 589999999999999998874322111 00 112234689999999999998877
Q ss_pred eeecCCCCeEEEEEE
Q 025071 236 RKVDGFGLDTEVVFR 250 (258)
Q Consensus 236 ~~v~g~~l~~~~~f~ 250 (258)
......+....+..+
T Consensus 332 ~~~~~~~~~~vie~~ 346 (348)
T 3lst_A 332 RVVGTSSVMSIAVGV 346 (348)
T ss_dssp EEEECSSSCEEEEEE
T ss_pred EEEECCCCcEEEEEE
Confidence 665533443444444
No 86
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.53 E-value=1.1e-14 Score=132.39 Aligned_cols=90 Identities=12% Similarity=0.079 Sum_probs=67.6
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCC---------------------CceeeecC------CCC--CCCC
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRP---------------------PLVIKGDF------HAQ--PFDN 165 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~---------------------~~~~~aDa------~~L--Pf~d 165 (258)
++.+|||||||+|..+..+...+..+|+|+|+|+.+ ..+.++|+ +++ ++++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 578999999999987665555555689999997521 11345555 333 4778
Q ss_pred CCeeEEEec-ccccc---CChHHHHHHHHhcccCCcEEEEEec
Q 025071 166 GTFDFEFSN-VFDHA---LYPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 166 ~SFD~V~s~-~l~h~---~~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
++||+|+|. +++|+ .+...+++|++|+|||||++++.++
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 999999985 66654 3457899999999999999998865
No 87
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.53 E-value=1.6e-13 Score=123.89 Aligned_cols=125 Identities=15% Similarity=0.218 Sum_probs=93.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCC---------------CCCceeeecCCCCCCCCCCeeEEEe-ccc
Q 025071 114 FNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVP---------------RPPLVIKGDFHAQPFDNGTFDFEFS-NVF 176 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~---------------~~~~~~~aDa~~LPf~d~SFD~V~s-~~l 176 (258)
.++.+|||||||+|..+..+++. +..+++|+|++. ....++.+|+.+.|++++ ||+|++ +++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l 242 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNFL 242 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcchh
Confidence 57789999999999999988865 234899999861 013467889988888765 999999 588
Q ss_pred cccCCh--HHHHHHHHhcccCCcEEEEEeccccCcCc-------C--------CCCCCCChhHHHHHhhcCceEEeeeec
Q 025071 177 DHALYP--WKFVGEIERTLKPAGVCVLHVALSRRADK-------Y--------SANDLFSVKPLVKLFRESELVAVRKVD 239 (258)
Q Consensus 177 ~h~~~p--~~~l~Ei~RVLKPGG~lii~v~~~~~~~~-------y--------~~~~~~s~~~l~~lf~~~~~~~v~~v~ 239 (258)
+|+.++ ..+++++.|+|||||++++.......... + .....++.+++.++++++|+..+...+
T Consensus 243 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~~ 322 (335)
T 2r3s_A 243 HHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLHS 322 (335)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEEE
Confidence 888655 58899999999999998887443211100 0 134557899999999999986665443
No 88
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.53 E-value=4.2e-14 Score=118.34 Aligned_cols=94 Identities=17% Similarity=0.186 Sum_probs=72.9
Q ss_pred cCCCCCCEEEEECCCCCHHHHHHHhc-C--CCcEEEEeCCCCC----CceeeecCCCCC---------------------
Q 025071 111 HFLFNESKALSIGARVGQEVAALKLV-G--VSDSIGIDLVPRP----PLVIKGDFHAQP--------------------- 162 (258)
Q Consensus 111 ~~l~~~~~VLDIGcGtG~~~~~L~~~-g--~~~v~GvD~s~~~----~~~~~aDa~~LP--------------------- 162 (258)
..+.++.+|||+|||+|..+..+++. + ..+|+|+|+++.. ..++++|+.+++
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~ 97 (201)
T 2plw_A 18 LFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYK 97 (201)
T ss_dssp CCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCCTTCEEEECCTTTTSSCCC-----------CHHHHH
T ss_pred CCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCCCCceEEEccccchhhhhhccccccccccchhhHHH
Confidence 34677889999999999999998864 3 3589999998742 357889998887
Q ss_pred ----CCCCCeeEEEec-ccccc----CChH-------HHHHHHHhcccCCcEEEEEec
Q 025071 163 ----FDNGTFDFEFSN-VFDHA----LYPW-------KFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 163 ----f~d~SFD~V~s~-~l~h~----~~p~-------~~l~Ei~RVLKPGG~lii~v~ 204 (258)
+++++||+|+++ .+++. .+.. .+++++.|+|||||.+++.+.
T Consensus 98 ~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 98 LKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp HHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 788899999996 34332 2222 378999999999999988653
No 89
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.52 E-value=2.8e-14 Score=119.24 Aligned_cols=127 Identities=17% Similarity=0.165 Sum_probs=87.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCCC--------------CceeeecCCCCCCCC-----CCeeEEEe
Q 025071 114 FNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPRP--------------PLVIKGDFHAQPFDN-----GTFDFEFS 173 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~~--------------~~~~~aDa~~LPf~d-----~SFD~V~s 173 (258)
.++.+|||+|||+|..+..+++.+ ..+++|+|+++.. ..++++|+.+ ++++ ++||+|++
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRPWHAIVS 107 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-HHHHHHHTTCCBSEEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCcccEEEE
Confidence 577899999999999999988764 2489999997532 2345667666 7776 99999999
Q ss_pred c-cc------cccCC------h--------------HHHHHHHHhcccCCcE-EEEEeccccCcCcCCCCCCCChhHHHH
Q 025071 174 N-VF------DHALY------P--------------WKFVGEIERTLKPAGV-CVLHVALSRRADKYSANDLFSVKPLVK 225 (258)
Q Consensus 174 ~-~l------~h~~~------p--------------~~~l~Ei~RVLKPGG~-lii~v~~~~~~~~y~~~~~~s~~~l~~ 225 (258)
+ .+ +|+.. | ..+++++.|+|||||+ +++.++. ...+++.+
T Consensus 108 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------------~~~~~~~~ 175 (215)
T 4dzr_A 108 NPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH------------NQADEVAR 175 (215)
T ss_dssp CCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT------------SCHHHHHH
T ss_pred CCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC------------ccHHHHHH
Confidence 5 11 22111 1 6678999999999999 5554431 13578888
Q ss_pred Hhh--cCceEEeeee-cCCCCeEEEEEEeCC
Q 025071 226 LFR--ESELVAVRKV-DGFGLDTEVVFRKKK 253 (258)
Q Consensus 226 lf~--~~~~~~v~~v-~g~~l~~~~~f~K~~ 253 (258)
++. +.|+..+... +..+..+.++.+|++
T Consensus 176 ~l~~~~~gf~~~~~~~~~~~~~r~~~~~~~~ 206 (215)
T 4dzr_A 176 LFAPWRERGFRVRKVKDLRGIDRVIAVTREP 206 (215)
T ss_dssp HTGGGGGGTEECCEEECTTSCEEEEEEEECC
T ss_pred HHHHhhcCCceEEEEEecCCCEEEEEEEEcC
Confidence 998 8887766544 355566777777644
No 90
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.52 E-value=1.2e-14 Score=138.39 Aligned_cols=100 Identities=16% Similarity=0.204 Sum_probs=80.2
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHh-cCCCcEEEEeCCC------------------------CCCceeeec
Q 025071 103 FFQDLKQRHFLFNESKALSIGARVGQEVAALKL-VGVSDSIGIDLVP------------------------RPPLVIKGD 157 (258)
Q Consensus 103 ~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~-~g~~~v~GvD~s~------------------------~~~~~~~aD 157 (258)
.+..+++...+.++.+|||||||+|..+..++. .|...|+|||+++ ....++++|
T Consensus 161 ~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD 240 (438)
T 3uwp_A 161 LVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD 240 (438)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence 344455544677899999999999999988875 5665699999974 123478999
Q ss_pred CCCCCCCC--CCeeEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 158 FHAQPFDN--GTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 158 a~~LPf~d--~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+.++||.+ ++||+|+++.+.+..+....++|++|+|||||++++.
T Consensus 241 ~~~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 241 FLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp TTSHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEES
T ss_pred ccCCccccccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEe
Confidence 99999976 5899999975445567788899999999999999986
No 91
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.51 E-value=1.7e-14 Score=129.76 Aligned_cols=92 Identities=15% Similarity=0.147 Sum_probs=73.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------------CCceeeecCCCCC----CC--C
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------------PPLVIKGDFHAQP----FD--N 165 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------------~~~~~~aDa~~LP----f~--d 165 (258)
.++.+|||+|||+|..+..+++.+..+++|+|+++. ...++++|++.+| |+ +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 467899999999999999888765568999998742 1246889999887 74 4
Q ss_pred CCeeEEEec-ccccc----CChHHHHHHHHhcccCCcEEEEEecc
Q 025071 166 GTFDFEFSN-VFDHA----LYPWKFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 166 ~SFD~V~s~-~l~h~----~~p~~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
++||+|+++ +++|+ .++..+++++.|+|||||.+++.++.
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 599999995 77776 34568999999999999999998663
No 92
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.51 E-value=3.9e-14 Score=117.25 Aligned_cols=92 Identities=13% Similarity=0.106 Sum_probs=69.1
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCC-CCCCCeeEEEec-
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQP-FDNGTFDFEFSN- 174 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LP-f~d~SFD~V~s~- 174 (258)
.+.++.+|||+|||+|..+..|++.+ .+|+|+|+++. ...+++++.+.++ +.+++||+|+++
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGLS-KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNL 97 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeC
Confidence 45678999999999999999999875 58999999752 1235666776654 568899999985
Q ss_pred -cccc--------cCChHHHHHHHHhcccCCcEEEEEec
Q 025071 175 -VFDH--------ALYPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 175 -~l~h--------~~~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
.+.+ ..+...+++++.|+|||||++++.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 2221 12345678999999999999988753
No 93
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.51 E-value=3.1e-13 Score=113.84 Aligned_cols=108 Identities=15% Similarity=0.089 Sum_probs=83.5
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEecc
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSNV 175 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~~ 175 (258)
.+.++.+|||+|||+|..+..+++.+ ..+|+|+|+++. ...++++|+.+.....++||+|+++.
T Consensus 37 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~ 116 (204)
T 3e05_A 37 RLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGG 116 (204)
T ss_dssp TCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESC
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECC
Confidence 45678899999999999999998765 358999998742 13467788866555557899999963
Q ss_pred ccccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCce
Q 025071 176 FDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESEL 232 (258)
Q Consensus 176 l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~ 232 (258)
..+ ++..+++++.|+|||||++++..... .+.+++.+++++.|+
T Consensus 117 ~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~-----------~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 117 SGG--MLEEIIDAVDRRLKSEGVIVLNAVTL-----------DTLTKAVEFLEDHGY 160 (204)
T ss_dssp CTT--CHHHHHHHHHHHCCTTCEEEEEECBH-----------HHHHHHHHHHHHTTC
T ss_pred CCc--CHHHHHHHHHHhcCCCeEEEEEeccc-----------ccHHHHHHHHHHCCC
Confidence 222 78899999999999999999975421 135778888888885
No 94
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.50 E-value=4e-14 Score=121.74 Aligned_cols=90 Identities=17% Similarity=0.156 Sum_probs=68.4
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC-------------CCceeeecCCC----CCCCCCCeeEEEec
Q 025071 113 LFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR-------------PPLVIKGDFHA----QPFDNGTFDFEFSN 174 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~-------------~~~~~~aDa~~----LPf~d~SFD~V~s~ 174 (258)
+.++.+|||+|||+|..+..+++. |...|+|+|+++. ...++++|+.. .|+. ++||+|+++
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~ 133 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIV-EKVDLIYQD 133 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTC-CCEEEEEEC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccc-cceeEEEEe
Confidence 467889999999999999888864 3347999999853 12345678776 3665 899999997
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEEec
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
..++ .+...+++|++|+|||||++++.+.
T Consensus 134 ~~~~-~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 134 IAQK-NQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp CCST-THHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCh-hHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 4332 2334458999999999999999864
No 95
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.50 E-value=8.4e-13 Score=119.54 Aligned_cols=143 Identities=12% Similarity=0.124 Sum_probs=99.8
Q ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCCC----------------CceeeecCCCCCCCCCC
Q 025071 105 QDLKQRHFLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPRP----------------PLVIKGDFHAQPFDNGT 167 (258)
Q Consensus 105 ~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~~----------------~~~~~aDa~~LPf~d~S 167 (258)
..+++...+.+ .+|||||||+|..+..+++. +..+++++|+ +.. ..++.+|+.+ |++ ++
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~ 233 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SN 233 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SS
T ss_pred HHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CC
Confidence 34444333455 89999999999999988764 3347999998 532 2467788876 666 68
Q ss_pred eeEEEec-cccccCChH--HHHHHHHhcccCCcEEEEEeccccCcCc------C-------CCCCCCChhHHHHHhhcCc
Q 025071 168 FDFEFSN-VFDHALYPW--KFVGEIERTLKPAGVCVLHVALSRRADK------Y-------SANDLFSVKPLVKLFRESE 231 (258)
Q Consensus 168 FD~V~s~-~l~h~~~p~--~~l~Ei~RVLKPGG~lii~v~~~~~~~~------y-------~~~~~~s~~~l~~lf~~~~ 231 (258)
||+|++. +++|+.++. .++++++|+|||||++++.......... + .....++.+++.++++++|
T Consensus 234 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG 313 (334)
T 2ip2_A 234 GDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGG 313 (334)
T ss_dssp CSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTT
T ss_pred CCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCC
Confidence 9999995 788887766 8899999999999999987432211000 0 1133468899999999999
Q ss_pred eEEeeeecCCCCeEEEEEEe
Q 025071 232 LVAVRKVDGFGLDTEVVFRK 251 (258)
Q Consensus 232 ~~~v~~v~g~~l~~~~~f~K 251 (258)
+..+......+....++.+|
T Consensus 314 f~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 314 FAVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp EEEEEEEEETTTEEEEEEEE
T ss_pred CceeEEEECCCCCEEEEEEe
Confidence 87665443223335555554
No 96
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.50 E-value=5.7e-13 Score=121.62 Aligned_cols=90 Identities=17% Similarity=0.067 Sum_probs=71.4
Q ss_pred cCCCCCCEEEEECCCCCHHH-HHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEec
Q 025071 111 HFLFNESKALSIGARVGQEV-AALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSN 174 (258)
Q Consensus 111 ~~l~~~~~VLDIGcGtG~~~-~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~ 174 (258)
..+.++.+|||||||+|..+ ..+++....+|+|+|+++. ...++++|+.++| +++||+|++.
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~ 195 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVA 195 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEEC
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEEC
Confidence 45778999999999998765 4455532258999998742 2347889998876 7999999986
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEEec
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
++ ..++.++++|+.|+|||||++++...
T Consensus 196 a~--~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 196 AL--AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp TT--CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CC--ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 43 56888999999999999999998653
No 97
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.50 E-value=8.2e-14 Score=120.97 Aligned_cols=130 Identities=12% Similarity=-0.012 Sum_probs=92.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC---------------CCceeeecCCCCCCC---CCCeeEEEec
Q 025071 114 FNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR---------------PPLVIKGDFHAQPFD---NGTFDFEFSN 174 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~---d~SFD~V~s~ 174 (258)
.++.+|||||||+|..+..++.. +..+|+|+|+++. ...++++|+++++++ +++||+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 46789999999999999888853 3358999999751 234778899888875 7899999996
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceE--EeeeecC---CCCeEEEEE
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELV--AVRKVDG---FGLDTEVVF 249 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~--~v~~v~g---~~l~~~~~f 249 (258)
.+ .++..+++++.|+|||||++++..... + .....++.+.+++.|+. .+..+.- .+-...+++
T Consensus 149 ~~---~~~~~~l~~~~~~LkpgG~l~~~~g~~-----~----~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~ 216 (240)
T 1xdz_A 149 AV---ARLSVLSELCLPLVKKNGLFVALKAAS-----A----EEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVI 216 (240)
T ss_dssp CC---SCHHHHHHHHGGGEEEEEEEEEEECC------C----HHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEE
T ss_pred cc---CCHHHHHHHHHHhcCCCCEEEEEeCCC-----c----hHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEE
Confidence 53 567899999999999999998863210 0 01235567778888764 3333321 122357788
Q ss_pred EeCCcC
Q 025071 250 RKKKKK 255 (258)
Q Consensus 250 ~K~~~~ 255 (258)
+|.+.+
T Consensus 217 ~k~~~~ 222 (240)
T 1xdz_A 217 RKIKNT 222 (240)
T ss_dssp EECSCC
T ss_pred EecCCC
Confidence 886554
No 98
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.50 E-value=7.1e-13 Score=122.88 Aligned_cols=137 Identities=13% Similarity=0.081 Sum_probs=97.7
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCC--------CCCceeeecCCCCCCCCCCeeEEEec-cccccCCh
Q 025071 113 LFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVP--------RPPLVIKGDFHAQPFDNGTFDFEFSN-VFDHALYP 182 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~--------~~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~p 182 (258)
+.+..+|||||||+|..+..+++. +..+++++|+.. ....++.+|+.+ |++++ |+|++. +++|+.++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~~ 277 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSDE 277 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-CCCCC--SEEEEESCGGGBCHH
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhcCCCEEEecCCCC-CCCCC--CEEEEechhhcCCHH
Confidence 456789999999999999998764 334799999721 123578889887 88765 999985 78888765
Q ss_pred H--HHHHHHHhcccCCcEEEEEeccccCc--Cc----------------CCCCCCCChhHHHHHhhcCceEEeeeecCCC
Q 025071 183 W--KFVGEIERTLKPAGVCVLHVALSRRA--DK----------------YSANDLFSVKPLVKLFRESELVAVRKVDGFG 242 (258)
Q Consensus 183 ~--~~l~Ei~RVLKPGG~lii~v~~~~~~--~~----------------y~~~~~~s~~~l~~lf~~~~~~~v~~v~g~~ 242 (258)
. +++++++|+|||||++++........ .. ......++.+++.++++++|+..+......+
T Consensus 278 ~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~ 357 (368)
T 3reo_A 278 HCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAF 357 (368)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEEEEET
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEEEEeCC
Confidence 4 67999999999999998874321110 00 0123446889999999999987776554334
Q ss_pred CeEEEEEEeC
Q 025071 243 LDTEVVFRKK 252 (258)
Q Consensus 243 l~~~~~f~K~ 252 (258)
....+.+.|+
T Consensus 358 ~~~vie~~k~ 367 (368)
T 3reo_A 358 NTYVMEFLKT 367 (368)
T ss_dssp TEEEEEEECC
T ss_pred CcEEEEEEeC
Confidence 4455666653
No 99
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.50 E-value=1e-13 Score=116.75 Aligned_cols=123 Identities=14% Similarity=0.153 Sum_probs=91.1
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEec-cc
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSN-VF 176 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l 176 (258)
+.++.+|||+|||+|..+..+++.|..+|+|+|+++. ...+.++|+.+ +.+++||+|+++ .+
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~~~~~fD~i~~~~~~ 135 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA--DVDGKFDLIVANILA 135 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT--TCCSCEEEEEEESCH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc--cCCCCceEEEECCcH
Confidence 4577899999999999999999887668999998642 13467777754 457899999996 44
Q ss_pred cccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEeeeecCCCCeEEEEEEe
Q 025071 177 DHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVRKVDGFGLDTEVVFRK 251 (258)
Q Consensus 177 ~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~~v~g~~l~~~~~f~K 251 (258)
++ ...+++++.|+|||||++++...... +.+++.+++++.|+..+......+..+.+..+|
T Consensus 136 ~~---~~~~l~~~~~~L~~gG~l~~~~~~~~-----------~~~~~~~~~~~~Gf~~~~~~~~~~w~~~~~~~~ 196 (205)
T 3grz_A 136 EI---LLDLIPQLDSHLNEDGQVIFSGIDYL-----------QLPKIEQALAENSFQIDLKMRAGRWIGLAISRK 196 (205)
T ss_dssp HH---HHHHGGGSGGGEEEEEEEEEEEEEGG-----------GHHHHHHHHHHTTEEEEEEEEETTEEEEEEEEC
T ss_pred HH---HHHHHHHHHHhcCCCCEEEEEecCcc-----------cHHHHHHHHHHcCCceEEeeccCCEEEEEEecc
Confidence 44 36788999999999999988632210 368899999999987766554434434444444
No 100
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.50 E-value=6.6e-13 Score=121.07 Aligned_cols=146 Identities=13% Similarity=0.143 Sum_probs=103.3
Q ss_pred HHHHhcCCCC-CCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC---------------CCceeeecCCCCC-CCCCC
Q 025071 106 DLKQRHFLFN-ESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR---------------PPLVIKGDFHAQP-FDNGT 167 (258)
Q Consensus 106 ~L~~~~~l~~-~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~---------------~~~~~~aDa~~LP-f~d~S 167 (258)
.+++.....+ +.+|||||||+|..+..+++. +..+++++|+... ...++.+|+.+.+ +.++.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 248 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGA 248 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCC
Confidence 3444333445 789999999999999988764 3357999998320 1346788888776 24567
Q ss_pred eeEEEec-cccccCCh--HHHHHHHHhcccCCcEEEEEeccccCc---C------------cCCCCCCCChhHHHHHhhc
Q 025071 168 FDFEFSN-VFDHALYP--WKFVGEIERTLKPAGVCVLHVALSRRA---D------------KYSANDLFSVKPLVKLFRE 229 (258)
Q Consensus 168 FD~V~s~-~l~h~~~p--~~~l~Ei~RVLKPGG~lii~v~~~~~~---~------------~y~~~~~~s~~~l~~lf~~ 229 (258)
||+|++. +++|+.++ ..++++++|+|||||++++........ . .......++.+++.+++++
T Consensus 249 ~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 328 (352)
T 3mcz_A 249 ADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRD 328 (352)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHH
T ss_pred ccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHH
Confidence 9999995 78888765 688999999999999998874321110 0 0112345789999999999
Q ss_pred CceEEeeeecCCCCeEEEEEEeCC
Q 025071 230 SELVAVRKVDGFGLDTEVVFRKKK 253 (258)
Q Consensus 230 ~~~~~v~~v~g~~l~~~~~f~K~~ 253 (258)
+|+..+... .+..+.++-+|..
T Consensus 329 aGf~~~~~~--~g~~~l~~a~kp~ 350 (352)
T 3mcz_A 329 AGLAVGERS--IGRYTLLIGQRSS 350 (352)
T ss_dssp TTCEEEEEE--ETTEEEEEEECCC
T ss_pred CCCceeeec--cCceEEEEEecCC
Confidence 998877643 2345677777753
No 101
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.50 E-value=4.6e-13 Score=122.95 Aligned_cols=143 Identities=15% Similarity=0.070 Sum_probs=101.2
Q ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCC----------------CCceeeecCCCCCCCCCC
Q 025071 105 QDLKQRHFLFNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGT 167 (258)
Q Consensus 105 ~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~S 167 (258)
+.+++.....++.+|||||||+|..+..+++.. ..+++|+|+ +. ...++.+|+.+.|+++.
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~- 257 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA- 257 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC-
T ss_pred HHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC-
Confidence 344444345677899999999999999988752 347999998 42 13467899998888765
Q ss_pred eeEEEec-cccccCC--hHHHHHHHHhcccCCcEEEEEeccccCc--C--------------cCCCCCCCChhHHHHHhh
Q 025071 168 FDFEFSN-VFDHALY--PWKFVGEIERTLKPAGVCVLHVALSRRA--D--------------KYSANDLFSVKPLVKLFR 228 (258)
Q Consensus 168 FD~V~s~-~l~h~~~--p~~~l~Ei~RVLKPGG~lii~v~~~~~~--~--------------~y~~~~~~s~~~l~~lf~ 228 (258)
|+|++. +++|+.+ ..++++++.|+|||||++++........ . ......+++.+++.++++
T Consensus 258 -D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~ 336 (359)
T 1x19_A 258 -DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILE 336 (359)
T ss_dssp -SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHH
T ss_pred -CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHH
Confidence 999985 7888876 6788999999999999998764321110 0 001122378999999999
Q ss_pred cCceEEeeeecCCCCeEEEEEEe
Q 025071 229 ESELVAVRKVDGFGLDTEVVFRK 251 (258)
Q Consensus 229 ~~~~~~v~~v~g~~l~~~~~f~K 251 (258)
++|+..+....-. ..+.++.+|
T Consensus 337 ~aGf~~v~~~~~~-~~~vi~a~k 358 (359)
T 1x19_A 337 SLGYKDVTMVRKY-DHLLVQAVK 358 (359)
T ss_dssp HHTCEEEEEEEET-TEEEEEEEC
T ss_pred HCCCceEEEEecC-CceEEEEeC
Confidence 9998655544311 345666665
No 102
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.50 E-value=8.4e-14 Score=128.18 Aligned_cols=88 Identities=16% Similarity=0.189 Sum_probs=74.4
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCC---------------CCCceeeecCCCCCCCCCCeeEEEec---
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVP---------------RPPLVIKGDFHAQPFDNGTFDFEFSN--- 174 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~---------------~~~~~~~aDa~~LPf~d~SFD~V~s~--- 174 (258)
+.++.+|||||||+|..+..+++.|..+|+|+|+++ ....++++|++++++++++||+|+++
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMG 141 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCB
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCch
Confidence 457789999999999999999888866899999974 12246889999999999999999985
Q ss_pred -cccccCChHHHHHHHHhcccCCcEEE
Q 025071 175 -VFDHALYPWKFVGEIERTLKPAGVCV 200 (258)
Q Consensus 175 -~l~h~~~p~~~l~Ei~RVLKPGG~li 200 (258)
.+.|..++..++.++.|+|||||+++
T Consensus 142 ~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 35555567789999999999999987
No 103
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.49 E-value=2.4e-13 Score=124.76 Aligned_cols=139 Identities=17% Similarity=0.159 Sum_probs=97.0
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEec
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSN 174 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~ 174 (258)
.+.++.+|||||||+|..+..+++.. ..+++|+|+ +. ...++.+|+.+ +++.+ ||+|++.
T Consensus 179 ~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~-~D~v~~~ 255 (374)
T 1qzz_A 179 DWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPVT-ADVVLLS 255 (374)
T ss_dssp CCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCC-EEEEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCCC-CCEEEEe
Confidence 35567899999999999999888753 347999997 31 23467888765 44443 9999995
Q ss_pred -cccccCChH--HHHHHHHhcccCCcEEEEEec--cccCcC-------------cCCCCCCCChhHHHHHhhcCceEEee
Q 025071 175 -VFDHALYPW--KFVGEIERTLKPAGVCVLHVA--LSRRAD-------------KYSANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 175 -~l~h~~~p~--~~l~Ei~RVLKPGG~lii~v~--~~~~~~-------------~y~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
+++|+.++. .+++++.|+|||||++++... ...... .......++.+++.++++++|+..+.
T Consensus 256 ~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~ 335 (374)
T 1qzz_A 256 FVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALAS 335 (374)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEE
T ss_pred ccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEE
Confidence 788888775 789999999999999988654 211100 00123457899999999999986554
Q ss_pred e--ecCCCCe---EEEEEEeCC
Q 025071 237 K--VDGFGLD---TEVVFRKKK 253 (258)
Q Consensus 237 ~--v~g~~l~---~~~~f~K~~ 253 (258)
. +.+...+ ..++.+|.+
T Consensus 336 ~~~~~~~~~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 336 ERTSGSTTLPFDFSILEFTAVS 357 (374)
T ss_dssp EEEECCSSCSSCEEEEEEEECC
T ss_pred EEECCCCcccCCcEEEEEEECc
Confidence 3 3332211 567777754
No 104
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.49 E-value=6.8e-14 Score=129.10 Aligned_cols=88 Identities=18% Similarity=0.218 Sum_probs=75.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEec----
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSN---- 174 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~---- 174 (258)
.++.+|||||||+|..+..+++.|..+|+|+|+++. ...++++|++++|+++++||+|+++
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGY 144 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBB
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccc
Confidence 467899999999999999999888778999999840 1357899999999999999999995
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEE
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVL 201 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii 201 (258)
.+.+..++..+++++.|+|||||+++.
T Consensus 145 ~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 145 CLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 245556888999999999999999864
No 105
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.49 E-value=1.6e-13 Score=114.06 Aligned_cols=94 Identities=16% Similarity=0.161 Sum_probs=71.2
Q ss_pred cCCCCCCEEEEECCCCCHHHHHHHhc-CC---------CcEEEEeCCCCC----Ccee-eecCCCCC--------CCCCC
Q 025071 111 HFLFNESKALSIGARVGQEVAALKLV-GV---------SDSIGIDLVPRP----PLVI-KGDFHAQP--------FDNGT 167 (258)
Q Consensus 111 ~~l~~~~~VLDIGcGtG~~~~~L~~~-g~---------~~v~GvD~s~~~----~~~~-~aDa~~LP--------f~d~S 167 (258)
..+.++.+|||+|||+|..+..+++. |. .+|+|+|+++.. ..+. .+|+...+ +++++
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (196)
T 2nyu_A 18 QILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRR 97 (196)
T ss_dssp CCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEECSCCTTSHHHHHHHHHHSGGGC
T ss_pred CCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEEEeccCCCHHHHHHHHHhcCCCC
Confidence 45678899999999999999998875 53 579999998743 2456 77776654 45679
Q ss_pred eeEEEec-ccc----ccCCh-------HHHHHHHHhcccCCcEEEEEec
Q 025071 168 FDFEFSN-VFD----HALYP-------WKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 168 FD~V~s~-~l~----h~~~p-------~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
||+|+++ .++ |..++ ..+++++.|+|||||.+++.+.
T Consensus 98 fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 98 ADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 9999985 222 22333 4788999999999999998753
No 106
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.48 E-value=9.5e-14 Score=126.39 Aligned_cols=117 Identities=15% Similarity=0.141 Sum_probs=81.9
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCCCc--------e---eeecCCCCC---CCCCCeeEEEec-ccccc
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRPPL--------V---IKGDFHAQP---FDNGTFDFEFSN-VFDHA 179 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~~~--------~---~~aDa~~LP---f~d~SFD~V~s~-~l~h~ 179 (258)
++.+|||||||||.++..|++.|..+|+|+|+++.+.. + ...++..++ +++.+||+|+++ +|.+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s- 163 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS- 163 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSC-
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhh-
Confidence 56799999999999999998888778999999875431 1 123444444 344579999986 5543
Q ss_pred CChHHHHHHHHhcccCCcEEEEEeccc-cCcC-cC--------CCCCCCChhHHHHHhhcCceEE
Q 025071 180 LYPWKFVGEIERTLKPAGVCVLHVALS-RRAD-KY--------SANDLFSVKPLVKLFRESELVA 234 (258)
Q Consensus 180 ~~p~~~l~Ei~RVLKPGG~lii~v~~~-~~~~-~y--------~~~~~~s~~~l~~lf~~~~~~~ 234 (258)
...++.|++|+|||||.+++++-.. .... .. ...+.+..+++.+++.+.|+.-
T Consensus 164 --l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v 226 (291)
T 3hp7_A 164 --LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSV 226 (291)
T ss_dssp --GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEE
T ss_pred --HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEE
Confidence 4678999999999999998874321 1100 11 0112246688899999999763
No 107
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.48 E-value=4.1e-13 Score=121.86 Aligned_cols=134 Identities=15% Similarity=0.075 Sum_probs=96.4
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEec-c
Q 025071 114 FNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSN-V 175 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~-~ 175 (258)
.+..+|||||||+|..+..+++. +..+++++|+ +. ...+..+|+. .|++. +||+|++. +
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 244 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAV 244 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESC
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehh
Confidence 44679999999999999888764 3347999997 31 2346788886 46666 89999994 8
Q ss_pred ccccCCh--HHHHHHHHhcccCCcEEEEEeccccCcCc----------CCCCCCCChhHHHHHhhcCceEEeeeecCCCC
Q 025071 176 FDHALYP--WKFVGEIERTLKPAGVCVLHVALSRRADK----------YSANDLFSVKPLVKLFRESELVAVRKVDGFGL 243 (258)
Q Consensus 176 l~h~~~p--~~~l~Ei~RVLKPGG~lii~v~~~~~~~~----------y~~~~~~s~~~l~~lf~~~~~~~v~~v~g~~l 243 (258)
++|+.++ .+++++++|+|||||++++.......... ......++.+++.++++++|+..+....-.+
T Consensus 245 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~- 323 (332)
T 3i53_A 245 LHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPISY- 323 (332)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEECSS-
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEECCC-
Confidence 8888876 67899999999999999987542211100 0123457899999999999987766553223
Q ss_pred eEEEEEEe
Q 025071 244 DTEVVFRK 251 (258)
Q Consensus 244 ~~~~~f~K 251 (258)
...+..||
T Consensus 324 ~~vie~r~ 331 (332)
T 3i53_A 324 VSIVEMTA 331 (332)
T ss_dssp SEEEEEEE
T ss_pred cEEEEEee
Confidence 45555554
No 108
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.48 E-value=8.1e-14 Score=120.14 Aligned_cols=137 Identities=17% Similarity=0.172 Sum_probs=88.9
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC-------------CCceeeecCCC---CCCCCCCeeEEEe
Q 025071 112 FLFNESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR-------------PPLVIKGDFHA---QPFDNGTFDFEFS 173 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~-------------~~~~~~aDa~~---LPf~d~SFD~V~s 173 (258)
.+.++.+|||+|||+|..+..|++. | ..+|+|+|+++. ...+.++|+.+ +|+.+++||+|++
T Consensus 74 ~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 74 HIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred cCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 3567889999999999999998875 3 358999999742 23467888887 6777899999999
Q ss_pred ccccccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEee--eecCCCCe-EEEEEE
Q 025071 174 NVFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVR--KVDGFGLD-TEVVFR 250 (258)
Q Consensus 174 ~~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~--~v~g~~l~-~~~~f~ 250 (258)
+.. .......++.++.|+|||||++++.+.............++. ++ .+++.+.|+..+. .++.+.-+ -.++.+
T Consensus 154 ~~~-~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~-~~-~~~l~~~Gf~~~~~~~~~~~~~~~~~v~~~ 230 (233)
T 2ipx_A 154 DVA-QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFA-SE-VKKMQQENMKPQEQLTLEPYERDHAVVVGV 230 (233)
T ss_dssp CCC-CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHH-HH-HHTTGGGTEEEEEEEECTTTSSSEEEEEEE
T ss_pred cCC-CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHH-HH-HHHHHHCCCceEEEEecCCccCCcEEEEEE
Confidence 532 111224457899999999999999754310000001111111 23 5888888876555 34444333 244544
Q ss_pred e
Q 025071 251 K 251 (258)
Q Consensus 251 K 251 (258)
+
T Consensus 231 ~ 231 (233)
T 2ipx_A 231 Y 231 (233)
T ss_dssp E
T ss_pred e
Confidence 4
No 109
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.48 E-value=4.3e-13 Score=123.98 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=90.9
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCC--------CCCceeeecCCCCCCCCCCeeEEEec-cccccCCh
Q 025071 113 LFNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVP--------RPPLVIKGDFHAQPFDNGTFDFEFSN-VFDHALYP 182 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~--------~~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~p 182 (258)
+.++.+|||||||+|..+..+++.+ ...++++|+.. ....++.+|+.+ |+++ ||+|++. +++|+.++
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d~ 283 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWSDE 283 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-CCCC--EEEEEEESSGGGSCHH
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhhcCCCEEEeCCccc-CCCC--CCEEEEecccccCCHH
Confidence 5667899999999999999998754 34688899610 123467889887 7775 9999995 88999888
Q ss_pred H--HHHHHHHhcccCCcEEEEEeccccC--cCc---------------CCCCCCCChhHHHHHhhcCceEEeeee
Q 025071 183 W--KFVGEIERTLKPAGVCVLHVALSRR--ADK---------------YSANDLFSVKPLVKLFRESELVAVRKV 238 (258)
Q Consensus 183 ~--~~l~Ei~RVLKPGG~lii~v~~~~~--~~~---------------y~~~~~~s~~~l~~lf~~~~~~~v~~v 238 (258)
. .++++++|+|||||++++....... ... ......++.+++.++++++|+..+...
T Consensus 284 ~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 358 (372)
T 1fp1_D 284 KCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVA 358 (372)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEE
Confidence 7 8999999999999999887321111 000 011334688999999999997655543
No 110
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.48 E-value=1.2e-13 Score=115.28 Aligned_cols=91 Identities=12% Similarity=0.071 Sum_probs=73.5
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCC--CCCCCeeEEEec-c
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQP--FDNGTFDFEFSN-V 175 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LP--f~d~SFD~V~s~-~ 175 (258)
.++.+|||+|||+|..+..+++.|..+|+|+|+++. ...++++|+.+++ +++++||+|+++ .
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 467899999999999998777777668999998742 2347788887765 558899999997 4
Q ss_pred cccc-CChHHHHHHHHh--cccCCcEEEEEec
Q 025071 176 FDHA-LYPWKFVGEIER--TLKPAGVCVLHVA 204 (258)
Q Consensus 176 l~h~-~~p~~~l~Ei~R--VLKPGG~lii~v~ 204 (258)
+++. .+...+++++.+ +|||||++++..+
T Consensus 123 ~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 123 YNVDSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred CCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 4443 467788999999 9999999999765
No 111
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.48 E-value=1.3e-12 Score=120.86 Aligned_cols=144 Identities=17% Similarity=0.146 Sum_probs=102.5
Q ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCC
Q 025071 105 QDLKQRHFLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGT 167 (258)
Q Consensus 105 ~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~S 167 (258)
..+.+.....++.+|||||||+|..+..+++. +..+++++|+ +. ...++.+|+. .|+++ +
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~ 268 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-G 268 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-S
T ss_pred HHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-C
Confidence 33444444566789999999999999988775 3347999997 31 2346788887 57776 8
Q ss_pred eeEEEec-cccccCChH--HHHHHHHhcccCCcEEEEEeccccCcC------------cCCCCCCCChhHHHHHhhcCce
Q 025071 168 FDFEFSN-VFDHALYPW--KFVGEIERTLKPAGVCVLHVALSRRAD------------KYSANDLFSVKPLVKLFRESEL 232 (258)
Q Consensus 168 FD~V~s~-~l~h~~~p~--~~l~Ei~RVLKPGG~lii~v~~~~~~~------------~y~~~~~~s~~~l~~lf~~~~~ 232 (258)
||+|++. +++|+.++. +++++++|+|||||++++......... .......++.+++.++++++|+
T Consensus 269 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf 348 (369)
T 3gwz_A 269 ADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGL 348 (369)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTE
T ss_pred ceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCC
Confidence 9999994 788887776 689999999999999998743221100 0012334789999999999998
Q ss_pred EEeeeec-CCCCeEEEEEEe
Q 025071 233 VAVRKVD-GFGLDTEVVFRK 251 (258)
Q Consensus 233 ~~v~~v~-g~~l~~~~~f~K 251 (258)
..+.... ..+....+..+|
T Consensus 349 ~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 349 RVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp EEEEEEECSSSSEEEEEEEE
T ss_pred eEEEEEECCCCCcEEEEEEe
Confidence 8777655 334445555544
No 112
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.47 E-value=2.3e-13 Score=111.73 Aligned_cols=91 Identities=15% Similarity=0.134 Sum_probs=72.6
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------------C---CceeeecCCCCCCCCCCeeEEEec
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------------P---PLVIKGDFHAQPFDNGTFDFEFSN 174 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------------~---~~~~~aDa~~LPf~d~SFD~V~s~ 174 (258)
...++.+|||+|||+|..+..+++.+ .+++|+|+++. . ..+..+|+.+ ++++++||+|+++
T Consensus 49 ~~~~~~~vLdiG~G~G~~~~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~ 126 (194)
T 1dus_A 49 VVDKDDDILDLGCGYGVIGIALADEV-KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITN 126 (194)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEEC
T ss_pred ccCCCCeEEEeCCCCCHHHHHHHHcC-CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCCceEEEEC
Confidence 34577899999999999999988774 58999998641 1 4567788776 5668899999996
Q ss_pred -cccc-cCChHHHHHHHHhcccCCcEEEEEec
Q 025071 175 -VFDH-ALYPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 175 -~l~h-~~~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
.++| ..+...+++++.|+|||||.+++..+
T Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 127 PPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp CCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 4454 23567889999999999999999865
No 113
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.47 E-value=6.1e-14 Score=133.01 Aligned_cols=100 Identities=16% Similarity=0.240 Sum_probs=77.0
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCC------CCHHHHHHHh-c-CCCcEEEEeCCCCC------CceeeecCCCCCCC---
Q 025071 102 RFFQDLKQRHFLFNESKALSIGAR------VGQEVAALKL-V-GVSDSIGIDLVPRP------PLVIKGDFHAQPFD--- 164 (258)
Q Consensus 102 ~~~~~L~~~~~l~~~~~VLDIGcG------tG~~~~~L~~-~-g~~~v~GvD~s~~~------~~~~~aDa~~LPf~--- 164 (258)
.+|+.+++. ...++.+||||||| +|..+..+.+ . +..+|+|+|+++.. ..++++|+.++||.
T Consensus 204 ~~Ye~lL~~-l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~~~~rI~fv~GDa~dlpf~~~l 282 (419)
T 3sso_A 204 PHYDRHFRD-YRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHVDELRIRTIQGDQNDAEFLDRI 282 (419)
T ss_dssp HHHHHHHGG-GTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGGCBTTEEEEECCTTCHHHHHHH
T ss_pred HHHHHHHHh-hcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhhcCCCcEEEEecccccchhhhh
Confidence 344444432 23457899999999 6655555543 3 34589999998753 34789999999998
Q ss_pred ---CCCeeEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 165 ---NGTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 165 ---d~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+++||+|+++..++..++..+++|++|+|||||++++.
T Consensus 283 ~~~d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 283 ARRYGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hcccCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEE
Confidence 89999999976666667889999999999999999996
No 114
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.47 E-value=1.6e-13 Score=122.77 Aligned_cols=95 Identities=14% Similarity=0.092 Sum_probs=71.8
Q ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-------C---------Ccee--eecCCCCCCCCCC
Q 025071 106 DLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-------P---------PLVI--KGDFHAQPFDNGT 167 (258)
Q Consensus 106 ~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-------~---------~~~~--~aDa~~LPf~d~S 167 (258)
++.+...+.++.+|||+|||+|.++..+++. ..|+|+|+++. + ..++ ++|+.++| +++
T Consensus 65 ~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~ 140 (265)
T 2oxt_A 65 WMEERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VER 140 (265)
T ss_dssp HHHHHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCC
T ss_pred HHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCC
Confidence 3444455678889999999999999998877 48999998653 1 1346 78888876 789
Q ss_pred eeEEEeccccccCCh----H---HHHHHHHhcccCCc--EEEEEec
Q 025071 168 FDFEFSNVFDHALYP----W---KFVGEIERTLKPAG--VCVLHVA 204 (258)
Q Consensus 168 FD~V~s~~l~h~~~p----~---~~l~Ei~RVLKPGG--~lii~v~ 204 (258)
||+|+|+..++..++ . .+++++.|+||||| .+++.+.
T Consensus 141 fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 141 TDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 999999632333332 1 37899999999999 8888653
No 115
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.47 E-value=1.8e-13 Score=122.64 Aligned_cols=97 Identities=14% Similarity=0.075 Sum_probs=74.8
Q ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCC---------CceeeecCCCCCC-----CCCCeeEE
Q 025071 106 DLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRP---------PLVIKGDFHAQPF-----DNGTFDFE 171 (258)
Q Consensus 106 ~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~---------~~~~~aDa~~LPf-----~d~SFD~V 171 (258)
.+++...+.++.+|||||||+|..+..|++.|. +|+|+|+++.+ ...+.++...++. .+++||+|
T Consensus 36 ~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~V 114 (261)
T 3iv6_A 36 NDIFLENIVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFV 114 (261)
T ss_dssp HHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEE
T ss_pred HHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEE
Confidence 334444567789999999999999999998875 89999997531 1245666666655 26799999
Q ss_pred Eec-cccccC--ChHHHHHHHHhcccCCcEEEEEec
Q 025071 172 FSN-VFDHAL--YPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 172 ~s~-~l~h~~--~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
+++ +++|+. +...+++++.|+| |||++++.+.
T Consensus 115 v~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 115 LNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred EEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 996 788775 3456899999999 9999999864
No 116
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.47 E-value=1.1e-12 Score=120.08 Aligned_cols=139 Identities=16% Similarity=0.135 Sum_probs=96.8
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEec
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSN 174 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~ 174 (258)
.+.++.+|||||||+|..+..+++.+ ...++++|+ +. ...++.+|+.+ ++++ .||+|++.
T Consensus 180 ~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~ 256 (360)
T 1tw3_A 180 DWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILS 256 (360)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEE
T ss_pred CCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEc
Confidence 45667899999999999999888753 347899996 32 23467788765 4544 49999985
Q ss_pred -cccccCChH--HHHHHHHhcccCCcEEEEEecc-ccCcC--c-----------CCCCCCCChhHHHHHhhcCceEEeee
Q 025071 175 -VFDHALYPW--KFVGEIERTLKPAGVCVLHVAL-SRRAD--K-----------YSANDLFSVKPLVKLFRESELVAVRK 237 (258)
Q Consensus 175 -~l~h~~~p~--~~l~Ei~RVLKPGG~lii~v~~-~~~~~--~-----------y~~~~~~s~~~l~~lf~~~~~~~v~~ 237 (258)
+++|+.++. .+++++.|+|||||++++.... ..... . ......++.+++.++++++|+..+..
T Consensus 257 ~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 336 (360)
T 1tw3_A 257 FVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEV 336 (360)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred ccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEE
Confidence 788887764 7899999999999999887543 11110 0 01234568999999999999865543
Q ss_pred --ecCC--CC-eEEEEEEeCC
Q 025071 238 --VDGF--GL-DTEVVFRKKK 253 (258)
Q Consensus 238 --v~g~--~l-~~~~~f~K~~ 253 (258)
+.+. +. ...++.+|++
T Consensus 337 ~~~~~~~~~~~~~~i~~~~~~ 357 (360)
T 1tw3_A 337 RQLPSPTIPYDLSLLVLAPAA 357 (360)
T ss_dssp EEEECSSSSCEEEEEEEEEC-
T ss_pred EeCCCCcccCccEEEEEEeCC
Confidence 3332 12 3567777754
No 117
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.46 E-value=3.1e-13 Score=117.01 Aligned_cols=115 Identities=17% Similarity=0.167 Sum_probs=88.4
Q ss_pred HHHhcCCCCCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCe
Q 025071 107 LKQRHFLFNESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTF 168 (258)
Q Consensus 107 L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SF 168 (258)
+++...+.++.+|||+|||+|..+..+++. | ..+|+|+|+++. ...+..+|+.+.|+++++|
T Consensus 88 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~ 167 (258)
T 2pwy_A 88 MVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAY 167 (258)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCE
T ss_pred HHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCc
Confidence 344445678899999999999999988876 4 358999998641 2346788999988999999
Q ss_pred eEEEeccccccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEee
Q 025071 169 DFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 169 D~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
|+|+++ ..++..+++++.|+|||||++++..+... ...++.+.+++.|+..+.
T Consensus 168 D~v~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~-----------~~~~~~~~l~~~gf~~~~ 220 (258)
T 2pwy_A 168 DGVALD----LMEPWKVLEKAALALKPDRFLVAYLPNIT-----------QVLELVRAAEAHPFRLER 220 (258)
T ss_dssp EEEEEE----SSCGGGGHHHHHHHEEEEEEEEEEESCHH-----------HHHHHHHHHTTTTEEEEE
T ss_pred CEEEEC----CcCHHHHHHHHHHhCCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCCceEE
Confidence 999983 45777899999999999999999875321 245667777777765443
No 118
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.46 E-value=1.6e-13 Score=123.54 Aligned_cols=95 Identities=12% Similarity=0.010 Sum_probs=71.9
Q ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-------C---------Ccee--eecCCCCCCCCC
Q 025071 105 QDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-------P---------PLVI--KGDFHAQPFDNG 166 (258)
Q Consensus 105 ~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-------~---------~~~~--~aDa~~LPf~d~ 166 (258)
.++.+...+.++.+|||+|||+|..+..+++. ..|+|+|+++. + ..++ ++|+.++| ++
T Consensus 72 ~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~ 147 (276)
T 2wa2_A 72 AWIDERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PF 147 (276)
T ss_dssp HHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CC
T ss_pred HHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CC
Confidence 34445555677889999999999999999887 48999998652 1 1356 78888877 78
Q ss_pred CeeEEEeccccccCChH-------HHHHHHHhcccCCc--EEEEEe
Q 025071 167 TFDFEFSNVFDHALYPW-------KFVGEIERTLKPAG--VCVLHV 203 (258)
Q Consensus 167 SFD~V~s~~l~h~~~p~-------~~l~Ei~RVLKPGG--~lii~v 203 (258)
+||+|+|+..++..++. .+++++.|+||||| .+++.+
T Consensus 148 ~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 148 QADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred CcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 99999996323332321 37899999999999 888854
No 119
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.46 E-value=7.1e-13 Score=121.49 Aligned_cols=134 Identities=11% Similarity=0.091 Sum_probs=95.1
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC---------CCceeeecCCCCCCCCCCeeEEEec-cccccCC
Q 025071 113 LFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR---------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHALY 181 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~---------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~ 181 (258)
+.++.+|||||||+|..+..+++. +..+++|+|+ +. ...++.+|+.+ |+++ ||+|++. +++|+.+
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d 261 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGSNNLTYVGGDMFT-SIPN--ADAVLLKYILHNWTD 261 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCBTTEEEEECCTTT-CCCC--CSEEEEESCGGGSCH
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccCCCcEEEeccccC-CCCC--ccEEEeehhhccCCH
Confidence 456789999999999999998864 3347999997 31 13467888866 6663 9999995 8899988
Q ss_pred hH--HHHHHHHhcccC---CcEEEEEeccccCcCc----------C------CCCCCCChhHHHHHhhcCceEEeeeecC
Q 025071 182 PW--KFVGEIERTLKP---AGVCVLHVALSRRADK----------Y------SANDLFSVKPLVKLFRESELVAVRKVDG 240 (258)
Q Consensus 182 p~--~~l~Ei~RVLKP---GG~lii~v~~~~~~~~----------y------~~~~~~s~~~l~~lf~~~~~~~v~~v~g 240 (258)
+. +++++++|+||| ||++++.......... + .....++.+++.++++++|+..+.....
T Consensus 262 ~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~ 341 (352)
T 1fp2_A 262 KDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISPL 341 (352)
T ss_dssp HHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeEEEec
Confidence 87 899999999999 9999887432211000 0 0123367899999999999866554433
Q ss_pred CCCeEEEEEE
Q 025071 241 FGLDTEVVFR 250 (258)
Q Consensus 241 ~~l~~~~~f~ 250 (258)
.+....+..+
T Consensus 342 ~~~~~vie~~ 351 (352)
T 1fp2_A 342 TGFLSLIEIY 351 (352)
T ss_dssp ETTEEEEEEE
T ss_pred CCCcEEEEEe
Confidence 3444444443
No 120
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.46 E-value=6.8e-13 Score=116.52 Aligned_cols=131 Identities=15% Similarity=0.102 Sum_probs=91.1
Q ss_pred CCC-CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCC--CCCCCeeEEE
Q 025071 112 FLF-NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQP--FDNGTFDFEF 172 (258)
Q Consensus 112 ~l~-~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LP--f~d~SFD~V~ 172 (258)
.+. ++.+|||+|||+|..+..+++.+...|+|+|+++. ...++++|+.+++ +++++||+|+
T Consensus 45 ~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 45 YLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp CCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred cCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEE
Confidence 345 68899999999999999998876558999998642 1357788988876 6689999999
Q ss_pred ec-ccc-----ccCC---------------hHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCc
Q 025071 173 SN-VFD-----HALY---------------PWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESE 231 (258)
Q Consensus 173 s~-~l~-----h~~~---------------p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~ 231 (258)
++ -+. +..+ ...+++++.|+|||||++++..+.. ...++...+++.+
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------------~~~~~~~~l~~~~ 192 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPE------------RLLDIIDIMRKYR 192 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTT------------THHHHHHHHHHTT
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHH------------HHHHHHHHHHHCC
Confidence 96 211 1212 2468899999999999999965421 3577888888776
Q ss_pred eE--Eeeeec-CCCCe---EEEEEEeCCc
Q 025071 232 LV--AVRKVD-GFGLD---TEVVFRKKKK 254 (258)
Q Consensus 232 ~~--~v~~v~-g~~l~---~~~~f~K~~~ 254 (258)
+. .+..+. ..+-+ ..+.++|.++
T Consensus 193 ~~~~~~~~v~~~~~~~~~~~l~~~~k~~~ 221 (259)
T 3lpm_A 193 LEPKRIQFVHPRSDREANTVLVEGIKDGK 221 (259)
T ss_dssp EEEEEEEEEESSTTSCCSEEEEEEEETCC
T ss_pred CceEEEEEeecCCCCCcEEEEEEEEeCCC
Confidence 53 444442 11222 3556666543
No 121
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.46 E-value=1.2e-12 Score=109.80 Aligned_cols=122 Identities=16% Similarity=0.100 Sum_probs=86.5
Q ss_pred CCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEeccccc
Q 025071 115 NESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSNVFDH 178 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~~l~h 178 (258)
++.+|||+|||+|..+..++.. +..+++|+|+++. ...+..+|+.+++ ++++||+|+++.+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~-- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAF-- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCS--
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEecc--
Confidence 4789999999999999988864 3458999998642 1346788888876 5689999998654
Q ss_pred cCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEee--eec-CCCCeEEEEEEeC
Q 025071 179 ALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVR--KVD-GFGLDTEVVFRKK 252 (258)
Q Consensus 179 ~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~--~v~-g~~l~~~~~f~K~ 252 (258)
.++..+++++.++|||||++++.... ...+++.+++.+...+.+. .+. ..+..+.++++|+
T Consensus 142 -~~~~~~l~~~~~~L~~gG~l~~~~~~------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 142 -ASLNDMVSWCHHLPGEQGRFYALKGQ------------MPEDEIALLPEEYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp -SSHHHHHHHHTTSEEEEEEEEEEESS------------CCHHHHHTSCTTEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred -CCHHHHHHHHHHhcCCCcEEEEEeCC------------CchHHHHHHhcCCceeeeeeeccCCCCCceEEEEEEec
Confidence 34678999999999999999987531 1346676766633333433 222 2334466777764
No 122
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.45 E-value=3.1e-13 Score=126.02 Aligned_cols=90 Identities=18% Similarity=0.171 Sum_probs=74.1
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEeccc
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSNVF 176 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~~l 176 (258)
...++.+|||||||+|..+..+++.|..+|+|+|+++. ...++++|+++++++ ++||+|+++.+
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~ 138 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWM 138 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCC
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcCh
Confidence 45678899999999999999999888778999999821 134788999999988 89999999643
Q ss_pred cc----cCChHHHHHHHHhcccCCcEEEEE
Q 025071 177 DH----ALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 177 ~h----~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
.| ...+..+++++.|+|||||++++.
T Consensus 139 ~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 139 GYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp BTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 33 345788999999999999998764
No 123
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.45 E-value=3.9e-14 Score=125.14 Aligned_cols=134 Identities=15% Similarity=0.179 Sum_probs=88.0
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCCC-------------CceeeecC---CCCCCCCCCeeEEEe
Q 025071 112 FLFNESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPRP-------------PLVIKGDF---HAQPFDNGTFDFEFS 173 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~~-------------~~~~~aDa---~~LPf~d~SFD~V~s 173 (258)
.+++|.+|||+|||+|..+..+++. | ...|+|+|+++.+ ...+.+|+ +..|+.++++|+|++
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~ 153 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYA 153 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEE
Confidence 4789999999999999999999874 4 2479999987421 12344544 456788899999998
Q ss_pred ccccccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEeee--ecCCCCeEEEE
Q 025071 174 NVFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVRK--VDGFGLDTEVV 248 (258)
Q Consensus 174 ~~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~~--v~g~~l~~~~~ 248 (258)
. +.|..++..++.|+.|+|||||++++.+........-..... ..+..+.+++.|+.-+.. +.++.-+-.++
T Consensus 154 d-~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~--~~~ev~~L~~~GF~l~e~i~L~pf~~~H~lv 227 (233)
T 4df3_A 154 D-VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEV--YKREIKTLMDGGLEIKDVVHLDPFDRDHAMI 227 (233)
T ss_dssp C-CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHH--HHHHHHHHHHTTCCEEEEEECTTTSTTEEEE
T ss_pred e-ccCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHH--HHHHHHHHHHCCCEEEEEEccCCCCCceEEE
Confidence 4 556667888999999999999999886421100000011111 234455566677654444 44554433333
No 124
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.44 E-value=6.2e-13 Score=111.00 Aligned_cols=134 Identities=9% Similarity=0.100 Sum_probs=88.4
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhc--CCCcEEEEeCCCC----------------CCceeeecCCCCC-CCCCCeeEEEe
Q 025071 113 LFNESKALSIGARVGQEVAALKLV--GVSDSIGIDLVPR----------------PPLVIKGDFHAQP-FDNGTFDFEFS 173 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~--g~~~v~GvD~s~~----------------~~~~~~aDa~~LP-f~d~SFD~V~s 173 (258)
+.++.+|||+|||+|..+..+++. +..+|+|+|+++. ...++++|+.+++ +.+++||+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 567889999999999999988775 3348999998742 1347888988887 77899999998
Q ss_pred c-cc-c-----cc---CChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcC---c--eEEeeee
Q 025071 174 N-VF-D-----HA---LYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRES---E--LVAVRKV 238 (258)
Q Consensus 174 ~-~l-~-----h~---~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~---~--~~~v~~v 238 (258)
+ .+ . +. .++..+++++.|+|||||++++....... ........+.+++... + ......+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~v~~~~~~ 173 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGD------TGFEEKEKVLEFLKGVDQKKFIVQRTDFI 173 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTT------TBSHHHHHHHHHHTTSCTTTEEEEEEEET
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCC------CcHHHHHHHHHHHHhCCCCcEEEEEEEec
Confidence 6 22 1 11 13457899999999999999887532100 0011234455665533 2 3344444
Q ss_pred cCCCCe-EEEEEEeC
Q 025071 239 DGFGLD-TEVVFRKK 252 (258)
Q Consensus 239 ~g~~l~-~~~~f~K~ 252 (258)
+....+ ..++-+|.
T Consensus 174 ~~~~~pp~~~~~~~~ 188 (197)
T 3eey_A 174 NQANCPPILVCIEKI 188 (197)
T ss_dssp TCCSCCCEEEEEEEC
T ss_pred cCccCCCeEEEEEEc
Confidence 543333 45555653
No 125
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.44 E-value=5.2e-13 Score=116.88 Aligned_cols=87 Identities=18% Similarity=0.189 Sum_probs=71.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC----------CCceeeecCCCCCCCCCCeeEEEeccccccCCh
Q 025071 114 FNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR----------PPLVIKGDFHAQPFDNGTFDFEFSNVFDHALYP 182 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~----------~~~~~~aDa~~LPf~d~SFD~V~s~~l~h~~~p 182 (258)
.++.+|||||||+|..+..+++. +..+|+|+|+++. ...+..+|++++|+++++||+|++....
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~----- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP----- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh-----
Confidence 46789999999999999998875 2348999999752 2357889999999999999999985221
Q ss_pred HHHHHHHHhcccCCcEEEEEeccc
Q 025071 183 WKFVGEIERTLKPAGVCVLHVALS 206 (258)
Q Consensus 183 ~~~l~Ei~RVLKPGG~lii~v~~~ 206 (258)
.+++|+.|+|||||++++.++..
T Consensus 159 -~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 -CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp -CCHHHHHHHEEEEEEEEEEEECT
T ss_pred -hhHHHHHHhcCCCcEEEEEEcCH
Confidence 24799999999999999987643
No 126
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.44 E-value=3.5e-12 Score=118.11 Aligned_cols=135 Identities=15% Similarity=0.140 Sum_probs=94.9
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCC--------CCCceeeecCCCCCCCCCCeeEEEec-cccccCCh
Q 025071 113 LFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVP--------RPPLVIKGDFHAQPFDNGTFDFEFSN-VFDHALYP 182 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~--------~~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~p 182 (258)
+.+..+|||||||+|..+..+++. +..+++++|+.. ....++.+|+.+ |++++ |+|++. +++|+.++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d~ 275 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFK-EVPSG--DTILMKWILHDWSDQ 275 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-CCCCC--SEEEEESCGGGSCHH
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEEeCCcCC-CCCCC--CEEEehHHhccCCHH
Confidence 556789999999999999988764 334799999721 123578899887 88865 999985 78887654
Q ss_pred --HHHHHHHHhcccCCcEEEEEeccccCc--Cc----------------CCCCCCCChhHHHHHhhcCceEEeeeecCCC
Q 025071 183 --WKFVGEIERTLKPAGVCVLHVALSRRA--DK----------------YSANDLFSVKPLVKLFRESELVAVRKVDGFG 242 (258)
Q Consensus 183 --~~~l~Ei~RVLKPGG~lii~v~~~~~~--~~----------------y~~~~~~s~~~l~~lf~~~~~~~v~~v~g~~ 242 (258)
.+++++++|+|||||++++........ .. ......++.+++.++++++|+..+....-.+
T Consensus 276 ~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~ 355 (364)
T 3p9c_A 276 HCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYIYA 355 (364)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEEEEET
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEEEEcCC
Confidence 468999999999999998874321110 00 0123346889999999999987666543223
Q ss_pred CeEEEEEE
Q 025071 243 LDTEVVFR 250 (258)
Q Consensus 243 l~~~~~f~ 250 (258)
....+.+.
T Consensus 356 ~~~vie~~ 363 (364)
T 3p9c_A 356 NAWAIEFT 363 (364)
T ss_dssp TEEEEEEE
T ss_pred ceEEEEEe
Confidence 33344443
No 127
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.44 E-value=4.2e-13 Score=113.13 Aligned_cols=92 Identities=18% Similarity=0.145 Sum_probs=74.6
Q ss_pred HHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEE
Q 025071 107 LKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFE 171 (258)
Q Consensus 107 L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V 171 (258)
+.+.....++.+|||+|||+|..+..+++.+ .+|+|+|+++. ...+..+|+.+.+.++++||+|
T Consensus 69 ~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i 147 (210)
T 3lbf_A 69 MTELLELTPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAI 147 (210)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEE
T ss_pred HHHhcCCCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEE
Confidence 3333345678999999999999999998875 58999998641 1347788998888888999999
Q ss_pred Eec-cccccCChHHHHHHHHhcccCCcEEEEEecc
Q 025071 172 FSN-VFDHALYPWKFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 172 ~s~-~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
+++ +++|+.+ ++.++|||||++++.++.
T Consensus 148 ~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 148 IVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred EEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 996 7777763 789999999999998764
No 128
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.44 E-value=1.9e-13 Score=112.54 Aligned_cols=115 Identities=16% Similarity=0.146 Sum_probs=81.7
Q ss_pred CCCCCCEEEEECCCCCHH--HHH-H--HhcCCCcEEEEeCCCCCCceeeecCCCCCC---CCCCeeEEEec-ccccc-CC
Q 025071 112 FLFNESKALSIGARVGQE--VAA-L--KLVGVSDSIGIDLVPRPPLVIKGDFHAQPF---DNGTFDFEFSN-VFDHA-LY 181 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~--~~~-L--~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf---~d~SFD~V~s~-~l~h~-~~ 181 (258)
.+.++.+|||||||+... ... + ++.... ....+.++|++++|+ ++++||+|+++ +++|+ .+
T Consensus 9 g~~~g~~vL~~~~g~v~vD~s~~ml~~a~~~~~---------~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~ 79 (176)
T 2ld4_A 9 GISAGQFVAVVWDKSSPVEALKGLVDKLQALTG---------NEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLH 79 (176)
T ss_dssp TCCTTSEEEEEECTTSCHHHHHHHHHHHHHHTT---------TTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCC
T ss_pred CCCCCCEEEEecCCceeeeCCHHHHHHHHHhcc---------cCcEEEEechhcCccccCCCCCEeEEEECChhhhcccC
Confidence 367889999999997541 111 1 111010 124578899999998 89999999995 88998 89
Q ss_pred hHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEeee
Q 025071 182 PWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVRK 237 (258)
Q Consensus 182 p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~~ 237 (258)
+..+++|++|+|||||++++..+..... ......++.+++.++++++|++.+..
T Consensus 80 ~~~~l~~~~r~LkpgG~l~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aGfi~~~~ 133 (176)
T 2ld4_A 80 SAEILAEIARILRPGGCLFLKEPVETAV--DNNSKVKTASKLCSALTLSGLVEVKE 133 (176)
T ss_dssp CHHHHHHHHHHEEEEEEEEEEEEEESSS--CSSSSSCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEEccccccc--ccccccCCHHHHHHHHHHCCCcEeec
Confidence 9999999999999999999964432110 01112247889999999999855444
No 129
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.44 E-value=1.9e-12 Score=131.77 Aligned_cols=90 Identities=16% Similarity=0.213 Sum_probs=76.4
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCC--CcEEEEeCCCC---------------------CCceeeecCCCCCCCCCCeeEE
Q 025071 115 NESKALSIGARVGQEVAALKLVGV--SDSIGIDLVPR---------------------PPLVIKGDFHAQPFDNGTFDFE 171 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~--~~v~GvD~s~~---------------------~~~~~~aDa~~LPf~d~SFD~V 171 (258)
++.+|||||||+|..+..|++.+. .+|+|+|+++. ...++++|+.++|+++++||+|
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlV 800 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIG 800 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEE
Confidence 678999999999999999998762 58999998641 1247889999999999999999
Q ss_pred Eec-cccccCChH--HHHHHHHhcccCCcEEEEEecc
Q 025071 172 FSN-VFDHALYPW--KFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 172 ~s~-~l~h~~~p~--~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
++. +++|+.++. .+++|+.|+|||| .+++.++.
T Consensus 801 V~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 801 TCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred EEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 995 899998776 4889999999999 77777654
No 130
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.43 E-value=4.4e-13 Score=122.56 Aligned_cols=87 Identities=15% Similarity=0.174 Sum_probs=73.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEec----
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSN---- 174 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~---- 174 (258)
.++.+|||||||+|..+..+++.|..+|+|+|+++. ...++.+|++++++++++||+|+++
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY 116 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchh
Confidence 367899999999999999998888668999999731 1246889999999999999999985
Q ss_pred cccccCChHHHHHHHHhcccCCcEEE
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCV 200 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~li 200 (258)
.+.+...+..++.++.|+|||||+++
T Consensus 117 ~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 117 FLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 34455678889999999999999987
No 131
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.43 E-value=1.3e-12 Score=111.48 Aligned_cols=104 Identities=16% Similarity=0.029 Sum_probs=78.8
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEecc
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSNV 175 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~~ 175 (258)
.+.++.+|||+|||+|..+..+++.+ .+|+|+|+++. ...++++|+.+.....++||+|+++.
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 130 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLAG-GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGG 130 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECS
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECC
Confidence 45678899999999999999998875 48999998642 23467888887433446899999853
Q ss_pred ccccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCc
Q 025071 176 FDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESE 231 (258)
Q Consensus 176 l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~ 231 (258)
..++. +++++.|+|||||++++..... .+..++.+++++.|
T Consensus 131 ---~~~~~-~l~~~~~~LkpgG~lv~~~~~~-----------~~~~~~~~~l~~~g 171 (204)
T 3njr_A 131 ---GGSQA-LYDRLWEWLAPGTRIVANAVTL-----------ESETLLTQLHARHG 171 (204)
T ss_dssp ---CCCHH-HHHHHHHHSCTTCEEEEEECSH-----------HHHHHHHHHHHHHC
T ss_pred ---cccHH-HHHHHHHhcCCCcEEEEEecCc-----------ccHHHHHHHHHhCC
Confidence 12566 8999999999999999875421 13566777777665
No 132
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.43 E-value=7e-13 Score=112.81 Aligned_cols=109 Identities=17% Similarity=0.152 Sum_probs=80.3
Q ss_pred CCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCC---------------CCceeeecCCCCC--CCCCCeeEEEeccc
Q 025071 115 NESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPR---------------PPLVIKGDFHAQP--FDNGTFDFEFSNVF 176 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~---------------~~~~~~aDa~~LP--f~d~SFD~V~s~~l 176 (258)
++.+|||||||+|..+..+++.. ..+++|+|+++. ...++++|+..++ +++++||+|+++.-
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 57799999999999999888753 358999998742 2347889999988 88999999998622
Q ss_pred cccC---------ChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEE
Q 025071 177 DHAL---------YPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVA 234 (258)
Q Consensus 177 ~h~~---------~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~ 234 (258)
.++. ....+++++.|+|||||.+++..... . ..+.+.+.+.+.|+..
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----~-------~~~~~~~~~~~~g~~~ 176 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR----G-------LFEYSLVSFSQYGMKL 176 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH----H-------HHHHHHHHHHHHTCEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH----H-------HHHHHHHHHHHCCCee
Confidence 2111 12578999999999999998865321 0 1256667777766543
No 133
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.43 E-value=5.4e-13 Score=117.77 Aligned_cols=130 Identities=13% Similarity=0.048 Sum_probs=89.9
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC---------------CCceeeecCCCCCCC---CCCeeEEEec
Q 025071 114 FNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR---------------PPLVIKGDFHAQPFD---NGTFDFEFSN 174 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~---d~SFD~V~s~ 174 (258)
.++.+|||||||+|..+..|+.. +..+|+|+|+++. ...++++|+++++.. +++||+|++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 46789999999999999888864 4458999998742 135788899888864 4899999996
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceE--EeeeecCCCC--e-EEEEE
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELV--AVRKVDGFGL--D-TEVVF 249 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~--~v~~v~g~~l--~-~~~~f 249 (258)
++. +...+++++.|+|||||++++..... .. ....++...++..|+. ++..+.-.+. . ..+++
T Consensus 159 a~~---~~~~ll~~~~~~LkpgG~l~~~~g~~------~~---~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~ 226 (249)
T 3g89_A 159 AVA---PLCVLSELLLPFLEVGGAAVAMKGPR------VE---EELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVL 226 (249)
T ss_dssp SSC---CHHHHHHHHGGGEEEEEEEEEEECSC------CH---HHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEE
T ss_pred CcC---CHHHHHHHHHHHcCCCeEEEEEeCCC------cH---HHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEE
Confidence 543 45788899999999999988864311 00 0234455666666653 4444432222 2 47778
Q ss_pred EeCCcC
Q 025071 250 RKKKKK 255 (258)
Q Consensus 250 ~K~~~~ 255 (258)
+|..++
T Consensus 227 ~k~~~t 232 (249)
T 3g89_A 227 EKTAPT 232 (249)
T ss_dssp EECSCC
T ss_pred EeCCCC
Confidence 885544
No 134
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.42 E-value=1.3e-12 Score=111.80 Aligned_cols=135 Identities=19% Similarity=0.206 Sum_probs=84.9
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC-------------CCceeeecCCCCC---CCCCCeeEEEec
Q 025071 113 LFNESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR-------------PPLVIKGDFHAQP---FDNGTFDFEFSN 174 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~-------------~~~~~~aDa~~LP---f~d~SFD~V~s~ 174 (258)
+.++.+|||+|||+|..+..+++. | ...|+|+|+++. ...+.++|+...+ ..+++||+|+++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 557889999999999999998864 4 258999998751 2346788887632 124689999986
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEeeee--cCCCCe-EEEEEEe
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVRKV--DGFGLD-TEVVFRK 251 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~~v--~g~~l~-~~~~f~K 251 (258)
.. +...+..+++++.|+|||||++++.+.......... ...+..+++..+ .+. +..+... ..+.-+ -.++++|
T Consensus 151 ~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-~~~~~~~~l~~l-~~~-f~~~~~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 151 VA-QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKE-PEQVFREVEREL-SEY-FEVIERLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp CC-STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSC-HHHHHHHHHHHH-HTT-SEEEEEEECTTTSSSEEEEEEEC
T ss_pred CC-CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCC-hhhhhHHHHHHH-Hhh-ceeeeEeccCcccCCCEEEEEEe
Confidence 33 222223458999999999999988753211100001 112234567776 444 5444433 333222 3667766
No 135
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.42 E-value=4.8e-13 Score=109.59 Aligned_cols=105 Identities=16% Similarity=0.145 Sum_probs=79.5
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCCCCC-CCeeEEEec
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDN-GTFDFEFSN 174 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d-~SFD~V~s~ 174 (258)
.+.++.+|||+|||+|..+..+++.+ .+++|+|+++. ...+..+|+.+ ++++ ++||+|+++
T Consensus 30 ~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~ 107 (192)
T 1l3i_A 30 EPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVG 107 (192)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEES
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEEC
Confidence 45678899999999999999998877 68999998641 22356677665 4444 689999986
Q ss_pred -cccccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCce
Q 025071 175 -VFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESEL 232 (258)
Q Consensus 175 -~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~ 232 (258)
.++ +...+++++.++|||||.+++...... +..++.+++++.|+
T Consensus 108 ~~~~---~~~~~l~~~~~~l~~gG~l~~~~~~~~-----------~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 108 GSGG---ELQEILRIIKDKLKPGGRIIVTAILLE-----------TKFEAMECLRDLGF 152 (192)
T ss_dssp CCTT---CHHHHHHHHHHTEEEEEEEEEEECBHH-----------HHHHHHHHHHHTTC
T ss_pred CchH---HHHHHHHHHHHhcCCCcEEEEEecCcc-----------hHHHHHHHHHHCCC
Confidence 344 457889999999999999988754211 24667778887765
No 136
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.42 E-value=5.3e-13 Score=114.09 Aligned_cols=94 Identities=17% Similarity=0.171 Sum_probs=73.4
Q ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-------------CCceeeecCCCCCCCCCCeeEE
Q 025071 105 QDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-------------PPLVIKGDFHAQPFDNGTFDFE 171 (258)
Q Consensus 105 ~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-------------~~~~~~aDa~~LPf~d~SFD~V 171 (258)
+.+++...+.++.+|||||||+|..+..+++.+ .+|+|+|+++. ...+..+|+.+....+++||+|
T Consensus 60 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 138 (231)
T 1vbf_A 60 IFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRV 138 (231)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEE
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEE
Confidence 334443345678899999999999999998877 58999998642 2346778887743357899999
Q ss_pred Eec-cccccCChHHHHHHHHhcccCCcEEEEEecc
Q 025071 172 FSN-VFDHALYPWKFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 172 ~s~-~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
+++ .++|+. .++.|+|||||++++.++.
T Consensus 139 ~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 139 VVWATAPTLL------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp EESSBBSSCC------HHHHHTEEEEEEEEEEECS
T ss_pred EECCcHHHHH------HHHHHHcCCCcEEEEEEcC
Confidence 996 677765 4899999999999998764
No 137
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.41 E-value=6.9e-13 Score=117.64 Aligned_cols=110 Identities=15% Similarity=0.166 Sum_probs=84.9
Q ss_pred cCCCCCCEEEEECCCCCHHHHHHHhc--CCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEE
Q 025071 111 HFLFNESKALSIGARVGQEVAALKLV--GVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEF 172 (258)
Q Consensus 111 ~~l~~~~~VLDIGcGtG~~~~~L~~~--g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~ 172 (258)
..+.++.+|||+|||+|..+..+++. +..+|+|+|+++. ...+.++|+.+ ++++++||+|+
T Consensus 106 ~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi 184 (275)
T 1yb2_A 106 CGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVI 184 (275)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEE
T ss_pred cCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEE
Confidence 34567889999999999999988875 2358999998631 13467788877 78889999999
Q ss_pred eccccccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEee
Q 025071 173 SNVFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 173 s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
+ |.+++..+++++.|+|||||++++..+... ..+++.+.+++.|+..+.
T Consensus 185 ~----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~-----------~~~~~~~~l~~~Gf~~~~ 233 (275)
T 1yb2_A 185 A----DIPDPWNHVQKIASMMKPGSVATFYLPNFD-----------QSEKTVLSLSASGMHHLE 233 (275)
T ss_dssp E----CCSCGGGSHHHHHHTEEEEEEEEEEESSHH-----------HHHHHHHHSGGGTEEEEE
T ss_pred E----cCcCHHHHHHHHHHHcCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCCeEEE
Confidence 8 456788899999999999999999765310 246677778777765443
No 138
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.41 E-value=7.8e-13 Score=107.90 Aligned_cols=105 Identities=11% Similarity=-0.012 Sum_probs=75.1
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC--------------C-CceeeecCC-CCCCCCCCeeEEEec
Q 025071 112 FLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR--------------P-PLVIKGDFH-AQPFDNGTFDFEFSN 174 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~--------------~-~~~~~aDa~-~LPf~d~SFD~V~s~ 174 (258)
...++.+|||+|||+|..+..+++. +..+|+|+|+++. . ..++.+|+. .+|..+++||+|+++
T Consensus 22 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 22 APKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEEC
T ss_pred cccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEEC
Confidence 4567789999999999999998875 3458999998741 1 125566663 344444899999996
Q ss_pred -cccccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCc
Q 025071 175 -VFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESE 231 (258)
Q Consensus 175 -~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~ 231 (258)
.++| ..+++++.|+|||||++++..... .+...+.+++++.+
T Consensus 102 ~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~-----------~~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 102 GGLTA----PGVFAAAWKRLPVGGRLVANAVTV-----------ESEQMLWALRKQFG 144 (178)
T ss_dssp C-TTC----TTHHHHHHHTCCTTCEEEEEECSH-----------HHHHHHHHHHHHHC
T ss_pred CcccH----HHHHHHHHHhcCCCCEEEEEeecc-----------ccHHHHHHHHHHcC
Confidence 5555 568899999999999999875421 12355666666554
No 139
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.41 E-value=1.5e-12 Score=106.02 Aligned_cols=103 Identities=14% Similarity=0.144 Sum_probs=81.1
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEeccc
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSNVF 176 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~~l 176 (258)
...++.+|||+|||+|..+..+++ +..+++|+|+++. ...+.++|+.+ ++++++||+|+++..
T Consensus 32 ~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 32 NLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT 109 (183)
T ss_dssp CCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc
Confidence 355778999999999999999988 4468999998642 23467788877 888899999999643
Q ss_pred cccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCce
Q 025071 177 DHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESEL 232 (258)
Q Consensus 177 ~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~ 232 (258)
.++..+++++.|+ |||.+++...... +..++.+++++.|+
T Consensus 110 ---~~~~~~l~~~~~~--~gG~l~~~~~~~~-----------~~~~~~~~l~~~g~ 149 (183)
T 2yxd_A 110 ---KNIEKIIEILDKK--KINHIVANTIVLE-----------NAAKIINEFESRGY 149 (183)
T ss_dssp ---SCHHHHHHHHHHT--TCCEEEEEESCHH-----------HHHHHHHHHHHTTC
T ss_pred ---ccHHHHHHHHhhC--CCCEEEEEecccc-----------cHHHHHHHHHHcCC
Confidence 5788999999999 9999999764211 25678888888873
No 140
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.41 E-value=2.4e-12 Score=114.08 Aligned_cols=125 Identities=15% Similarity=0.145 Sum_probs=90.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHh-cCCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEec---
Q 025071 114 FNESKALSIGARVGQEVAALKL-VGVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSN--- 174 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~-~g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~--- 174 (258)
.++.+|||+|||+|..+..+++ .+..+|+|+|+++. ...++++|+.+ ++++++||+|+++
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~-~~~~~~fD~Iv~npPy 186 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS-ALAGQQFAMIVSNPPY 186 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG-GGTTCCEEEEEECCCC
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhh-hcccCCccEEEECCCC
Confidence 4677999999999999998885 34458999998742 13467788766 4557899999996
Q ss_pred -----------ccccc------------CChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCc
Q 025071 175 -----------VFDHA------------LYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESE 231 (258)
Q Consensus 175 -----------~l~h~------------~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~ 231 (258)
+++|. .+...+++++.++|||||++++..+. ...+++.+++++.|
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~------------~~~~~~~~~l~~~G 254 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW------------QQGEAVRQAFILAG 254 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS------------SCHHHHHHHHHHTT
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc------------hHHHHHHHHHHHCC
Confidence 11121 12356789999999999999986431 24678999999888
Q ss_pred eEEeeee-cCCCCeEEEEEEe
Q 025071 232 LVAVRKV-DGFGLDTEVVFRK 251 (258)
Q Consensus 232 ~~~v~~v-~g~~l~~~~~f~K 251 (258)
+..+... +-.|.++.++.+|
T Consensus 255 f~~v~~~~d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 255 YHDVETCRDYGDNERVTLGRY 275 (276)
T ss_dssp CTTCCEEECTTSSEEEEEEEC
T ss_pred CcEEEEEecCCCCCcEEEEEE
Confidence 7544433 5667777666553
No 141
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.41 E-value=1.1e-12 Score=115.49 Aligned_cols=123 Identities=18% Similarity=0.288 Sum_probs=88.4
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCC--------------CceeeecCCCCCCCCCCeeEEEeccccc
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRP--------------PLVIKGDFHAQPFDNGTFDFEFSNVFDH 178 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~--------------~~~~~aDa~~LPf~d~SFD~V~s~~l~h 178 (258)
+.++.+|||+|||+|..+..+++.|. +|+|+|+++.. ..+..+|+.. ++++++||+|+++.+.|
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLYAE 195 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH-HGGGCCEEEEEEECCHH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh-cCcCCCCCEEEECCcHH
Confidence 46788999999999999999988886 89999997531 2355666654 35678999999974333
Q ss_pred cCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEeeeecCCCCeEEEEEEe
Q 025071 179 ALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVRKVDGFGLDTEVVFRK 251 (258)
Q Consensus 179 ~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~~v~g~~l~~~~~f~K 251 (258)
. ...+++++.|+|||||++++..... .+.+++.+++++.|+..+......+- ..++++|
T Consensus 196 ~--~~~~l~~~~~~LkpgG~lils~~~~-----------~~~~~v~~~l~~~Gf~~~~~~~~~~W-~~l~~~k 254 (254)
T 2nxc_A 196 L--HAALAPRYREALVPGGRALLTGILK-----------DRAPLVREAMAGAGFRPLEEAAEGEW-VLLAYGR 254 (254)
T ss_dssp H--HHHHHHHHHHHEEEEEEEEEEEEEG-----------GGHHHHHHHHHHTTCEEEEEEEETTE-EEEEEEC
T ss_pred H--HHHHHHHHHHHcCCCCEEEEEeecc-----------CCHHHHHHHHHHCCCEEEEEeccCCe-EEEEEEC
Confidence 2 3578899999999999999863211 13688999999888765444322222 3455554
No 142
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.41 E-value=4.8e-13 Score=123.24 Aligned_cols=89 Identities=16% Similarity=0.145 Sum_probs=72.2
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCC---------------CCCceeeecCCCCCCCCCCeeEEEec-cc
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVP---------------RPPLVIKGDFHAQPFDNGTFDFEFSN-VF 176 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~---------------~~~~~~~aDa~~LPf~d~SFD~V~s~-~l 176 (258)
..++.+|||||||+|..+..+++.|..+|+|+|+++ ....++.+|+++++++ ++||+|++. .+
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~ 126 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMG 126 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCB
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCch
Confidence 457789999999999999999888777899999974 1134678899998876 589999996 55
Q ss_pred cccCC--hHHHHHHHHhcccCCcEEEEE
Q 025071 177 DHALY--PWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 177 ~h~~~--p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+|+.. ....+.++.|+|||||++++.
T Consensus 127 ~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 127 YMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred hcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 66543 356788999999999999864
No 143
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.40 E-value=1.6e-12 Score=110.19 Aligned_cols=93 Identities=17% Similarity=0.134 Sum_probs=70.4
Q ss_pred cCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCC----CceeeecCCCCCCC-----------CCCeeEEEecc
Q 025071 111 HFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRP----PLVIKGDFHAQPFD-----------NGTFDFEFSNV 175 (258)
Q Consensus 111 ~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~----~~~~~aDa~~LPf~-----------d~SFD~V~s~~ 175 (258)
..+.++.+|||+|||+|..+..+++.+ ..|+|+|+++.. ..++++|+.+.+.. .++||+|+|+.
T Consensus 21 ~~~~~g~~VLDlG~G~G~~s~~la~~~-~~V~gvD~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~ 99 (191)
T 3dou_A 21 RVVRKGDAVIEIGSSPGGWTQVLNSLA-RKIISIDLQEMEEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDA 99 (191)
T ss_dssp CCSCTTCEEEEESCTTCHHHHHHTTTC-SEEEEEESSCCCCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECC
T ss_pred CCCCCCCEEEEEeecCCHHHHHHHHcC-CcEEEEeccccccCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCC
Confidence 345788999999999999999998874 589999998742 35788999887632 14999999952
Q ss_pred -cc----ccCC-------hHHHHHHHHhcccCCcEEEEEec
Q 025071 176 -FD----HALY-------PWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 176 -l~----h~~~-------p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
.. +..+ ...+++++.|+|||||.+++.+.
T Consensus 100 ~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 100 MAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 11 1111 24678999999999999998653
No 144
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.39 E-value=4.7e-13 Score=120.55 Aligned_cols=88 Identities=19% Similarity=0.175 Sum_probs=66.7
Q ss_pred CCCEEEEECCCCCH----HHHHHHhc-C----CCcEEEEeCCCC------------------------------------
Q 025071 115 NESKALSIGARVGQ----EVAALKLV-G----VSDSIGIDLVPR------------------------------------ 149 (258)
Q Consensus 115 ~~~~VLDIGcGtG~----~~~~L~~~-g----~~~v~GvD~s~~------------------------------------ 149 (258)
++.+|||+|||||. ++..|++. | ..+|+|+|+++.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 44455553 3 137999998631
Q ss_pred ----------CCceeeecCCCCCCC-CCCeeEEEe-ccccccCCh--HHHHHHHHhcccCCcEEEEE
Q 025071 150 ----------PPLVIKGDFHAQPFD-NGTFDFEFS-NVFDHALYP--WKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 150 ----------~~~~~~aDa~~LPf~-d~SFD~V~s-~~l~h~~~p--~~~l~Ei~RVLKPGG~lii~ 202 (258)
...+.++|..+.||+ +++||+|+| +++.|+.++ .+++++++++|||||++++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 012456777777776 689999999 578887655 57899999999999999884
No 145
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.39 E-value=1.3e-12 Score=113.53 Aligned_cols=115 Identities=17% Similarity=0.168 Sum_probs=86.7
Q ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC--------------C--CceeeecCCCCCCCCCCee
Q 025071 108 KQRHFLFNESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR--------------P--PLVIKGDFHAQPFDNGTFD 169 (258)
Q Consensus 108 ~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~--------------~--~~~~~aDa~~LPf~d~SFD 169 (258)
.....+.++.+|||+|||+|..+..+++. + ..+|+|+|+++. . ..+..+|+.+ ++++++||
T Consensus 86 ~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~D 164 (255)
T 3mb5_A 86 VAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE-GIEEENVD 164 (255)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG-CCCCCSEE
T ss_pred HHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh-ccCCCCcC
Confidence 33345678899999999999999998876 4 458999998741 1 3467788875 48889999
Q ss_pred EEEeccccccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCc--eEEeeee
Q 025071 170 FEFSNVFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESE--LVAVRKV 238 (258)
Q Consensus 170 ~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~--~~~v~~v 238 (258)
+|+++ ..++..+++++.|+|||||++++..+... ...++.+++++.| +..+..+
T Consensus 165 ~v~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~-----------~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 165 HVILD----LPQPERVVEHAAKALKPGGFFVAYTPCSN-----------QVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp EEEEC----SSCGGGGHHHHHHHEEEEEEEEEEESSHH-----------HHHHHHHHHHHTGGGBSCCEEE
T ss_pred EEEEC----CCCHHHHHHHHHHHcCCCCEEEEEECCHH-----------HHHHHHHHHHHcCCCccccEEE
Confidence 99984 45778899999999999999998765321 2466777777777 6544443
No 146
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.39 E-value=1.1e-12 Score=123.15 Aligned_cols=109 Identities=20% Similarity=0.243 Sum_probs=84.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------------CCceeeecCCCCCCCCCCeeEEEec-cccc
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDH 178 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h 178 (258)
.++.+|||+|||+|..+..+++.|. +|+|+|+++. ...++++|+.+.++++++||+|+++ .++|
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 3678999999999999999998875 8999998642 2457889999999888999999997 5555
Q ss_pred -----cCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceE
Q 025071 179 -----ALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELV 233 (258)
Q Consensus 179 -----~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~ 233 (258)
..+...+++++.|+|||||.+++..... ..-...+.+.|.++..+
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~----------l~~~~~l~~~f~~v~~l 360 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF----------LKYEPLLEEKFGAFQTL 360 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT----------SCHHHHHHHHHSCCEEE
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC----------CChHHHHHHhhccEEEE
Confidence 3356788999999999999999976421 10134566777766554
No 147
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.39 E-value=6.6e-13 Score=115.39 Aligned_cols=120 Identities=13% Similarity=0.101 Sum_probs=76.1
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC-C------------------CceeeecCCCCCCC-CCCeeEEE
Q 025071 114 FNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR-P------------------PLVIKGDFHAQPFD-NGTFDFEF 172 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~-~------------------~~~~~aDa~~LPf~-d~SFD~V~ 172 (258)
.++.+|||||||+|..+..|++. ....|+|+|+++. . ..++++|++.+|.. ++.+|.|.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 46789999999999999998853 3357999999831 1 13678899998743 25666666
Q ss_pred ec-cc----cc-cCChHHHHHHHHhcccCCcEEEEEeccccCcC--c--CCCCCCCCh-----hHHHHHhhcCceE
Q 025071 173 SN-VF----DH-ALYPWKFVGEIERTLKPAGVCVLHVALSRRAD--K--YSANDLFSV-----KPLVKLFRESELV 233 (258)
Q Consensus 173 s~-~l----~h-~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~--~--y~~~~~~s~-----~~l~~lf~~~~~~ 233 (258)
++ .. .| ..++..+++|++|+|||||++++......... . ......++. +++.+++.+.|+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~ 178 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFR 178 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCC
Confidence 53 11 11 22446789999999999999988433221111 0 000011122 2488888888764
No 148
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.38 E-value=8.2e-13 Score=113.23 Aligned_cols=90 Identities=17% Similarity=0.210 Sum_probs=69.7
Q ss_pred CCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC---------------CCceeeecCCCCC--CCCCCeeEEEeccc
Q 025071 115 NESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR---------------PPLVIKGDFHAQP--FDNGTFDFEFSNVF 176 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~---------------~~~~~~aDa~~LP--f~d~SFD~V~s~~l 176 (258)
++.+|||||||+|..+..|++. +..+++|+|+++. ...++++|+..++ |++++||.|+++.-
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 5679999999999999999875 3358999998742 1346788998887 88999999987421
Q ss_pred cccC---------ChHHHHHHHHhcccCCcEEEEEec
Q 025071 177 DHAL---------YPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 177 ~h~~---------~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
+.+. ....+++++.|+|||||.+++.+.
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 1111 135789999999999999998763
No 149
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.38 E-value=2e-13 Score=112.15 Aligned_cols=92 Identities=15% Similarity=0.099 Sum_probs=69.9
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCC-CCCCCCCeeEEEecc
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHA-QPFDNGTFDFEFSNV 175 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~-LPf~d~SFD~V~s~~ 175 (258)
..++.+|||+|||+|..+..+++.|..+|+|+|+++. ...++.+|+.+ ++..+++||+|+++.
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 4567899999999999999888877668999998742 12466778776 566667899999963
Q ss_pred ccccCChHHHHHHHH--hcccCCcEEEEEec
Q 025071 176 FDHALYPWKFVGEIE--RTLKPAGVCVLHVA 204 (258)
Q Consensus 176 l~h~~~p~~~l~Ei~--RVLKPGG~lii~v~ 204 (258)
..+.......++++. |+|||||++++...
T Consensus 109 ~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 109 PYAKETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp SSHHHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCCcchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 222233456677776 99999999999765
No 150
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.38 E-value=5e-13 Score=109.90 Aligned_cols=92 Identities=17% Similarity=0.032 Sum_probs=70.6
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCC----CCCCCCCeeEEEe
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHA----QPFDNGTFDFEFS 173 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~----LPf~d~SFD~V~s 173 (258)
.++.+|||+|||+|..+..+++.+..+|+|+|+++. ...++++|+.+ +|+++++||+|++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 467899999999999998887777668999998742 12467777765 3345789999999
Q ss_pred ccccccCChHHHHHHH--HhcccCCcEEEEEecc
Q 025071 174 NVFDHALYPWKFVGEI--ERTLKPAGVCVLHVAL 205 (258)
Q Consensus 174 ~~l~h~~~p~~~l~Ei--~RVLKPGG~lii~v~~ 205 (258)
+...+.......++++ .|+|||||++++..+.
T Consensus 123 ~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 123 DPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp CCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 7333344567777888 9999999999987653
No 151
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.38 E-value=3.7e-12 Score=112.18 Aligned_cols=136 Identities=15% Similarity=0.185 Sum_probs=84.9
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC-------------CCceeeecCCCCC---CCCCCeeEEEe
Q 025071 112 FLFNESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR-------------PPLVIKGDFHAQP---FDNGTFDFEFS 173 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~-------------~~~~~~aDa~~LP---f~d~SFD~V~s 173 (258)
.+.++.+|||+|||+|..+..+++. | ...|+|+|+++. ...++++|+...+ ...++||+|++
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~ 152 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYV 152 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEe
Confidence 3678999999999999999888764 3 347999999863 1235678887543 12579999999
Q ss_pred ccccccCChHHHH-HHHHhcccCCcEEEEEecc-ccCcCcCCCCCCCChhHHHHHhhcCceEEeeeec--CCCCe-EEEE
Q 025071 174 NVFDHALYPWKFV-GEIERTLKPAGVCVLHVAL-SRRADKYSANDLFSVKPLVKLFRESELVAVRKVD--GFGLD-TEVV 248 (258)
Q Consensus 174 ~~l~h~~~p~~~l-~Ei~RVLKPGG~lii~v~~-~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~~v~--g~~l~-~~~~ 248 (258)
+.- + ++....+ ..+.|+|||||++++.+.. +.. ........ .++..+.+++.|+.-+..++ .+.-+ -.++
T Consensus 153 d~a-~-~~~~~il~~~~~~~LkpGG~lvisik~~~~d-~t~~~~e~--~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~ 227 (232)
T 3id6_C 153 DIA-Q-PDQTDIAIYNAKFFLKVNGDMLLVIKARSID-VTKDPKEI--YKTEVEKLENSNFETIQIINLDPYDKDHAIVL 227 (232)
T ss_dssp CCC-C-TTHHHHHHHHHHHHEEEEEEEEEEEC--------CCSSSS--TTHHHHHHHHTTEEEEEEEECTTTCSSCEEEE
T ss_pred cCC-C-hhHHHHHHHHHHHhCCCCeEEEEEEccCCcc-cCCCHHHH--HHHHHHHHHHCCCEEEEEeccCCCcCceEEEE
Confidence 632 2 3444444 5666699999999987532 110 01111222 24555666667765555543 33333 4566
Q ss_pred EEeC
Q 025071 249 FRKK 252 (258)
Q Consensus 249 f~K~ 252 (258)
.+|+
T Consensus 228 ~~~~ 231 (232)
T 3id6_C 228 SKYK 231 (232)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 6654
No 152
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.38 E-value=7.6e-13 Score=115.93 Aligned_cols=114 Identities=13% Similarity=0.146 Sum_probs=74.9
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCCCc--------ee----------e-ecCCCCCCCCCCeeEEEec
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRPPL--------VI----------K-GDFHAQPFDNGTFDFEFSN 174 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~~~--------~~----------~-aDa~~LPf~d~SFD~V~s~ 174 (258)
..+.+|||||||||..+..|++.|..+|+|+|+++.... +. . +|....+|++.+||+++++
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~ 115 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFIS 115 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSC
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhh
Confidence 356799999999999999999888668999999875421 11 1 2222212344566665543
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEEeccc-cCcC-cC--------CCCCCCChhHHHHHhhcCceEE
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLHVALS-RRAD-KY--------SANDLFSVKPLVKLFRESELVA 234 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~-~~~~-~y--------~~~~~~s~~~l~~lf~~~~~~~ 234 (258)
...+++|++|+|||||.+++.+... .... .. ...+.++.+++.+++.+.|+..
T Consensus 116 -------l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v 178 (232)
T 3opn_A 116 -------LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSV 178 (232)
T ss_dssp -------GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEE
T ss_pred -------HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEE
Confidence 1567899999999999998875211 0000 00 0011236788999999999753
No 153
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.37 E-value=7.2e-12 Score=115.04 Aligned_cols=134 Identities=9% Similarity=0.034 Sum_probs=95.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCC--------CCCceeeecCCCCCCCCCCeeEEEec-cccccCChH
Q 025071 114 FNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVP--------RPPLVIKGDFHAQPFDNGTFDFEFSN-VFDHALYPW 183 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~--------~~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~p~ 183 (258)
.++.+|||||||+|..+..+++.. ..+++++|++. ....++.+|+.+ |++ +||+|++. +++|+.++.
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d~~ 268 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFK-SIP--SADAVLLKWVLHDWNDEQ 268 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCCCSSEEEEECCTTT-CCC--CCSEEEEESCGGGSCHHH
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhcccCCCcEEEeCccCC-CCC--CceEEEEcccccCCCHHH
Confidence 456899999999999999988753 34799999731 113467888877 776 49999995 888898887
Q ss_pred --HHHHHHHhcccC---CcEEEEEeccccCcCc------C-----------CCCCCCChhHHHHHhhcCceEEeeeecCC
Q 025071 184 --KFVGEIERTLKP---AGVCVLHVALSRRADK------Y-----------SANDLFSVKPLVKLFRESELVAVRKVDGF 241 (258)
Q Consensus 184 --~~l~Ei~RVLKP---GG~lii~v~~~~~~~~------y-----------~~~~~~s~~~l~~lf~~~~~~~v~~v~g~ 241 (258)
+++++++|+||| ||++++.......... + .....++.+++.++++++|+..+......
T Consensus 269 ~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~ 348 (358)
T 1zg3_A 269 SLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPIS 348 (358)
T ss_dssp HHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEEEET
T ss_pred HHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEEecC
Confidence 899999999999 9999886432111000 0 11334688999999999998665544333
Q ss_pred CCeEEEEEE
Q 025071 242 GLDTEVVFR 250 (258)
Q Consensus 242 ~l~~~~~f~ 250 (258)
+....+..+
T Consensus 349 ~~~~vie~~ 357 (358)
T 1zg3_A 349 GFKSLIEVY 357 (358)
T ss_dssp TTEEEEEEE
T ss_pred CCcEEEEEe
Confidence 444444443
No 154
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.37 E-value=1.1e-12 Score=114.85 Aligned_cols=91 Identities=14% Similarity=0.171 Sum_probs=68.5
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC---------------------CCceeeecCCC-CC--CCCCCe
Q 025071 114 FNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR---------------------PPLVIKGDFHA-QP--FDNGTF 168 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~---------------------~~~~~~aDa~~-LP--f~d~SF 168 (258)
.++.+|||||||+|..+..|++. +...++|+|+++. ...++++|+.. +| |++++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 45678999999999999999875 3457999998631 12468899987 78 899999
Q ss_pred eEEEeccccccC---------ChHHHHHHHHhcccCCcEEEEEec
Q 025071 169 DFEFSNVFDHAL---------YPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 169 D~V~s~~l~h~~---------~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
|.|+++.-+.+. ....+++++.|+|||||.+++.+.
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 999874211110 013688999999999999998754
No 155
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.36 E-value=5.1e-13 Score=115.57 Aligned_cols=90 Identities=17% Similarity=0.141 Sum_probs=68.4
Q ss_pred CCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCC---------------CCceeeecCCCC-C--CCCCCeeEEEecc
Q 025071 115 NESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPR---------------PPLVIKGDFHAQ-P--FDNGTFDFEFSNV 175 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~---------------~~~~~~aDa~~L-P--f~d~SFD~V~s~~ 175 (258)
++.+|||||||+|..+..+++.. ...|+|+|+++. ...++++|+.++ | +++++||.|+++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 56799999999999999998753 347999998742 124678888874 4 8899999999852
Q ss_pred ccccC---C------hHHHHHHHHhcccCCcEEEEEec
Q 025071 176 FDHAL---Y------PWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 176 l~h~~---~------p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
-..+. . ...++++++|+|||||.+++.+.
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 11111 1 12589999999999999998764
No 156
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.36 E-value=1.8e-14 Score=124.27 Aligned_cols=122 Identities=17% Similarity=0.163 Sum_probs=89.1
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEec-ccc
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSN-VFD 177 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~ 177 (258)
++.+|||+|||+|..+..+++.| .+|+|+|+++. ...++++|+.+++ ++++||+|+++ .++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcC
Confidence 67899999999999999999887 58999999742 2347888988887 67899999996 677
Q ss_pred ccCChHHHHHHHHhcccCCcEEEEEeccc-cCcCcCCCCCCCChhHHHHHhhcCceEEeeee
Q 025071 178 HALYPWKFVGEIERTLKPAGVCVLHVALS-RRADKYSANDLFSVKPLVKLFRESELVAVRKV 238 (258)
Q Consensus 178 h~~~p~~~l~Ei~RVLKPGG~lii~v~~~-~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~~v 238 (258)
|..++...+.+++|+|||||.+++..... .....+......+.+++..++...|...+...
T Consensus 156 ~~~~~~~~~~~~~~~L~pgG~~i~~~~~~~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~~~ 217 (241)
T 3gdh_A 156 GPDYATAETFDIRTMMSPDGFEIFRLSKKITNNIVYFLPRNADIDQVASLAGPGGQVEIEQN 217 (241)
T ss_dssp SGGGGGSSSBCTTTSCSSCHHHHHHHHHHHCSCEEEEEETTBCHHHHHHTTCTTCCEEEEEE
T ss_pred CcchhhhHHHHHHhhcCCcceeHHHHHHhhCCceEEECCCCCCHHHHHHHhccCCCEEEEeh
Confidence 77666667789999999999966542110 00001111223467888898887776665544
No 157
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.36 E-value=5.7e-13 Score=113.10 Aligned_cols=90 Identities=17% Similarity=0.032 Sum_probs=69.3
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-----------------CCceeeecCCCCCC--CCCC-eeEEEec
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-----------------PPLVIKGDFHAQPF--DNGT-FDFEFSN 174 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-----------------~~~~~~aDa~~LPf--~d~S-FD~V~s~ 174 (258)
++.+|||+|||+|..+..+.+.|...|+|+|+++. ...++++|+.+++. ++++ ||+|+++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 56799999999999998877667668999998741 22467788776533 4788 9999996
Q ss_pred cccccCChHHHHHHH--HhcccCCcEEEEEec
Q 025071 175 VFDHALYPWKFVGEI--ERTLKPAGVCVLHVA 204 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei--~RVLKPGG~lii~v~ 204 (258)
...|..+...+++++ .|+|||||.+++...
T Consensus 133 ~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~ 164 (201)
T 2ift_A 133 PPFHFNLAEQAISLLCENNWLKPNALIYVETE 164 (201)
T ss_dssp CCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCCCCccHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 333445667788899 789999999998764
No 158
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.35 E-value=2.4e-12 Score=113.21 Aligned_cols=95 Identities=21% Similarity=0.340 Sum_probs=76.5
Q ss_pred HHHhcCCCCCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC------------------CCceeeecCCCCCCCCC
Q 025071 107 LKQRHFLFNESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR------------------PPLVIKGDFHAQPFDNG 166 (258)
Q Consensus 107 L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~------------------~~~~~~aDa~~LPf~d~ 166 (258)
++....+.++.+|||+|||+|..+..+++. + ..+|+|+|+++. ...+..+|+.+++++++
T Consensus 91 i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~ 170 (280)
T 1i9g_A 91 IVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDG 170 (280)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTT
T ss_pred HHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCC
Confidence 333344678889999999999999988874 3 358999998631 12467789999999999
Q ss_pred CeeEEEeccccccCChHHHHHHHHhcccCCcEEEEEecc
Q 025071 167 TFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 167 SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
+||+|+++ ..+|+.+++++.|+|||||++++.++.
T Consensus 171 ~~D~v~~~----~~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 171 SVDRAVLD----MLAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp CEEEEEEE----SSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred ceeEEEEC----CcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 99999983 457788999999999999999998763
No 159
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.35 E-value=3.3e-12 Score=111.60 Aligned_cols=108 Identities=13% Similarity=0.124 Sum_probs=78.3
Q ss_pred CCCEEEEECCCCCHHHHHHHhc----C-CCcEEEEeCCCCC----------CceeeecCCCC---CCCCC-CeeEEEecc
Q 025071 115 NESKALSIGARVGQEVAALKLV----G-VSDSIGIDLVPRP----------PLVIKGDFHAQ---PFDNG-TFDFEFSNV 175 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~----g-~~~v~GvD~s~~~----------~~~~~aDa~~L---Pf~d~-SFD~V~s~~ 175 (258)
++.+|||||||+|..+..|++. + ..+|+|+|+++.. ..++++|+.++ |+.++ +||+|++..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 4679999999999999998875 2 3589999998643 24678999884 76554 899999853
Q ss_pred ccccCChHHHHHHHHh-cccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCc
Q 025071 176 FDHALYPWKFVGEIER-TLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESE 231 (258)
Q Consensus 176 l~h~~~p~~~l~Ei~R-VLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~ 231 (258)
. |. +...++.|+.| +|||||++++..... ...-++...+.+++++.+
T Consensus 161 ~-~~-~~~~~l~~~~r~~LkpGG~lv~~d~~~-------~~~~~~~~~~~~~l~~~~ 208 (236)
T 2bm8_A 161 A-HA-NTFNIMKWAVDHLLEEGDYFIIEDMIP-------YWYRYAPQLFSEYLGAFR 208 (236)
T ss_dssp S-CS-SHHHHHHHHHHHTCCTTCEEEECSCHH-------HHHHHCHHHHHHHHHTTT
T ss_pred c-hH-hHHHHHHHHHHhhCCCCCEEEEEeCcc-------cccccCHHHHHHHHHhCc
Confidence 3 43 67789999998 999999999852100 000123356778887763
No 160
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.34 E-value=6.5e-12 Score=112.26 Aligned_cols=117 Identities=13% Similarity=0.089 Sum_probs=84.0
Q ss_pred CCCEEEEECCCC---CHHHHHHHhc-CCCcEEEEeCCCC-------------CCceeeecCCCCC-----------CCCC
Q 025071 115 NESKALSIGARV---GQEVAALKLV-GVSDSIGIDLVPR-------------PPLVIKGDFHAQP-----------FDNG 166 (258)
Q Consensus 115 ~~~~VLDIGcGt---G~~~~~L~~~-g~~~v~GvD~s~~-------------~~~~~~aDa~~LP-----------f~d~ 166 (258)
...+|||||||+ |.....+.+. ...+|+|+|+++. ...++++|+.+.+ ++.+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 347999999999 9887666553 2358999998742 2346888886531 3335
Q ss_pred CeeEEEec-cccccCC--hHHHHHHHHhcccCCcEEEEEeccccCc-------CcC----CCCCCCChhHHHHHhhcCc
Q 025071 167 TFDFEFSN-VFDHALY--PWKFVGEIERTLKPAGVCVLHVALSRRA-------DKY----SANDLFSVKPLVKLFRESE 231 (258)
Q Consensus 167 SFD~V~s~-~l~h~~~--p~~~l~Ei~RVLKPGG~lii~v~~~~~~-------~~y----~~~~~~s~~~l~~lf~~~~ 231 (258)
+||+|+++ +++|+.+ +..+++|++|+|||||++++........ ..| .....++.+++.++|.+.+
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ei~~~l~G~~ 235 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLPAQQKLARITRENLGEGWARTPEEIERQFGDFE 235 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCHHHHHHHHHHHHHHSCCCCBCHHHHHHTTTTCE
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchHHHHHHHHHHHhcCCCCccCCHHHHHHHhCCCe
Confidence 89999985 7888886 7899999999999999999875432110 011 1234578999999996443
No 161
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.33 E-value=1.7e-12 Score=110.26 Aligned_cols=90 Identities=9% Similarity=-0.042 Sum_probs=71.1
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCC-CCCCCCCeeEEEeccccc
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHA-QPFDNGTFDFEFSNVFDH 178 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~-LPf~d~SFD~V~s~~l~h 178 (258)
++.+|||+|||+|..+..+.+.|..+|+|+|+++. ...++++|+.+ +|+.+++||+|+++...|
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 56799999999999998877767668999998742 23467888776 677788999999963334
Q ss_pred cCChHHHHHHHHh--cccCCcEEEEEec
Q 025071 179 ALYPWKFVGEIER--TLKPAGVCVLHVA 204 (258)
Q Consensus 179 ~~~p~~~l~Ei~R--VLKPGG~lii~v~ 204 (258)
......+++++.+ +|||||++++...
T Consensus 134 ~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 134 RGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp TTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 5567788888865 6999999998764
No 162
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.33 E-value=5.4e-12 Score=111.64 Aligned_cols=114 Identities=16% Similarity=0.225 Sum_probs=85.5
Q ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCee
Q 025071 108 KQRHFLFNESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFD 169 (258)
Q Consensus 108 ~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD 169 (258)
+....+.++.+|||+|||+|..+..+++. + ..+|+|+|+++. ...+..+|+.+. +++++||
T Consensus 105 ~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D 183 (277)
T 1o54_A 105 AMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVD 183 (277)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEE
T ss_pred HHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccC
Confidence 33345677889999999999999988875 4 358999998642 123567787776 7788999
Q ss_pred EEEeccccccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEeee
Q 025071 170 FEFSNVFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVRK 237 (258)
Q Consensus 170 ~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~~ 237 (258)
+|+++ .+++..+++++.++|||||++++..+... ...++.+.+++.|+..+..
T Consensus 184 ~V~~~----~~~~~~~l~~~~~~L~pgG~l~~~~~~~~-----------~~~~~~~~l~~~gf~~~~~ 236 (277)
T 1o54_A 184 ALFLD----VPDPWNYIDKCWEALKGGGRFATVCPTTN-----------QVQETLKKLQELPFIRIEV 236 (277)
T ss_dssp EEEEC----CSCGGGTHHHHHHHEEEEEEEEEEESSHH-----------HHHHHHHHHHHSSEEEEEE
T ss_pred EEEEC----CcCHHHHHHHHHHHcCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCCceeEE
Confidence 99984 45778899999999999999999875311 2356677777777765443
No 163
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.32 E-value=5.7e-12 Score=106.53 Aligned_cols=92 Identities=21% Similarity=0.151 Sum_probs=69.3
Q ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHhcCC--CcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeE
Q 025071 108 KQRHFLFNESKALSIGARVGQEVAALKLVGV--SDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDF 170 (258)
Q Consensus 108 ~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~--~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~ 170 (258)
.+...+.++.+|||||||+|..+..+++.+. .+|+|+|+++. ...+..+|+......+++||+
T Consensus 70 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 149 (215)
T 2yxe_A 70 CELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDR 149 (215)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEE
T ss_pred HHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeE
Confidence 3333456788999999999999998887542 58999998742 124567777443223789999
Q ss_pred EEec-cccccCChHHHHHHHHhcccCCcEEEEEecc
Q 025071 171 EFSN-VFDHALYPWKFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 171 V~s~-~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
|+++ .++|+. +++.|+|||||++++.++.
T Consensus 150 v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 150 IYTTAAGPKIP------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp EEESSBBSSCC------HHHHHTEEEEEEEEEEESS
T ss_pred EEECCchHHHH------HHHHHHcCCCcEEEEEECC
Confidence 9996 677765 5899999999999998763
No 164
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.32 E-value=7.1e-12 Score=114.18 Aligned_cols=93 Identities=15% Similarity=0.117 Sum_probs=67.4
Q ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeC----CCC-----C--------Cceeee-cCCCCCCCCCCee
Q 025071 108 KQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDL----VPR-----P--------PLVIKG-DFHAQPFDNGTFD 169 (258)
Q Consensus 108 ~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~----s~~-----~--------~~~~~a-Da~~LPf~d~SFD 169 (258)
.+...+.++.+|||||||+|..+..+++. ..|+|+|+ ++. . ..++++ |+..+| +++||
T Consensus 75 ~~~~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD 150 (305)
T 2p41_A 75 VERNLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCD 150 (305)
T ss_dssp HHTTSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCS
T ss_pred HHcCCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCC
Confidence 33445667889999999999999999887 37999998 321 0 124556 777665 67999
Q ss_pred EEEec-ccc---ccCChH---HHHHHHHhcccCCcEEEEEec
Q 025071 170 FEFSN-VFD---HALYPW---KFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 170 ~V~s~-~l~---h~~~p~---~~l~Ei~RVLKPGG~lii~v~ 204 (258)
+|+|+ ++. +..+.. .++.++.|+|||||.+++.+.
T Consensus 151 ~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 151 TLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred EEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 99996 322 222222 478999999999999888654
No 165
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.32 E-value=3.7e-12 Score=113.71 Aligned_cols=111 Identities=12% Similarity=0.096 Sum_probs=83.5
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEeccc
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSNVF 176 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~~l 176 (258)
+.++.+|||+|||+|..+..+++.|..+|+|+|+++. ...++++|+.+++. +++||+|+++..
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc
Confidence 4578899999999999999999877557999998742 12378899999887 789999998622
Q ss_pred cccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCce
Q 025071 177 DHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESEL 232 (258)
Q Consensus 177 ~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~ 232 (258)
.....+++++.|+|||||++++....... . ......+++.+.+++.|+
T Consensus 202 ---~~~~~~l~~~~~~LkpgG~l~~~~~~~~~---~--~~~~~~~~i~~~~~~~G~ 249 (278)
T 2frn_A 202 ---VRTHEFIPKALSIAKDGAIIHYHNTVPEK---L--MPREPFETFKRITKEYGY 249 (278)
T ss_dssp ---SSGGGGHHHHHHHEEEEEEEEEEEEEEGG---G--TTTTTHHHHHHHHHHTTC
T ss_pred ---hhHHHHHHHHHHHCCCCeEEEEEEeeccc---c--ccccHHHHHHHHHHHcCC
Confidence 23457889999999999999887543210 0 011245778888888774
No 166
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.31 E-value=1.4e-12 Score=127.64 Aligned_cols=89 Identities=20% Similarity=0.268 Sum_probs=73.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCC--CCCCCCeeEEEec-c
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQ--PFDNGTFDFEFSN-V 175 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~L--Pf~d~SFD~V~s~-~ 175 (258)
..+.+|||||||+|.++..|++.|. +|+|||.++. ...+.+++++++ ++++++||+|+|. +
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 4567999999999999999999996 8999998742 124678888888 6788999999995 8
Q ss_pred ccccCChHHH--HHHHHhcccCCcEEEEEe
Q 025071 176 FDHALYPWKF--VGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 176 l~h~~~p~~~--l~Ei~RVLKPGG~lii~v 203 (258)
++|+.+|..+ +.++.+.|+++|..++..
T Consensus 144 ~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 144 FHHIVHLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred hhcCCCHHHHHHHHHHHHHhccccceeeEE
Confidence 9999988643 467888899999766653
No 167
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.31 E-value=3.8e-12 Score=115.93 Aligned_cols=90 Identities=21% Similarity=0.205 Sum_probs=67.4
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhc-CC-CcEEEEeCCCC--------------------------CCceeeecCCCC--
Q 025071 112 FLFNESKALSIGARVGQEVAALKLV-GV-SDSIGIDLVPR--------------------------PPLVIKGDFHAQ-- 161 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~-g~-~~v~GvD~s~~--------------------------~~~~~~aDa~~L-- 161 (258)
.+.++.+|||+|||+|..+..+++. |. .+|+|+|+++. ...+..+|+.++
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~ 181 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE 181 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc
Confidence 4678899999999999999998875 53 58999998641 234678898887
Q ss_pred CCCCCCeeEEEeccccccCChHHHHHHHHhcccCCcEEEEEecc
Q 025071 162 PFDNGTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 162 Pf~d~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
++++++||+|+++. .+|..+++++.|+|||||.+++..+.
T Consensus 182 ~~~~~~fD~V~~~~----~~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 182 DIKSLTFDAVALDM----LNPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp ------EEEEEECS----SSTTTTHHHHGGGEEEEEEEEEEESS
T ss_pred ccCCCCeeEEEECC----CCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 67888999999853 34556789999999999999987653
No 168
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.31 E-value=5.1e-12 Score=114.58 Aligned_cols=94 Identities=17% Similarity=0.147 Sum_probs=73.3
Q ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCC--CcEEEEeCCCC---------------CCceeeecCCCCCCCCCCe
Q 025071 106 DLKQRHFLFNESKALSIGARVGQEVAALKLVGV--SDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTF 168 (258)
Q Consensus 106 ~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~--~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SF 168 (258)
.+++...+.++.+|||||||+|..+..+++.+. .+|+|+|+++. ...+..+|+.+.+.++++|
T Consensus 66 ~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~f 145 (317)
T 1dl5_A 66 LFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPY 145 (317)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred HHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCe
Confidence 334433466889999999999999998887542 35999998742 1346788988876678899
Q ss_pred eEEEec-cccccCChHHHHHHHHhcccCCcEEEEEecc
Q 025071 169 DFEFSN-VFDHALYPWKFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 169 D~V~s~-~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
|+|++. .++|+. +++.++|||||++++.+..
T Consensus 146 D~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 146 DVIFVTVGVDEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp EEEEECSBBSCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred EEEEEcCCHHHHH------HHHHHhcCCCcEEEEEECC
Confidence 999996 677765 6899999999999998653
No 169
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.30 E-value=1.4e-11 Score=115.59 Aligned_cols=86 Identities=15% Similarity=0.116 Sum_probs=69.4
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEec----c
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSN----V 175 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~----~ 175 (258)
++++|||||||+|.++...++.|..+|+|||.++. ...++.+|++.+.++ +.||+|+|. .
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~ 161 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYG 161 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTT
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccccc
Confidence 67899999999999998888889888999998741 124788999998887 679999995 3
Q ss_pred ccccCChHHHHHHHHhcccCCcEEEE
Q 025071 176 FDHALYPWKFVGEIERTLKPAGVCVL 201 (258)
Q Consensus 176 l~h~~~p~~~l~Ei~RVLKPGG~lii 201 (258)
+.+-.....++....|.|||||.++-
T Consensus 162 l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccchhhhHHHHHHhhCCCCceECC
Confidence 44444567788889999999997653
No 170
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.30 E-value=2.3e-11 Score=107.48 Aligned_cols=129 Identities=12% Similarity=0.059 Sum_probs=87.8
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCC----------C---------CceeeecCCCC-------CCCC
Q 025071 113 LFNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPR----------P---------PLVIKGDFHAQ-------PFDN 165 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~----------~---------~~~~~aDa~~L-------Pf~d 165 (258)
..++.+|||+|||+|..+..+++.. ...|+|+|+++. . ..++++|+.++ ++++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 3467799999999999999888764 358999998631 1 24678898887 4778
Q ss_pred CCeeEEEec-cccc------------------cCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHH
Q 025071 166 GTFDFEFSN-VFDH------------------ALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKL 226 (258)
Q Consensus 166 ~SFD~V~s~-~l~h------------------~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~l 226 (258)
++||+|+++ -+.. ......+++++.++|||||++++..+.. ...++.+.
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------------~~~~~~~~ 181 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ------------SVAEIIAA 181 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG------------GHHHHHHH
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH------------HHHHHHHH
Confidence 999999997 1111 1235678999999999999999876531 24567777
Q ss_pred hhcC-ceEEeeeec-CCCCe---EEEEEEeCC
Q 025071 227 FRES-ELVAVRKVD-GFGLD---TEVVFRKKK 253 (258)
Q Consensus 227 f~~~-~~~~v~~v~-g~~l~---~~~~f~K~~ 253 (258)
+++. +.+.+..+. ..+-+ ..+.++|.+
T Consensus 182 l~~~~~~~~i~~v~~~~~~~~~~~lv~~~k~~ 213 (260)
T 2ozv_A 182 CGSRFGGLEITLIHPRPGEDAVRMLVTAIKGS 213 (260)
T ss_dssp HTTTEEEEEEEEEESSTTSCCCEEEEEEEETC
T ss_pred HHhcCCceEEEEEcCCCCCCceEEEEEEEeCC
Confidence 7653 233444332 21111 366777754
No 171
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.30 E-value=3.2e-12 Score=111.37 Aligned_cols=88 Identities=19% Similarity=0.239 Sum_probs=69.4
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCC-CcEEEEeCCCC-----------------------CCceeeecCCC-CC--CCC
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGV-SDSIGIDLVPR-----------------------PPLVIKGDFHA-QP--FDN 165 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~-~~v~GvD~s~~-----------------------~~~~~~aDa~~-LP--f~d 165 (258)
+.++.+|||||||+|..+..+++.+. ..|+|+|+++. ...++++|+.+ +| |++
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 34678999999999999999987653 47999998631 12467889886 77 889
Q ss_pred CCeeEEEeccccccCCh-------------HHHHHHHHhcccCCcEEEEEec
Q 025071 166 GTFDFEFSNVFDHALYP-------------WKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 166 ~SFD~V~s~~l~h~~~p-------------~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
+++|.|+.. .++| ..+++++.|+|||||.+++.+.
T Consensus 127 ~~~d~v~~~----~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 127 GQLSKMFFC----FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp TCEEEEEEE----SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred cccCEEEEE----CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 999999863 1223 4789999999999999999754
No 172
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.30 E-value=2.1e-11 Score=104.87 Aligned_cols=89 Identities=19% Similarity=0.336 Sum_probs=71.6
Q ss_pred cCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEec
Q 025071 111 HFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSN 174 (258)
Q Consensus 111 ~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~ 174 (258)
..+.++.+|||+|||+|..+..+++.+ .+++|+|+++. ...+..+|+.+..+++++||+|+++
T Consensus 87 ~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 165 (248)
T 2yvl_A 87 LNLNKEKRVLEFGTGSGALLAVLSEVA-GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVD 165 (248)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEEC
T ss_pred cCCCCCCEEEEeCCCccHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEEC
Confidence 345678899999999999999888764 58999998641 1245677887754477899999984
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEEec
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
..++..+++++.++|||||++++..+
T Consensus 166 ----~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 166 ----VREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp ----SSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred ----CcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 34677889999999999999999876
No 173
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.29 E-value=8.4e-13 Score=106.83 Aligned_cols=89 Identities=16% Similarity=0.123 Sum_probs=67.4
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------------CCceeeecCCC-CCC---CCCCeeEEEeccc
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------------PPLVIKGDFHA-QPF---DNGTFDFEFSNVF 176 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------------~~~~~~aDa~~-LPf---~d~SFD~V~s~~l 176 (258)
++.+|||+|||+|..+..+++.|. .|+|+|+++. ...+.++|+.+ ++. .+++||+|+++..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 119 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPP 119 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCC
Confidence 678999999999999999998876 4999998742 23467777765 332 2358999999732
Q ss_pred cccCChHHHHHHHH--hcccCCcEEEEEecc
Q 025071 177 DHALYPWKFVGEIE--RTLKPAGVCVLHVAL 205 (258)
Q Consensus 177 ~h~~~p~~~l~Ei~--RVLKPGG~lii~v~~ 205 (258)
.| .+....++++. |+|||||.+++..+.
T Consensus 120 ~~-~~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 120 YA-MDLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp TT-SCTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred Cc-hhHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 23 45566777777 999999999987653
No 174
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.28 E-value=3e-11 Score=109.74 Aligned_cols=114 Identities=15% Similarity=0.115 Sum_probs=80.2
Q ss_pred CCCCCCEEEEECC------CCCHHHHHHHhcC-CCcEEEEeCCCC--CCce-eeecCCCCCCCCCCeeEEEecccccc--
Q 025071 112 FLFNESKALSIGA------RVGQEVAALKLVG-VSDSIGIDLVPR--PPLV-IKGDFHAQPFDNGTFDFEFSNVFDHA-- 179 (258)
Q Consensus 112 ~l~~~~~VLDIGc------GtG~~~~~L~~~g-~~~v~GvD~s~~--~~~~-~~aDa~~LPf~d~SFD~V~s~~l~h~-- 179 (258)
.+.++.+|||+|| |+|. .......+ ...|+|+|+++. ...+ +++|+.+++++ ++||+|+|+...+.
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs-~~~a~~~~~~~~V~gvDis~~v~~v~~~i~gD~~~~~~~-~~fD~Vvsn~~~~~~g 137 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT-AVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHTA-NKWDLIISDMYDPRTK 137 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH-HHHHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGCCCS-SCEEEEEECCCCCC--
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH-HHHHHHcCCCCEEEEEECCCCCCCCEEEEECccccCCcc-CcccEEEEcCCccccc
Confidence 4677889999999 4466 22222344 257999999875 2357 89999998876 68999999622111
Q ss_pred ----------CChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEeeee
Q 025071 180 ----------LYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVRKV 238 (258)
Q Consensus 180 ----------~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~~v 238 (258)
..-..+++++.|+|||||.+++.+... . ...++.+++++.|+..+..+
T Consensus 138 ~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~--------~---~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 138 HVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH--------S---WNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp -CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS--------S---CCHHHHHHHTTEEEEEEEEE
T ss_pred cccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc--------C---CHHHHHHHHHHcCCcEEEEE
Confidence 112368899999999999999865321 1 23578888888877665554
No 175
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.28 E-value=1.4e-11 Score=105.30 Aligned_cols=87 Identities=17% Similarity=0.213 Sum_probs=64.7
Q ss_pred CCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC----------------CCceeeecCCC-CCCCC-----CCeeE
Q 025071 115 NESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR----------------PPLVIKGDFHA-QPFDN-----GTFDF 170 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~----------------~~~~~~aDa~~-LPf~d-----~SFD~ 170 (258)
++.+|||||||+|..+..+++. + ..+|+|+|+++. ...++++|+.+ +|..+ ++||+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 5689999999999999999873 2 358999998752 13467788644 44322 79999
Q ss_pred EEec-cccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 171 EFSN-VFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 171 V~s~-~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
|++. ..++..+...++.++ |+|||||++++.
T Consensus 138 V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~ 169 (221)
T 3u81_A 138 VFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLAD 169 (221)
T ss_dssp EEECSCGGGHHHHHHHHHHT-TCCCTTCEEEES
T ss_pred EEEcCCcccchHHHHHHHhc-cccCCCeEEEEe
Confidence 9996 355554455667777 999999999884
No 176
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.28 E-value=5.5e-12 Score=112.66 Aligned_cols=115 Identities=14% Similarity=0.180 Sum_probs=78.6
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeC-CCCC-------------------------CceeeecCCCC--CC-
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDL-VPRP-------------------------PLVIKGDFHAQ--PF- 163 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~-s~~~-------------------------~~~~~aDa~~L--Pf- 163 (258)
..++.+|||+|||+|..+..+++.|..+|+|+|+ ++.. ..+...|.... .+
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred hcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 3467899999999999999998887668999999 5421 11121111110 11
Q ss_pred ---CCCCeeEEEe-ccccccCChHHHHHHHHhccc---C--CcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCc-eE
Q 025071 164 ---DNGTFDFEFS-NVFDHALYPWKFVGEIERTLK---P--AGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESE-LV 233 (258)
Q Consensus 164 ---~d~SFD~V~s-~~l~h~~~p~~~l~Ei~RVLK---P--GG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~-~~ 233 (258)
++++||+|++ .++.|..+...+++++.++|| | ||++++.....+. .......++.+.+++.| +.
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~------~~~~~~~~~~~~l~~~G~f~ 230 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRP------HLAERDLAFFRLVNADGALI 230 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------------CTHHHHHHHHSTTEE
T ss_pred hhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeec------ccchhHHHHHHHHHhcCCEE
Confidence 4689999998 578888888999999999999 9 9998886543211 00112356677777777 54
No 177
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.28 E-value=8.1e-12 Score=119.30 Aligned_cols=97 Identities=19% Similarity=0.091 Sum_probs=70.7
Q ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC------------------------CCceeeecCC
Q 025071 105 QDLKQRHFLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR------------------------PPLVIKGDFH 159 (258)
Q Consensus 105 ~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~------------------------~~~~~~aDa~ 159 (258)
..+++...+.++.+|||||||+|..+..+++. |...|+|+|+++. ...++++|..
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~ 311 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF 311 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcc
Confidence 33444334567889999999999999998874 6567999998642 1123455544
Q ss_pred CC--CC--CCCCeeEEEec-cccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 160 AQ--PF--DNGTFDFEFSN-VFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 160 ~L--Pf--~d~SFD~V~s~-~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
.. +| .+++||+|+++ .+ +..++..+++|+.|+|||||++++.
T Consensus 312 ~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 312 VDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp TTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred ccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEe
Confidence 32 33 35799999986 44 4456777889999999999999886
No 178
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.28 E-value=1.3e-11 Score=108.25 Aligned_cols=86 Identities=17% Similarity=0.161 Sum_probs=65.5
Q ss_pred CCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCCC----------------CceeeecCCCC-CCC-----CCCeeE
Q 025071 115 NESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPRP----------------PLVIKGDFHAQ-PFD-----NGTFDF 170 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~~----------------~~~~~aDa~~L-Pf~-----d~SFD~ 170 (258)
++.+|||||||+|..+..|++. + ...|+|+|+++.. ..++++|+.+. +.. +++||+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 5679999999999999999873 2 3589999997632 23567777553 322 589999
Q ss_pred EEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 171 EFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 171 V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
|++..- ..+...+++++.|+|||||++++.
T Consensus 140 V~~d~~--~~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 140 IFIDAD--KTNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEEESC--GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEcCC--hHHhHHHHHHHHHhcCCCeEEEEE
Confidence 998532 234567899999999999999985
No 179
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.28 E-value=1.3e-10 Score=107.12 Aligned_cols=138 Identities=15% Similarity=0.089 Sum_probs=96.4
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCC--------------CCCceeeecCCCCCCCCCCeeEEEec-c
Q 025071 112 FLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVP--------------RPPLVIKGDFHAQPFDNGTFDFEFSN-V 175 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~--------------~~~~~~~aDa~~LPf~d~SFD~V~s~-~ 175 (258)
.+....+|||||||+|..+..+++. +..+++..|... ....++.+|+.+.|.++ +|+|++. +
T Consensus 176 ~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~--~D~~~~~~v 253 (353)
T 4a6d_A 176 DLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPE--ADLYILARV 253 (353)
T ss_dssp CGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSCCCC--CSEEEEESS
T ss_pred CcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccCCCCC--ceEEEeeee
Confidence 4456679999999999999988764 334677788511 12357788988767664 6999984 7
Q ss_pred ccccCChH--HHHHHHHhcccCCcEEEEEeccc---cCcCc-----------CCCCCCCChhHHHHHhhcCceEEeeeec
Q 025071 176 FDHALYPW--KFVGEIERTLKPAGVCVLHVALS---RRADK-----------YSANDLFSVKPLVKLFRESELVAVRKVD 239 (258)
Q Consensus 176 l~h~~~p~--~~l~Ei~RVLKPGG~lii~v~~~---~~~~~-----------y~~~~~~s~~~l~~lf~~~~~~~v~~v~ 239 (258)
++++.++. +.+++++++|+|||+++|.-... +.... .....-++.+++.++++++|+..++...
T Consensus 254 lh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~~ 333 (353)
T 4a6d_A 254 LHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKK 333 (353)
T ss_dssp GGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 88887764 56899999999999998874321 11110 0112336889999999999998777554
Q ss_pred CCCCeEEEEEEe
Q 025071 240 GFGLDTEVVFRK 251 (258)
Q Consensus 240 g~~l~~~~~f~K 251 (258)
-.+....++-||
T Consensus 334 ~~~~~~~i~ArK 345 (353)
T 4a6d_A 334 TGAIYDAILARK 345 (353)
T ss_dssp CSSSCEEEEEEC
T ss_pred cCCceEEEEEEe
Confidence 333335566666
No 180
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.27 E-value=1.8e-11 Score=114.41 Aligned_cols=109 Identities=17% Similarity=0.178 Sum_probs=77.5
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCCC------------------CceeeecCCCCCCCCCCeeEEEec
Q 025071 114 FNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPRP------------------PLVIKGDFHAQPFDNGTFDFEFSN 174 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~~------------------~~~~~aDa~~LPf~d~SFD~V~s~ 174 (258)
.++.+|||+|||+|..+..+++.+ ..+|+|+|+++.. ..+..+|+.+ ++++++||+|+++
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~n 299 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCN 299 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEEC
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEEC
Confidence 345899999999999999998764 4589999987421 1247788877 7888999999997
Q ss_pred -cccccC---C--hHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceE
Q 025071 175 -VFDHAL---Y--PWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELV 233 (258)
Q Consensus 175 -~l~h~~---~--p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~ 233 (258)
.+++.. + ...+++++.|+|||||++++..+.. ..| ...+.+.|.++..+
T Consensus 300 ppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~---~~~-------~~~l~~~fg~~~~~ 354 (375)
T 4dcm_A 300 PPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH---LDY-------FHKLKKIFGNCTTI 354 (375)
T ss_dssp CCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETT---SCH-------HHHHHHHHSCCEEE
T ss_pred CCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECC---cCH-------HHHHHHhcCCEEEE
Confidence 554321 1 2367899999999999999975421 111 35566777755433
No 181
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.26 E-value=1.4e-11 Score=105.14 Aligned_cols=87 Identities=24% Similarity=0.312 Sum_probs=69.4
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhc-CC-CcEEEEeCCCC--------------------CCceeeecCCCCCCCCCCeeE
Q 025071 113 LFNESKALSIGARVGQEVAALKLV-GV-SDSIGIDLVPR--------------------PPLVIKGDFHAQPFDNGTFDF 170 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~-g~-~~v~GvD~s~~--------------------~~~~~~aDa~~LPf~d~SFD~ 170 (258)
+.++.+|||+|||+|..+..+++. |. .+|+|+|+++. ...+.++|+...+.++++||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 567889999999999999988865 42 48999998641 234677888877777889999
Q ss_pred EEec-cccccCChHHHHHHHHhcccCCcEEEEEecc
Q 025071 171 EFSN-VFDHALYPWKFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 171 V~s~-~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
|+++ .++|+. +++.|+|||||++++.+..
T Consensus 155 i~~~~~~~~~~------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAPVVP------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred EEECCchHHHH------HHHHHhcCCCcEEEEEEec
Confidence 9986 555554 6899999999999998753
No 182
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.26 E-value=1.3e-11 Score=106.60 Aligned_cols=87 Identities=21% Similarity=0.217 Sum_probs=67.6
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCC-eeEEEec-
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGT-FDFEFSN- 174 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~S-FD~V~s~- 174 (258)
.+.++.+|||||||+|..+..+++.+..+|+|+|+++. ...+..+|+ ..++++++ ||+|+++
T Consensus 88 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~ 166 (235)
T 1jg1_A 88 NLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVTA 166 (235)
T ss_dssp TCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECS
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEECC
Confidence 45678899999999999999888753258999998642 124567776 56776655 9999995
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEEecc
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
.++|+. .++.++|||||++++.++.
T Consensus 167 ~~~~~~------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 167 GAPKIP------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp BBSSCC------HHHHHTEEEEEEEEEEECS
T ss_pred cHHHHH------HHHHHhcCCCcEEEEEEec
Confidence 666665 4899999999999998763
No 183
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.26 E-value=6.3e-12 Score=113.94 Aligned_cols=116 Identities=22% Similarity=0.250 Sum_probs=81.6
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC-------------------CCceeeecCCCCCC--CCCCeeEE
Q 025071 114 FNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR-------------------PPLVIKGDFHAQPF--DNGTFDFE 171 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~-------------------~~~~~~aDa~~LPf--~d~SFD~V 171 (258)
.++.+|||||||+|..+..+++. +..+|+++|+++. ...++.+|+.+.+. .+++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 56789999999999999999876 3468999998631 12467788877665 48899999
Q ss_pred Eecccccc-CCh----HHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEee
Q 025071 172 FSNVFDHA-LYP----WKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 172 ~s~~l~h~-~~p----~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
+++...+. ... ..+++++.|+|||||++++..... + .+.....++.+.+++.|+..+.
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~-----~--~~~~~~~~~~~~l~~~GF~~v~ 236 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESI-----W--LDLELIEKMSRFIRETGFASVQ 236 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCT-----T--TCHHHHHHHHHHHHHHTCSEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCc-----c--cchHHHHHHHHHHHhCCCCcEE
Confidence 99643332 111 578999999999999999875321 0 1112456777888877764443
No 184
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.26 E-value=9.9e-11 Score=107.50 Aligned_cols=100 Identities=18% Similarity=0.053 Sum_probs=75.7
Q ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcC--CCcEEEEeCCCC---------------CCceeeecCCCCCCCCCC
Q 025071 105 QDLKQRHFLFNESKALSIGARVGQEVAALKLVG--VSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGT 167 (258)
Q Consensus 105 ~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g--~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~S 167 (258)
+.++......++.+|||+|||+|..+..++..+ ...++|+|+++. ...+.++|+.++|.++++
T Consensus 193 ~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~ 272 (354)
T 3tma_A 193 QALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPE 272 (354)
T ss_dssp HHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCC
T ss_pred HHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCC
Confidence 334444445678899999999999998887743 357999998741 245789999999998889
Q ss_pred eeEEEec-cccccC--------ChHHHHHHHHhcccCCcEEEEEec
Q 025071 168 FDFEFSN-VFDHAL--------YPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 168 FD~V~s~-~l~h~~--------~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
||+|+++ -+.... ....+++++.|+|||||.+++.++
T Consensus 273 ~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 273 VDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp CSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred CCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9999996 211111 125678999999999999999865
No 185
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.25 E-value=5.6e-12 Score=115.65 Aligned_cols=89 Identities=18% Similarity=0.163 Sum_probs=69.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCC-CcEEEEeCCCC--------------CCceeeecCCCCCCCCCCeeEEEec-ccc
Q 025071 114 FNESKALSIGARVGQEVAALKLVGV-SDSIGIDLVPR--------------PPLVIKGDFHAQPFDNGTFDFEFSN-VFD 177 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~-~~v~GvD~s~~--------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~ 177 (258)
.++.+|||+|||+|..+..+++.+. .+|+|+|+++. ...+..+|+.+ +.+++||+|+++ .++
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~--~~~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFS--EVKGRFDMIISNPPFH 272 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT--TCCSCEEEEEECCCCC
T ss_pred CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccc--cccCCeeEEEECCCcc
Confidence 3567999999999999999987653 48999998642 12356677755 447899999997 555
Q ss_pred c-----cCChHHHHHHHHhcccCCcEEEEEec
Q 025071 178 H-----ALYPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 178 h-----~~~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
+ ..+...+++++.|+|||||.+++..+
T Consensus 273 ~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 273 DGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp SSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 3 23457889999999999999999764
No 186
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.24 E-value=1.6e-11 Score=118.44 Aligned_cols=99 Identities=16% Similarity=0.163 Sum_probs=74.3
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCC---------------CCCceeeecCCCCCCCCCC
Q 025071 103 FFQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVP---------------RPPLVIKGDFHAQPFDNGT 167 (258)
Q Consensus 103 ~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~---------------~~~~~~~aDa~~LPf~d~S 167 (258)
+.+.+++.....++.+|||||||+|..+..+++.|..+|+|+|+++ ....++.+|+++++++ ++
T Consensus 146 ~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~ 224 (480)
T 3b3j_A 146 YQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQ 224 (480)
T ss_dssp HHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SC
T ss_pred HHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccC-CC
Confidence 3334444333346789999999999999999888766899999864 1234688999988876 58
Q ss_pred eeEEEecc-ccccCCh--HHHHHHHHhcccCCcEEEEE
Q 025071 168 FDFEFSNV-FDHALYP--WKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 168 FD~V~s~~-l~h~~~p--~~~l~Ei~RVLKPGG~lii~ 202 (258)
||+|+++. ++|+.+. ...+.++.|+|||||++++.
T Consensus 225 fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 225 VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp EEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred eEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 99999973 4555433 45677899999999998864
No 187
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.23 E-value=2.7e-11 Score=103.34 Aligned_cols=88 Identities=17% Similarity=0.157 Sum_probs=69.8
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCC------CcEEEEeCCCC--------------------CCceeeecCCCCC---
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGV------SDSIGIDLVPR--------------------PPLVIKGDFHAQP--- 162 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~------~~v~GvD~s~~--------------------~~~~~~aDa~~LP--- 162 (258)
.+.++.+|||||||+|..+..+++... .+|+|+|+++. ...+..+|+.+.+
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 356788999999999999998887532 38999998641 2346778888766
Q ss_pred -CCCCCeeEEEec-cccccCChHHHHHHHHhcccCCcEEEEEecc
Q 025071 163 -FDNGTFDFEFSN-VFDHALYPWKFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 163 -f~d~SFD~V~s~-~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
+++++||+|+++ .++|+. +++.++|||||++++.++.
T Consensus 157 ~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASELP------EILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHHCCEEEEEECSBBSSCC------HHHHHHEEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHHHH------HHHHHhcCCCcEEEEEEcc
Confidence 677899999996 566643 7899999999999998763
No 188
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.23 E-value=2.2e-11 Score=106.03 Aligned_cols=88 Identities=11% Similarity=0.104 Sum_probs=64.5
Q ss_pred CCCEEEEECCCCCHHHHHHHhc---CCCcEEEEeCCCC-----------C------------------------------
Q 025071 115 NESKALSIGARVGQEVAALKLV---GVSDSIGIDLVPR-----------P------------------------------ 150 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~---g~~~v~GvD~s~~-----------~------------------------------ 150 (258)
++.+|||+|||+|..+..+++. +..+|+|+|+++. .
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5679999999999999888765 2347999998741 1
Q ss_pred ---Cc-------------eeeecCCCCCC-----CCCCeeEEEec-ccccc---------CChHHHHHHHHhcccCCcEE
Q 025071 151 ---PL-------------VIKGDFHAQPF-----DNGTFDFEFSN-VFDHA---------LYPWKFVGEIERTLKPAGVC 199 (258)
Q Consensus 151 ---~~-------------~~~aDa~~LPf-----~d~SFD~V~s~-~l~h~---------~~p~~~l~Ei~RVLKPGG~l 199 (258)
.. +.++|+.+... .+++||+|+++ .+.+. .....+++++.|+|||||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 12 67788776321 45589999996 22222 12347889999999999999
Q ss_pred EEE
Q 025071 200 VLH 202 (258)
Q Consensus 200 ii~ 202 (258)
+++
T Consensus 211 ~~~ 213 (250)
T 1o9g_A 211 AVT 213 (250)
T ss_dssp EEE
T ss_pred EEe
Confidence 983
No 189
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.22 E-value=3.8e-11 Score=108.83 Aligned_cols=91 Identities=19% Similarity=0.148 Sum_probs=67.1
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC--------------------CCceeeecCCC-CCCCCCCeeEE
Q 025071 114 FNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR--------------------PPLVIKGDFHA-QPFDNGTFDFE 171 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~--------------------~~~~~~aDa~~-LPf~d~SFD~V 171 (258)
.++.+|||||||+|..+..+.+. +..+|+++|+++. ...++.+|+.+ ++..+++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 45789999999999999998876 4568999998752 12467788765 34567899999
Q ss_pred EeccccccCC-----hHHHHHHHHhcccCCcEEEEEec
Q 025071 172 FSNVFDHALY-----PWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 172 ~s~~l~h~~~-----p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
+++..++... -..+++++.|+|||||++++...
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 9964433221 16788999999999999998753
No 190
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.21 E-value=3.1e-11 Score=105.62 Aligned_cols=86 Identities=12% Similarity=0.067 Sum_probs=65.8
Q ss_pred CCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC----------------CCceeeecCCC-CCCCC--CCeeEEEe
Q 025071 115 NESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR----------------PPLVIKGDFHA-QPFDN--GTFDFEFS 173 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~----------------~~~~~~aDa~~-LPf~d--~SFD~V~s 173 (258)
++.+|||||||+|..+..+++. + ..+|+|+|+++. ...++++|+.+ +|..+ ++||+|++
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 5789999999999999999875 2 358999998642 13467788765 45433 49999998
Q ss_pred ccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 174 NVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 174 ~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
.. ...+...+++++.|+|||||++++.
T Consensus 143 d~--~~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 143 DA--DKPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp CS--CGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred CC--chHHHHHHHHHHHHhcCCCeEEEEe
Confidence 53 1234567899999999999998885
No 191
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.21 E-value=1.2e-10 Score=97.47 Aligned_cols=78 Identities=17% Similarity=0.212 Sum_probs=60.3
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------CCceeeecCCCCCCCCCCeeEEEec-cccccCC
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHALY 181 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~ 181 (258)
..++.+|||+|||+|..+..+++.|...|+|+|+++. ...++++|+.++| ++||+|+++ .++|...
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC-----
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccC
Confidence 4467899999999999999998877667999999742 3457889998876 799999997 5666543
Q ss_pred --hHHHHHHHHhcc
Q 025071 182 --PWKFVGEIERTL 193 (258)
Q Consensus 182 --p~~~l~Ei~RVL 193 (258)
...+++++.|+|
T Consensus 126 ~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 126 HSDRAFIDKAFETS 139 (200)
T ss_dssp --CHHHHHHHHHHE
T ss_pred chhHHHHHHHHHhc
Confidence 346889999998
No 192
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.20 E-value=2e-11 Score=105.52 Aligned_cols=86 Identities=17% Similarity=0.230 Sum_probs=67.4
Q ss_pred CCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCC----------------CCceeeecCCC-CC-CCCCCeeEEEecc
Q 025071 115 NESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPR----------------PPLVIKGDFHA-QP-FDNGTFDFEFSNV 175 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~----------------~~~~~~aDa~~-LP-f~d~SFD~V~s~~ 175 (258)
++.+|||||||+|..+..+++.. ..+|+|+|+++. ...++++|+.+ +| ..+++||+|++..
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 67899999999999999998742 358999998641 23577888865 45 5578999999852
Q ss_pred ccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 176 FDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 176 l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
...+...+++++.|+|||||++++.
T Consensus 151 --~~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 151 --AKAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp --TSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred --cHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 1334567899999999999999874
No 193
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.19 E-value=3.7e-11 Score=102.14 Aligned_cols=86 Identities=14% Similarity=0.093 Sum_probs=64.8
Q ss_pred CCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC----------------CCceeeecCCC-CCC-C----CCCeeE
Q 025071 115 NESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR----------------PPLVIKGDFHA-QPF-D----NGTFDF 170 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~----------------~~~~~~aDa~~-LPf-~----d~SFD~ 170 (258)
++.+|||||||+|..+..+++. + ..+|+|+|+++. ...++++|+.+ +|. . .++||+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 5679999999999999999875 2 358999998742 13467777743 222 1 179999
Q ss_pred EEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 171 EFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 171 V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
|++..- ..+...+++++.|+|||||++++.
T Consensus 144 v~~~~~--~~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 144 IYIDAD--KANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp EEECSC--GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCC--HHHHHHHHHHHHHhcCCCcEEEEe
Confidence 997531 234677899999999999999885
No 194
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.19 E-value=7.9e-11 Score=105.80 Aligned_cols=119 Identities=19% Similarity=0.273 Sum_probs=82.1
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCe---eEEEec-
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTF---DFEFSN- 174 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SF---D~V~s~- 174 (258)
++.+|||+|||+|..+..++..+..+|+|+|+++. ...++++|+.+ +++ ++| |+|+++
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~-~~~-~~f~~~D~IvsnP 200 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE-PFK-EKFASIEMILSNP 200 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG-GGG-GGTTTCCEEEECC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh-hcc-cccCCCCEEEEcC
Confidence 56799999999999999888764358999999742 13567888876 333 589 999996
Q ss_pred -ccc---cc-----CChH----------HHHHHHH-hcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEE
Q 025071 175 -VFD---HA-----LYPW----------KFVGEIE-RTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVA 234 (258)
Q Consensus 175 -~l~---h~-----~~p~----------~~l~Ei~-RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~ 234 (258)
.+. ++ .+|. .+++++. ++|||||++++.++.. ..+++.++|++. .
T Consensus 201 Pyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~------------q~~~v~~~~~~~---~ 265 (284)
T 1nv8_A 201 PYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGED------------QVEELKKIVSDT---V 265 (284)
T ss_dssp CCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTT------------CHHHHTTTSTTC---E
T ss_pred CCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECch------------HHHHHHHHHHhC---C
Confidence 110 00 1232 6789999 9999999999865421 235666677655 2
Q ss_pred eeeecCCCCeEEEEEEe
Q 025071 235 VRKVDGFGLDTEVVFRK 251 (258)
Q Consensus 235 v~~v~g~~l~~~~~f~K 251 (258)
...|-.|.++.++.++
T Consensus 266 -~~~D~~g~~R~~~~~~ 281 (284)
T 1nv8_A 266 -FLKDSAGKYRFLLLNR 281 (284)
T ss_dssp -EEECTTSSEEEEEEEC
T ss_pred -eecccCCCceEEEEEE
Confidence 2235667777665554
No 195
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.19 E-value=4.8e-11 Score=102.26 Aligned_cols=86 Identities=16% Similarity=0.259 Sum_probs=67.5
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHh-cCC------CcEEEEeCCCC--------------------CCceeeecCCCCCCC
Q 025071 112 FLFNESKALSIGARVGQEVAALKL-VGV------SDSIGIDLVPR--------------------PPLVIKGDFHAQPFD 164 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~-~g~------~~v~GvD~s~~--------------------~~~~~~aDa~~LPf~ 164 (258)
.+.++.+|||||||+|..+..+++ .+. .+|+|+|+++. ...+..+|+.. +++
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~ 159 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYP 159 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCG
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCC
Confidence 356788999999999999988876 332 37999998642 22456778776 666
Q ss_pred C-CCeeEEEec-cccccCChHHHHHHHHhcccCCcEEEEEec
Q 025071 165 N-GTFDFEFSN-VFDHALYPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 165 d-~SFD~V~s~-~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
+ ++||+|+++ .++|+. +++.++|||||++++.+.
T Consensus 160 ~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 160 PNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp GGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred cCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEe
Confidence 5 899999996 666654 789999999999999875
No 196
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.17 E-value=4.2e-11 Score=103.67 Aligned_cols=99 Identities=14% Similarity=0.070 Sum_probs=69.9
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC-----------------CCceeeecCCCC-
Q 025071 102 RFFQDLKQRHFLFNESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR-----------------PPLVIKGDFHAQ- 161 (258)
Q Consensus 102 ~~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~-----------------~~~~~~aDa~~L- 161 (258)
.++..+.......++.+|||||||+|..+..|++. + ..+|+++|+++. ...++++|+.++
T Consensus 43 ~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l 122 (221)
T 3dr5_A 43 QLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVM 122 (221)
T ss_dssp HHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHG
T ss_pred HHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHH
Confidence 34444544333334459999999999999998873 2 358999998642 124567776553
Q ss_pred C-CCCCCeeEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 162 P-FDNGTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 162 P-f~d~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+ +++++||+|++..- ..+...+++++.|+|||||++++.
T Consensus 123 ~~~~~~~fD~V~~d~~--~~~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 123 SRLANDSYQLVFGQVS--PMDLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp GGSCTTCEEEEEECCC--TTTHHHHHHHHHHHEEEEEEEEET
T ss_pred HHhcCCCcCeEEEcCc--HHHHHHHHHHHHHHcCCCcEEEEe
Confidence 2 44789999998521 224567899999999999999983
No 197
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.15 E-value=3.2e-11 Score=102.02 Aligned_cols=85 Identities=13% Similarity=0.069 Sum_probs=65.8
Q ss_pred CCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC----------------CCceeeecCCC-CCCCCCCeeEEEecc
Q 025071 115 NESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR----------------PPLVIKGDFHA-QPFDNGTFDFEFSNV 175 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~----------------~~~~~~aDa~~-LPf~d~SFD~V~s~~ 175 (258)
++.+|||||||+|..+..+++. + ..+|+|+|+++. ...++.+|+.+ +|..++ ||+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 5679999999999999999875 2 358999998742 12367778765 366567 99999852
Q ss_pred ccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 176 FDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 176 l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
...+...+++++.|+|||||++++.
T Consensus 135 --~~~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 135 --DVFNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp --TTSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred --ChhhhHHHHHHHHHhcCCCeEEEEE
Confidence 2345678899999999999999874
No 198
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.14 E-value=1e-09 Score=102.00 Aligned_cols=132 Identities=18% Similarity=0.194 Sum_probs=86.4
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc--CCCcEEEEeCCCCCC------ceeeecCCCCCCCCCCeeEEEec--c--ccc---
Q 025071 114 FNESKALSIGARVGQEVAALKLV--GVSDSIGIDLVPRPP------LVIKGDFHAQPFDNGTFDFEFSN--V--FDH--- 178 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~--g~~~v~GvD~s~~~~------~~~~aDa~~LPf~d~SFD~V~s~--~--l~h--- 178 (258)
.++.+|||+|||+|..+..+++. +..+++|+|+++... .+.++|+...+. +++||+|++| . ..+
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a~~~~~~~~D~~~~~~-~~~fD~Ii~NPPy~~~~~~~~ 116 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWAEGILADFLLWEP-GEAFDLILGNPPYGIVGEASK 116 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCCTTEEEEESCGGGCCC-SSCEEEEEECCCCCCBSCTTT
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhCCCCcEEeCChhhcCc-cCCCCEEEECcCccCcccccc
Confidence 35679999999999999888763 345899999986542 467888877653 5789999996 1 111
Q ss_pred ----cCCh-------------------HHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEe
Q 025071 179 ----ALYP-------------------WKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAV 235 (258)
Q Consensus 179 ----~~~p-------------------~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v 235 (258)
+.+. ..+++++.++|||||++++.++.... . . -..+.+.+++.+.+...+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l----~-~--~~~~~lr~~l~~~~~~~i 189 (421)
T 2ih2_A 117 YPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWL----V-L--EDFALLREFLAREGKTSV 189 (421)
T ss_dssp CSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGG----T-C--GGGHHHHHHHHHHSEEEE
T ss_pred cccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHh----c-C--ccHHHHHHHHHhcCCeEE
Confidence 1111 14578999999999999998874210 0 1 124667777766655433
Q ss_pred eee----cCCCCeE-EEEEEeCC
Q 025071 236 RKV----DGFGLDT-EVVFRKKK 253 (258)
Q Consensus 236 ~~v----~g~~l~~-~~~f~K~~ 253 (258)
..+ .+-...+ .++++|.+
T Consensus 190 ~~l~~~F~~~~~~~~il~~~k~~ 212 (421)
T 2ih2_A 190 YYLGEVFPQKKVSAVVIRFQKSG 212 (421)
T ss_dssp EEEESCSTTCCCCEEEEEEESSS
T ss_pred EECCCCCCCCCccEEEEEEEeCC
Confidence 332 2223333 56677743
No 199
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.13 E-value=1.9e-10 Score=103.95 Aligned_cols=115 Identities=15% Similarity=0.136 Sum_probs=77.7
Q ss_pred CEEEEECCCC--CHHHHHHHh--cCCCcEEEEeCCCC---------------CCceeeecCCCCC------CCCCCee--
Q 025071 117 SKALSIGARV--GQEVAALKL--VGVSDSIGIDLVPR---------------PPLVIKGDFHAQP------FDNGTFD-- 169 (258)
Q Consensus 117 ~~VLDIGcGt--G~~~~~L~~--~g~~~v~GvD~s~~---------------~~~~~~aDa~~LP------f~d~SFD-- 169 (258)
.+|||||||+ +.++..+++ .+..+|+|+|.++. ...++++|+.+++ ..+++||
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~ 159 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLT 159 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcC
Confidence 5899999997 333444332 23458999998641 1247889988763 2246676
Q ss_pred ---EEEec-cccccCC---hHHHHHHHHhcccCCcEEEEEeccccCc--------CcC----CCCCCCChhHHHHHhhcC
Q 025071 170 ---FEFSN-VFDHALY---PWKFVGEIERTLKPAGVCVLHVALSRRA--------DKY----SANDLFSVKPLVKLFRES 230 (258)
Q Consensus 170 ---~V~s~-~l~h~~~---p~~~l~Ei~RVLKPGG~lii~v~~~~~~--------~~y----~~~~~~s~~~l~~lf~~~ 230 (258)
.|+++ +|||+.+ |..+++++.++|+|||++++........ ..| ....+++.+++.++|...
T Consensus 160 ~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g~p~~~rs~~ei~~~f~Gl 239 (277)
T 3giw_A 160 RPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNMPMRLRTHAEAEEFFEGL 239 (277)
T ss_dssp SCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTTCCCCCCCHHHHHHTTTTS
T ss_pred CcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcCCCCccCCHHHHHHHhCCC
Confidence 46664 7888887 5789999999999999999974332110 011 112457899999999755
Q ss_pred c
Q 025071 231 E 231 (258)
Q Consensus 231 ~ 231 (258)
+
T Consensus 240 e 240 (277)
T 3giw_A 240 E 240 (277)
T ss_dssp E
T ss_pred c
Confidence 4
No 200
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.12 E-value=6.4e-11 Score=101.69 Aligned_cols=86 Identities=16% Similarity=0.188 Sum_probs=67.1
Q ss_pred CCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC----------------CCceeeecCCCC-CCC--CCCeeEEEec
Q 025071 115 NESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR----------------PPLVIKGDFHAQ-PFD--NGTFDFEFSN 174 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~----------------~~~~~~aDa~~L-Pf~--d~SFD~V~s~ 174 (258)
++.+|||+|||+|..+..+++. +..+|+|+|+++. ...+..+|+... |.. +++||+|+++
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 6779999999999999998875 2358999998641 134667787663 544 6899999985
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
... .+...+++++.++|||||++++.
T Consensus 134 ~~~--~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 134 AAK--GQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp GGG--SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCH--HHHHHHHHHHHHHcCCCeEEEEE
Confidence 322 26778999999999999999885
No 201
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.12 E-value=2.1e-10 Score=104.31 Aligned_cols=92 Identities=13% Similarity=0.043 Sum_probs=69.2
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhc--CCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEec
Q 025071 112 FLFNESKALSIGARVGQEVAALKLV--GVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSN 174 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~--g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~ 174 (258)
...++.+|||+|||+|..+..+++. +...|+|+|+++. ...++++|+..++..+++||.|+++
T Consensus 115 ~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d 194 (315)
T 1ixk_A 115 DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLD 194 (315)
T ss_dssp CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEe
Confidence 3567889999999999999988864 2357999998742 2246778988887767899999984
Q ss_pred -------cccccCC------h----------HHHHHHHHhcccCCcEEEEEe
Q 025071 175 -------VFDHALY------P----------WKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 175 -------~l~h~~~------p----------~~~l~Ei~RVLKPGG~lii~v 203 (258)
++.+.++ + ..+++++.|+|||||++++.+
T Consensus 195 ~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st 246 (315)
T 1ixk_A 195 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST 246 (315)
T ss_dssp CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 2332211 1 478899999999999998854
No 202
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.11 E-value=1.2e-10 Score=98.98 Aligned_cols=86 Identities=15% Similarity=0.096 Sum_probs=63.6
Q ss_pred CCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC----------------CCceeeecCCCC-C-CC---CCCeeEE
Q 025071 115 NESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR----------------PPLVIKGDFHAQ-P-FD---NGTFDFE 171 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~----------------~~~~~~aDa~~L-P-f~---d~SFD~V 171 (258)
++.+|||||||+|..+..+++. + ..+|+|+|+++. ...++++|+.+. | +. +++||+|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 5789999999999999999875 2 248999998641 134677777542 2 11 2679999
Q ss_pred EeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 172 FSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 172 ~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
++... ......+++++.|+|||||++++.
T Consensus 138 ~~d~~--~~~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 138 FIDAD--KQNNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp EECSC--GGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred EEcCC--cHHHHHHHHHHHHhcCCCcEEEEe
Confidence 98532 223467889999999999988875
No 203
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.11 E-value=1e-10 Score=104.68 Aligned_cols=90 Identities=17% Similarity=0.145 Sum_probs=69.1
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC-------------------CCceeeecCCC-CCCCCCCeeEEE
Q 025071 114 FNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR-------------------PPLVIKGDFHA-QPFDNGTFDFEF 172 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~-------------------~~~~~~aDa~~-LPf~d~SFD~V~ 172 (258)
.++.+|||||||+|..+.++.+. +..+|+++|+++. ...++.+|+.+ ++..+++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 35689999999999999998876 5678999998631 12467778765 455578999999
Q ss_pred eccccccCC-----hHHHHHHHHhcccCCcEEEEEe
Q 025071 173 SNVFDHALY-----PWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 173 s~~l~h~~~-----p~~~l~Ei~RVLKPGG~lii~v 203 (258)
++...+... ...+++++.|+|||||++++..
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 974443221 2578999999999999999874
No 204
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.09 E-value=9.3e-11 Score=106.76 Aligned_cols=90 Identities=16% Similarity=0.225 Sum_probs=69.3
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC--------------------CCceeeecCCC-CCCCCCCeeEE
Q 025071 114 FNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR--------------------PPLVIKGDFHA-QPFDNGTFDFE 171 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~--------------------~~~~~~aDa~~-LPf~d~SFD~V 171 (258)
.++.+|||||||+|..+..+++. +..+|+++|+++. ...++.+|+.+ ++..+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 45689999999999999999876 4568999998631 12356777765 45567899999
Q ss_pred EeccccccC--C------hHHHHHHHHhcccCCcEEEEEe
Q 025071 172 FSNVFDHAL--Y------PWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 172 ~s~~l~h~~--~------p~~~l~Ei~RVLKPGG~lii~v 203 (258)
+++...|.. . ...+++++.|+|||||++++..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 997544440 1 3678999999999999999874
No 205
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.09 E-value=1.2e-10 Score=105.14 Aligned_cols=90 Identities=19% Similarity=0.117 Sum_probs=67.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC-------------------CCceeeecCCC-CCCCCCCeeEEE
Q 025071 114 FNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR-------------------PPLVIKGDFHA-QPFDNGTFDFEF 172 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~-------------------~~~~~~aDa~~-LPf~d~SFD~V~ 172 (258)
.++.+|||||||+|..+..+++. +..+|+++|+++. ...++++|+.+ ++..+++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 35689999999999999999876 5568999998631 12356777654 455678999999
Q ss_pred eccccc-cC-----ChHHHHHHHHhcccCCcEEEEEe
Q 025071 173 SNVFDH-AL-----YPWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 173 s~~l~h-~~-----~p~~~l~Ei~RVLKPGG~lii~v 203 (258)
++..++ .. ....+++++.|+|||||++++..
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 864433 21 22678899999999999999974
No 206
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.09 E-value=1e-10 Score=107.61 Aligned_cols=88 Identities=17% Similarity=0.191 Sum_probs=67.6
Q ss_pred CEEEEECCCCCHHHHHHHh-cCCCcEEEEeCCCC---------------CCceeeecCCCC--CCCCCCeeEEEeccccc
Q 025071 117 SKALSIGARVGQEVAALKL-VGVSDSIGIDLVPR---------------PPLVIKGDFHAQ--PFDNGTFDFEFSNVFDH 178 (258)
Q Consensus 117 ~~VLDIGcGtG~~~~~L~~-~g~~~v~GvD~s~~---------------~~~~~~aDa~~L--Pf~d~SFD~V~s~~l~h 178 (258)
.+|||||||+|..+.++++ .+..+|++||+++. ...++.+|+.+. .+++++||+|+++.+.+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 3999999999999999987 44348999998641 124677887654 35678999999975444
Q ss_pred cC-----ChHHHHHHHHhcccCCcEEEEEec
Q 025071 179 AL-----YPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 179 ~~-----~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
.. ....++++++|+|||||++++...
T Consensus 171 ~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 32 226789999999999999998764
No 207
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.08 E-value=2e-10 Score=102.25 Aligned_cols=89 Identities=17% Similarity=0.095 Sum_probs=70.6
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEecc
Q 025071 112 FLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSNV 175 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~~ 175 (258)
.+.++.+|||+|||+|..+..+++. +...|+|+|+++. ...++++|+.++|. +++||+|+++.
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~ 194 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGY 194 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECC
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECC
Confidence 3667889999999999999998876 3458999998742 12478899988855 77999999862
Q ss_pred ccccCChHHHHHHHHhcccCCcEEEEEec
Q 025071 176 FDHALYPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 176 l~h~~~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
.. ....++.++.|+|||||++++...
T Consensus 195 p~---~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 195 VH---KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp CS---SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred cc---cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 21 456788999999999999988643
No 208
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.08 E-value=8e-10 Score=102.74 Aligned_cols=118 Identities=20% Similarity=0.214 Sum_probs=84.2
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCC-CcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEec-
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGV-SDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSN- 174 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~-~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~- 174 (258)
..++.+|||+|||+|..+..++..+. .+|+|+|+++. ...+.++|+.++|+++++||+|+++
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 56788999999999999999988763 37999998742 2357899999999999999999996
Q ss_pred cccc-------cCC-hHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEe--eeecCCCCe
Q 025071 175 VFDH-------ALY-PWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAV--RKVDGFGLD 244 (258)
Q Consensus 175 ~l~h-------~~~-p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v--~~v~g~~l~ 244 (258)
-+.. ..+ ...+++++.|+| ||.+++.++ +.+.+.+.+.+.|+... ..+..-+++
T Consensus 295 Pyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~--------------~~~~~~~~~~~~G~~~~~~~~~~nG~l~ 358 (373)
T 3tm4_A 295 PYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT--------------EKKAIEEAIAENGFEIIHHRVIGHGGLM 358 (373)
T ss_dssp CCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES--------------CHHHHHHHHHHTTEEEEEEEEEEETTEE
T ss_pred CCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC--------------CHHHHHHHHHHcCCEEEEEEEEEcCCEE
Confidence 2211 111 145778999999 555555443 34667788888886543 344333665
Q ss_pred EE
Q 025071 245 TE 246 (258)
Q Consensus 245 ~~ 246 (258)
+.
T Consensus 359 ~~ 360 (373)
T 3tm4_A 359 VH 360 (373)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 209
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.08 E-value=8.1e-11 Score=105.69 Aligned_cols=93 Identities=19% Similarity=0.226 Sum_probs=65.8
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCC
Q 025071 104 FQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGT 167 (258)
Q Consensus 104 ~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~S 167 (258)
.+.+++...+.++.+|||||||+|..+..|++.+. +|+|+|+++. ...++++|+.+++++ +
T Consensus 17 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~ 93 (285)
T 1zq9_A 17 INSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--F 93 (285)
T ss_dssp HHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--C
T ss_pred HHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--h
Confidence 33444444456788999999999999999988764 8999998641 124688999988876 7
Q ss_pred eeEEEecc------------ccccCChHHHH----HHHH--hcccCCcEE
Q 025071 168 FDFEFSNV------------FDHALYPWKFV----GEIE--RTLKPAGVC 199 (258)
Q Consensus 168 FD~V~s~~------------l~h~~~p~~~l----~Ei~--RVLKPGG~l 199 (258)
||.|+++. ++|..++..++ +|+. |+|||||.+
T Consensus 94 fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~ 143 (285)
T 1zq9_A 94 FDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKL 143 (285)
T ss_dssp CSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTT
T ss_pred hcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcc
Confidence 99999962 23332222111 4554 799999965
No 210
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.07 E-value=3.6e-10 Score=100.48 Aligned_cols=91 Identities=15% Similarity=0.146 Sum_probs=69.3
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhc--CCCcEEEEeCCCC---------------CCceeeecCCCCCC----CCCCeeEE
Q 025071 113 LFNESKALSIGARVGQEVAALKLV--GVSDSIGIDLVPR---------------PPLVIKGDFHAQPF----DNGTFDFE 171 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~--g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf----~d~SFD~V 171 (258)
..++.+|||+|||+|..+..+++. +...|+|+|+++. ...++++|+..++. .+++||.|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 467889999999999999888863 3358999998742 22467788877765 37899999
Q ss_pred Eecc-------cc------------ccCChHHHHHHHHhcccCCcEEEEEe
Q 025071 172 FSNV-------FD------------HALYPWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 172 ~s~~-------l~------------h~~~p~~~l~Ei~RVLKPGG~lii~v 203 (258)
+++. +. .......+++++.++|||||++++.+
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st 211 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST 211 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 9851 11 11345778999999999999998865
No 211
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.07 E-value=3.3e-11 Score=103.94 Aligned_cols=100 Identities=9% Similarity=-0.040 Sum_probs=71.7
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCCC-------------C-ceeeecCCCCCCC
Q 025071 100 FSRFFQDLKQRHFLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPRP-------------P-LVIKGDFHAQPFD 164 (258)
Q Consensus 100 ~~~~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~~-------------~-~~~~aDa~~LPf~ 164 (258)
+..+|..+.+ .+.++.+|||+|||+|..+..++.. +..+++|+|+++.. . .+..+|.... .+
T Consensus 36 ld~fY~~~~~--~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~ 112 (200)
T 3fzg_A 36 LNDFYTYVFG--NIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VY 112 (200)
T ss_dssp HHHHHHHHHH--HSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HT
T ss_pred HHHHHHHHHh--hcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CC
Confidence 3444444433 2466889999999999999988754 33489999997521 1 2444555443 46
Q ss_pred CCCeeEEEec-cccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 165 NGTFDFEFSN-VFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 165 d~SFD~V~s~-~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
.++||+|++. .+||+.+.+.++.++.+.|||||.++-.
T Consensus 113 ~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 113 KGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp TSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEE
T ss_pred CCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEe
Confidence 6889999994 7888866666778999999999877553
No 212
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.07 E-value=3.5e-10 Score=104.34 Aligned_cols=91 Identities=20% Similarity=0.227 Sum_probs=68.2
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC-------------------CCceeeecCCCC--CCCCCCeeE
Q 025071 113 LFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR-------------------PPLVIKGDFHAQ--PFDNGTFDF 170 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~-------------------~~~~~~aDa~~L--Pf~d~SFD~ 170 (258)
..++.+|||||||+|..+..+++. +..+|+++|+++. ...++++|+.+. .+++++||+
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 346789999999999999999875 3468999998641 124677787653 245789999
Q ss_pred EEeccccccC-----ChHHHHHHHHhcccCCcEEEEEe
Q 025071 171 EFSNVFDHAL-----YPWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 171 V~s~~l~h~~-----~p~~~l~Ei~RVLKPGG~lii~v 203 (258)
|+++..++.. ....+++++.|+|||||++++..
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 9996432211 13678999999999999999964
No 213
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.07 E-value=8.4e-12 Score=109.10 Aligned_cols=95 Identities=18% Similarity=0.154 Sum_probs=69.7
Q ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCC-------------CceeeecCCCCCCCC-CCeeEEEe
Q 025071 108 KQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRP-------------PLVIKGDFHAQPFDN-GTFDFEFS 173 (258)
Q Consensus 108 ~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~-------------~~~~~aDa~~LPf~d-~SFD~V~s 173 (258)
++...+.++.+|||+|||+|..+..|++.+ .+|+|+|+++.. ..++++|+.++|+++ ++| .|++
T Consensus 22 ~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~ 99 (245)
T 1yub_A 22 IKQLNLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVG 99 (245)
T ss_dssp HHHCCCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEE
T ss_pred HHhcCCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEE
Confidence 333345677899999999999999998877 589999987531 236789999999884 789 5665
Q ss_pred cc------------ccccCChHHHH----HHHHhcccCCcEEEEEec
Q 025071 174 NV------------FDHALYPWKFV----GEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 174 ~~------------l~h~~~p~~~l----~Ei~RVLKPGG~lii~v~ 204 (258)
+- +.|...+..++ +++.|+|||||.+++.+.
T Consensus 100 n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 100 NIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp ECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred eCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 41 23333444455 679999999998777543
No 214
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.06 E-value=1.6e-10 Score=105.83 Aligned_cols=91 Identities=20% Similarity=0.186 Sum_probs=68.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC-------------------CCceeeecCCC-CCCCCCCeeEEE
Q 025071 114 FNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR-------------------PPLVIKGDFHA-QPFDNGTFDFEF 172 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~-------------------~~~~~~aDa~~-LPf~d~SFD~V~ 172 (258)
.++.+|||||||+|..+..+++. +..+|+++|+++. ...++++|+.+ ++..+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 45689999999999999999876 4568999998631 12356777654 344578999999
Q ss_pred eccccccC-----ChHHHHHHHHhcccCCcEEEEEec
Q 025071 173 SNVFDHAL-----YPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 173 s~~l~h~~-----~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
++..++.. ....+++++.|+|||||++++...
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 96433321 116789999999999999999753
No 215
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.06 E-value=1.4e-10 Score=103.80 Aligned_cols=89 Identities=19% Similarity=0.179 Sum_probs=66.3
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-------------------------CCceeeecCCC-CCCCCCC
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-------------------------PPLVIKGDFHA-QPFDNGT 167 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-------------------------~~~~~~aDa~~-LPf~d~S 167 (258)
.++.+|||||||+|..+..+++.+..+|+++|+++. ...++.+|+.+ ++. +++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 456899999999999999998776668999998631 11355666643 233 689
Q ss_pred eeEEEeccccccCC-----hHHHHHHHHhcccCCcEEEEEe
Q 025071 168 FDFEFSNVFDHALY-----PWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 168 FD~V~s~~l~h~~~-----p~~~l~Ei~RVLKPGG~lii~v 203 (258)
||+|+++..++... ...+++++.|+|||||++++..
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99999964433211 2568899999999999999874
No 216
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.05 E-value=2.1e-10 Score=100.77 Aligned_cols=86 Identities=17% Similarity=0.203 Sum_probs=65.6
Q ss_pred CCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC----------------CCceeeecCCC-CCC------CCCCee
Q 025071 115 NESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR----------------PPLVIKGDFHA-QPF------DNGTFD 169 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~----------------~~~~~~aDa~~-LPf------~d~SFD 169 (258)
++.+|||||||+|..+..+++. + ..+|+++|+++. ...++.+|+.+ +|. ++++||
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 5679999999999999988864 2 358999999752 12366777754 342 268999
Q ss_pred EEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 170 FEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 170 ~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+|++.+- ..+...+++++.|+|||||++++.
T Consensus 159 ~V~~d~~--~~~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 159 FIFVDAD--KDNYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp EEEECSC--STTHHHHHHHHHHHBCTTCCEEEE
T ss_pred EEEEcCc--hHHHHHHHHHHHHhCCCCeEEEEe
Confidence 9998532 235678899999999999999875
No 217
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.05 E-value=1.5e-10 Score=105.16 Aligned_cols=90 Identities=18% Similarity=0.153 Sum_probs=66.8
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCC-------------------CCceeeecCCC-CCCCCCCeeEEE
Q 025071 114 FNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPR-------------------PPLVIKGDFHA-QPFDNGTFDFEF 172 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~-------------------~~~~~~aDa~~-LPf~d~SFD~V~ 172 (258)
.++.+|||||||+|..+..+++.+ ..+|+++|+++. ...++.+|+.+ ++..+++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 467899999999999999998763 468999998631 12356777765 455678999999
Q ss_pred eccccccC-----ChHHHHHHHHhcccCCcEEEEEe
Q 025071 173 SNVFDHAL-----YPWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 173 s~~l~h~~-----~p~~~l~Ei~RVLKPGG~lii~v 203 (258)
++...+.. ....+++++.|+|||||++++..
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 96443322 12467899999999999999875
No 218
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.04 E-value=2e-09 Score=98.54 Aligned_cols=133 Identities=12% Similarity=0.084 Sum_probs=86.9
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCC------CcEEEEeCCCC--------------CCceeeecCCCCCCCCCCeeEEEe
Q 025071 114 FNESKALSIGARVGQEVAALKLVGV------SDSIGIDLVPR--------------PPLVIKGDFHAQPFDNGTFDFEFS 173 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~------~~v~GvD~s~~--------------~~~~~~aDa~~LPf~d~SFD~V~s 173 (258)
.++.+|||+|||+|..+..+++... ..++|+|+++. ...+.++|+.. +..+++||+|++
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~-~~~~~~fD~Ii~ 207 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLA-NLLVDPVDVVIS 207 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTS-CCCCCCEEEEEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCC-ccccCCccEEEE
Confidence 3567999999999999887765321 47999998742 23467788765 445689999999
Q ss_pred c-cccccCCh------------------HHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEE
Q 025071 174 N-VFDHALYP------------------WKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVA 234 (258)
Q Consensus 174 ~-~l~h~~~p------------------~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~ 234 (258)
+ -+.++... ..+++++.+.|||||++++.++.. -+.. -...++.+++.+.+.+.
T Consensus 208 NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~----~~~~---~~~~~ir~~l~~~~~~~ 280 (344)
T 2f8l_A 208 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA----MFGT---SDFAKVDKFIKKNGHIE 280 (344)
T ss_dssp ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG----GGGS---TTHHHHHHHHHHHEEEE
T ss_pred CCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch----hcCC---chHHHHHHHHHhCCeEE
Confidence 7 44343222 157899999999999999987632 1111 12477888887766543
Q ss_pred -eeee--c---CCCCe-EEEEEEeCCc
Q 025071 235 -VRKV--D---GFGLD-TEVVFRKKKK 254 (258)
Q Consensus 235 -v~~v--~---g~~l~-~~~~f~K~~~ 254 (258)
+..+ + +.+.. ..++++|+..
T Consensus 281 ~ii~lp~~~F~~~~~~~~i~vl~k~~~ 307 (344)
T 2f8l_A 281 GIIKLPETLFKSEQARKSILILEKADV 307 (344)
T ss_dssp EEEECCGGGSCC-CCCEEEEEEEECCT
T ss_pred EeeeCChhhccCCCCceEEEEEECCCC
Confidence 2222 1 22233 3667777543
No 219
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.03 E-value=1.7e-10 Score=105.48 Aligned_cols=90 Identities=14% Similarity=0.080 Sum_probs=65.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC-------------------CCceeeecCCC-CCCCCCCeeEEE
Q 025071 114 FNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR-------------------PPLVIKGDFHA-QPFDNGTFDFEF 172 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~-------------------~~~~~~aDa~~-LPf~d~SFD~V~ 172 (258)
.++.+|||||||+|..+..+++. +..+|+++|+++. ...++.+|+.+ ++..+++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 45689999999999999999875 3468999998631 12356677654 444678999999
Q ss_pred eccccccCCh-----HHHHHHHHhcccCCcEEEEEe
Q 025071 173 SNVFDHALYP-----WKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 173 s~~l~h~~~p-----~~~l~Ei~RVLKPGG~lii~v 203 (258)
++..++...+ ..+++++.|+|||||++++..
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 9755443211 578899999999999999864
No 220
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.03 E-value=4.5e-10 Score=100.07 Aligned_cols=82 Identities=12% Similarity=-0.021 Sum_probs=65.9
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-------------------CCceeeecCCCCCCCCCCeeEEEec
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-------------------PPLVIKGDFHAQPFDNGTFDFEFSN 174 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-------------------~~~~~~aDa~~LPf~d~SFD~V~s~ 174 (258)
.++.+|||||||+|..+..+.+.+ .+|+++|+++. ...++.+|+.+.. ++||+|+++
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 456899999999999999887767 78999998631 1235667877655 789999986
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEEe
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~v 203 (258)
. .+|..+++++.|+|||||++++..
T Consensus 147 ~----~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 147 Q----EPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp S----CCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred C----CChHHHHHHHHHhcCCCcEEEEEc
Confidence 2 467778999999999999999864
No 221
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.02 E-value=4.1e-09 Score=88.32 Aligned_cols=104 Identities=17% Similarity=0.137 Sum_probs=73.4
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------------CCceeeecCCCCCCCCCCeeEEEec-ccc
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------------PPLVIKGDFHAQPFDNGTFDFEFSN-VFD 177 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~ 177 (258)
..++.+|||+|||+|..+..+++.|...|+|+|+++. ...++++|+.++| ++||+|+++ .++
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFG 123 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCS
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCc
Confidence 3467899999999999999998887667999998742 2346788988875 589999997 333
Q ss_pred ccC--ChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCce
Q 025071 178 HAL--YPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESEL 232 (258)
Q Consensus 178 h~~--~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~ 232 (258)
+.. ....+++++.++| ||.+++.++... +.+.+.+.+.+.|+
T Consensus 124 ~~~~~~~~~~l~~~~~~l--~~~~~~~~~~~~-----------~~~~~~~~l~~~g~ 167 (207)
T 1wy7_A 124 SQRKHADRPFLLKAFEIS--DVVYSIHLAKPE-----------VRRFIEKFSWEHGF 167 (207)
T ss_dssp SSSTTTTHHHHHHHHHHC--SEEEEEEECCHH-----------HHHHHHHHHHHTTE
T ss_pred cccCCchHHHHHHHHHhc--CcEEEEEeCCcC-----------CHHHHHHHHHHCCC
Confidence 322 2356789999999 665544432110 23556677777764
No 222
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.02 E-value=2.3e-10 Score=99.49 Aligned_cols=123 Identities=15% Similarity=0.100 Sum_probs=75.7
Q ss_pred CCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC----------------CCceeeecCCCC---CCC---CCCeeEE
Q 025071 115 NESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR----------------PPLVIKGDFHAQ---PFD---NGTFDFE 171 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~----------------~~~~~~aDa~~L---Pf~---d~SFD~V 171 (258)
++.+|||+|||+|..+..+++. +..+|+|+|+++. ...++++|+.+. +++ +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 5679999999999988887754 2258999998742 135678887652 565 3799999
Q ss_pred Eec-cccccC--------------Ch-HHHHHHHHhcccCCcEEEEEecccc------CcCcC---CCCCCCChhHHHHH
Q 025071 172 FSN-VFDHAL--------------YP-WKFVGEIERTLKPAGVCVLHVALSR------RADKY---SANDLFSVKPLVKL 226 (258)
Q Consensus 172 ~s~-~l~h~~--------------~p-~~~l~Ei~RVLKPGG~lii~v~~~~------~~~~y---~~~~~~s~~~l~~l 226 (258)
+++ -+.+.. .| ...+.+++|+|||||.+.+...... ....+ ......+.+++.++
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 224 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEE 224 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHHH
Confidence 997 222111 12 2346899999999997765421100 00111 11122345789999
Q ss_pred hhcCceEEeee
Q 025071 227 FRESELVAVRK 237 (258)
Q Consensus 227 f~~~~~~~v~~ 237 (258)
+++.|+..+..
T Consensus 225 l~~~Gf~~v~~ 235 (254)
T 2h00_A 225 LRIQGVPKVTY 235 (254)
T ss_dssp HHHTTCSEEEE
T ss_pred HHHcCCCceEE
Confidence 99999866553
No 223
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.02 E-value=2.6e-10 Score=102.25 Aligned_cols=90 Identities=20% Similarity=0.152 Sum_probs=67.4
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCC-------------------CCceeeecCCC-CCCCCCCeeEEE
Q 025071 114 FNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPR-------------------PPLVIKGDFHA-QPFDNGTFDFEF 172 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~-------------------~~~~~~aDa~~-LPf~d~SFD~V~ 172 (258)
.++.+|||||||+|..+..+++.. ..+|+++|+++. ...++.+|+.+ ++..+++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 467899999999999999998763 468999998631 12356777654 333478999999
Q ss_pred eccccccCC-----hHHHHHHHHhcccCCcEEEEEe
Q 025071 173 SNVFDHALY-----PWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 173 s~~l~h~~~-----p~~~l~Ei~RVLKPGG~lii~v 203 (258)
++..++... ...+++++.|+|||||++++..
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 964333211 1578999999999999999874
No 224
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.01 E-value=1.6e-10 Score=106.28 Aligned_cols=90 Identities=16% Similarity=0.090 Sum_probs=68.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-----------------CCceeeecCCCCCC----CCCCeeEEE
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-----------------PPLVIKGDFHAQPF----DNGTFDFEF 172 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-----------------~~~~~~aDa~~LPf----~d~SFD~V~ 172 (258)
.++.+|||+|||+|..+..+++.|. .|+|+|+++. ...++++|+.++.. .+++||+|+
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 3567999999999999999988886 8999998742 13467778765432 167999999
Q ss_pred ec--ccc---------ccCChHHHHHHHHhcccCCcEEEEEec
Q 025071 173 SN--VFD---------HALYPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 173 s~--~l~---------h~~~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
++ .+. +..+...+++++.++|||||.+++...
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 95 111 222456788999999999999877654
No 225
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.00 E-value=2.9e-10 Score=98.19 Aligned_cols=86 Identities=15% Similarity=0.159 Sum_probs=64.1
Q ss_pred CCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC----------------CCceeeecCCC-CC-------------
Q 025071 115 NESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR----------------PPLVIKGDFHA-QP------------- 162 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~----------------~~~~~~aDa~~-LP------------- 162 (258)
++.+|||||||+|..+..+++. + ..+|+|+|+++. ...+..+|+.+ +|
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 5789999999999999998875 2 358999998642 12356666543 22
Q ss_pred -CCC--CCeeEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 163 -FDN--GTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 163 -f~d--~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
|++ ++||+|+++.- ..+...+++++.++|||||++++.
T Consensus 140 ~f~~~~~~fD~I~~~~~--~~~~~~~l~~~~~~L~pgG~lv~~ 180 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDAD--KENYPNYYPLILKLLKPGGLLIAD 180 (239)
T ss_dssp TTCCSTTCEEEEEECSC--GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCCCCCcCEEEEeCC--HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 444 89999998521 223457889999999999999986
No 226
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.99 E-value=3.7e-10 Score=97.65 Aligned_cols=86 Identities=19% Similarity=0.139 Sum_probs=65.1
Q ss_pred CCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC----------------CCceeeecCC----CCCCCC--CCeeE
Q 025071 115 NESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR----------------PPLVIKGDFH----AQPFDN--GTFDF 170 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~----------------~~~~~~aDa~----~LPf~d--~SFD~ 170 (258)
++.+|||||||+|..+..+++. + ..+++|+|+++. ...+..+|+. .+++++ ++||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 5679999999999999999874 2 248999998742 1235667753 345555 89999
Q ss_pred EEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 171 EFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 171 V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
|++... ..+...+++++.|+|||||++++.
T Consensus 152 V~~d~~--~~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 152 IFIDAD--KRNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp EEECSC--GGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEECCC--HHHHHHHHHHHHHHcCCCeEEEEe
Confidence 998532 234567899999999999999885
No 227
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.99 E-value=1e-09 Score=101.85 Aligned_cols=89 Identities=19% Similarity=0.161 Sum_probs=67.9
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCC-CcEEEEeCCCC---------------CCceeeecCCC-CCC-CCCCeeEEEecc
Q 025071 114 FNESKALSIGARVGQEVAALKLVGV-SDSIGIDLVPR---------------PPLVIKGDFHA-QPF-DNGTFDFEFSNV 175 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~-~~v~GvD~s~~---------------~~~~~~aDa~~-LPf-~d~SFD~V~s~~ 175 (258)
.++.+|||+| |+|..+..++..+. .+|+|+|+++. ...++++|+.+ +|. .+++||+|+++.
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 3578999999 99999999987764 68999998742 23578899988 885 567999999973
Q ss_pred ccccCChHHHHHHHHhcccCCcEE-EEEe
Q 025071 176 FDHALYPWKFVGEIERTLKPAGVC-VLHV 203 (258)
Q Consensus 176 l~h~~~p~~~l~Ei~RVLKPGG~l-ii~v 203 (258)
..+......+++++.|+|||||++ ++.+
T Consensus 250 p~~~~~~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 250 PETLEAIRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp CSSHHHHHHHHHHHHHTBCSTTCEEEEEE
T ss_pred CCchHHHHHHHHHHHHHcccCCeEEEEEE
Confidence 222222467889999999999954 4443
No 228
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.99 E-value=1.8e-09 Score=102.03 Aligned_cols=91 Identities=19% Similarity=0.174 Sum_probs=71.1
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCCC--------------CceeeecCCCCC--CCCCCeeEEEec-
Q 025071 113 LFNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPRP--------------PLVIKGDFHAQP--FDNGTFDFEFSN- 174 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~~--------------~~~~~aDa~~LP--f~d~SFD~V~s~- 174 (258)
..++.+|||+|||+|..+..+++.+ ...|+|+|+++.. ..+.++|+..++ +++++||.|+++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 4678899999999999999888754 2589999997642 346788988887 777899999963
Q ss_pred ------cccccCCh----------------HHHHHHHHhcccCCcEEEEEe
Q 025071 175 ------VFDHALYP----------------WKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 175 ------~l~h~~~p----------------~~~l~Ei~RVLKPGG~lii~v 203 (258)
.+.+.++. ..+++++.++|||||++++.+
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 34443332 367899999999999998864
No 229
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.97 E-value=1.6e-09 Score=95.34 Aligned_cols=112 Identities=13% Similarity=0.009 Sum_probs=82.6
Q ss_pred cCCCCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEe
Q 025071 111 HFLFNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFS 173 (258)
Q Consensus 111 ~~l~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s 173 (258)
..+.++.+|||||||+|..+.+++..| ...|+|+|+++. ...+..+|..+.+.+++.||+|+.
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~Ivi 96 (230)
T 3lec_A 17 NYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITI 96 (230)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred HhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEE
Confidence 356788899999999999999999876 357999998742 234788898877766668999875
Q ss_pred ccccccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEee
Q 025071 174 NVFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 174 ~~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
+.+-- .--...+.+..+.|+++|+++++-. ...+.+.+++.+.|+.-+.
T Consensus 97 aGmGg-~lI~~IL~~~~~~l~~~~~lIlqp~-------------~~~~~lr~~L~~~Gf~i~~ 145 (230)
T 3lec_A 97 CGMGG-RLIADILNNDIDKLQHVKTLVLQPN-------------NREDDLRKWLAANDFEIVA 145 (230)
T ss_dssp EEECH-HHHHHHHHHTGGGGTTCCEEEEEES-------------SCHHHHHHHHHHTTEEEEE
T ss_pred eCCch-HHHHHHHHHHHHHhCcCCEEEEECC-------------CChHHHHHHHHHCCCEEEE
Confidence 31110 0123567888999999999888631 1368899999999875443
No 230
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.96 E-value=2.5e-09 Score=101.85 Aligned_cols=92 Identities=12% Similarity=0.079 Sum_probs=70.3
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC---------------CCceeeecCCCCC--CCCCCeeEEE
Q 025071 112 FLFNESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR---------------PPLVIKGDFHAQP--FDNGTFDFEF 172 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~---------------~~~~~~aDa~~LP--f~d~SFD~V~ 172 (258)
...++.+|||+|||+|..+..+++. + ...|+|+|+++. ...++++|+..++ +++++||.|+
T Consensus 256 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl 335 (450)
T 2yxl_A 256 DPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVL 335 (450)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEE
Confidence 3567889999999999999888863 2 258999998742 2346778988887 7778999999
Q ss_pred ec-------cccccCCh----------------HHHHHHHHhcccCCcEEEEEe
Q 025071 173 SN-------VFDHALYP----------------WKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 173 s~-------~l~h~~~p----------------~~~l~Ei~RVLKPGG~lii~v 203 (258)
++ .+.+.++. ..+++++.++|||||++++.+
T Consensus 336 ~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t 389 (450)
T 2yxl_A 336 LDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT 389 (450)
T ss_dssp EECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 63 33433332 467899999999999998864
No 231
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.95 E-value=6.6e-10 Score=94.61 Aligned_cols=87 Identities=17% Similarity=0.166 Sum_probs=64.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC----------------CCceeeecCCCC-C-CC--C--CCee
Q 025071 114 FNESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR----------------PPLVIKGDFHAQ-P-FD--N--GTFD 169 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~----------------~~~~~~aDa~~L-P-f~--d--~SFD 169 (258)
.++.+|||||||+|..+..+++. + ..+|+|+|+++. ...++.+|+.+. + +. + ++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 36789999999999999999874 2 358999998752 123566766432 1 21 1 7899
Q ss_pred EEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 170 FEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 170 ~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+|+++.- ..+...+++++.|+|||||++++.
T Consensus 148 ~v~~d~~--~~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 148 VAVVDAD--KENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp EEEECSC--STTHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCC--HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 9998532 224567899999999999999885
No 232
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.93 E-value=2.3e-09 Score=95.17 Aligned_cols=110 Identities=13% Similarity=0.003 Sum_probs=80.7
Q ss_pred cCCCCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEe
Q 025071 111 HFLFNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFS 173 (258)
Q Consensus 111 ~~l~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s 173 (258)
..+.++.+|||||||+|.++.+|++.| ...|+|+|+++. ...+..+|..+...+++.||+|++
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Ivi 96 (244)
T 3gnl_A 17 SYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVI 96 (244)
T ss_dssp TTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred HhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEE
Confidence 356788999999999999999999876 347999998742 134678888776665557999876
Q ss_pred ccccccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEE
Q 025071 174 NVFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVA 234 (258)
Q Consensus 174 ~~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~ 234 (258)
+.+-- .--...+.+..+.|+++|+++++-. ...+.+.+++.+.|+.-
T Consensus 97 agmGg-~lI~~IL~~~~~~L~~~~~lIlq~~-------------~~~~~lr~~L~~~Gf~i 143 (244)
T 3gnl_A 97 AGMGG-TLIRTILEEGAAKLAGVTKLILQPN-------------IAAWQLREWSEQNNWLI 143 (244)
T ss_dssp EEECH-HHHHHHHHHTGGGGTTCCEEEEEES-------------SCHHHHHHHHHHHTEEE
T ss_pred eCCch-HHHHHHHHHHHHHhCCCCEEEEEcC-------------CChHHHHHHHHHCCCEE
Confidence 31110 0023467889999999999988631 14688999999888653
No 233
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.90 E-value=3.8e-09 Score=101.85 Aligned_cols=89 Identities=11% Similarity=0.119 Sum_probs=67.5
Q ss_pred CCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC---------------CCceeeecCCCCCC-CCCCeeEEEec--
Q 025071 115 NESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR---------------PPLVIKGDFHAQPF-DNGTFDFEFSN-- 174 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~---------------~~~~~~aDa~~LPf-~d~SFD~V~s~-- 174 (258)
++.+|||+|||+|..+..|++. + ...|+|+|+++. ...++++|+..++. .+++||.|+++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 7889999999999999988874 2 357999998742 12467789888775 57899999973
Q ss_pred -----cccccCC----------------hHHHHHHHHhcccCCcEEEEEe
Q 025071 175 -----VFDHALY----------------PWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 175 -----~l~h~~~----------------p~~~l~Ei~RVLKPGG~lii~v 203 (258)
++.+.++ ..++++++.|+|||||++++.+
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 2332221 2357899999999999998864
No 234
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.89 E-value=1.5e-09 Score=94.42 Aligned_cols=87 Identities=18% Similarity=0.261 Sum_probs=64.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC----------------CCceeeecCCCC-C-C-----CCCCe
Q 025071 114 FNESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR----------------PPLVIKGDFHAQ-P-F-----DNGTF 168 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~----------------~~~~~~aDa~~L-P-f-----~d~SF 168 (258)
.++.+|||||||+|..+..+++. + ..+++++|+++. ...++.+|+.+. | + ++++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 35679999999999999988864 2 358999998742 123567776542 3 2 26899
Q ss_pred eEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 169 DFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 169 D~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
|+|++.+- ..+...+++++.++|||||++++.
T Consensus 149 D~I~~d~~--~~~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 149 DFGFVDAD--KPNYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp EEEEECSC--GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CEEEECCc--hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 99998532 124567889999999999999875
No 235
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.89 E-value=6.2e-09 Score=91.27 Aligned_cols=110 Identities=13% Similarity=0.000 Sum_probs=78.8
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcC-CCcEEEEeCCCC----------------CCceeeecCC-CCCCCCCCeeEEEe
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVG-VSDSIGIDLVPR----------------PPLVIKGDFH-AQPFDNGTFDFEFS 173 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g-~~~v~GvD~s~~----------------~~~~~~aDa~-~LPf~d~SFD~V~s 173 (258)
.+.++.+|||||||+|..+.+++..+ ...|+|+|+++. ...+..+|.. .+|.. +.||+|+.
T Consensus 12 ~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~-~~~D~Ivi 90 (225)
T 3kr9_A 12 FVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEET-DQVSVITI 90 (225)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGG-GCCCEEEE
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccC-cCCCEEEE
Confidence 46778899999999999999999876 357999998742 1246777873 44432 26998886
Q ss_pred ccccccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEee
Q 025071 174 NVFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVR 236 (258)
Q Consensus 174 ~~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~ 236 (258)
+.+.. .--...+.+..+.|+|||++++.-. .....+.+++.+.|+.-+.
T Consensus 91 aG~Gg-~~i~~Il~~~~~~L~~~~~lVlq~~-------------~~~~~vr~~L~~~Gf~i~~ 139 (225)
T 3kr9_A 91 AGMGG-RLIARILEEGLGKLANVERLILQPN-------------NREDDLRIWLQDHGFQIVA 139 (225)
T ss_dssp EEECH-HHHHHHHHHTGGGCTTCCEEEEEES-------------SCHHHHHHHHHHTTEEEEE
T ss_pred cCCCh-HHHHHHHHHHHHHhCCCCEEEEECC-------------CCHHHHHHHHHHCCCEEEE
Confidence 42211 0124567899999999999888531 1468899999998876444
No 236
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.89 E-value=5.6e-09 Score=95.75 Aligned_cols=83 Identities=17% Similarity=0.128 Sum_probs=65.3
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEeccc
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSNVF 176 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~~l 176 (258)
+.++.+|||+|||+|..+.. ++ +...|+|+|+++. ...++++|+.+.+ ++||+|+++--
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP 267 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP 267 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT
T ss_pred cCCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc
Confidence 45788999999999999988 76 5568999998741 2347788888776 89999999621
Q ss_pred cccCChHHHHHHHHhcccCCcEEEEEe
Q 025071 177 DHALYPWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 177 ~h~~~p~~~l~Ei~RVLKPGG~lii~v 203 (258)
. ....++.++.++|+|||.+++..
T Consensus 268 ~---~~~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 268 K---FAHKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp T---TGGGGHHHHHHHEEEEEEEEEEE
T ss_pred H---hHHHHHHHHHHHcCCCCEEEEEE
Confidence 1 12367899999999999988864
No 237
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.88 E-value=1.9e-09 Score=101.48 Aligned_cols=90 Identities=16% Similarity=0.086 Sum_probs=65.5
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------------CCceeeecCCCC-CCCCCCeeEEEec--c
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------------PPLVIKGDFHAQ-PFDNGTFDFEFSN--V 175 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------------~~~~~~aDa~~L-Pf~d~SFD~V~s~--~ 175 (258)
..++.+|||+|||||..+..+++.|.. |+|+|+++. ...+.++|+.++ +..++.||+|+++ .
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~ 290 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPT 290 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCC
T ss_pred hcCCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCc
Confidence 446889999999999999999988864 999999752 123567777653 2223449999996 2
Q ss_pred ccc--------cCChHHHHHHHHhcccCCcEEEEEe
Q 025071 176 FDH--------ALYPWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 176 l~h--------~~~p~~~l~Ei~RVLKPGG~lii~v 203 (258)
+.. ..+...+++++.|+|||||++++..
T Consensus 291 f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s 326 (393)
T 4dmg_A 291 LVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSS 326 (393)
T ss_dssp CCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 221 1123467889999999999998654
No 238
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.88 E-value=1.5e-09 Score=104.45 Aligned_cols=91 Identities=18% Similarity=0.169 Sum_probs=68.4
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCCC--------------CCceeeecCCCCC-CCCCCeeEEEec-
Q 025071 113 LFNESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVPR--------------PPLVIKGDFHAQP-FDNGTFDFEFSN- 174 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~~--------------~~~~~~aDa~~LP-f~d~SFD~V~s~- 174 (258)
..++.+|||+|||+|..+..+++. + ...|+|+|+++. ...++++|+..++ +.+++||.|+++
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~ 178 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDA 178 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEEC
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECC
Confidence 567899999999999999988864 2 247999998742 1346678887776 457899999963
Q ss_pred ------cccccCCh----------------HHHHHHHHhcccCCcEEEEEe
Q 025071 175 ------VFDHALYP----------------WKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 175 ------~l~h~~~p----------------~~~l~Ei~RVLKPGG~lii~v 203 (258)
.+.+.++. .++++++.++|||||+++..+
T Consensus 179 PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 179 PCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp CCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 23332221 567899999999999998753
No 239
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.88 E-value=1e-08 Score=92.43 Aligned_cols=99 Identities=14% Similarity=0.131 Sum_probs=68.3
Q ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCC------CCC-------CceeeecCCCCCCCCCCeeEE
Q 025071 106 DLKQRHFLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLV------PRP-------PLVIKGDFHAQPFDNGTFDFE 171 (258)
Q Consensus 106 ~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s------~~~-------~~~~~aDa~~LPf~d~SFD~V 171 (258)
++.+...+.++.+|||+|||+|.++...++. +...|+|+|+. +.+ ....+.+++..+++++.||+|
T Consensus 65 ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlV 144 (277)
T 3evf_A 65 WFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTL 144 (277)
T ss_dssp HHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEE
T ss_pred HHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEE
Confidence 3444556778889999999999999977654 55567777764 111 012455556678889999999
Q ss_pred EeccccccC----ChH---HHHHHHHhcccCC-cEEEEEec
Q 025071 172 FSNVFDHAL----YPW---KFVGEIERTLKPA-GVCVLHVA 204 (258)
Q Consensus 172 ~s~~l~h~~----~p~---~~l~Ei~RVLKPG-G~lii~v~ 204 (258)
+|....+.- |-. ..++.+.++|||| |.+++=+-
T Consensus 145 lsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf 185 (277)
T 3evf_A 145 LCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVL 185 (277)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred EecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEec
Confidence 996322211 211 2358889999999 99988654
No 240
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.87 E-value=3.2e-09 Score=99.26 Aligned_cols=91 Identities=14% Similarity=0.163 Sum_probs=67.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-----------------CCceeeecCCC-CCC---CCCCeeEEE
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-----------------PPLVIKGDFHA-QPF---DNGTFDFEF 172 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-----------------~~~~~~aDa~~-LPf---~d~SFD~V~ 172 (258)
.++.+|||+|||+|..+..+++.|...|+|+|+++. ...++++|+.+ ++. .+++||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 467899999999999999998877668999999763 12467778755 332 256899999
Q ss_pred ec--cc----cccCChH----HHHHHHHhcccCCcEEEEEec
Q 025071 173 SN--VF----DHALYPW----KFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 173 s~--~l----~h~~~p~----~~l~Ei~RVLKPGG~lii~v~ 204 (258)
++ .+ .+..+.. .+++++.++|||||++++...
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 85 22 2333332 356778999999999988653
No 241
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.87 E-value=1.7e-09 Score=94.79 Aligned_cols=96 Identities=15% Similarity=0.148 Sum_probs=65.1
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-------------CCceeeecCCCCCCCC-CCee
Q 025071 104 FQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-------------PPLVIKGDFHAQPFDN-GTFD 169 (258)
Q Consensus 104 ~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-------------~~~~~~aDa~~LPf~d-~SFD 169 (258)
.+.+++...+.++.+|||||||+|..+..|++.+ .+|+|+|+++. ...++++|+.++|+++ +.|+
T Consensus 19 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~~ 97 (244)
T 1qam_A 19 IDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYK 97 (244)
T ss_dssp HHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCCE
T ss_pred HHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCeE
Confidence 3344444445678899999999999999998877 58999998641 2357889999999985 5664
Q ss_pred EEEec------------cccccCChHHHH---HH-HHhcccCCcEEEE
Q 025071 170 FEFSN------------VFDHALYPWKFV---GE-IERTLKPAGVCVL 201 (258)
Q Consensus 170 ~V~s~------------~l~h~~~p~~~l---~E-i~RVLKPGG~lii 201 (258)
|+++ .++|...+..++ +| +.|+++|||.+.+
T Consensus 98 -vv~nlPy~~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l~v 144 (244)
T 1qam_A 98 -IFGNIPYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSLAL 144 (244)
T ss_dssp -EEEECCGGGHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHHHH
T ss_pred -EEEeCCcccCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcchhH
Confidence 4443 122323333333 34 7888888885433
No 242
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.86 E-value=3.2e-08 Score=93.68 Aligned_cols=136 Identities=15% Similarity=0.240 Sum_probs=84.8
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCC----CC
Q 025071 102 RFFQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHA----QP 162 (258)
Q Consensus 102 ~~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~----LP 162 (258)
.+++.+++.....++.+|||+|||+|.++..|++.+ .+|+|+|+++. ...++++|+.+ +|
T Consensus 273 ~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~-~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~ 351 (433)
T 1uwv_A 273 KMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQA-ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQP 351 (433)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSG
T ss_pred HHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhC-CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhh
Confidence 344444443345567899999999999999999874 58999998742 23478888877 66
Q ss_pred CCCCCeeEEEeccccccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhh-cCceEEeeeecCC
Q 025071 163 FDNGTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFR-ESELVAVRKVDGF 241 (258)
Q Consensus 163 f~d~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~-~~~~~~v~~v~g~ 241 (258)
+++++||+|+++--.... ..+++.+.+ ++|++++++..... .+ .+.+..+.+ ...+..+..+|-|
T Consensus 352 ~~~~~fD~Vv~dPPr~g~--~~~~~~l~~-~~p~~ivyvsc~p~---------tl--ard~~~l~~~Gy~~~~~~~~d~F 417 (433)
T 1uwv_A 352 WAKNGFDKVLLDPARAGA--AGVMQQIIK-LEPIRIVYVSCNPA---------TL--ARDSEALLKAGYTIARLAMLDMF 417 (433)
T ss_dssp GGTTCCSEEEECCCTTCC--HHHHHHHHH-HCCSEEEEEESCHH---------HH--HHHHHHHHHTTCEEEEEEEECCS
T ss_pred hhcCCCCEEEECCCCccH--HHHHHHHHh-cCCCeEEEEECChH---------HH--HhhHHHHHHCCcEEEEEEEeccC
Confidence 888999999996111101 234455543 78999888753211 00 233433333 2335565666543
Q ss_pred ----CCeEEEEEEeC
Q 025071 242 ----GLDTEVVFRKK 252 (258)
Q Consensus 242 ----~l~~~~~f~K~ 252 (258)
+..+.+.|+|.
T Consensus 418 p~t~HvE~v~ll~r~ 432 (433)
T 1uwv_A 418 PHTGHLESMVLFSRV 432 (433)
T ss_dssp TTSSCCEEEEEEEC-
T ss_pred CCCCeEEEEEEEEEC
Confidence 44467777764
No 243
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.85 E-value=1.4e-09 Score=109.27 Aligned_cols=90 Identities=19% Similarity=0.271 Sum_probs=69.6
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-----------------CCceeeecCCC-CCCCCCCeeEEEec--
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-----------------PPLVIKGDFHA-QPFDNGTFDFEFSN-- 174 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-----------------~~~~~~aDa~~-LPf~d~SFD~V~s~-- 174 (258)
++.+|||+|||||..+..++..|..+|+++|+++. ...++++|+.+ ++..+++||+|+++
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 67899999999999999888877767999998741 13467788766 56667899999995
Q ss_pred cc----------cccCChHHHHHHHHhcccCCcEEEEEec
Q 025071 175 VF----------DHALYPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 175 ~l----------~h~~~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
.+ ++..+....++++.++|||||++++...
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 22 1222345678899999999999997653
No 244
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.85 E-value=5e-09 Score=94.64 Aligned_cols=61 Identities=26% Similarity=0.307 Sum_probs=46.1
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEecc
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSNV 175 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~~ 175 (258)
.+.++.+|||||||+|..+..|++.+ .+|+|+|+++. ...++.+|+.++|++ +||+|+++.
T Consensus 39 ~~~~~~~VLDiG~G~G~lt~~La~~~-~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~D~Vv~n~ 114 (299)
T 2h1r_A 39 KIKSSDIVLEIGCGTGNLTVKLLPLA-KKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP--KFDVCTANI 114 (299)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHTTTS-SEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC--CCSEEEEEC
T ss_pred CCCCcCEEEEEcCcCcHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc--cCCEEEEcC
Confidence 45678899999999999999998876 48999998641 224678899888875 899999973
No 245
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.85 E-value=1e-09 Score=102.46 Aligned_cols=90 Identities=19% Similarity=0.162 Sum_probs=68.3
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCCC----CCCCeeEEEe
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPF----DNGTFDFEFS 173 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf----~d~SFD~V~s 173 (258)
.++.+|||+|||+|..+..+++.|..+|+|+|+++. ...++++|+.++.. ++++||+|++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 477899999999999999998877668999998742 22467788765532 3679999999
Q ss_pred c--ccc--------ccCChHHHHHHHHhcccCCcEEEEEe
Q 025071 174 N--VFD--------HALYPWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 174 ~--~l~--------h~~~p~~~l~Ei~RVLKPGG~lii~v 203 (258)
+ .+. +......++.++.++|||||.+++..
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 335 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCS 335 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 5 111 11234567899999999999988764
No 246
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.82 E-value=2.6e-09 Score=99.70 Aligned_cols=90 Identities=12% Similarity=0.090 Sum_probs=68.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-----------------CCceeeecCCCCCC----CCCCeeEEE
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-----------------PPLVIKGDFHAQPF----DNGTFDFEF 172 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-----------------~~~~~~aDa~~LPf----~d~SFD~V~ 172 (258)
.++.+|||+|||+|..+..+++.|...|+|+|+++. ...++++|+.++.- .+++||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 467899999999999999999887668999998741 12467778765422 257899999
Q ss_pred ec--cc--------cccCChHHHHHHHHhcccCCcEEEEEe
Q 025071 173 SN--VF--------DHALYPWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 173 s~--~l--------~h~~~p~~~l~Ei~RVLKPGG~lii~v 203 (258)
++ .+ ++.......+.++.++|||||++++..
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 95 11 112344577899999999999998865
No 247
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.79 E-value=7.4e-09 Score=99.42 Aligned_cols=91 Identities=16% Similarity=0.169 Sum_probs=66.1
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhc--CCCcEEEEeCCCC---------------CCceeeecCCCCC-CCCCCeeEEEec
Q 025071 113 LFNESKALSIGARVGQEVAALKLV--GVSDSIGIDLVPR---------------PPLVIKGDFHAQP-FDNGTFDFEFSN 174 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~--g~~~v~GvD~s~~---------------~~~~~~aDa~~LP-f~d~SFD~V~s~ 174 (258)
..++.+|||+|||+|..+..+++. +...|+|+|+++. ...+.++|+..++ +.+++||.|+++
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 567899999999999999888764 2347999999752 1235667877765 356899999974
Q ss_pred -------cccccCC----------------hHHHHHHHHhcccCCcEEEEEe
Q 025071 175 -------VFDHALY----------------PWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 175 -------~l~h~~~----------------p~~~l~Ei~RVLKPGG~lii~v 203 (258)
++.+-++ ...+++++.++|||||+++..+
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2222111 1256899999999999998753
No 248
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.77 E-value=7.8e-09 Score=93.27 Aligned_cols=110 Identities=12% Similarity=0.077 Sum_probs=77.4
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEeccc
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSNVF 176 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~~l 176 (258)
+.+|.+|||+|||+|.++..++..|...|+|+|+++. ...+..+|+..++. .+.||.|+++..
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECCC
Confidence 5689999999999999998888878668999998752 12367789888764 578999998632
Q ss_pred cccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCc
Q 025071 177 DHALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESE 231 (258)
Q Consensus 177 ~h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~ 231 (258)
. ....++.++.++|||||++.+....... . ..-...+.+.+..++.|
T Consensus 202 ~---~~~~~l~~a~~~lk~gG~ih~~~~~~e~--~---~~~~~~e~i~~~~~~~g 248 (278)
T 3k6r_A 202 V---RTHEFIPKALSIAKDGAIIHYHNTVPEK--L---MPREPFETFKRITKEYG 248 (278)
T ss_dssp S---SGGGGHHHHHHHEEEEEEEEEEEEEEGG--G---TTTTTHHHHHHHHHHTT
T ss_pred C---cHHHHHHHHHHHcCCCCEEEEEeeeccc--c---cchhHHHHHHHHHHHcC
Confidence 2 2345678899999999998765322110 0 00112455667766665
No 249
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.76 E-value=1.3e-08 Score=96.51 Aligned_cols=133 Identities=14% Similarity=0.148 Sum_probs=84.4
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc--------------CCCcEEEEeCCCC-----------------CCceeeecCCCCC
Q 025071 114 FNESKALSIGARVGQEVAALKLV--------------GVSDSIGIDLVPR-----------------PPLVIKGDFHAQP 162 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~--------------g~~~v~GvD~s~~-----------------~~~~~~aDa~~LP 162 (258)
.++.+|||.|||+|.++..+.+. ....++|+|+++. ...+.++|+...+
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE 249 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc
Confidence 34679999999999988766542 1247999998631 3457888888777
Q ss_pred CCCCCeeEEEec-cccccC--C---------------hHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHH
Q 025071 163 FDNGTFDFEFSN-VFDHAL--Y---------------PWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLV 224 (258)
Q Consensus 163 f~d~SFD~V~s~-~l~h~~--~---------------p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~ 224 (258)
... +||+|+++ -+.+.. + ...+++++.+.|||||++++.++..- -+... ....+.
T Consensus 250 ~~~-~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~---L~~~~---~~~~iR 322 (445)
T 2okc_A 250 PST-LVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDNV---LFEAG---AGETIR 322 (445)
T ss_dssp CSS-CEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHH---HHCST---HHHHHH
T ss_pred ccC-CcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCcc---cccCc---HHHHHH
Confidence 554 89999997 222211 1 13678999999999999999876320 00000 124566
Q ss_pred H-HhhcCceEEeeeec-----CCCCeE-EEEEEeCC
Q 025071 225 K-LFRESELVAVRKVD-----GFGLDT-EVVFRKKK 253 (258)
Q Consensus 225 ~-lf~~~~~~~v~~v~-----g~~l~~-~~~f~K~~ 253 (258)
+ ++++..+..+.... +.+.++ .++|+|+.
T Consensus 323 ~~L~~~~~l~~ii~lp~~~F~~t~v~t~Il~~~k~~ 358 (445)
T 2okc_A 323 KRLLQDFNLHTILRLPTGIFYAQGVKANVLFFSKGQ 358 (445)
T ss_dssp HHHHHHEEEEEEEECCSSSSSSTTCCEEEEEEEESS
T ss_pred HHHHhcCcEEEEEeCCCCCccCCCCCEEEEEEECCC
Confidence 5 44555554444332 234444 66777754
No 250
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.74 E-value=1.7e-08 Score=95.01 Aligned_cols=116 Identities=15% Similarity=0.088 Sum_probs=75.2
Q ss_pred CCEEEEECCCCCHHHHHHHhc------------------CCCcEEEEeCCC------------------------CCCce
Q 025071 116 ESKALSIGARVGQEVAALKLV------------------GVSDSIGIDLVP------------------------RPPLV 153 (258)
Q Consensus 116 ~~~VLDIGcGtG~~~~~L~~~------------------g~~~v~GvD~s~------------------------~~~~~ 153 (258)
.-+|+|+||++|.++..+... ..-.|+..|+-. .++.+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 568999999999987654321 112466777531 01233
Q ss_pred ee---ecCCCCCCCCCCeeEEEec-cccccCChHH------------------------H---------------HHHHH
Q 025071 154 IK---GDFHAQPFDNGTFDFEFSN-VFDHALYPWK------------------------F---------------VGEIE 190 (258)
Q Consensus 154 ~~---aDa~~LPf~d~SFD~V~s~-~l~h~~~p~~------------------------~---------------l~Ei~ 190 (258)
+. +.+..-.|+++|||+|+|+ +|||+.+... + ++-.+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 3456688999999999996 7877654321 1 33448
Q ss_pred hcccCCcEEEEEeccccCc--C-----------------------c---C-CCCCCCChhHHHHHhhcCc
Q 025071 191 RTLKPAGVCVLHVALSRRA--D-----------------------K---Y-SANDLFSVKPLVKLFRESE 231 (258)
Q Consensus 191 RVLKPGG~lii~v~~~~~~--~-----------------------~---y-~~~~~~s~~~l~~lf~~~~ 231 (258)
|+|||||++++.+...+.. + + + ....+.+.+|+..++++.|
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g 282 (384)
T 2efj_A 213 EELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEG 282 (384)
T ss_dssp HHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHC
T ss_pred HHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcC
Confidence 9999999999986533221 1 0 1 1223358899999998765
No 251
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.73 E-value=2.3e-08 Score=90.80 Aligned_cols=70 Identities=17% Similarity=0.124 Sum_probs=56.9
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-------------CCceeeecCCCCCCCCCCeeE
Q 025071 104 FQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-------------PPLVIKGDFHAQPFDNGTFDF 170 (258)
Q Consensus 104 ~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-------------~~~~~~aDa~~LPf~d~SFD~ 170 (258)
.+.+++...+.++.+|||||||+|..+..|++.+ .+|+|+|+++. ...++++|+.++++++.+||.
T Consensus 39 ~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~fD~ 117 (295)
T 3gru_A 39 VNKAVESANLTKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFNK 117 (295)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCCSE
T ss_pred HHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCccE
Confidence 3344444456678899999999999999998875 58999999753 235789999999999999999
Q ss_pred EEec
Q 025071 171 EFSN 174 (258)
Q Consensus 171 V~s~ 174 (258)
|+++
T Consensus 118 Iv~N 121 (295)
T 3gru_A 118 VVAN 121 (295)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9987
No 252
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.72 E-value=1.9e-08 Score=89.60 Aligned_cols=97 Identities=10% Similarity=0.090 Sum_probs=68.6
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------------CCceeeecCCCCCCCC
Q 025071 100 FSRFFQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------------PPLVIKGDFHAQPFDN 165 (258)
Q Consensus 100 ~~~~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------------~~~~~~aDa~~LPf~d 165 (258)
+..+|..+.+. .++.+|||||||+|-++..+. +...++|+|+++. +..+.++|...-|.++
T Consensus 93 ld~fY~~i~~~---~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~ 167 (253)
T 3frh_A 93 LDTLYDFIFSA---ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAE 167 (253)
T ss_dssp HHHHHHHHTSS---CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCC
T ss_pred HHHHHHHHhcC---CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCC
Confidence 44555544432 567899999999999988766 5568999999742 1236778888888776
Q ss_pred CCeeEEEec-cccccCC--hHHHHHHHHhcccCCcEEEEEec
Q 025071 166 GTFDFEFSN-VFDHALY--PWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 166 ~SFD~V~s~-~l~h~~~--p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
+||+|++. +++|+.+ +...+ ++.+.|+++|+++- +|
T Consensus 168 -~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvVs-fP 206 (253)
T 3frh_A 168 -AGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAVS-FP 206 (253)
T ss_dssp -BCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEEE-EE
T ss_pred -CcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEEE-cC
Confidence 89999986 5555542 22333 88899999866544 44
No 253
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.72 E-value=4e-09 Score=98.15 Aligned_cols=89 Identities=15% Similarity=0.113 Sum_probs=66.2
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCCC----CCCCeeEEEec-
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQPF----DNGTFDFEFSN- 174 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf----~d~SFD~V~s~- 174 (258)
++.+|||+|||+|..+..+++. ..+|+|+|+++. ...++++|+.++.. ++++||+|+++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 6789999999999999988876 458999998742 13467788765532 26799999995
Q ss_pred -ccc--------ccCChHHHHHHHHhcccCCcEEEEEec
Q 025071 175 -VFD--------HALYPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 175 -~l~--------h~~~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
.+. +......++.++.++|||||.+++...
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 111 112335678999999999999988753
No 254
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.68 E-value=8.9e-08 Score=90.90 Aligned_cols=86 Identities=16% Similarity=0.065 Sum_probs=62.8
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC--------------CCceeeecCCCCCCCCCCeeEEEeccccc
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR--------------PPLVIKGDFHAQPFDNGTFDFEFSNVFDH 178 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~--------------~~~~~~aDa~~LPf~d~SFD~V~s~~l~h 178 (258)
+.++.+|||+|||+|.++..|++.+ .+|+|+|+++. ...+.++|+.+++.. +||+|+++--..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~-~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~--~fD~Vv~dPPr~ 364 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRG-FNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVK--GFDTVIVDPPRA 364 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCT--TCSEEEECCCTT
T ss_pred cCCCCEEEEeeccchHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCcc--CCCEEEEcCCcc
Confidence 4567899999999999999998875 48999998742 134788899887533 899999951111
Q ss_pred cCChHHHHHHHHhcccCCcEEEEEe
Q 025071 179 ALYPWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 179 ~~~p~~~l~Ei~RVLKPGG~lii~v 203 (258)
-....+++++ +.|+|||++++..
T Consensus 365 -g~~~~~~~~l-~~l~p~givyvsc 387 (425)
T 2jjq_A 365 -GLHPRLVKRL-NREKPGVIVYVSC 387 (425)
T ss_dssp -CSCHHHHHHH-HHHCCSEEEEEES
T ss_pred -chHHHHHHHH-HhcCCCcEEEEEC
Confidence 1123455555 4599999998864
No 255
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.63 E-value=8.2e-08 Score=88.93 Aligned_cols=131 Identities=11% Similarity=0.087 Sum_probs=81.3
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCC--CC
Q 025071 102 RFFQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQP--FD 164 (258)
Q Consensus 102 ~~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LP--f~ 164 (258)
.++..+++.... .+.+|||+|||+|.++..|++. ...|+|+|+++. ...++++|++++. +.
T Consensus 201 ~l~~~~~~~~~~-~~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~ 278 (369)
T 3bt7_A 201 QMLEWALDVTKG-SKGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMN 278 (369)
T ss_dssp HHHHHHHHHTTT-CCSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHS
T ss_pred HHHHHHHHHhhc-CCCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHh
Confidence 344444443222 3578999999999999999874 458999998742 1246777776542 22
Q ss_pred C--------------CCeeEEEeccccccCChHH--HHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhh
Q 025071 165 N--------------GTFDFEFSNVFDHALYPWK--FVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFR 228 (258)
Q Consensus 165 d--------------~SFD~V~s~~l~h~~~p~~--~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~ 228 (258)
+ ++||+|+.+ |.. +..++.++|+|+|.++... .... . -.+.+..+..
T Consensus 279 ~~~~~~~l~~~~~~~~~fD~Vv~d-------PPr~g~~~~~~~~l~~~g~ivyvs-c~p~-------t--~ard~~~l~~ 341 (369)
T 3bt7_A 279 GVREFNRLQGIDLKSYQCETIFVD-------PPRSGLDSETEKMVQAYPRILYIS-CNPE-------T--LCKNLETLSQ 341 (369)
T ss_dssp SCCCCTTGGGSCGGGCCEEEEEEC-------CCTTCCCHHHHHHHTTSSEEEEEE-SCHH-------H--HHHHHHHHHH
T ss_pred hccccccccccccccCCCCEEEEC-------cCccccHHHHHHHHhCCCEEEEEE-CCHH-------H--HHHHHHHHhh
Confidence 2 489999985 211 2367888999999877653 1110 0 1244444444
Q ss_pred cCceEEeeeecCC----CCeEEEEEEe
Q 025071 229 ESELVAVRKVDGF----GLDTEVVFRK 251 (258)
Q Consensus 229 ~~~~~~v~~v~g~----~l~~~~~f~K 251 (258)
...+..+..+|-| ++.+.++|+|
T Consensus 342 ~y~~~~~~~~D~FP~T~HvE~v~ll~r 368 (369)
T 3bt7_A 342 THKVERLALFDQFPYTHHMQCGVLLTA 368 (369)
T ss_dssp HEEEEEEEEECCSTTSSCCEEEEEEEE
T ss_pred CcEEEEEEeeccCCCCCcEEEEEEEEe
Confidence 4556677777643 3336677765
No 256
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.60 E-value=3e-07 Score=86.15 Aligned_cols=90 Identities=19% Similarity=0.209 Sum_probs=61.7
Q ss_pred CCEEEEECCCCCHHHHHH--------Hh----cC----CCcEEEEeCCCC---------------------------CCc
Q 025071 116 ESKALSIGARVGQEVAAL--------KL----VG----VSDSIGIDLVPR---------------------------PPL 152 (258)
Q Consensus 116 ~~~VLDIGcGtG~~~~~L--------~~----~g----~~~v~GvD~s~~---------------------------~~~ 152 (258)
+.+|+|+|||+|.++..+ .+ .| .-+|...|+-.. ++.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 468999999999987654 11 11 235777775211 011
Q ss_pred e---eeecCCCCCCCCCCeeEEEec-cccccCCh--------------------------------------HHHHHHHH
Q 025071 153 V---IKGDFHAQPFDNGTFDFEFSN-VFDHALYP--------------------------------------WKFVGEIE 190 (258)
Q Consensus 153 ~---~~aDa~~LPf~d~SFD~V~s~-~l~h~~~p--------------------------------------~~~l~Ei~ 190 (258)
+ +-+.+..-.|+++|||+|+|+ +|||+.+. ..+++..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 223455677999999999996 78776522 22577889
Q ss_pred hcccCCcEEEEEecc
Q 025071 191 RTLKPAGVCVLHVAL 205 (258)
Q Consensus 191 RVLKPGG~lii~v~~ 205 (258)
|+|||||++++.+..
T Consensus 213 ~eL~pGG~mvl~~~g 227 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLG 227 (374)
T ss_dssp HHEEEEEEEEEEEEE
T ss_pred HHhCCCCEEEEEEec
Confidence 999999999998653
No 257
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.55 E-value=1.5e-07 Score=88.52 Aligned_cols=101 Identities=11% Similarity=-0.006 Sum_probs=70.2
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCC---------------------------------------CcEEE
Q 025071 103 FFQDLKQRHFLFNESKALSIGARVGQEVAALKLVGV---------------------------------------SDSIG 143 (258)
Q Consensus 103 ~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~---------------------------------------~~v~G 143 (258)
+...++......++..|||.+||+|.++..++..+. ..|+|
T Consensus 189 lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 268 (393)
T 3k0b_A 189 MAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIG 268 (393)
T ss_dssp HHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEE
Confidence 444445444556778999999999998876654321 24999
Q ss_pred EeCCCC----------------CCceeeecCCCCCCCCCCeeEEEec--cccccC---ChHHHHHHHHhcccC--CcEEE
Q 025071 144 IDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSN--VFDHAL---YPWKFVGEIERTLKP--AGVCV 200 (258)
Q Consensus 144 vD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~--~l~h~~---~p~~~l~Ei~RVLKP--GG~li 200 (258)
+|+++. ...+.++|+.+++.++ +||+|+++ .-.... +....++++.++||+ ||.++
T Consensus 269 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~-~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 347 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTED-EYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVY 347 (393)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCC-CSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCC-CCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEE
Confidence 998742 2357889999998764 89999997 222221 223456777778877 99988
Q ss_pred EEec
Q 025071 201 LHVA 204 (258)
Q Consensus 201 i~v~ 204 (258)
+.++
T Consensus 348 iit~ 351 (393)
T 3k0b_A 348 VLTS 351 (393)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8775
No 258
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.54 E-value=1.4e-07 Score=84.54 Aligned_cols=69 Identities=17% Similarity=0.239 Sum_probs=54.7
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC------------CCceeeecCCCCCCCCC-CeeE
Q 025071 104 FQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR------------PPLVIKGDFHAQPFDNG-TFDF 170 (258)
Q Consensus 104 ~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~------------~~~~~~aDa~~LPf~d~-SFD~ 170 (258)
.+.+++...+.++ +|||||||+|..+..|++.+ .+|+|+|+++. ...++++|+.++++++. .+|.
T Consensus 36 ~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~~ 113 (271)
T 3fut_A 36 LRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGSL 113 (271)
T ss_dssp HHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTEE
T ss_pred HHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCccE
Confidence 3444444456677 99999999999999999887 58999998752 23578899999999764 7899
Q ss_pred EEec
Q 025071 171 EFSN 174 (258)
Q Consensus 171 V~s~ 174 (258)
|++|
T Consensus 114 iv~N 117 (271)
T 3fut_A 114 LVAN 117 (271)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9997
No 259
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.54 E-value=1.1e-07 Score=89.06 Aligned_cols=101 Identities=12% Similarity=0.023 Sum_probs=71.3
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCC---------------------------------------CcEEE
Q 025071 103 FFQDLKQRHFLFNESKALSIGARVGQEVAALKLVGV---------------------------------------SDSIG 143 (258)
Q Consensus 103 ~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~---------------------------------------~~v~G 143 (258)
+.+.++......++.+|||++||+|.++..++..+. ..|+|
T Consensus 183 lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 262 (385)
T 3ldu_A 183 LAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYG 262 (385)
T ss_dssp HHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEE
T ss_pred HHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEE
Confidence 444445544456778999999999998877654321 36999
Q ss_pred EeCCCC----------------CCceeeecCCCCCCCCCCeeEEEec--cccccC---ChHHHHHHHHhcccC--CcEEE
Q 025071 144 IDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSN--VFDHAL---YPWKFVGEIERTLKP--AGVCV 200 (258)
Q Consensus 144 vD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~--~l~h~~---~p~~~l~Ei~RVLKP--GG~li 200 (258)
+|+++. ...+.++|+.+++.+ ++||+|+++ ..+... +....++++.++||+ ||.++
T Consensus 263 vDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 341 (385)
T 3ldu_A 263 YDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYY 341 (385)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEE
Confidence 999752 134788999998875 489999997 222221 234567888888887 88888
Q ss_pred EEec
Q 025071 201 LHVA 204 (258)
Q Consensus 201 i~v~ 204 (258)
+.++
T Consensus 342 iit~ 345 (385)
T 3ldu_A 342 LITS 345 (385)
T ss_dssp EEES
T ss_pred EEEC
Confidence 8775
No 260
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.54 E-value=1.4e-07 Score=83.84 Aligned_cols=69 Identities=12% Similarity=0.072 Sum_probs=53.1
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-------------CCceeeecCCCCCCCC----C
Q 025071 104 FQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-------------PPLVIKGDFHAQPFDN----G 166 (258)
Q Consensus 104 ~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-------------~~~~~~aDa~~LPf~d----~ 166 (258)
.+.+++...+.++.+|||||||+|..+..|++.+ .+|+|+|+++. ...++++|+.++++++ +
T Consensus 18 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~ 96 (255)
T 3tqs_A 18 LQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDK 96 (255)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCCSS
T ss_pred HHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhccCC
Confidence 3344444456678899999999999999999877 58999998641 2357899999999864 5
Q ss_pred CeeEEEec
Q 025071 167 TFDFEFSN 174 (258)
Q Consensus 167 SFD~V~s~ 174 (258)
.|| |++|
T Consensus 97 ~~~-vv~N 103 (255)
T 3tqs_A 97 PLR-VVGN 103 (255)
T ss_dssp CEE-EEEE
T ss_pred CeE-EEec
Confidence 798 6664
No 261
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.52 E-value=8.1e-08 Score=89.77 Aligned_cols=90 Identities=14% Similarity=0.175 Sum_probs=65.1
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-----------------------CCceeeecCCCCCC----CCCC
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-----------------------PPLVIKGDFHAQPF----DNGT 167 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-----------------------~~~~~~aDa~~LPf----~d~S 167 (258)
++.+|||||||+|..+.++.+.+..+|++||+++. ...++.+|+.+.-- ++++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 56899999999999999888776678999998631 12355666654321 3678
Q ss_pred eeEEEecccc--ccC-----ChHHHHHHH----HhcccCCcEEEEEec
Q 025071 168 FDFEFSNVFD--HAL-----YPWKFVGEI----ERTLKPAGVCVLHVA 204 (258)
Q Consensus 168 FD~V~s~~l~--h~~-----~p~~~l~Ei----~RVLKPGG~lii~v~ 204 (258)
||+|++.... ... .-..+++++ .|+|+|||++++...
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 9999996432 111 235667777 899999999998753
No 262
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.52 E-value=2.6e-07 Score=86.66 Aligned_cols=102 Identities=13% Similarity=0.058 Sum_probs=71.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCC---------------------------------------CcEE
Q 025071 102 RFFQDLKQRHFLFNESKALSIGARVGQEVAALKLVGV---------------------------------------SDSI 142 (258)
Q Consensus 102 ~~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~---------------------------------------~~v~ 142 (258)
.+...++......++..+||.+||+|.++...+..+. ..++
T Consensus 181 ~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~ 260 (384)
T 3ldg_A 181 NMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDIS 260 (384)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEE
Confidence 3444445544556778999999999998876654321 2499
Q ss_pred EEeCCCC----------------CCceeeecCCCCCCCCCCeeEEEec--cccccC---ChHHHHHHHHhcccC--CcEE
Q 025071 143 GIDLVPR----------------PPLVIKGDFHAQPFDNGTFDFEFSN--VFDHAL---YPWKFVGEIERTLKP--AGVC 199 (258)
Q Consensus 143 GvD~s~~----------------~~~~~~aDa~~LPf~d~SFD~V~s~--~l~h~~---~p~~~l~Ei~RVLKP--GG~l 199 (258)
|+|+++. ...+.++|+.+++.++ +||+|++| .-..+. +....++++.++||+ ||.+
T Consensus 261 GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~-~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~ 339 (384)
T 3ldg_A 261 GFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNK-INGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQ 339 (384)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCC-CSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccC-CcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEE
Confidence 9998742 1347889999998765 89999997 111121 234566778888887 9999
Q ss_pred EEEec
Q 025071 200 VLHVA 204 (258)
Q Consensus 200 ii~v~ 204 (258)
++.++
T Consensus 340 ~iit~ 344 (384)
T 3ldg_A 340 FILTN 344 (384)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 88875
No 263
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.47 E-value=1.1e-07 Score=85.57 Aligned_cols=100 Identities=12% Similarity=0.079 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC--------------CCceeeecCCCCCC
Q 025071 99 VFSRFFQDLKQRHFLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR--------------PPLVIKGDFHAQPF 163 (258)
Q Consensus 99 ~~~~~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~--------------~~~~~~aDa~~LPf 163 (258)
.+..+|..+.+. +.++.+|||||||+|-++..+... +...++|+|+++. ...+.+.|...-+
T Consensus 118 ~lD~fY~~i~~~--i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~- 194 (281)
T 3lcv_B 118 HLDEFYRELFRH--LPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR- 194 (281)
T ss_dssp GHHHHHHHHGGG--SCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-
T ss_pred hHHHHHHHHHhc--cCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-
Confidence 345556555442 355789999999999998877654 5568999998642 1235666665444
Q ss_pred CCCCeeEEEec-cccccCChH--HHHHHHHhcccCCcEEEEE
Q 025071 164 DNGTFDFEFSN-VFDHALYPW--KFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 164 ~d~SFD~V~s~-~l~h~~~p~--~~l~Ei~RVLKPGG~lii~ 202 (258)
+.+.+|+|++. +++|+.+.+ ..+ ++.+.|+|||.++-.
T Consensus 195 p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 195 LDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTF 235 (281)
T ss_dssp CCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEE
T ss_pred CCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEec
Confidence 56789999996 777775332 344 999999999877543
No 264
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.47 E-value=2.2e-07 Score=82.66 Aligned_cols=118 Identities=18% Similarity=0.188 Sum_probs=77.9
Q ss_pred CCCEEEEECCCCCHHHHHHHhc-------CC------CcEEEEeCCCC--------------------------------
Q 025071 115 NESKALSIGARVGQEVAALKLV-------GV------SDSIGIDLVPR-------------------------------- 149 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~-------g~------~~v~GvD~s~~-------------------------------- 149 (258)
++.+|||||||+|..+..+.+. +. .+++++|..+.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4568999999999987665331 21 37899997651
Q ss_pred ------C-----CceeeecCCC-CCCCCC----CeeEEEeccccccCCh----HHHHHHHHhcccCCcEEEEEeccccCc
Q 025071 150 ------P-----PLVIKGDFHA-QPFDNG----TFDFEFSNVFDHALYP----WKFVGEIERTLKPAGVCVLHVALSRRA 209 (258)
Q Consensus 150 ------~-----~~~~~aDa~~-LPf~d~----SFD~V~s~~l~h~~~p----~~~l~Ei~RVLKPGG~lii~v~~~~~~ 209 (258)
. ..++.+|+.+ +|--++ .||+|+...+.-..+| ..++++++|+|||||+++....
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysa----- 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTS----- 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCC-----
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeC-----
Confidence 0 0145667655 554333 7999999654332233 3578999999999999875221
Q ss_pred CcCCCCCCCChhHHHHHhhcCceEEeeeecCCCCeEEEE
Q 025071 210 DKYSANDLFSVKPLVKLFRESELVAVRKVDGFGLDTEVV 248 (258)
Q Consensus 210 ~~y~~~~~~s~~~l~~lf~~~~~~~v~~v~g~~l~~~~~ 248 (258)
...+.+.+.++|+. +..+.|++-+++++
T Consensus 215 ----------a~~vrr~L~~aGF~-v~~~~g~~~kr~m~ 242 (257)
T 2qy6_A 215 ----------AGFVRRGLQEAGFT-MQKRKGFGRKREML 242 (257)
T ss_dssp ----------BHHHHHHHHHHTEE-EEEECCSTTCCCEE
T ss_pred ----------CHHHHHHHHHCCCE-EEeCCCCCCCCceE
Confidence 13466777778886 45556777665433
No 265
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.45 E-value=2.9e-07 Score=85.92 Aligned_cols=91 Identities=19% Similarity=0.174 Sum_probs=62.1
Q ss_pred CCCEEEEECCCCCHHHHH--------HHh----cC-----CCcEEEEeCCCC----------------CCceee---ecC
Q 025071 115 NESKALSIGARVGQEVAA--------LKL----VG-----VSDSIGIDLVPR----------------PPLVIK---GDF 158 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~--------L~~----~g-----~~~v~GvD~s~~----------------~~~~~~---aDa 158 (258)
..-+|+|+||++|.++.. +.+ .+ .-.|+..|+... .+.++. +.+
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 346799999999986532 221 12 125788886311 123333 456
Q ss_pred CCCCCCCCCeeEEEec-cccccCChH---------------------------------HHHHHHHhcccCCcEEEEEec
Q 025071 159 HAQPFDNGTFDFEFSN-VFDHALYPW---------------------------------KFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 159 ~~LPf~d~SFD~V~s~-~l~h~~~p~---------------------------------~~l~Ei~RVLKPGG~lii~v~ 204 (258)
....|+++|||+|+|+ ++||+.+.. .+++-.+|.|||||++++.+.
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 6789999999999996 777765311 236777999999999999865
Q ss_pred c
Q 025071 205 L 205 (258)
Q Consensus 205 ~ 205 (258)
.
T Consensus 211 g 211 (359)
T 1m6e_X 211 G 211 (359)
T ss_dssp E
T ss_pred c
Confidence 3
No 266
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.42 E-value=4.6e-07 Score=81.85 Aligned_cols=99 Identities=10% Similarity=0.030 Sum_probs=64.2
Q ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHh-cCCCcEEEEeCCCC----CC-------c--eeeecCCCCCCCCCCeeEE
Q 025071 106 DLKQRHFLFNESKALSIGARVGQEVAALKL-VGVSDSIGIDLVPR----PP-------L--VIKGDFHAQPFDNGTFDFE 171 (258)
Q Consensus 106 ~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~-~g~~~v~GvD~s~~----~~-------~--~~~aDa~~LPf~d~SFD~V 171 (258)
++.+...+.++.+|||+|||+|.++.+.++ .|...|+|+|+... +. . ....+.+-..++++.+|+|
T Consensus 81 ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvV 160 (282)
T 3gcz_A 81 WMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTL 160 (282)
T ss_dssp HHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEE
T ss_pred HHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEE
Confidence 444555678888999999999999997764 56667899998532 11 1 1222222234567899999
Q ss_pred EeccccccCCh----H---HHHHHHHhcccCC--cEEEEEec
Q 025071 172 FSNVFDHALYP----W---KFVGEIERTLKPA--GVCVLHVA 204 (258)
Q Consensus 172 ~s~~l~h~~~p----~---~~l~Ei~RVLKPG--G~lii~v~ 204 (258)
+|....+.-.+ . ..+.=+.++|||| |.+++=+-
T Consensus 161 LSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF 202 (282)
T 3gcz_A 161 LCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVL 202 (282)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEES
T ss_pred EecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEe
Confidence 99622221111 1 2345557899999 99888654
No 267
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.38 E-value=4.2e-07 Score=88.73 Aligned_cols=92 Identities=18% Similarity=0.128 Sum_probs=64.5
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc----C---------------CCcEEEEeCCCC--------------C------Ccee
Q 025071 114 FNESKALSIGARVGQEVAALKLV----G---------------VSDSIGIDLVPR--------------P------PLVI 154 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~----g---------------~~~v~GvD~s~~--------------~------~~~~ 154 (258)
.++.+|||.|||+|.++..+.+. + ...++|+|+++. . ..+.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 45679999999999987655431 1 136999998631 1 3467
Q ss_pred eecCCCCC-CCCCCeeEEEec-cccccC-------------C-hHHHHHHHHhcccCCcEEEEEecc
Q 025071 155 KGDFHAQP-FDNGTFDFEFSN-VFDHAL-------------Y-PWKFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 155 ~aDa~~LP-f~d~SFD~V~s~-~l~h~~-------------~-p~~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
++|+...+ +.++.||+|++| =+.... + ...++..+.+.|||||++++.++.
T Consensus 248 ~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 248 LGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp ESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred eCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 78776544 456799999997 111111 1 136789999999999999998764
No 268
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.34 E-value=1.8e-06 Score=71.24 Aligned_cols=83 Identities=11% Similarity=0.103 Sum_probs=59.4
Q ss_pred CCCCEEEEECCCCC-HHHHHHHh-cCCCcEEEEeCCCCCCceeeecCCCCCCCC--CCeeEEEeccccccCChHHHHHHH
Q 025071 114 FNESKALSIGARVG-QEVAALKL-VGVSDSIGIDLVPRPPLVIKGDFHAQPFDN--GTFDFEFSNVFDHALYPWKFVGEI 189 (258)
Q Consensus 114 ~~~~~VLDIGcGtG-~~~~~L~~-~g~~~v~GvD~s~~~~~~~~aDa~~LPf~d--~SFD~V~s~~l~h~~~p~~~l~Ei 189 (258)
.++++|||||||.| ..+..|++ .|+ +|+++|+++....+++.|..+ |..+ +.||+|.+ +.--.+-+..+.++
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~~v~dDiF~-P~~~~Y~~~DLIYs--irPP~El~~~i~~l 109 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGGIVRDDITS-PRMEIYRGAALIYS--IRPPAEIHSSLMRV 109 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTTEECCCSSS-CCHHHHTTEEEEEE--ESCCTTTHHHHHHH
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccceEEccCCC-CcccccCCcCEEEE--cCCCHHHHHHHHHH
Confidence 45689999999999 69999997 886 799999998777789999877 5443 48999987 21112234445555
Q ss_pred HhcccCCcEEEEE
Q 025071 190 ERTLKPAGVCVLH 202 (258)
Q Consensus 190 ~RVLKPGG~lii~ 202 (258)
++-. |.-+++.
T Consensus 110 A~~v--~adliI~ 120 (153)
T 2k4m_A 110 ADAV--GARLIIK 120 (153)
T ss_dssp HHHH--TCEEEEE
T ss_pred HHHc--CCCEEEE
Confidence 5533 4556554
No 269
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.34 E-value=2.3e-06 Score=75.47 Aligned_cols=71 Identities=15% Similarity=0.086 Sum_probs=52.0
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-----------CCceeeecCCCCCCCCCC-eeEE
Q 025071 104 FQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-----------PPLVIKGDFHAQPFDNGT-FDFE 171 (258)
Q Consensus 104 ~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-----------~~~~~~aDa~~LPf~d~S-FD~V 171 (258)
.+.+++.....++.+|||||||+|..+..|++.|..+|+|+|+++. ...++++|+.++|+++.. ...|
T Consensus 20 ~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~v 99 (249)
T 3ftd_A 20 LKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGKELKV 99 (249)
T ss_dssp HHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSSEEE
T ss_pred HHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCCcEE
Confidence 3344444445678899999999999999999886568999998631 125788999999998632 2255
Q ss_pred Eec
Q 025071 172 FSN 174 (258)
Q Consensus 172 ~s~ 174 (258)
++|
T Consensus 100 v~N 102 (249)
T 3ftd_A 100 VGN 102 (249)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 270
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.33 E-value=8.3e-08 Score=85.25 Aligned_cols=60 Identities=17% Similarity=0.240 Sum_probs=48.1
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCC-------C----------------CCceeeecCCCC-C-CCC--C
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVP-------R----------------PPLVIKGDFHAQ-P-FDN--G 166 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~-------~----------------~~~~~~aDa~~L-P-f~d--~ 166 (258)
.++.+|||+|||+|..+..|++.|. +|+|+|+++ . ...++++|+.++ + +++ +
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 3567999999999999999998874 899999987 2 134677888763 4 555 7
Q ss_pred CeeEEEec
Q 025071 167 TFDFEFSN 174 (258)
Q Consensus 167 SFD~V~s~ 174 (258)
+||+|+++
T Consensus 161 ~fD~V~~d 168 (258)
T 2r6z_A 161 KPDIVYLD 168 (258)
T ss_dssp CCSEEEEC
T ss_pred CccEEEEC
Confidence 99999996
No 271
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.32 E-value=2.2e-06 Score=78.07 Aligned_cols=89 Identities=12% Similarity=0.035 Sum_probs=61.2
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhc--CCCcEEEEeCCCC---------------CCceeeecCCCCCCCC---CCeeEEE
Q 025071 113 LFNESKALSIGARVGQEVAALKLV--GVSDSIGIDLVPR---------------PPLVIKGDFHAQPFDN---GTFDFEF 172 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~--g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~d---~SFD~V~ 172 (258)
..++.+|||+|||+|..+..+++. +...|+|+|+++. ...++++|+.+++..+ ++||.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 567889999999999999888763 3358999998642 1246788888876543 5899999
Q ss_pred ec-------cccccCC-----------h-------HHHHHHHHhcccCCcEEEEE
Q 025071 173 SN-------VFDHALY-----------P-------WKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 173 s~-------~l~h~~~-----------p-------~~~l~Ei~RVLKPGG~lii~ 202 (258)
++ .+...++ . .+.++++.+.|| ||+++..
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYs 233 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYS 233 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEE
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEE
Confidence 73 2322111 0 135677778887 9987764
No 272
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.30 E-value=4.6e-07 Score=80.18 Aligned_cols=66 Identities=12% Similarity=-0.061 Sum_probs=48.0
Q ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCc--EEEEeCCCC-------------CCceeeecCCCCCCCCC----
Q 025071 106 DLKQRHFLFNESKALSIGARVGQEVAALKLVGVSD--SIGIDLVPR-------------PPLVIKGDFHAQPFDNG---- 166 (258)
Q Consensus 106 ~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~--v~GvD~s~~-------------~~~~~~aDa~~LPf~d~---- 166 (258)
.+++...+.++.+|||||||+|..+. ++. + .+ |+|+|+++. ...++++|+.++++++.
T Consensus 12 ~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~~ 88 (252)
T 1qyr_A 12 SIVSAINPQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKM 88 (252)
T ss_dssp HHHHHHCCCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHH
T ss_pred HHHHhcCCCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhccc
Confidence 33443345678899999999999999 765 3 36 999998631 12478899999988642
Q ss_pred -CeeEEEec
Q 025071 167 -TFDFEFSN 174 (258)
Q Consensus 167 -SFD~V~s~ 174 (258)
..|.|++|
T Consensus 89 ~~~~~vvsN 97 (252)
T 1qyr_A 89 GQPLRVFGN 97 (252)
T ss_dssp TSCEEEEEE
T ss_pred CCceEEEEC
Confidence 35677776
No 273
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.27 E-value=3.1e-07 Score=81.92 Aligned_cols=83 Identities=13% Similarity=0.105 Sum_probs=57.5
Q ss_pred CCCC--CEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC------------------------CCceeeecCCC-CCCCC
Q 025071 113 LFNE--SKALSIGARVGQEVAALKLVGVSDSIGIDLVPR------------------------PPLVIKGDFHA-QPFDN 165 (258)
Q Consensus 113 l~~~--~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~------------------------~~~~~~aDa~~-LPf~d 165 (258)
+.++ .+|||+|||+|..+..++..|. +|+|+|+++. ...++++|+.+ ++...
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~ 162 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDIT 162 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCS
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCc
Confidence 4556 7999999999999999998876 7999998752 12356777665 44333
Q ss_pred CCeeEEEec-cccccCChHHHHHHHHhcccCCc
Q 025071 166 GTFDFEFSN-VFDHALYPWKFVGEIERTLKPAG 197 (258)
Q Consensus 166 ~SFD~V~s~-~l~h~~~p~~~l~Ei~RVLKPGG 197 (258)
++||+|+++ .+.+ .....++++..|+|++.+
T Consensus 163 ~~fDvV~lDP~y~~-~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 163 PRPQVVYLDPMFPH-KQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp SCCSEEEECCCCCC-CCC-----HHHHHHHHHS
T ss_pred ccCCEEEEcCCCCC-cccchHHHHHHHHHHHhh
Confidence 479999997 4544 233456678888998866
No 274
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.24 E-value=7.3e-06 Score=74.53 Aligned_cols=98 Identities=16% Similarity=0.112 Sum_probs=63.5
Q ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC----CC-------c--eeeecCCCCCCCCCCeeEEEe
Q 025071 108 KQRHFLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR----PP-------L--VIKGDFHAQPFDNGTFDFEFS 173 (258)
Q Consensus 108 ~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~----~~-------~--~~~aDa~~LPf~d~SFD~V~s 173 (258)
.+...+.++.+|||+||++|.++..+.+. |...|+|+|+... +. . ....+.+-.-+..+.+|+|+|
T Consensus 74 ~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVls 153 (300)
T 3eld_A 74 HERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLC 153 (300)
T ss_dssp HHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEE
T ss_pred HHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEee
Confidence 33456778899999999999999999864 6667899998531 11 0 111122223355789999999
Q ss_pred ccccccCCh-------HHHHHHHHhcccCC-cEEEEEecc
Q 025071 174 NVFDHALYP-------WKFVGEIERTLKPA-GVCVLHVAL 205 (258)
Q Consensus 174 ~~l~h~~~p-------~~~l~Ei~RVLKPG-G~lii~v~~ 205 (258)
....+.-.+ ...+.=+.++|||| |.+++=+-.
T Consensus 154 D~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 154 DIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred cCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 632221111 12344457899999 998886543
No 275
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.23 E-value=7.7e-06 Score=79.95 Aligned_cols=132 Identities=12% Similarity=0.086 Sum_probs=80.0
Q ss_pred CEEEEECCCCCHHHHHHHhc--------C--------CCcEEEEeCCCC--------------CCce--eeecCCCCC-C
Q 025071 117 SKALSIGARVGQEVAALKLV--------G--------VSDSIGIDLVPR--------------PPLV--IKGDFHAQP-F 163 (258)
Q Consensus 117 ~~VLDIGcGtG~~~~~L~~~--------g--------~~~v~GvD~s~~--------------~~~~--~~aDa~~LP-f 163 (258)
.+|||.+||+|.++..+.+. + ...++|+|+++. ...+ .++|....| +
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 48999999999987654321 0 236899998642 1123 667765544 5
Q ss_pred CCCCeeEEEec---cccc-----------------------cC---Ch-HHHHHHHHhcccCCcEEEEEeccccCcCcCC
Q 025071 164 DNGTFDFEFSN---VFDH-----------------------AL---YP-WKFVGEIERTLKPAGVCVLHVALSRRADKYS 213 (258)
Q Consensus 164 ~d~SFD~V~s~---~l~h-----------------------~~---~p-~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~ 213 (258)
.+..||+|++| .... .+ +. -.+++.+.+.|||||++++++|..- -+
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~---L~- 401 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGS---MS- 401 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHH---HH-
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchh---hh-
Confidence 67899999997 2211 00 01 2578999999999999999886321 00
Q ss_pred CCCCCChhHHHHHhhcCc-eEEeeee-----cCCCCeE-EEEEEeCC
Q 025071 214 ANDLFSVKPLVKLFRESE-LVAVRKV-----DGFGLDT-EVVFRKKK 253 (258)
Q Consensus 214 ~~~~~s~~~l~~lf~~~~-~~~v~~v-----~g~~l~~-~~~f~K~~ 253 (258)
..--....+.+.+-+.+ +..+-.. .+.+.++ .++++|+.
T Consensus 402 -~~~~~~~~iRk~Lle~~~l~aII~LP~~lF~~t~i~t~Ilvl~K~k 447 (544)
T 3khk_A 402 -SNTNNEGEIRKTLVEQDLVECMVALPGQLFTNTQIPACIWFLTKDK 447 (544)
T ss_dssp -CCGGGHHHHHHHHHHTTCEEEEEECCTTBCCSCSSCEEEEEEESCC
T ss_pred -cCcchHHHHHHHHHhCCcHhEEEECCCCCCCCCCCCeEEEEEecCC
Confidence 00012456777665444 3333333 2334444 77788754
No 276
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.22 E-value=1e-06 Score=87.71 Aligned_cols=82 Identities=21% Similarity=0.201 Sum_probs=56.9
Q ss_pred CCEEEEECCCCCHHHHHHH---hcCCC--cEEEEeCCCC---------------CCceeeecCCCCCCCCCCeeEEEec-
Q 025071 116 ESKALSIGARVGQEVAALK---LVGVS--DSIGIDLVPR---------------PPLVIKGDFHAQPFDNGTFDFEFSN- 174 (258)
Q Consensus 116 ~~~VLDIGcGtG~~~~~L~---~~g~~--~v~GvD~s~~---------------~~~~~~aDa~~LPf~d~SFD~V~s~- 174 (258)
...|||||||+|-++..-. +.+.. +|++||.++. ...++.+|.+++..+ +.+|+|+|.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSEw 436 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSEL 436 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECCC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEEc
Confidence 3579999999999854322 22222 5899998642 234789999988766 579999995
Q ss_pred ---cccccCChHHHHHHHHhcccCCcEE
Q 025071 175 ---VFDHALYPWKFVGEIERTLKPAGVC 199 (258)
Q Consensus 175 ---~l~h~~~p~~~l~Ei~RVLKPGG~l 199 (258)
.+.+-..| .++.-..|.|||||.+
T Consensus 437 MG~fLl~E~ml-evL~Ardr~LKPgGim 463 (637)
T 4gqb_A 437 LGSFADNELSP-ECLDGAQHFLKDDGVS 463 (637)
T ss_dssp CBTTBGGGCHH-HHHHHHGGGEEEEEEE
T ss_pred CcccccccCCH-HHHHHHHHhcCCCcEE
Confidence 22222235 4666778999999964
No 277
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.19 E-value=1.2e-06 Score=81.96 Aligned_cols=86 Identities=16% Similarity=0.111 Sum_probs=62.9
Q ss_pred CCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC---------------------------C---CceeeecCCCCCC
Q 025071 115 NESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR---------------------------P---PLVIKGDFHAQPF 163 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~---------------------------~---~~~~~aDa~~LPf 163 (258)
++.+|||+|||+|..+..++.. |...|+++|+++. . ..+.++|+..+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 5789999999999999888764 5557999998642 1 2345667654421
Q ss_pred -CCCCeeEEEeccccccCChHHHHHHHHhcccCCcEEEEEe
Q 025071 164 -DNGTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 164 -~d~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~v 203 (258)
..++||+|+.+-. -.+..++..+.+.|||||+++++.
T Consensus 127 ~~~~~fD~I~lDP~---~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDPF---GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECCS---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCCC---CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 1458999997522 134678899999999999887763
No 278
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.18 E-value=1.7e-06 Score=77.75 Aligned_cols=60 Identities=12% Similarity=0.043 Sum_probs=45.8
Q ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCC---cEEEEeCCCC-----------CCceeeecCCCCCCCC
Q 025071 106 DLKQRHFLFNESKALSIGARVGQEVAALKLVGVS---DSIGIDLVPR-----------PPLVIKGDFHAQPFDN 165 (258)
Q Consensus 106 ~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~---~v~GvD~s~~-----------~~~~~~aDa~~LPf~d 165 (258)
.+++...+.++.+|||||||+|..+..|++.+.. +|+|+|+++. ...++++|+.++||++
T Consensus 33 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 33 AIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGS 106 (279)
T ss_dssp HHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGG
T ss_pred HHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhH
Confidence 3444434667889999999999999999876532 2999998742 2347899999999875
No 279
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.18 E-value=6.1e-06 Score=77.32 Aligned_cols=132 Identities=14% Similarity=0.115 Sum_probs=85.8
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCC--------CceeeecCCCCCCCCCCeeEEEeccccccCChHH
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRP--------PLVIKGDFHAQPFDNGTFDFEFSNVFDHALYPWK 184 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~--------~~~~~aDa~~LPf~d~SFD~V~s~~l~h~~~p~~ 184 (258)
+.+|.+|||+||++|..+..|.+.|. .|+|||..+-. ..++++|+.....+++.||+|+|... .+|..
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~---~~p~~ 284 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMV---EKPAK 284 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCS---SCHHH
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCC---CChHH
Confidence 67899999999999999999998874 89999986532 24678899988888889999999632 35788
Q ss_pred HHHHHHhcccCCc--EEEEEeccccCcCcCCCCCC-CChhHHHHHhhcCceE---EeeeecCCCCeEEEEEEe
Q 025071 185 FVGEIERTLKPAG--VCVLHVALSRRADKYSANDL-FSVKPLVKLFRESELV---AVRKVDGFGLDTEVVFRK 251 (258)
Q Consensus 185 ~l~Ei~RVLKPGG--~lii~v~~~~~~~~y~~~~~-~s~~~l~~lf~~~~~~---~v~~v~g~~l~~~~~f~K 251 (258)
.+.-+.+.|..|- .+++++-..- ...| +.+ .....+.+.|.+.|+. .+++.-...-.-+|..+|
T Consensus 285 ~~~l~~~wl~~~~~~~aI~~lKL~m-k~~~--~~l~~~~~~i~~~l~~~g~~~~l~akhL~hdReEiTV~~rk 354 (375)
T 4auk_A 285 VAALMAQWLVNGWCRETIFNLKLPM-KKRY--EEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVRR 354 (375)
T ss_dssp HHHHHHHHHHTTSCSEEEEEEECCS-SSHH--HHHHHHHHHHHHHHHHTTCCEEEEEECCTTCSSEEEEEEEE
T ss_pred hHHHHHHHHhccccceEEEEEEecc-cchH--HHHHHHHHHHHHHHHhcCcchhheehhhccCCcEEEEEEEe
Confidence 8888888887772 3444432110 0001 000 1234466677777653 334331111123666666
No 280
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.17 E-value=1.4e-06 Score=77.86 Aligned_cols=98 Identities=14% Similarity=0.124 Sum_probs=61.5
Q ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHhc-CC----CcEEEEe--CCCCC-----Cceee---e-cCCCCCCCCCCe
Q 025071 105 QDLKQRHFLFNESKALSIGARVGQEVAALKLV-GV----SDSIGID--LVPRP-----PLVIK---G-DFHAQPFDNGTF 168 (258)
Q Consensus 105 ~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g~----~~v~GvD--~s~~~-----~~~~~---a-Da~~LPf~d~SF 168 (258)
.++.+...++++.+|||+||++|.++.+.++. +. ..++|+| +.+.. ..+++ + |+.+++ ...+
T Consensus 63 ~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~~ 140 (269)
T 2px2_A 63 RWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYKP--SEIS 140 (269)
T ss_dssp HHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGSC--CCCC
T ss_pred HHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCCC--CCCC
Confidence 34555567889999999999999999988764 22 2355666 33321 12333 5 887643 5689
Q ss_pred eEEEeccccccCCh----H---HHHHHHHhcccCCc-EEEEEec
Q 025071 169 DFEFSNVFDHALYP----W---KFVGEIERTLKPAG-VCVLHVA 204 (258)
Q Consensus 169 D~V~s~~l~h~~~p----~---~~l~Ei~RVLKPGG-~lii~v~ 204 (258)
|+|+|..-....++ . .++.=+.++||||| .+++=+-
T Consensus 141 DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVF 184 (269)
T 2px2_A 141 DTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKIL 184 (269)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred CEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEEC
Confidence 99999521111111 1 13433448999999 7766443
No 281
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.17 E-value=3.6e-06 Score=84.59 Aligned_cols=103 Identities=16% Similarity=0.029 Sum_probs=67.3
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcC-------------------------------------------CC
Q 025071 103 FFQDLKQRHFLFNESKALSIGARVGQEVAALKLVG-------------------------------------------VS 139 (258)
Q Consensus 103 ~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g-------------------------------------------~~ 139 (258)
+...++......++..|||.+||+|.++...+..+ ..
T Consensus 178 LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~ 257 (703)
T 3v97_A 178 LAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSS 257 (703)
T ss_dssp HHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCc
Confidence 33444444445567899999999999876655321 13
Q ss_pred cEEEEeCCCCC----------------CceeeecCCCC--CCCCCCeeEEEec---cccccCC--hHH---HHHHHHhcc
Q 025071 140 DSIGIDLVPRP----------------PLVIKGDFHAQ--PFDNGTFDFEFSN---VFDHALY--PWK---FVGEIERTL 193 (258)
Q Consensus 140 ~v~GvD~s~~~----------------~~~~~aDa~~L--Pf~d~SFD~V~s~---~l~h~~~--p~~---~l~Ei~RVL 193 (258)
.++|+|+++.. ..+.++|+.++ |+.+++||+|++| ....... -.. .+.++.+.+
T Consensus 258 ~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~ 337 (703)
T 3v97_A 258 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQ 337 (703)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhh
Confidence 69999987521 24778898877 5556699999997 2111111 122 345566666
Q ss_pred cCCcEEEEEecc
Q 025071 194 KPAGVCVLHVAL 205 (258)
Q Consensus 194 KPGG~lii~v~~ 205 (258)
.|||.+++.++.
T Consensus 338 ~~g~~~~ilt~~ 349 (703)
T 3v97_A 338 FGGWNLSLFSAS 349 (703)
T ss_dssp CTTCEEEEEESC
T ss_pred CCCCeEEEEeCC
Confidence 789999998764
No 282
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.10 E-value=1.6e-06 Score=81.62 Aligned_cols=86 Identities=16% Similarity=0.115 Sum_probs=62.5
Q ss_pred CCCEEEEECCCCCHHHHHHHhc--CCCcEEEEeCCCC--------------C---CceeeecCCCCC--CCCCCeeEEEe
Q 025071 115 NESKALSIGARVGQEVAALKLV--GVSDSIGIDLVPR--------------P---PLVIKGDFHAQP--FDNGTFDFEFS 173 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~--g~~~v~GvD~s~~--------------~---~~~~~aDa~~LP--f~d~SFD~V~s 173 (258)
++.+|||++||+|..+..++.. |...|+++|+++. . ..++.+|+.++- -..+.||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 5789999999999998877763 4468999998642 1 345667764321 11468999998
Q ss_pred ccccccCChHHHHHHHHhcccCCcEEEEEe
Q 025071 174 NVFDHALYPWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 174 ~~l~h~~~p~~~l~Ei~RVLKPGG~lii~v 203 (258)
+-. -.+..++..+.+.|||||+++++.
T Consensus 132 DP~---g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DPF---GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CCS---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCC---cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 631 124568889999999999888764
No 283
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.08 E-value=2.1e-05 Score=71.57 Aligned_cols=99 Identities=17% Similarity=0.165 Sum_probs=67.7
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHh-cCCCcEEEEeCCCC----CC----------ceeee-cCCCCCCCCCC
Q 025071 104 FQDLKQRHFLFNESKALSIGARVGQEVAALKL-VGVSDSIGIDLVPR----PP----------LVIKG-DFHAQPFDNGT 167 (258)
Q Consensus 104 ~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~-~g~~~v~GvD~s~~----~~----------~~~~a-Da~~LPf~d~S 167 (258)
+.++.+...+.++.+|||+||++|.++.+.+. .|...|+|+|+-.. |. .+..+ |+..++- ..
T Consensus 83 L~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~ 160 (321)
T 3lkz_A 83 LRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS--EC 160 (321)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC--CC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC--CC
Confidence 34455556778889999999999999997664 56668999998532 11 13334 7767764 56
Q ss_pred eeEEEeccccccCChH-------HHHHHHHhcccCC-cEEEEEec
Q 025071 168 FDFEFSNVFDHALYPW-------KFVGEIERTLKPA-GVCVLHVA 204 (258)
Q Consensus 168 FD~V~s~~l~h~~~p~-------~~l~Ei~RVLKPG-G~lii~v~ 204 (258)
+|+|+|..-+...+|. +++.=+.+.|++| |-+++=+-
T Consensus 161 ~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl 205 (321)
T 3lkz_A 161 CDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVL 205 (321)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred CCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEc
Confidence 9999996325555553 2444446788999 87766544
No 284
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.00 E-value=3.1e-06 Score=76.93 Aligned_cols=63 Identities=17% Similarity=0.080 Sum_probs=48.1
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC--------------CCceeeecCCCCCC--C---CCCeeEE
Q 025071 112 FLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR--------------PPLVIKGDFHAQPF--D---NGTFDFE 171 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~--------------~~~~~~aDa~~LPf--~---d~SFD~V 171 (258)
.+.++.+|||+|||+|..+.++++. +...|+|+|.++. ...++++|+.++|. + .++||.|
T Consensus 23 ~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~V 102 (301)
T 1m6y_A 23 KPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGI 102 (301)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEE
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEE
Confidence 4567889999999999999988875 2358999998641 23478888888762 2 2689999
Q ss_pred Eec
Q 025071 172 FSN 174 (258)
Q Consensus 172 ~s~ 174 (258)
+++
T Consensus 103 l~D 105 (301)
T 1m6y_A 103 LMD 105 (301)
T ss_dssp EEE
T ss_pred EEc
Confidence 974
No 285
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.99 E-value=1.3e-05 Score=78.25 Aligned_cols=133 Identities=14% Similarity=0.119 Sum_probs=83.4
Q ss_pred CCCEEEEECCCCCHHHHHHHhc----CCCcEEEEeCCCC-----------------CCceeeecCCCC--C-CCCCCeeE
Q 025071 115 NESKALSIGARVGQEVAALKLV----GVSDSIGIDLVPR-----------------PPLVIKGDFHAQ--P-FDNGTFDF 170 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~----g~~~v~GvD~s~~-----------------~~~~~~aDa~~L--P-f~d~SFD~ 170 (258)
++.+|||.+||+|.++..+.+. +...++|+|+++. ...+.++|.... | +.+..||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 5679999999999987665442 2357999998642 113677887665 4 56789999
Q ss_pred EEec---ccccc------CC---------------hHHHHHHHHhccc-CCcEEEEEeccccCcCcCCCCCCCChhHHHH
Q 025071 171 EFSN---VFDHA------LY---------------PWKFVGEIERTLK-PAGVCVLHVALSRRADKYSANDLFSVKPLVK 225 (258)
Q Consensus 171 V~s~---~l~h~------~~---------------p~~~l~Ei~RVLK-PGG~lii~v~~~~~~~~y~~~~~~s~~~l~~ 225 (258)
|++| ...+. .+ --.++..+.+.|| |||++++.+|..- -+. .. ....+.+
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~---Lf~-~~--~~~~iRk 374 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGV---LFR-GN--AEGTIRK 374 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHH---HHC-CT--HHHHHHH
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchH---hhC-Cc--hhHHHHH
Confidence 9997 21110 01 0237899999999 9999999887421 000 00 1355767
Q ss_pred HhhcCc-eEEeeee-----cCCCCeE-EEEEEeCC
Q 025071 226 LFRESE-LVAVRKV-----DGFGLDT-EVVFRKKK 253 (258)
Q Consensus 226 lf~~~~-~~~v~~v-----~g~~l~~-~~~f~K~~ 253 (258)
.+-+.+ +..+-.. .+.+.+| .++|+|+.
T Consensus 375 ~Lle~~~l~~II~LP~~lF~~t~i~t~Ilvl~K~k 409 (542)
T 3lkd_A 375 ALLEEGAIDTVIGLPANIFFNTSIPTTVIILKKNR 409 (542)
T ss_dssp HHHHTTCEEEEEECCSSCSSSCCCCEEEEEECSSC
T ss_pred HHHhCCceeEEEEccccccCCCCCcEEEEEEecCC
Confidence 665444 3333333 2334444 67777754
No 286
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.94 E-value=6.6e-05 Score=66.54 Aligned_cols=96 Identities=18% Similarity=0.187 Sum_probs=64.5
Q ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHh-cCCCcEEEEeCCCC----C----------Cceeee-cCCCCCCCCCCe
Q 025071 105 QDLKQRHFLFNESKALSIGARVGQEVAALKL-VGVSDSIGIDLVPR----P----------PLVIKG-DFHAQPFDNGTF 168 (258)
Q Consensus 105 ~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~-~g~~~v~GvD~s~~----~----------~~~~~a-Da~~LPf~d~SF 168 (258)
.++.+...+.++.+|||+||++|.++.+.+. .|...|+|+|+-.. | ..+.++ |.+.++- ..+
T Consensus 68 ~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~--~~~ 145 (267)
T 3p8z_A 68 QWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPP--EKC 145 (267)
T ss_dssp HHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCC--CCC
T ss_pred HHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCC--ccc
Confidence 3445555778889999999999999997664 56678999997431 1 125566 7666653 669
Q ss_pred eEEEeccccccCChH-------HHHHHHHhcccCCcEEEEEe
Q 025071 169 DFEFSNVFDHALYPW-------KFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 169 D~V~s~~l~h~~~p~-------~~l~Ei~RVLKPGG~lii~v 203 (258)
|.|+|..-+...+|. ++++=+.+.|++ |-+++=+
T Consensus 146 DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KV 186 (267)
T 3p8z_A 146 DTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKV 186 (267)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEE
T ss_pred cEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEE
Confidence 999996333333433 244445688899 5555543
No 287
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.91 E-value=1.1e-05 Score=81.07 Aligned_cols=83 Identities=17% Similarity=0.167 Sum_probs=57.9
Q ss_pred CCEEEEECCCCCHHHHH-H---HhcC----------CCcEEEEeCCCC---------------CCceeeecCCCCCCC--
Q 025071 116 ESKALSIGARVGQEVAA-L---KLVG----------VSDSIGIDLVPR---------------PPLVIKGDFHAQPFD-- 164 (258)
Q Consensus 116 ~~~VLDIGcGtG~~~~~-L---~~~g----------~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~-- 164 (258)
+..|||||||+|-++.. + +..| ..+|+|||.++. ...++.+|.+++..+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 35799999999998642 2 1122 137999998641 245789999988774
Q ss_pred ---CCCeeEEEecccc----ccCChHHHHHHHHhcccCCcEE
Q 025071 165 ---NGTFDFEFSNVFD----HALYPWKFVGEIERTLKPAGVC 199 (258)
Q Consensus 165 ---d~SFD~V~s~~l~----h~~~p~~~l~Ei~RVLKPGG~l 199 (258)
.+..|+|+|.-+. +-..|+ .+.-+.|.|||||++
T Consensus 490 ~~~~ekVDIIVSElmGsfl~nEL~pe-~Ld~v~r~Lkp~Gi~ 530 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLGSFGDNELSPE-CLDGVTGFLKPTTIS 530 (745)
T ss_dssp HTTCCCCSEEEECCCBTTBGGGSHHH-HHHTTGGGSCTTCEE
T ss_pred cCCCCcccEEEEeccccccchhccHH-HHHHHHHhCCCCcEE
Confidence 5789999996332 222333 566678999999964
No 288
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.91 E-value=5e-05 Score=77.49 Aligned_cols=120 Identities=10% Similarity=-0.027 Sum_probs=72.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-C---CCcEEEEeCCCCCC---------------------ceeeecCCCC-CCCCCC
Q 025071 114 FNESKALSIGARVGQEVAALKLV-G---VSDSIGIDLVPRPP---------------------LVIKGDFHAQ-PFDNGT 167 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g---~~~v~GvD~s~~~~---------------------~~~~aDa~~L-Pf~d~S 167 (258)
.++.+|||.|||+|.++.++++. + ...++|+|+++... .+...|.... +...+.
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 45789999999999998887754 2 24699999875311 1222333332 335678
Q ss_pred eeEEEec--cccccCC----------------------------hHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCC
Q 025071 168 FDFEFSN--VFDHALY----------------------------PWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDL 217 (258)
Q Consensus 168 FD~V~s~--~l~h~~~----------------------------p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~ 217 (258)
||+|++| ....... -..+++.+.+.|||||++++.+|..- -.+.-
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~-----Lf~sg 474 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQY-----LTAQG 474 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHH-----HHCCS
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHH-----hccCC
Confidence 9999997 2111111 12356889999999999999887421 00000
Q ss_pred CChhHHHHHhh-cCceEEeeee
Q 025071 218 FSVKPLVKLFR-ESELVAVRKV 238 (258)
Q Consensus 218 ~s~~~l~~lf~-~~~~~~v~~v 238 (258)
-..+.+.+++- +..+..+-..
T Consensus 475 ~~~kkLRk~LLe~~~I~aIIdL 496 (878)
T 3s1s_A 475 NESKAFREFLVGNFGLEHIFLY 496 (878)
T ss_dssp HHHHHHHHHHTTTTCEEEEEEC
T ss_pred hHHHHHHHHHHhCCCeEEEEEC
Confidence 01355666654 4455554444
No 289
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.86 E-value=5.8e-05 Score=68.52 Aligned_cols=91 Identities=20% Similarity=0.205 Sum_probs=67.1
Q ss_pred CCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCCC--------------------CCceeeecCCCC-CCCCCCeeEE
Q 025071 114 FNESKALSIGARVGQEVAALKLV-GVSDSIGIDLVPR--------------------PPLVIKGDFHAQ-PFDNGTFDFE 171 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~~--------------------~~~~~~aDa~~L-Pf~d~SFD~V 171 (258)
+++.+||-||-|.|..++++.+. +..+|+.+|+.+. +..++.+|+.+. --.+++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 46789999999999999988875 4568999998531 124667776542 3356899999
Q ss_pred Eecccccc-----CChHHHHHHHHhcccCCcEEEEEec
Q 025071 172 FSNVFDHA-----LYPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 172 ~s~~l~h~-----~~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
+....+.. ..-..+++.+.|.|+|||+++.+..
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecC
Confidence 98533221 1235688999999999999998754
No 290
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.73 E-value=6.8e-06 Score=77.84 Aligned_cols=61 Identities=20% Similarity=0.308 Sum_probs=47.6
Q ss_pred CCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-----------------CCceeeecCCCC-CC-CCCCeeEEEe
Q 025071 113 LFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-----------------PPLVIKGDFHAQ-PF-DNGTFDFEFS 173 (258)
Q Consensus 113 l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-----------------~~~~~~aDa~~L-Pf-~d~SFD~V~s 173 (258)
+.++.+|||+|||+|..+.+|++.+ .+|+|+|+++. ...++++|+.+. +. ++++||+|++
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~g-~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSKA-SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred cCCCCEEEEeCCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 4458899999999999999998876 48999998641 124678888763 43 4578999999
Q ss_pred c
Q 025071 174 N 174 (258)
Q Consensus 174 ~ 174 (258)
+
T Consensus 170 D 170 (410)
T 3ll7_A 170 D 170 (410)
T ss_dssp C
T ss_pred C
Confidence 5
No 291
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.62 E-value=0.00017 Score=65.79 Aligned_cols=107 Identities=17% Similarity=0.146 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHH-hcCCCCCCEEEEECC------CCCHHHHHHHhcCC--CcEEEEeCCCCC---CceeeecCCCCC
Q 025071 95 RKVRVFSRFFQDLKQ-RHFLFNESKALSIGA------RVGQEVAALKLVGV--SDSIGIDLVPRP---PLVIKGDFHAQP 162 (258)
Q Consensus 95 ~~~~~~~~~~~~L~~-~~~l~~~~~VLDIGc------GtG~~~~~L~~~g~--~~v~GvD~s~~~---~~~~~aDa~~LP 162 (258)
-.+..|.++.+.|.. .-.++.+.+|||+|+ -+|.. .+++.+. ..|+++|+.+.. ..++++|..++.
T Consensus 88 ~nv~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~sda~~~IqGD~~~~~ 165 (344)
T 3r24_A 88 MNVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVH 165 (344)
T ss_dssp HHHHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGEE
T ss_pred eeHHHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccccCCCeEEEccccccc
Confidence 345557777776633 224567899999996 66663 4444432 379999997643 346889976543
Q ss_pred CCCCCeeEEEec-c--c-ccc-------CC-hHHHHHHHHhcccCCcEEEEEec
Q 025071 163 FDNGTFDFEFSN-V--F-DHA-------LY-PWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 163 f~d~SFD~V~s~-~--l-~h~-------~~-p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
. ...||+|+|. + . -+. .. -+.++.=+.++|+|||.+++=+-
T Consensus 166 ~-~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVF 218 (344)
T 3r24_A 166 T-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 218 (344)
T ss_dssp E-SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred c-CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEe
Confidence 3 4789999994 1 1 111 11 12344445668999999988653
No 292
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.55 E-value=0.00046 Score=62.15 Aligned_cols=102 Identities=11% Similarity=0.089 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHh----cC--CCcEEEEeCCCC--------------------
Q 025071 96 KVRVFSRFFQDLKQRHFLFNESKALSIGARVGQEVAALKL----VG--VSDSIGIDLVPR-------------------- 149 (258)
Q Consensus 96 ~~~~~~~~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~----~g--~~~v~GvD~s~~-------------------- 149 (258)
+...+..+++.+.+. ..++.||++||..|..+..+++ .| ..+++++|....
T Consensus 90 r~~~L~~l~~~v~~~---~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~ 166 (282)
T 2wk1_A 90 RLENIRQCVEDVIGN---NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRR 166 (282)
T ss_dssp HHHHHHHHHHHHHHT---TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGG
T ss_pred HHHHHHHHHHHHHhc---CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccc
Confidence 334444455544432 2457999999999998877653 22 357999995310
Q ss_pred -----------------------CCceeeecCC-CCC-CCCCCeeEEEeccccccCChHHHHHHHHhcccCCcEEEE
Q 025071 150 -----------------------PPLVIKGDFH-AQP-FDNGTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVL 201 (258)
Q Consensus 150 -----------------------~~~~~~aDa~-~LP-f~d~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii 201 (258)
...++.||+. .|| +++++||+|+..+ ++...-..++..+.+.|+|||++++
T Consensus 167 ~~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDa-D~y~~~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 167 NSVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDG-DLYESTWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp HHHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECC-CSHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred cccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcC-CccccHHHHHHHHHhhcCCCEEEEE
Confidence 1225566653 344 3467999999852 2222224678899999999998888
No 293
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.34 E-value=0.0012 Score=56.67 Aligned_cols=81 Identities=6% Similarity=-0.036 Sum_probs=54.7
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCC--------------C----CCceeeecCCC---------------C
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVP--------------R----PPLVIKGDFHA---------------Q 161 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~--------------~----~~~~~~aDa~~---------------L 161 (258)
+..+||++||| ..+..+++....+|+.+|.++ . ...++.+|+.+ +
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 56799999985 566677764225899999752 1 12356677543 2
Q ss_pred C--------C-CCCCeeEEEeccccccCChHHHHHHHHhcccCCcEEEE
Q 025071 162 P--------F-DNGTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVL 201 (258)
Q Consensus 162 P--------f-~d~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii 201 (258)
| . .+++||+|+..+ ......+.++.+.|+|||++++
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg----~k~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDG----RFRVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECS----SSHHHHHHHHHHHCSSCEEEEE
T ss_pred HHHhhhhhccccCCCCCEEEEeC----CCchhHHHHHHHhcCCCeEEEE
Confidence 3 2 247899999853 1123556778899999999966
No 294
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.32 E-value=0.00021 Score=66.45 Aligned_cols=91 Identities=21% Similarity=0.149 Sum_probs=63.0
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCC-CcEEEEeCCCCC---------------------CceeeecCCCCC-CCCCCe
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGV-SDSIGIDLVPRP---------------------PLVIKGDFHAQP-FDNGTF 168 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~-~~v~GvD~s~~~---------------------~~~~~aDa~~LP-f~d~SF 168 (258)
...+|.+|||++||+|.-+..|++.+. ..|+++|+++.. ..+...|+..++ +..+.|
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~f 224 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTY 224 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCE
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccC
Confidence 456889999999999999888887653 369999986421 124556666654 456799
Q ss_pred eEEEeccc---------c------ccCCh----------HHHHHHHHhcccCCcEEEEE
Q 025071 169 DFEFSNVF---------D------HALYP----------WKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 169 D~V~s~~l---------~------h~~~p----------~~~l~Ei~RVLKPGG~lii~ 202 (258)
|.|+..+= . +...+ .+.+....+.|||||+++-.
T Consensus 225 D~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYs 283 (359)
T 4fzv_A 225 DRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYS 283 (359)
T ss_dssp EEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEE
Confidence 99997311 1 00111 24567888999999998775
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.30 E-value=0.0021 Score=62.39 Aligned_cols=135 Identities=13% Similarity=0.083 Sum_probs=77.9
Q ss_pred CCCCEEEEECCCCCHHHHHHHh----cC----------CCcEEEEeCCCC---------------CCceeeecCCCCCCC
Q 025071 114 FNESKALSIGARVGQEVAALKL----VG----------VSDSIGIDLVPR---------------PPLVIKGDFHAQPFD 164 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~----~g----------~~~v~GvD~s~~---------------~~~~~~aDa~~LPf~ 164 (258)
.++.+|+|-+||+|.+.....+ .+ ...++|+|+.+. ...+..+|....|+.
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~ 295 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLR 295 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGG
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchh
Confidence 3466899999999998654322 11 125899998642 234566776665543
Q ss_pred ----CCCeeEEEec---ccccc-------C------Ch-HHHHHHHHhccc-------CCcEEEEEeccccCcCcCCCCC
Q 025071 165 ----NGTFDFEFSN---VFDHA-------L------YP-WKFVGEIERTLK-------PAGVCVLHVALSRRADKYSAND 216 (258)
Q Consensus 165 ----d~SFD~V~s~---~l~h~-------~------~p-~~~l~Ei~RVLK-------PGG~lii~v~~~~~~~~y~~~~ 216 (258)
+..||+|++| ...+. . +. ..++..+.+.|| |||++++++|..- -+. ..
T Consensus 296 ~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~---Lf~-~~ 371 (530)
T 3ufb_A 296 EMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGT---LFS-DG 371 (530)
T ss_dssp GCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHH---HHC-CT
T ss_pred hhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchh---hhc-cc
Confidence 3579999997 21110 0 11 235677888887 7999999987421 000 00
Q ss_pred CCChhHHHHHh-hcCceEEeeeec-----C-CCCeE-EEEEEeCCc
Q 025071 217 LFSVKPLVKLF-RESELVAVRKVD-----G-FGLDT-EVVFRKKKK 254 (258)
Q Consensus 217 ~~s~~~l~~lf-~~~~~~~v~~v~-----g-~~l~~-~~~f~K~~~ 254 (258)
....+.+.+ +++.+..+-... + .+.+| .++|+|.+.
T Consensus 372 --~~~~iRk~Lle~~~l~aII~LP~~~F~~~tgi~t~Il~~~K~~~ 415 (530)
T 3ufb_A 372 --ISARIKEELLKNFNLHTIVRLPEGVFAPYTDIAGNLLFFDRSGP 415 (530)
T ss_dssp --HHHHHHHHHHHHSEEEEEEECCTTTTTTTCCCCEEEEEEESSSC
T ss_pred --hHHHHHHHHhhcCEEEEEEECCcccCcCCCCCcEEEEEEECCCC
Confidence 123455544 455444444431 2 34555 677777543
No 296
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.30 E-value=0.00025 Score=66.53 Aligned_cols=90 Identities=12% Similarity=0.128 Sum_probs=61.8
Q ss_pred CCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------C--------------CceeeecCCCC----CCCCC
Q 025071 114 FNESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------P--------------PLVIKGDFHAQ----PFDNG 166 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------~--------------~~~~~aDa~~L----Pf~d~ 166 (258)
.++.+||-||-|.|..++++.+.+...|+.||+.+. + ..++.+|+.+. +=.++
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 356899999999999999988766678999998531 0 12344554311 11346
Q ss_pred CeeEEEecccccc--CCh---------HHHHHHHHhcccCCcEEEEEe
Q 025071 167 TFDFEFSNVFDHA--LYP---------WKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 167 SFD~V~s~~l~h~--~~p---------~~~l~Ei~RVLKPGG~lii~v 203 (258)
.||+|+....+.. .+| ..+++.+.|+|+|||+++.+.
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 8999998644321 122 356788999999999998864
No 297
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.91 E-value=0.00066 Score=61.33 Aligned_cols=36 Identities=14% Similarity=0.083 Sum_probs=31.1
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCC
Q 025071 112 FLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVP 148 (258)
Q Consensus 112 ~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~ 148 (258)
.+.+++.+||++||.|..+.++.+.+ ..|+|+|.++
T Consensus 19 ~~~~gg~~VD~T~G~GGHS~~il~~~-g~VigiD~Dp 54 (285)
T 1wg8_A 19 AVRPGGVYVDATLGGAGHARGILERG-GRVIGLDQDP 54 (285)
T ss_dssp TCCTTCEEEETTCTTSHHHHHHHHTT-CEEEEEESCH
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHCC-CEEEEEeCCH
Confidence 46778999999999999999998764 4899999865
No 298
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.84 E-value=0.0045 Score=56.42 Aligned_cols=117 Identities=21% Similarity=0.211 Sum_probs=73.5
Q ss_pred CCEEEEECCCCCHHHHH-HH---hcC-CC--cEEEEeCCCC------CC-----------------------ceeeecCC
Q 025071 116 ESKALSIGARVGQEVAA-LK---LVG-VS--DSIGIDLVPR------PP-----------------------LVIKGDFH 159 (258)
Q Consensus 116 ~~~VLDIGcGtG~~~~~-L~---~~g-~~--~v~GvD~s~~------~~-----------------------~~~~aDa~ 159 (258)
.-+|||+|-|||.++.. +. +.+ .. +.+.+|..+. +. .+..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 34799999999997532 21 222 12 3567774221 00 13445653
Q ss_pred C-CC-CCCCCeeEEEeccccccCChH----HHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceE
Q 025071 160 A-QP-FDNGTFDFEFSNVFDHALYPW----KFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELV 233 (258)
Q Consensus 160 ~-LP-f~d~SFD~V~s~~l~h~~~p~----~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~ 233 (258)
+ +| +++..||+|+...|.-..+|+ .++++|+|.++|||.++-.. +...+.+-+.++|+.
T Consensus 177 ~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYt---------------aag~VRR~L~~aGF~ 241 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYS---------------SSLSVRKSLLTLGFK 241 (308)
T ss_dssp HHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESC---------------CCHHHHHHHHHTTCE
T ss_pred HHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEe---------------CcHHHHHHHHHCCCE
Confidence 2 33 345689999997776556664 68899999999999876421 235677889999987
Q ss_pred EeeeecCCCCeEEEE
Q 025071 234 AVRKVDGFGLDTEVV 248 (258)
Q Consensus 234 ~v~~v~g~~l~~~~~ 248 (258)
|..+.|+|-+++++
T Consensus 242 -V~k~~G~g~KReml 255 (308)
T 3vyw_A 242 -VGSSREIGRKRKGT 255 (308)
T ss_dssp -EEEEECC---CEEE
T ss_pred -EEecCCCCCCCcee
Confidence 45567888886544
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.70 E-value=0.0018 Score=57.75 Aligned_cols=46 Identities=24% Similarity=0.282 Sum_probs=37.1
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCC
Q 025071 101 SRFFQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVP 148 (258)
Q Consensus 101 ~~~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~ 148 (258)
..+++.+++... .++..|||++||+|..+.++++.|. +++|+|+++
T Consensus 222 ~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~ 267 (297)
T 2zig_A 222 LELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVP 267 (297)
T ss_dssp HHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCH
T ss_pred HHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCH
Confidence 356666666543 5788999999999999999888884 899999875
No 300
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.50 E-value=0.015 Score=65.87 Aligned_cols=89 Identities=26% Similarity=0.256 Sum_probs=38.4
Q ss_pred CCCEEEEECCCCCHHHHHHH-hcC-----CCcEEEEeCCCCCC-----c-----eeee--cCCC-CCCCCCCeeEEEe-c
Q 025071 115 NESKALSIGARVGQEVAALK-LVG-----VSDSIGIDLVPRPP-----L-----VIKG--DFHA-QPFDNGTFDFEFS-N 174 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~-~~g-----~~~v~GvD~s~~~~-----~-----~~~a--Da~~-LPf~d~SFD~V~s-~ 174 (258)
+..+||+||.|+|..+..+. ..+ +.+.+-.|+++... . +... |... -+|..++||+|++ +
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~ 1319 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNC 1319 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEEC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEcc
Confidence 45799999999998644322 221 23466778764311 1 1111 2222 2567788999998 4
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEEe
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~v 203 (258)
+++...+....++++.+.|||||++++..
T Consensus 1320 vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1320 ALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp C--------------------CCEEEEEE
T ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 67655677888999999999999988764
No 301
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.30 E-value=0.052 Score=49.28 Aligned_cols=91 Identities=16% Similarity=0.129 Sum_probs=56.8
Q ss_pred HHHhcCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCC---------ceeeecCCCC-----CCCCCCeeE
Q 025071 107 LKQRHFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPP---------LVIKGDFHAQ-----PFDNGTFDF 170 (258)
Q Consensus 107 L~~~~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~---------~~~~aDa~~L-----Pf~d~SFD~ 170 (258)
+.+...+.++.+||-+|||. |..+..+++ .|...|+++|.++... .++..+..++ ...++.+|+
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 182 CINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp HHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEE
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcE
Confidence 33344577889999999875 666666665 5765699999764211 1111111110 011236999
Q ss_pred EEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 171 EFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 171 V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
|+..+= ....+++..+.|+|||++++.
T Consensus 262 vid~~g-----~~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 262 ALESTG-----SPEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EEECSC-----CHHHHHHHHHTEEEEEEEEEC
T ss_pred EEECCC-----CHHHHHHHHHHHhcCCEEEEe
Confidence 987421 134568899999999998775
No 302
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.94 E-value=0.092 Score=48.22 Aligned_cols=92 Identities=17% Similarity=0.098 Sum_probs=57.6
Q ss_pred hcCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCCc------eeeecCCCCCC---------CCCCeeEEE
Q 025071 110 RHFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPPL------VIKGDFHAQPF---------DNGTFDFEF 172 (258)
Q Consensus 110 ~~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~~------~~~aDa~~LPf---------~d~SFD~V~ 172 (258)
...+.++.+||-+|||. |..+..+++ .|..+|+++|.++.... ....|..+-.+ ....||+|+
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvi 259 (398)
T 2dph_A 180 SAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGV 259 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEE
Confidence 34577899999999976 777666665 57658999997642100 01112221111 122699999
Q ss_pred ecc-cc---------ccCChHHHHHHHHhcccCCcEEEEE
Q 025071 173 SNV-FD---------HALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 173 s~~-l~---------h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
..+ -. |. .+...+++..+.|+|||++++.
T Consensus 260 d~~g~~~~~~~~~~~~~-~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 260 DAVGFEAHGLGDEANTE-TPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp ECSCTTCBCSGGGTTSB-CTTHHHHHHHHHEEEEEEEECC
T ss_pred ECCCCcccccccccccc-ccHHHHHHHHHHHhcCCEEEEe
Confidence 752 11 11 2345678999999999998764
No 303
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.86 E-value=0.0086 Score=53.34 Aligned_cols=82 Identities=16% Similarity=0.146 Sum_probs=46.2
Q ss_pred ceeeecCCC-CC-CCCCCeeEEEec--cccc--c-----------------CChHHHHHHHHhcccCCcEEEEEeccccC
Q 025071 152 LVIKGDFHA-QP-FDNGTFDFEFSN--VFDH--A-----------------LYPWKFVGEIERTLKPAGVCVLHVALSRR 208 (258)
Q Consensus 152 ~~~~aDa~~-LP-f~d~SFD~V~s~--~l~h--~-----------------~~p~~~l~Ei~RVLKPGG~lii~v~~~~~ 208 (258)
.++++|+.+ ++ +++++||+|+++ .... . ......++|+.|+|||||.+++.+.....
T Consensus 23 ~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~~ 102 (297)
T 2zig_A 23 RLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVAV 102 (297)
T ss_dssp EEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEEE
T ss_pred EEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCcc
Confidence 356677654 32 467899999986 2111 0 01134678999999999999887652100
Q ss_pred c-CcCCCCCCCCh-hHHHHHhhcCceE
Q 025071 209 A-DKYSANDLFSV-KPLVKLFRESELV 233 (258)
Q Consensus 209 ~-~~y~~~~~~s~-~~l~~lf~~~~~~ 233 (258)
. ..+.....+.. ..+..++++.|+.
T Consensus 103 ~~~~~g~~~~~~~~~~l~~~~~~~Gf~ 129 (297)
T 2zig_A 103 ARRRFGRHLVFPLHADIQVRCRKLGFD 129 (297)
T ss_dssp ECC----EEEECHHHHHHHHHHHTTCE
T ss_pred ccccCCcccccccHHHHHHHHHHcCCe
Confidence 0 00000111122 4577788888754
No 304
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.76 E-value=0.018 Score=52.14 Aligned_cols=81 Identities=15% Similarity=0.297 Sum_probs=48.4
Q ss_pred ceeeecCCC-CC-CCCCCeeEEEec---cccc------------cCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCC
Q 025071 152 LVIKGDFHA-QP-FDNGTFDFEFSN---VFDH------------ALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSA 214 (258)
Q Consensus 152 ~~~~aDa~~-LP-f~d~SFD~V~s~---~l~h------------~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~ 214 (258)
.++++|+.+ |+ +++++||+|++. .... .......++|+.|+|||||.+++.+...... ....
T Consensus 16 ~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~-g~~~ 94 (323)
T 1boo_A 16 SMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMK-GVPA 94 (323)
T ss_dssp EEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEET-TEEE
T ss_pred eEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecC-CCcc
Confidence 456777643 33 568899999985 1110 0123567899999999999999976521000 0000
Q ss_pred CCCCChhHHHHHhhcCceE
Q 025071 215 NDLFSVKPLVKLFRESELV 233 (258)
Q Consensus 215 ~~~~s~~~l~~lf~~~~~~ 233 (258)
..++..+.+..++.+.|+.
T Consensus 95 ~~~~~~~~i~~~~~~~Gf~ 113 (323)
T 1boo_A 95 RSIYNFRVLIRMIDEVGFF 113 (323)
T ss_dssp ECCHHHHHHHHHHHTTCCE
T ss_pred cccchHHHHHHHHHhCCCE
Confidence 1123345666777777753
No 305
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.70 E-value=0.044 Score=47.76 Aligned_cols=46 Identities=15% Similarity=0.166 Sum_probs=36.5
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCC
Q 025071 101 SRFFQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVP 148 (258)
Q Consensus 101 ~~~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~ 148 (258)
..+++.+++.. ..++..|||..||+|..+.+..+.| .+++|+|+++
T Consensus 199 ~~l~~~~i~~~-~~~~~~vlD~f~GsGtt~~~a~~~g-r~~ig~e~~~ 244 (260)
T 1g60_A 199 RDLIERIIRAS-SNPNDLVLDCFMGSGTTAIVAKKLG-RNFIGCDMNA 244 (260)
T ss_dssp HHHHHHHHHHH-CCTTCEEEESSCTTCHHHHHHHHTT-CEEEEEESCH
T ss_pred HHHHHHHHHHh-CCCCCEEEECCCCCCHHHHHHHHcC-CeEEEEeCCH
Confidence 35666666544 3678899999999999998888887 4899999864
No 306
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.32 E-value=0.054 Score=48.95 Aligned_cols=87 Identities=15% Similarity=0.010 Sum_probs=54.3
Q ss_pred cCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCC---------Cceeeec---CCC----C-CCCCCCeeEE
Q 025071 111 HFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRP---------PLVIKGD---FHA----Q-PFDNGTFDFE 171 (258)
Q Consensus 111 ~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~---------~~~~~aD---a~~----L-Pf~d~SFD~V 171 (258)
..+.++.+||-+|+|. |..+..+++ .|..+|+++|.++.. ..++..+ ..+ + ...++.+|+|
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~v 246 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVT 246 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEE
Confidence 4577899999999875 666666665 576589999976421 1111111 000 0 0001469999
Q ss_pred EeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 172 FSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 172 ~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+..+= -...+.+..++|+|||+++..
T Consensus 247 id~~g-----~~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 247 IECTG-----AEASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp EECSC-----CHHHHHHHHHHSCTTCEEEEC
T ss_pred EECCC-----ChHHHHHHHHHhcCCCEEEEE
Confidence 87421 123567889999999998875
No 307
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.22 E-value=0.045 Score=50.20 Aligned_cols=92 Identities=18% Similarity=0.114 Sum_probs=58.6
Q ss_pred cCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCCc------eeeecCCCCC-C--------CCCCeeEEEe
Q 025071 111 HFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPPL------VIKGDFHAQP-F--------DNGTFDFEFS 173 (258)
Q Consensus 111 ~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~~------~~~aDa~~LP-f--------~d~SFD~V~s 173 (258)
..+.++.+||-+|||. |..+..+++ .|...|+++|.++.... ....|..+-+ + ....+|+|+.
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvid 260 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVD 260 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEEE
Confidence 4567899999999875 666666665 57657999997642110 0011211111 1 1236999997
Q ss_pred c-cc---------cccCChHHHHHHHHhcccCCcEEEEE
Q 025071 174 N-VF---------DHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 174 ~-~l---------~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
. .- .|..++...+++..+.|++||++++.
T Consensus 261 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 261 AVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp CCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 4 11 23445666789999999999998764
No 308
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.75 E-value=0.11 Score=47.19 Aligned_cols=91 Identities=20% Similarity=0.129 Sum_probs=55.7
Q ss_pred HHHhcCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCCce-------eeecCCC--CCC-------CCCCe
Q 025071 107 LKQRHFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPPLV-------IKGDFHA--QPF-------DNGTF 168 (258)
Q Consensus 107 L~~~~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~~~-------~~aDa~~--LPf-------~d~SF 168 (258)
+.+...+.++.+||-+|+|. |..+..+++ .|...|+++|.++..... ...|..+ -.+ .++.+
T Consensus 184 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 263 (374)
T 1cdo_A 184 AVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGV 263 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCC
Confidence 33344567889999999864 555555554 576579999976532110 1111111 011 12369
Q ss_pred eEEEeccccccCChHHHHHHHHhcccCC-cEEEEE
Q 025071 169 DFEFSNVFDHALYPWKFVGEIERTLKPA-GVCVLH 202 (258)
Q Consensus 169 D~V~s~~l~h~~~p~~~l~Ei~RVLKPG-G~lii~ 202 (258)
|+|+.++= ....+++..+.|+|| |++++.
T Consensus 264 D~vid~~g-----~~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 264 DFSLECVG-----NVGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp SEEEECSC-----CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCC-----CHHHHHHHHHHhhcCCcEEEEE
Confidence 99987421 134568899999999 998775
No 309
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.33 E-value=0.13 Score=46.57 Aligned_cols=91 Identities=20% Similarity=0.153 Sum_probs=55.6
Q ss_pred HHHhcCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCCce-------eeecCCC--CCC-------CCCCe
Q 025071 107 LKQRHFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPPLV-------IKGDFHA--QPF-------DNGTF 168 (258)
Q Consensus 107 L~~~~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~~~-------~~aDa~~--LPf-------~d~SF 168 (258)
+.+...+.++.+||-+|+|. |..+..+++ .|...|+++|.++..... ...|..+ -.+ .++.+
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGV 262 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCC
Confidence 33344567889999999864 555555554 575579999976432110 1111111 011 12369
Q ss_pred eEEEeccccccCChHHHHHHHHhcccCC-cEEEEE
Q 025071 169 DFEFSNVFDHALYPWKFVGEIERTLKPA-GVCVLH 202 (258)
Q Consensus 169 D~V~s~~l~h~~~p~~~l~Ei~RVLKPG-G~lii~ 202 (258)
|+|+.++= ....+++..+.|+|| |++++.
T Consensus 263 D~vid~~g-----~~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 263 DFSFEVIG-----RLDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp SEEEECSC-----CHHHHHHHHHHBCTTTCEEEEC
T ss_pred cEEEECCC-----CHHHHHHHHHHhhcCCcEEEEe
Confidence 99987421 134568899999999 998775
No 310
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.30 E-value=0.13 Score=46.62 Aligned_cols=91 Identities=15% Similarity=0.037 Sum_probs=55.7
Q ss_pred HHHhcCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCCce-------eeecCCC--CCC-------CCCCe
Q 025071 107 LKQRHFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPPLV-------IKGDFHA--QPF-------DNGTF 168 (258)
Q Consensus 107 L~~~~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~~~-------~~aDa~~--LPf-------~d~SF 168 (258)
+.+...+.++.+||-+|+|. |..+..+++ .|...|+++|.++..... ...|..+ -.+ .++.+
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 183 AVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGV 262 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCC
Confidence 33334577889999999864 555555554 576579999976532110 1111111 011 12379
Q ss_pred eEEEeccccccCChHHHHHHHHhcccCC-cEEEEE
Q 025071 169 DFEFSNVFDHALYPWKFVGEIERTLKPA-GVCVLH 202 (258)
Q Consensus 169 D~V~s~~l~h~~~p~~~l~Ei~RVLKPG-G~lii~ 202 (258)
|+|+..+= -...+++..+.|+|| |+++..
T Consensus 263 Dvvid~~g-----~~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 263 DYAVECAG-----RIETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp SEEEECSC-----CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCC-----CHHHHHHHHHHHhcCCCEEEEE
Confidence 99997421 134568899999999 998775
No 311
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.16 E-value=0.16 Score=46.17 Aligned_cols=91 Identities=14% Similarity=0.060 Sum_probs=55.6
Q ss_pred HHHhcCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCCce-------eeecCCC--CCC-------CCCCe
Q 025071 107 LKQRHFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPPLV-------IKGDFHA--QPF-------DNGTF 168 (258)
Q Consensus 107 L~~~~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~~~-------~~aDa~~--LPf-------~d~SF 168 (258)
+.+...+.++.+||-+|+|. |..+..+++ .|..+|+++|.++..... ...|..+ -.+ .++.+
T Consensus 187 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 187 AINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp HHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCc
Confidence 33344577889999999863 555555554 576579999976532110 1111111 011 12369
Q ss_pred eEEEeccccccCChHHHHHHHHhcccCC-cEEEEE
Q 025071 169 DFEFSNVFDHALYPWKFVGEIERTLKPA-GVCVLH 202 (258)
Q Consensus 169 D~V~s~~l~h~~~p~~~l~Ei~RVLKPG-G~lii~ 202 (258)
|+|+..+= -...+++..+.|+|| |++++.
T Consensus 267 Dvvid~~G-----~~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 267 DYSLDCAG-----TAQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SEEEESSC-----CHHHHHHHHHTBCTTTCEEEEC
T ss_pred cEEEECCC-----CHHHHHHHHHHhhcCCCEEEEE
Confidence 99987421 134568999999999 998764
No 312
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.15 E-value=0.13 Score=46.52 Aligned_cols=91 Identities=20% Similarity=0.143 Sum_probs=55.6
Q ss_pred HHHhcCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCCce-------eeecCCC--CCC-------CCCCe
Q 025071 107 LKQRHFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPPLV-------IKGDFHA--QPF-------DNGTF 168 (258)
Q Consensus 107 L~~~~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~~~-------~~aDa~~--LPf-------~d~SF 168 (258)
+.+...+.++.+||-+|+|. |..+..+++ .|...|+++|.++..... ...|..+ -.+ .++.+
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 261 (373)
T 2fzw_A 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGV 261 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCC
Confidence 33344567889999999864 555555554 576579999976532110 0111111 011 12369
Q ss_pred eEEEeccccccCChHHHHHHHHhcccCC-cEEEEE
Q 025071 169 DFEFSNVFDHALYPWKFVGEIERTLKPA-GVCVLH 202 (258)
Q Consensus 169 D~V~s~~l~h~~~p~~~l~Ei~RVLKPG-G~lii~ 202 (258)
|+|+.++= ....+++..+.|+|| |++++.
T Consensus 262 D~vid~~g-----~~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 262 DYSFECIG-----NVKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp SEEEECSC-----CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCC-----cHHHHHHHHHhhccCCcEEEEE
Confidence 99987421 134568899999999 998775
No 313
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.15 E-value=0.25 Score=44.93 Aligned_cols=88 Identities=16% Similarity=0.063 Sum_probs=55.5
Q ss_pred hcCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCC---------ceeeecCC-------C-CCCCCCCeeE
Q 025071 110 RHFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPP---------LVIKGDFH-------A-QPFDNGTFDF 170 (258)
Q Consensus 110 ~~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~---------~~~~aDa~-------~-LPf~d~SFD~ 170 (258)
...+.++.+||-+|+|. |..+..+++ .|...|+++|.++... .++..... + ....++.+|+
T Consensus 177 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dv 256 (370)
T 4ej6_A 177 LSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDV 256 (370)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCE
Confidence 34577899999999864 555555654 5766899999764211 11111000 0 0122347999
Q ss_pred EEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 171 EFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 171 V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
|+.++ --...+++..+.|+|||++++.
T Consensus 257 vid~~-----G~~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 257 VIECA-----GVAETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp EEECS-----CCHHHHHHHHHHEEEEEEEEEC
T ss_pred EEECC-----CCHHHHHHHHHHhccCCEEEEE
Confidence 99742 1134578999999999998875
No 314
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.09 E-value=0.15 Score=46.43 Aligned_cols=91 Identities=20% Similarity=0.226 Sum_probs=56.3
Q ss_pred HHHhcCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCC---------ceeeecCCCCCC-------CCCCe
Q 025071 107 LKQRHFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPP---------LVIKGDFHAQPF-------DNGTF 168 (258)
Q Consensus 107 L~~~~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~---------~~~~aDa~~LPf-------~d~SF 168 (258)
+.....+.++.+||-+|+|. |..+..+++ .|..+|+++|.++... .++......-.+ .++.+
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCC
Confidence 33445577889999999863 555555554 5766899999765321 111111001111 12379
Q ss_pred eEEEeccccccCChHHHHHHHHhcccCC-cEEEEE
Q 025071 169 DFEFSNVFDHALYPWKFVGEIERTLKPA-GVCVLH 202 (258)
Q Consensus 169 D~V~s~~l~h~~~p~~~l~Ei~RVLKPG-G~lii~ 202 (258)
|+|+..+= . ...+.+..+.|+|| |++++.
T Consensus 265 D~vid~~g----~-~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 265 DYSFECIG----N-VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp SEEEECSC----C-HHHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCC----C-HHHHHHHHHHhhccCCEEEEE
Confidence 99997421 1 34568899999997 998775
No 315
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=92.37 E-value=0.21 Score=44.15 Aligned_cols=82 Identities=11% Similarity=0.067 Sum_probs=52.9
Q ss_pred HhcCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCCc---------eeeecCCCCCCCCCCeeEEEecccc
Q 025071 109 QRHFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPPL---------VIKGDFHAQPFDNGTFDFEFSNVFD 177 (258)
Q Consensus 109 ~~~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~~---------~~~aDa~~LPf~d~SFD~V~s~~l~ 177 (258)
+...+.++.+||-+|+|. |..+..+++ .|. +|+++| ++.... ++. |.+++ .+.+|+|+.++=
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~-d~~~v---~~g~Dvv~d~~g- 208 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR-EPSQV---TQKYFAIFDAVN- 208 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES-SGGGC---CSCEEEEECC---
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc-CHHHh---CCCccEEEECCC-
Confidence 445677899999999963 556666654 576 899999 654321 221 33334 567999997421
Q ss_pred ccCChHHHHHHHHhcccCCcEEEEE
Q 025071 178 HALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 178 h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
.....+..+.|+|||+++..
T Consensus 209 -----~~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 209 -----SQNAAALVPSLKANGHIICI 228 (315)
T ss_dssp ----------TTGGGEEEEEEEEEE
T ss_pred -----chhHHHHHHHhcCCCEEEEE
Confidence 11125678999999998876
No 316
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=92.29 E-value=0.34 Score=43.38 Aligned_cols=81 Identities=14% Similarity=0.037 Sum_probs=53.7
Q ss_pred CCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCC---------ceeeecCCCCCCCCCCeeEEEeccccccC
Q 025071 112 FLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPP---------LVIKGDFHAQPFDNGTFDFEFSNVFDHAL 180 (258)
Q Consensus 112 ~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~---------~~~~aDa~~LPf~d~SFD~V~s~~l~h~~ 180 (258)
.+.++.+||-+|+|. |..+..+++ .|. +|+++|.++... .++ .+.+.+ . +.+|+|+..+= .
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~~~~~~--~-~~~D~vid~~g-~-- 244 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-TDPKQC--K-EELDFIISTIP-T-- 244 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-SSGGGC--C-SCEEEEEECCC-S--
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-CCHHHH--h-cCCCEEEECCC-c--
Confidence 567899999999875 666666655 575 899999875432 122 222222 2 27999997421 1
Q ss_pred ChHHHHHHHHhcccCCcEEEEE
Q 025071 181 YPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 181 ~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
...+.+..+.|+|||++++.
T Consensus 245 --~~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 245 --HYDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp --CCCHHHHHTTEEEEEEEEEC
T ss_pred --HHHHHHHHHHHhcCCEEEEE
Confidence 01357889999999998886
No 317
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=92.08 E-value=0.16 Score=45.75 Aligned_cols=88 Identities=13% Similarity=-0.020 Sum_probs=54.2
Q ss_pred hcCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCC--------ceeeecCCC---CC--------CCCCCe
Q 025071 110 RHFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPP--------LVIKGDFHA---QP--------FDNGTF 168 (258)
Q Consensus 110 ~~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~--------~~~~aDa~~---LP--------f~d~SF 168 (258)
...+.++.+||-+|+|. |..+..+++ .|...|+++|.++... .++...... -. .....+
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~ 253 (363)
T 3m6i_A 174 RAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEP 253 (363)
T ss_dssp HHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCC
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCC
Confidence 34577899999999864 556666655 5765599999764211 011000000 00 123468
Q ss_pred eEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 169 DFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 169 D~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
|+|+..+= -...+.+..+.|+|||++++.
T Consensus 254 Dvvid~~g-----~~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 254 AVALECTG-----VESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp SEEEECSC-----CHHHHHHHHHHSCTTCEEEEC
T ss_pred CEEEECCC-----ChHHHHHHHHHhcCCCEEEEE
Confidence 99987421 123568899999999998875
No 318
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.97 E-value=0.37 Score=43.20 Aligned_cols=89 Identities=10% Similarity=-0.088 Sum_probs=55.1
Q ss_pred HhcCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCCc-------eeeecCCCCCC--------CCCCeeEE
Q 025071 109 QRHFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPPL-------VIKGDFHAQPF--------DNGTFDFE 171 (258)
Q Consensus 109 ~~~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf--------~d~SFD~V 171 (258)
+...+.++.+||-+|+|. |..+..+++ .|...|+++|.++.... -...|..+-.+ ....+|+|
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v 239 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKV 239 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEE
Confidence 344577899999999874 556666665 57657999997642110 01111111111 12369999
Q ss_pred EeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 172 FSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 172 ~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+..+= . ...+++..+.|+|||+++..
T Consensus 240 ~d~~g----~-~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 240 VIAGG----D-VHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp EECSS----C-TTHHHHHHHHEEEEEEEEEC
T ss_pred EECCC----C-hHHHHHHHHHHhcCCEEEEe
Confidence 97421 1 13468899999999998875
No 319
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.90 E-value=0.29 Score=43.71 Aligned_cols=90 Identities=14% Similarity=0.073 Sum_probs=55.2
Q ss_pred HHHHhcCCCCCCEEEEECCC--CCHHHHHHHh-cCCCcEEEEeCCCCCCce-------eeecCCCCCC--------CCCC
Q 025071 106 DLKQRHFLFNESKALSIGAR--VGQEVAALKL-VGVSDSIGIDLVPRPPLV-------IKGDFHAQPF--------DNGT 167 (258)
Q Consensus 106 ~L~~~~~l~~~~~VLDIGcG--tG~~~~~L~~-~g~~~v~GvD~s~~~~~~-------~~aDa~~LPf--------~d~S 167 (258)
.+.+...+.++.+||-+||| .|..+..+++ .|. +|+++|.++..... ...|...-.+ ....
T Consensus 135 ~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 135 TCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSC
T ss_pred HHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCC
Confidence 34444567889999999997 4555555554 676 89999986543210 1112211111 1247
Q ss_pred eeEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 168 FDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 168 FD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+|+|+.++= .....+..+.|+|||+++..
T Consensus 214 ~Dvvid~~g------~~~~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 214 ADAAIDSIG------GPDGNELAFSLRPNGHFLTI 242 (340)
T ss_dssp EEEEEESSC------HHHHHHHHHTEEEEEEEEEC
T ss_pred CcEEEECCC------ChhHHHHHHHhcCCCEEEEE
Confidence 999997521 12234566899999998875
No 320
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=91.63 E-value=0.42 Score=43.33 Aligned_cols=81 Identities=25% Similarity=0.244 Sum_probs=52.1
Q ss_pred CCCEEEEEC-CC-CCHHHHHHHhc-CCCcEEEEeCCCCCC---------ceeee------cCCCCCCCCCCeeEEEeccc
Q 025071 115 NESKALSIG-AR-VGQEVAALKLV-GVSDSIGIDLVPRPP---------LVIKG------DFHAQPFDNGTFDFEFSNVF 176 (258)
Q Consensus 115 ~~~~VLDIG-cG-tG~~~~~L~~~-g~~~v~GvD~s~~~~---------~~~~a------Da~~LPf~d~SFD~V~s~~l 176 (258)
++.+||=+| +| .|..+..+++. +..+|+++|.++... .++.. ...++ ..+.+|+|+.++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~--~~~g~Dvvid~~- 247 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAAL--GLGAPAFVFSTT- 247 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTT--CSCCEEEEEECS-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHh--cCCCceEEEECC-
Confidence 678999998 55 46677777764 445899999753211 11110 01112 335799998742
Q ss_pred cccCChHHHHHHHHhcccCCcEEEEE
Q 025071 177 DHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 177 ~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
--...+++..+.|+|||++++.
T Consensus 248 ----g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 248 ----HTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp ----CHHHHHHHHHHHSCTTCEEEEC
T ss_pred ----CchhhHHHHHHHhcCCCEEEEE
Confidence 1234568899999999999875
No 321
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=91.06 E-value=0.49 Score=38.52 Aligned_cols=85 Identities=18% Similarity=0.160 Sum_probs=51.7
Q ss_pred cCCCCCCEEEEECC--CCCHHHHHH-HhcCCCcEEEEeCCCCCC-------ceeeecCCCCCC--------CCCCeeEEE
Q 025071 111 HFLFNESKALSIGA--RVGQEVAAL-KLVGVSDSIGIDLVPRPP-------LVIKGDFHAQPF--------DNGTFDFEF 172 (258)
Q Consensus 111 ~~l~~~~~VLDIGc--GtG~~~~~L-~~~g~~~v~GvD~s~~~~-------~~~~aDa~~LPf--------~d~SFD~V~ 172 (258)
..+.++.+||..|+ |.|..+..+ +..|. +|+++|.++... .-...|..+-.+ ....+|+|+
T Consensus 34 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi 112 (198)
T 1pqw_A 34 GRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVL 112 (198)
T ss_dssp SCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred hCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEE
Confidence 45678899999995 345544443 34675 799999753210 001112221111 124699999
Q ss_pred eccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 173 SNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 173 s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
.++= ...+++..+.|+|||+++..
T Consensus 113 ~~~g------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 113 NSLA------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp ECCC------THHHHHHHHTEEEEEEEEEC
T ss_pred ECCc------hHHHHHHHHHhccCCEEEEE
Confidence 7531 14568999999999998875
No 322
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=90.99 E-value=0.24 Score=44.14 Aligned_cols=86 Identities=9% Similarity=-0.008 Sum_probs=54.8
Q ss_pred cCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCCc-------eeeecCCCCCC------CCCCeeEEEecc
Q 025071 111 HFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPPL-------VIKGDFHAQPF------DNGTFDFEFSNV 175 (258)
Q Consensus 111 ~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf------~d~SFD~V~s~~ 175 (258)
..+.++.+||-.|||. |..+..+++ .|. +|+++|.++.... -...|..+-.+ ..+.+|+|+.++
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~ 240 (340)
T 3s2e_A 162 TDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTA 240 (340)
T ss_dssp TTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeC
Confidence 4567889999999975 777766665 576 8999997642110 01111111111 013689888742
Q ss_pred ccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 176 FDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 176 l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
- -...+++..+.|+|||+++..
T Consensus 241 g-----~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 241 V-----SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp C-----CHHHHHHHHHHEEEEEEEEEC
T ss_pred C-----CHHHHHHHHHHhccCCEEEEe
Confidence 1 134568899999999998875
No 323
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=90.96 E-value=0.31 Score=44.93 Aligned_cols=47 Identities=19% Similarity=0.082 Sum_probs=35.2
Q ss_pred CCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCCC------------CCCceeeecCCCCC
Q 025071 116 ESKALSIGARVGQEVAALKLV-GVSDSIGIDLVP------------RPPLVIKGDFHAQP 162 (258)
Q Consensus 116 ~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s~------------~~~~~~~aDa~~LP 162 (258)
+..|||||.|.|.++..|.+. ...+|+++++.+ ....++.+|+..+.
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDWS 118 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCHH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccchh
Confidence 578999999999999999875 235799999752 12346778885543
No 324
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=90.93 E-value=0.28 Score=45.40 Aligned_cols=122 Identities=11% Similarity=0.057 Sum_probs=71.3
Q ss_pred CEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------C-CceeeecCCCCCC--------CCCCeeEEEec----
Q 025071 117 SKALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------P-PLVIKGDFHAQPF--------DNGTFDFEFSN---- 174 (258)
Q Consensus 117 ~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------~-~~~~~aDa~~LPf--------~d~SFD~V~s~---- 174 (258)
.+++|+-||.|.+...+.+.|+..|.++|+.+. + ..++.+|+.++.. ....+|+|+.+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpPCQ 82 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPCQ 82 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCCCC
Confidence 479999999999999999889877889998642 1 2356788777642 34679999974
Q ss_pred cccc-----cCChH-HHHH---HHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEE--eeeec--CC
Q 025071 175 VFDH-----ALYPW-KFVG---EIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVA--VRKVD--GF 241 (258)
Q Consensus 175 ~l~h-----~~~p~-~~l~---Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~--v~~v~--g~ 241 (258)
.+.. ..++. ..+. ++.+.+||.-.++=-|+.- .+.+...-.+.+. .|.+.|..- ...++ .+
T Consensus 83 ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~~~v~ENV~gl-----~s~~~~~~~~~i~-~l~~~GY~v~~~~vl~a~dy 156 (376)
T 3g7u_A 83 GFSSIGKGNPDDSRNQLYMHFYRLVSELQPLFFLAENVPGI-----MQEKYSGIRNKAF-NLVSGDYDILDPIKVKASDY 156 (376)
T ss_dssp TTC-------CHHHHHHHHHHHHHHHHHCCSEEEEEECTTT-----TCGGGHHHHHHHH-HHHHTTEEECCCEEEEGGGG
T ss_pred CcccccCCCCCCchHHHHHHHHHHHHHhCCCEEEEecchHh-----hccCcHHHHHHHH-HHHcCCCccCcEEEEEHhhC
Confidence 2221 11222 2233 4555567743333323311 0111111245666 788887643 23333 56
Q ss_pred CCe
Q 025071 242 GLD 244 (258)
Q Consensus 242 ~l~ 244 (258)
|.+
T Consensus 157 GvP 159 (376)
T 3g7u_A 157 GAP 159 (376)
T ss_dssp TCS
T ss_pred CCC
Confidence 676
No 325
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=90.79 E-value=0.16 Score=45.64 Aligned_cols=90 Identities=11% Similarity=-0.051 Sum_probs=58.1
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC-------------CCceeeecCCC-CC---CCCCCeeEEEec-cc
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPR-------------PPLVIKGDFHA-QP---FDNGTFDFEFSN-VF 176 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~-------------~~~~~~aDa~~-LP---f~d~SFD~V~s~-~l 176 (258)
++..+||+=+|+|.++..+.+.+ .+++-+|.++. ...+.+.|+.+ +. -+...||+|+.. -.
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~~-d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRSQ-DRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCTT-SEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCC
T ss_pred cCCCceeEeCCcHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCC
Confidence 35568999999999998776644 78999997531 12355666432 21 123579999996 33
Q ss_pred cccCChHHHHHHHHh--cccCCcEEEEEecc
Q 025071 177 DHALYPWKFVGEIER--TLKPAGVCVLHVAL 205 (258)
Q Consensus 177 ~h~~~p~~~l~Ei~R--VLKPGG~lii~v~~ 205 (258)
+.-.+-.++++.+.+ .+.|+|+++++.|.
T Consensus 170 e~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi 200 (283)
T 2oo3_A 170 ERKEEYKEIPYAIKNAYSKFSTGLYCVWYPV 200 (283)
T ss_dssp CSTTHHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CCCcHHHHHHHHHHHhCccCCCeEEEEEEec
Confidence 322233344444443 56799999999874
No 326
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=90.79 E-value=0.29 Score=43.89 Aligned_cols=84 Identities=13% Similarity=0.001 Sum_probs=53.1
Q ss_pred cCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCC---------CceeeecCCC-CCC--------C---CCC
Q 025071 111 HFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRP---------PLVIKGDFHA-QPF--------D---NGT 167 (258)
Q Consensus 111 ~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~---------~~~~~aDa~~-LPf--------~---d~S 167 (258)
..+.++.+||-+|+|. |..+..+++ .|. +|+++|.++.. ..++ |..+ -.+ . .+.
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~--~~~~~~~~~~~i~~~~~~~~g~g 240 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTL--VVDPAKEEESSIIERIRSAIGDL 240 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEE--ECCTTTSCHHHHHHHHHHHSSSC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEE--cCcccccHHHHHHHHhccccCCC
Confidence 4567899999999874 555555554 575 59999975421 1111 1111 111 1 246
Q ss_pred eeEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 168 FDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 168 FD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+|+|+.++= ....+++..+.|+|||+++..
T Consensus 241 ~D~vid~~g-----~~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 241 PNVTIDCSG-----NEKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp CSEEEECSC-----CHHHHHHHHHHSCTTCEEEEC
T ss_pred CCEEEECCC-----CHHHHHHHHHHHhcCCEEEEE
Confidence 999987421 123568899999999998875
No 327
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=90.71 E-value=0.17 Score=44.95 Aligned_cols=92 Identities=18% Similarity=0.111 Sum_probs=56.4
Q ss_pred HHHHHHhcCCCCCCEEEEECC--CCCHHHHHHH-hcCCCcEEEEeCCCCCCc--------eeeecCCCCCC-------CC
Q 025071 104 FQDLKQRHFLFNESKALSIGA--RVGQEVAALK-LVGVSDSIGIDLVPRPPL--------VIKGDFHAQPF-------DN 165 (258)
Q Consensus 104 ~~~L~~~~~l~~~~~VLDIGc--GtG~~~~~L~-~~g~~~v~GvD~s~~~~~--------~~~aDa~~LPf-------~d 165 (258)
+..+.+...+.++.+||-.|| |.|..+..++ ..|. +|+++|.++.... -...|...-.+ ..
T Consensus 138 ~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 216 (336)
T 4b7c_A 138 YFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECP 216 (336)
T ss_dssp HHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCT
T ss_pred HHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcC
Confidence 333434456788999999998 3455555554 4676 8999997532110 01112111111 12
Q ss_pred CCeeEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 166 GTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 166 ~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+.+|+|+.++= ...+.+..+.|+|||++++.
T Consensus 217 ~~~d~vi~~~g------~~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 217 KGIDVFFDNVG------GEILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp TCEEEEEESSC------HHHHHHHHTTEEEEEEEEEC
T ss_pred CCceEEEECCC------cchHHHHHHHHhhCCEEEEE
Confidence 46999987521 23578899999999998875
No 328
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=90.58 E-value=0.25 Score=45.60 Aligned_cols=45 Identities=11% Similarity=0.038 Sum_probs=34.3
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhc-C-CCcEEEEeCCC
Q 025071 104 FQDLKQRHFLFNESKALSIGARVGQEVAALKLV-G-VSDSIGIDLVP 148 (258)
Q Consensus 104 ~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g-~~~v~GvD~s~ 148 (258)
+++.++.-.+.+++.++|..||.|..+.++.+. | ...|+|+|..+
T Consensus 46 l~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp 92 (347)
T 3tka_A 46 LDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDP 92 (347)
T ss_dssp THHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCH
T ss_pred HHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCH
Confidence 334444445678899999999999999988764 3 35799999864
No 329
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=90.37 E-value=0.17 Score=44.89 Aligned_cols=89 Identities=18% Similarity=0.201 Sum_probs=53.8
Q ss_pred HHHhcCCCCCCEEEEECC--CCCHHHHHHH-hcCCCcEEEEeCCCCCC-------ceeeecCCC-CCC-------CCCCe
Q 025071 107 LKQRHFLFNESKALSIGA--RVGQEVAALK-LVGVSDSIGIDLVPRPP-------LVIKGDFHA-QPF-------DNGTF 168 (258)
Q Consensus 107 L~~~~~l~~~~~VLDIGc--GtG~~~~~L~-~~g~~~v~GvD~s~~~~-------~~~~aDa~~-LPf-------~d~SF 168 (258)
+.+...+.++.+||-.|| |.|..+..++ ..|. +|+++|.++... .-...|..+ -.+ ..+.+
T Consensus 137 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 137 LLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp HHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCE
T ss_pred HHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCC
Confidence 333445678899999998 4455544443 4676 899999753210 001122221 010 11469
Q ss_pred eEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 169 DFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 169 D~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
|+++.++= ...+++..+.|+|||++++.
T Consensus 216 d~vi~~~g------~~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 216 DCYFDNVG------GEFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp EEEEESSC------HHHHHHHHTTEEEEEEEEEC
T ss_pred eEEEECCC------hHHHHHHHHHHhcCCEEEEE
Confidence 99998531 13468899999999998775
No 330
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=89.96 E-value=0.22 Score=44.59 Aligned_cols=83 Identities=17% Similarity=0.074 Sum_probs=53.9
Q ss_pred CCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCC---------ceeeecCCCCCC--------CCCCeeEEE
Q 025071 112 FLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPP---------LVIKGDFHAQPF--------DNGTFDFEF 172 (258)
Q Consensus 112 ~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~---------~~~~aDa~~LPf--------~d~SFD~V~ 172 (258)
.+.++.+||-+|+|. |..+..+++ .|..+|+++|.++... .++ |... .+ ....+|+|+
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i--~~~~-~~~~~v~~~t~g~g~d~v~ 244 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAV--KSGA-GAADAIRELTGGQGATAVF 244 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEE--ECST-THHHHHHHHHGGGCEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEE--cCCC-cHHHHHHHHhCCCCCeEEE
Confidence 467889999999875 666666665 4556899999764211 111 1111 11 123689998
Q ss_pred eccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 173 SNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 173 s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
..+= ....+++..+.|+|||++++.
T Consensus 245 d~~G-----~~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 245 DFVG-----AQSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp ESSC-----CHHHHHHHHHHEEEEEEEEEC
T ss_pred ECCC-----CHHHHHHHHHHHhcCCEEEEE
Confidence 7421 133678999999999998875
No 331
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=89.82 E-value=0.72 Score=41.44 Aligned_cols=80 Identities=24% Similarity=0.235 Sum_probs=50.6
Q ss_pred CEEEEECCCC-CHHH-HHHH-h-cCCCcEEEEeCCCC---CCc-------eeeecCCCCCCC-----CCCeeEEEecccc
Q 025071 117 SKALSIGARV-GQEV-AALK-L-VGVSDSIGIDLVPR---PPL-------VIKGDFHAQPFD-----NGTFDFEFSNVFD 177 (258)
Q Consensus 117 ~~VLDIGcGt-G~~~-~~L~-~-~g~~~v~GvD~s~~---~~~-------~~~aDa~~LPf~-----d~SFD~V~s~~l~ 177 (258)
.+||-+|+|. |..+ ..++ + .|..+|+++|.++. ... -.. |..+-.+. ++.||+|+..+=
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~i~~~~gg~Dvvid~~g- 251 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQTPVEDVPDVYEQMDFIYEATG- 251 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTTSCGGGHHHHSCCEEEEEECSC-
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCccCHHHHHHhCCCCCEEEECCC-
Confidence 8999999853 5556 6666 5 57644999998754 211 111 22221111 136999987421
Q ss_pred ccCChHHHHHHHHhcccCCcEEEEE
Q 025071 178 HALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 178 h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
. ...+++..+.|+|||+++..
T Consensus 252 ---~-~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 252 ---F-PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp ---C-HHHHHHHHHHEEEEEEEEEC
T ss_pred ---C-hHHHHHHHHHHhcCCEEEEE
Confidence 1 23568899999999998775
No 332
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=89.59 E-value=0.1 Score=47.27 Aligned_cols=87 Identities=10% Similarity=-0.039 Sum_probs=53.6
Q ss_pred HhcCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCC---------ceeeecCCCCC------CCCCCeeEE
Q 025071 109 QRHFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPP---------LVIKGDFHAQP------FDNGTFDFE 171 (258)
Q Consensus 109 ~~~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~---------~~~~aDa~~LP------f~d~SFD~V 171 (258)
+...+.++.+||-+|+|. |..+..+++ .|. +|+++|.++... .++..+..++. .....+|+|
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEE
Confidence 344577899999999774 555555554 575 899999763211 11211101100 023379999
Q ss_pred EeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 172 FSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 172 ~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+.++= ...+.+..+.|+|||++++.
T Consensus 262 id~~g------~~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 262 LEIAG------GAGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp EEETT------SSCHHHHHHHEEEEEEEEEE
T ss_pred EECCC------hHHHHHHHHHhhcCCEEEEE
Confidence 97421 12357888999999998876
No 333
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=89.53 E-value=0.18 Score=45.92 Aligned_cols=120 Identities=15% Similarity=0.134 Sum_probs=68.1
Q ss_pred CEEEEECCCCCHHHHHHHhcC--CCcEEEEeCCCC---------C-CceeeecCCCCCC---CCCCeeEEEec----ccc
Q 025071 117 SKALSIGARVGQEVAALKLVG--VSDSIGIDLVPR---------P-PLVIKGDFHAQPF---DNGTFDFEFSN----VFD 177 (258)
Q Consensus 117 ~~VLDIGcGtG~~~~~L~~~g--~~~v~GvD~s~~---------~-~~~~~aDa~~LPf---~d~SFD~V~s~----~l~ 177 (258)
.+|+|+-||.|.....+.+.| +..|.++|+++. + ..+..+|+.++.- +...+|+|+.+ .+.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~fS 82 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFT 82 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC-----
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcchh
Confidence 479999999999999998888 457899998642 1 2356788877642 12269999985 222
Q ss_pred c------cCChH-HHHHHHHhcc---c--CCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceE-Eeeeec--CCC
Q 025071 178 H------ALYPW-KFVGEIERTL---K--PAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELV-AVRKVD--GFG 242 (258)
Q Consensus 178 h------~~~p~-~~l~Ei~RVL---K--PGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~-~v~~v~--g~~ 242 (258)
. ..++. ..+.|+.|++ + |--.++=-|+.-. . -...+.+.+.|.+.|.. ....++ .+|
T Consensus 83 ~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~l~-----~---~~~~~~i~~~l~~~GY~v~~~vl~a~~~G 154 (343)
T 1g55_A 83 RIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFE-----V---SSTRDLLIQTIENCGFQYQEFLLSPTSLG 154 (343)
T ss_dssp -------------CHHHHHHHHGGGCSSCCSEEEEEEETTGG-----G---SHHHHHHHHHHHHTTEEEEEEEECGGGGT
T ss_pred hcCCcCCccCccchHHHHHHHHHHHhcCCCCEEEEeCCcccc-----C---HHHHHHHHHHHHHCCCeeEEEEEEHHHCC
Confidence 1 12222 2344555554 4 5423222243110 0 01246678888888853 333343 566
Q ss_pred Ce
Q 025071 243 LD 244 (258)
Q Consensus 243 l~ 244 (258)
.+
T Consensus 155 vP 156 (343)
T 1g55_A 155 IP 156 (343)
T ss_dssp CS
T ss_pred CC
Confidence 66
No 334
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=89.31 E-value=0.89 Score=44.55 Aligned_cols=68 Identities=22% Similarity=0.349 Sum_probs=45.0
Q ss_pred CCCeeEEEeccccccCCh----HHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceEEeeeecC
Q 025071 165 NGTFDFEFSNVFDHALYP----WKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELVAVRKVDG 240 (258)
Q Consensus 165 d~SFD~V~s~~l~h~~~p----~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~~v~~v~g 240 (258)
+..||+++...|....+| ..++++|+|+++|||.+.-.. ....+.+.+.++|+. +....+
T Consensus 177 ~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~---------------~~~~vr~~L~~aGf~-v~~~~~ 240 (676)
T 3ps9_A 177 NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT---------------SAGFVRRGLQDAGFT-MQKRKG 240 (676)
T ss_dssp TTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC---------------CCHHHHHHHHHHTCE-EEEEEC
T ss_pred CCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc---------------CcHHHHHHHHhCCeE-EEeccc
Confidence 468999999766544455 357799999999999876422 124567777777764 334445
Q ss_pred CCCeEEEE
Q 025071 241 FGLDTEVV 248 (258)
Q Consensus 241 ~~l~~~~~ 248 (258)
++-.+++.
T Consensus 241 ~g~krem~ 248 (676)
T 3ps9_A 241 FGRKREML 248 (676)
T ss_dssp STTCCEEE
T ss_pred cccchhhh
Confidence 56555443
No 335
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=89.15 E-value=0.14 Score=46.02 Aligned_cols=83 Identities=23% Similarity=0.239 Sum_probs=52.0
Q ss_pred CCCCCCCeeEEEecc-----ccccC-------ChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhh
Q 025071 161 QPFDNGTFDFEFSNV-----FDHAL-------YPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFR 228 (258)
Q Consensus 161 LPf~d~SFD~V~s~~-----l~h~~-------~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~ 228 (258)
+|-.-+.||+|+.+. .||.. .-+..-+...+.|||||.+++. .|...|.-|+.-+..+.+
T Consensus 205 ~P~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~--------aYGyADR~SE~vV~alAR 276 (324)
T 3trk_A 205 LPATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIR--------AYGYADRTSERVICVLGR 276 (324)
T ss_dssp CCGGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEE--------ECCCCSHHHHHHHHHHHT
T ss_pred CCCcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEE--------eecccccchHHHHHHHHh
Confidence 343347999999961 34433 1122346788999999999885 344455556666778888
Q ss_pred cCceEEeeeecCCCCeE--EEEEEe
Q 025071 229 ESELVAVRKVDGFGLDT--EVVFRK 251 (258)
Q Consensus 229 ~~~~~~v~~v~g~~l~~--~~~f~K 251 (258)
+.-.+++-+-..-.-.| -++|.+
T Consensus 277 kF~~~rv~~P~cv~snTEv~~vF~~ 301 (324)
T 3trk_A 277 KFRSSRALKPPCVTSNTEMFFLFSN 301 (324)
T ss_dssp TEEEEEEECCTTCCBTTCEEEEEEE
T ss_pred hheeeeeecCccccccceEEEEEEe
Confidence 77777766653323233 455655
No 336
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=88.76 E-value=0.44 Score=42.54 Aligned_cols=87 Identities=13% Similarity=-0.041 Sum_probs=52.0
Q ss_pred hcCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCC----ce--eeecCCCCCCC-------CCCeeEEEec
Q 025071 110 RHFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPP----LV--IKGDFHAQPFD-------NGTFDFEFSN 174 (258)
Q Consensus 110 ~~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~----~~--~~aDa~~LPf~-------d~SFD~V~s~ 174 (258)
...+ ++.+||-+|+|. |..+..+++ .|..+|+++|.++... .+ ...|..+-.+. .+.+|+|+..
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D~vid~ 238 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEF 238 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHHHSSCEEEEEEC
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHhcCCCCCEEEEC
Confidence 3345 889999999853 555555554 5754799999753211 01 01111111110 2368999874
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+= ....+++..+.|+|||+++..
T Consensus 239 ~g-----~~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 239 SG-----NEAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp SC-----CHHHHHHHHHHEEEEEEEEEC
T ss_pred CC-----CHHHHHHHHHHHhcCCEEEEE
Confidence 21 124568899999999988765
No 337
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=88.67 E-value=8 Score=34.91 Aligned_cols=46 Identities=9% Similarity=0.067 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhc-CCCcEEEEeC
Q 025071 98 RVFSRFFQDLKQRHFLFNESKALSIGARVGQEVAALKLV-GVSDSIGIDL 146 (258)
Q Consensus 98 ~~~~~~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~ 146 (258)
..+..+++..++. .+...|+.+|||.......|... +...++-||.
T Consensus 83 ~~iD~~v~~fl~~---~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~ 129 (334)
T 1rjd_A 83 VGIDAAILEFLVA---NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY 129 (334)
T ss_dssp HHHHHHHHHHHHH---CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC
T ss_pred HHHHHHHHHHHHH---CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC
Confidence 3444555555443 24578999999999988888753 3346788884
No 338
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=88.48 E-value=0.27 Score=48.51 Aligned_cols=37 Identities=24% Similarity=0.340 Sum_probs=27.1
Q ss_pred CCCeeEEEeccccccCCh----HHHHHHHHhcccCCcEEEE
Q 025071 165 NGTFDFEFSNVFDHALYP----WKFVGEIERTLKPAGVCVL 201 (258)
Q Consensus 165 d~SFD~V~s~~l~h~~~p----~~~l~Ei~RVLKPGG~lii 201 (258)
++.||+++...|.-..+| ..++.++.|+++|||.+.-
T Consensus 169 ~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 169 NNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp TTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred CCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 578999998655433334 4678999999999998754
No 339
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=88.41 E-value=0.24 Score=48.58 Aligned_cols=83 Identities=22% Similarity=0.285 Sum_probs=53.1
Q ss_pred CCCCCCCCeeEEEecc-----ccccCC-------hHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHh
Q 025071 160 AQPFDNGTFDFEFSNV-----FDHALY-------PWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLF 227 (258)
Q Consensus 160 ~LPf~d~SFD~V~s~~-----l~h~~~-------p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf 227 (258)
-+| ++..||+|+.+. .||..+ -+..-....+.|||||.+++. .|...|..|+.-+..+.
T Consensus 215 G~p-~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~--------~YGyADr~sE~vv~ala 285 (670)
T 4gua_A 215 GFP-PQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVK--------SYGYADRNSEDVVTALA 285 (670)
T ss_dssp CCC-CCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEE--------ESCCCSHHHHHHHHHHH
T ss_pred CCC-CCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEE--------EeeccccchHHHHHHHH
Confidence 356 457999999961 344331 122347788999999999885 34445555667778888
Q ss_pred hcCceEEeeeecCC--CCeEEEEEEe
Q 025071 228 RESELVAVRKVDGF--GLDTEVVFRK 251 (258)
Q Consensus 228 ~~~~~~~v~~v~g~--~l~~~~~f~K 251 (258)
++....++-.-... .-...++|+-
T Consensus 286 RkF~~~rv~~p~~~~snTEv~~~f~~ 311 (670)
T 4gua_A 286 RKFVRVSAARPDCVSSNTEMYLIFRQ 311 (670)
T ss_dssp HTEEEEEEECCTTCSBTTCEEEEEEE
T ss_pred hheeeeeeeCCCccccCceEEEEEEe
Confidence 88877776654322 2224566665
No 340
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=88.18 E-value=0.97 Score=40.01 Aligned_cols=122 Identities=16% Similarity=0.130 Sum_probs=74.8
Q ss_pred EEEEECCCCCHHHHHHHhcCCCcEEEEeCCCC---------CCceeeecCCCCCCCC-CCeeEEEec----ccc------
Q 025071 118 KALSIGARVGQEVAALKLVGVSDSIGIDLVPR---------PPLVIKGDFHAQPFDN-GTFDFEFSN----VFD------ 177 (258)
Q Consensus 118 ~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~---------~~~~~~aDa~~LPf~d-~SFD~V~s~----~l~------ 177 (258)
+|||+=||.|.+...|.+.|+..+.++|+.+. +..+..+|+.++...+ ..+|+++.+ .+.
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag~~~ 81 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGGSLR 81 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETTEEC
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCCCcc
Confidence 79999999999999999999877889998764 3346778877765322 358998874 221
Q ss_pred ccCChH-HHHHH---HHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceE-Eeeeec--CCCCe
Q 025071 178 HALYPW-KFVGE---IERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELV-AVRKVD--GFGLD 244 (258)
Q Consensus 178 h~~~p~-~~l~E---i~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~-~v~~v~--g~~l~ 244 (258)
...|+. ..+.| +.+.+||--.++=-|+.- .+.++....+.+.+.|.+.|.. ....++ .+|.+
T Consensus 82 g~~d~R~~L~~~~~r~i~~~~Pk~~~~ENV~gl-----~~~~~~~~~~~i~~~l~~~GY~v~~~vlna~~yGvP 150 (331)
T 3ubt_Y 82 GIDDPRGKLFYEYIRILKQKKPIFFLAENVKGM-----MAQRHNKAVQEFIQEFDNAGYDVHIILLNANDYGVA 150 (331)
T ss_dssp CTTCGGGHHHHHHHHHHHHHCCSEEEEEECCGG-----GGCTTSHHHHHHHHHHHHHTEEEEEEEEEGGGTTCS
T ss_pred CCCCchhHHHHHHHHHHhccCCeEEEeeeeccc-----ccccccchhhhhhhhhccCCcEEEEEecccccCCCC
Confidence 123443 33444 445568853332224311 0111222356778888888853 444443 67777
No 341
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=88.16 E-value=0.28 Score=44.67 Aligned_cols=85 Identities=16% Similarity=0.120 Sum_probs=51.4
Q ss_pred CCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCC---------ceeeec---CCC----C-CC-CCCCeeEEE
Q 025071 113 LFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPP---------LVIKGD---FHA----Q-PF-DNGTFDFEF 172 (258)
Q Consensus 113 l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~---------~~~~aD---a~~----L-Pf-~d~SFD~V~ 172 (258)
+.++.+||-+|+|. |..+..+++ .|..+|+++|.++... .++..+ ..+ + .. ....+|+|+
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvi 272 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFIL 272 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEE
Confidence 67889999999763 555555554 5644899999754211 111111 000 0 00 123699999
Q ss_pred eccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 173 SNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 173 s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
.++= . ...+++..+.|+|||+++..
T Consensus 273 d~~g----~-~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 273 EATG----D-SRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp ECSS----C-TTHHHHHHHHEEEEEEEEEC
T ss_pred ECCC----C-HHHHHHHHHHHhcCCEEEEE
Confidence 7421 1 13467899999999998775
No 342
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=87.99 E-value=0.3 Score=43.52 Aligned_cols=87 Identities=16% Similarity=0.108 Sum_probs=53.4
Q ss_pred HhcCCCCCCEEEEECC--CCCHHHHHHH-hcCCCcEEEEeCCCCCC--------ceeeecCCCC-CC-------CCCCee
Q 025071 109 QRHFLFNESKALSIGA--RVGQEVAALK-LVGVSDSIGIDLVPRPP--------LVIKGDFHAQ-PF-------DNGTFD 169 (258)
Q Consensus 109 ~~~~l~~~~~VLDIGc--GtG~~~~~L~-~~g~~~v~GvD~s~~~~--------~~~~aDa~~L-Pf-------~d~SFD 169 (258)
+...+.++.+||-.|| |.|..+..++ ..|. +|+++|.++... .-...|..+- .+ ..+.+|
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d 227 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGID 227 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEE
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCc
Confidence 3345678899999998 3555555544 4675 799999753210 0011122111 11 114699
Q ss_pred EEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 170 FEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 170 ~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+|+.++= ...+++..+.|+|||++++.
T Consensus 228 ~vi~~~g------~~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 228 IYFENVG------GKMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp EEEESSC------HHHHHHHHTTEEEEEEEEEC
T ss_pred EEEECCC------HHHHHHHHHHHhcCCEEEEE
Confidence 9998521 13578899999999998775
No 343
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=87.92 E-value=0.4 Score=42.91 Aligned_cols=86 Identities=16% Similarity=-0.010 Sum_probs=52.5
Q ss_pred cCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCCc-------eeeecCCCCCC--------CCCCeeEEEe
Q 025071 111 HFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPPL-------VIKGDFHAQPF--------DNGTFDFEFS 173 (258)
Q Consensus 111 ~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf--------~d~SFD~V~s 173 (258)
..+ ++.+||-+|+|. |..+..+++ .|..+|+++|.++.... -...|...-.+ ....+|+|+.
T Consensus 164 ~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid 242 (348)
T 2d8a_A 164 GPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLE 242 (348)
T ss_dssp SCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred cCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 345 889999999963 555555554 57547999997642110 01112111111 1236999997
Q ss_pred ccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 174 NVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 174 ~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
++= ....+++..+.|+|||+++..
T Consensus 243 ~~g-----~~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 243 FSG-----APKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp CSC-----CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCC-----CHHHHHHHHHHHhcCCEEEEE
Confidence 521 134568899999999998775
No 344
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.84 E-value=0.3 Score=44.42 Aligned_cols=82 Identities=20% Similarity=0.184 Sum_probs=52.0
Q ss_pred CCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCC---------ceeee---c-CCCCCCCCCCeeEEEeccc
Q 025071 112 FLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPP---------LVIKG---D-FHAQPFDNGTFDFEFSNVF 176 (258)
Q Consensus 112 ~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~---------~~~~a---D-a~~LPf~d~SFD~V~s~~l 176 (258)
.+.++.+||-+|+|. |..+..+++ .|. +|+++|.++... .++.. + ..++. +.+|+|+..+=
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~---~g~Dvvid~~g 266 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHL---KSFDFILNTVA 266 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTT---TCEEEEEECCS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhh---cCCCEEEECCC
Confidence 467889999999874 556666655 575 699999764321 11111 0 11121 47999997421
Q ss_pred cccCChHHHHHHHHhcccCCcEEEEE
Q 025071 177 DHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 177 ~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
. ...+++..+.|+|||+++..
T Consensus 267 ~-----~~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 267 A-----PHNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp S-----CCCHHHHHTTEEEEEEEEEC
T ss_pred C-----HHHHHHHHHHhccCCEEEEe
Confidence 0 11256888999999998765
No 345
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=87.55 E-value=0.52 Score=42.15 Aligned_cols=85 Identities=18% Similarity=0.130 Sum_probs=52.6
Q ss_pred CCCCCCEEEEECC--CCCHHHHHHH-hcCCCcEEEEeCCCCCCc-------eeeecCC-CCCC-------CCCCeeEEEe
Q 025071 112 FLFNESKALSIGA--RVGQEVAALK-LVGVSDSIGIDLVPRPPL-------VIKGDFH-AQPF-------DNGTFDFEFS 173 (258)
Q Consensus 112 ~l~~~~~VLDIGc--GtG~~~~~L~-~~g~~~v~GvD~s~~~~~-------~~~aDa~-~LPf-------~d~SFD~V~s 173 (258)
.+.++.+||-+|+ |.|..+..++ ..|. +|+++|.++.... -...|.. .-.+ .++.+|+|+.
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~ 244 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVIN 244 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEE
Confidence 4678899999998 3555555444 4675 8999997643210 0111221 0011 0126999988
Q ss_pred ccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 174 NVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 174 ~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
++- ....+++..+.|++||+++..
T Consensus 245 ~~g-----~~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 245 VSV-----SEAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp CSS-----CHHHHHHHTTSEEEEEEEEEC
T ss_pred CCC-----cHHHHHHHHHHHhcCCEEEEE
Confidence 521 134678999999999998775
No 346
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=87.31 E-value=0.94 Score=41.06 Aligned_cols=123 Identities=10% Similarity=0.107 Sum_probs=74.0
Q ss_pred CCEEEEECCCCCHHHHHHHhcCC--CcE-EEEeCCCC---------CCceeeecCCCCCCC---CCCeeEEEec----cc
Q 025071 116 ESKALSIGARVGQEVAALKLVGV--SDS-IGIDLVPR---------PPLVIKGDFHAQPFD---NGTFDFEFSN----VF 176 (258)
Q Consensus 116 ~~~VLDIGcGtG~~~~~L~~~g~--~~v-~GvD~s~~---------~~~~~~aDa~~LPf~---d~SFD~V~s~----~l 176 (258)
.-+++|+-||.|.....+.+.|+ ..+ .++|+.+. +..+..+|+.++... +..+|+++.+ .+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEEVQVKNLDSISIKQIESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCCCBCCCTTTCCHHHHHHTCCCEEEECCCCTTC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCCcccCChhhcCHHHhccCCCCEEEecCCccCc
Confidence 45899999999999999998885 456 69998642 223567788777532 2368999864 34
Q ss_pred --c------ccCChH-HHHHHHHh-cccC---CcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceE-Eeeeec--C
Q 025071 177 --D------HALYPW-KFVGEIER-TLKP---AGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELV-AVRKVD--G 240 (258)
Q Consensus 177 --~------h~~~p~-~~l~Ei~R-VLKP---GG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~-~v~~v~--g 240 (258)
. ...++. ..+.|+.| +++- --.+++..... ..... ...+.+.+.|++.|.. ....++ .
T Consensus 90 s~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~----gl~~~--~~~~~i~~~l~~~GY~v~~~vl~a~~ 163 (327)
T 3qv2_A 90 NNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVP----LFKES--LVFKEIYNILIKNQYYIKDIICSPID 163 (327)
T ss_dssp SHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECG----GGGGS--HHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred ccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchh----hhcCh--HHHHHHHHHHHhCCCEEEEEEEeHHH
Confidence 1 123444 45677777 6542 12333332221 11001 1246788888888853 434444 5
Q ss_pred CCCe
Q 025071 241 FGLD 244 (258)
Q Consensus 241 ~~l~ 244 (258)
+|++
T Consensus 164 yGvP 167 (327)
T 3qv2_A 164 IGIP 167 (327)
T ss_dssp GTCS
T ss_pred cCCC
Confidence 6666
No 347
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=87.27 E-value=0.31 Score=44.07 Aligned_cols=41 Identities=17% Similarity=0.332 Sum_probs=28.3
Q ss_pred CCCCeeEEEec---ccc------c---cCChHHHHHHHHhcccCCcEEEEEec
Q 025071 164 DNGTFDFEFSN---VFD------H---ALYPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 164 ~d~SFD~V~s~---~l~------h---~~~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
++++||+|+.. ... + ...-...+.|+.|+|||||.+++...
T Consensus 55 ~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 55 PDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp CTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 46788888874 111 1 11224567899999999999999764
No 348
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=86.48 E-value=0.91 Score=40.45 Aligned_cols=85 Identities=11% Similarity=0.068 Sum_probs=52.3
Q ss_pred CCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCCc-------eeeecCCCCCCCC------CCeeEEEeccc
Q 025071 112 FLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPPL-------VIKGDFHAQPFDN------GTFDFEFSNVF 176 (258)
Q Consensus 112 ~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf~d------~SFD~V~s~~l 176 (258)
.+.++.+||-+|+|. |..+..+++ .|. +|+++|.++.... -...|..+-.+.+ +.+|+|+.++=
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g 239 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAV 239 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCC
Confidence 467889999999963 555555544 675 8999997542110 0111221111100 36899987521
Q ss_pred cccCChHHHHHHHHhcccCCcEEEEE
Q 025071 177 DHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 177 ~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
....+++..+.|+|||+++..
T Consensus 240 -----~~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 240 -----SKPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp -----CHHHHHHHHHHEEEEEEEEEC
T ss_pred -----CHHHHHHHHHHhhcCCEEEEe
Confidence 124568899999999998775
No 349
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=86.44 E-value=3.3 Score=37.83 Aligned_cols=87 Identities=13% Similarity=0.024 Sum_probs=50.8
Q ss_pred CCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCCce-------eeecCCCCCC--------CCCCeeEEEec
Q 025071 112 FLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPPLV-------IKGDFHAQPF--------DNGTFDFEFSN 174 (258)
Q Consensus 112 ~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~~~-------~~aDa~~LPf--------~d~SFD~V~s~ 174 (258)
.+.++.+||=+|+|. |..+..+++ .|...|+++|.++....+ ..-|...-.+ ....+|+|+.+
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~ 289 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEA 289 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEEC
Confidence 467889999999863 445555554 576689999976421100 0111111111 12369999874
Q ss_pred cccccCChHHHHHHHHhcc----cCCcEEEEE
Q 025071 175 VFDHALYPWKFVGEIERTL----KPAGVCVLH 202 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVL----KPGG~lii~ 202 (258)
+ -.+...+..+.+.| +|||++++.
T Consensus 290 ~----g~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 290 T----GVPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp S----SCHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred C----CCcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 2 12333445555555 999998875
No 350
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=86.33 E-value=1.1 Score=40.20 Aligned_cols=90 Identities=12% Similarity=0.064 Sum_probs=53.9
Q ss_pred HHHHhcCCCCCCEEEEECC--CCCHHHHHHH-hcCCCcEEEEeCCCCCCc-------eeeecCCCCCC--------CCCC
Q 025071 106 DLKQRHFLFNESKALSIGA--RVGQEVAALK-LVGVSDSIGIDLVPRPPL-------VIKGDFHAQPF--------DNGT 167 (258)
Q Consensus 106 ~L~~~~~l~~~~~VLDIGc--GtG~~~~~L~-~~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf--------~d~S 167 (258)
.+.+...+.++.+||-.|+ |.|..+..++ ..|. +|+++|.++.... -...|..+-.+ ....
T Consensus 161 al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~ 239 (351)
T 1yb5_A 161 ALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKG 239 (351)
T ss_dssp HHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTC
T ss_pred HHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCC
Confidence 3333345678899999997 3455444444 4675 7999997532100 01112221111 1236
Q ss_pred eeEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 168 FDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 168 FD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+|+|+.++= ...+.+..+.|+|||+++..
T Consensus 240 ~D~vi~~~G------~~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 240 IDIIIEMLA------NVNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp EEEEEESCH------HHHHHHHHHHEEEEEEEEEC
T ss_pred cEEEEECCC------hHHHHHHHHhccCCCEEEEE
Confidence 999998521 23467889999999998775
No 351
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=86.18 E-value=0.32 Score=42.63 Aligned_cols=88 Identities=19% Similarity=0.187 Sum_probs=53.1
Q ss_pred HHHHhcCCCCCCEEEEECC--CCCHHHHHHHh-cCCCcEEEEeCCCCCCce-------eeecCCC-CCCCC--CCeeEEE
Q 025071 106 DLKQRHFLFNESKALSIGA--RVGQEVAALKL-VGVSDSIGIDLVPRPPLV-------IKGDFHA-QPFDN--GTFDFEF 172 (258)
Q Consensus 106 ~L~~~~~l~~~~~VLDIGc--GtG~~~~~L~~-~g~~~v~GvD~s~~~~~~-------~~aDa~~-LPf~d--~SFD~V~ 172 (258)
.+.... +.++.+||-+|+ |.|..+..+++ .|. +|+++|.++..... ...|..+ -.+.+ +.+|+|+
T Consensus 117 ~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vi 194 (302)
T 1iz0_A 117 ALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVL 194 (302)
T ss_dssp HHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEE
T ss_pred HHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEE
Confidence 333344 778999999998 34555555554 675 89999976432210 0111110 00000 4689988
Q ss_pred eccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 173 SNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 173 s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
. +=. ..+++..+.|+|||+++..
T Consensus 195 d-~g~------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 195 E-VRG------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp E-CSC------TTHHHHHTTEEEEEEEEEC
T ss_pred E-CCH------HHHHHHHHhhccCCEEEEE
Confidence 7 321 2467899999999988764
No 352
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=85.68 E-value=0.42 Score=42.79 Aligned_cols=90 Identities=16% Similarity=0.178 Sum_probs=54.8
Q ss_pred HHHHHhcCCCCCCEEEEECC--CCCHHHHHHHh-cCCCcEEEEeCCCCCC---------ceeeecCCCCC------CCCC
Q 025071 105 QDLKQRHFLFNESKALSIGA--RVGQEVAALKL-VGVSDSIGIDLVPRPP---------LVIKGDFHAQP------FDNG 166 (258)
Q Consensus 105 ~~L~~~~~l~~~~~VLDIGc--GtG~~~~~L~~-~g~~~v~GvD~s~~~~---------~~~~aDa~~LP------f~d~ 166 (258)
..+.+...+.++.+||-.|+ |.|..+..+++ .|. +|++++.++... .++..+ .++. ....
T Consensus 149 ~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~ 226 (342)
T 4eye_A 149 FAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGA 226 (342)
T ss_dssp HHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTS
T ss_pred HHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCC
Confidence 33334455778999999998 34555555554 575 899999764321 111111 1100 0123
Q ss_pred CeeEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 167 TFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 167 SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
.+|+|+.++=. ..+.+..+.|+|||++++.
T Consensus 227 g~Dvvid~~g~------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 227 GVDMVVDPIGG------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp CEEEEEESCC--------CHHHHHHTEEEEEEEEEC
T ss_pred CceEEEECCch------hHHHHHHHhhcCCCEEEEE
Confidence 69999975211 1457889999999998875
No 353
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=85.64 E-value=0.31 Score=43.60 Aligned_cols=83 Identities=12% Similarity=0.039 Sum_probs=51.7
Q ss_pred CCCCCCEEEEECCCC-CHHHHHHHh-c--CCCcEEEEeCCCCCC---------ceeeecC-----CCCCCCCCCeeEEEe
Q 025071 112 FLFNESKALSIGARV-GQEVAALKL-V--GVSDSIGIDLVPRPP---------LVIKGDF-----HAQPFDNGTFDFEFS 173 (258)
Q Consensus 112 ~l~~~~~VLDIGcGt-G~~~~~L~~-~--g~~~v~GvD~s~~~~---------~~~~aDa-----~~LPf~d~SFD~V~s 173 (258)
.+ ++.+||-+|+|. |..+..+++ . |. +|+++|.++... .++..+. .++. ....+|+|+.
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~g~g~D~vid 244 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELGADYVSEMKDAESLINKLT-DGLGASIAID 244 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHH-TTCCEEEEEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhh-cCCCccEEEE
Confidence 46 889999999964 555555554 5 75 799999764211 1111000 0110 1237999997
Q ss_pred ccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 174 NVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 174 ~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
.+= -...+++..+.|+|||+++..
T Consensus 245 ~~g-----~~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 245 LVG-----TEETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp SSC-----CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCC-----ChHHHHHHHHHhhcCCEEEEe
Confidence 521 123568899999999998775
No 354
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=84.55 E-value=8.6 Score=33.69 Aligned_cols=36 Identities=8% Similarity=0.111 Sum_probs=24.9
Q ss_pred CCCeeEEEeccccccCChHHHHHHHHhcccCCcEEEE
Q 025071 165 NGTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVL 201 (258)
Q Consensus 165 d~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii 201 (258)
.++||+|+..+ ++...-..+++.+...|+|||++++
T Consensus 180 ~~~~dlv~ID~-D~Y~~t~~~le~~~p~l~~GGvIv~ 215 (257)
T 3tos_A 180 QTVIALAYFDL-DLYEPTKAVLEAIRPYLTKGSIVAF 215 (257)
T ss_dssp TCCEEEEEECC-CCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCceEEEEEcC-cccchHHHHHHHHHHHhCCCcEEEE
Confidence 45688888742 2212223467889999999999998
No 355
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=83.95 E-value=0.72 Score=41.14 Aligned_cols=84 Identities=8% Similarity=0.004 Sum_probs=52.8
Q ss_pred CCCCCCEEEEECC--CCCHHHHHHHh-cCCCcEEEEeCCCCCCc-------eeeecCCCCCC--------CCCCeeEEEe
Q 025071 112 FLFNESKALSIGA--RVGQEVAALKL-VGVSDSIGIDLVPRPPL-------VIKGDFHAQPF--------DNGTFDFEFS 173 (258)
Q Consensus 112 ~l~~~~~VLDIGc--GtG~~~~~L~~-~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf--------~d~SFD~V~s 173 (258)
.+.++.+||-+|+ |.|..+..+++ .|. +|+++|.++.... -...|..+-.+ ....+|+|+.
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~ 241 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVD 241 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEE
Confidence 5678899999998 56666655554 675 8999997532110 01112221111 1247999998
Q ss_pred ccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 174 NVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 174 ~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
++=. ..+++..+.|+|||+++..
T Consensus 242 ~~g~------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 242 HTGA------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp SSCS------SSHHHHHHHEEEEEEEEES
T ss_pred CCCH------HHHHHHHHhhccCCEEEEE
Confidence 5311 2357888999999988775
No 356
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=83.90 E-value=0.9 Score=40.84 Aligned_cols=88 Identities=14% Similarity=-0.024 Sum_probs=51.8
Q ss_pred cCCCCCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCCce-------eeecCCCC-CCC---CCCeeEEEecccc
Q 025071 111 HFLFNESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPPLV-------IKGDFHAQ-PFD---NGTFDFEFSNVFD 177 (258)
Q Consensus 111 ~~l~~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~~~-------~~aDa~~L-Pf~---d~SFD~V~s~~l~ 177 (258)
..+.++.+||-+|+|. |..+..+++ .|. +|+++|.++..... ...|..+- .+. .+.+|+|+..+=.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~ 253 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASS 253 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCC
Confidence 3567889999999853 555555554 576 69999976543210 01111111 100 0479999975211
Q ss_pred ccCChHHHHHHHHhcccCCcEEEEE
Q 025071 178 HALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 178 h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
. +...+++..+.|+|||+++..
T Consensus 254 -~--~~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 254 -L--TDIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp -S--TTCCTTTGGGGEEEEEEEEEC
T ss_pred -C--cHHHHHHHHHHhcCCCEEEEe
Confidence 0 011245788999999998765
No 357
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=83.76 E-value=1.3 Score=39.40 Aligned_cols=86 Identities=19% Similarity=0.113 Sum_probs=52.6
Q ss_pred cCCCCCCEEEEECCC--CCHHHHHHH-hc-CCCcEEEEeCCCCCCc-------eeeecCCCCCC-------CC-CCeeEE
Q 025071 111 HFLFNESKALSIGAR--VGQEVAALK-LV-GVSDSIGIDLVPRPPL-------VIKGDFHAQPF-------DN-GTFDFE 171 (258)
Q Consensus 111 ~~l~~~~~VLDIGcG--tG~~~~~L~-~~-g~~~v~GvD~s~~~~~-------~~~aDa~~LPf-------~d-~SFD~V 171 (258)
..+.++.+||-.|+| .|..+..++ .. |. +|+++|.++.... -...|..+..+ .+ +.+|+|
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 244 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAV 244 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEE
Confidence 456788999999998 444444443 45 75 7999997542110 01112111111 11 479999
Q ss_pred EeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 172 FSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 172 ~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+.++= ....+++..+.|+|||+++..
T Consensus 245 i~~~g-----~~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 245 IDLNN-----SEKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp EESCC-----CHHHHTTGGGGEEEEEEEEEC
T ss_pred EECCC-----CHHHHHHHHHHHhcCCEEEEE
Confidence 98521 133567889999999998775
No 358
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=83.70 E-value=1.9 Score=38.05 Aligned_cols=86 Identities=17% Similarity=0.070 Sum_probs=52.2
Q ss_pred hcCCCCCCEEEEECC--CCCHHHHHHHh-cCCCcEEEEeCCCCCCc-------eeeecCCCCCC--------CCCCeeEE
Q 025071 110 RHFLFNESKALSIGA--RVGQEVAALKL-VGVSDSIGIDLVPRPPL-------VIKGDFHAQPF--------DNGTFDFE 171 (258)
Q Consensus 110 ~~~l~~~~~VLDIGc--GtG~~~~~L~~-~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf--------~d~SFD~V 171 (258)
...+.++.+||-+|+ |.|..+..+++ .|. +|+++|.++.... -...|...-.+ ....+|+|
T Consensus 143 ~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~v 221 (334)
T 3qwb_A 143 AYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDAS 221 (334)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred hccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEE
Confidence 345678999999995 34555555544 575 8999997532110 01111111111 13469999
Q ss_pred EeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 172 FSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 172 ~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+.++= ...+++..+.|+|||+++..
T Consensus 222 id~~g------~~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 222 FDSVG------KDTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp EECCG------GGGHHHHHHHEEEEEEEEEC
T ss_pred EECCC------hHHHHHHHHHhccCCEEEEE
Confidence 98521 13467888999999998875
No 359
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=83.40 E-value=0.85 Score=39.42 Aligned_cols=21 Identities=10% Similarity=0.350 Sum_probs=17.8
Q ss_pred HHHHHHHHhcccCCcEEEEEe
Q 025071 183 WKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 183 ~~~l~Ei~RVLKPGG~lii~v 203 (258)
...++|+.|+|||||.+++..
T Consensus 54 ~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 54 YRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCeEEEEEc
Confidence 456789999999999998864
No 360
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=82.81 E-value=2.6 Score=37.80 Aligned_cols=78 Identities=18% Similarity=0.102 Sum_probs=48.8
Q ss_pred CCEEEEECCCC-CHHHHHHH-hcCCCcEEEEeCCC---CCCc-------eeeecCCCCCCCC------CCeeEEEecccc
Q 025071 116 ESKALSIGARV-GQEVAALK-LVGVSDSIGIDLVP---RPPL-------VIKGDFHAQPFDN------GTFDFEFSNVFD 177 (258)
Q Consensus 116 ~~~VLDIGcGt-G~~~~~L~-~~g~~~v~GvD~s~---~~~~-------~~~aDa~~LPf~d------~SFD~V~s~~l~ 177 (258)
+.+||-+|+|. |..+..++ ..|. +|+++|.++ .... -.. | .+ .+.+ +.+|+|+.++=
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga~~v-~-~~-~~~~~~~~~~~~~d~vid~~g- 255 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKTNYY-N-SS-NGYDKLKDSVGKFDVIIDATG- 255 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTCEEE-E-CT-TCSHHHHHHHCCEEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCCcee-c-hH-HHHHHHHHhCCCCCEEEECCC-
Confidence 89999999842 33333443 4676 899999875 3211 111 3 33 3221 46999998521
Q ss_pred ccCChHHHH-HHHHhcccCCcEEEEE
Q 025071 178 HALYPWKFV-GEIERTLKPAGVCVLH 202 (258)
Q Consensus 178 h~~~p~~~l-~Ei~RVLKPGG~lii~ 202 (258)
.+ ..+ ++..+.|+|||+++..
T Consensus 256 ---~~-~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 256 ---AD-VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp ---CC-THHHHHHGGGEEEEEEEEEC
T ss_pred ---Ch-HHHHHHHHHHHhcCCEEEEE
Confidence 11 245 7899999999998775
No 361
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=82.72 E-value=1.2 Score=39.69 Aligned_cols=81 Identities=16% Similarity=0.148 Sum_probs=48.8
Q ss_pred CCCEEEEEC-CC-CCHHHHHHHh-cCCCcEEEEeCCCCCCc-------eeeecCCCCCC-------CCCCeeEEEecccc
Q 025071 115 NESKALSIG-AR-VGQEVAALKL-VGVSDSIGIDLVPRPPL-------VIKGDFHAQPF-------DNGTFDFEFSNVFD 177 (258)
Q Consensus 115 ~~~~VLDIG-cG-tG~~~~~L~~-~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf-------~d~SFD~V~s~~l~ 177 (258)
++.+||-+| +| .|..+..+++ .|. +|+++|.++.... -...|..+ .+ ..+.+|+|+.++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~~~g~Dvv~d~~-- 225 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGADIVLNHKE-SLLNQFKTQGIELVDYVFCTF-- 225 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCSEEECTTS-CHHHHHHHHTCCCEEEEEESS--
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEECCc-cHHHHHHHhCCCCccEEEECC--
Confidence 788999994 44 3555555554 576 8999997532110 00111111 11 234699999742
Q ss_pred ccCChHHHHHHHHhcccCCcEEEEE
Q 025071 178 HALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 178 h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
.....+.+..+.|+|||+++..
T Consensus 226 ---g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 226 ---NTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEES
T ss_pred ---CchHHHHHHHHHhccCCEEEEE
Confidence 1234568889999999998764
No 362
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=82.28 E-value=1.3 Score=39.94 Aligned_cols=124 Identities=15% Similarity=0.102 Sum_probs=70.8
Q ss_pred CCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCC--------CceeeecCCCCCCCC-CCeeEEEec----cccc----
Q 025071 116 ESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRP--------PLVIKGDFHAQPFDN-GTFDFEFSN----VFDH---- 178 (258)
Q Consensus 116 ~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~--------~~~~~aDa~~LPf~d-~SFD~V~s~----~l~h---- 178 (258)
+.+++|+.||.|.....+.+.|+..|.++|+.+.. +....+|+.++.-.+ ..+|+|+.+ .+..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~~~Di~~~~~~~~~~~D~l~~gpPCQ~fS~ag~~ 90 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAGFPCQAFSISGKQ 90 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCCBSCGGGSCGGGSCCCSEEEEECCCTTTCTTSCC
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCCcCCHHHcCHhhCCCCCEEEECCCCCCcchhccc
Confidence 46899999999999999999998778899986421 111256666553211 258999974 2221
Q ss_pred --cCChH-HHH---HHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceE-Eeeeec--CCCCe
Q 025071 179 --ALYPW-KFV---GEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELV-AVRKVD--GFGLD 244 (258)
Q Consensus 179 --~~~p~-~~l---~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~-~v~~v~--g~~l~ 244 (258)
..++. ..+ -++.+.+||--.++=-|+.-. +.+.-...+.+.+.|++.|.. ....++ .+|.+
T Consensus 91 ~g~~d~r~~L~~~~~r~i~~~~P~~~~~ENV~gl~-----~~~~~~~~~~i~~~l~~~GY~v~~~vl~a~~~GvP 160 (327)
T 2c7p_A 91 KGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFA-----SHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIP 160 (327)
T ss_dssp CGGGSTTSCHHHHHHHHHHHHCCSEEEEEEEGGGG-----TGGGGHHHHHHHHHHHHTTBCCEEEEEEGGGGTCS
T ss_pred CCCcchhhHHHHHHHHHHHhccCcEEEEeCcHHHH-----hccccHHHHHHHHHHHhCCCEEEEEEEEHHHcCCC
Confidence 12332 123 344455678533333343210 111111246778888888743 333333 56776
No 363
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=81.94 E-value=1.1 Score=40.05 Aligned_cols=90 Identities=13% Similarity=0.167 Sum_probs=53.9
Q ss_pred HHHhcCCCCC--CEEEEECCC--CCHHHHHHH-hcCCCcEEEEeCCCCCC--------ceeeecCCCCCC-------CCC
Q 025071 107 LKQRHFLFNE--SKALSIGAR--VGQEVAALK-LVGVSDSIGIDLVPRPP--------LVIKGDFHAQPF-------DNG 166 (258)
Q Consensus 107 L~~~~~l~~~--~~VLDIGcG--tG~~~~~L~-~~g~~~v~GvD~s~~~~--------~~~~aDa~~LPf-------~d~ 166 (258)
+.+...+.++ .+||-.|++ .|..+..++ ..|..+|+++|.++... .-...|..+-.+ ..+
T Consensus 150 l~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~ 229 (357)
T 2zb4_A 150 IQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPA 229 (357)
T ss_dssp HHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTT
T ss_pred HHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCC
Confidence 3344557788 999999983 444444443 46754799999753110 001112211111 112
Q ss_pred CeeEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 167 TFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 167 SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
.+|+|+.++= ...+++..+.|++||++++.
T Consensus 230 ~~d~vi~~~G------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 230 GVDVYFDNVG------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp CEEEEEESCC------HHHHHHHHHTEEEEEEEEEC
T ss_pred CCCEEEECCC------HHHHHHHHHHhccCcEEEEE
Confidence 6999998531 24578899999999998775
No 364
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=81.25 E-value=1.4 Score=39.75 Aligned_cols=87 Identities=16% Similarity=0.077 Sum_probs=53.5
Q ss_pred HhcCCCCCCEEEEECC--CCCHHHHHHHh-cCCCcEEEEeCCCCCCc-------eeeecCCCCCC-------CCCCeeEE
Q 025071 109 QRHFLFNESKALSIGA--RVGQEVAALKL-VGVSDSIGIDLVPRPPL-------VIKGDFHAQPF-------DNGTFDFE 171 (258)
Q Consensus 109 ~~~~l~~~~~VLDIGc--GtG~~~~~L~~-~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf-------~d~SFD~V 171 (258)
....+.++.+||-.|+ |.|..+..+++ .|. +|+++|.++.... -...|...-.+ ..+.+|+|
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~v 235 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVV 235 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEE
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEE
Confidence 3345778999999993 45666665554 576 7999997532100 00111111111 12469999
Q ss_pred EeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 172 FSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 172 ~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+.++= ...++++.+.|+|||+++..
T Consensus 236 id~~g------~~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 236 YESVG------GAMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp EECSC------THHHHHHHHHEEEEEEEEEC
T ss_pred EECCC------HHHHHHHHHHHhcCCEEEEE
Confidence 98521 14568899999999998775
No 365
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=80.75 E-value=2.1 Score=37.78 Aligned_cols=89 Identities=18% Similarity=0.127 Sum_probs=53.8
Q ss_pred HHHhcCCCCCCEEEEECC-C-CCHHHHHHHh-cCCCcEEEEeCCCCCCc-------eeeecCCCCCC--------CCCCe
Q 025071 107 LKQRHFLFNESKALSIGA-R-VGQEVAALKL-VGVSDSIGIDLVPRPPL-------VIKGDFHAQPF--------DNGTF 168 (258)
Q Consensus 107 L~~~~~l~~~~~VLDIGc-G-tG~~~~~L~~-~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf--------~d~SF 168 (258)
+.....+.++.+||-.|+ | .|..+..+++ .|. +|+++|.++.... -...|...-.+ ....+
T Consensus 132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCE
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCc
Confidence 333345778999999993 3 4555555544 576 8999997542110 01112111111 23479
Q ss_pred eEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 169 DFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 169 D~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
|+|+.++=. ..+.+..+.|+|||++++.
T Consensus 211 Dvvid~~g~------~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 211 PVVYDGVGQ------DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp EEEEESSCG------GGHHHHHTTEEEEEEEEEC
T ss_pred eEEEECCCh------HHHHHHHHHhcCCCEEEEE
Confidence 999985211 2457889999999998886
No 366
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=80.22 E-value=2.3 Score=38.06 Aligned_cols=45 Identities=7% Similarity=-0.023 Sum_probs=35.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCC
Q 025071 102 RFFQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVP 148 (258)
Q Consensus 102 ~~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~ 148 (258)
.+++.++... ..++..|||--||+|..+.+..+.| .+.+|+|+.+
T Consensus 240 ~l~~~~i~~~-~~~~~~VlDpF~GsGtt~~aa~~~g-r~~ig~e~~~ 284 (323)
T 1boo_A 240 KLPEFFIRML-TEPDDLVVDIFGGSNTTGLVAERES-RKWISFEMKP 284 (323)
T ss_dssp HHHHHHHHHH-CCTTCEEEETTCTTCHHHHHHHHTT-CEEEEEESCH
T ss_pred HHHHHHHHHh-CCCCCEEEECCCCCCHHHHHHHHcC-CCEEEEeCCH
Confidence 4566666543 3578899999999999998877777 4899999864
No 367
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=80.10 E-value=6.2 Score=34.76 Aligned_cols=87 Identities=13% Similarity=-0.095 Sum_probs=51.2
Q ss_pred cCCCCCCEEEEECCCCCH-HHH-HHHhcCCCcEEEEeCCCCCCc-------eeeecCCCCCC--------CCCCeeEEEe
Q 025071 111 HFLFNESKALSIGARVGQ-EVA-ALKLVGVSDSIGIDLVPRPPL-------VIKGDFHAQPF--------DNGTFDFEFS 173 (258)
Q Consensus 111 ~~l~~~~~VLDIGcGtG~-~~~-~L~~~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf--------~d~SFD~V~s 173 (258)
..+.++.+||=+|+|++. .+. .++..+..+|+++|.++.... -..-|..+-.+ ...-+|.++.
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~ 238 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIV 238 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEE
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEE
Confidence 346789999999998653 333 334455568999997643110 00111111111 2234676665
Q ss_pred ccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 174 NVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 174 ~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
.+. ....+....+.|+|||.+++.
T Consensus 239 ~~~-----~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 239 CAV-----ARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp CCS-----CHHHHHHHHHTEEEEEEEEEC
T ss_pred ecc-----CcchhheeheeecCCceEEEE
Confidence 321 234567889999999998775
No 368
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=79.95 E-value=1.4 Score=35.31 Aligned_cols=40 Identities=18% Similarity=0.351 Sum_probs=31.4
Q ss_pred CCCCCCeeEEEe-c-cc-cccCChHHHHHHHHhcccCCcEEEE
Q 025071 162 PFDNGTFDFEFS-N-VF-DHALYPWKFVGEIERTLKPAGVCVL 201 (258)
Q Consensus 162 Pf~d~SFD~V~s-~-~l-~h~~~p~~~l~Ei~RVLKPGG~lii 201 (258)
-+++++||.|+. + .= .+..-|...+.-+.+.|||||.+.-
T Consensus 54 sLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 445899999986 3 11 4455678999999999999999876
No 369
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=77.82 E-value=2.3 Score=37.22 Aligned_cols=78 Identities=15% Similarity=0.250 Sum_probs=49.1
Q ss_pred EEEEECC--CCCHHHHHHHh-cCCCcEEEEeCCCCCC---------ceeee-cCC-CCCCCCCCeeEEEeccccccCChH
Q 025071 118 KALSIGA--RVGQEVAALKL-VGVSDSIGIDLVPRPP---------LVIKG-DFH-AQPFDNGTFDFEFSNVFDHALYPW 183 (258)
Q Consensus 118 ~VLDIGc--GtG~~~~~L~~-~g~~~v~GvD~s~~~~---------~~~~a-Da~-~LPf~d~SFD~V~s~~l~h~~~p~ 183 (258)
+||=.|+ |.|..+..+++ .|. +|+++|.++... .++.. +.. ......+.+|+|+.++ ..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~------g~ 221 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTV------GD 221 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESS------CH
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECC------Cc
Confidence 4999997 35666666665 576 899999764321 11111 100 1112345799988742 12
Q ss_pred HHHHHHHhcccCCcEEEEE
Q 025071 184 KFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 184 ~~l~Ei~RVLKPGG~lii~ 202 (258)
..+.+..+.|+|||+++..
T Consensus 222 ~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 222 KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp HHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHHHHhcCCEEEEE
Confidence 3678999999999998875
No 370
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=77.41 E-value=2.1 Score=39.67 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=28.3
Q ss_pred CCCCEEEEECCCCCHHHHHHH-hc-C-CCcEEEEeCCC
Q 025071 114 FNESKALSIGARVGQEVAALK-LV-G-VSDSIGIDLVP 148 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~~~~~L~-~~-g-~~~v~GvD~s~ 148 (258)
.++..++||||+.|..+..++ +. + ..+|++++.++
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p 262 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDR 262 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCH
Confidence 678899999999999998876 43 3 35899999754
No 371
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=77.14 E-value=3.8 Score=36.76 Aligned_cols=46 Identities=22% Similarity=0.181 Sum_probs=36.1
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCC
Q 025071 101 SRFFQDLKQRHFLFNESKALSIGARVGQEVAALKLVGVSDSIGIDLVP 148 (258)
Q Consensus 101 ~~~~~~L~~~~~l~~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~ 148 (258)
..+++.++... -.++..|||-=||+|..+.+..+.| .+.+|+|+.+
T Consensus 229 ~~l~~~~i~~~-~~~~~~vlDpF~GsGtt~~aa~~~~-r~~ig~e~~~ 274 (319)
T 1eg2_A 229 AAVIERLVRAL-SHPGSTVLDFFAGSGVTARVAIQEG-RNSICTDAAP 274 (319)
T ss_dssp HHHHHHHHHHH-SCTTCEEEETTCTTCHHHHHHHHHT-CEEEEEESST
T ss_pred HHHHHHHHHHh-CCCCCEEEecCCCCCHHHHHHHHcC-CcEEEEECCc
Confidence 35666666543 3578899999999999988877777 4799999975
No 372
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=76.86 E-value=4.2 Score=35.83 Aligned_cols=86 Identities=16% Similarity=0.211 Sum_probs=52.6
Q ss_pred hcCCCCCCEEEEECC--CCCHHHHHHH-hcCCCcEEEEeCCCCCCc-------eeeecCCCCCC--------CCCCeeEE
Q 025071 110 RHFLFNESKALSIGA--RVGQEVAALK-LVGVSDSIGIDLVPRPPL-------VIKGDFHAQPF--------DNGTFDFE 171 (258)
Q Consensus 110 ~~~l~~~~~VLDIGc--GtG~~~~~L~-~~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf--------~d~SFD~V 171 (258)
...+.++.+||-.|+ |.|..+..++ ..|. +|+++|.++.... -...|..+-.+ ....+|+|
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~v 218 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVV 218 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEE
Confidence 345678899999996 4566555444 4675 8999997642100 01112211111 12369999
Q ss_pred EeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 172 FSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 172 ~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+.++=. ..+++..+.|+|||+++..
T Consensus 219 i~~~g~------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 219 YDSIGK------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp EECSCT------TTHHHHHHTEEEEEEEEEC
T ss_pred EECCcH------HHHHHHHHhhccCCEEEEE
Confidence 985211 3467889999999998775
No 373
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=76.59 E-value=0.66 Score=40.96 Aligned_cols=86 Identities=13% Similarity=0.049 Sum_probs=51.8
Q ss_pred hcCCCCCCEEEEECC--CCCHHHHHHH-hcCCCcEEEEeCCCCCCc-------eeeecCCCCCC--------CCCCeeEE
Q 025071 110 RHFLFNESKALSIGA--RVGQEVAALK-LVGVSDSIGIDLVPRPPL-------VIKGDFHAQPF--------DNGTFDFE 171 (258)
Q Consensus 110 ~~~l~~~~~VLDIGc--GtG~~~~~L~-~~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf--------~d~SFD~V 171 (258)
...+.++.+||-.|+ |.|..+..++ ..|. +|+++|.++.... -...|..+-.+ ....+|+|
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~v 213 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVV 213 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEE
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEE
Confidence 345678899999994 3454444443 4675 8999997532100 01112111111 12369999
Q ss_pred EeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 172 FSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 172 ~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+.++= ...+++..+.|++||+++..
T Consensus 214 i~~~g------~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 214 YDSVG------RDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp EECSC------GGGHHHHHHTEEEEEEEEEC
T ss_pred EECCc------hHHHHHHHHHhcCCCEEEEE
Confidence 98531 23467899999999998775
No 374
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=76.47 E-value=2 Score=37.86 Aligned_cols=84 Identities=18% Similarity=0.120 Sum_probs=51.3
Q ss_pred CCCCCC-EEEEECC--CCCHHHHHHHh-cCCCcEEEEeCCCCCC---------ceeee-c--CCC-CCCCCCCeeEEEec
Q 025071 112 FLFNES-KALSIGA--RVGQEVAALKL-VGVSDSIGIDLVPRPP---------LVIKG-D--FHA-QPFDNGTFDFEFSN 174 (258)
Q Consensus 112 ~l~~~~-~VLDIGc--GtG~~~~~L~~-~g~~~v~GvD~s~~~~---------~~~~a-D--a~~-LPf~d~SFD~V~s~ 174 (258)
.+.++. +||-.|+ |.|..+..+++ .|. +|++++.++... .++.. + .+. .....+.+|+|+.+
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~ 224 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDP 224 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEES
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEEC
Confidence 456664 8999998 34555555544 575 799999764321 11111 1 111 11223569999875
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+= . ..+.+..+.|+|||++++.
T Consensus 225 ~g----~--~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 225 VG----G--KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp CC----T--HHHHHHHTTEEEEEEEEEC
T ss_pred Cc----H--HHHHHHHHhhcCCCEEEEE
Confidence 21 1 2568899999999998775
No 375
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=76.16 E-value=3.9 Score=35.88 Aligned_cols=84 Identities=17% Similarity=0.155 Sum_probs=50.2
Q ss_pred CCCCCC-EEEEECC--CCCHHHHHHHh-cCCCcEEEEeCCCCCC---------ceeee-cC--CC-CCCCCCCeeEEEec
Q 025071 112 FLFNES-KALSIGA--RVGQEVAALKL-VGVSDSIGIDLVPRPP---------LVIKG-DF--HA-QPFDNGTFDFEFSN 174 (258)
Q Consensus 112 ~l~~~~-~VLDIGc--GtG~~~~~L~~-~g~~~v~GvD~s~~~~---------~~~~a-Da--~~-LPf~d~SFD~V~s~ 174 (258)
.+.++. +||-+|+ |.|..+..+++ .|. +|++++.++... .++.. +. +. .....+.+|+|+.+
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~ 223 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDP 223 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEEC
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEEC
Confidence 456664 8999998 35555555554 575 799999764321 11111 10 00 01123469999875
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+= . ..+.+..+.|+|||++++.
T Consensus 224 ~g----~--~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 224 VG----G--RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp ST----T--TTHHHHHHTEEEEEEEEEC
T ss_pred Cc----H--HHHHHHHHhhccCCEEEEE
Confidence 21 1 1357889999999998775
No 376
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=75.73 E-value=2.8 Score=37.48 Aligned_cols=86 Identities=12% Similarity=0.071 Sum_probs=51.4
Q ss_pred hcCCCCCCEEEEECC--CCCHHHHHHH-hcCCCcEEEEeCCCCCCc-------eeeecCCCCCC--------CCCCeeEE
Q 025071 110 RHFLFNESKALSIGA--RVGQEVAALK-LVGVSDSIGIDLVPRPPL-------VIKGDFHAQPF--------DNGTFDFE 171 (258)
Q Consensus 110 ~~~l~~~~~VLDIGc--GtG~~~~~L~-~~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf--------~d~SFD~V 171 (258)
...+.++.+||-.|+ |.|..+..++ ..|. +|+++|.++.... -...|...-.+ ....+|+|
T Consensus 157 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 235 (354)
T 2j8z_A 157 VGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLI 235 (354)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred hcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEE
Confidence 345678899999985 3455544444 4675 7999997532110 01112211111 12469999
Q ss_pred EeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 172 FSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 172 ~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+.++=. ..+.+..+.|+|||+++..
T Consensus 236 i~~~G~------~~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 236 LDCIGG------SYWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp EESSCG------GGHHHHHHHEEEEEEEEEC
T ss_pred EECCCc------hHHHHHHHhccCCCEEEEE
Confidence 985211 1357888999999998875
No 377
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=75.26 E-value=3.4 Score=36.95 Aligned_cols=85 Identities=14% Similarity=-0.010 Sum_probs=48.8
Q ss_pred CCC-CCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCCce-e-------eecCCC---CCCCCCCeeEEEecccc
Q 025071 112 FLF-NESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPPLV-I-------KGDFHA---QPFDNGTFDFEFSNVFD 177 (258)
Q Consensus 112 ~l~-~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~~~-~-------~aDa~~---LPf~d~SFD~V~s~~l~ 177 (258)
.+. ++.+||-+|+|. |..+..+++ .|. +|+++|.++..... . ..|..+ +--..+.+|+|+..+=.
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~ 254 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPV 254 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCS
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCC
Confidence 355 889999999762 444444544 575 79999976432110 0 001110 00001369999874210
Q ss_pred ccCChHHHHHHHHhcccCCcEEEEE
Q 025071 178 HALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 178 h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
. ..+++..+.|+|||+++..
T Consensus 255 ~-----~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 255 H-----HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp C-----CCSHHHHTTEEEEEEEEEC
T ss_pred h-----HHHHHHHHHhccCCEEEEe
Confidence 0 1236788999999998775
No 378
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=75.21 E-value=6.3 Score=36.54 Aligned_cols=85 Identities=16% Similarity=0.152 Sum_probs=51.9
Q ss_pred cCCCCCCEEEEECC-C-CCHHHHHHHh-cCCCcEEEEeCCCCCCc-------eeeecCCCCCC-----------------
Q 025071 111 HFLFNESKALSIGA-R-VGQEVAALKL-VGVSDSIGIDLVPRPPL-------VIKGDFHAQPF----------------- 163 (258)
Q Consensus 111 ~~l~~~~~VLDIGc-G-tG~~~~~L~~-~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf----------------- 163 (258)
..+.++.+||=+|+ | .|..+..+++ .|. ++++++.++.... -...|.....+
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~ 302 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRF 302 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHH
Confidence 35678899999998 3 4555555554 565 7888886432110 01111111111
Q ss_pred --------CCCCeeEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 164 --------DNGTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 164 --------~d~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
....+|+|+.++ ....+.+..++|+|||++++.
T Consensus 303 ~~~i~~~t~g~g~Dvvid~~------G~~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 303 GKRIRELTGGEDIDIVFEHP------GRETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHTSCCEEEEEECS------CHHHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHhCCCCCcEEEEcC------CchhHHHHHHHhhCCcEEEEE
Confidence 124799998742 124568889999999998875
No 379
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=74.37 E-value=1.8 Score=39.23 Aligned_cols=120 Identities=13% Similarity=0.127 Sum_probs=71.2
Q ss_pred CEEEEECCCCCHHHHHHHhcCC--CcEEEEeCCCC---------C-CceeeecCCCCCC---CCCCeeEEEec----ccc
Q 025071 117 SKALSIGARVGQEVAALKLVGV--SDSIGIDLVPR---------P-PLVIKGDFHAQPF---DNGTFDFEFSN----VFD 177 (258)
Q Consensus 117 ~~VLDIGcGtG~~~~~L~~~g~--~~v~GvD~s~~---------~-~~~~~aDa~~LPf---~d~SFD~V~s~----~l~ 177 (258)
-+++|+-||.|.....+.+.|+ ..|.++|+.+. + ..+..+|+.++.. +...+|+++.+ .+.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~fS 83 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPFT 83 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCSE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcchh
Confidence 3799999999999999988886 55789998642 1 2356677776643 23368999864 221
Q ss_pred ------ccCChH-HHHHHHHhcc---c-CCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCceE-Eeeeec--CCCC
Q 025071 178 ------HALYPW-KFVGEIERTL---K-PAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESELV-AVRKVD--GFGL 243 (258)
Q Consensus 178 ------h~~~p~-~~l~Ei~RVL---K-PGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~~-~v~~v~--g~~l 243 (258)
...++. ..+.|+.|++ + | .+++...... .-... ..+.+.+.|++.|.. ....++ .+|+
T Consensus 84 ~ag~~~~~~d~r~~L~~~~~r~i~~~~~P--~~~vlENV~g----l~~~~--~~~~i~~~l~~~GY~v~~~vl~a~~~Gv 155 (333)
T 4h0n_A 84 RNGKYLDDNDPRTNSFLYLIGILDQLDNV--DYILMENVKG----FENST--VRNLFIDKLKECNFIYQEFLLCPSTVGV 155 (333)
T ss_dssp ETTEECCTTCTTSCCHHHHHHHGGGCTTC--CEEEEEECTT----GGGSH--HHHHHHHHHHHTTEEEEEEEECTTTTTC
T ss_pred hhhhccCCcCcccccHHHHHHHHHHhcCC--CEEEEecchh----hhhhh--HHHHHHHHHHhCCCeEEEEEecHHHcCC
Confidence 122332 2345555555 4 5 3333322211 10011 246788889988864 444444 5777
Q ss_pred e
Q 025071 244 D 244 (258)
Q Consensus 244 ~ 244 (258)
+
T Consensus 156 P 156 (333)
T 4h0n_A 156 P 156 (333)
T ss_dssp S
T ss_pred C
Confidence 7
No 380
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=74.14 E-value=0.94 Score=40.66 Aligned_cols=87 Identities=13% Similarity=0.088 Sum_probs=51.7
Q ss_pred HhcCCCCCCEEEEECC-C-CCHHHHHHHh-cCCCcEEEEeCCCCCCc-------eeeecCCCCCCC-------CCCeeEE
Q 025071 109 QRHFLFNESKALSIGA-R-VGQEVAALKL-VGVSDSIGIDLVPRPPL-------VIKGDFHAQPFD-------NGTFDFE 171 (258)
Q Consensus 109 ~~~~l~~~~~VLDIGc-G-tG~~~~~L~~-~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf~-------d~SFD~V 171 (258)
+...+.++.+||-.|+ | .|..+..+++ .|. +|+++|.++.... -...|...-.+. .+.+|+|
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvv 239 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDII 239 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEE
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEE
Confidence 3445678899999953 3 4555555544 575 7999997542110 011111111110 2469999
Q ss_pred EeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 172 FSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 172 ~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+.++=. ..+.+..+.|+|||+++..
T Consensus 240 id~~g~------~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 240 LDMIGA------AYFERNIASLAKDGCLSII 264 (353)
T ss_dssp EESCCG------GGHHHHHHTEEEEEEEEEC
T ss_pred EECCCH------HHHHHHHHHhccCCEEEEE
Confidence 985211 1457888999999998775
No 381
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=73.96 E-value=18 Score=32.08 Aligned_cols=89 Identities=21% Similarity=0.158 Sum_probs=48.8
Q ss_pred HHHhcCCCCCCEEEEECC--CCCHHHHHHHh-cCCCcEEEE-eCCCCC------------Cceeee------cCCCCCCC
Q 025071 107 LKQRHFLFNESKALSIGA--RVGQEVAALKL-VGVSDSIGI-DLVPRP------------PLVIKG------DFHAQPFD 164 (258)
Q Consensus 107 L~~~~~l~~~~~VLDIGc--GtG~~~~~L~~-~g~~~v~Gv-D~s~~~------------~~~~~a------Da~~LPf~ 164 (258)
+.....+.++.+||-+|+ |.|..+..+++ .|. +++++ +..+.. ..++.. +..++--.
T Consensus 159 l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~ 237 (357)
T 1zsy_A 159 LMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKD 237 (357)
T ss_dssp HHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSS
T ss_pred HHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhC
Confidence 333345778999999997 35666666665 575 45444 432210 011111 11111101
Q ss_pred CCCeeEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 165 NGTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 165 d~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
...+|+|+.++= .....+..+.|+|||+++..
T Consensus 238 ~~~~Dvvid~~g------~~~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 238 MPQPRLALNCVG------GKSSTELLRQLARGGTMVTY 269 (357)
T ss_dssp SCCCSEEEESSC------HHHHHHHHTTSCTTCEEEEC
T ss_pred CCCceEEEECCC------cHHHHHHHHhhCCCCEEEEE
Confidence 114899987421 11235688999999998875
No 382
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=73.39 E-value=6.2 Score=35.41 Aligned_cols=84 Identities=18% Similarity=0.006 Sum_probs=48.3
Q ss_pred CCC-CCCEEEEECCCC-CHHHHHHHh-cCCCcEEEEeCCCCCCce--------eeecCCC---CCCCCCCeeEEEecc-c
Q 025071 112 FLF-NESKALSIGARV-GQEVAALKL-VGVSDSIGIDLVPRPPLV--------IKGDFHA---QPFDNGTFDFEFSNV-F 176 (258)
Q Consensus 112 ~l~-~~~~VLDIGcGt-G~~~~~L~~-~g~~~v~GvD~s~~~~~~--------~~aDa~~---LPf~d~SFD~V~s~~-l 176 (258)
.+. ++.+||-+|+|. |..+..+++ .|. +|+++|.++..... ...|..+ +.-..+.+|+|+.++ .
T Consensus 183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~ 261 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSA 261 (366)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCc
Confidence 355 789999999753 444444444 575 79999976432100 1111110 000013699999752 1
Q ss_pred cccCChHHHHHHHHhcccCCcEEEEE
Q 025071 177 DHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 177 ~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
.. .+++..+.|+|||+++..
T Consensus 262 ~~------~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 262 VH------PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp CC------CSHHHHHHEEEEEEEEEC
T ss_pred HH------HHHHHHHHHhcCCEEEEE
Confidence 11 235778899999998775
No 383
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=73.19 E-value=1.6 Score=39.08 Aligned_cols=88 Identities=23% Similarity=0.170 Sum_probs=49.3
Q ss_pred HHHHhcCCCCCCEEEEECCC--CCHHHHHHHh-cCCCcEEEEeCCCCC-------CceeeecCCCCCC-------CCCCe
Q 025071 106 DLKQRHFLFNESKALSIGAR--VGQEVAALKL-VGVSDSIGIDLVPRP-------PLVIKGDFHAQPF-------DNGTF 168 (258)
Q Consensus 106 ~L~~~~~l~~~~~VLDIGcG--tG~~~~~L~~-~g~~~v~GvD~s~~~-------~~~~~aDa~~LPf-------~d~SF 168 (258)
.+.+...+.++.+||=.|++ .|..+..+++ .|...|++++..... ..++ | ..-.+ ..+.+
T Consensus 133 ~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~~~~~~~~~~ga~~~~--~-~~~~~~~~~~~~~~~g~ 209 (349)
T 4a27_A 133 MLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHLF--D-RNADYVQEVKRISAEGV 209 (349)
T ss_dssp HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEECGGGHHHHGGGSSEEE--E-TTSCHHHHHHHHCTTCE
T ss_pred HHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHcCCcEEE--c-CCccHHHHHHHhcCCCc
Confidence 33344567789999999983 3556666665 455578888732110 0011 1 11111 13579
Q ss_pred eEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 169 DFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 169 D~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
|+|+.++= ...+.+..+.|+|||++++.
T Consensus 210 Dvv~d~~g------~~~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 210 DIVLDCLC------GDNTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp EEEEEECC-------------CTTEEEEEEEEEE
T ss_pred eEEEECCC------chhHHHHHHHhhcCCEEEEE
Confidence 99997421 11236788999999999875
No 384
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=72.24 E-value=4.5 Score=35.62 Aligned_cols=89 Identities=10% Similarity=-0.050 Sum_probs=52.4
Q ss_pred HhcCCCCCCEEEEECCCCCH-HHHHHH-hcCCCcEEEEeCCCCCCc-------eeeecCCCCCC--------CCCCeeEE
Q 025071 109 QRHFLFNESKALSIGARVGQ-EVAALK-LVGVSDSIGIDLVPRPPL-------VIKGDFHAQPF--------DNGTFDFE 171 (258)
Q Consensus 109 ~~~~l~~~~~VLDIGcGtG~-~~~~L~-~~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf--------~d~SFD~V 171 (258)
....+.++.+||=.|+|... .+..++ ..|...++++|.++.... -...|..+..+ ...-+|+|
T Consensus 154 ~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v 233 (346)
T 4a2c_A 154 HLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLI 233 (346)
T ss_dssp HHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEE
T ss_pred HHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcccc
Confidence 33456788999999987533 333444 467766788997642110 01111111111 12457887
Q ss_pred EeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 172 FSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 172 ~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+..+ --...+++..+.|+|||.+++.
T Consensus 234 ~d~~-----G~~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 234 LETA-----GVPQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp EECS-----CSHHHHHHHHHHCCTTCEEEEC
T ss_pred cccc-----cccchhhhhhheecCCeEEEEE
Confidence 7642 1134567889999999998875
No 385
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=70.88 E-value=2.3 Score=37.39 Aligned_cols=85 Identities=18% Similarity=0.060 Sum_probs=50.7
Q ss_pred HhcCCCCCCEEEEEC-CC-CCHHHHHHHh-cCCCcEEEEeCCCCC--------CceeeecCCCCC-CC--CCCeeEEEec
Q 025071 109 QRHFLFNESKALSIG-AR-VGQEVAALKL-VGVSDSIGIDLVPRP--------PLVIKGDFHAQP-FD--NGTFDFEFSN 174 (258)
Q Consensus 109 ~~~~l~~~~~VLDIG-cG-tG~~~~~L~~-~g~~~v~GvD~s~~~--------~~~~~aDa~~LP-f~--d~SFD~V~s~ 174 (258)
+...+.++.+||=+| +| .|..+..+++ .|. +|++++..... ..++ |..+-. +. -..+|+|+.+
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~~~~~~~~~~lGa~~~i--~~~~~~~~~~~~~g~D~v~d~ 222 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTASKRNHAFLKALGAEQCI--NYHEEDFLLAISTPVDAVIDL 222 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEECHHHHHHHHHHTCSEEE--ETTTSCHHHHCCSCEEEEEES
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeccchHHHHHHcCCCEEE--eCCCcchhhhhccCCCEEEEC
Confidence 445678899999997 55 4556656654 575 78888732110 0111 111111 11 1469999874
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+= .....+..+.|+|||+++..
T Consensus 223 ~g------~~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 223 VG------GDVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp SC------HHHHHHHGGGEEEEEEEEEC
T ss_pred CC------cHHHHHHHHhccCCCEEEEe
Confidence 21 12237899999999998875
No 386
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=68.49 E-value=12 Score=34.31 Aligned_cols=83 Identities=16% Similarity=0.055 Sum_probs=50.4
Q ss_pred cCCCCCCEEEEECC-C-CCHHHHHHHh-cCCCcEEEEeCCCCC---------CceeeecCCCCCCC--------------
Q 025071 111 HFLFNESKALSIGA-R-VGQEVAALKL-VGVSDSIGIDLVPRP---------PLVIKGDFHAQPFD-------------- 164 (258)
Q Consensus 111 ~~l~~~~~VLDIGc-G-tG~~~~~L~~-~g~~~v~GvD~s~~~---------~~~~~aDa~~LPf~-------------- 164 (258)
..+.++.+||-.|+ | .|..+..+++ .|. +|++++.++.. ..++. ..+..+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~--~~~~~~~~~~~~~~~~~~~~~ 292 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRALGCDLVIN--RAELGITDDIADDPRRVVETG 292 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCCEEE--HHHHTCCTTGGGCHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEe--cccccccccccccccccchhh
Confidence 45678899999997 3 3555555554 565 78888864321 01111 1111110
Q ss_pred -----------CCCeeEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 165 -----------NGTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 165 -----------d~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
...+|+|+.++= ...+++..+.|++||+++..
T Consensus 293 ~~~~~~v~~~~g~g~Dvvid~~G------~~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 293 RKLAKLVVEKAGREPDIVFEHTG------RVTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHSSCCSEEEECSC------HHHHHHHHHHSCTTCEEEES
T ss_pred hHHHHHHHHHhCCCceEEEECCC------chHHHHHHHHHhcCCEEEEE
Confidence 246899987521 13567888999999998875
No 387
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=67.14 E-value=27 Score=28.84 Aligned_cols=86 Identities=17% Similarity=0.176 Sum_probs=52.1
Q ss_pred CCEEEEECCCCCHHHHHHHhc-CCCcEEEEeCC--------CCCCceeeecCCC-CCCC----CCCeeEEEeccccccCC
Q 025071 116 ESKALSIGARVGQEVAALKLV-GVSDSIGIDLV--------PRPPLVIKGDFHA-QPFD----NGTFDFEFSNVFDHALY 181 (258)
Q Consensus 116 ~~~VLDIGcGtG~~~~~L~~~-g~~~v~GvD~s--------~~~~~~~~aDa~~-LPf~----d~SFD~V~s~~l~h~~~ 181 (258)
.+-|||+|-|+|+.-..|++. ...+++.+|.. +....++.||+.+ ||.. ....-++... +-. -+
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~tL~~~~~r~g~~a~LaHaD-~G~-g~ 118 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDSTPPEAQLILGDIRETLPATLERFGATASLVHAD-LGG-HN 118 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGCCCGGGEEESCHHHHHHHHHHHHCSCEEEEEEC-CCC-SC
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCCCchHheecccHHHHHHHHHHhcCCceEEEEee-cCC-CC
Confidence 456999999999999999874 44689999952 1112477777653 3432 2233333332 110 02
Q ss_pred hHH-------HHHHHHhcccCCcEEEEEe
Q 025071 182 PWK-------FVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 182 p~~-------~l~Ei~RVLKPGG~lii~v 203 (258)
+++ .-.=|..+|.|||+++-..
T Consensus 119 ~~~d~a~a~~lsplI~~~la~GGi~vS~~ 147 (174)
T 3iht_A 119 REKNDRFARLISPLIEPHLAQGGLMVSSD 147 (174)
T ss_dssp HHHHHHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred cchhHHHHHhhhHHHHHHhcCCcEEEeCC
Confidence 222 1245788999999886543
No 388
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=64.54 E-value=6.1 Score=35.70 Aligned_cols=80 Identities=16% Similarity=0.160 Sum_probs=44.9
Q ss_pred CCCCCHHHHHHHhcCCCcEEEEeCC--------------CCCCceeeecCCCCCCCCCCeeEEEec-----cccc-c--C
Q 025071 123 GARVGQEVAALKLVGVSDSIGIDLV--------------PRPPLVIKGDFHAQPFDNGTFDFEFSN-----VFDH-A--L 180 (258)
Q Consensus 123 GcGtG~~~~~L~~~g~~~v~GvD~s--------------~~~~~~~~aDa~~LPf~d~SFD~V~s~-----~l~h-~--~ 180 (258)
.++.|.....+.+.....|.-||-. +........|+.. |-..+.+|+|+|+ .-+| . .
T Consensus 149 ~~~~~~~~~~~~k~~g~~vl~v~~~~~~p~k~v~wi~Pi~GAt~~~~lDfg~-p~~~~k~DvV~SDMApn~sGh~yqQC~ 227 (320)
T 2hwk_A 149 EHPQSDFSSFVSKLKGRTVLVVGEKLSVPGKMVDWLSDRPEATFRARLDLGI-PGDVPKYDIIFVNVRTPYKYHHYQQCE 227 (320)
T ss_dssp CCCCCCCHHHHHTSSCSEEEEEESCCCCTTSEEEEEESSTTCSEECCGGGCS-CTTSCCEEEEEEECCCCCCSCHHHHHH
T ss_pred ccCCCCHHHHHhhCCCcEEEEEecccccCCceeEeeccCCCceeecccccCC-ccccCcCCEEEEcCCCCCCCccccccc
Confidence 4666667767766533456656521 1111111344432 3333679999995 1223 1 1
Q ss_pred Ch----HHHHHHHHhcccCCcEEEEEe
Q 025071 181 YP----WKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 181 ~p----~~~l~Ei~RVLKPGG~lii~v 203 (258)
|- ..+++-..++|+|||.+++-+
T Consensus 228 DHarii~Lal~fA~~vLkPGGtfV~Kv 254 (320)
T 2hwk_A 228 DHAIKLSMLTKKACLHLNPGGTCVSIG 254 (320)
T ss_dssp HHHHHHHHTHHHHGGGEEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHHHhcCCCceEEEEE
Confidence 22 224577889999999998864
No 389
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=61.01 E-value=55 Score=28.99 Aligned_cols=118 Identities=9% Similarity=0.023 Sum_probs=65.3
Q ss_pred CEEEEECCCCCHHHHHHHhcCCCcEEEEeCC----------------CC-CCceeeecCCCCCCC----CCCee-----E
Q 025071 117 SKALSIGARVGQEVAALKLVGVSDSIGIDLV----------------PR-PPLVIKGDFHAQPFD----NGTFD-----F 170 (258)
Q Consensus 117 ~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s----------------~~-~~~~~~aDa~~LPf~----d~SFD-----~ 170 (258)
..|+++|||--..+..+..-....++-||.- +. ....+.+|+.+ ... ...|| +
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt~ 182 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSARTA 182 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCEE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCCEE
Confidence 4799999998776665542112468888830 00 11245566654 211 11122 3
Q ss_pred EEec-cccccCC--hHHHHHHHHhcccCCcEEEEEecccc-C-c---------CcCC--C-------CCC--C-C-hhHH
Q 025071 171 EFSN-VFDHALY--PWKFVGEIERTLKPAGVCVLHVALSR-R-A---------DKYS--A-------NDL--F-S-VKPL 223 (258)
Q Consensus 171 V~s~-~l~h~~~--p~~~l~Ei~RVLKPGG~lii~v~~~~-~-~---------~~y~--~-------~~~--~-s-~~~l 223 (258)
+++. ++.++.. ....++.+...+.||+.+++...... . . ..+. . ..+ + + .+++
T Consensus 183 ~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~ 262 (310)
T 2uyo_A 183 WLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEWREQMQLRFRRVSDALGFEQAVDVQELIYHDENRAVV 262 (310)
T ss_dssp EEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTCSHHHHHHHHHHHHHHC-----------CCTTCCTTCCCH
T ss_pred EEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCCcchhHHHHHHHHHHHHHcCCcCCCCccccccCCCChHHH
Confidence 3343 5555542 34567888888889999888743211 0 0 1111 1 112 2 4 6789
Q ss_pred HHHhhcCceEEe
Q 025071 224 VKLFRESELVAV 235 (258)
Q Consensus 224 ~~lf~~~~~~~v 235 (258)
.++|.+.|+..+
T Consensus 263 ~~~f~~~G~~~~ 274 (310)
T 2uyo_A 263 ADWLNRHGWRAT 274 (310)
T ss_dssp HHHHTTTTEEEE
T ss_pred HHHHHHCcCccc
Confidence 999998888655
No 390
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=60.61 E-value=9.3 Score=38.52 Aligned_cols=85 Identities=16% Similarity=0.108 Sum_probs=52.4
Q ss_pred cCCCCCCEEEEECC--CCCHHHHHHHh-cCCCcEEEEeCCCCCCce-----eeecCCCCCCC--------CCCeeEEEec
Q 025071 111 HFLFNESKALSIGA--RVGQEVAALKL-VGVSDSIGIDLVPRPPLV-----IKGDFHAQPFD--------NGTFDFEFSN 174 (258)
Q Consensus 111 ~~l~~~~~VLDIGc--GtG~~~~~L~~-~g~~~v~GvD~s~~~~~~-----~~aDa~~LPf~--------d~SFD~V~s~ 174 (258)
..+.++.+||=.|+ |.|..+..+++ .|. +|++++.++..... ...|.....|. ...+|+|+.+
T Consensus 341 a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~k~~~l~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~ 419 (795)
T 3slk_A 341 AGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASEDKWQAVELSREHLASSRTCDFEQQFLGATGGRGVDVVLNS 419 (795)
T ss_dssp TCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGGGGGGSCSCGGGEECSSSSTHHHHHHHHSCSSCCSEEEEC
T ss_pred hCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChHHhhhhhcChhheeecCChhHHHHHHHHcCCCCeEEEEEC
Confidence 34678899999995 45666666665 575 79998854311100 11122222221 2369999974
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
. .. ..+.+..+.|+|||+++..
T Consensus 420 ~-gg-----~~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 420 L-AG-----EFADASLRMLPRGGRFLEL 441 (795)
T ss_dssp C-CT-----TTTHHHHTSCTTCEEEEEC
T ss_pred C-Cc-----HHHHHHHHHhcCCCEEEEe
Confidence 2 11 2347889999999998875
No 391
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=60.46 E-value=3.5 Score=36.65 Aligned_cols=83 Identities=16% Similarity=0.118 Sum_probs=51.1
Q ss_pred HhcCCCCCCEEEEECC-C-CCHHHHHHHh-cCCCcEEEEeCCCCC--------CceeeecCCCCCC--------CCCCee
Q 025071 109 QRHFLFNESKALSIGA-R-VGQEVAALKL-VGVSDSIGIDLVPRP--------PLVIKGDFHAQPF--------DNGTFD 169 (258)
Q Consensus 109 ~~~~l~~~~~VLDIGc-G-tG~~~~~L~~-~g~~~v~GvD~s~~~--------~~~~~aDa~~LPf--------~d~SFD 169 (258)
+...+.++.+||-+|+ | .|..+..+++ .|. +|+++ .++.. ... .| ..-.+ ....+|
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~--i~-~~~~~~~~~~~~~~~~g~D 218 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP--ID-ASREPEDYAAEHTAGQGFD 218 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE--EE-TTSCHHHHHHHHHTTSCEE
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE--ec-cCCCHHHHHHHHhcCCCce
Confidence 4455778999999995 3 4555555554 575 78888 43211 111 11 11111 124699
Q ss_pred EEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 170 FEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 170 ~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+|+.++= ...+.+..+.|+|||+++..
T Consensus 219 ~vid~~g------~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 219 LVYDTLG------GPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp EEEESSC------THHHHHHHHHEEEEEEEEES
T ss_pred EEEECCC------cHHHHHHHHHHhcCCeEEEE
Confidence 9987521 13568889999999998875
No 392
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=57.19 E-value=14 Score=32.96 Aligned_cols=84 Identities=14% Similarity=0.016 Sum_probs=48.8
Q ss_pred CCCCCEEEEECC-C-CCHHHHHHHh-cCCCcEEEEeCCCCCCce-------eeecCCCCCC-----CCCCeeEEEecccc
Q 025071 113 LFNESKALSIGA-R-VGQEVAALKL-VGVSDSIGIDLVPRPPLV-------IKGDFHAQPF-----DNGTFDFEFSNVFD 177 (258)
Q Consensus 113 l~~~~~VLDIGc-G-tG~~~~~L~~-~g~~~v~GvD~s~~~~~~-------~~aDa~~LPf-----~d~SFD~V~s~~l~ 177 (258)
+.++.+||-.|+ | .|..+..+++ .|. +|++++ ++..... ...|..+-.+ +...+|+|+.++=
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g- 257 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVG- 257 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSC-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCC-
Confidence 678899999993 4 4555555554 575 788888 3321100 1111111111 1136899987421
Q ss_pred ccCChHHHHHHHHhcccCCcEEEEE
Q 025071 178 HALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 178 h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
.+...+.+..+.|+|||+++..
T Consensus 258 ---~~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 258 ---GSTETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp ---TTHHHHGGGGBCSSSCCEEEES
T ss_pred ---ChhhhhHHHHHhhcCCcEEEEe
Confidence 2223456788999999998775
No 393
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=56.25 E-value=44 Score=25.23 Aligned_cols=83 Identities=11% Similarity=0.048 Sum_probs=49.5
Q ss_pred CCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCC--------CCceeeecCCCCCC----CCCCeeEEEeccccccCC
Q 025071 116 ESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPR--------PPLVIKGDFHAQPF----DNGTFDFEFSNVFDHALY 181 (258)
Q Consensus 116 ~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~--------~~~~~~aDa~~LPf----~d~SFD~V~s~~l~h~~~ 181 (258)
..+|+=+|||. |. .+..|.+.|. +|+++|.++. ...++.+|+..... .-+.+|+|++.. . +
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~-~---~ 81 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTI-P---N 81 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECC-S---C
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEEC-C---C
Confidence 35789999974 33 3445666776 7999998642 22356676643211 124689888741 1 1
Q ss_pred hH--HHHHHHHhcccCCcEEEEEe
Q 025071 182 PW--KFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 182 p~--~~l~Ei~RVLKPGG~lii~v 203 (258)
.. ..+....|-+.|+..++...
T Consensus 82 ~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 82 GYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred hHHHHHHHHHHHHHCCCCeEEEEE
Confidence 22 22345677788888766654
No 394
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=55.06 E-value=16 Score=32.64 Aligned_cols=82 Identities=11% Similarity=0.032 Sum_probs=49.0
Q ss_pred CCCCEEEEECCC--CCHHHHHHHh-cCCCcEEEEeCCCCCCc-------eeeecCCCCCC-------CCCCeeEEEeccc
Q 025071 114 FNESKALSIGAR--VGQEVAALKL-VGVSDSIGIDLVPRPPL-------VIKGDFHAQPF-------DNGTFDFEFSNVF 176 (258)
Q Consensus 114 ~~~~~VLDIGcG--tG~~~~~L~~-~g~~~v~GvD~s~~~~~-------~~~aDa~~LPf-------~d~SFD~V~s~~l 176 (258)
.++.+||=+|++ .|..+..+++ .|. +|+++. ++.... -...|...-.+ .++.+|+|+.++=
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g 240 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCIT 240 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCC
Confidence 678899999984 5777766665 575 788875 432110 01111111111 1245999987421
Q ss_pred cccCChHHHHHHHHhcc-cCCcEEEEE
Q 025071 177 DHALYPWKFVGEIERTL-KPAGVCVLH 202 (258)
Q Consensus 177 ~h~~~p~~~l~Ei~RVL-KPGG~lii~ 202 (258)
-...+....+.| ++||+++..
T Consensus 241 -----~~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 241 -----NVESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp -----SHHHHHHHHHHSCTTCEEEEES
T ss_pred -----chHHHHHHHHHhhcCCCEEEEE
Confidence 124467788889 699998775
No 395
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=54.75 E-value=91 Score=25.81 Aligned_cols=81 Identities=15% Similarity=0.016 Sum_probs=48.0
Q ss_pred CEEEEECCCCCHHHHHH----HhcCCCcEEEEeCCCC--------CCceeeecCCCCCCCCCCeeEEEec-cccccCChH
Q 025071 117 SKALSIGARVGQEVAAL----KLVGVSDSIGIDLVPR--------PPLVIKGDFHAQPFDNGTFDFEFSN-VFDHALYPW 183 (258)
Q Consensus 117 ~~VLDIGcGtG~~~~~L----~~~g~~~v~GvD~s~~--------~~~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~p~ 183 (258)
.+||=.|| |..+..+ .+.|+ +|++++.++. ...++.+|..++. -..+|+|+.. ......++.
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~~~~~~~ 80 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPDSGGDPV 80 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCBTTBCHH
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCccccccHH
Confidence 58999995 7776554 44575 7999997643 2246778888766 4578999874 322222332
Q ss_pred -HHHHHHHhcccCC-cEEEEE
Q 025071 184 -KFVGEIERTLKPA-GVCVLH 202 (258)
Q Consensus 184 -~~l~Ei~RVLKPG-G~lii~ 202 (258)
+.+-+..+-.+.| ++++..
T Consensus 81 ~~~l~~a~~~~~~~~~~~v~~ 101 (286)
T 3ius_A 81 LAALGDQIAARAAQFRWVGYL 101 (286)
T ss_dssp HHHHHHHHHHTGGGCSEEEEE
T ss_pred HHHHHHHHHhhcCCceEEEEe
Confidence 2333444433223 455554
No 396
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=53.78 E-value=11 Score=33.42 Aligned_cols=85 Identities=18% Similarity=0.116 Sum_probs=48.5
Q ss_pred cCCCCC-CEEEEECC-C-CCHHHHHHHh-cCCCcEEEEeCCCCC-----C--------ceeeecC---CCCC--C-----
Q 025071 111 HFLFNE-SKALSIGA-R-VGQEVAALKL-VGVSDSIGIDLVPRP-----P--------LVIKGDF---HAQP--F----- 163 (258)
Q Consensus 111 ~~l~~~-~~VLDIGc-G-tG~~~~~L~~-~g~~~v~GvD~s~~~-----~--------~~~~aDa---~~LP--f----- 163 (258)
..+.++ .+||=.|+ | .|..+..+++ .|. +++++..+... . .++..+. .++. .
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~ 240 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIK 240 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHH
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhh
Confidence 356788 99999997 3 4555555554 575 67777643322 0 0111110 1100 0
Q ss_pred -CCCCeeEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 164 -DNGTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 164 -~d~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
....+|+|+.++= -... .+..+.|+|||+++..
T Consensus 241 ~~~~g~Dvvid~~G-----~~~~-~~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 241 QSGGEAKLALNCVG-----GKSS-TGIARKLNNNGLMLTY 274 (364)
T ss_dssp HHTCCEEEEEESSC-----HHHH-HHHHHTSCTTCEEEEC
T ss_pred ccCCCceEEEECCC-----chhH-HHHHHHhccCCEEEEe
Confidence 1246999987421 1122 3778999999998775
No 397
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=53.58 E-value=13 Score=32.89 Aligned_cols=60 Identities=18% Similarity=0.308 Sum_probs=44.4
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCc--EEEEeCCCC---------CC-ceeeecCCCCCCCC----CCeeEEEec
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSD--SIGIDLVPR---------PP-LVIKGDFHAQPFDN----GTFDFEFSN 174 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~--v~GvD~s~~---------~~-~~~~aDa~~LPf~d----~SFD~V~s~ 174 (258)
...+++|+=||.|.....+.+.|+.. |.++|+++. +. .+..+|+.++.-.+ ..+|+++.+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEec
Confidence 45689999999999999999999754 689998642 22 35678887764321 369999874
No 398
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=53.05 E-value=22 Score=33.62 Aligned_cols=81 Identities=15% Similarity=0.199 Sum_probs=51.4
Q ss_pred CEEEEECCCC--CHHHHHHHhcCCCcEEEEeCCCCCC----------c-----------------e-eeecCCCCCCCCC
Q 025071 117 SKALSIGARV--GQEVAALKLVGVSDSIGIDLVPRPP----------L-----------------V-IKGDFHAQPFDNG 166 (258)
Q Consensus 117 ~~VLDIGcGt--G~~~~~L~~~g~~~v~GvD~s~~~~----------~-----------------~-~~aDa~~LPf~d~ 166 (258)
.+|--||+|+ +.++..+++.|+ +|+..|.++... . + ...|.+ .-.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~----al~ 129 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH----KLS 129 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG----GCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH----HHc
Confidence 5799999985 334566777886 799999864310 0 0 111221 123
Q ss_pred CeeEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 167 TFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 167 SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
..|+|+.++.+...-...+++|+..+++||-+++-.
T Consensus 130 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasn 165 (460)
T 3k6j_A 130 NCDLIVESVIEDMKLKKELFANLENICKSTCIFGTN 165 (460)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEEC
T ss_pred cCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEec
Confidence 579998865543322346779999999998877543
No 399
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=53.04 E-value=25 Score=32.93 Aligned_cols=80 Identities=18% Similarity=0.243 Sum_probs=48.7
Q ss_pred CEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCc-----------------------------eeeecCCCCCCCC
Q 025071 117 SKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPL-----------------------------VIKGDFHAQPFDN 165 (258)
Q Consensus 117 ~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~-----------------------------~~~aDa~~LPf~d 165 (258)
.+|.-||+|+ |. ++..+++.|. +|+.+|.++.... .+..|.+ .-
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~----~~ 112 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK----EL 112 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGG----GG
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHH----HH
Confidence 4799999996 32 4556667786 7999998642100 0111111 11
Q ss_pred CCeeEEEeccccccCChHHHHHHHHhcccCCcEEEE
Q 025071 166 GTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVL 201 (258)
Q Consensus 166 ~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii 201 (258)
...|+|+.++.+...-...+++++..+++||.+++-
T Consensus 113 ~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 113 STVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp TTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 357999886544322225677889999999876654
No 400
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=52.78 E-value=41 Score=26.39 Aligned_cols=85 Identities=20% Similarity=0.207 Sum_probs=47.6
Q ss_pred CCEEEEECCCC-CH-HHHHHHhc-CCCcEEEEeCCCC--------CCceeeecCCCCC----C-CCCCeeEEEecccccc
Q 025071 116 ESKALSIGARV-GQ-EVAALKLV-GVSDSIGIDLVPR--------PPLVIKGDFHAQP----F-DNGTFDFEFSNVFDHA 179 (258)
Q Consensus 116 ~~~VLDIGcGt-G~-~~~~L~~~-g~~~v~GvD~s~~--------~~~~~~aDa~~LP----f-~d~SFD~V~s~~l~h~ 179 (258)
+.+|+=+|||. |. .+..|.+. |. +|+++|.++. ...++.+|..+.. . .-+.+|+|+... ...
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~-~~~ 116 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAM-PHH 116 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECC-SSH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeC-CCh
Confidence 56799999873 32 23456666 75 7999998642 1234556654311 1 124689888742 110
Q ss_pred CChHHHHHHHHhcccCCcEEEEEe
Q 025071 180 LYPWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 180 ~~p~~~l~Ei~RVLKPGG~lii~v 203 (258)
.....+-+..|-+.|++.++...
T Consensus 117 -~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 117 -QGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp -HHHHHHHHHHHHTTCCSEEEEEE
T ss_pred -HHHHHHHHHHHHHCCCCEEEEEE
Confidence 01122345666677777777654
No 401
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=49.84 E-value=35 Score=29.86 Aligned_cols=68 Identities=19% Similarity=0.183 Sum_probs=39.3
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCCH---HHHHHHhcCCCcEEEEeCCCCCC-----------ceeeecCCCCCCCCCCe
Q 025071 103 FFQDLKQRHFLFNESKALSIGARVGQ---EVAALKLVGVSDSIGIDLVPRPP-----------LVIKGDFHAQPFDNGTF 168 (258)
Q Consensus 103 ~~~~L~~~~~l~~~~~VLDIGcGtG~---~~~~L~~~g~~~v~GvD~s~~~~-----------~~~~aDa~~LPf~d~SF 168 (258)
+.+.|.+.+.-..+.+||=+|+| |. .+..|.+.|..+|+-++.++... .+...+.++++ ..+
T Consensus 113 ~~~~L~~~~~~l~~k~vlvlGaG-g~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~---~~a 188 (281)
T 3o8q_A 113 LVQDLLAQQVLLKGATILLIGAG-GAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLK---QSY 188 (281)
T ss_dssp HHHHHHHTTCCCTTCEEEEECCS-HHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCC---SCE
T ss_pred HHHHHHHhCCCccCCEEEEECch-HHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhc---CCC
Confidence 44444333333367899999987 32 23456667876788888653210 12222333443 579
Q ss_pred eEEEec
Q 025071 169 DFEFSN 174 (258)
Q Consensus 169 D~V~s~ 174 (258)
|+|++.
T Consensus 189 DiIIna 194 (281)
T 3o8q_A 189 DVIINS 194 (281)
T ss_dssp EEEEEC
T ss_pred CEEEEc
Confidence 999985
No 402
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=49.31 E-value=4.7 Score=34.94 Aligned_cols=82 Identities=11% Similarity=0.036 Sum_probs=47.1
Q ss_pred CEEEEECCCC-C-HHHHHHHhcCCCcEEEEeCCCCCCc----e--------------------------eeecCCCCCCC
Q 025071 117 SKALSIGARV-G-QEVAALKLVGVSDSIGIDLVPRPPL----V--------------------------IKGDFHAQPFD 164 (258)
Q Consensus 117 ~~VLDIGcGt-G-~~~~~L~~~g~~~v~GvD~s~~~~~----~--------------------------~~aDa~~LPf~ 164 (258)
.+|.=||+|+ | ..+..+++.|. +|+..|.++.... . +.. ..++.-.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 4788888875 2 23445566786 7999998642110 0 000 0111000
Q ss_pred CCCeeEEEeccccccCChHHHHHHHHhcccCCcEEE
Q 025071 165 NGTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCV 200 (258)
Q Consensus 165 d~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~li 200 (258)
-...|+|+.++-+.......+++++...++||..++
T Consensus 83 ~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 83 VKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp TTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred hccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEE
Confidence 135799988654433233566789999999987654
No 403
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=46.04 E-value=15 Score=35.06 Aligned_cols=32 Identities=9% Similarity=0.050 Sum_probs=28.2
Q ss_pred CEEEEECCCCCHHHHHHHhcCCCcEEEEeCCC
Q 025071 117 SKALSIGARVGQEVAALKLVGVSDSIGIDLVP 148 (258)
Q Consensus 117 ~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~ 148 (258)
-+++|+=||.|.....+.+.|+..|.++|+.+
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~~v~avE~d~ 120 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQCVFTSEWNK 120 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEEEEEEECCCH
T ss_pred ceEEEecCCccHHHHHHHHCCCEEEEEEeCCH
Confidence 48999999999999999988986788999853
No 404
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=45.39 E-value=1.4e+02 Score=25.79 Aligned_cols=112 Identities=21% Similarity=0.219 Sum_probs=58.9
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHH--HHHHHhcCCCcEEEEeCCCCC-------------CceeeecCCCCCCCCCC
Q 025071 103 FFQDLKQRHFLFNESKALSIGARVGQE--VAALKLVGVSDSIGIDLVPRP-------------PLVIKGDFHAQPFDNGT 167 (258)
Q Consensus 103 ~~~~L~~~~~l~~~~~VLDIGcGtG~~--~~~L~~~g~~~v~GvD~s~~~-------------~~~~~aDa~~LPf~d~S 167 (258)
+.+.|.+.+.-..+.++|=+|+|...- +.+|.+.|..+++-++.+... ........ -.-+.
T Consensus 112 f~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~----~~~~~ 187 (269)
T 3tum_A 112 FLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQF----SGLED 187 (269)
T ss_dssp HHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCC----SCSTT
T ss_pred HHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhh----hhhhc
Confidence 444454444434678999999985543 345667787777777754211 11111111 12356
Q ss_pred eeEEEec-c--cc-ccCChHHHHHHHHhcccCCcEEEEEeccccCcCcCCCCCCCChhHHHHHhhcCce
Q 025071 168 FDFEFSN-V--FD-HALYPWKFVGEIERTLKPAGVCVLHVALSRRADKYSANDLFSVKPLVKLFRESEL 232 (258)
Q Consensus 168 FD~V~s~-~--l~-h~~~p~~~l~Ei~RVLKPGG~lii~v~~~~~~~~y~~~~~~s~~~l~~lf~~~~~ 232 (258)
+|+|++. . +. +...|- -.+....++|+..++=.+..+ ....+.+..++.|.
T Consensus 188 ~dliiNaTp~Gm~~~~~~p~--~~~~~~~l~~~~~v~D~vY~P------------~~T~ll~~A~~~G~ 242 (269)
T 3tum_A 188 FDLVANASPVGMGTRAELPL--SAALLATLQPDTLVADVVTSP------------EITPLLNRARQVGC 242 (269)
T ss_dssp CSEEEECSSTTCSTTCCCSS--CHHHHHTCCTTSEEEECCCSS------------SSCHHHHHHHHHTC
T ss_pred ccccccCCccccCCCCCCCC--ChHHHhccCCCcEEEEEccCC------------CCCHHHHHHHHCcC
Confidence 8999985 2 21 111111 124455688888665433211 12456666666654
No 405
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=44.44 E-value=10 Score=35.52 Aligned_cols=87 Identities=20% Similarity=0.268 Sum_probs=48.4
Q ss_pred CCCEEEEECCCC-CHHHH-HHHhcCCCcEEEEeCCCCCCcee---eecCCCCC------------CCC------------
Q 025071 115 NESKALSIGARV-GQEVA-ALKLVGVSDSIGIDLVPRPPLVI---KGDFHAQP------------FDN------------ 165 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~~~~-~L~~~g~~~v~GvD~s~~~~~~~---~aDa~~LP------------f~d------------ 165 (258)
++.+|+-+|+|. |..+. .+...|. +|++.|.++...... -++...++ |..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 467999999984 33333 3345675 899999875321000 00111111 111
Q ss_pred ------CCeeEEEeccc-cccCChHHHHHHHHhcccCCcEEEEE
Q 025071 166 ------GTFDFEFSNVF-DHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 166 ------~SFD~V~s~~l-~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
...|+|+..++ ..-..|..+-+|+.+.+|||.+++-.
T Consensus 268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDv 311 (405)
T 4dio_A 268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDL 311 (405)
T ss_dssp HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEET
T ss_pred HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEE
Confidence 35799987532 22122332347999999999887664
No 406
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=43.27 E-value=33 Score=29.80 Aligned_cols=58 Identities=16% Similarity=0.213 Sum_probs=34.4
Q ss_pred CCCCEEEEECCCCCH---HHHHHHhcCCCcEEEEeCCCCCC----------ceeeecCCCCCCCCCCeeEEEec
Q 025071 114 FNESKALSIGARVGQ---EVAALKLVGVSDSIGIDLVPRPP----------LVIKGDFHAQPFDNGTFDFEFSN 174 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~---~~~~L~~~g~~~v~GvD~s~~~~----------~~~~aDa~~LPf~d~SFD~V~s~ 174 (258)
..+.++|-+|+| |. .+.+|.+.|..+|+-++.+.... .+...+.++++ +..+|+|++.
T Consensus 118 l~~k~~lvlGaG-g~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~--~~~~DivIna 188 (272)
T 3pwz_A 118 LRNRRVLLLGAG-GAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALE--GQSFDIVVNA 188 (272)
T ss_dssp CTTSEEEEECCS-HHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGT--TCCCSEEEEC
T ss_pred ccCCEEEEECcc-HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhc--ccCCCEEEEC
Confidence 357899999997 33 23456677876788777653210 01122223332 2679999985
No 407
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=42.33 E-value=11 Score=34.83 Aligned_cols=87 Identities=20% Similarity=0.301 Sum_probs=48.2
Q ss_pred CCCEEEEECCCC-CHHH-HHHHhcCCCcEEEEeCCCCCC--------ceeeec--CCCC-----------------CCCC
Q 025071 115 NESKALSIGARV-GQEV-AALKLVGVSDSIGIDLVPRPP--------LVIKGD--FHAQ-----------------PFDN 165 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~~~-~~L~~~g~~~v~GvD~s~~~~--------~~~~aD--a~~L-----------------Pf~d 165 (258)
++.+|+=+|+|. |..+ ..+...|. +|+++|.++... .++..+ .... .+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 467999999984 3332 23445685 799999864321 111100 0000 0111
Q ss_pred --CCeeEEEecc-ccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 166 --GTFDFEFSNV-FDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 166 --~SFD~V~s~~-l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
...|+|+..+ ......|..+-+|+.+.+|||++++-.
T Consensus 262 ~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 262 AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 5789999753 222122322337999999998877654
No 408
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=41.76 E-value=15 Score=33.39 Aligned_cols=34 Identities=18% Similarity=0.273 Sum_probs=23.1
Q ss_pred CCCEEEEECCCCCH-HHH-HHHhcCCCcEEEEeCCCC
Q 025071 115 NESKALSIGARVGQ-EVA-ALKLVGVSDSIGIDLVPR 149 (258)
Q Consensus 115 ~~~~VLDIGcGtG~-~~~-~L~~~g~~~v~GvD~s~~ 149 (258)
++.+|+=+|+|.=. .+. .+...|. +|+.+|.++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 57899999998422 222 3345676 6999998753
No 409
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=41.39 E-value=13 Score=32.64 Aligned_cols=34 Identities=12% Similarity=-0.016 Sum_probs=23.0
Q ss_pred CCCEEEEECCCCCH--HHHHHHhcCCCcEEEEeCCC
Q 025071 115 NESKALSIGARVGQ--EVAALKLVGVSDSIGIDLVP 148 (258)
Q Consensus 115 ~~~~VLDIGcGtG~--~~~~L~~~g~~~v~GvD~s~ 148 (258)
.+.+||=+|+|.-. .+..|.+.|..+|+-++.+.
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 56789999987211 23456677876788787654
No 410
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=40.14 E-value=35 Score=30.50 Aligned_cols=81 Identities=20% Similarity=0.210 Sum_probs=44.2
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCc-eee-ecCCCCCCCCCCeeEEEec-----cccccCChHHH
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPL-VIK-GDFHAQPFDNGTFDFEFSN-----VFDHALYPWKF 185 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~-~~~-aDa~~LPf~d~SFD~V~s~-----~l~h~~~p~~~ 185 (258)
.+.+|.=||+|. |. .+..+...|. +|++.|.++.... +.. ....++.---...|+|+.. .-.|+.+
T Consensus 136 ~gktvGIiGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~---- 210 (324)
T 3evt_A 136 TGQQLLIYGTGQIGQSLAAKASALGM-HVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFS---- 210 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBS----
T ss_pred cCCeEEEECcCHHHHHHHHHHHhCCC-EEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcC----
Confidence 467899999883 33 3445556776 7999998654321 100 0011111001246888763 1233332
Q ss_pred HHHHHhcccCCcEEEE
Q 025071 186 VGEIERTLKPAGVCVL 201 (258)
Q Consensus 186 l~Ei~RVLKPGG~lii 201 (258)
++....+|||.+++=
T Consensus 211 -~~~l~~mk~gailIN 225 (324)
T 3evt_A 211 -TELFQQTKQQPMLIN 225 (324)
T ss_dssp -HHHHHTCCSCCEEEE
T ss_pred -HHHHhcCCCCCEEEE
Confidence 456677899877654
No 411
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=39.46 E-value=31 Score=30.54 Aligned_cols=78 Identities=14% Similarity=-0.012 Sum_probs=42.7
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCCCCCeeEEEec-----cccccCChHHHHH
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFDNGTFDFEFSN-----VFDHALYPWKFVG 187 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~d~SFD~V~s~-----~l~h~~~p~~~l~ 187 (258)
.+.+|.=||+|. |. .+..+...|. +|++.|.++.... .+..++.---...|+|+.. ...|+.+ +
T Consensus 143 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~~---~~~~~l~ell~~aDvV~l~~p~~~~t~~li~-----~ 213 (311)
T 2cuk_A 143 QGLTLGLVGMGRIGQAVAKRALAFGM-RVVYHARTPKPLP---YPFLSLEELLKEADVVSLHTPLTPETHRLLN-----R 213 (311)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSSS---SCBCCHHHHHHHCSEEEECCCCCTTTTTCBC-----H
T ss_pred CCCEEEEEEECHHHHHHHHHHHHCCC-EEEEECCCCcccc---cccCCHHHHHhhCCEEEEeCCCChHHHhhcC-----H
Confidence 467899998873 22 2344455675 7999998654322 1111110001246888874 1233333 2
Q ss_pred HHHhcccCCcEEEE
Q 025071 188 EIERTLKPAGVCVL 201 (258)
Q Consensus 188 Ei~RVLKPGG~lii 201 (258)
+....+|||..++=
T Consensus 214 ~~l~~mk~ga~lin 227 (311)
T 2cuk_A 214 ERLFAMKRGAILLN 227 (311)
T ss_dssp HHHTTSCTTCEEEE
T ss_pred HHHhhCCCCcEEEE
Confidence 45567899877654
No 412
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=38.80 E-value=35 Score=29.97 Aligned_cols=80 Identities=11% Similarity=0.001 Sum_probs=43.7
Q ss_pred CC-CEEEEECCCCCH---HHHHHH-hcCCCcEEEEeCCCCCCce-------eeecCCCCCCC--------CCCeeEEEec
Q 025071 115 NE-SKALSIGARVGQ---EVAALK-LVGVSDSIGIDLVPRPPLV-------IKGDFHAQPFD--------NGTFDFEFSN 174 (258)
Q Consensus 115 ~~-~~VLDIGcGtG~---~~~~L~-~~g~~~v~GvD~s~~~~~~-------~~aDa~~LPf~--------d~SFD~V~s~ 174 (258)
++ .+|| |-.|+|. .+..++ ..|. +|+++|.++..... ...|...-.+. ...+|+|+.+
T Consensus 163 ~g~~~vl-i~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~ 240 (349)
T 3pi7_A 163 EGEKAFV-MTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDA 240 (349)
T ss_dssp HCCSEEE-ESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEES
T ss_pred CCCCEEE-EeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEEC
Confidence 44 4555 5334444 444444 3576 89999976432110 11122211111 1369999875
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+= ...+.+..+.|+|||+++..
T Consensus 241 ~g------~~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 241 VT------GPLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp SC------HHHHHHHHHHSCTTCEEEEC
T ss_pred CC------ChhHHHHHhhhcCCCEEEEE
Confidence 21 12347788999999998875
No 413
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=38.13 E-value=60 Score=26.48 Aligned_cols=70 Identities=13% Similarity=0.038 Sum_probs=38.9
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCCCCCeeEEEeccccccCChHHHHHHHHhc
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFDNGTFDFEFSNVFDHALYPWKFVGEIERT 192 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~d~SFD~V~s~~l~h~~~p~~~l~Ei~RV 192 (258)
...+|.=||+|. |. ++..|++.|. +|+.+|.++. .-...|+|+..+-. ..-..+++++...
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~~~~--------------~~~~aD~vi~av~~--~~~~~v~~~l~~~ 80 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGSKDQ--------------ATTLGEIVIMAVPY--PALAALAKQYATQ 80 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC-EEEEECTTCC--------------CSSCCSEEEECSCH--HHHHHHHHHTHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHH--------------HhccCCEEEEcCCc--HHHHHHHHHHHHh
Confidence 456899999874 22 3445666675 7999887533 12346888874211 1113445566556
Q ss_pred ccCCcEEEEEe
Q 025071 193 LKPAGVCVLHV 203 (258)
Q Consensus 193 LKPGG~lii~v 203 (258)
++ |.+++.+
T Consensus 81 ~~--~~~vi~~ 89 (209)
T 2raf_A 81 LK--GKIVVDI 89 (209)
T ss_dssp HT--TSEEEEC
T ss_pred cC--CCEEEEE
Confidence 66 4444443
No 414
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=37.07 E-value=35 Score=29.58 Aligned_cols=73 Identities=12% Similarity=-0.018 Sum_probs=42.9
Q ss_pred CEEEEEC-CCC--CHHHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCCCCCeeEEEeccccccCChHHHHHHHHhcc
Q 025071 117 SKALSIG-ARV--GQEVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFDNGTFDFEFSNVFDHALYPWKFVGEIERTL 193 (258)
Q Consensus 117 ~~VLDIG-cGt--G~~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~d~SFD~V~s~~l~h~~~p~~~l~Ei~RVL 193 (258)
.+|.=|| +|. +.++..|++.|. +|+++|.++.. +..+ .-...|+|+.++=.. .-..+++++...+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~~~~------~~~~---~~~~aDvVilavp~~--~~~~vl~~l~~~l 89 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWA------VAES---ILANADVVIVSVPIN--LTLETIERLKPYL 89 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGG------GHHH---HHTTCSEEEECSCGG--GHHHHHHHHGGGC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECCccc------CHHH---HhcCCCEEEEeCCHH--HHHHHHHHHHhhc
Confidence 4799998 874 234455666775 79999875421 1000 013468888753111 1345677888888
Q ss_pred cCCcEEEE
Q 025071 194 KPAGVCVL 201 (258)
Q Consensus 194 KPGG~lii 201 (258)
+||..++.
T Consensus 90 ~~~~iv~~ 97 (298)
T 2pv7_A 90 TENMLLAD 97 (298)
T ss_dssp CTTSEEEE
T ss_pred CCCcEEEE
Confidence 88764443
No 415
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=36.75 E-value=33 Score=30.25 Aligned_cols=80 Identities=11% Similarity=-0.090 Sum_probs=45.5
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCCCCCeeEEEec-----cccccCChHHHHH
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFDNGTFDFEFSN-----VFDHALYPWKFVG 187 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~d~SFD~V~s~-----~l~h~~~p~~~l~ 187 (258)
.+.+|.=||+|. |. .+..+...|. +|++.|.++....... ...++.---...|+|+.. ...|+.+ +
T Consensus 121 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~-~~~~l~ell~~aDiV~l~~P~t~~t~~li~-----~ 193 (290)
T 3gvx_A 121 YGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRSSVDQNVDV-ISESPADLFRQSDFVLIAIPLTDKTRGMVN-----S 193 (290)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSCCCTTCSE-ECSSHHHHHHHCSEEEECCCCCTTTTTCBS-----H
T ss_pred ecchheeeccCchhHHHHHHHHhhCc-EEEEEecccccccccc-ccCChHHHhhccCeEEEEeeccccchhhhh-----H
Confidence 467899999984 33 3445556786 7999998654322111 001111001346888774 1233332 5
Q ss_pred HHHhcccCCcEEEE
Q 025071 188 EIERTLKPAGVCVL 201 (258)
Q Consensus 188 Ei~RVLKPGG~lii 201 (258)
+....+|||.+++=
T Consensus 194 ~~l~~mk~gailIN 207 (290)
T 3gvx_A 194 RLLANARKNLTIVN 207 (290)
T ss_dssp HHHTTCCTTCEEEE
T ss_pred HHHhhhhcCceEEE
Confidence 67788999887654
No 416
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=36.30 E-value=99 Score=24.88 Aligned_cols=58 Identities=14% Similarity=0.161 Sum_probs=36.2
Q ss_pred CCCEEEEECCCCCHHHH----HHHhcCCCcEEEEeCCCC--------CC-ceeeecCC-CCCCCCCCeeEEEec
Q 025071 115 NESKALSIGARVGQEVA----ALKLVGVSDSIGIDLVPR--------PP-LVIKGDFH-AQPFDNGTFDFEFSN 174 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~----~L~~~g~~~v~GvD~s~~--------~~-~~~~aDa~-~LPf~d~SFD~V~s~ 174 (258)
.+.+||=.|+ +|..+. .|.+.|. +|++++.++. .. .++.+|.. .+.-.-+..|+|+.+
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ 91 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFA 91 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEEC
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEEC
Confidence 4678999985 455443 4455675 7999997642 23 56777764 222112468999985
No 417
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=35.75 E-value=12 Score=35.39 Aligned_cols=80 Identities=10% Similarity=0.074 Sum_probs=48.8
Q ss_pred CEEEEECCCC--CHHHHHHHhcCCCcEEEEeCCCCCCc------------------------------e-eeecCCCCCC
Q 025071 117 SKALSIGARV--GQEVAALKLVGVSDSIGIDLVPRPPL------------------------------V-IKGDFHAQPF 163 (258)
Q Consensus 117 ~~VLDIGcGt--G~~~~~L~~~g~~~v~GvD~s~~~~~------------------------------~-~~aDa~~LPf 163 (258)
.+|-=||+|+ +.++..+++.|. +|+..|.++.... + ...|.+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~---- 80 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGH-QVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH---- 80 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG----
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH----
Confidence 3677788885 234556677786 7999998642100 0 011111
Q ss_pred CCCCeeEEEeccccccCChHHHHHHHHhcccCCcEEEE
Q 025071 164 DNGTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVL 201 (258)
Q Consensus 164 ~d~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii 201 (258)
.-...|+|+.++.+...-...+++|+..+++||.+++.
T Consensus 81 ~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~Ilas 118 (483)
T 3mog_A 81 ALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTT 118 (483)
T ss_dssp GGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred HhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEe
Confidence 11346899886554432235678999999999887654
No 418
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=35.27 E-value=36 Score=30.79 Aligned_cols=84 Identities=12% Similarity=-0.016 Sum_probs=46.1
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCc------e-eeecCCCCCCCCCCeeEEEeccccccCChHHH
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPL------V-IKGDFHAQPFDNGTFDFEFSNVFDHALYPWKF 185 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~------~-~~aDa~~LPf~d~SFD~V~s~~l~h~~~p~~~ 185 (258)
...+|-=||+|. |. .+..|.+.|. +|++.|.++.... . ...+..++--..+..|+|+..+-.. .-..+
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~--~v~~v 97 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA--VVDSM 97 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG--GHHHH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH--HHHHH
Confidence 456899999873 22 3455667785 7999997642110 0 0001100000012349998853222 34566
Q ss_pred HHHHHhcccCCcEEEE
Q 025071 186 VGEIERTLKPAGVCVL 201 (258)
Q Consensus 186 l~Ei~RVLKPGG~lii 201 (258)
++++...|+||..++-
T Consensus 98 l~~l~~~l~~g~iiId 113 (358)
T 4e21_A 98 LQRMTPLLAANDIVID 113 (358)
T ss_dssp HHHHGGGCCTTCEEEE
T ss_pred HHHHHhhCCCCCEEEe
Confidence 7888888888765544
No 419
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=34.97 E-value=34 Score=32.61 Aligned_cols=81 Identities=17% Similarity=0.087 Sum_probs=46.7
Q ss_pred CCCCCEEEEECCCC-CHH-HHHHHhcCCCcEEEEeCCCCCCc------eeeecCCCCCCCCCCeeEEEec-cccccCChH
Q 025071 113 LFNESKALSIGARV-GQE-VAALKLVGVSDSIGIDLVPRPPL------VIKGDFHAQPFDNGTFDFEFSN-VFDHALYPW 183 (258)
Q Consensus 113 l~~~~~VLDIGcGt-G~~-~~~L~~~g~~~v~GvD~s~~~~~------~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~p~ 183 (258)
...+.+|+=+|+|. |.. +..++..|. +|+++|.++.... +...+.+++ -...|+|+.. .-.++.+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~~~~l~e~---l~~aDvVi~atgt~~~i~-- 344 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFDVVTVEEA---IGDADIVVTATGNKDIIM-- 344 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEECCHHHH---GGGCSEEEECSSSSCSBC--
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCEEecHHHH---HhCCCEEEECCCCHHHHH--
Confidence 56789999999863 222 233445675 8999998643210 111111111 1357999874 2223222
Q ss_pred HHHHHHHhcccCCcEEEEE
Q 025071 184 KFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 184 ~~l~Ei~RVLKPGG~lii~ 202 (258)
.+..+.+||||+++..
T Consensus 345 ---~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 345 ---LEHIKAMKDHAILGNI 360 (494)
T ss_dssp ---HHHHHHSCTTCEEEEC
T ss_pred ---HHHHHhcCCCcEEEEe
Confidence 3667789999988664
No 420
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=34.33 E-value=1.2e+02 Score=24.90 Aligned_cols=90 Identities=13% Similarity=0.047 Sum_probs=52.0
Q ss_pred CCCEEEEECCC--CCH---HHHHHHhcCCCcEEEEeCCCC---------------CCceeeecCCCCCC-----C-----
Q 025071 115 NESKALSIGAR--VGQ---EVAALKLVGVSDSIGIDLVPR---------------PPLVIKGDFHAQPF-----D----- 164 (258)
Q Consensus 115 ~~~~VLDIGcG--tG~---~~~~L~~~g~~~v~GvD~s~~---------------~~~~~~aDa~~LPf-----~----- 164 (258)
.+.++|=.|++ .|. .+..|++.|. +|+.++.+.. ...++.+|..+..- +
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 46789999976 333 3556677786 7888876431 12345566543220 0
Q ss_pred CCCeeEEEec-cccc-------c--CChH--------------HHHHHHHhcccCCcEEEEEecc
Q 025071 165 NGTFDFEFSN-VFDH-------A--LYPW--------------KFVGEIERTLKPAGVCVLHVAL 205 (258)
Q Consensus 165 d~SFD~V~s~-~l~h-------~--~~p~--------------~~l~Ei~RVLKPGG~lii~v~~ 205 (258)
-+..|+++.+ .+.+ . .+++ ...+.+...++++|.++...+.
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 149 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL 149 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence 1368988875 2221 1 1121 2345667778888988777553
No 421
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=34.15 E-value=23 Score=31.91 Aligned_cols=81 Identities=17% Similarity=0.148 Sum_probs=43.3
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCC--CCCeeEEEec-----cccccCChHHH
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFD--NGTFDFEFSN-----VFDHALYPWKF 185 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~--d~SFD~V~s~-----~l~h~~~p~~~ 185 (258)
.+.+|.=||+|. |. .+..++..|. +|++.|.++.........+....++ -...|+|+.. ...|+.+
T Consensus 164 ~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~---- 238 (335)
T 2g76_A 164 NGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLN---- 238 (335)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCHHHHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBC----
T ss_pred CcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcchhhhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhC----
Confidence 567899998872 22 2334445675 7999997643210000000000111 1356888874 1233333
Q ss_pred HHHHHhcccCCcEEEE
Q 025071 186 VGEIERTLKPAGVCVL 201 (258)
Q Consensus 186 l~Ei~RVLKPGG~lii 201 (258)
++....+|||++++=
T Consensus 239 -~~~l~~mk~gailIN 253 (335)
T 2g76_A 239 -DNTFAQCKKGVRVVN 253 (335)
T ss_dssp -HHHHTTSCTTEEEEE
T ss_pred -HHHHhhCCCCcEEEE
Confidence 466778999876654
No 422
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=33.90 E-value=65 Score=26.88 Aligned_cols=82 Identities=22% Similarity=0.127 Sum_probs=45.6
Q ss_pred EEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCceeee-c--CC--------CCCCCCCCeeEEEeccccccCChHH
Q 025071 118 KALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPLVIKG-D--FH--------AQPFDNGTFDFEFSNVFDHALYPWK 184 (258)
Q Consensus 118 ~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~~~~a-D--a~--------~LPf~d~SFD~V~s~~l~h~~~p~~ 184 (258)
+|.=||+|. |. .+..|++.|. +|+.+|.++....-... . .. ..+-.-...|+|+..+=.+ .-..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~--~~~~ 78 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW--QVSD 78 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG--GHHH
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHH--hHHH
Confidence 578889873 22 3445666775 79999976543211111 0 00 0010012579888753222 1356
Q ss_pred HHHHHHhcccCCcEEEEE
Q 025071 185 FVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 185 ~l~Ei~RVLKPGG~lii~ 202 (258)
+++++...++||..++..
T Consensus 79 v~~~l~~~l~~~~~vv~~ 96 (291)
T 1ks9_A 79 AVKSLASTLPVTTPILLI 96 (291)
T ss_dssp HHHHHHTTSCTTSCEEEE
T ss_pred HHHHHHhhCCCCCEEEEe
Confidence 678888888888765554
No 423
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=33.28 E-value=35 Score=29.51 Aligned_cols=83 Identities=5% Similarity=-0.037 Sum_probs=44.8
Q ss_pred CCCCEEEEECCCC-CHH-HHHHHhcCCCcEEEEeCCCCCCc------eeeecCCCCCCCCCCeeEEEeccccccCChHHH
Q 025071 114 FNESKALSIGARV-GQE-VAALKLVGVSDSIGIDLVPRPPL------VIKGDFHAQPFDNGTFDFEFSNVFDHALYPWKF 185 (258)
Q Consensus 114 ~~~~~VLDIGcGt-G~~-~~~L~~~g~~~v~GvD~s~~~~~------~~~aDa~~LPf~d~SFD~V~s~~l~h~~~p~~~ 185 (258)
..+.+|+=||+|. |.. +..+...|. +|++.|.++.... ....+..++.-.-...|+|+..+-.|+.+.
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~--- 228 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPALVVTA--- 228 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSSCCBCH---
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCChHHhCH---
Confidence 3678999999873 222 233445676 8999997642110 011111111100146799988532343332
Q ss_pred HHHHHhcccCCcEEEEE
Q 025071 186 VGEIERTLKPAGVCVLH 202 (258)
Q Consensus 186 l~Ei~RVLKPGG~lii~ 202 (258)
+....+|||+.++-.
T Consensus 229 --~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 229 --NVLAEMPSHTFVIDL 243 (293)
T ss_dssp --HHHHHSCTTCEEEEC
T ss_pred --HHHHhcCCCCEEEEe
Confidence 344568999876553
No 424
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=33.24 E-value=58 Score=28.05 Aligned_cols=79 Identities=15% Similarity=0.042 Sum_probs=45.2
Q ss_pred CEEEEECCCCCH--HHHHHHhcCCCcEEEEeCCCCCCce-------eeecCCCCCCCCCCeeEEEeccccccCChHHHHH
Q 025071 117 SKALSIGARVGQ--EVAALKLVGVSDSIGIDLVPRPPLV-------IKGDFHAQPFDNGTFDFEFSNVFDHALYPWKFVG 187 (258)
Q Consensus 117 ~~VLDIGcGtG~--~~~~L~~~g~~~v~GvD~s~~~~~~-------~~aDa~~LPf~d~SFD~V~s~~l~h~~~p~~~l~ 187 (258)
.+|--||+|.=. .+..|++.|. +|++.|.++....- ...+..++ -+ .|+|+..+- .-..-..+++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~~---~~-aDvvi~~vp-~~~~~~~v~~ 89 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEAGATLADSVADV---AA-ADLIHITVL-DDAQVREVVG 89 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHTTCEECSSHHHH---TT-SSEEEECCS-SHHHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCEEcCCHHHH---Hh-CCEEEEECC-ChHHHHHHHH
Confidence 579999998522 3455666775 79999987654311 11111111 12 688887421 1001234567
Q ss_pred HHHhcccCCcEEEE
Q 025071 188 EIERTLKPAGVCVL 201 (258)
Q Consensus 188 Ei~RVLKPGG~lii 201 (258)
++...++||..++-
T Consensus 90 ~l~~~l~~g~ivv~ 103 (296)
T 3qha_A 90 ELAGHAKPGTVIAI 103 (296)
T ss_dssp HHHTTCCTTCEEEE
T ss_pred HHHHhcCCCCEEEE
Confidence 88888888766544
No 425
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=32.98 E-value=38 Score=29.44 Aligned_cols=72 Identities=8% Similarity=-0.074 Sum_probs=40.7
Q ss_pred CEEEEECCCC----C--HHHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCC---CCCeeEEEeccccc-cCChHHHH
Q 025071 117 SKALSIGARV----G--QEVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFD---NGTFDFEFSNVFDH-ALYPWKFV 186 (258)
Q Consensus 117 ~~VLDIGcGt----G--~~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~---d~SFD~V~s~~l~h-~~~p~~~l 186 (258)
.+||=|| |. | .+..+|++.|+ +|.-++.. .+|.. -+.||+|+...... ... ...+
T Consensus 5 ~~vLiV~-g~~~~~~a~~l~~aL~~~g~-~V~~i~~~------------~~~~~~~~L~~yDvIIl~d~~~~~l~-~~~~ 69 (259)
T 3rht_A 5 TRVLYCG-DTSLETAAGYLAGLMTSWQW-EFDYIPSH------------VGLDVGELLAKQDLVILSDYPAERMT-AQAI 69 (259)
T ss_dssp -CEEEEE-SSCTTTTHHHHHHHHHHTTC-CCEEECTT------------SCBCSSHHHHTCSEEEEESCCGGGBC-HHHH
T ss_pred ceEEEEC-CCCchhHHHHHHHHHHhCCc-eEEEeccc------------ccccChhHHhcCCEEEEcCCccccCC-HHHH
Confidence 3678776 33 2 23446666776 46555532 22221 15899998742221 223 3455
Q ss_pred HHHHhcccCCcEEEEEe
Q 025071 187 GEIERTLKPAGVCVLHV 203 (258)
Q Consensus 187 ~Ei~RVLKPGG~lii~v 203 (258)
+.+.+..+.||-+++.-
T Consensus 70 ~~L~~yV~~GGgLi~~g 86 (259)
T 3rht_A 70 DQLVTMVKAGCGLVMLG 86 (259)
T ss_dssp HHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHhCCeEEEec
Confidence 67777778898887763
No 426
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=32.51 E-value=30 Score=29.50 Aligned_cols=81 Identities=12% Similarity=0.052 Sum_probs=42.9
Q ss_pred CEEEEECC-CC-CH-HHHHHHhcCCCcEEEEeCCCCCCc-ee-e-ecCCCCCCCCCCeeEEEeccccccCChHHHHHHHH
Q 025071 117 SKALSIGA-RV-GQ-EVAALKLVGVSDSIGIDLVPRPPL-VI-K-GDFHAQPFDNGTFDFEFSNVFDHALYPWKFVGEIE 190 (258)
Q Consensus 117 ~~VLDIGc-Gt-G~-~~~~L~~~g~~~v~GvD~s~~~~~-~~-~-aDa~~LPf~d~SFD~V~s~~l~h~~~p~~~l~Ei~ 190 (258)
.+|.=||| |. |. .+..|.+.|. +|+++|.++.... +. . .+..+..-.-+..|+|+..+-... -..+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~--~~~v~~~l~ 88 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNI--IEKVAEDIV 88 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHH--HHHHHHHHG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchH--HHHHHHHHH
Confidence 47999999 74 32 3455666775 7999997532110 00 0 011111111135799987532111 234567777
Q ss_pred hcccCCcEEE
Q 025071 191 RTLKPAGVCV 200 (258)
Q Consensus 191 RVLKPGG~li 200 (258)
..++||..++
T Consensus 89 ~~l~~~~ivv 98 (286)
T 3c24_A 89 PRVRPGTIVL 98 (286)
T ss_dssp GGSCTTCEEE
T ss_pred HhCCCCCEEE
Confidence 7777766444
No 427
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=32.11 E-value=2.7 Score=38.45 Aligned_cols=87 Identities=17% Similarity=0.135 Sum_probs=45.4
Q ss_pred CCCEEEEECCCC-CHH-HHHHHhcCCCcEEEEeCCCCCC---------ceeeecCCCCCCCC--CCeeEEEecc-ccccC
Q 025071 115 NESKALSIGARV-GQE-VAALKLVGVSDSIGIDLVPRPP---------LVIKGDFHAQPFDN--GTFDFEFSNV-FDHAL 180 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~~-~~~L~~~g~~~v~GvD~s~~~~---------~~~~aDa~~LPf~d--~SFD~V~s~~-l~h~~ 180 (258)
++.+|+=+|+|. |.. +..++..|. +|+++|.++... .+.......-.+.+ ...|+|+.++ .....
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~ 245 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAK 245 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCC
Confidence 468999999853 222 223345676 899999764211 00000000000100 2579998742 11111
Q ss_pred ChHHHHHHHHhcccCCcEEEEE
Q 025071 181 YPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 181 ~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
.+..+.+++.+.+||||+++-.
T Consensus 246 t~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 246 APKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp CCCCBCHHHHTTSCTTCEEEEG
T ss_pred CcceecHHHHhcCCCCcEEEEE
Confidence 1222236778889999987664
No 428
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=32.00 E-value=55 Score=28.76 Aligned_cols=81 Identities=14% Similarity=0.132 Sum_probs=47.1
Q ss_pred CEEEEECCCC--CHHHHHHHhcCCC-cEEEEeCCCCCCc------e---eeecCCCCCCCCCCeeEEEeccccccCChHH
Q 025071 117 SKALSIGARV--GQEVAALKLVGVS-DSIGIDLVPRPPL------V---IKGDFHAQPFDNGTFDFEFSNVFDHALYPWK 184 (258)
Q Consensus 117 ~~VLDIGcGt--G~~~~~L~~~g~~-~v~GvD~s~~~~~------~---~~aDa~~LPf~d~SFD~V~s~~l~h~~~p~~ 184 (258)
.+|.=||+|. |.++..|.+.|.. +|++.|.++.... + ...|..++ .-...|+|+.++-.. .-..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~--~~~~aDvVilavp~~--~~~~ 109 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKV--EDFSPDFVMLSSPVR--TFRE 109 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGG--GGGCCSEEEECSCGG--GHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHH--hhccCCEEEEeCCHH--HHHH
Confidence 6899999873 2345566677753 7999998642110 0 11122110 123579998753211 1245
Q ss_pred HHHHHHhcccCCcEEEE
Q 025071 185 FVGEIERTLKPAGVCVL 201 (258)
Q Consensus 185 ~l~Ei~RVLKPGG~lii 201 (258)
+++++...|+||..++-
T Consensus 110 vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 110 IAKKLSYILSEDATVTD 126 (314)
T ss_dssp HHHHHHHHSCTTCEEEE
T ss_pred HHHHHhhccCCCcEEEE
Confidence 67889888998876543
No 429
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=31.76 E-value=1.1e+02 Score=25.59 Aligned_cols=76 Identities=16% Similarity=0.111 Sum_probs=42.2
Q ss_pred EEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCc------e---eeecCCCCCCCCCCeeEEEeccccccCChHHHH
Q 025071 118 KALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPL------V---IKGDFHAQPFDNGTFDFEFSNVFDHALYPWKFV 186 (258)
Q Consensus 118 ~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~------~---~~aDa~~LPf~d~SFD~V~s~~l~h~~~p~~~l 186 (258)
+|.=||||. |. .+..|.+.|. +|+++|.++.... . ...|..++ ...|+|+..+-.. .-..++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~D~vi~av~~~--~~~~~~ 74 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQDLSLL----QTAKIIFLCTPIQ--LILPTL 74 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESCGGGG----TTCSEEEECSCHH--HHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccCCHHHh----CCCCEEEEECCHH--HHHHHH
Confidence 577888874 22 3445566675 7999987532110 0 11122222 4579998853111 123456
Q ss_pred HHHHhcccCCcEEE
Q 025071 187 GEIERTLKPAGVCV 200 (258)
Q Consensus 187 ~Ei~RVLKPGG~li 200 (258)
+++...++||..++
T Consensus 75 ~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 75 EKLIPHLSPTAIVT 88 (279)
T ss_dssp HHHGGGSCTTCEEE
T ss_pred HHHHhhCCCCCEEE
Confidence 77777888877553
No 430
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=30.85 E-value=86 Score=27.50 Aligned_cols=80 Identities=11% Similarity=-0.045 Sum_probs=43.7
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCCCCCeeEEEec-----cccccCChHHHHH
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFDNGTFDFEFSN-----VFDHALYPWKFVG 187 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~d~SFD~V~s~-----~l~h~~~p~~~l~ 187 (258)
.+.+|.=||+|. |. .+..+...|. +|++.|.++...... ...++.---...|+|+.. ...|+.+ +
T Consensus 123 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~dr~~~~~~~~--~~~~l~ell~~aDvV~l~~P~~~~t~~~i~-----~ 194 (303)
T 1qp8_A 123 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKEGPWR--FTNSLEEALREARAAVCALPLNKHTRGLVK-----Y 194 (303)
T ss_dssp TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCCSSSC--CBSCSHHHHTTCSEEEECCCCSTTTTTCBC-----H
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCccccCcc--cCCCHHHHHhhCCEEEEeCcCchHHHHHhC-----H
Confidence 467899998874 22 2344455675 799999765311000 001111001356988874 1334433 3
Q ss_pred HHHhcccCCcEEEEE
Q 025071 188 EIERTLKPAGVCVLH 202 (258)
Q Consensus 188 Ei~RVLKPGG~lii~ 202 (258)
+....+|||.+++=+
T Consensus 195 ~~l~~mk~gailin~ 209 (303)
T 1qp8_A 195 QHLALMAEDAVFVNV 209 (303)
T ss_dssp HHHTTSCTTCEEEEC
T ss_pred HHHhhCCCCCEEEEC
Confidence 566788998766543
No 431
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=30.35 E-value=12 Score=33.66 Aligned_cols=86 Identities=15% Similarity=0.091 Sum_probs=45.9
Q ss_pred CCEEEEECCCC-CHHH-HHHHhcCCCcEEEEeCCCCCC---------ceeeecCCCCCCCC--CCeeEEEecc-ccccCC
Q 025071 116 ESKALSIGARV-GQEV-AALKLVGVSDSIGIDLVPRPP---------LVIKGDFHAQPFDN--GTFDFEFSNV-FDHALY 181 (258)
Q Consensus 116 ~~~VLDIGcGt-G~~~-~~L~~~g~~~v~GvD~s~~~~---------~~~~aDa~~LPf~d--~SFD~V~s~~-l~h~~~ 181 (258)
+.+||=+|+|. |..+ ..++..|. +|+++|.++... .+...+...-.+.+ ..+|+|+.++ ......
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~ 245 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRA 245 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCC
Confidence 47999999963 2222 33445686 899999864211 00000000000111 2589999852 222112
Q ss_pred hHHHHHHHHhcccCCcEEEEE
Q 025071 182 PWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 182 p~~~l~Ei~RVLKPGG~lii~ 202 (258)
|....++..+.+||||+++..
T Consensus 246 ~~li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 246 PILVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp CCCBCHHHHTTSCTTCEEEET
T ss_pred CeecCHHHHhhCCCCCEEEEE
Confidence 221235677889999988765
No 432
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=30.28 E-value=20 Score=31.03 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=22.7
Q ss_pred CEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCC
Q 025071 117 SKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVP 148 (258)
Q Consensus 117 ~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~ 148 (258)
.+|.-||+|. |. ++..|++.|. +|+.+|.++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH
Confidence 5799999985 32 4556667786 799999863
No 433
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=30.25 E-value=1.4e+02 Score=22.47 Aligned_cols=84 Identities=17% Similarity=0.096 Sum_probs=48.6
Q ss_pred CCEEEEECCCCCHHHH----HHHhcCCCcEEEEeCCCC------------CCceeeecCCCCCC----CCCCeeEEEecc
Q 025071 116 ESKALSIGARVGQEVA----ALKLVGVSDSIGIDLVPR------------PPLVIKGDFHAQPF----DNGTFDFEFSNV 175 (258)
Q Consensus 116 ~~~VLDIGcGtG~~~~----~L~~~g~~~v~GvD~s~~------------~~~~~~aDa~~LPf----~d~SFD~V~s~~ 175 (258)
..+|+=+|| |..+. .|.+.|. +|+.+|.++. ...++.+|+.+... .-+..|+|++..
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence 346888886 45544 4445675 7999998531 13456677643211 124678888742
Q ss_pred ccccCChHHHHHHHHhcccCCcEEEEEec
Q 025071 176 FDHALYPWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 176 l~h~~~p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
=+. .....+.+..|-+.|...++..+.
T Consensus 80 ~~d--~~n~~~~~~a~~~~~~~~ii~~~~ 106 (153)
T 1id1_A 80 DND--ADNAFVVLSAKDMSSDVKTVLAVS 106 (153)
T ss_dssp SCH--HHHHHHHHHHHHHTSSSCEEEECS
T ss_pred CCh--HHHHHHHHHHHHHCCCCEEEEEEC
Confidence 111 122345677777878777777543
No 434
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=30.25 E-value=22 Score=31.67 Aligned_cols=22 Identities=23% Similarity=0.344 Sum_probs=18.4
Q ss_pred hHHHHHHHHhcccCCcEEEEEe
Q 025071 182 PWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 182 p~~~l~Ei~RVLKPGG~lii~v 203 (258)
-+.++..+.++|+|||+++++.
T Consensus 212 L~~~L~~a~~~L~~gGrl~vis 233 (285)
T 1wg8_A 212 LKEFLEQAAEVLAPGGRLVVIA 233 (285)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEEe
Confidence 3567889999999999998864
No 435
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=30.10 E-value=22 Score=40.55 Aligned_cols=87 Identities=15% Similarity=0.067 Sum_probs=52.4
Q ss_pred HhcCCCCCCEEEEECC--CCCHHHHHHHh-cCCCcEEEEeCCCCCCce-----------eeecCCCCCC--------CCC
Q 025071 109 QRHFLFNESKALSIGA--RVGQEVAALKL-VGVSDSIGIDLVPRPPLV-----------IKGDFHAQPF--------DNG 166 (258)
Q Consensus 109 ~~~~l~~~~~VLDIGc--GtG~~~~~L~~-~g~~~v~GvD~s~~~~~~-----------~~aDa~~LPf--------~d~ 166 (258)
....+.+|.+||=.|+ |.|..+..+++ .|. +|++++.++..... ...|.....| ...
T Consensus 1661 ~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~ 1739 (2512)
T 2vz8_A 1661 VRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGK 1739 (2512)
T ss_dssp TTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSC
T ss_pred HHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCC
Confidence 3345778999999874 34555666665 565 78888864311000 0011111111 123
Q ss_pred CeeEEEeccccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 167 TFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 167 SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
.+|+|+... . ...+.+..++|+|||+++..
T Consensus 1740 GvDvVld~~-----g-~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1740 GVDLVLNSL-----A-EEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp CEEEEEECC-----C-HHHHHHHHTTEEEEEEEEEC
T ss_pred CceEEEECC-----C-chHHHHHHHhcCCCcEEEEe
Confidence 589998742 1 35578999999999998775
No 436
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=29.94 E-value=24 Score=31.46 Aligned_cols=84 Identities=13% Similarity=0.047 Sum_probs=47.5
Q ss_pred CEEEEECCCC--CHHHHHHHhcCCCcEEEEeCCCCCCc-----------------eeee-----------c-CCCCCCCC
Q 025071 117 SKALSIGARV--GQEVAALKLVGVSDSIGIDLVPRPPL-----------------VIKG-----------D-FHAQPFDN 165 (258)
Q Consensus 117 ~~VLDIGcGt--G~~~~~L~~~g~~~v~GvD~s~~~~~-----------------~~~a-----------D-a~~LPf~d 165 (258)
.+|--||+|+ +.++..+++.|+ +|++.|.++.... +..+ . ..++.-.-
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 4788899885 234556677786 7999998642110 0000 0 00110011
Q ss_pred CCeeEEEeccccccCChHHHHHHHHhcccCCcEEEE
Q 025071 166 GTFDFEFSNVFDHALYPWKFVGEIERTLKPAGVCVL 201 (258)
Q Consensus 166 ~SFD~V~s~~l~h~~~p~~~l~Ei~RVLKPGG~lii 201 (258)
...|+|+.++-+...--..+++++...++||-.++-
T Consensus 86 ~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s 121 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSS 121 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEE
Confidence 356888876433222224567899999999876653
No 437
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=29.70 E-value=13 Score=32.86 Aligned_cols=82 Identities=13% Similarity=0.062 Sum_probs=43.0
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCCC--CCeeEEEecc-----ccccCChHHH
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFDN--GTFDFEFSNV-----FDHALYPWKF 185 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~d--~SFD~V~s~~-----l~h~~~p~~~ 185 (258)
.+.+|.=||+|. |. .+..+...|. +|++.|.++.........+....+++ ...|+|+... ..|+.+
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~---- 215 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLIN---- 215 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBC----
T ss_pred CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCChhhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcC----
Confidence 467899998863 22 2334445675 79999986532100000000001111 2468887741 233332
Q ss_pred HHHHHhcccCCcEEEEE
Q 025071 186 VGEIERTLKPAGVCVLH 202 (258)
Q Consensus 186 l~Ei~RVLKPGG~lii~ 202 (258)
++....+|||++++-.
T Consensus 216 -~~~l~~mk~ga~lin~ 231 (307)
T 1wwk_A 216 -EERLKLMKKTAILINT 231 (307)
T ss_dssp -HHHHHHSCTTCEEEEC
T ss_pred -HHHHhcCCCCeEEEEC
Confidence 3566778998876553
No 438
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=29.04 E-value=42 Score=29.07 Aligned_cols=83 Identities=8% Similarity=0.030 Sum_probs=45.2
Q ss_pred CCCCEEEEECCCC-CHH-HHHHHhcCCCcEEEEeCCCCCCc------eeeecCCCCCCCCCCeeEEEeccccccCChHHH
Q 025071 114 FNESKALSIGARV-GQE-VAALKLVGVSDSIGIDLVPRPPL------VIKGDFHAQPFDNGTFDFEFSNVFDHALYPWKF 185 (258)
Q Consensus 114 ~~~~~VLDIGcGt-G~~-~~~L~~~g~~~v~GvD~s~~~~~------~~~aDa~~LPf~d~SFD~V~s~~l~h~~~p~~~ 185 (258)
-.+.+|+=||+|. |.. +..+...|. +|++.|.++.... ....+..++.-.-...|+|+..+-.|+.+
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~---- 229 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPSMILN---- 229 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSSCCBC----
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCChhhhC----
Confidence 3578999999873 222 233445675 8999997532110 01101111110114679999853234433
Q ss_pred HHHHHhcccCCcEEEEE
Q 025071 186 VGEIERTLKPAGVCVLH 202 (258)
Q Consensus 186 l~Ei~RVLKPGG~lii~ 202 (258)
++....+|||++++=.
T Consensus 230 -~~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 230 -QTVLSSMTPKTLILDL 245 (300)
T ss_dssp -HHHHTTSCTTCEEEEC
T ss_pred -HHHHHhCCCCCEEEEE
Confidence 2455778998876543
No 439
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=28.75 E-value=44 Score=29.74 Aligned_cols=81 Identities=12% Similarity=-0.075 Sum_probs=43.3
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCc-eee-ecCCCCCCCCCCeeEEEec-----cccccCChHHH
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPL-VIK-GDFHAQPFDNGTFDFEFSN-----VFDHALYPWKF 185 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~-~~~-aDa~~LPf~d~SFD~V~s~-----~l~h~~~p~~~ 185 (258)
.+.+|.=||+|. |. .+..++..|. +|++.|.++.... +.. ....++.---...|+|+.. .-.|+.+
T Consensus 138 ~g~tvGIiG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~---- 212 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKVAESLQAWGF-PLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIIN---- 212 (315)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTC-CEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBS----
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhcc----
Confidence 467899999883 33 2344555676 7999998654321 111 0001111001245888774 1233332
Q ss_pred HHHHHhcccCCcEEEE
Q 025071 186 VGEIERTLKPAGVCVL 201 (258)
Q Consensus 186 l~Ei~RVLKPGG~lii 201 (258)
++....+|||.+++=
T Consensus 213 -~~~l~~mk~gailIN 227 (315)
T 3pp8_A 213 -SELLDQLPDGAYVLN 227 (315)
T ss_dssp -HHHHTTSCTTEEEEE
T ss_pred -HHHHhhCCCCCEEEE
Confidence 466778899765543
No 440
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=28.60 E-value=51 Score=31.51 Aligned_cols=78 Identities=14% Similarity=0.035 Sum_probs=45.3
Q ss_pred CCCCEEEEECCCCCH---HHHHHHhcCCCcEEEEeCCCCCC------ceeeecCCCCCCCCCCeeEEEec-cccccCChH
Q 025071 114 FNESKALSIGARVGQ---EVAALKLVGVSDSIGIDLVPRPP------LVIKGDFHAQPFDNGTFDFEFSN-VFDHALYPW 183 (258)
Q Consensus 114 ~~~~~VLDIGcGtG~---~~~~L~~~g~~~v~GvD~s~~~~------~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~p~ 183 (258)
-.+.+|+=+|+| |- .+..|+..|. +|+.+|.++... .+...+.++ .-..+|+|+.. .-.++..
T Consensus 263 L~GKtVvVtGaG-gIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~dv~~lee---~~~~aDvVi~atG~~~vl~-- 335 (488)
T 3ond_A 263 IAGKVAVVAGYG-DVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQVLTLED---VVSEADIFVTTTGNKDIIM-- 335 (488)
T ss_dssp CTTCEEEEECCS-HHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEECCGGG---TTTTCSEEEECSSCSCSBC--
T ss_pred ccCCEEEEECCC-HHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCccCCHHH---HHHhcCEEEeCCCChhhhh--
Confidence 468899999998 32 2345566786 899999864211 011112211 22468988763 2222222
Q ss_pred HHHHHHHhcccCCcEEEE
Q 025071 184 KFVGEIERTLKPAGVCVL 201 (258)
Q Consensus 184 ~~l~Ei~RVLKPGG~lii 201 (258)
.|..+.+|+|+.++-
T Consensus 336 ---~e~l~~mk~gaiVvN 350 (488)
T 3ond_A 336 ---LDHMKKMKNNAIVCN 350 (488)
T ss_dssp ---HHHHTTSCTTEEEEE
T ss_pred ---HHHHHhcCCCeEEEE
Confidence 456778899886654
No 441
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=28.53 E-value=23 Score=32.57 Aligned_cols=33 Identities=27% Similarity=0.312 Sum_probs=22.6
Q ss_pred CCCEEEEECCCCCH-HHH-HHHhcCCCcEEEEeCCC
Q 025071 115 NESKALSIGARVGQ-EVA-ALKLVGVSDSIGIDLVP 148 (258)
Q Consensus 115 ~~~~VLDIGcGtG~-~~~-~L~~~g~~~v~GvD~s~ 148 (258)
++.+|+=+|+|.=. .+. .+...|. +|+++|.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~ 205 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRP 205 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence 47899999997432 222 3345685 799999864
No 442
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=28.35 E-value=25 Score=32.29 Aligned_cols=21 Identities=14% Similarity=0.080 Sum_probs=17.9
Q ss_pred HHHHHHHHhcccCCcEEEEEe
Q 025071 183 WKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 183 ~~~l~Ei~RVLKPGG~lii~v 203 (258)
+.++..+.++|+|||+++++.
T Consensus 254 ~~~L~~a~~~L~~gGRl~VIS 274 (347)
T 3tka_A 254 EQALKSSLNVLAPGGRLSIIS 274 (347)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEEe
Confidence 467888999999999998874
No 443
>2qrv_B DNA (cytosine-5)-methyltransferase 3-like; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=27.96 E-value=44 Score=28.77 Aligned_cols=74 Identities=16% Similarity=0.141 Sum_probs=41.0
Q ss_pred CCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCC----CCCeeEEEec----cccccCChHHHHH
Q 025071 116 ESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFD----NGTFDFEFSN----VFDHALYPWKFVG 187 (258)
Q Consensus 116 ~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~----d~SFD~V~s~----~l~h~~~p~~~l~ 187 (258)
.-+++|+=||.|. .|.+.|+. + +.+.....+..+|+.++.-. -..+|+|+.+ .+...-.....+-
T Consensus 33 ~~~vidLFaGig~---Gl~~aGf~-~---~~N~~~~~~~~~DI~~i~~~~i~~~~~~DlliGG~PCQ~FS~ag~rg~Lf~ 105 (230)
T 2qrv_B 33 PVRVLSLFEDIKK---ELTSLGFL-E---SGSDPGQLKHVVDVTDTVRKDVEEWGPFDLVYGATPPLGHTCDRPPSWYLF 105 (230)
T ss_dssp CCCEEEESSCCTT---TTTTTTSC-C--------CCEEEESCCTTCCHHHHHHTCCCSEEEEECCCTTTSSCSCTHHHHH
T ss_pred CceEEEeccChhH---HHHHCCCc-h---hhcCCCCcEecCChhhCCHhHhcccCCCCEEEECCCCCcccccCCCchHHH
Confidence 3479999999775 25566753 2 22111123466788777532 1368999874 3333223345556
Q ss_pred HHHhc---ccCC
Q 025071 188 EIERT---LKPA 196 (258)
Q Consensus 188 Ei~RV---LKPG 196 (258)
|+.|+ +||-
T Consensus 106 ef~Riv~~~rPk 117 (230)
T 2qrv_B 106 QFHRLLQYARPK 117 (230)
T ss_dssp HHHHHHHHHCCC
T ss_pred HHHHHHHHHCcC
Confidence 66665 4674
No 444
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=27.40 E-value=2.3e+02 Score=25.26 Aligned_cols=32 Identities=25% Similarity=0.345 Sum_probs=24.2
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeC
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDL 146 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~ 146 (258)
.+.+||=||||. |. .+.+|+..|..+++-+|.
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~ 150 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIGEIILIDN 150 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECC
Confidence 357899999973 33 356778889888888885
No 445
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=27.40 E-value=4.6 Score=36.62 Aligned_cols=85 Identities=12% Similarity=0.022 Sum_probs=44.4
Q ss_pred CCCEEEEECCCCCHHH----HHHHhcCCCcEEEEeCCCCCCc--------eeeecCCCC-CCC--CCCeeEEEeccc-cc
Q 025071 115 NESKALSIGARVGQEV----AALKLVGVSDSIGIDLVPRPPL--------VIKGDFHAQ-PFD--NGTFDFEFSNVF-DH 178 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~----~~L~~~g~~~v~GvD~s~~~~~--------~~~aDa~~L-Pf~--d~SFD~V~s~~l-~h 178 (258)
.+.+|+=+|+| ... ..++..|. +|+++|.++.... .+..|.... .+. -..+|+|+.++- ..
T Consensus 165 ~~~~V~ViGaG--~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~ 241 (369)
T 2eez_A 165 APASVVILGGG--TVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPG 241 (369)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC---
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCc
Confidence 35789999985 443 23445676 8999997642110 011111000 000 025799887532 11
Q ss_pred cCChHHHHHHHHhcccCCcEEEEE
Q 025071 179 ALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 179 ~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
...|....+++.+.+||||.++..
T Consensus 242 ~~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 242 AKAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp ----CCSCHHHHTTSCTTCEEEEC
T ss_pred cccchhHHHHHHHhhcCCCEEEEE
Confidence 011111246788889999987654
No 446
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=26.72 E-value=31 Score=31.58 Aligned_cols=82 Identities=13% Similarity=0.042 Sum_probs=41.8
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCC--CCCeeEEEec-----cccccCChHHH
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFD--NGTFDFEFSN-----VFDHALYPWKF 185 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~--d~SFD~V~s~-----~l~h~~~p~~~ 185 (258)
.+.+|.=||.|. |. .+..++..|. +|++.|.+..........+....++ -...|+|+.. .-.|+.+
T Consensus 175 ~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~---- 249 (365)
T 4hy3_A 175 AGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLG---- 249 (365)
T ss_dssp SSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCC----
T ss_pred CCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcC----
Confidence 367899998873 22 2333444565 7999997532110000001001111 1346888763 1233332
Q ss_pred HHHHHhcccCCcEEEEE
Q 025071 186 VGEIERTLKPAGVCVLH 202 (258)
Q Consensus 186 l~Ei~RVLKPGG~lii~ 202 (258)
++....+|||++++=+
T Consensus 250 -~~~l~~mk~gailIN~ 265 (365)
T 4hy3_A 250 -AEAFSSMRRGAAFILL 265 (365)
T ss_dssp -HHHHHTSCTTCEEEEC
T ss_pred -HHHHhcCCCCcEEEEC
Confidence 5667788998877543
No 447
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=26.70 E-value=31 Score=30.54 Aligned_cols=81 Identities=12% Similarity=0.004 Sum_probs=42.1
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCCC--CCeeEEEecc-----ccccCChHHH
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFDN--GTFDFEFSNV-----FDHALYPWKF 185 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~d--~SFD~V~s~~-----l~h~~~p~~~ 185 (258)
.+.+|.=||+|. |. .+..+...|. +|++.|.++.........+....+++ ...|+|+... ..|+.+
T Consensus 141 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~---- 215 (313)
T 2ekl_A 141 AGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIREKAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIID---- 215 (313)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBC----
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchhHHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhC----
Confidence 467899998863 22 2334445675 79999986532100000000001111 2468888741 334333
Q ss_pred HHHHHhcccCCcEEEE
Q 025071 186 VGEIERTLKPAGVCVL 201 (258)
Q Consensus 186 l~Ei~RVLKPGG~lii 201 (258)
++....+|||++++-
T Consensus 216 -~~~l~~mk~ga~lIn 230 (313)
T 2ekl_A 216 -YPQFELMKDNVIIVN 230 (313)
T ss_dssp -HHHHHHSCTTEEEEE
T ss_pred -HHHHhcCCCCCEEEE
Confidence 355567899876544
No 448
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=26.65 E-value=2e+02 Score=25.69 Aligned_cols=83 Identities=10% Similarity=-0.108 Sum_probs=49.3
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCC--------------CCC-ceeeecCCCCCCCCCCeeEEEecccccc
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVP--------------RPP-LVIKGDFHAQPFDNGTFDFEFSNVFDHA 179 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~--------------~~~-~~~~aDa~~LPf~d~SFD~V~s~~l~h~ 179 (258)
.+++||.++.+-|..+..|+..+ ++.+.-|. ... .+...+. +.-..+.||+|+...-.+.
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~~---~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~lpk~~ 112 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEHK---PYSIGDSYISELATRENLRLNGIDESSVKFLDS--TADYPQQPGVVLIKVPKTL 112 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGGC---CEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET--TSCCCSSCSEEEEECCSCH
T ss_pred CCCCEEEECCCCCHHHHhhccCC---ceEEEhHHHHHHHHHHHHHHcCCCccceEeccc--ccccccCCCEEEEEcCCCH
Confidence 45689999999999998887543 44443221 000 1111111 1122357999887421222
Q ss_pred CChHHHHHHHHhcccCCcEEEEE
Q 025071 180 LYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 180 ~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
..-...+.++...|+||+.+++.
T Consensus 113 ~~l~~~L~~l~~~l~~~~~i~~~ 135 (375)
T 4dcm_A 113 ALLEQQLRALRKVVTSDTRIIAG 135 (375)
T ss_dssp HHHHHHHHHHHTTCCTTSEEEEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEEE
Confidence 22344568999999999988654
No 449
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=26.56 E-value=42 Score=30.09 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=23.6
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCC
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVP 148 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~ 148 (258)
.+.+|.=||+|. |. .+..+...|. +|++.|.++
T Consensus 139 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~ 173 (324)
T 3hg7_A 139 KGRTLLILGTGSIGQHIAHTGKHFGM-KVLGVSRSG 173 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred ccceEEEEEECHHHHHHHHHHHhCCC-EEEEEcCCh
Confidence 467899999984 33 3445556776 799999865
No 450
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=26.38 E-value=1e+02 Score=28.61 Aligned_cols=73 Identities=16% Similarity=0.145 Sum_probs=42.7
Q ss_pred CEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCC----CCCeeEEEec----cccccCChHHHHHH
Q 025071 117 SKALSIGARVGQEVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFD----NGTFDFEFSN----VFDHALYPWKFVGE 188 (258)
Q Consensus 117 ~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~----d~SFD~V~s~----~l~h~~~p~~~l~E 188 (258)
-+++|+=||.|. .|.+.|+. + +.+.....+..+|+.++.-. -..+|+|+.+ .+.-.......+-|
T Consensus 190 ikvidLFaGiGg---Gl~~aGf~-v---~~N~~~~~~~~~DI~~i~~~~i~~~~~~DlliGG~PCQ~FS~A~~Rg~Lf~e 262 (386)
T 2pv0_B 190 VRVLSLFEDIKK---ELTSLGFL-E---SGSDPGQLKHVVDVTDTVRKDVEEWGPFDLVYGATPPLGHTCDRPPSWYLFQ 262 (386)
T ss_dssp CCEEEESSCCHH---HHHHTTSS-C---SSCCSCSEEEESCCTTCCHHHHHHSCCCSEEEEECCCTTTCSCSCTHHHHHH
T ss_pred ceeeEEeccCCh---hHhhcCcc-H---HHcCCCCcEEeCChhhCCHhHhcccCCCCEEEECCCCCcccccCCcchHHHH
Confidence 479999999995 46677763 3 22211123566788776522 1368999874 34333233455556
Q ss_pred HHhc---ccCC
Q 025071 189 IERT---LKPA 196 (258)
Q Consensus 189 i~RV---LKPG 196 (258)
+.|+ +||-
T Consensus 263 f~Riv~~~rPk 273 (386)
T 2pv0_B 263 FHRLLQYARPK 273 (386)
T ss_dssp HHHHHHHHSCC
T ss_pred HHHHHHHhCCC
Confidence 6555 5673
No 451
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=26.36 E-value=99 Score=28.40 Aligned_cols=86 Identities=16% Similarity=0.104 Sum_probs=52.3
Q ss_pred CCEEEEECCCC-CHH-HHHHHhcCCCcEEEEeCCCC--------CCceeeecCCCCCC----CCCCeeEEEeccccccCC
Q 025071 116 ESKALSIGARV-GQE-VAALKLVGVSDSIGIDLVPR--------PPLVIKGDFHAQPF----DNGTFDFEFSNVFDHALY 181 (258)
Q Consensus 116 ~~~VLDIGcGt-G~~-~~~L~~~g~~~v~GvD~s~~--------~~~~~~aDa~~LPf----~d~SFD~V~s~~l~h~~~ 181 (258)
..+|+=+|||. |.. +..|.+.|. .|+.+|.++. ...++.||+.+... .-+..|+|++. +..- .
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~-~~~~-~ 80 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINA-IDDP-Q 80 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEEC-CSSH-H
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEEC-CCCh-H
Confidence 35688889863 322 344556675 7999998642 23467778765321 23468888874 2210 1
Q ss_pred hHHHHHHHHhcccCCcEEEEEec
Q 025071 182 PWKFVGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 182 p~~~l~Ei~RVLKPGG~lii~v~ 204 (258)
-...+.+..|-+.|+..++.-..
T Consensus 81 ~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 81 TNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHHHHHhCCCCeEEEEEC
Confidence 12345677888889887777654
No 452
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=26.00 E-value=25 Score=29.57 Aligned_cols=80 Identities=15% Similarity=0.027 Sum_probs=43.0
Q ss_pred CEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCC--------ceeeecCCCCCCCCCCeeEEEeccccccCChHHHH
Q 025071 117 SKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPP--------LVIKGDFHAQPFDNGTFDFEFSNVFDHALYPWKFV 186 (258)
Q Consensus 117 ~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~--------~~~~aDa~~LPf~d~SFD~V~s~~l~h~~~p~~~l 186 (258)
.+|.=||||. |. .+..|.+.|...|+..|.++... .....+.+++ -+..|+|+..+-... -..++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~Dvvi~av~~~~--~~~v~ 85 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEV---NPYAKLYIVSLKDSA--FAELL 85 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGS---CSCCSEEEECCCHHH--HHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHH---hcCCCEEEEecCHHH--HHHHH
Confidence 5789999973 22 34455566763378888753211 1111222221 135799988532221 14455
Q ss_pred HHHHhcccCCcEEEE
Q 025071 187 GEIERTLKPAGVCVL 201 (258)
Q Consensus 187 ~Ei~RVLKPGG~lii 201 (258)
+++...++||..++-
T Consensus 86 ~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 86 QGIVEGKREEALMVH 100 (266)
T ss_dssp HHHHTTCCTTCEEEE
T ss_pred HHHHhhcCCCcEEEE
Confidence 677777777665444
No 453
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=25.57 E-value=74 Score=28.63 Aligned_cols=84 Identities=12% Similarity=0.035 Sum_probs=41.7
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCCCCCeeEEEeccccccCChHHHH-HHHHh
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFDNGTFDFEFSNVFDHALYPWKFV-GEIER 191 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~d~SFD~V~s~~l~h~~~p~~~l-~Ei~R 191 (258)
.+.+|.=||+|. |. .+..+...|. +|++.|.++....-... ..++.---..-|+|+..+ ..-..-...+ ++...
T Consensus 170 ~gktiGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~-~~sl~ell~~aDvVil~v-P~t~~t~~li~~~~l~ 246 (340)
T 4dgs_A 170 KGKRIGVLGLGQIGRALASRAEAFGM-SVRYWNRSTLSGVDWIA-HQSPVDLARDSDVLAVCV-AASAATQNIVDASLLQ 246 (340)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCTTSCCEE-CSSHHHHHHTCSEEEECC-----------CHHHHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCcccccCcee-cCCHHHHHhcCCEEEEeC-CCCHHHHHHhhHHHHh
Confidence 467899999873 32 2334445675 79999986543210000 001100012458887731 1000111122 56777
Q ss_pred cccCCcEEEE
Q 025071 192 TLKPAGVCVL 201 (258)
Q Consensus 192 VLKPGG~lii 201 (258)
.+|||.+++=
T Consensus 247 ~mk~gailIN 256 (340)
T 4dgs_A 247 ALGPEGIVVN 256 (340)
T ss_dssp HTTTTCEEEE
T ss_pred cCCCCCEEEE
Confidence 8999887654
No 454
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=25.21 E-value=51 Score=29.97 Aligned_cols=86 Identities=14% Similarity=0.030 Sum_probs=48.9
Q ss_pred CCCEEEEECCCCCHHHHHHHhcCCCcEEEEeCCCCCC------ceeeecCCCCCCCCCCeeEEEeccccccC---ChHHH
Q 025071 115 NESKALSIGARVGQEVAALKLVGVSDSIGIDLVPRPP------LVIKGDFHAQPFDNGTFDFEFSNVFDHAL---YPWKF 185 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L~~~g~~~v~GvD~s~~~~------~~~~aDa~~LPf~d~SFD~V~s~~l~h~~---~p~~~ 185 (258)
.+.+||+++-+-|..+..+... .+++.+.-+.... .+-..-...+.-....||+|+.- +.... .-+..
T Consensus 45 ~~~~~l~~n~~~g~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~v~~~-~Pk~k~~~~~~~~ 121 (381)
T 3dmg_A 45 FGERALDLNPGVGWGSLPLEGR--MAVERLETSRAAFRCLTASGLQARLALPWEAAAGAYDLVVLA-LPAGRGTAYVQAS 121 (381)
T ss_dssp CSSEEEESSCTTSTTTGGGBTT--BEEEEEECBHHHHHHHHHTTCCCEECCGGGSCTTCEEEEEEE-CCGGGCHHHHHHH
T ss_pred hCCcEEEecCCCCccccccCCC--CceEEEeCcHHHHHHHHHcCCCccccCCccCCcCCCCEEEEE-CCcchhHHHHHHH
Confidence 3468999999999766555421 3566554321000 00000011122235689999873 22111 12456
Q ss_pred HHHHHhcccCCcEEEEEe
Q 025071 186 VGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 186 l~Ei~RVLKPGG~lii~v 203 (258)
+.++.++|+|||.+++.-
T Consensus 122 l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 122 LVAAARALRMGGRLYLAG 139 (381)
T ss_dssp HHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhCCCCCEEEEEE
Confidence 788999999999998864
No 455
>1v54_G Cytochrome C oxidase polypeptide VIA-heart; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: f.23.2.1 PDB: 1v55_G* 2dyr_G* 2dys_G* 2eij_G* 2eik_G* 2eil_G* 2eim_G* 2ein_G* 2zxw_G* 3abk_G* 3abl_G* 3abm_G* 3ag1_G* 3ag2_G* 3ag3_G* 3ag4_G* 3asn_G* 3aso_G* 2occ_G* 1oco_G* ...
Probab=25.04 E-value=1.1e+02 Score=22.15 Aligned_cols=44 Identities=18% Similarity=0.136 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCCCcccC-CCC
Q 025071 14 PFFVSLFFSFFLLTFLCLSRSPHHRKPTTGTPSPKKSSAGGESNDLRIR-PGY 65 (258)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r-~~f 65 (258)
.=-+|+|+.+|.+++..+.-...+.. ++ .+..++=+.+++| +.|
T Consensus 16 Wkkis~~va~P~v~l~~~n~y~~~~e-------~~-~pE~~~Y~yl~IR~K~F 60 (85)
T 1v54_G 16 WRFLTFGLALPSVALCTLNSWLHSGH-------RE-RPAFIPYHHLRIRTKPF 60 (85)
T ss_dssp HHHHHHHTHHHHHHHHHHHHTTSCSC-------CC-CCCCCCCTTSSCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccC-------CC-CCCCCCCchhheecCCC
Confidence 44689999999988775542222211 11 1223456677888 555
No 456
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=24.82 E-value=2.7e+02 Score=24.59 Aligned_cols=85 Identities=14% Similarity=0.157 Sum_probs=43.8
Q ss_pred CCCEEEEECCCCCHHHH-HHHhcCCCc-EEEEeCCCCCC-c------eeeecCCCCCCCCCCeeEEEeccccccCChHHH
Q 025071 115 NESKALSIGARVGQEVA-ALKLVGVSD-SIGIDLVPRPP-L------VIKGDFHAQPFDNGTFDFEFSNVFDHALYPWKF 185 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~-~L~~~g~~~-v~GvD~s~~~~-~------~~~aDa~~LPf~d~SFD~V~s~~l~h~~~p~~~ 185 (258)
.+.+|+--|+|+..... .....+... ..-+|.++... . +-+-.-+. +.+...|.|+.....+ .++.
T Consensus 318 ~gk~v~~yGa~~~g~~l~~~~~~~~~~i~~~~D~~~~k~g~~~~g~~ipi~~p~~--~~~~~~d~vl~~~~~~---~~ei 392 (416)
T 4e2x_A 318 EGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTPDKQNRLTPGAHIPVRPASA--FSDPYPDYALLFAWNH---AEEI 392 (416)
T ss_dssp TTCCEEEECCCSHHHHHHHHHTCCTTTSCCEEESCGGGTTEECTTTCCEEEEGGG--CCSSCCSEEEESCGGG---HHHH
T ss_pred cCCeEEEEccccHHHHHHHhcCCCcceeeEEEeCCccccCccCCCCCCcCCCHHH--HhhcCCCEEEEecchh---HHHH
Confidence 56789888888644332 122222111 23468765321 1 11111222 2345678877633222 3344
Q ss_pred HHHHHhcccCCcEEEEEec
Q 025071 186 VGEIERTLKPAGVCVLHVA 204 (258)
Q Consensus 186 l~Ei~RVLKPGG~lii~v~ 204 (258)
++.+...+.-||++++-+|
T Consensus 393 ~~~~~~~~~~g~~~~~~~p 411 (416)
T 4e2x_A 393 MAKEQEFHQAGGRWILYVP 411 (416)
T ss_dssp HHHCHHHHHTTCEEEECSS
T ss_pred HHHHHHHHhcCCEEEEECC
Confidence 4555566667999988665
No 457
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=24.59 E-value=44 Score=29.81 Aligned_cols=80 Identities=18% Similarity=0.202 Sum_probs=43.0
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCCC--CCeeEEEec-----cccccCChHHH
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFDN--GTFDFEFSN-----VFDHALYPWKF 185 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~d--~SFD~V~s~-----~l~h~~~p~~~ 185 (258)
.+.+|.=||+|. |. .+..+...|. +|++.|.++... . ...+....+++ ...|+|+.. ...|+.+
T Consensus 144 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~-~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~---- 216 (333)
T 1dxy_A 144 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKG-D-HPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIIN---- 216 (333)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSS-C-CTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBC----
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCcchh-h-HhccccCCHHHHHhcCCEEEEcCCCchhHHHHhC----
Confidence 467899998872 22 2334445675 799999765432 1 00000001111 245888774 1234333
Q ss_pred HHHHHhcccCCcEEEEE
Q 025071 186 VGEIERTLKPAGVCVLH 202 (258)
Q Consensus 186 l~Ei~RVLKPGG~lii~ 202 (258)
++....+|||++++-+
T Consensus 217 -~~~l~~mk~ga~lIn~ 232 (333)
T 1dxy_A 217 -EAAFNLMKPGAIVINT 232 (333)
T ss_dssp -HHHHHHSCTTEEEEEC
T ss_pred -HHHHhhCCCCcEEEEC
Confidence 4566678998766553
No 458
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=24.13 E-value=56 Score=34.02 Aligned_cols=32 Identities=13% Similarity=0.211 Sum_probs=27.7
Q ss_pred CEEEEECCCCCHHHHHHHhcCC-CcEEEEeCCC
Q 025071 117 SKALSIGARVGQEVAALKLVGV-SDSIGIDLVP 148 (258)
Q Consensus 117 ~~VLDIGcGtG~~~~~L~~~g~-~~v~GvD~s~ 148 (258)
-+++|+=||.|.+...|.+.|+ ..+.++|+.+
T Consensus 541 l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~ 573 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWD 573 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHHTSEEEEEEECSSH
T ss_pred CeEEEeccCccHHHHHHHHCCCCceEEEEECCH
Confidence 4799999999999999988897 5678999864
No 459
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=23.83 E-value=30 Score=30.62 Aligned_cols=21 Identities=29% Similarity=0.417 Sum_probs=17.6
Q ss_pred HHHHHHHHhcccCCcEEEEEe
Q 025071 183 WKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 183 ~~~l~Ei~RVLKPGG~lii~v 203 (258)
+.++..+.++|+|||++++..
T Consensus 225 ~~~l~~~~~~l~~ggr~~vis 245 (301)
T 1m6y_A 225 KEFLKKAEDLLNPGGRIVVIS 245 (301)
T ss_dssp HHHHHHGGGGEEEEEEEEEEE
T ss_pred HHHHHHHHHhhCCCCEEEEEe
Confidence 456788899999999998864
No 460
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=23.37 E-value=43 Score=31.00 Aligned_cols=31 Identities=23% Similarity=0.153 Sum_probs=25.1
Q ss_pred CEEEEECCCCCHHHHHHHhcC--CCc----EEEEeCC
Q 025071 117 SKALSIGARVGQEVAALKLVG--VSD----SIGIDLV 147 (258)
Q Consensus 117 ~~VLDIGcGtG~~~~~L~~~g--~~~----v~GvD~s 147 (258)
-+|||+-||.|.....|.+.| ..- |.++|+.
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid 47 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWF 47 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCB
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecC
Confidence 489999999999999998877 333 6778875
No 461
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=23.30 E-value=60 Score=29.31 Aligned_cols=80 Identities=10% Similarity=0.023 Sum_probs=42.7
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCceeeecCCCC-CCCC--CCeeEEEecc-----ccccCChHH
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQ-PFDN--GTFDFEFSNV-----FDHALYPWK 184 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~L-Pf~d--~SFD~V~s~~-----l~h~~~p~~ 184 (258)
.+.+|-=||+|. |. .+..+...|. +|++.|.++....... .+... .+++ ...|+|+... -.|+.+
T Consensus 172 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~-g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~--- 246 (345)
T 4g2n_A 172 TGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRTRLSHALEE-GAIYHDTLDSLLGASDIFLIAAPGRPELKGFLD--- 246 (345)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHT-TCEECSSHHHHHHTCSEEEECSCCCGGGTTCBC---
T ss_pred CCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCCCcchhhhc-CCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhC---
Confidence 367899999873 22 2344445675 7999998653211100 11111 1111 2468888741 223332
Q ss_pred HHHHHHhcccCCcEEEE
Q 025071 185 FVGEIERTLKPAGVCVL 201 (258)
Q Consensus 185 ~l~Ei~RVLKPGG~lii 201 (258)
++....+|||.+++=
T Consensus 247 --~~~l~~mk~gailIN 261 (345)
T 4g2n_A 247 --HDRIAKIPEGAVVIN 261 (345)
T ss_dssp --HHHHHHSCTTEEEEE
T ss_pred --HHHHhhCCCCcEEEE
Confidence 466677899876643
No 462
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=23.07 E-value=59 Score=27.46 Aligned_cols=82 Identities=17% Similarity=0.048 Sum_probs=43.3
Q ss_pred CEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCC-------ceeee------------cCCCCCCCCCCeeEEEecc
Q 025071 117 SKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPP-------LVIKG------------DFHAQPFDNGTFDFEFSNV 175 (258)
Q Consensus 117 ~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~-------~~~~a------------Da~~LPf~d~SFD~V~s~~ 175 (258)
.+|.=||+|. |. ++..|++.|. +|+.+|.++... ..... +..++.-.-...|+|+..+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v 82 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALT 82 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEe
Confidence 4789999874 22 3445666675 799999753210 00110 1101100002689998853
Q ss_pred ccccCChHHHHHHHHhcccCCcEEEE
Q 025071 176 FDHALYPWKFVGEIERTLKPAGVCVL 201 (258)
Q Consensus 176 l~h~~~p~~~l~Ei~RVLKPGG~lii 201 (258)
-.+ .-..+++++...++||..++.
T Consensus 83 ~~~--~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 83 KAQ--QLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp CHH--HHHHHHHHHGGGCCTTCEEEE
T ss_pred ccc--cHHHHHHHHHHhcCCCCEEEE
Confidence 211 124566778778887765443
No 463
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=22.63 E-value=37 Score=30.07 Aligned_cols=81 Identities=12% Similarity=-0.016 Sum_probs=41.9
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeC-CCCCCceeeecCCCC-CCCC--CCeeEEEecc-----ccccCChH
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDL-VPRPPLVIKGDFHAQ-PFDN--GTFDFEFSNV-----FDHALYPW 183 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~-s~~~~~~~~aDa~~L-Pf~d--~SFD~V~s~~-----l~h~~~p~ 183 (258)
.+.+|.=||+|. |. .+..+...|. +|++.|. ++.........+... .+++ ...|+|+... ..|+.+
T Consensus 145 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~-- 221 (320)
T 1gdh_A 145 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFN-- 221 (320)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBS--
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcC--
Confidence 467899998873 22 2334445675 7999998 653210000000000 1111 2468887741 233332
Q ss_pred HHHHHHHhcccCCcEEEE
Q 025071 184 KFVGEIERTLKPAGVCVL 201 (258)
Q Consensus 184 ~~l~Ei~RVLKPGG~lii 201 (258)
++....+|||++++-
T Consensus 222 ---~~~l~~mk~gailIn 236 (320)
T 1gdh_A 222 ---KATIKSLPQGAIVVN 236 (320)
T ss_dssp ---HHHHTTSCTTEEEEE
T ss_pred ---HHHHhhCCCCcEEEE
Confidence 456678899876543
No 464
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=22.57 E-value=73 Score=26.69 Aligned_cols=78 Identities=12% Similarity=-0.027 Sum_probs=42.1
Q ss_pred EEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCc------eeeecCCCCCCCCCCeeEEEeccccccCChHHHHHHH
Q 025071 118 KALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPL------VIKGDFHAQPFDNGTFDFEFSNVFDHALYPWKFVGEI 189 (258)
Q Consensus 118 ~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~------~~~aDa~~LPf~d~SFD~V~s~~l~h~~~p~~~l~Ei 189 (258)
+|.=||||. |. .+..|.+ |. +|+.+|.++.... ....+..+ .-...|+|+..+-.. ..-..+++++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~D~vi~~v~~~-~~~~~v~~~l 76 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEFGSEAVPLE---RVAEARVIFTCLPTT-REVYEVAEAL 76 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHHCCEECCGG---GGGGCSEEEECCSSH-HHHHHHHHHH
T ss_pred eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCCCcccCHHH---HHhCCCEEEEeCCCh-HHHHHHHHHH
Confidence 577889985 33 3456667 75 6999997643210 11111111 013579988752111 0112355677
Q ss_pred HhcccCCcEEEE
Q 025071 190 ERTLKPAGVCVL 201 (258)
Q Consensus 190 ~RVLKPGG~lii 201 (258)
...++||..++.
T Consensus 77 ~~~l~~~~~vv~ 88 (289)
T 2cvz_A 77 YPYLREGTYWVD 88 (289)
T ss_dssp TTTCCTTEEEEE
T ss_pred HhhCCCCCEEEE
Confidence 778888765543
No 465
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=22.55 E-value=28 Score=30.15 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=22.1
Q ss_pred CCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCC
Q 025071 116 ESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVP 148 (258)
Q Consensus 116 ~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~ 148 (258)
..+|--||+|. |. .+..|++.|. +|++.|.++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCH
Confidence 35788998874 22 3445667776 799999864
No 466
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=22.23 E-value=87 Score=23.82 Aligned_cols=87 Identities=14% Similarity=0.073 Sum_probs=44.9
Q ss_pred CCCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCC---------CceeeecCCCCC----CCCCCeeEEEeccccc
Q 025071 114 FNESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRP---------PLVIKGDFHAQP----FDNGTFDFEFSNVFDH 178 (258)
Q Consensus 114 ~~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~---------~~~~~aDa~~LP----f~d~SFD~V~s~~l~h 178 (258)
..+.+|+=+|||. |. .+..|.+.|. +|+++|.++.. ..++.+|..... ..-+.+|+|+..+=..
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~ 95 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD 95 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc
Confidence 3567899999864 32 2344556675 79999975321 123334432211 0123589888742110
Q ss_pred cCChHHHHHHHHhcccCCcEEEEEe
Q 025071 179 ALYPWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 179 ~~~p~~~l~Ei~RVLKPGG~lii~v 203 (258)
.....+.++.|-+.|...++...
T Consensus 96 --~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 96 --STNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp --HHHHHHHHHHHHTSCCSEEEEEC
T ss_pred --HHHHHHHHHHHHHCCCCeEEEEE
Confidence 11223345555555555555543
No 467
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=22.17 E-value=35 Score=30.09 Aligned_cols=81 Identities=16% Similarity=0.189 Sum_probs=47.8
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCC-------------cee-eecCCCCCCCCCCeeEEEeccccc
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPP-------------LVI-KGDFHAQPFDNGTFDFEFSNVFDH 178 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~-------------~~~-~aDa~~LPf~d~SFD~V~s~~l~h 178 (258)
...+|-=||+|+ |. ++..++ .|+ +|++.|.++... .+. ..|.. +-..-|+|+.++.+.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~-~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~----~~~~aDlVieavpe~ 84 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKH-EVVLQDVSEKALEAAREQIPEELLSKIEFTTTLE----KVKDCDIVMEAVFED 84 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCT----TGGGCSEEEECCCSC
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCC-EEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHH----HHcCCCEEEEcCcCC
Confidence 356899999995 33 567778 886 799999864211 011 11221 123568998865443
Q ss_pred cCChHHHHHHHHhcccCCcEEEEEe
Q 025071 179 ALYPWKFVGEIERTLKPAGVCVLHV 203 (258)
Q Consensus 179 ~~~p~~~l~Ei~RVLKPGG~lii~v 203 (258)
..-...+++++..+ ||.+++..+
T Consensus 85 ~~vk~~l~~~l~~~--~~~Ilasnt 107 (293)
T 1zej_A 85 LNTKVEVLREVERL--TNAPLCSNT 107 (293)
T ss_dssp HHHHHHHHHHHHTT--CCSCEEECC
T ss_pred HHHHHHHHHHHhcC--CCCEEEEEC
Confidence 32234556777776 776665433
No 468
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=21.90 E-value=45 Score=30.13 Aligned_cols=80 Identities=14% Similarity=0.118 Sum_probs=44.3
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCCC--CCeeEEEec-----cccccCChHHH
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFDN--GTFDFEFSN-----VFDHALYPWKF 185 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~d--~SFD~V~s~-----~l~h~~~p~~~ 185 (258)
.+.+|.=||+|. |. .+..+...|. +|++.|.++.... ..+ .....+++ ...|+|+.. .-.|+.+
T Consensus 147 ~gktvgIiGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~-~~~-~~~~~l~ell~~aDvV~l~~Plt~~t~~li~---- 219 (343)
T 2yq5_A 147 YNLTVGLIGVGHIGSAVAEIFSAMGA-KVIAYDVAYNPEF-EPF-LTYTDFDTVLKEADIVSLHTPLFPSTENMIG---- 219 (343)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCGGG-TTT-CEECCHHHHHHHCSEEEECCCCCTTTTTCBC----
T ss_pred CCCeEEEEecCHHHHHHHHHHhhCCC-EEEEECCChhhhh-hcc-ccccCHHHHHhcCCEEEEcCCCCHHHHHHhh----
Confidence 367899999883 32 3444556676 7999998653210 000 00001111 346888774 1234333
Q ss_pred HHHHHhcccCCcEEEEE
Q 025071 186 VGEIERTLKPAGVCVLH 202 (258)
Q Consensus 186 l~Ei~RVLKPGG~lii~ 202 (258)
++....+|||.+++=+
T Consensus 220 -~~~l~~mk~gailIN~ 235 (343)
T 2yq5_A 220 -EKQLKEMKKSAYLINC 235 (343)
T ss_dssp -HHHHHHSCTTCEEEEC
T ss_pred -HHHHhhCCCCcEEEEC
Confidence 4566778998877543
No 469
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=21.79 E-value=1.9e+02 Score=25.51 Aligned_cols=45 Identities=20% Similarity=0.148 Sum_probs=28.6
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCH---HHHHHHhcCCCcEEEEeCC
Q 025071 102 RFFQDLKQRHFLFNESKALSIGARVGQ---EVAALKLVGVSDSIGIDLV 147 (258)
Q Consensus 102 ~~~~~L~~~~~l~~~~~VLDIGcGtG~---~~~~L~~~g~~~v~GvD~s 147 (258)
.+.+.|.+.+.-..+.++|=+|+| |. .+.+|++.|..+|+-++.+
T Consensus 140 Gf~~~L~~~~~~l~gk~~lVlGaG-G~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 140 GYMRALKEAGHDIIGKKMTICGAG-GAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp HHHHHHHHTTCCCTTSEEEEECCS-HHHHHHHHHHHHTTCSEEEEEECS
T ss_pred HHHHHHHHcCCCccCCEEEEECCC-hHHHHHHHHHHHCCCCEEEEEECC
Confidence 344444443333467899999987 43 2345667787678877775
No 470
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=21.50 E-value=3.8e+02 Score=22.88 Aligned_cols=80 Identities=16% Similarity=0.015 Sum_probs=44.9
Q ss_pred CEEEEECCCCCH--HHHHHHhcCCCcEEEEeCCCCCC-----ceeee---------------cCCCCCCCCCCeeEEEec
Q 025071 117 SKALSIGARVGQ--EVAALKLVGVSDSIGIDLVPRPP-----LVIKG---------------DFHAQPFDNGTFDFEFSN 174 (258)
Q Consensus 117 ~~VLDIGcGtG~--~~~~L~~~g~~~v~GvD~s~~~~-----~~~~a---------------Da~~LPf~d~SFD~V~s~ 174 (258)
.+|+=||+|.=. ++..|++.|. +|+.++.++... ..+.. |.+++ .+.+|+|+..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~---~~~~DlVila 78 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAEL---ETKPDCTLLC 78 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGC---SSCCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHc---CCCCCEEEEe
Confidence 478889888422 3455666774 798888754200 00111 11111 1368999885
Q ss_pred cccccCChHHHHHHHHhcccCCcEEEEE
Q 025071 175 VFDHALYPWKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 175 ~l~h~~~p~~~l~Ei~RVLKPGG~lii~ 202 (258)
+=.+. -..+++++...++|+..++..
T Consensus 79 vK~~~--~~~~l~~l~~~l~~~t~Iv~~ 104 (320)
T 3i83_A 79 IKVVE--GADRVGLLRDAVAPDTGIVLI 104 (320)
T ss_dssp CCCCT--TCCHHHHHTTSCCTTCEEEEE
T ss_pred cCCCC--hHHHHHHHHhhcCCCCEEEEe
Confidence 21111 124678888889888765543
No 471
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=21.42 E-value=2e+02 Score=24.83 Aligned_cols=44 Identities=23% Similarity=0.152 Sum_probs=27.3
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCCH---HHHHHHhcCCCcEEEEeCC
Q 025071 103 FFQDLKQRHFLFNESKALSIGARVGQ---EVAALKLVGVSDSIGIDLV 147 (258)
Q Consensus 103 ~~~~L~~~~~l~~~~~VLDIGcGtG~---~~~~L~~~g~~~v~GvD~s 147 (258)
+.+.|.+...-..+.++|=+|+| |. .+.+|++.|..+|+-++.+
T Consensus 114 ~~~~l~~~~~~l~~k~vlVlGaG-G~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 114 FGRGMEEGLPNAKLDSVVQVGAG-GVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp HHHHHHHHCTTCCCSEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSS
T ss_pred HHHHHHHhCcCcCCCEEEEECCc-HHHHHHHHHHHHCCCCEEEEEECC
Confidence 34444333323357899999997 33 2345667787678877765
No 472
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=21.01 E-value=76 Score=29.52 Aligned_cols=33 Identities=12% Similarity=-0.016 Sum_probs=22.6
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCC
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVP 148 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~ 148 (258)
.+.+|-=||+|. |. .+..+...|. +|++.|.++
T Consensus 155 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~yd~~~ 189 (416)
T 3k5p_A 155 RGKTLGIVGYGNIGSQVGNLAESLGM-TVRYYDTSD 189 (416)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECTTC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCcc
Confidence 467899999873 32 3344455675 799999764
No 473
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=21.00 E-value=47 Score=29.56 Aligned_cols=81 Identities=15% Similarity=0.091 Sum_probs=42.8
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCCC--CCeeEEEecc-----ccccCChHHH
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFDN--GTFDFEFSNV-----FDHALYPWKF 185 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~d--~SFD~V~s~~-----l~h~~~p~~~ 185 (258)
.+.+|.=||+|. |. .+..++..|. +|++.|.++.........+....+++ ...|+|+..+ ..|+.+
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~---- 223 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLIN---- 223 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTCBC----
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcchhhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHhhC----
Confidence 467899999863 22 2334455675 79999986542100000000001111 2468887741 233333
Q ss_pred HHHHHhcccCCcEEEE
Q 025071 186 VGEIERTLKPAGVCVL 201 (258)
Q Consensus 186 l~Ei~RVLKPGG~lii 201 (258)
+++...+|||..++-
T Consensus 224 -~~~~~~mk~~ailIn 238 (334)
T 2dbq_A 224 -EERLKLMKKTAILIN 238 (334)
T ss_dssp -HHHHHHSCTTCEEEE
T ss_pred -HHHHhcCCCCcEEEE
Confidence 456677899887643
No 474
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=20.94 E-value=29 Score=31.08 Aligned_cols=76 Identities=12% Similarity=0.006 Sum_probs=42.2
Q ss_pred CCCEEEEECCCCCHHHHHH----HhcCCCcEEEEeCCCCCCc------eeeecCCCCCCCCCCeeEEEec-----ccccc
Q 025071 115 NESKALSIGARVGQEVAAL----KLVGVSDSIGIDLVPRPPL------VIKGDFHAQPFDNGTFDFEFSN-----VFDHA 179 (258)
Q Consensus 115 ~~~~VLDIGcGtG~~~~~L----~~~g~~~v~GvD~s~~~~~------~~~aDa~~LPf~d~SFD~V~s~-----~l~h~ 179 (258)
.+.+|.=||+| ..+..+ ...|. +|++.|.++.... +...+.+++ -...|+|+.. ...|+
T Consensus 144 ~g~tvGIIG~G--~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~~l~el---l~~aDvV~l~~P~t~~t~~l 217 (330)
T 4e5n_A 144 DNATVGFLGMG--AIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQVACSEL---FASSDFILLALPLNADTLHL 217 (330)
T ss_dssp TTCEEEEECCS--HHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEECCHHHH---HHHCSEEEECCCCSTTTTTC
T ss_pred CCCEEEEEeeC--HHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCceeCCHHHH---HhhCCEEEEcCCCCHHHHHH
Confidence 46789999987 344333 34565 7999998752211 111111110 1246888774 12333
Q ss_pred CChHHHHHHHHhcccCCcEEEE
Q 025071 180 LYPWKFVGEIERTLKPAGVCVL 201 (258)
Q Consensus 180 ~~p~~~l~Ei~RVLKPGG~lii 201 (258)
.+ ++....+|||.+++=
T Consensus 218 i~-----~~~l~~mk~gailIN 234 (330)
T 4e5n_A 218 VN-----AELLALVRPGALLVN 234 (330)
T ss_dssp BC-----HHHHTTSCTTEEEEE
T ss_pred hC-----HHHHhhCCCCcEEEE
Confidence 32 577788899876654
No 475
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=20.72 E-value=59 Score=28.92 Aligned_cols=80 Identities=13% Similarity=0.132 Sum_probs=42.6
Q ss_pred CCCEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCCCceeeecCCCCCCCC--CCeeEEEec-----cccccCChHHH
Q 025071 115 NESKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRPPLVIKGDFHAQPFDN--GTFDFEFSN-----VFDHALYPWKF 185 (258)
Q Consensus 115 ~~~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~~~~~~aDa~~LPf~d--~SFD~V~s~-----~l~h~~~p~~~ 185 (258)
.+.+|.=||+|. |. .+..+...|. +|++.|.++... . ..-.....+++ ...|+|+.. ...|+.+
T Consensus 145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~-~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~---- 217 (331)
T 1xdw_A 145 RNCTVGVVGLGRIGRVAAQIFHGMGA-TVIGEDVFEIKG-I-EDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVT---- 217 (331)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCS-C-TTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBC----
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCccHH-H-HhccccCCHHHHHhhCCEEEEecCCchHHHHHhC----
Confidence 356899998872 32 2334445675 799999765432 1 00000001111 246888773 1234433
Q ss_pred HHHHHhcccCCcEEEEE
Q 025071 186 VGEIERTLKPAGVCVLH 202 (258)
Q Consensus 186 l~Ei~RVLKPGG~lii~ 202 (258)
++....+|||++++-+
T Consensus 218 -~~~l~~mk~ga~lin~ 233 (331)
T 1xdw_A 218 -RDFLKKMKDGAILVNC 233 (331)
T ss_dssp -HHHHHTSCTTEEEEEC
T ss_pred -HHHHhhCCCCcEEEEC
Confidence 3556678998766543
No 476
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=20.54 E-value=80 Score=24.23 Aligned_cols=31 Identities=23% Similarity=0.121 Sum_probs=23.8
Q ss_pred EEEEECCCCCHHHH--HHHhcCCCcEEEEeCCCC
Q 025071 118 KALSIGARVGQEVA--ALKLVGVSDSIGIDLVPR 149 (258)
Q Consensus 118 ~VLDIGcGtG~~~~--~L~~~g~~~v~GvD~s~~ 149 (258)
.|+=||+|....+. .|++.|. +|+-+|..+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~-~V~v~Ek~~~ 36 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGH-QVHLFDKSRG 36 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-CEEEEECCCC
Confidence 48999999888654 5678887 7888997643
No 477
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=20.54 E-value=88 Score=29.43 Aligned_cols=82 Identities=15% Similarity=0.082 Sum_probs=46.7
Q ss_pred CCCCCCEEEEECCCC-CHH-HHHHHhcCCCcEEEEeCCCCCC------ceeeecCCCCCCCCCCeeEEEec-cccccCCh
Q 025071 112 FLFNESKALSIGARV-GQE-VAALKLVGVSDSIGIDLVPRPP------LVIKGDFHAQPFDNGTFDFEFSN-VFDHALYP 182 (258)
Q Consensus 112 ~l~~~~~VLDIGcGt-G~~-~~~L~~~g~~~v~GvD~s~~~~------~~~~aDa~~LPf~d~SFD~V~s~-~l~h~~~p 182 (258)
....+.+|+-+|+|. |.. +..++..|. +|+++|.++... .+...+.++ .-...|+|+.. .-.|+.+
T Consensus 216 ~~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~v~~Lee---al~~ADIVi~atgt~~lI~- 290 (435)
T 3gvp_A 216 MMFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFRLVKLNE---VIRQVDIVITCTGNKNVVT- 290 (435)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEECCHHH---HTTTCSEEEECSSCSCSBC-
T ss_pred ceecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCEeccHHH---HHhcCCEEEECCCCcccCC-
Confidence 345788999999985 332 334445675 799999864211 011111111 11356888874 2233332
Q ss_pred HHHHHHHHhcccCCcEEEEE
Q 025071 183 WKFVGEIERTLKPAGVCVLH 202 (258)
Q Consensus 183 ~~~l~Ei~RVLKPGG~lii~ 202 (258)
.|..+.+|||++++-.
T Consensus 291 ----~e~l~~MK~gailINv 306 (435)
T 3gvp_A 291 ----REHLDRMKNSCIVCNM 306 (435)
T ss_dssp ----HHHHHHSCTTEEEEEC
T ss_pred ----HHHHHhcCCCcEEEEe
Confidence 4677789999866553
No 478
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=20.29 E-value=38 Score=29.51 Aligned_cols=82 Identities=15% Similarity=0.130 Sum_probs=44.7
Q ss_pred CEEEEECCCC-CH-HHHHHHhcCCCcEEEEeCCCCC--------Cceeeec-C---CCC--CCC-----CCCeeEEEecc
Q 025071 117 SKALSIGARV-GQ-EVAALKLVGVSDSIGIDLVPRP--------PLVIKGD-F---HAQ--PFD-----NGTFDFEFSNV 175 (258)
Q Consensus 117 ~~VLDIGcGt-G~-~~~~L~~~g~~~v~GvD~s~~~--------~~~~~aD-a---~~L--Pf~-----d~SFD~V~s~~ 175 (258)
.+|.=||||. |. .+..|++.|. +|+.+|.++.. ...+.+. . ..+ ... -+..|+|+..+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v 83 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV 83 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeC
Confidence 5799999985 22 3445666775 79999975321 0001000 0 000 001 13579888752
Q ss_pred ccccCChHHHHHHHHhcccCCcEEEE
Q 025071 176 FDHALYPWKFVGEIERTLKPAGVCVL 201 (258)
Q Consensus 176 l~h~~~p~~~l~Ei~RVLKPGG~lii 201 (258)
=.+. -..+++++...++||..++.
T Consensus 84 ~~~~--~~~~~~~l~~~l~~~~~vv~ 107 (359)
T 1bg6_A 84 PAIH--HASIAANIASYISEGQLIIL 107 (359)
T ss_dssp CGGG--HHHHHHHHGGGCCTTCEEEE
T ss_pred CchH--HHHHHHHHHHhCCCCCEEEE
Confidence 2111 14567888888998765544
No 479
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=20.26 E-value=2.6e+02 Score=26.14 Aligned_cols=33 Identities=24% Similarity=0.411 Sum_probs=23.6
Q ss_pred CCEEEEECCCCCHHHHH----HHhcC--CCcEEEEeCCC
Q 025071 116 ESKALSIGARVGQEVAA----LKLVG--VSDSIGIDLVP 148 (258)
Q Consensus 116 ~~~VLDIGcGtG~~~~~----L~~~g--~~~v~GvD~s~ 148 (258)
.-.|+|+|.|+|.++.. +++.+ ..+++-||+|+
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp 176 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSG 176 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTS
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCH
Confidence 46899999999997543 34433 23688899875
Done!