RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 025075
(258 letters)
>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 144
Score = 140 bits (353), Expect = 2e-42
Identities = 92/143 (64%), Positives = 115/143 (80%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG Q
Sbjct: 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ 61
Query: 82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141
L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL A+ CP+A + +ISNPVN
Sbjct: 62 LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 121
Query: 142 STVPIAAEVFKKAGTYDPKKLLG 164
ST+PI AEVFKK G Y+P K+ G
Sbjct: 122 STIPITAEVFKKHGVYNPNKIFG 144
>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli
[TaxId: 562]}
Length = 145
Score = 119 bits (299), Expect = 2e-34
Identities = 84/145 (57%), Positives = 103/145 (71%), Gaps = 3/145 (2%)
Query: 22 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQ 79
KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++GF G+
Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE 61
Query: 80 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + +AK CP A + +I+NP
Sbjct: 62 -DATPALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120
Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLG 164
VN+TV IAAEV KKAG YD KL G
Sbjct: 121 VNTTVAIAAEVLKKAGVYDKNKLFG 145
>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum
vulgare), chloroplast [TaxId: 4558]}
Length = 175
Score = 111 bits (278), Expect = 5e-31
Identities = 27/137 (19%), Positives = 47/137 (34%), Gaps = 9/137 (6%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNTPGVTADISHMDTGA---VV 73
+A+ GAAG I L + + L L + ++ + ++
Sbjct: 26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLL 85
Query: 74 RGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNAT 132
R +D ++ PR PGM R L +IN I + + N
Sbjct: 86 REVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVK 145
Query: 133 VNLISNPVNSTVPIAAE 149
V ++ NP N+ I +
Sbjct: 146 VLVVGNPCNTNALICLK 162
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 142
Score = 104 bits (261), Expect = 6e-29
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 5/143 (3%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
KVAI+GA G +G A M + + L L DV + + +
Sbjct: 3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG 61
Query: 82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141
+ + D++++ AG RKPG TR DL N I + + + I K + + ++SNPV+
Sbjct: 62 DYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVD 121
Query: 142 STVPIAAEVFKKAGTYDPKKLLG 164
+ +K K++G
Sbjct: 122 IITYMI----QKWSGLPVGKVIG 140
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 142
Score = 103 bits (259), Expect = 1e-28
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 79
K+ +GA G +G A +N V + L D+ G D++H G +
Sbjct: 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG 60
Query: 80 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
+ L G +++++ AG+ RKPGMTR DL + NAGI++ + + I + P + + +++NP
Sbjct: 61 GADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP 120
Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLGV 165
++ I K ++ G+
Sbjct: 121 MDVMTYIM----WKESGKPRNEVFGM 142
>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 154
Score = 104 bits (260), Expect = 1e-28
Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 12/149 (8%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVS--------VLHLYDVVNTPGVTADISHMDTGAVV 73
+VA+ GAAG IG L + ++ +L + + ++
Sbjct: 6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL 65
Query: 74 RGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNAT 132
G + A D ++ PRK GM R DL +N I +A+ +
Sbjct: 66 AGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVK 125
Query: 133 VNLISNPVNSTVPIAAEVFKKAGTYDPKK 161
V ++ NP N+ IA +K A +P+
Sbjct: 126 VLVVGNPANTNALIA---YKNAPGLNPRN 151
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 140
Score = 103 bits (257), Expect = 2e-28
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
K+ I+G G +G A + + + L DV + + R
Sbjct: 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG 60
Query: 82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141
L G D+VI+ AGVP+KPG TR L NA +++ + ++K P++ V +++NPV+
Sbjct: 61 DYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD 120
Query: 142 STVPIAAEVFKKAGTYDPKKLLG 164
+ F K DP+K+ G
Sbjct: 121 ----VLTYFFLKESGMDPRKVFG 139
>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 142
Score = 103 bits (257), Expect = 2e-28
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 10/147 (6%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFL 77
KV+++GAAG +G + + + + D+ + T G AD +H A
Sbjct: 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNH--GIAYDSNTR 59
Query: 78 GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137
+ G D+V+I AG+PR+PG TR DL NA I+ + + + + S
Sbjct: 60 VRQGGYEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119
Query: 138 NPVNSTVPIAAEVFKKAGTYDPKKLLG 164
NPV+ + +AG ++++G
Sbjct: 120 NPVD----LLNRHLYEAGDRSREQVIG 142
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium
longum, strain am101-2 [TaxId: 216816]}
Length = 143
Score = 102 bits (256), Expect = 3e-28
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 8/145 (5%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
K+A++GA G +G LA + + L D+ D+ H + G
Sbjct: 3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS 61
Query: 80 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
E D+V+I AG +KPG +R +L I++ + + K PNA LI+NP
Sbjct: 62 DDPE-ICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNP 120
Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLG 164
V+ IA V +K ++ G
Sbjct: 121 VD----IATHVAQKLTGLPENQIFG 141
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 102 bits (254), Expect = 6e-28
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQP 80
K++I+GA G +G A + L ++ L V P G D+ +
Sbjct: 3 KISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT 61
Query: 81 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 140
D++++ +G PRKPGM+R+DL +NA I R A PNA + +++NP+
Sbjct: 62 NNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 121
Query: 141 NSTVPIAAEVFKKAGTYDPKKLLG 164
++ +AAEV + ++++G
Sbjct: 122 DAMTYLAAEVSG----FPKERVIG 141
>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 154
Score = 102 bits (254), Expect = 8e-28
Identities = 30/141 (21%), Positives = 53/141 (37%), Gaps = 9/141 (6%)
Query: 22 KVAILGAAGGIGQPLAML-----MKINPLVSVLHLYDVVNTPGVTADISHMDTGAVV--- 73
+V + GAAG I L + +L L D+ GV + +
Sbjct: 5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL 64
Query: 74 RGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATV 133
+ + + E A +D+ I+ +PR+ GM R DL N I + + K +
Sbjct: 65 KDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVK 124
Query: 134 NL-ISNPVNSTVPIAAEVFKK 153
+ + NP N+ A++
Sbjct: 125 VIVVGNPANTNCLTASKSAPS 145
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 142
Score = 101 bits (252), Expect = 2e-27
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
K+ ++GA G +G A + L L L DVV G D+ + +
Sbjct: 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG 60
Query: 80 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
D+VII AG+PRKPGMTR+DL NAGIV+ + + I K N + ++SNP
Sbjct: 61 SNDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 120
Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLGV 165
++ +A ++++G+
Sbjct: 121 LDIMTHVA----WVRSGLPKERVIGM 142
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 97.5 bits (242), Expect = 4e-26
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGF 76
A K+ ++G+ G IG +A L+ L V+ V N P G D SH + A
Sbjct: 1 APKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCK 59
Query: 77 LGQPQLENALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNA 131
+ + L G D+VI+ AG + PG + RDDL +N I+ + I K CPNA
Sbjct: 60 VSGSNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNA 119
Query: 132 TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV 165
+ +++NPV+ V + + K++G+
Sbjct: 120 FIIVVTNPVDVMVQLL----HQHSGVPKNKIIGL 149
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 93.2 bits (231), Expect = 2e-24
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 5/143 (3%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
KV ++G G +G A M + + DVV + D A
Sbjct: 7 KVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSG 65
Query: 82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141
+ DLV+I AG P+KPG +R DL N N I+ ++ + + + + +NPV+
Sbjct: 66 EYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVD 125
Query: 142 STVPIAAEVFKKAGTYDPKKLLG 164
I K + ++++G
Sbjct: 126 ----ILTYATWKFSGFPKERVIG 144
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 91.3 bits (226), Expect = 1e-23
Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA--DISHMDTGAVVRGFL 77
G +V ++GA G +G + + + L D + + D +H A +
Sbjct: 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDI 64
Query: 78 GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137
+ DLV+I AG +KPG TR DL + N I R++ E + + +
Sbjct: 65 WHGDYD-DCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123
Query: 138 NPVNSTVPIAAEVFKKAGTYDPKKLLG 164
NPV+ I K ++++G
Sbjct: 124 NPVD----ILTYATWKFSGLPHERVIG 146
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii
[TaxId: 5811]}
Length = 154
Score = 91.3 bits (226), Expect = 1e-23
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 12/150 (8%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-DISHMDTGAVVRGFLGQP 80
KVA++G+ G IG + L + L V+ V P A D+SH+ + +
Sbjct: 9 KVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE 67
Query: 81 -QLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
E ALTG D VI+ AG+ + PG +R+DL N+ I+R + + I K CP +
Sbjct: 68 YSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFII 127
Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPKKLLG 164
+++NP++ V + E + G
Sbjct: 128 VVTNPLDCMVKVMCEASG----VPTNMICG 153
>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 169
Score = 91.3 bits (226), Expect = 1e-23
Identities = 56/91 (61%), Positives = 64/91 (70%)
Query: 165 VTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTN 224
VT LD+VRAN FVAE+ GLDP V VPV+GGHAG TI+PL+SQ P F Q++ LT
Sbjct: 1 VTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLSTLTG 60
Query: 225 RIQNGGTEVVEAKAGAGSATLSMRLNLRMHA 255
RIQ GTEVV+AKAGAGSATLSM
Sbjct: 61 RIQEAGTEVVKAKAGAGSATLSMAYAGARFV 91
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 91.2 bits (226), Expect = 2e-23
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 8/145 (5%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 79
K+ ++G G +G A+ + + L L L D G D+ H + +
Sbjct: 21 KITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSL-FLSTPKIVF 78
Query: 80 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
+ N LVII AG G TR DL N I++ + G+ + P+ + +++NP
Sbjct: 79 GKDYNVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTNP 138
Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLG 164
V+ + K + +++G
Sbjct: 139 VDILTYVVW----KISGFPVGRVIG 159
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 89.7 bits (222), Expect = 6e-23
Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 8/145 (5%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
K+ ++G G +G A+ + L L L DV+ G D+ H +
Sbjct: 22 KITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD 80
Query: 80 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
+V++ AGV ++ G +R +L N + + + I K P+ + ++SNP
Sbjct: 81 KDYS-VTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNP 139
Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLG 164
V+ + K +++G
Sbjct: 140 VDILTYVT----WKLSGLPKHRVIG 160
>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia
coli [TaxId: 562]}
Length = 167
Score = 86.7 bits (214), Expect = 1e-21
Identities = 57/91 (62%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Query: 165 VTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTN 224
VT LD++R+NTFVAE+ G P +V+VPV+GGH+GVTILPLLSQV FT++E LT
Sbjct: 1 VTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVS-FTEQEVADLTK 59
Query: 225 RIQNGGTEVVEAKAGAGSATLSMRLNLRMHA 255
RIQN GTEVVEAKAG GSATLSM
Sbjct: 60 RIQNAGTEVVEAKAGGGSATLSMGQAAARFG 90
>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 145
Score = 86.0 bits (212), Expect = 1e-21
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYD----VVNTPGVTADISHMDTGAVV--RG 75
KV I+GA+G +G A+L+ P + L L + G+ DI G
Sbjct: 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANI 61
Query: 76 FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 135
++ + + D+VII +GVPRK GM+R DL NA IV + IA+ C + +
Sbjct: 62 YVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTK-IFV 120
Query: 136 ISNPVNSTVPIAAEVFKKAGTYDPKKLLG 164
I+NPV+ A ++ ++ G
Sbjct: 121 ITNPVDVMTYKAL----VDSKFERNQVFG 145
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase,
L-HICDH {Lactobacillus confusus [TaxId: 1583]}
Length = 146
Score = 85.9 bits (212), Expect = 1e-21
Identities = 27/148 (18%), Positives = 54/148 (36%), Gaps = 10/148 (6%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
K+ I+G G +G +A + + D I D A +
Sbjct: 3 KIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI 61
Query: 82 LEN-ALTGMDLVIIPAGVPR----KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136
+ AL D+VI G + P R + +V+++ + + + + +I
Sbjct: 62 NDWAALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVI 121
Query: 137 SNPVNSTVPIAAEVFKKAGTYDPKKLLG 164
SNPV+ + +F+ + K++G
Sbjct: 122 SNPVD----VITALFQHVTGFPAHKVIG 145
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga
maritima [TaxId: 2336]}
Length = 162
Score = 76.6 bits (188), Expect = 6e-18
Identities = 23/167 (13%), Positives = 49/167 (29%), Gaps = 32/167 (19%)
Query: 22 KVAILGAAGGIGQPLAMLMKI----NPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGF 76
++A++G G P + + + + + YD+ + D +
Sbjct: 2 RIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVL 60
Query: 77 LGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIA----------- 125
+ E A+ VI G D+ + G++ G+
Sbjct: 61 ISD-TFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPI 119
Query: 126 --------KCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG 164
+ NAT+ +NP E + + +K +G
Sbjct: 120 VEEYVDTVRKTSNATIVNFTNPSG----HITEFVRNY--LEYEKFIG 160
>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 163
Score = 72.0 bits (176), Expect = 3e-16
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 167 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS----FTQEETEYL 222
+LD R +F+A LG+ +D++ V+GGH + + E + L
Sbjct: 3 VLDAARFRSFIAMELGVSMQDINACVLGGHGDAMVPVVKYTTVAGIPISDLLPAETIDKL 62
Query: 223 TNRIQNGGTEVVEAKAGAGSATLSMRLNLRMHA 255
R +NGG E+VE GSA + ++
Sbjct: 63 VERTRNGGAEIVEH-LKQGSAFYAPASSVVEMV 94
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA
{Bacillus subtilis [TaxId: 1423]}
Length = 167
Score = 71.2 bits (174), Expect = 5e-16
Identities = 28/162 (17%), Positives = 46/162 (28%), Gaps = 30/162 (18%)
Query: 21 FKVAILGAAGGIGQP---LAMLMKINPL-VSVLHLYDV----VNTPGVTADISHMDTGAV 72
F + I G G P L +L + + L LYD + D+ +
Sbjct: 4 FSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPD 62
Query: 73 VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIA------- 125
+ E A T +D V+ V + D+ + G+V G
Sbjct: 63 IEFA-ATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMR 121
Query: 126 -------------KCCPNATVNLISNPVNSTVPIAAEVFKKA 154
K P+A + SNP + +
Sbjct: 122 SIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPNS 163
>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 169
Score = 71.2 bits (174), Expect = 5e-16
Identities = 26/161 (16%), Positives = 42/161 (26%), Gaps = 30/161 (18%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPL----VSVLHLYDVVNTP--GVTADISH---MDTGAV 72
K+A +G G P + I V L L D+ ++ V
Sbjct: 3 KIATIGG-GSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGV 61
Query: 73 VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGI-------- 124
AL G D V V +D+ + G++ G
Sbjct: 62 PIEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLR 121
Query: 125 ------------AKCCPNATVNLISNPVNSTVPIAAEVFKK 153
+ CP+A + +NP K+
Sbjct: 122 TIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYTKQ 162
>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 164
Score = 64.7 bits (157), Expect = 1e-13
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 167 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEY----L 222
+LD R TF+A G+ +DV ++GGH + ++ +
Sbjct: 3 VLDAARYRTFIAMEAGVSVKDVQAMLMGGHGDEMVPLPRFSTISGIPVSEFIAPDRLAQI 62
Query: 223 TNRIQNGGTEVVEAKAGAGSATLSM 247
R + GG E+V GSA +
Sbjct: 63 VERTRKGGGEIVNLLKT-GSAYYAP 86
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga
maritima [TaxId: 2336]}
Length = 171
Score = 64.0 bits (155), Expect = 2e-13
Identities = 25/166 (15%), Positives = 41/166 (24%), Gaps = 34/166 (20%)
Query: 20 GFKVAILGAAGGIGQPLAM---LMKINPL-VSVLHLYDVV--NTPGVTADISHM-DTGAV 72
K+ I+GA G L + L K L S + L D+ + +
Sbjct: 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGA 60
Query: 73 VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI-------------------- 112
F L++ + D VI A V + +
Sbjct: 61 DLKFEKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYY 120
Query: 113 ------NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFK 152
+ I K P A +NP+ +
Sbjct: 121 TFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLVTRTVP 166
>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 179
Score = 63.6 bits (154), Expect = 4e-13
Identities = 18/83 (21%), Positives = 29/83 (34%)
Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 225
T LD RA +A LG+ DV ++ G+ T P ++ K +
Sbjct: 1 TRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKD 60
Query: 226 IQNGGTEVVEAKAGAGSATLSMR 248
E + G+A + R
Sbjct: 61 DSWLKGEFITTVQQRGAAVIKAR 83
>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate
dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId:
1583]}
Length = 163
Score = 61.0 bits (147), Expect = 3e-12
Identities = 17/95 (17%), Positives = 29/95 (30%), Gaps = 6/95 (6%)
Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQ------VKPPCSFTQEET 219
T+LD R V E LDPR V +G H + + + +
Sbjct: 2 TLLDTARMQRAVGEAFDLDPRSVSGYNLGEHGNSQFVAWSTVRVMGQPIVTLADAGDIDL 61
Query: 220 EYLTNRIQNGGTEVVEAKAGAGSATLSMRLNLRMH 254
+ + GG V+ K + + +
Sbjct: 62 AAIEEEARKGGFTVLNGKGYTSYGVATSAIRIAKA 96
>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish
(Squalus acanthias) [TaxId: 7797]}
Length = 169
Score = 59.9 bits (144), Expect = 7e-12
Identities = 15/96 (15%), Positives = 26/96 (27%), Gaps = 8/96 (8%)
Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ--------E 217
LD R + E LG+ V+G H +
Sbjct: 3 CNLDSARFRYLMGERLGVHSCSCHGWVIGEHGDSVPSVWSGMNVASIKLHPLDGTNKDKQ 62
Query: 218 ETEYLTNRIQNGGTEVVEAKAGAGSATLSMRLNLRM 253
+ + L + + EV++ K A +L
Sbjct: 63 DWKKLHKDVVDSAYEVIKLKGYTSWAIGLSVADLAE 98
>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 168
Score = 59.9 bits (144), Expect = 8e-12
Identities = 12/99 (12%), Positives = 31/99 (31%), Gaps = 10/99 (10%)
Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ--------- 216
T+LD R + E + P++V ++G H + +
Sbjct: 1 TILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGEEA 60
Query: 217 -EETEYLTNRIQNGGTEVVEAKAGAGSATLSMRLNLRMH 254
++ E + +++ +++E K +
Sbjct: 61 QKDLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRA 99
>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 169
Score = 59.5 bits (143), Expect = 1e-11
Identities = 14/100 (14%), Positives = 35/100 (35%), Gaps = 11/100 (11%)
Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ--------- 216
T+LD +R ++E LG+D ++V ++G H + + +
Sbjct: 1 TVLDSIRFRYLLSEKLGVDVKNVHGYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNF 60
Query: 217 --EETEYLTNRIQNGGTEVVEAKAGAGSATLSMRLNLRMH 254
E+ + + ++ G +++ K +
Sbjct: 61 TEEDKKKIAEDVKTAGATIIKNKGATYYGIAVSINTIVET 100
>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase
{Bifidobacterium longum, strain am101-2 [TaxId: 216816]}
Length = 170
Score = 59.1 bits (142), Expect = 1e-11
Identities = 14/91 (15%), Positives = 30/91 (32%), Gaps = 12/91 (13%)
Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS------------ 213
T LD R +A+ G++ ++V + G H + S
Sbjct: 1 TNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGDSEVPLWESATIGGVPMSDWTPLPGHDP 60
Query: 214 FTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 244
++ E + ++N +++ K A
Sbjct: 61 LDADKREEIHQEVKNAAYKIINGKGATNYAI 91
>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus
casei [TaxId: 1582]}
Length = 172
Score = 59.1 bits (142), Expect = 2e-11
Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 10/82 (12%)
Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILP----------LLSQVKPPCSFT 215
T LD R +AE++ +D R V ++G H + VK
Sbjct: 1 TSLDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 60
Query: 216 QEETEYLTNRIQNGGTEVVEAK 237
+++ + +++ E+++ K
Sbjct: 61 EDKLVKMFEDVRDAAYEIIKLK 82
>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 168
Score = 57.6 bits (138), Expect = 6e-11
Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 225
T LD +R +A+ G+ +V ++G H G +++PLLS Q+ +
Sbjct: 3 THLDSLRFKVAIAKFFGVHIDEVRTRIIGEH-GDSMVPLLSATSIGGIPIQKFERFKELP 61
Query: 226 IQNGGTEVVEAKAGAGSATLSM 247
I +V
Sbjct: 62 IDEIIEDVKTKGEQIIRLKGGS 83
>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 172
Score = 57.6 bits (138), Expect = 7e-11
Identities = 19/100 (19%), Positives = 32/100 (32%), Gaps = 10/100 (10%)
Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPP----------CSFT 215
T+LD R T +A+ G PR V V V+G H + +
Sbjct: 2 TVLDTARLRTLIAQHCGFSPRSVHVYVIGEHGDSEVPVWSGAMIGGIPLQNMCQVCQKCD 61
Query: 216 QEETEYLTNRIQNGGTEVVEAKAGAGSATLSMRLNLRMHA 255
+ E + + E++E K A ++
Sbjct: 62 SKILENFAEKTKRAAYEIIERKGATHYAIALAVADIVESI 101
>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 172
Score = 57.2 bits (137), Expect = 9e-11
Identities = 20/102 (19%), Positives = 33/102 (32%), Gaps = 13/102 (12%)
Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ--------- 216
LD R +AE LG+ P ++G H G + + + S V Q
Sbjct: 3 CNLDSARFRYLMAEKLGIHPSSCHGWILGEH-GDSSVAVWSGVNVAGVSLQELNPEMGTD 61
Query: 217 ---EETEYLTNRIQNGGTEVVEAKAGAGSATLSMRLNLRMHA 255
E + + + EV++ K A +L
Sbjct: 62 NDSENWKEVHKMVVESAYEVIKLKGYTNWAIGLSVADLIESM 103
>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 161
Score = 56.4 bits (135), Expect = 1e-10
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQV---KPPCSFTQEETEYL 222
LD R ++E ++V+ ++G H G +P+ S+V F+ +E E L
Sbjct: 3 GRLDSARFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVSVDGTDPEFSGDEKEQL 61
Query: 223 TNRIQNGGTEVVEAK 237
+Q +V+E K
Sbjct: 62 LGDLQESAMDVIERK 76
>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 171
Score = 55.6 bits (133), Expect = 2e-10
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKP 210
T LD R + + +DPR VD ++G H G + S
Sbjct: 1 TSLDSSRLRVALGKQFNVDPRSVDAYIMGEH-GDSEFAAYSTATI 44
>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 172
Score = 55.3 bits (132), Expect = 3e-10
Identities = 12/74 (16%), Positives = 23/74 (31%)
Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 225
LD R + E LG++P V+G H ++ + T++
Sbjct: 3 CNLDSARFRYLIGEKLGVNPTSCHGWVLGEHGDSSVPIWSGVNVAGVTLKSLNPAIGTDK 62
Query: 226 IQNGGTEVVEAKAG 239
+ V +
Sbjct: 63 NKQHWKNVHKQVVE 76
>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma
gondii [TaxId: 5811]}
Length = 174
Score = 54.5 bits (130), Expect = 8e-10
Identities = 16/82 (19%), Positives = 27/82 (32%)
Query: 167 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRI 226
MLD R +VA+ L + PRDV V+G H + + + + +
Sbjct: 3 MLDSGRFRRYVADALSVSPRDVQATVIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEK 62
Query: 227 QNGGTEVVEAKAGAGSATLSMR 248
Q +G +
Sbjct: 63 QLEEIAEHTKVSGGEIVRFLGQ 84
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria
parasite (Plasmodium falciparum) [TaxId: 5833]}
Length = 165
Score = 54.1 bits (129), Expect = 1e-09
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 167 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPL---------LSQVKPPCSFTQE 217
+LD R ++++ L + PRDV+ +VG H +L L + +
Sbjct: 2 VLDTSRLKYYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDA 61
Query: 218 ETEYLTNRIQNGGTEVV 234
E E + +R N E+V
Sbjct: 62 ELEAIFDRTVNTALEIV 78
>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum
(Sorghum vulgare), chloroplast [TaxId: 4558]}
Length = 188
Score = 52.0 bits (124), Expect = 7e-09
Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 9/92 (9%)
Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEET------ 219
T LD RA +A G+ V + G+ T +P K +E
Sbjct: 1 TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTKWL 60
Query: 220 -EYLTNRIQNGGTEVVEAKAG--AGSATLSMR 248
E T +Q G +++ A S +S+
Sbjct: 61 EEEFTITVQKRGGALIQKWGRSSAASTAVSIA 92
>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 173
Score = 50.9 bits (121), Expect = 1e-08
Identities = 17/86 (19%), Positives = 25/86 (29%), Gaps = 4/86 (4%)
Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVK----PPCSFTQEETEY 221
T LD RA +A+ G + V G+ T+ P L + P E
Sbjct: 2 TRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYE 61
Query: 222 LTNRIQNGGTEVVEAKAGAGSATLSM 247
+A S+ S
Sbjct: 62 KVFIPTVAQRGAAIIQARGASSAASA 87
>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum
arcticum [TaxId: 87645]}
Length = 171
Score = 50.2 bits (119), Expect = 2e-08
Identities = 9/46 (19%), Positives = 17/46 (36%)
Query: 168 LDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS 213
LD RA + +A G ++ V G+ T+ + +
Sbjct: 3 LDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGA 48
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 205
Score = 32.3 bits (72), Expect = 0.033
Identities = 27/150 (18%), Positives = 45/150 (30%), Gaps = 6/150 (4%)
Query: 22 KVAILGAAGGIGQPLA-MLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQP 80
K+AI GA G G ++ V+VL V VV L
Sbjct: 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVL-----VRDSSRLPSEGPRPAHVVVGDVLQAA 59
Query: 81 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 140
++ + G D VI+ G T + G+ K + L+ +P
Sbjct: 60 DVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPT 119
Query: 141 NSTVPIAAEVFKKAGTYDPKKLLGVTMLDV 170
+ A + + G+ + V
Sbjct: 120 KVPPRLQAVTDDHIRMHKVLRESGLKYVAV 149
>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate
dehydrogenase/cyclohydrolase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 171
Score = 30.8 bits (69), Expect = 0.084
Identities = 15/114 (13%), Positives = 35/114 (30%), Gaps = 5/114 (4%)
Query: 19 AGFKVAILGAAGGIGQPLAMLM-KINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL 77
G K ++ + +G+PLA L+ V + + + + + G
Sbjct: 28 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDV-NNIQKFTRGESLKLNKHHVEDLGEY 86
Query: 78 GQPQLENALTGMDLVIIPAGVPR---KPGMTRDDLFNINAGIVRTLCEGIAKCC 128
+ L+ D+VI ++ IN + + + +
Sbjct: 87 SEDLLKKCSLDSDVVITGVPSENYKFPTEYIKEGAVCINFACTKNFSDDVKEKA 140
>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase
(acylating) {Pseudomonas sp. [TaxId: 306]}
Length = 157
Score = 30.8 bits (69), Expect = 0.085
Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 14/142 (9%)
Query: 21 FKVAILGAAGGIGQPLAM-LMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ 79
KVAI+G+ G IG L + +++ + + + + A M G G
Sbjct: 5 LKVAIIGS-GNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGL 63
Query: 80 PQLENALTGMDLVII--PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT----- 132
+L +D V A + I T C P
Sbjct: 64 IKLPE-FADIDFVFDATSASAHVQNEALLRQAKPGIRLIDLTPAAIGPYCVPVVNLEEHL 122
Query: 133 ----VNLISNPVNSTVPIAAEV 150
VN+++ N + +A +
Sbjct: 123 GKLNVNMVTYAGNLDIMTSAAL 144
>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde
dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}
Length = 154
Score = 29.5 bits (65), Expect = 0.27
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 20 GFKVAILGAAGGIGQ 34
G+ VA++GA G +G
Sbjct: 1 GYTVAVVGATGAVGA 15
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO)
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 212
Score = 28.9 bits (63), Expect = 0.54
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 22 KVAILGAAGGIGQPLAMLM 40
+VA+LG G +G+ LA+ +
Sbjct: 2 RVALLGGTGNLGKGLALRL 20
>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde
dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}
Length = 183
Score = 28.4 bits (62), Expect = 0.57
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLY 52
++A+LGA+G G + L+ +P + +
Sbjct: 7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMT 37
>d1vkna1 c.2.1.3 (A:1-144,A:308-339)
N-acetyl-gamma-glutamyl-phosphate reductase ArgC
{Thermotoga maritima [TaxId: 2336]}
Length = 176
Score = 28.3 bits (62), Expect = 0.65
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLY 52
+ I+GA G G L L+K +P + +L
Sbjct: 3 RAGIIGATGYTGLELVRLLKNHPEAKITYLS 33
>d2g17a1 c.2.1.3 (A:1-153,A:309-334)
N-acetyl-gamma-glutamyl-phosphate reductase ArgC
{Salmonella typhimurium [TaxId: 90371]}
Length = 179
Score = 27.3 bits (59), Expect = 1.3
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLY 52
I+GA+G G L + +P +++ L
Sbjct: 3 NTLIVGASGYAGAELVSYVNRHPHMTITALT 33
>d1fltx_ b.1.1.4 (X:) Second domain of the Flt-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 25.9 bits (57), Expect = 2.4
Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 5/33 (15%)
Query: 129 PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK 161
PN TV L P+++ +P + +D +K
Sbjct: 32 PNITVTLKKFPLDTLIPDGKRI-----IWDSRK 59
>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 312
Score = 26.9 bits (59), Expect = 2.4
Identities = 22/154 (14%), Positives = 42/154 (27%), Gaps = 18/154 (11%)
Query: 22 KVAILGAAGGIGQPLA-MLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQP 80
++ I G AG +G L LM V+V+ + V I H + +
Sbjct: 3 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENF-----ELINHD 57
Query: 81 QLENALTGMDLVIIPAGVPRKPGMTRD--DLFNINAGIVRTLCEGIAKCCPNATVNLI-- 136
+E +D + A P + N + L+
Sbjct: 58 VVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLG----LAKRVGARLLLA 113
Query: 137 -SNPV---NSTVPIAAEVFKKAGTYDPKKLLGVT 166
++ V P + + + P+
Sbjct: 114 STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEG 147
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant
arborvitae (Thuja plicata) [TaxId: 3316]}
Length = 312
Score = 27.0 bits (58), Expect = 2.5
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 22 KVAILGAAGGIGQPLA 37
+V I+G G IG+ +
Sbjct: 5 RVLIVGGTGYIGKRIV 20
>d1s6ya2 d.162.1.2 (A:173-445) 6-phospho-beta-glucosidase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 270
Score = 26.8 bits (59), Expect = 2.7
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 177 VAEVLGLDPRDVDVPVVG 194
VA++LG+D V + G
Sbjct: 10 VAKLLGVDADRVHIDFAG 27
>d1zrra1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Klebsiella
pneumoniae [TaxId: 573]}
Length = 179
Score = 26.3 bits (58), Expect = 2.8
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 78 GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLF 110
G + DL+ +PA P M + F
Sbjct: 118 GDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNF 150
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin
dehydrogenase {Methylobacterium extorquens [TaxId: 408]}
Length = 191
Score = 26.4 bits (57), Expect = 3.0
Identities = 14/114 (12%), Positives = 28/114 (24%), Gaps = 2/114 (1%)
Query: 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG 78
G K +L G +G A L+ VL + ++ V
Sbjct: 22 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETA 81
Query: 79 QP-QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA 131
A+ G V + + + + N ++ +
Sbjct: 82 DDASRAEAVKGAHFVFTAGAIGLEL-LPQAAWQNESSIEIVADYNAQPPLGIGG 134
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase
{Loblolly pine (Pinus taeda) [TaxId: 3352]}
Length = 307
Score = 26.7 bits (57), Expect = 3.1
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 22 KVAILGAAGGIGQPLA 37
++ ++GA G IG+ +A
Sbjct: 5 RILLIGATGYIGRHVA 20
>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptococcus suis, serotype 2 [TaxId: 1307]}
Length = 361
Score = 26.6 bits (58), Expect = 3.2
Identities = 19/128 (14%), Positives = 32/128 (25%), Gaps = 11/128 (8%)
Query: 22 KVAILGAAGGIGQPLA-MLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-- 78
K+ I G AG IG + ++K + D + G +S +
Sbjct: 2 KILITGGAGFIGSAVVRHIIKNTQ--DTVVNIDKLTYAGNLESLSDISESNRYNFEHADI 59
Query: 79 --QPQLENALTGM--DLVIIPAGVPRKPGMTRD--DLFNINAGIVRTLCEGIAKCCPNAT 132
++ D V+ A N L E K
Sbjct: 60 CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALG 119
Query: 133 VNLISNPV 140
+ +N
Sbjct: 120 EDKKNNFR 127
>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA
{Haemophilus influenzae [TaxId: 727]}
Length = 152
Score = 26.0 bits (56), Expect = 3.8
Identities = 7/51 (13%), Positives = 18/51 (35%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV 72
K+ I+G G +G A ++ + + + + + +V
Sbjct: 11 KIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSV 61
>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase
{Escherichia coli [TaxId: 562]}
Length = 162
Score = 26.0 bits (56), Expect = 3.8
Identities = 10/46 (21%), Positives = 19/46 (41%)
Query: 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM 67
+VAI GA G +G+ L V + + + + +D +
Sbjct: 6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGEL 51
>d1vjta1 c.2.1.5 (A:-1-191) Putative alpha-glucosidase TM0752
{Thermotoga maritima [TaxId: 2336]}
Length = 193
Score = 25.9 bits (56), Expect = 3.9
Identities = 23/164 (14%), Positives = 40/164 (24%), Gaps = 44/164 (26%)
Query: 20 GFKVAILGAAGGIGQPLAMLMKINPLVS--------VLHLYDVVNTPGVTADISHM-DTG 70
K++I+GA G + L ++ I + +
Sbjct: 2 HMKISIIGA-GSVRFALQLVGDIAQTEELSREDTHIYMMDVHERRLNASYILARKYVEEL 60
Query: 71 AVVRGFLGQPQLENALTGMDLVII-------------------PAGVPRKPGMTRDDLFN 111
+ L+ A+ G D +I V K G R
Sbjct: 61 NSPVKIVKTSSLDEAIDGADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQ 120
Query: 112 INAGI---------------VRTLCEGIAKCCPNATVNLISNPV 140
+ + E + K P A + +NPV
Sbjct: 121 ELNMVSTYTYVLSSYPDMKLALEIAEKMKKMAPKAYLMQTANPV 164
>d1obba2 d.162.1.2 (A:173-480) Alpha-glucosidase AglA {Thermotoga
maritima [TaxId: 2336]}
Length = 308
Score = 26.2 bits (57), Expect = 4.0
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 177 VAEVLGLDPRDVDVPVVG 194
+ E LGL+ VD V G
Sbjct: 11 IVEKLGLEEEKVDWQVAG 28
>d1o98a1 c.105.1.1 (A:77-310) 2,3-Bisphosphoglycerate-independent
phosphoglycerate mutase, substrate-binding domain
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 234
Score = 25.8 bits (56), Expect = 5.4
Identities = 8/51 (15%), Positives = 16/51 (31%)
Query: 81 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA 131
+L+ + + I R M RD ++ R + G +
Sbjct: 90 ELQEKIKEYGVGEIATLSGRYYSMDRDKRWDRVEKAYRAMVYGEGPTYRDP 140
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240
(T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 252
Score = 25.9 bits (55), Expect = 5.5
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 23 VAILGAAGGIGQPLA-MLMKINPLVSVLHL 51
V + GA+G GQ + L + + L
Sbjct: 6 VLVTGASGRTGQIVYKKLKEGSDKFVAKGL 35
>d1irud_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 243
Score = 25.4 bits (55), Expect = 6.7
Identities = 11/57 (19%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 147 AAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILP 203
E +K T + + +T+ V++A + EV+ +++++ V+ + IL
Sbjct: 167 VREFLEKNYTDEAIETDDLTIKLVIKA---LLEVVQSGGKNIELAVMRRDQSLKILN 220
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.397
Gapped
Lambda K H
0.267 0.0548 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 926,228
Number of extensions: 43029
Number of successful extensions: 280
Number of sequences better than 10.0: 1
Number of HSP's gapped: 248
Number of HSP's successfully gapped: 81
Length of query: 258
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 175
Effective length of database: 1,268,006
Effective search space: 221901050
Effective search space used: 221901050
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.2 bits)