BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025073
(258 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q20390|PPT1_CAEEL Palmitoyl-protein thioesterase 1 OS=Caenorhabditis elegans GN=ppt-1
PE=2 SV=2
Length = 298
Score = 150 bits (380), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 115/201 (57%), Gaps = 4/201 (1%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC-GSGIFCIIA 61
EL GYN +G SQG R V + C PP+KN VS+GG H G P C G I C
Sbjct: 96 ELKNGYNAIGFSQGAQFLRAVAQRCPN-PPMKNLVSVGGQHQGVFGAPYCIGDNIMCNGV 154
Query: 62 NNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSS 121
LI Y +VQ + + Y PN + +Y ++ FL +NNE N TYK S
Sbjct: 155 RRLIDLGAYLPFVQKRVVQAQYWHDPNQVEEYKKRSIFLADINNEN--NNNPTYKRNLLS 212
Query: 122 LQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVH 181
L+NLVL+ F D +++PK+++WFG+Y DG +LP +T LY ED IGLK L ++GR+H
Sbjct: 213 LKNLVLVKFNQDHMVVPKDSSWFGFYKDGDIDTILPMNETDLYKEDRIGLKKLHESGRIH 272
Query: 182 FISVAGGHLKISKADMKKHII 202
F+ V G HL+I ++ + II
Sbjct: 273 FMDVDGDHLQIPRSVLVNDII 293
>sp|Q54CM0|PPT3_DICDI Palmitoyl-protein thioesterase 3 OS=Dictyostelium discoideum
GN=ppt3 PE=3 SV=1
Length = 289
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 113/210 (53%), Gaps = 11/210 (5%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIAN 62
+L+ G+N++G SQG LI R V+ P V N++S GP G P +
Sbjct: 86 KLANGFNLIGFSQGTLIARAFVQRY-NNPQVYNYISWNGPQGGQFGTPFVN----IPWVD 140
Query: 63 NLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSL 122
++ Y +Q L+ + Y K P+ I KYLE+ FL +NNE K N+TYKE + L
Sbjct: 141 KVLGTIPYEKTIQKKLSVAEYWKDPHRIDKYLERSIFLADINNEYQVK-NTTYKENLTKL 199
Query: 123 QNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHF 182
+VL +DK +IPKE+ WF +Y DG+ + V+P Q+ Y+EDW+GL+TLD++ R+ F
Sbjct: 200 NAMVLTYSTNDKTIIPKESGWFSFYADGSGTEVVPLQQQTQYSEDWLGLRTLDESNRLFF 259
Query: 183 ISVAGGHLKISKADMKK-----HIIPYLKD 207
+ H D K +PYL++
Sbjct: 260 YTTTCTHRDHPIEDYCKPYFTNFTLPYLQN 289
>sp|P45479|PPT1_RAT Palmitoyl-protein thioesterase 1 OS=Rattus norvegicus GN=Ppt1 PE=1
SV=1
Length = 306
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 108/206 (52%), Gaps = 5/206 (2%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSGIFCII 60
+L GYN +G SQG R V + C PP+ +S+GG H G +P C S C
Sbjct: 104 KLQHGYNAIGFSQGGQFLRAVAQRCPT-PPMMTLISVGGQHQGVFGLPRCPGESSHICDF 162
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ A YS VQ+ L + Y P Y FL +N E N +YKE
Sbjct: 163 IRKSLNAGAYSKVVQERLVQAQYWHDPIKEEVYRNCSIFLADINQE--RHINESYKENLM 220
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRV 180
+L+ V++ F +D ++ P ++ WFG+Y G +P Q+T LYTED +GLK +D AG++
Sbjct: 221 ALKKFVMVKFFNDSIVDPVDSEWFGFYRSGQAKETIPLQETTLYTEDRLGLKKMDKAGKL 280
Query: 181 HFISVAGGHLKISKADMKKHIIPYLK 206
F++ G HL+ISK HIIP+LK
Sbjct: 281 VFLAKEGDHLQISKEWFTAHIIPFLK 306
>sp|O88531|PPT1_MOUSE Palmitoyl-protein thioesterase 1 OS=Mus musculus GN=Ppt1 PE=2 SV=2
Length = 306
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 109/206 (52%), Gaps = 5/206 (2%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSGIFCII 60
+L +GYN +G SQG R V + C PP+ +S+GG H G +P C S C
Sbjct: 104 KLQQGYNAIGFSQGGQFLRAVAQRCPT-PPMMTLISVGGQHQGVFGLPRCPGESSHICDF 162
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ A YS VQ+ L + Y P Y FL +N E N +YK+
Sbjct: 163 IRKSLNAGAYSKLVQERLVQAQYWHDPIKESVYRNYSIFLADINQE--RCVNESYKKNLM 220
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRV 180
+L+ V++ F +D ++ P ++ WFG+Y G +P Q++ LYTED +GLK +D AG++
Sbjct: 221 ALKKFVMVKFFNDSIVDPVDSEWFGFYRSGQAKETIPLQESTLYTEDRLGLKKMDKAGKL 280
Query: 181 HFISVAGGHLKISKADMKKHIIPYLK 206
F++ G HL+ISK HIIP+LK
Sbjct: 281 VFLAKEGDHLQISKEWFTAHIIPFLK 306
>sp|P50897|PPT1_HUMAN Palmitoyl-protein thioesterase 1 OS=Homo sapiens GN=PPT1 PE=1 SV=1
Length = 306
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 110/205 (53%), Gaps = 5/205 (2%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSGIFCII 60
+L +GYN +G SQG R V + C PP+ N +S+GG H G +P C S C
Sbjct: 104 KLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMINLISVGGQHQGVFGLPRCPGESSHICDF 162
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ A YS VQ+ L + Y P Y FL +N E N +YK+
Sbjct: 163 IRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQE--RGINESYKKNLM 220
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRV 180
+L+ V++ F +D ++ P ++ WFG+Y G +P Q+T LYT+D +GLK +D+AG++
Sbjct: 221 ALKKFVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSLYTQDRLGLKEMDNAGQL 280
Query: 181 HFISVAGGHLKISKADMKKHIIPYL 205
F++ G HL++S+ HIIP+L
Sbjct: 281 VFLATEGDHLQLSEEWFYAHIIPFL 305
>sp|Q8HXW6|PPT1_MACFA Palmitoyl-protein thioesterase 1 OS=Macaca fascicularis GN=PPT1
PE=2 SV=1
Length = 306
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 110/205 (53%), Gaps = 5/205 (2%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSGIFCII 60
+L +GYN +G SQG R V + C PP+ N +S+GG H G +P C S C
Sbjct: 104 KLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMINLISVGGQHQGVFGLPRCPGESSHICDF 162
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ A YS VQ+ L + Y P Y FL +N E N +YK+
Sbjct: 163 IRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQE--RGINESYKKNLM 220
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRV 180
+L+ V++ F +D ++ P ++ WFG+Y G +P Q+T LYT+D +GLK +D+AG++
Sbjct: 221 ALKKFVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSLYTQDRLGLKEMDNAGQL 280
Query: 181 HFISVAGGHLKISKADMKKHIIPYL 205
F++ G HL++S+ HIIP+L
Sbjct: 281 VFLATEGDHLQLSEEWFYAHIIPFL 305
>sp|P45478|PPT1_BOVIN Palmitoyl-protein thioesterase 1 OS=Bos taurus GN=PPT1 PE=1 SV=1
Length = 306
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 5/206 (2%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSGIFCII 60
+L +GYN +G SQG R V + C PP+ N +S+GG H G +P C S C
Sbjct: 104 KLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMVNLISVGGQHQGVFGLPRCPGESSHICDF 162
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ A Y+ +Q+ L + Y P Y FL +N E N +YK+
Sbjct: 163 IRKTLNAGAYNKAIQERLVQAEYWHDPIREDIYRNHSIFLADINQE--RGVNESYKKNLM 220
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRV 180
+L+ V++ F +D ++ P ++ WFG+Y G +P Q++ LYT+D +GLK +D AG++
Sbjct: 221 ALKKFVMVKFLNDTIVDPVDSEWFGFYRSGQAKETIPLQESTLYTQDRLGLKAMDKAGQL 280
Query: 181 HFISVAGGHLKISKADMKKHIIPYLK 206
F+++ G HL++S+ HIIP+L+
Sbjct: 281 VFLALEGDHLQLSEEWFYAHIIPFLE 306
>sp|Q9W3C7|PPT1_DROME Palmitoyl-protein thioesterase 1 OS=Drosophila melanogaster GN=Ppt1
PE=1 SV=2
Length = 314
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 108/209 (51%), Gaps = 7/209 (3%)
Query: 2 KELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIF--CI 59
+ L++GY+ +G SQG R V E C PP++N ++LGG H G +P+C + C
Sbjct: 111 EHLAKGYHAIGFSQGGQFLRAVAERCPN-PPMRNLITLGGQHQGIFGLPMCPTLTEKPCD 169
Query: 60 IANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECF 119
L+ Y+ VQ L + Y P KY FL +NNEL N Y E
Sbjct: 170 YITRLLDNAAYAPEVQKALVQATYWHDPIMENKYRLGSTFLADINNEL--FINKFYIENL 227
Query: 120 SSLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGR 179
L+ V++ F +D ++ PKE+ WF YY G + P ++K+Y + +GL + G+
Sbjct: 228 QKLKKFVMVQFLNDTIVQPKESQWFQYYTTGQNKVIQPFTESKVYQD--LGLDKMHRQGQ 285
Query: 180 VHFISVAGGHLKISKADMKKHIIPYLKDQ 208
+ F+ V G HL ISKA ++I+P L ++
Sbjct: 286 LVFLGVEGDHLAISKAWFIQNIVPLLLEK 314
>sp|O59747|PDF1_SCHPO Palmitoyl-protein thioesterase-dolichyl pyrophosphate phosphatase
fusion 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=pdf1 PE=1 SV=2
Length = 622
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 6/204 (2%)
Query: 4 LSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCG-SGIFC-IIA 61
LS G+ +GLSQG L R + + C+ +++ ++LG PH+G ++P C + + C +
Sbjct: 115 LSNGFYALGLSQGGLFLRALAQTCDAAK-IRSLITLGSPHSGINTIPGCSPTNLICKAVV 173
Query: 62 NNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSS 121
++++ ++ ++Q+H+ + Y + KYLE KFL LNNE+ + E
Sbjct: 174 HSILGLGIWHSWIQNHVVQAQYYRTEKQYDKYLENNKFLTHLNNEVLHDNYTRNIEKLKE 233
Query: 122 LQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVH 181
L NLV + F+ D ++ P + FG+ + + + LY +GLK L + G++
Sbjct: 234 LDNLVAVSFERDDIVEPPYSTGFGWINETT-GENIEMEDFVLYES--LGLKDLVNQGKLE 290
Query: 182 FISVAGGHLKISKADMKKHIIPYL 205
IS G HL++ D ++ Y
Sbjct: 291 TISFPGRHLQMRWGDFDALVLKYF 314
>sp|Q6GNY7|PPT2B_XENLA Lysosomal thioesterase PPT2-B OS=Xenopus laevis GN=ppt2-b PE=2 SV=1
Length = 288
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 96/182 (52%), Gaps = 4/182 (2%)
Query: 6 EGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLI 65
+G +++ SQG LI RG++E V F++L P G + L ++ + +
Sbjct: 89 KGVHLICYSQGGLICRGLLETMPEHN-VDTFIALSSPLMGQYGMTLYVQKALPLVNISAL 147
Query: 66 KAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNL 125
+ Y + ++ ++ GY + P+ KYLE FLPKLNNEL D ++ K F L+ L
Sbjct: 148 QEVCYRKFFKE-ISICGYWRDPHRYEKYLEYSAFLPKLNNELLDSNSTERKRNFLRLRKL 206
Query: 126 VLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISV 185
VLI DD+V+ P +++ FG+Y + V+ + +Y +D GL++LD G + SV
Sbjct: 207 VLIGGPDDEVIAPWQSSHFGFYNEK--EEVVNMKDQMVYQKDTFGLQSLDGRGAITIYSV 264
Query: 186 AG 187
G
Sbjct: 265 PG 266
>sp|Q9VKH6|PPT2_DROME Lysosomal thioesterase PPT2 homolog OS=Drosophila melanogaster
GN=Ppt2 PE=2 SV=1
Length = 288
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 18/208 (8%)
Query: 6 EGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLI 65
EG ++G SQG L+ R ++ VK F+SL P AG G+ +I +L
Sbjct: 90 EGIIVLGYSQGGLLARAAIQSLPEHN-VKTFISLSSPQAGQ-----YGTSFLHLIFPDLA 143
Query: 66 KA---EVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSL 122
E++ V H + GY P YL+ +FLP +NNE ++++K L
Sbjct: 144 AKTAFELFYSRVGQHTSVGGYWNDPQRQDLYLKYSEFLPLINNEKKTSNSTSFKMGMVRL 203
Query: 123 QNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHF 182
LV+I +D V+ P +++ FGY+ + V+P + ++T D IG++TL +AG++
Sbjct: 204 NKLVMIGGPNDDVITPWQSSHFGYFDENM--DVIPFIRRPIFTSDSIGIRTLQEAGKL-- 259
Query: 183 ISVAGGHLKISKADMKKHII-----PYL 205
I V H+ ++ +I PYL
Sbjct: 260 IIVVKPHVHHLAWHTRRDVIHEVIFPYL 287
>sp|O35448|PPT2_MOUSE Lysosomal thioesterase PPT2 OS=Mus musculus GN=Ppt2 PE=2 SV=1
Length = 302
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
Query: 1 MKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCII 60
M++ EG +++ SQG L+ R ++ + V +F+SL P G +F
Sbjct: 98 MEKAPEGVHLICYSQGGLVCRALLSVMDNHN-VDSFISLSSPQMGQYGDTDYLKWLFPTS 156
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ + YS + Q+ + Y P+ YL FL +N E + +++ F
Sbjct: 157 MRSNLYRVCYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATAWRKNFL 215
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRV 180
+ LVLI DD V+ P ++++FG+Y A VL ++ +Y D GLKTL G +
Sbjct: 216 RVGRLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEEQPVYLRDSFGLKTLLARGAI 273
Query: 181 HFISVAG 187
+AG
Sbjct: 274 VRCPMAG 280
>sp|Q1JQA0|PPT2_BOVIN Lysosomal thioesterase PPT2 OS=Bos taurus GN=PPT2 PE=2 SV=1
Length = 305
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 4/187 (2%)
Query: 1 MKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCII 60
M + +G +++ SQG L+ R ++ + V +F+SL P G +F
Sbjct: 101 MAKALQGVHLICYSQGGLVCRALLSVMDEHN-VDSFISLSSPQMGQYGDTNYLKWLFPTS 159
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ + YS + Q+ + Y P+ YL FL +N E + +++ F
Sbjct: 160 MRSNLYRICYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATAWRKNFL 218
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRV 180
L LVLI DD V+ P ++++FG+Y A VL +K +Y D GLKTL G +
Sbjct: 219 RLGRLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEKQLVYLRDSFGLKTLLARGAI 276
Query: 181 HFISVAG 187
+AG
Sbjct: 277 VRCPMAG 283
>sp|O70489|PPT2_RAT Lysosomal thioesterase PPT2 OS=Rattus norvegicus GN=Ppt2 PE=2 SV=1
Length = 302
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
Query: 1 MKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCII 60
M++ EG +++ SQG L+ R ++ + V +F+SL P G +F
Sbjct: 98 MEKAPEGVHLICYSQGGLVCRALLSVMDEHN-VDSFISLSSPQMGQYGDTDYLKWLFPTS 156
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ + YS + Q+ + Y P+ YL FL +N E + +++ F
Sbjct: 157 MRSNLYRICYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATAWRKNFL 215
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRV 180
+ LVLI DD V+ P ++++FG+Y A VL ++ +Y D GLKTL G +
Sbjct: 216 RVGRLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEEQPVYLRDSFGLKTLLARGAI 273
Query: 181 HFISVAG 187
+AG
Sbjct: 274 VRCPMAG 280
>sp|Q6PCJ9|PPT2A_XENLA Lysosomal thioesterase PPT2-A OS=Xenopus laevis GN=ppt2-a PE=2 SV=1
Length = 296
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 6 EGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLI 65
+G +++ SQG LI RG+++ V F+SL P G +F + +
Sbjct: 97 DGVHLLCYSQGGLICRGLLQTMPDHN-VDTFISLSSPQMGQYGDTDYLRYLFPTYVKSNL 155
Query: 66 KAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNL 125
Y+ Q + + P+ Y+ FL LN+E P+ + +K+ F L+ +
Sbjct: 156 YRLCYTQMGQT-FSICNFWNDPHHHGIYVNVSDFLAPLNSERPEPNATDWKKNFLRLRKM 214
Query: 126 VLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISV 185
VLI DD V+ P E++ FG+Y + VL + +Y +D GL+++D G + V
Sbjct: 215 VLIGGPDDGVITPWESSHFGFYDEN--ETVLEMKYQMVYQDDTFGLRSMDYRGAITVYGV 272
Query: 186 AG 187
G
Sbjct: 273 PG 274
>sp|Q9UMR5|PPT2_HUMAN Lysosomal thioesterase PPT2 OS=Homo sapiens GN=PPT2 PE=1 SV=4
Length = 302
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
Query: 1 MKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCII 60
M + +G +++ SQG L+ R ++ + V +F+SL P G +F
Sbjct: 98 MAKAPQGVHLICYSQGGLVCRALLSVMDDHN-VDSFISLSSPQMGQYGDTDYLKWLFPTS 156
Query: 61 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 120
+ + YS + Q+ + Y P+ YL FL +N E + +++ F
Sbjct: 157 MRSNLYRICYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFL 215
Query: 121 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRV 180
+ +LVLI DD V+ P ++++FG+Y A VL ++ +Y D GLKTL G +
Sbjct: 216 RVGHLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEEQLVYLRDSFGLKTLLARGAI 273
Query: 181 HFISVAG 187
+AG
Sbjct: 274 VRCPMAG 280
>sp|Q09371|YS42_CAEEL Uncharacterized protein ZK177.2 OS=Caenorhabditis elegans
GN=ZK177.2 PE=4 SV=1
Length = 296
Score = 34.7 bits (78), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 21/113 (18%)
Query: 107 LPDKRNSTYKECFSSLQNLVLIM-FKDDKV-------------LIPKETAWFGYYPDGAF 152
L D R S Y+ C + + LVL M +DK+ + P W Y DG
Sbjct: 153 LADWRTSDYRRCITIMAQLVLAMRIANDKMKFVHGDIYMMNILIAPTTKRWIEYNIDGKT 212
Query: 153 SPV----LPPQKTKLYTEDWIGLK-TLDDAGRVHFISVAGGH-LKISKADMKK 199
+ + PQ +++ W G D R+H ++ GH L SK D KK
Sbjct: 213 ITIQTFGIIPQLID-FSKSWCGADPERHDISRLHTVAKRVGHSLNGSKRDKKK 264
>sp|P28824|NRP1_XENLA Neuropilin-1 OS=Xenopus laevis GN=nrp1 PE=2 SV=1
Length = 928
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 155 VLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGHLKISKADMKKHIIPYLKDQASVRVI 214
LPP T YT++W+ + L + V + + GG K +K M+K I Y + +I
Sbjct: 472 ALPPSNTHPYTKEWLQID-LAEEKIVRGVIIQGGKHKENKVFMRKFKIGYSNNGTEWEMI 530
Query: 215 ESRKTKGPNEEEGST 229
P EG+T
Sbjct: 531 MDSSKNKPKTFEGNT 545
>sp|A1KVS6|AROE_NEIMF Shikimate dehydrogenase OS=Neisseria meningitidis serogroup C /
serotype 2a (strain ATCC 700532 / FAM18) GN=aroE PE=3
SV=1
Length = 269
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 150 GAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGH-LKISKADMKKHIIPYLKDQ 208
GA + ++P + KL ++ G+ +D +V I++ G L + + +IP LK+
Sbjct: 86 GAVNTLIPLKNGKLRGDNTDGIGLTNDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEH 145
Query: 209 ASVRVIESRKTKGPNEE 225
R++ + +T+ EE
Sbjct: 146 RPARIVIANRTRAKAEE 162
>sp|P56992|AROE_NEIMB Shikimate dehydrogenase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=aroE PE=3 SV=1
Length = 269
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 150 GAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGH-LKISKADMKKHIIPYLKDQ 208
GA + ++P + KL ++ G+ +D +V I++ G L + + +IP LK+
Sbjct: 86 GAVNTLIPLKNGKLRGDNTDGIGLTNDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEH 145
Query: 209 ASVRVIESRKTKGPNEE 225
R++ + +T+ EE
Sbjct: 146 RPARIVIANRTRAKAEE 162
>sp|B2VG22|MUTS_ERWT9 DNA mismatch repair protein MutS OS=Erwinia tasmaniensis (strain
DSM 17950 / Et1/99) GN=mutS PE=3 SV=1
Length = 853
Score = 33.5 bits (75), Expect = 1.7, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 28/141 (19%)
Query: 87 PNDIPKYLEKCKFLPKLNNELPDKRNSTYKEC------FSSLQNLVL--------IMFKD 132
P D+ + + LP+LNNEL D N+ + F+ L+ L+ ++ +D
Sbjct: 364 PRDLARMRHAFQQLPQLNNELADSDNAHLQTLRSQMGEFTELRELLEHAIVETPPVLVRD 423
Query: 133 DKVLIP---KETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGH 189
V+ P +E + DGA + + ++ + +GL TL +V F V G +
Sbjct: 424 GGVIAPGYNQELDEWRALADGATDYL---DRLEIREREKLGLDTL----KVGFNGVHGYY 476
Query: 190 LKISKADMKKHIIP--YLKDQ 208
+++S+ + H++P Y++ Q
Sbjct: 477 IQVSRG--QSHLVPIHYVRRQ 495
>sp|P35409|GLHR_ANTEL Probable glycoprotein hormone G-protein coupled receptor
OS=Anthopleura elegantissima PE=2 SV=1
Length = 925
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 77 HLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNL 125
H++ SG + P+DI ++LEK K+L NN++ + K +SSL L
Sbjct: 66 HVSFSGEISIPSDILQHLEKLKYLTLNNNKIKNIAKFRVKNGYSSLITL 114
>sp|O31929|YOPI_BACSU SPBc2 prophage-derived uncharacterized protein YopI OS=Bacillus
subtilis (strain 168) GN=yopI PE=4 SV=1
Length = 177
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 19/72 (26%)
Query: 89 DIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNLVLIMFKDDKVLIPKETAWFGYYP 148
+IPK L + KF CF NL++ + DDK +E A FGYY
Sbjct: 82 EIPKVLREIKF------------------CFYKNTNLIVSVTPDDKAT-TEEFAEFGYYR 122
Query: 149 DGAFSPVLPPQK 160
D F+ LP ++
Sbjct: 123 DKLFNINLPSKQ 134
>sp|A4W5X6|F16PA_ENT38 Fructose-1,6-bisphosphatase class 1 OS=Enterobacter sp. (strain
638) GN=fbp PE=3 SV=1
Length = 332
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 15/110 (13%)
Query: 41 GPHAGTASVPLCGSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFL 100
G HA T L G+FC+ + E S Y + Y+KFPN + KY++ C+
Sbjct: 174 GVHAFTYDPSL---GVFCLCQERMRYPEKGSTY---SINEGNYIKFPNGVKKYIKFCQ-- 225
Query: 101 PKLNNELPDKRNSTYKECFSSLQNLVLIMFKDDKVLIPKETAWFGYYPDG 150
+ P +R T + S + + + K L P + +PDG
Sbjct: 226 ---EEDTPTQRPYTSRYIGSLVADFHRNLLKGGIYLYPSTAS----HPDG 268
>sp|Q9LRQ7|BAHD2_ARATH BAHD acyltransferase At3g29680 OS=Arabidopsis thaliana GN=At3g29680
PE=2 SV=1
Length = 451
Score = 32.0 bits (71), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 181 HFISVAGGHLKISKADMKKHIIPYLKDQASVRVIES 216
HF+ ++G HLK + D K HI+ + KD S+ V+ES
Sbjct: 72 HFLPLSG-HLKWNPQDPKPHIVIFPKDTVSLTVVES 106
>sp|Q3SGC3|RIMM_THIDA Ribosome maturation factor RimM OS=Thiobacillus denitrificans
(strain ATCC 25259) GN=rimM PE=3 SV=1
Length = 189
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 151 AFSPVLPPQKTKLYTEDWIGLKTLD----DAGRVHFISVAGGHLKISKADMKKHIIPYL 205
A S + PP++ + Y D IGL ++ + G+V + +G H + ++H+IP++
Sbjct: 109 AKSALPPPEENEFYWSDLIGLTVMNREGVELGKVDSLMESGAHDLLVVKGRREHLIPFV 167
>sp|Q3A1R3|SYI_PELCD Isoleucine--tRNA ligase OS=Pelobacter carbinolicus (strain DSM 2380
/ Gra Bd 1) GN=ileS PE=3 SV=1
Length = 927
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Query: 33 VKNFVSLGGPHAGTASVPLCGSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPND 89
+ FV GG G + C S C+ A L +AEV +Y DH +PS Y+KFP D
Sbjct: 168 LARFVEKGGLFKGKKPIHWCSS---CVTA--LAEAEV--EYA-DHKSPSIYVKFPFD 216
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.138 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,016,705
Number of Sequences: 539616
Number of extensions: 4774158
Number of successful extensions: 9952
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 9895
Number of HSP's gapped (non-prelim): 64
length of query: 258
length of database: 191,569,459
effective HSP length: 115
effective length of query: 143
effective length of database: 129,513,619
effective search space: 18520447517
effective search space used: 18520447517
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)