BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025074
(258 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZIP6|OTU6B_CHICK OTU domain-containing protein 6B OS=Gallus gallus GN=OTUD6B PE=2
SV=1
Length = 302
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 148/287 (51%), Gaps = 46/287 (16%)
Query: 1 MLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASL 60
++ R R+E +LQ K +K A K K ++KQ+ EE+++L A+L +KH +EL L
Sbjct: 18 LVKRQRREKRELQAKIQGMKNAVPKNDKK----RRKQLAEEVAKLEAELEQKHKEELKQL 73
Query: 61 GYSSSNGNEKSNLDNLVKAVAGVTVISQHDQ---AKPSKGTKRREKRAQQE-AAREQRIQ 116
+ E++ +D++ VA + + Q + SK KRREK+A E E+ +
Sbjct: 74 KEAMP---EQNKIDSIADGVANFELEGREQQIQHPRISKAQKRREKKAALEKEREERIAE 130
Query: 117 EEQSNIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLA--HLSGGEESAQS 174
E N+ R +E +KL L L + I DGHC+YRA+EDQL H S + ++
Sbjct: 131 AEIENLTGARHLESQKLASLLAARHLEIKQIPSDGHCMYRAIEDQLKDHHNSWTVATLRN 190
Query: 175 QV--------------------------ERFENYCKEVESTAAWGGELELRALTHCLRKH 208
Q E FE YC ++ +TAAWGG+LELRAL+H L+
Sbjct: 191 QTAKYIHSHFDDFLPFLTNPNTGDMYSKEEFEKYCDDIANTAAWGGQLELRALSHILQTP 250
Query: 209 IMIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSV 255
I + P + +G+EY SG IIL Y RHA+GLGEHYNSV
Sbjct: 251 IEVVQMDSPSIIVGEEY-------SGKPIILVYMRHAYGLGEHYNSV 290
>sp|Q7ZV00|OTU6B_DANRE OTU domain-containing protein 6B OS=Danio rerio GN=otud6b PE=2 SV=1
Length = 293
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/290 (36%), Positives = 146/290 (50%), Gaps = 54/290 (18%)
Query: 4 RHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASLGYS 63
+HRKE LQ K +K A K K ++KQ+ E+I++L A+L +KH EL S
Sbjct: 14 QHRKEKKDLQAKIQSMKNAVPKNDKK----RRKQLTEDIAKLEAELSQKHENELKLQNTS 69
Query: 64 SSNGNEKSNLDNLVKAVAGVTVISQHDQAKPSK------GTKRREKRAQQEAAREQRIQE 117
S ++ + A+ ++V + +Q+ PSK KRR+K+A E RE RI E
Sbjct: 70 S--------VEEVSDALDSMSVANHEEQSDPSKQSRTSKAQKRRDKKAALEKEREMRIAE 121
Query: 118 -EQSNIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAH--LSGG-----E 169
E N+ R E KL +KL L + +I DGHC+YRAVE QL L+ G +
Sbjct: 122 AEVENLSGSRHQEGLKLREKLVERHLQIKEISSDGHCMYRAVEHQLTERGLALGLKELRD 181
Query: 170 ESAQSQ---------------------VERFENYCKEVESTAAWGGELELRALTHCLRKH 208
++AQ E FE YC +V TAAWGG+LEL+AL+ L+
Sbjct: 182 QTAQYMRSHADDFMPFLTNPNTGDMYTAEEFEKYCSDVADTAAWGGQLELKALSQVLQLP 241
Query: 209 IMIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIPI 258
I + P + +G+EY I L Y RHA+GLGEHYNSV P+
Sbjct: 242 IEVIQADSPCITIGEEYDK-------PKITLIYMRHAYGLGEHYNSVEPL 284
>sp|Q8N6M0|OTU6B_HUMAN OTU domain-containing protein 6B OS=Homo sapiens GN=OTUD6B PE=1
SV=1
Length = 293
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 149/281 (53%), Gaps = 46/281 (16%)
Query: 4 RHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASLGYS 63
RHRKE +LQ K +K A K K ++KQ+ E++++L ++ +KH +EL L +
Sbjct: 18 RHRKEKKELQAKIQGMKNAVPKNDKK----RRKQLTEDVAKLEKEMEQKHREELEQLKLT 73
Query: 64 SSNGNEKSNLDNLVKAVAGVTVISQHDQAKPSKGTKRREKRAQQE-AAREQRIQEEQSNI 122
+ +++ +D++ AV ++ ++ + SK KRREK+A E E+ + E N+
Sbjct: 74 T----KENKIDSV--AVNISNLVLENQPPRISKAQKRREKKAALEKEREERIAEAEIENL 127
Query: 123 VSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQL----------AHLSGGEESA 172
R +E EKL + L L + I DGHC+Y+A+EDQL A S E
Sbjct: 128 TGARHMESEKLAQILAARQLEIKQIPSDGHCMYKAIEDQLKEKDCALTVVALRSQTAEYM 187
Query: 173 QSQVE------------------RFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSG 214
QS VE F+ YC+++ +TAAWGG+LELRAL+H L+ I I
Sbjct: 188 QSHVEDFLPFLTNPNTGDMYTPEEFQKYCEDIVNTAAWGGQLELRALSHILQTPIEIIQA 247
Query: 215 SFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSV 255
P + +G+EYS +IL Y RHA+GLGEHYNSV
Sbjct: 248 DSPPIIVGEEYSK-------KPLILVYMRHAYGLGEHYNSV 281
>sp|Q6GM06|OTU6B_XENLA OTU domain-containing protein 6B OS=Xenopus laevis GN=otud6b PE=2
SV=1
Length = 294
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 148/287 (51%), Gaps = 47/287 (16%)
Query: 1 MLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASL 60
++ + RKE ++Q K +K + K K ++KQ+ E+I++L A++ +H +EL +L
Sbjct: 13 LIKQQRKEKKEVQAKIQCMKNSVPKNDKK----RRKQMTEDIAKLEAEVEARHKEELEAL 68
Query: 61 GYSSSNGNEKSNLDNLVKAVAGVTVISQHDQAKP--SKGTKRREKRAQQEAAREQRIQE- 117
+ + S++ N V + + S+ +P SK KRREK+A QE R+ RI E
Sbjct: 69 AQKPTEPTQVSSITN---GVTSLDLGSEEPVQQPRVSKAQKRREKKAAQEKERDDRIAEA 125
Query: 118 EQSNIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVE------------------ 159
E +N+ R +E +KL + L L + I DGHC+YRA+E
Sbjct: 126 EIANLSGARHLESQKLAQILAERELQIRQIPSDGHCMYRAIEHQLNEQGNSLTVANLRSQ 185
Query: 160 ----------DQLAHLSGGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHI 209
D L L+ E F+ YC ++ +T AWGG+LELRAL+H L+ I
Sbjct: 186 TADYMQKRAEDFLPFLTNSSTGDMYTQEEFQKYCTDIVNTPAWGGQLELRALSHILKTPI 245
Query: 210 -MIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSV 255
+I + S P V +G+EYSN I L Y RHA+GLGEHYNSV
Sbjct: 246 EVIQAESLPIV-IGEEYSN-------KPITLVYMRHAYGLGEHYNSV 284
>sp|Q5M8L0|OTU6B_XENTR OTU domain-containing protein 6B OS=Xenopus tropicalis GN=otud6b
PE=2 SV=1
Length = 294
Score = 144 bits (362), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 142/289 (49%), Gaps = 51/289 (17%)
Query: 1 MLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASL 60
++ +HRKE LQ K +K + K K ++KQ+ E+I++L A L +H +EL +
Sbjct: 13 LIKQHRKEKRDLQAKIQSMKNSVPKNDKK----RRKQLTEDIAKLEADLDVRHKEELEAF 68
Query: 61 GYSSSNGNEKSNLDNLVKAVAGVTVISQHDQA-----KPSKGTKRREKRAQQEAAREQRI 115
+ S + N GVT + ++A + SK KRREK+A QE R++RI
Sbjct: 69 AQKQPEPTQVSGITN------GVTSLDLGNEAPVQQPRQSKAQKRREKKAAQEKERDERI 122
Query: 116 QE-EQSNIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVE--------------- 159
E E +N+ R +E +KL + L L + I DGHC+YRA+E
Sbjct: 123 AEAEIANLSGARHLESQKLARILAERELQIRQIPSDGHCMYRAIEHQLRERGNDLTVANL 182
Query: 160 -------------DQLAHLSGGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLR 206
D L L+ E F YC ++ +T AWGG+LELRAL+H L+
Sbjct: 183 RSQTADYMQNHAEDFLPFLTNSSTGDMYTQEEFLKYCTDIVNTPAWGGQLELRALSHILK 242
Query: 207 KHIMIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSV 255
I + + +G+EYS+ +I L Y RHA+GLGEHYNSV
Sbjct: 243 TAIEVIQAESSPIVIGEEYSS-------KAITLVYMRHAYGLGEHYNSV 284
>sp|Q8K2H2|OTU6B_MOUSE OTU domain-containing protein 6B OS=Mus musculus GN=Otud6b PE=2
SV=1
Length = 294
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 141/284 (49%), Gaps = 45/284 (15%)
Query: 1 MLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASL 60
++ RHRKE +LQ K +K A K K ++KQ+ E++++L ++ +KH +EL L
Sbjct: 15 LVRRHRKEKKELQAKIQGMKNAVPKNDKK----RRKQLTEDVAKLEREMEQKHREELEQL 70
Query: 61 GYSSSNGNEKSNLDNLVKAVAGVTVISQHDQAKPSKGTKRREKRAQQE-AAREQRIQEEQ 119
+ S +D++ AV ++ ++ + SK KRREK+A E E+ + E
Sbjct: 71 KQLTFKD---SKIDSV--AVNISNLVLENQPPRISKAQKRREKKAALEKEREERIAEAEI 125
Query: 120 SNIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQL----------------- 162
N+ R +E EKL + L L + I DGHC+Y A+EDQL
Sbjct: 126 ENLSGARHLESEKLAQILAARELEIKQIPSDGHCMYGALEDQLREQDCALTVASLRRQTA 185
Query: 163 -----------AHLSGGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMI 211
L+ E F YC ++ +TAAWGG+LELRAL+H L+ I I
Sbjct: 186 EYMQTHSDDFLPFLTNPSTGDMYTPEEFGKYCDDIVNTAAWGGQLELRALSHILQTPIEI 245
Query: 212 YSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSV 255
P + +G+EY + ++L Y RHA+GLGEHYNSV
Sbjct: 246 LQADAPPIIVGEEYPR-------NPLVLVYMRHAYGLGEHYNSV 282
>sp|Q6IE21|OTU6A_MOUSE OTU domain-containing protein 6A OS=Mus musculus GN=Otud6a PE=2
SV=1
Length = 290
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 143/285 (50%), Gaps = 46/285 (16%)
Query: 1 MLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASL 60
++ RH +E +LQ LK + K K ++KQ+ +ISRL A++ ++H +EL
Sbjct: 11 VIRRHYREKRELQAHIQTLKASVPKNDKG----RRKQMLADISRLEAEMEQRHKQELEKF 66
Query: 61 GYSSSNGNEKSNLDNLVKAVAGVTVISQHDQAKPSKGTKRREKRAQQEAAREQRIQEEQS 120
G N S++D++ + + + ++ +P K KRR++RA QE ++R+ Q+
Sbjct: 67 G-----ENPDSSVDSVTADLEKMNL--ENMPPRPPKAQKRRDRRAHQERRHQERMPAAQA 119
Query: 121 -NIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGEESAQSQV--- 176
+ ++R E+EK+ LG L + I DGHC+YRA++DQL S ES + +
Sbjct: 120 EQLAANRREEEEKVAAILGAKNLEMKTIPADGHCMYRAIQDQLV-FSVTIESLRYRTAYY 178
Query: 177 -----------------------ERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYS 213
E F YC ++ A+WGG+LELRAL+H L+ I +
Sbjct: 179 MRKHIDDFLPFFTEPEAGNFYTREDFLRYCDDIVHNASWGGQLELRALSHVLQTPIEVVQ 238
Query: 214 GSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIPI 258
+ P + +G+EY+ + L Y +A GEHYNSV PI
Sbjct: 239 ANSPTIVIGEEYTR-------KPVTLVYLHYACDFGEHYNSVKPI 276
>sp|Q7L8S5|OTU6A_HUMAN OTU domain-containing protein 6A OS=Homo sapiens GN=OTUD6A PE=2
SV=1
Length = 288
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 143/288 (49%), Gaps = 53/288 (18%)
Query: 1 MLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASL 60
+L RH++E +LQ + LK + K K K+KQ+ ++++R+ A++ +KH +EL
Sbjct: 11 ILRRHQRERQELQAQIRSLKNSVPKTDKT----KRKQLLQDVARMEAEMAQKHRQELEKF 66
Query: 61 GYSSSNGNEKSNLDNLVKAVAGVTVISQHDQAKPSKGTKRREKRAQQEAAREQR----IQ 116
+ S+++++V+ +A + + + +P + +K KR + E+ +R Q
Sbjct: 67 -------QDDSSIESVVEDLAKMNL-----ENRPPRSSKAHRKRERMESEERERQESIFQ 114
Query: 117 EEQS-NIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAH----------- 164
E S ++ + E+EKL LG GL + I DGHC+YRA++DQL
Sbjct: 115 AEMSEHLAGFKREEEEKLAAILGARGLEMKAIPADGHCMYRAIQDQLVFSVSVEMLRCRT 174
Query: 165 --------------LSGGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIM 210
S E S + F YC + T AWGG+LELRAL+H L+ I
Sbjct: 175 ASYMKKHVDEFLPFFSNPETSDSFGYDDFMIYCDNIVRTTAWGGQLELRALSHVLKTPIE 234
Query: 211 IYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIPI 258
+ P + +G+EY IIL Y R+A+ LGEHYNSV P+
Sbjct: 235 VIQADSPTLIIGEEYVK-------KPIILVYLRYAYSLGEHYNSVTPL 275
>sp|Q9UUK3|OTU2_SCHPO Ubiquitin thioesterase otu2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=otu2 PE=4 SV=1
Length = 324
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 147/302 (48%), Gaps = 55/302 (18%)
Query: 1 MLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASL 60
+LS+ R+E +LQ+K T L+K +G+K +++A ++++IS++ A L +KHA E L
Sbjct: 28 LLSKQREECKELQSKITNLRKQLKEGNKKQKRA----LQQKISQMEADLSQKHATERQKL 83
Query: 61 GYSSSNGNEKSN---LDNLVKAVAGVTVIS-------------QHDQAKPSKGTKRREKR 104
NE L+ L++ + + + ++ +P K R+++R
Sbjct: 84 DKGDEETNETQQEDLLNTLLQQMEDTKITTAEKSSVQSSLNTKENTPQQPKKSRNRQKER 143
Query: 105 AQQEAAREQRIQEE---QSNIVSD-RTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVED 160
++ A +++ E+ +S ++D + E +K K L GL DI DG+CL+ ++
Sbjct: 144 LERRKAEMKKMSEQAELESEKMADLKNEEKKKFSKILEEAGLVAVDIPADGNCLFASISH 203
Query: 161 QLAHLSGGEESAQS-----------QVERFE---------------NYCKEVESTAAWGG 194
QL + + ++Q+ E+FE +YC E+ + + WG
Sbjct: 204 QLNYHHNVKLNSQALRNKSADYVLKHCEQFEGFLLDEESGEVLPVSDYCNEIRNNSKWGS 263
Query: 195 ELELRALTHCLRKHIMIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNS 254
++E++AL + L + +Y+ P ++ N + + ++Y++H FGLG HYNS
Sbjct: 264 DIEIQALANSLEVPVHVYNTEGPVLKF-----NPSTVKFEKPLCIAYYQHLFGLGAHYNS 318
Query: 255 VI 256
++
Sbjct: 319 LL 320
>sp|P38747|OTU2_YEAST OTU domain-containing protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=OTU2 PE=1 SV=1
Length = 307
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 133/303 (43%), Gaps = 62/303 (20%)
Query: 1 MLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASL 60
+L+RHRKE LQNK T +KK A K+K+K+V + L KL+ K E+
Sbjct: 16 ILARHRKENKDLQNKITGMKKQAT-------KSKRKEVNSKCLDLQDKLKTKQENEIRDW 68
Query: 61 GYSSSNGNEKSNLDNLV--KAVAGVTV-------ISQHDQAKPSKGTKRREKRAQQEAAR 111
+++ + D + K + +++ + Q + TK+R R ++ A+
Sbjct: 69 KIANNEVFDAEQEDEVTPEKLLEQLSISRDEKEQQNVPVQQQQQGQTKKRRNRQKERLAK 128
Query: 112 EQ----RIQEEQSNIVSD----RTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLA 163
+++EE + S + +E E +++ L DI+PDGHCL+ ++ DQL
Sbjct: 129 RDAAIAKMKEEAALEASKQPDLKKMEQESIDQLCELKKLKQFDIQPDGHCLFASILDQLK 188
Query: 164 HLSGGEESAQS-------------------------------QVERFENYCKEVESTAAW 192
++ Q +++ + Y KE+E TA W
Sbjct: 189 LRHDPKKLDQDMDVMKLRWLSCNYVQEHRDDFIPYLFDEETMKMKDIDEYTKEMEHTAQW 248
Query: 193 GGELELRALTHCLRKHIMIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHY 252
GGE+E+ AL+H I I P + Y+ G + L Y++H++ LGEHY
Sbjct: 249 GGEIEILALSHVFDCPISILMSGRP----IQVYNECG---KNPELKLVYYKHSYALGEHY 301
Query: 253 NSV 255
NS+
Sbjct: 302 NSL 304
>sp|Q01804|OTUD4_HUMAN OTU domain-containing protein 4 OS=Homo sapiens GN=OTUD4 PE=1 SV=3
Length = 1113
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 65/150 (43%), Gaps = 31/150 (20%)
Query: 125 DRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAH---------------LSGGE 169
D T D L K LGL + DG CL+RAV +Q+ H L
Sbjct: 21 DATPMDAYLRK----LGLYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIHYLRENR 76
Query: 170 ESAQSQVE-RFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYSNG 228
E ++ +E FE Y K +E+ W G++E+ AL+ RK +IY P+V + N
Sbjct: 77 EKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYRKDFIIYRE--PNVSPSQVTENN 134
Query: 229 GSDSSGSSIILSYHRHAFGLGEHYNSVIPI 258
+ ++L F G HY+ V PI
Sbjct: 135 FPE----KVLL-----CFSNGNHYDIVYPI 155
>sp|B2RRE7|OTUD4_MOUSE OTU domain-containing protein 4 OS=Mus musculus GN=Otud4 PE=1 SV=1
Length = 1107
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 123 VSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAH---------------LSG 167
+ D T D L K LGL + DG CL+RAV +Q+ H L
Sbjct: 19 LEDETPMDAYLRK----LGLYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIRYLRE 74
Query: 168 GEESAQSQVE-RFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYS 226
E ++ +E FE Y K +E+ W G++E+ AL+ RK +IY P+V
Sbjct: 75 NREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYRKDFVIYQE--PNVSPSHVTE 132
Query: 227 NGGSDSSGSSIILSYHRHAFGLGEHYNSVIPI 258
N + ++L F G HY+ V PI
Sbjct: 133 NNFPE----KVLL-----CFSNGNHYDIVYPI 155
>sp|Q9D8C3|ALG13_MOUSE UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Mus
musculus GN=Alg13 PE=2 SV=2
Length = 1166
Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 27/146 (18%)
Query: 126 RTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAH---------------LSGGEE 170
+++ + +++ LG LGL + D CL+RA+ +QL H + ++
Sbjct: 209 KSLNEASMDEYLGSLGLFRKVVAKDASCLFRAISEQLFHSQIHHLQIRRACVSYMKENQQ 268
Query: 171 SAQSQVE-RFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYSNGG 229
+ +S VE FE Y + + G+LEL+AL+ + +IY +P + NG
Sbjct: 269 AFESYVEGSFEKYLERLGDPKESAGQLELKALSLIYNRDFIIY--RYPGKPPTQVTDNGF 326
Query: 230 SDSSGSSIILSYHRHAFGLGEHYNSV 255
D IIL Y + HY+SV
Sbjct: 327 ED----KIILCYSNNG-----HYDSV 343
>sp|Q7RTX8|HIN1L_HUMAN Putative HIN1-like protein OS=Homo sapiens GN=HIN1L PE=5 SV=1
Length = 443
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 31/150 (20%)
Query: 125 DRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAH---------------LSGGE 169
D T D L K LGL + DG CL+RAV +Q+ H L
Sbjct: 21 DATPMDAYLRK----LGLYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIHCLRENR 76
Query: 170 ESAQSQVE-RFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYSNG 228
E ++ + FE Y K +E+ W G++E+ AL+ RK + ++E S
Sbjct: 77 EKFEAIIGGSFEGYLKRLENPQEWVGQMEISALSLMYRKDFIT------NLEPNVSPSQV 130
Query: 229 GSDSSGSSIILSYHRHAFGLGEHYNSVIPI 258
++ ++L F G HY+ V P+
Sbjct: 131 TENNFPEKVLL-----CFSNGNHYDIVYPV 155
>sp|Q9NP73|ALG13_HUMAN UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Homo
sapiens GN=ALG13 PE=1 SV=2
Length = 1137
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 27/151 (17%)
Query: 121 NIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQL---------------AHL 165
N S +++ + +++ LG LGL D CL+RA+ +QL +++
Sbjct: 210 NYCSQKSLNEASMDEYLGSLGLFRKLTAKDASCLFRAISEQLFCSQVHHLEIRKACVSYM 269
Query: 166 SGGEESAQSQVE-RFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMGKE 224
+++ +S VE FE Y + + G+LE+RAL+ + ++Y FP
Sbjct: 270 RENQQTFESYVEGSFEKYLERLGDPKESAGQLEIRALSLIYNRDFILY--RFPGKPPTYV 327
Query: 225 YSNGGSDSSGSSIILSYHRHAFGLGEHYNSV 255
NG D I+L Y HY+SV
Sbjct: 328 TDNGYED----KILLCYSSSG-----HYDSV 349
>sp|Q7ZX21|OTU5A_XENLA OTU domain-containing protein 5-A OS=Xenopus laevis GN=otud5-a PE=2
SV=1
Length = 513
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 47/162 (29%)
Query: 118 EQSNIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGEESAQSQVE 177
EQ + ++T+ D+K G + +K DG CL+RAV DQ+ G++ V
Sbjct: 150 EQQELCFEKTLSDKK--------GFIIKQMKEDGACLFRAVADQVY----GDQDMHEVVR 197
Query: 178 R------------FENYCKEVESTA--------AWGGELELRALTHCLRKHIMIYSGSFP 217
+ F NY E +T G +E++A+ + + +Y
Sbjct: 198 KHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVY----- 252
Query: 218 DVEMGKEYSN---GGSDSSGSSIILSYHRHAFGLGEHYNSVI 256
+ G E N G + I +SYHR+ HYNSV+
Sbjct: 253 --QYGTEPINTFHGIQKNEDEPIRVSYHRNI-----HYNSVV 287
>sp|Q08BW0|OTU5A_DANRE OTU domain-containing protein 5-A OS=Danio rerio GN=otud5a PE=2
SV=1
Length = 560
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 35/137 (25%)
Query: 141 GLTVNDIKPDGHCLYRAVEDQLAHLSGGEESAQSQVER------------FENYCKEVES 188
G + +K DG CL+RAV DQ+ G++ V + F NY E +
Sbjct: 210 GFVIKKMKEDGACLFRAVADQVY----GDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFT 265
Query: 189 TA--------AWGGELELRALTHCLRKHIMIY-SGSFPDVEMGKEYSNGGSDSSGSSIIL 239
T G +E++A+ + + +Y SG+ P +G ++ I +
Sbjct: 266 TYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQSGTEPINTF-----HGIHQNNDEPIRV 320
Query: 240 SYHRHAFGLGEHYNSVI 256
SYHR+ HYNSV+
Sbjct: 321 SYHRNI-----HYNSVV 332
>sp|Q5T2D3|OTUD3_HUMAN OTU domain-containing protein 3 OS=Homo sapiens GN=OTUD3 PE=1 SV=1
Length = 398
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 28/141 (19%)
Query: 136 KLGPLGLTVNDIKPDGHCLYRAVEDQL-----AHLSGGEESAQ---SQVERFENYC---- 183
+L LGL + ++ DG+CL+RA+ DQL HL +E+ Q E FE +
Sbjct: 59 QLQALGLKLREVPGDGNCLFRALGDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDI 118
Query: 184 ---KEVESTAAWGGELELRALTHCLRKH---IMIYSGSFPDVEMGKEYSNGGSDSSGSSI 237
K V S A G A+ R H ++I+ + P ++ G SS +
Sbjct: 119 PFEKHVASLAKPGTFAGNDAIVAFARNHQLNVVIHQLNAPLWQI-----RGTEKSSVREL 173
Query: 238 ILSYHRHAFGLGEHYNSVIPI 258
++Y GEHY+SV I
Sbjct: 174 HIAYR-----YGEHYDSVRRI 189
>sp|Q6GL44|OTUD5_XENTR OTU domain-containing protein 5 OS=Xenopus tropicalis GN=otud5 PE=2
SV=1
Length = 518
Score = 39.3 bits (90), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 56/139 (40%), Gaps = 39/139 (28%)
Query: 141 GLTVNDIKPDGHCLYRAVEDQLAHLSGGEESAQSQVER------------FENYCKEVES 188
G + +K DG CL+RAV DQ+ G++ V + F NY E +
Sbjct: 170 GFIIKQMKEDGACLFRAVADQVY----GDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFT 225
Query: 189 TA--------AWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYSN---GGSDSSGSSI 237
T G +E++A+ + + +Y + G E N G + I
Sbjct: 226 TYINRKRKNNCHGNHIEMQAMAEMYNRPVEVY-------QYGTEPINTFHGIQQNEDEPI 278
Query: 238 ILSYHRHAFGLGEHYNSVI 256
+SYHR+ HYNSV+
Sbjct: 279 RVSYHRNI-----HYNSVV 292
>sp|Q2YDU3|OTUD5_RAT OTU domain-containing protein 5 OS=Rattus norvegicus GN=Otud5 PE=2
SV=2
Length = 566
Score = 39.3 bits (90), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 33/136 (24%)
Query: 141 GLTVNDIKPDGHCLYRAVEDQLAHLSGGEESAQSQVER------------FENYCKEVES 188
G + +K DG CL+RAV DQ+ G++ V + F NY E +
Sbjct: 212 GFIIKQMKEDGACLFRAVADQVY----GDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFT 267
Query: 189 TA--------AWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYSNGGSDSSGSSIILS 240
T G +E++A+ + + +Y S + +G + I +S
Sbjct: 268 TYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINT----FHGIHQNEDEPIRVS 323
Query: 241 YHRHAFGLGEHYNSVI 256
YHR+ HYNSV+
Sbjct: 324 YHRNI-----HYNSVV 334
>sp|Q3U2S4|OTUD5_MOUSE OTU domain-containing protein 5 OS=Mus musculus GN=Otud5 PE=1 SV=2
Length = 566
Score = 39.3 bits (90), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 33/136 (24%)
Query: 141 GLTVNDIKPDGHCLYRAVEDQLAHLSGGEESAQSQVER------------FENYCKEVES 188
G + +K DG CL+RAV DQ+ G++ V + F NY E +
Sbjct: 212 GFIIKQMKEDGACLFRAVADQVY----GDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFT 267
Query: 189 TA--------AWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYSNGGSDSSGSSIILS 240
T G +E++A+ + + +Y S + +G + I +S
Sbjct: 268 TYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINT----FHGIHQNEDEPIRVS 323
Query: 241 YHRHAFGLGEHYNSVI 256
YHR+ HYNSV+
Sbjct: 324 YHRNI-----HYNSVV 334
>sp|Q640H3|OTU5B_XENLA OTU domain-containing protein 5-B OS=Xenopus laevis GN=otud5-b PE=2
SV=1
Length = 518
Score = 38.9 bits (89), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 56/139 (40%), Gaps = 39/139 (28%)
Query: 141 GLTVNDIKPDGHCLYRAVEDQLAHLSGGEESAQSQVER------------FENYCKEVES 188
G + +K DG CL+RAV DQ+ G++ V + F NY E +
Sbjct: 170 GFIIKQMKEDGACLFRAVADQVY----GDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFT 225
Query: 189 TA--------AWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYSN---GGSDSSGSSI 237
T G +E++A+ + + +Y + G E N G + I
Sbjct: 226 TYINRKRKNNCHGNHIEMQAMAEMYNRPVEVY-------QYGTEPINTFHGIQQNEDEPI 278
Query: 238 ILSYHRHAFGLGEHYNSVI 256
+SYHR+ HYNSV+
Sbjct: 279 RVSYHRNI-----HYNSVV 292
>sp|Q96G74|OTUD5_HUMAN OTU domain-containing protein 5 OS=Homo sapiens GN=OTUD5 PE=1 SV=1
Length = 571
Score = 38.1 bits (87), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 32/138 (23%)
Query: 141 GLTVNDIKPDGHCLYRAVEDQLAHLSGGEESAQSQVER------------FENYCKEVES 188
G + +K DG CL+RAV DQ+ G++ V + F NY E +
Sbjct: 212 GFIIKQMKEDGACLFRAVADQVY----GDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFT 267
Query: 189 TA--------AWGGELELRALTHCLRKHIMI--YSGSFPDVEMGKEYSNGGSDSSGSSII 238
T G +E++A+ + + + YS VE + +G + I
Sbjct: 268 TYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTGTSAVEPINTF-HGIHQNEDEPIR 326
Query: 239 LSYHRHAFGLGEHYNSVI 256
+SYHR+ HYNSV+
Sbjct: 327 VSYHRNI-----HYNSVV 339
>sp|Q8KML6|DNAK_LACSN Chaperone protein DnaK OS=Lactobacillus sanfranciscensis GN=dnaK
PE=3 SV=1
Length = 614
Score = 35.0 bits (79), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 8 EISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASLGYSSSNG 67
EI +++ E ELKKA A G+ + KAKK + E++ ++ KL ++ + G ++NG
Sbjct: 534 EIKGVKDAEEELKKAKADGNLDDMKAKKDTLNEKVQAVAVKLYQQQQSQGGEAG--AANG 591
Query: 68 NEKSNLDNLV 77
+ DN V
Sbjct: 592 DASKKDDNTV 601
>sp|Q5KWZ7|DNAK_GEOKA Chaperone protein DnaK OS=Geobacillus kaustophilus (strain HTA426)
GN=dnaK PE=1 SV=1
Length = 607
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 8 EISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASLGYSSSNG 67
EI + Q+ + LK A K + + KK ++E + +LS KL E+ AK+ S G
Sbjct: 530 EIKKAQDAKEALKAALEKNDIDDIRKKKDALQEAVQQLSIKLYEQAAKQAQSAGSQGGAA 589
Query: 68 NEKSNLDNLVKA 79
N K DN+V A
Sbjct: 590 NHK---DNVVDA 598
>sp|Q9RN18|Y6513_BACAN Uncharacterized protein pXO2-14/BXB0013/GBAA_pXO2_0013 OS=Bacillus
anthracis GN=pXO2-14 PE=4 SV=2
Length = 952
Score = 31.2 bits (69), Expect = 6.7, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 81/196 (41%), Gaps = 18/196 (9%)
Query: 2 LSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASLG 61
+ + ++++S + ++ K K Q K++ +E R + K + A+ G
Sbjct: 543 VDKGKEKVSGVAKGVSDSVKGTVSEFKGGQAEGKQKAQENADRQTLNTIGKGIQNNANAG 602
Query: 62 YSSSNGNEKSNLDNLVKAVAGVTVISQHDQAKPSKGTKRREKRAQQEAAREQRIQEEQSN 121
S + +N N VA ++ Q K + T RE Q + + + +Q N
Sbjct: 603 IEPSASPKIANRPN----VASISNERQQGNIKGERQTAEREIELQNKLRNTGKEEGKQGN 658
Query: 122 IVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGEESAQSQVERFEN 181
+ S+R + ++E + N ++ G + E Q ++ G ++A+ ++E +N
Sbjct: 659 VKSERQTAEREIELQ--------NKLRNTG-----STEGQQGNVKGERQTAEREIE-IQN 704
Query: 182 YCKEVESTAAWGGELE 197
+ T A G ++
Sbjct: 705 KLRNTGGTEASQGNMK 720
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.125 0.338
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,535,048
Number of Sequences: 539616
Number of extensions: 3770794
Number of successful extensions: 25648
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 1038
Number of HSP's that attempted gapping in prelim test: 22305
Number of HSP's gapped (non-prelim): 3459
length of query: 258
length of database: 191,569,459
effective HSP length: 115
effective length of query: 143
effective length of database: 129,513,619
effective search space: 18520447517
effective search space used: 18520447517
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)