BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025076
(258 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55909|Y305_SYNY3 TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1
Length = 209
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 15/192 (7%)
Query: 41 EWSDRLGVWAIPVFVGFHTLTIALCLPYAVFFEAAASLLFGFFPAVLCVFSAKLLGASLS 100
+W D LG WA F+ +T+ + LP ++ A ++FG + VF LGA+ +
Sbjct: 10 QWIDGLGTWAAIAFMLLYTVATVVFLPGSI-LTLGAGVVFGVILGSIYVFIGATLGATAA 68
Query: 101 FWIGRLVFKSSNSAMEWAQR----NKYFHILSRGVEKDGWKFVVLARFSPM-PSYVINYA 155
F +GR + A W + N+ F + V K+G K V+L R SP+ P ++NYA
Sbjct: 69 FLVGRYL------ARGWVAKKIAGNQKFKAIDEAVGKEGLKIVILTRLSPVFPFNLLNYA 122
Query: 156 LAATNVGFVVDFLLPTIIGCLPMILQNTSIGSLAGA-AVASASSSWKSQVWSYLFPLLGI 214
TNV D+++ + +G +P + IGSLAG+ A +++ + + ++G
Sbjct: 123 YGITNVSL-KDYVIGS-LGMIPGTIMYVYIGSLAGSLATLGTATNQANPTLQWTIRIVGF 180
Query: 215 VSSILISFRIKK 226
++++ ++ + K
Sbjct: 181 IATVAVTIYVTK 192
>sp|P67118|Y1528_MYCBO TVP38/TMEM64 family membrane protein Mb1528c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb1528c PE=3 SV=1
Length = 252
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 39 IREWSDRLGVWAIPVFVGFHTLTIALCLPYAVFFEAAASLLFGFFPAVLCVFSAKLLGAS 98
+R+W+ LG W F+ HT+ P F AA LLFG +V+ VF A ++G++
Sbjct: 57 LRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTA-FTLAAGLLFG---SVVGVFIA-VVGST 111
Query: 99 LSFWIGRLVFKSSNSAMEWAQRNKYFHILSRGVEKDGWKFVVLARFSP-MPSYVINYALA 157
S I L+ +++ + R + + L + + GW ++ R P +P INYA
Sbjct: 112 ASAVIAMLLVRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAG 171
Query: 158 ATNVGFVVDFLLPTIIGCLP 177
A+ V ++ F T+ G LP
Sbjct: 172 ASGV-RILSFAWATLAGLLP 190
>sp|P67117|Y1491_MYCTU TVP38/TMEM64 family membrane protein Rv1491c/MT1538
OS=Mycobacterium tuberculosis GN=Rv1491c PE=3 SV=1
Length = 252
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 39 IREWSDRLGVWAIPVFVGFHTLTIALCLPYAVFFEAAASLLFGFFPAVLCVFSAKLLGAS 98
+R+W+ LG W F+ HT+ P F AA LLFG +V+ VF A ++G++
Sbjct: 57 LRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTA-FTLAAGLLFG---SVVGVFIA-VVGST 111
Query: 99 LSFWIGRLVFKSSNSAMEWAQRNKYFHILSRGVEKDGWKFVVLARFSP-MPSYVINYALA 157
S I L+ +++ + R + + L + + GW ++ R P +P INYA
Sbjct: 112 ASAVIAMLLVRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAG 171
Query: 158 ATNVGFVVDFLLPTIIGCLP 177
A+ V ++ F T+ G LP
Sbjct: 172 ASGV-RILSFAWATLAGLLP 190
>sp|A1CIM4|TVP38_ASPCL Golgi apparatus membrane protein tvp38 OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=tvp38 PE=3 SV=1
Length = 419
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 72 FEAAASLLFGFFPAVLCVFSAKLLGASLSFWIGRLVF-KSSNSAMEWAQRNKYFHILSRG 130
F A +FG + L +A +LG++ SF + R V K N ME R+K F L+
Sbjct: 145 FGTVAGFIFGIWKGWLLYATATVLGSTCSFIVSRTVLSKFVNRMME---RDKRFAALALT 201
Query: 131 VEKDGWKFVVLARFSPMPSYVINYALA 157
++ DG K + + R P+P V N A++
Sbjct: 202 LKYDGLKLLCMIRLCPLPYSVCNGAVS 228
>sp|A2Q9P2|TVP38_ASPNC Golgi apparatus membrane protein tvp38 OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=tvp38 PE=3 SV=2
Length = 415
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 72 FEAAASLLFGFFPAVLCVFSAKLLGASLSFWIGRLVFKSSNSAMEWAQRNKYFHILSRGV 131
F A +FG + L SA +LG++ SF + R + S +R+K F LS +
Sbjct: 144 FGTMAGYIFGIWKGWLLYASATVLGSTCSFIVSRTIL--SKFVHRLMERDKRFAALSLTL 201
Query: 132 EKDGWKFVVLARFSPMPSYVINYALA 157
+ DG K + + R P+P V N A++
Sbjct: 202 KYDGLKLLCMIRLCPLPYSVCNGAVS 227
>sp|Q5B7A1|TVP38_EMENI Golgi apparatus membrane protein tvp38 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=tvp38 PE=3 SV=1
Length = 410
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 29/168 (17%)
Query: 3 MGKWLKIGMVVGVIAIIREVSKHYGFGFDKDTGIKAIREWSDRLGVWAIPVFVGF-HTLT 61
M W K+G V+ V+++ GFGF TG R+ W PV + H++
Sbjct: 76 MTFWQKVGSVLAVLSL-----NILGFGFLYITG---------RVFQWLGPVAEKWEHSVP 121
Query: 62 IALCLPYAVFFEAAASL------------LFGFFPAVLCVFSAKLLGASLSFWIGRLVFK 109
+ + + VFF + L +FG + L SA +LG+ SF R V
Sbjct: 122 VFIVMWLGVFFVSFPPLVGWSTFGTVSGFIFGVWKGWLLYASATVLGSICSFIASRTVL- 180
Query: 110 SSNSAMEWAQRNKYFHILSRGVEKDGWKFVVLARFSPMPSYVINYALA 157
S +R+K F L+ ++ DG K + + R P+P + N A++
Sbjct: 181 -SKFVHRLVERDKRFAALALTLKYDGLKLLCMIRLCPLPYSICNGAIS 227
>sp|A1CW44|TVP38_NEOFI Golgi apparatus membrane protein tvp38 OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=tvp38 PE=3 SV=1
Length = 418
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 72 FEAAASLLFGFFPAVLCVFSAKLLGASLSFWIGRLVF-KSSNSAMEWAQRNKYFHILSRG 130
F A +FG + + +A +LG++ SF + R + K N ME R+K F L+
Sbjct: 144 FGTIAGFIFGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMME---RDKRFAALALT 200
Query: 131 VEKDGWKFVVLARFSPMPSYVINYALA 157
++ DG K + + R P+P V N A++
Sbjct: 201 LKYDGLKLLCMIRLCPLPYSVCNGAVS 227
>sp|Q0CT01|TVP38_ASPTN Golgi apparatus membrane protein tvp38 OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=tvp38 PE=3 SV=1
Length = 418
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 72 FEAAASLLFGFFPAVLCVFSAKLLGASLSFWIGRLVFKSSNSAMEWAQRNKYFHILSRGV 131
F A +FG + L SA +LG++ SF + R + S +R+K F L+ +
Sbjct: 145 FGTVAGYIFGVWKGWLLYASATVLGSTASFIVSRTIL--SKFVHRLMERDKRFAALALTL 202
Query: 132 EKDGWKFVVLARFSPMPSYVINYALAATNVGFVVDFLLPTIIGCLPMILQNTSIGS 187
+ DG K + + R P+P V N A++ + + L T I P +L IG+
Sbjct: 203 KYDGLKLLCMIRLCPLPYSVCNGAVSTFPTVHPLTYGLATAI-ITPKLLVPAFIGN 257
>sp|Q2UUJ9|TVP38_ASPOR Golgi apparatus membrane protein tvp38 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=tvp38 PE=3 SV=2
Length = 414
Score = 39.3 bits (90), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 72 FEAAASLLFGFFPAVLCVFSAKLLGASLSFWIGRLVF-KSSNSAMEWAQRNKYFHILSRG 130
F + +FG + SA +LG++ SF + R + K N ME R+K F L+
Sbjct: 142 FGTISGYIFGVWKGWFLYASATVLGSTCSFVVSRTILSKFVNRMME---RDKRFAALALT 198
Query: 131 VEKDGWKFVVLARFSPMPSYVINYALAA 158
++ DG K + + R P+P V N A++
Sbjct: 199 LKYDGLKLLCMIRLCPLPYSVCNGAVST 226
>sp|B0Y4Q5|TVP38_ASPFC Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=tvp38 PE=3
SV=1
Length = 418
Score = 38.5 bits (88), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 72 FEAAASLLFGFFPAVLCVFSAKLLGASLSFWIGRLVF-KSSNSAMEWAQRNKYFHILSRG 130
F + ++G + + +A +LG++ SF + R + K N ME R+K F L+
Sbjct: 144 FGTISGFIYGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMME---RDKRFAALALT 200
Query: 131 VEKDGWKFVVLARFSPMPSYVINYALAA 158
++ DG K + + R P+P V N A++
Sbjct: 201 LKYDGLKLLCMIRLCPLPYSVCNGAVST 228
>sp|Q4WQJ2|TVP38_ASPFU Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=tvp38 PE=3 SV=1
Length = 418
Score = 38.5 bits (88), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 72 FEAAASLLFGFFPAVLCVFSAKLLGASLSFWIGRLVF-KSSNSAMEWAQRNKYFHILSRG 130
F + ++G + + +A +LG++ SF + R + K N ME R+K F L+
Sbjct: 144 FGTISGFIYGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMME---RDKRFAALALT 200
Query: 131 VEKDGWKFVVLARFSPMPSYVINYALAA 158
++ DG K + + R P+P V N A++
Sbjct: 201 LKYDGLKLLCMIRLCPLPYSVCNGAVST 228
>sp|A6RIB9|TVP38_BOTFB Golgi apparatus membrane protein tvp38 OS=Botryotinia fuckeliana
(strain B05.10) GN=tvp38 PE=3 SV=1
Length = 392
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 29/173 (16%)
Query: 40 REWSDRLGVW----------AIPVFVGFH-TLTIALCLPYAVFFEAAASLLFGFFPAVLC 88
W D G W A P +G+ T+TIA ++G
Sbjct: 120 ERWRDMRGGWMILWAMTFVAAFPPLIGYSSTITIA-------------GFVYGVPKGWAI 166
Query: 89 VFSAKLLGASLSFWIGRLVFKSSNSAMEWAQRNKYFHILSRGVEKDGWKFVVLARFSPMP 148
V SA + G+ SF R + S+ ++K F L+ ++ DG K + + R P+P
Sbjct: 167 VASATVAGSLCSFLASRTIL--SSYVHRLVGKDKRFEALALTLKHDGIKILCMIRLCPLP 224
Query: 149 SYVINYALAATNVGFVVDFLLPTIIGCLPMILQ---NTSIGSLAGAAVASASS 198
+ N A+A +++ L T + + + + +GSLAG AS+
Sbjct: 225 YSLSNAAVATFPTVHPLNYALATALVTPKLFIHVFIGSRLGSLAGDEEMDAST 277
>sp|A8NX72|TVP38_COPC7 Golgi apparatus membrane protein TVP38 OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
GN=TVP38 PE=3 SV=1
Length = 294
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 15/110 (13%)
Query: 50 AIPVFVGFHTLTIALCLPYAVFFEAAASLLFGFFPAVLCVFSAKLLGASLSFWIGRLVFK 109
+ P +G HT + LC A + GF+ A F+ +LG++L F + R +F
Sbjct: 88 SFPPLIG-HTTLVTLC--------GFAYGMKGFYIA----FAGSILGSALVFVVLRFLF- 133
Query: 110 SSNSAMEWAQRNKYFHILSRGVEKDGWKFVVLARFSPMPSYVINYALAAT 159
+ W+ +N+ + L V G +VL R SP P +V +L A+
Sbjct: 134 -TEKIRSWSAQNEKWQALEAVVRSKGLPLIVLIRVSPFPPWVYANSLFAS 182
>sp|P06568|YTXB_BACSU TVP38/TMEM64 family membrane protein YtxB OS=Bacillus subtilis
(strain 168) GN=ytxB PE=3 SV=1
Length = 213
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 37 KAIREWSDRLGVWAIPVFVGFHTLTIALCLPYAVFFEAAASLLFGFFPAVLCVFSAKLLG 96
K IR W GV+A +F+G + + P +V A L FG L +
Sbjct: 32 KEIRVWVLSFGVFAPLMFIGISIVRPLVLFPVSVI-SIAGGLAFGPLLGTLYTLFGSMCA 90
Query: 97 ASLSFWIGRLVFKSSNSAMEWAQRNKYFHILSRGVEKDGWKFVVLARFSPMPSYVINYAL 156
+++SF+ L N E + + + +E +G+ ++ L R P+ ++YA
Sbjct: 91 SAVSFFAAGLFSAKKNGHYERLEA------IQKQMEDNGFFYIFLLRILPINFDFVSYAA 144
Query: 157 AATNVGFVVDFLLPTIIGCLPMILQNTSIGS--LAG 190
+NV + + T +G +P + +G+ LAG
Sbjct: 145 GLSNVK-ALPYFAATAVGIIPGTIALNVLGASFLAG 179
>sp|A7EFY0|TVP38_SCLS1 Golgi apparatus membrane protein tvp38 OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=tvp38 PE=3 SV=1
Length = 393
Score = 35.0 bits (79), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 29/165 (17%)
Query: 40 REWSDRLGVW----------AIPVFVGFH-TLTIALCLPYAVFFEAAASLLFGFFPAVLC 88
W D G W A P +G+ T+TIA ++G
Sbjct: 121 ERWRDLPGGWMILWAMTFVAAFPPLIGYSSTITIA-------------GFVYGVPKGWAI 167
Query: 89 VFSAKLLGASLSFWIGRLVFKSSNSAMEWAQRNKYFHILSRGVEKDGWKFVVLARFSPMP 148
V ++ + G++ SF R + S ++K F L+ ++ DG K + + R P+P
Sbjct: 168 VATSTVAGSTCSFLASRTIL--STYVHRLVGKDKRFEALALTLKHDGIKILCMIRLCPLP 225
Query: 149 SYVINYALAATNVGFVVDFLLPTIIGCLPMILQ---NTSIGSLAG 190
+ N A+A +++ L T + + + + +GSLAG
Sbjct: 226 YSLSNAAVATFPTVHPLNYALATALVTPKLFIHVFIGSRLGSLAG 270
>sp|Q6BQJ1|TVP38_DEBHA Golgi apparatus membrane protein TVP38 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=TVP38 PE=3 SV=1
Length = 383
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 76 ASLLFGFFPAVLCVFSAKLLGASLSFWIGRLVFKSSNSAMEWAQRNKYFHILSRGVEKDG 135
A +++GF + + A + G+ SF + R + S A NK F S + +D
Sbjct: 124 AGMVYGFVHGWILLACASISGSFCSFLVFRYLLHSR--AERLMNSNKKFRAFSEILREDS 181
Query: 136 WKFV-VLARFSPMPSYVINYALAA 158
F+ VL R P+P + N ALAA
Sbjct: 182 SLFILVLLRLCPLPYSLSNGALAA 205
>sp|Q6YI46|TMM64_HUMAN Transmembrane protein 64 OS=Homo sapiens GN=TMEM64 PE=1 SV=2
Length = 380
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 70 VFFEAAASLLFGFFPAVLCVFSAKLLGASLSFWIGRLVFKSSNSAMEWA--QRNKYFHIL 127
+ AA L+GF + ++G + +I +V K +A A Q ++ +
Sbjct: 179 IVLNVAAGYLYGFVLGM----GLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAV 234
Query: 128 SRGVEK-DGWKFVVLARFSPMPSYVINYALAATNVGFVVDFLLPTIIGCLPMILQNTSIG 186
R VE G K V LAR +P+P + N + T++ ++L+ + +G LP L N+ +G
Sbjct: 235 IRVVEGGSGLKVVALARLTPIPFGLQNAVFSITDLSL-PNYLMASSVGLLPTQLLNSYLG 293
Query: 187 S 187
+
Sbjct: 294 T 294
>sp|P0ABP6|DEDA_ECOLI Protein DedA OS=Escherichia coli (strain K12) GN=dedA PE=1 SV=1
Length = 219
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 86 VLCVFSAKLLGASLSFWIGRL----VFKSSNSAMEWAQRNKYFHILSRGVEKDGWKFVVL 141
V+ + A ++G ++++ IGRL +F + NS + R Y + EK G K ++L
Sbjct: 75 VVLMLIAAIVGDAVNYTIGRLFGEKLFSNPNSKI---FRRSYLDKTHQFYEKHGGKTIIL 131
Query: 142 ARFSPM 147
ARF P+
Sbjct: 132 ARFVPI 137
>sp|P0ABP7|DEDA_ECO57 Protein DedA OS=Escherichia coli O157:H7 GN=dedA PE=3 SV=1
Length = 219
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 86 VLCVFSAKLLGASLSFWIGRL----VFKSSNSAMEWAQRNKYFHILSRGVEKDGWKFVVL 141
V+ + A ++G ++++ IGRL +F + NS + R Y + EK G K ++L
Sbjct: 75 VVLMLIAAIVGDAVNYTIGRLFGEKLFSNPNSKI---FRRSYLDKTHQFYEKHGGKTIIL 131
Query: 142 ARFSPM 147
ARF P+
Sbjct: 132 ARFVPI 137
>sp|Q69T94|PT110_ORYSJ Probable inorganic phosphate transporter 1-10 OS=Oryza sativa
subsp. japonica GN=PHT1-10 PE=2 SV=1
Length = 552
Score = 32.0 bits (71), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 196 ASSSWKSQVWSYLFPLLGIVSSILISFRIKKYSTDITVAES-PSDIVADSSHGKTGREGL 254
+S+ ++SQ++ LFP G++++ +F + K+ I VA + P VA + GR L
Sbjct: 312 SSTLFQSQIYRPLFPAPGLINAFQEAFNVAKFQAVIAVASTIPGYFVAVLLIDRVGRRCL 371
Query: 255 KKS 257
+ +
Sbjct: 372 QMA 374
>sp|Q3U145|TMM64_MOUSE Transmembrane protein 64 OS=Mus musculus GN=Tmem64 PE=2 SV=1
Length = 381
Score = 31.2 bits (69), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 70 VFFEAAASLLFGFFPAVLCVFSAKLLGASLSFWIGRLVFKSSNSAMEWAQRNKYFHILSR 129
+ AA L+GF + + L+G ++ + + + + +A Q + + R
Sbjct: 180 IVLNVAAGYLYGFVLGMGLMVVGVLIGTFIAHVVCKRLLTAWVAAR--IQNSDKLSAVIR 237
Query: 130 GVEK-DGWKFVVLARFSPMPSYVINYALAATNVGFVVDFLLPTIIGCLPMILQNTSIGS 187
VE G K V LAR +P+P + N + T+V +L+ + G LP L N+ +G+
Sbjct: 238 VVEGGSGLKVVALARLTPIPFGLQNAVFSITDVPL-PSYLMASSAGLLPTQLLNSYLGT 295
>sp|Q8L586|Y4958_ARATH Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana
GN=At4g09580 PE=1 SV=1
Length = 287
Score = 31.2 bits (69), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 17/133 (12%)
Query: 85 AVLCVFSAKLLGASLSFWIGRLVFKSSNSAMEWAQRNKYFHILSRGVEKDGWKFVVLARF 144
A C F +KL+G L W+ W ++ ++F +++ R
Sbjct: 158 ACSCFFLSKLVGRPLVNWL-------------WPEKLRFFQAEIAKRRDRLLNYMLFLRI 204
Query: 145 SP-MPSYVINYALAATNVGFVVDFLLPTIIGCLPMILQNTSIGSLAGAAVASASSSWKSQ 203
+P +P+ IN + ++ F V F L T++G +P G LA + S + +
Sbjct: 205 TPTLPNLFINLSSPIVDIPFHV-FFLATLVGLMPASYITVRAG-LALGDLRSVKDLYDFK 262
Query: 204 VWSYLFPLLGIVS 216
S LF L+G +S
Sbjct: 263 TLSVLF-LIGSIS 274
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,450,486
Number of Sequences: 539616
Number of extensions: 3516150
Number of successful extensions: 11848
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 11826
Number of HSP's gapped (non-prelim): 49
length of query: 258
length of database: 191,569,459
effective HSP length: 115
effective length of query: 143
effective length of database: 129,513,619
effective search space: 18520447517
effective search space used: 18520447517
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)