Your job contains 1 sequence.
>025077
MSNSPGLYIDIGKKARDLLYKDYGDKQPANHFRYDCVDSNFDVSCQCDAIVPGLSTAFRS
IIPDSGGVELRYLHDYAGFTAGIGLKAGRHNHLQSVGLDRIVKFSVVAGNTVLSLGTDAA
FDISTRTFSNYNAGLSFNTALFNASVNLNDKLENLRASYYQELVPLTRTAVAAELKHSFS
NHRSISDNIPIPTSLTVGFQHGLFPSTLVKVRVNTNGKVGAHVQQSFWQKFSIAVSGETD
IRASSWIPNVRFGMAFSS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025077
(258 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2100252 - symbol:VDAC1 "voltage dependent anio... 345 9.4e-40 2
TAIR|locus:2147820 - symbol:VDAC3 "voltage dependent anio... 311 1.7e-36 2
TAIR|locus:2174517 - symbol:VDAC4 "voltage dependent anio... 230 6.4e-26 2
TAIR|locus:2097425 - symbol:VDAC5 "voltage dependent anio... 171 2.8e-20 2
POMBASE|SPBC27B12.13 - symbol:tom40 "mitochondrial TOM co... 121 5.5e-05 1
TAIR|locus:2151749 - symbol:AT5G37610 species:3702 "Arabi... 105 0.00038 1
>TAIR|locus:2100252 [details] [associations]
symbol:VDAC1 "voltage dependent anion channel 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA;ISS] [GO:0006820 "anion transport" evidence=IEA;ISS]
[GO:0008308 "voltage-gated anion channel activity"
evidence=IEA;ISS;IMP] [GO:0044070 "regulation of anion transport"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005773 "vacuole" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0005794
"Golgi apparatus" evidence=RCA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0051788 "response to misfolded
protein" evidence=RCA] [GO:0080129 "proteasome core complex
assembly" evidence=RCA] InterPro:IPR001925 InterPro:IPR027246
Pfam:PF01459 PROSITE:PS00558 GO:GO:0005739 GO:GO:0005886
GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009617
GO:GO:0006952 GO:GO:0005741 GO:GO:0009941 GO:GO:0015288
GO:GO:0046930 Gene3D:2.40.160.10 InterPro:IPR023614 EMBL:AC010676
GO:GO:0008308 EMBL:AY037217 EMBL:AY113169 IPI:IPI00547971
RefSeq:NP_186777.1 UniGene:At.24885 IntAct:Q9SRH5 MINT:MINT-7046723
STRING:Q9SRH5 PaxDb:Q9SRH5 PRIDE:Q9SRH5 ProMEX:Q9SRH5 DNASU:820914
EnsemblPlants:AT3G01280.1 GeneID:820914 KEGG:ath:AT3G01280
GeneFarm:2071 TAIR:At3g01280 eggNOG:NOG243169 HOGENOM:HOG000238012
InParanoid:Q9SRH5 KO:K15040 OMA:DYHTDQK PhylomeDB:Q9SRH5
ProtClustDB:CLSN2915593 Genevestigator:Q9SRH5 GermOnline:AT3G01280
Uniprot:Q9SRH5
Length = 276
Score = 345 (126.5 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 97/261 (37%), Positives = 133/261 (50%)
Query: 4 SP-GLYI-DIGKKARDLLYKDYGDKQPANHFRYD---CVDSNFDVSCQCDAIVPGLSTAF 58
SP G+ I G K DLL D + + D C DS F ++ D PGL + F
Sbjct: 35 SPAGVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIF 94
Query: 59 RSIIPD--SGGVELRYLHDYAGFTAGIGLKAGRHNHLQSVGLDRIVKFSVVAGNTVLSLG 116
+PD SG VEL+YLH+YAG + +GL + V FS V G+ VL++G
Sbjct: 95 SFKVPDQNSGKVELQYLHEYAGISTSMGLTQ-----------NPTVNFSGVIGSNVLAVG 143
Query: 117 TDAAFDISTRTFSNYNAGLSFNTALFNASVNLNDKLENLRASYYQELVPLTRTAVAAELK 176
TD +FD + F+ NAGLSF AS+ +NDK + L ASYY + PL TAV AE+
Sbjct: 144 TDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTAVGAEVS 203
Query: 177 HSFSNHRSISDNIPIPTSLTVGFQHGLFPSTLVKVRVNTNGKVGAHVQQSFWQKFSIAVS 236
H S+ S ++TVG QH L P T VK RVN+ G A +Q + K +S
Sbjct: 204 HKLSSKDS---------TITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFFTIS 254
Query: 237 GETDIRASSWIPNVRFGMAFS 257
GE D ++ + + G+A +
Sbjct: 255 GEVDTKSID--KSAKVGLALA 273
Score = 95 (38.5 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 18/27 (66%), Positives = 20/27 (74%)
Query: 1 MSNSPGLYIDIGKKARDLLYKDYGDKQ 27
M PGLY +IGKKARDLLYKD+ Q
Sbjct: 1 MVKGPGLYTEIGKKARDLLYKDHNSDQ 27
>TAIR|locus:2147820 [details] [associations]
symbol:VDAC3 "voltage dependent anion channel 3"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA;ISS] [GO:0006820 "anion transport" evidence=IEA;ISS]
[GO:0008308 "voltage-gated anion channel activity"
evidence=IEA;ISS;IMP] [GO:0044070 "regulation of anion transport"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0042742 "defense response
to bacterium" evidence=IEP] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009617
"response to bacterium" evidence=IEP] [GO:0009060 "aerobic
respiration" evidence=IMP] [GO:0009409 "response to cold"
evidence=IMP] [GO:0010029 "regulation of seed germination"
evidence=IMP] InterPro:IPR001925 InterPro:IPR027246 Pfam:PF01459
PROSITE:PS00558 GO:GO:0005739 GO:GO:0005886 GO:GO:0005774
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0005730
GO:GO:0005741 GO:GO:0009409 GO:GO:0042742 GO:GO:0009941
GO:GO:0009626 GO:GO:0009060 GO:GO:0010029 GO:GO:0015288
GO:GO:0046930 Gene3D:2.40.160.10 InterPro:IPR023614 EMBL:AL391146
GO:GO:0008308 eggNOG:NOG243169 HOGENOM:HOG000238012 KO:K15040
EMBL:AJ131391 EMBL:AY063891 EMBL:AY122918 EMBL:AY085248
IPI:IPI00518377 PIR:T51454 RefSeq:NP_001190314.1 RefSeq:NP_197013.1
UniGene:At.24654 ProteinModelPortal:Q9SMX3 SMR:Q9SMX3 IntAct:Q9SMX3
STRING:Q9SMX3 PaxDb:Q9SMX3 PRIDE:Q9SMX3 ProMEX:Q9SMX3
EnsemblPlants:AT5G15090.1 EnsemblPlants:AT5G15090.2 GeneID:831361
KEGG:ath:AT5G15090 GeneFarm:2035 TAIR:At5g15090 InParanoid:Q9SMX3
OMA:KSFFTVS PhylomeDB:Q9SMX3 ProtClustDB:CLSN2916837
Genevestigator:Q9SMX3 GermOnline:AT5G15090 Uniprot:Q9SMX3
Length = 274
Score = 311 (114.5 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 90/247 (36%), Positives = 120/247 (48%)
Query: 3 NSPGLYIDI-GKKARDLLYKDYGDKQPANHFRYDC---VDSNFDVSCQCDAIVPGLSTAF 58
+S G+ I G L D + N+F D DS+ + D PGL
Sbjct: 35 SSTGVAITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIV 94
Query: 59 RSIIPD--SGGVELRYLHDYAGFTAGIGLKAGRHNHLQSVGLDRIVKFSVVAGNTVLSLG 116
++ +PD SG E++Y HDYAG + +G A IV FS V G LSLG
Sbjct: 95 QAKLPDHKSGKAEVQYFHDYAGISTSVGFTA-----------TPIVNFSGVVGTNGLSLG 143
Query: 117 TDAAFDISTRTFSNYNAGLSFNTALFNASVNLNDKLENLRASYYQELVPLTRTAVAAELK 176
TD A++ + F ++NAG +F AS+ LNDK E L ASYYQ + P T V AE+
Sbjct: 144 TDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASYYQIVSP--STVVGAEIS 201
Query: 177 HSFSNHRSISDNIPIPTSLTVGFQHGLFPSTLVKVRVNTNGKVGAHVQQSFWQKFSIAVS 236
H+F+ +N ++TVG QH L P T VK RVN G A +Q + K VS
Sbjct: 202 HNFTT----KEN-----AITVGTQHALDPLTTVKARVNNAGVANALIQHEWRPKSFFTVS 252
Query: 237 GETDIRA 243
GE D +A
Sbjct: 253 GEVDSKA 259
Score = 98 (39.6 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 1 MSNSPGLYIDIGKKARDLLYKDY-GDKQ 27
M PGLY +IGKKARDLLY+DY GD++
Sbjct: 1 MVKGPGLYTEIGKKARDLLYRDYQGDQK 28
>TAIR|locus:2174517 [details] [associations]
symbol:VDAC4 "voltage dependent anion channel 4"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA;ISS] [GO:0006820 "anion transport" evidence=IEA;ISS]
[GO:0008308 "voltage-gated anion channel activity"
evidence=IEA;ISS;IMP] [GO:0044070 "regulation of anion transport"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0009617 "response to bacterium" evidence=IEP]
InterPro:IPR027246 Pfam:PF01459 PROSITE:PS00558 GO:GO:0005739
GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009617
GO:GO:0005741 GO:GO:0040008 GO:GO:0015288 GO:GO:0046930
EMBL:AB011482 Gene3D:2.40.160.10 InterPro:IPR023614 GO:GO:0008308
HOGENOM:HOG000238012 eggNOG:NOG314866 EMBL:AY034928 EMBL:AY059112
EMBL:AY086306 IPI:IPI00520379 RefSeq:NP_200557.1 UniGene:At.23756
ProteinModelPortal:Q9FKM2 SMR:Q9FKM2 PaxDb:Q9FKM2 PRIDE:Q9FKM2
DNASU:835853 EnsemblPlants:AT5G57490.1 GeneID:835853
KEGG:ath:AT5G57490 TAIR:At5g57490 InParanoid:Q9FKM2 OMA:SGGHLET
PhylomeDB:Q9FKM2 ProtClustDB:CLSN2687419 Genevestigator:Q9FKM2
Uniprot:Q9FKM2
Length = 274
Score = 230 (86.0 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 72/253 (28%), Positives = 118/253 (46%)
Query: 8 YIDIGKKARDLLYKDYGDKQPANHFRYDC-VDSNFDVSCQCDA--IVPGLSTAFRSIIPD 64
++ G K D + D + D +DS+ VS + ++P IPD
Sbjct: 41 FVATGLKKDDFFFGDISTLYKGQNTIVDLKIDSHSSVSTKVTLKNLLPSAKAVISFKIPD 100
Query: 65 --SGGVELRYLHDYAGFTAGIGLKAGRHNHLQSVGLDRIVKFSVVAGNTVLSLGTDAAFD 122
SG ++++Y+H +A + IGL ++ S G+ + LG + +FD
Sbjct: 101 HKSGKLDVQYVHPHATLNSSIGLNP-----------TPLLDLSATIGSQNVCLGGEVSFD 149
Query: 123 ISTRTFSNYNAGLSFNTALFNASVNLNDKLENLRASYYQELVPLTRTAVAAELKHSFSNH 182
++ + + YNAG+ FN +A++ L DK E+LRA+Y + P T + AEL FSN+
Sbjct: 150 TASSSLTKYNAGIGFNNQGVSAALILEDKGESLRATYVHTVNPTT--SFGAELIRRFSNY 207
Query: 183 RSISDNIPIPTSLTVGFQHGLFPSTLVKVRVNTNGKVGAHVQQSFWQKFSIAVSGETDIR 242
+ S TVG H + T+VK R + +GK G VQ+ + K I S E D +
Sbjct: 208 NN---------SFTVGSSHSVDQFTVVKTRFSNSGKAGMVVQREWRPKSHITFSAEYDSK 258
Query: 243 ASSWIPNVRFGMA 255
A + P + +A
Sbjct: 259 AVTSSPKLGLALA 271
Score = 78 (32.5 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 15/23 (65%), Positives = 18/23 (78%)
Query: 1 MSNSPGLYIDIGKKARDLLYKDY 23
M +SP + DIGKKA+DLL KDY
Sbjct: 1 MGSSPAPFADIGKKAKDLLNKDY 23
>TAIR|locus:2097425 [details] [associations]
symbol:VDAC5 "voltage dependent anion channel 5"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA;ISS] [GO:0006820 "anion transport" evidence=IEA;ISS]
[GO:0008308 "voltage-gated anion channel activity"
evidence=IEA;ISS] [GO:0044070 "regulation of anion transport"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
InterPro:IPR027246 Pfam:PF01459 PROSITE:PS00558 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 GO:GO:0005741 GO:GO:0015288
GO:GO:0046930 Gene3D:2.40.160.10 InterPro:IPR023614 GO:GO:0008308
eggNOG:NOG243169 HOGENOM:HOG000238012 IPI:IPI00524297 PIR:T46058
RefSeq:NP_190561.1 UniGene:At.53862 ProteinModelPortal:Q9M2W6
PRIDE:Q9M2W6 EnsemblPlants:AT3G49920.1 GeneID:824154
KEGG:ath:AT3G49920 TAIR:At3g49920 InParanoid:Q9M2W6 OMA:DTTSRTF
PhylomeDB:Q9M2W6 ArrayExpress:Q9M2W6 Genevestigator:Q9M2W6
Uniprot:Q9M2W6
Length = 226
Score = 171 (65.3 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 54/164 (32%), Positives = 82/164 (50%)
Query: 96 VGLDRIVKFSVVAGNTVLSL--GTDAAFDISTRTFSNYNAGLSFNTALFNASVNLNDKLE 153
+ D VK V N +S+ T +D ++RTF+ YN G+S S+ L DK +
Sbjct: 71 IDTDFNVKSLVYPMNKFVSIDHNTLTGYDTTSRTFTKYNVGVSVTKPDQCVSIILGDKGD 130
Query: 154 NLRASYYQELVPLTRTAVAAELKHSFSNHRSISDNIPIPTSLTVGFQHGLFPSTLVKVRV 213
+++ASY L TR+A E+ R IS N T++TVG + + T VK ++
Sbjct: 131 SIKASYVYYLDESTRSATVGEVI------RKISTN---ETTVTVGGLYAVDHLTNVKAKL 181
Query: 214 NTNGKVGAHVQQSFWQKFSIAVSGETDIRASSWIPNVRFGMAFS 257
N+NGK GA +Q K + +SGE D + P R G++ S
Sbjct: 182 NSNGKFGALLQHEGLPKSIVTISGEIDTKTLDKYP--RLGLSLS 223
Score = 83 (34.3 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 1 MSNSPGLYIDIGKKARDLLYKDYGDKQ 27
MS PGL+ DIGK A+DLL +DY Q
Sbjct: 1 MSKGPGLFADIGKYAKDLLTRDYSTDQ 27
>POMBASE|SPBC27B12.13 [details] [associations]
symbol:tom40 "mitochondrial TOM complex subunit Tom40
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005742 "mitochondrial outer
membrane translocase complex" evidence=ISS] [GO:0006811 "ion
transport" evidence=IEA] [GO:0015266 "protein channel activity"
evidence=IEA] [GO:0015288 "porin activity" evidence=IEA]
[GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane
transporter activity" evidence=ISS] [GO:0030150 "protein import
into mitochondrial matrix" evidence=ISS] [GO:0045039 "protein
import into mitochondrial inner membrane" evidence=ISS] [GO:0046930
"pore complex" evidence=IEA] InterPro:IPR005686 InterPro:IPR027246
Pfam:PF01459 PomBase:SPBC27B12.13 EMBL:CU329671
GenomeReviews:CU329671_GR EMBL:AB004538 GO:GO:0015288 GO:GO:0046930
GO:GO:0030150 Gene3D:2.40.160.10 InterPro:IPR023614 GO:GO:0045039
GO:GO:0008308 GO:GO:0005742 GO:GO:0015450 eggNOG:NOG275568
KO:K11518 OMA:MCQLEQD HOGENOM:HOG000200591 OrthoDB:EOG4QRMCQ
TIGRFAMs:TIGR00989 PIR:T40037 RefSeq:NP_595546.2 STRING:O13656
PRIDE:O13656 EnsemblFungi:SPBC27B12.13.1 GeneID:2540506
KEGG:spo:SPBC27B12.13 NextBio:20801633 Uniprot:O13656
Length = 344
Score = 121 (47.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 45/173 (26%), Positives = 80/173 (46%)
Query: 74 HDYAGFTAGIGLKAGRHNHLQSVGLDRIVKFSVVAGNTV-LSLGTDAAFDISTRTFSNYN 132
HD+ G KA N L I S++ T LSLG +A + + +
Sbjct: 140 HDHKGKDFSFSFKA--MNPWYEEKLTGIYIISLLQSVTPKLSLGVEALWQKPSSSIGPEE 197
Query: 133 AGLSF----NTALFNASVNLNDKLENLRASYYQELVPLTRTAVAAELKHSFSNHRSISDN 188
A LS+ N A + A+ +LN ++ A+++++L P V +L NH +
Sbjct: 198 ATLSYMTRYNAADWIATAHLNGSQGDVTATFWRKLSPKVEAGVECQLSPVGLNHSAALMT 257
Query: 189 IPIPTSLT-VGFQHGLFPSTLVKVRVNTNGKVGAHVQQSFWQKFSIAVSGETD 240
P P LT VG ++ F ++ + +V++ G+VG ++++ ++A S E D
Sbjct: 258 GPKPEGLTSVGVKYE-FAQSIYRGQVDSKGRVGVYLERRLAPAITLAFSSELD 309
>TAIR|locus:2151749 [details] [associations]
symbol:AT5G37610 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006820 "anion
transport" evidence=IEA] [GO:0008308 "voltage-gated anion channel
activity" evidence=IEA] [GO:0044070 "regulation of anion transport"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
InterPro:IPR027246 Pfam:PF01459 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005741 Gene3D:2.40.160.10
InterPro:IPR023614 EMBL:AB018107 GO:GO:0008308 eggNOG:NOG243169
IPI:IPI00533329 RefSeq:NP_198577.1 UniGene:At.51071
ProteinModelPortal:Q9FHQ9 EnsemblPlants:AT5G37610.1 GeneID:833739
KEGG:ath:AT5G37610 TAIR:At5g37610 InParanoid:Q9FHQ9
PhylomeDB:Q9FHQ9 Genevestigator:Q9FHQ9 Uniprot:Q9FHQ9
Length = 163
Score = 105 (42.0 bits), Expect = 0.00038, P = 0.00038
Identities = 44/164 (26%), Positives = 71/164 (43%)
Query: 96 VGL--DRIVKFSVVAGNTVLSLGTDAAFDISTRTFSNYNAGLSFNTALFNASVNLNDKLE 153
VGL + I+ FS V GN G + D+ R + N LS T + +++ K
Sbjct: 12 VGLFANPILSFSAVFGNDFWRFGFELTLDLVNRIITKANTVLSLITEDTTTTFSIDKKAS 71
Query: 154 NLRASYYQELVPLTRTAVAAELKHSFSNHRSISDNIPIPTSLTVGFQHGLFPSTLVK--V 211
ASYYQ L ++T AE K+ S+ + S ++G +H L++ +
Sbjct: 72 LFTASYYQRLH--SKTVCGAEAKYILSDKSN---------SFSIGKRHLFGDDDLIQALL 120
Query: 212 RVNTNGKVGAHVQQSFWQKFSIAVSGETDIRASSWIPNVRFGMA 255
V+ G + Q + K ++GE + SS RFG+A
Sbjct: 121 SVSNGGSMRVLFQHHWTLKSFFTIAGERLLNHSSQ----RFGLA 160
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 258 258 0.00087 114 3 11 22 0.45 33
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 610 (65 KB)
Total size of DFA: 194 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.62u 0.08s 21.70t Elapsed: 00:00:02
Total cpu time: 21.62u 0.08s 21.70t Elapsed: 00:00:02
Start: Mon May 20 18:49:37 2013 End: Mon May 20 18:49:39 2013