BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025088
(258 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225426106|ref|XP_002272347.1| PREDICTED: 50S ribosomal protein L25 [Vitis vinifera]
gi|297742259|emb|CBI34408.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/260 (74%), Positives = 217/260 (83%), Gaps = 4/260 (1%)
Query: 1 MLIKITRSTLSKSLNLQLRCFSQAAAAILPDDP--SAPLTYLDGLPRPDPRYDETILAIP 58
MLI R L+ +L+L R FSQ+AAA + DP PLTYL+G PRPDP++ E I AIP
Sbjct: 1 MLIHRHRQILTNALHL--RHFSQSAAAAVLQDPLEPPPLTYLEGFPRPDPKFAEIIRAIP 58
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G +S KERK GRVPSIVFEQEDGQHGGNKRLISV+TNQIRKLV HLGRSFF+SRL
Sbjct: 59 RTISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVKTNQIRKLVNHLGRSFFLSRL 118
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
FDLEV F S ++IEKVRVLPRK+HLH+GTDA LNVTF+RAP ALLK+DVPLVFRG+D
Sbjct: 119 FDLEVGPHFESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVFRGED 178
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
VSPGL+KG YLNTIKRTVK+LCPADI+PPYIDVDLSELD QKI+ GDLKVHPALKLLRS
Sbjct: 179 VSPGLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKLLRS 238
Query: 239 KDEPVCKIAGGRASDQKKSK 258
KDEPVCKI G R SDQ+KSK
Sbjct: 239 KDEPVCKIMGTRVSDQRKSK 258
>gi|359476745|ref|XP_002276349.2| PREDICTED: 50S ribosomal protein L25-like [Vitis vinifera]
gi|297735240|emb|CBI17602.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/260 (74%), Positives = 218/260 (83%), Gaps = 4/260 (1%)
Query: 1 MLIKITRSTLSKSLNLQLRCFSQAAAAILPDDP--SAPLTYLDGLPRPDPRYDETILAIP 58
MLI R L+ +L+L R FSQ+AAA + DP PLTYL+G PRPDP++ E I AIP
Sbjct: 1 MLIHRHRQILTNALHL--RHFSQSAAAAVLQDPLEPPPLTYLEGFPRPDPKFAEIIRAIP 58
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G +S KERK GRVPSIVFEQEDGQHGGNKRLISV+TNQIRKLV HLGRSFF+SRL
Sbjct: 59 RTISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRL 118
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
FDLEV +F S ++IEKVRVLPRK+HLH+GTDA LNVTF+RAP ALLK+DVPLVFRG+D
Sbjct: 119 FDLEVGPDFESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVFRGED 178
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
VSPGL+KG YLNTIKRTVK+LCPADI+PPYIDVDLSELD QKI+ GDLKVHPALKLLRS
Sbjct: 179 VSPGLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKLLRS 238
Query: 239 KDEPVCKIAGGRASDQKKSK 258
KDEPVCKI G R SDQ+KSK
Sbjct: 239 KDEPVCKIMGTRVSDQRKSK 258
>gi|186701238|gb|ACC91264.1| 50S ribosomal protein [Capsella rubella]
Length = 257
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/251 (73%), Positives = 213/251 (84%), Gaps = 3/251 (1%)
Query: 8 STLSKSLNLQLRCFSQAAAAILPDDPS--APLTYLDGLPRPDPRYDETILAIPRASPGTR 65
+TL K+L LR FS AA A L D S LTYL G PRPDP+Y ETILA+PR+ G
Sbjct: 7 TTLPKTLQ-NLRLFSPAATAALALDHSLDTQLTYLPGFPRPDPKYAETILAVPRSVSGKS 65
Query: 66 VSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRS 125
+S KERKAGRVPSI+FEQEDGQHGGNKRL+SVQTNQIRKLV HLG SFF+SRLFD+EVR+
Sbjct: 66 ISAKERKAGRVPSIIFEQEDGQHGGNKRLVSVQTNQIRKLVTHLGYSFFLSRLFDVEVRA 125
Query: 126 EFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK 185
E GS ++IEKVR LPR +HLHSGTDAPLNVTF+RAPP ALLK+D+PLVF GDDVSPGL+K
Sbjct: 126 EIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSPGLKK 185
Query: 186 GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCK 245
G LNTIKRTVKFLCPA+I+PPYI+VDLS+LD+ QK++ GDLKVHPALKL++ KDEP+ K
Sbjct: 186 GASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPALKLIKPKDEPIVK 245
Query: 246 IAGGRASDQKK 256
IAGGR SDQ+K
Sbjct: 246 IAGGRVSDQQK 256
>gi|297799630|ref|XP_002867699.1| hypothetical protein ARALYDRAFT_492505 [Arabidopsis lyrata subsp.
lyrata]
gi|297313535|gb|EFH43958.1| hypothetical protein ARALYDRAFT_492505 [Arabidopsis lyrata subsp.
lyrata]
Length = 257
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/251 (72%), Positives = 213/251 (84%), Gaps = 3/251 (1%)
Query: 8 STLSKSLNLQLRCFSQAAAAILPDDPS--APLTYLDGLPRPDPRYDETILAIPRASPGTR 65
+TL K+L LR FS AA A L D + LTYL G PRPDP++ ETILA+PR+ G
Sbjct: 7 TTLPKTLQ-NLRLFSPAANAALSLDHTQETQLTYLPGFPRPDPKHAETILAVPRSVSGKS 65
Query: 66 VSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRS 125
+S KERKAGRVPSI+FEQEDGQHGGNKRLISVQTNQIRKLV HLG SFF+SRLFD+EVR+
Sbjct: 66 ISAKERKAGRVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFLSRLFDVEVRA 125
Query: 126 EFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK 185
E GS ++IEKVR LPR +HLHSGTDAPLNVTF+RAPP ALLK+D+PLVF GDDVSPGL+K
Sbjct: 126 EIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSPGLKK 185
Query: 186 GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCK 245
G LNTIKRTVKFLCPA+I+PPYI+VDLS+LD+ QK++ GDLKVHPALKL++SKDEP+ K
Sbjct: 186 GASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPALKLIKSKDEPIVK 245
Query: 246 IAGGRASDQKK 256
+AGGR SD +K
Sbjct: 246 VAGGRVSDTQK 256
>gi|15236554|ref|NP_194093.1| ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain-containing
protein [Arabidopsis thaliana]
gi|4454031|emb|CAA23028.1| putative protein [Arabidopsis thaliana]
gi|7269210|emb|CAB79317.1| putative protein [Arabidopsis thaliana]
gi|18253005|gb|AAL62429.1| putative protein [Arabidopsis thaliana]
gi|21389687|gb|AAM48042.1| putative protein [Arabidopsis thaliana]
gi|21594031|gb|AAM65949.1| unknown [Arabidopsis thaliana]
gi|332659385|gb|AEE84785.1| ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain-containing
protein [Arabidopsis thaliana]
Length = 264
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/252 (73%), Positives = 213/252 (84%), Gaps = 4/252 (1%)
Query: 9 TLSKSLNLQLRCFSQAAAAILPDD--PSAPLTYLDGLPRPDPRYDETILAIPRASPGTRV 66
TL K+L LR FS AA A L D LTYL G PRPDP++ ETILA+PR+ G +
Sbjct: 8 TLPKTLQ-NLRLFSPAANAALSLDHIQETQLTYLPGFPRPDPKHAETILAVPRSVSGKSI 66
Query: 67 SVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSE 126
S KERKAGRVPSI+FEQEDGQHGGNKRLISVQTNQIRKLV HLG SFF+SRLFD+EVR+E
Sbjct: 67 SAKERKAGRVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFLSRLFDVEVRAE 126
Query: 127 FGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKG 186
GS ++IEKVR LPR +HLHSGTDAPLNVTF+RAPP ALLK+D+PLVF GDDVSPGL+KG
Sbjct: 127 IGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSPGLKKG 186
Query: 187 GYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
LNTIKRTVKFLCPA+I+PPYI+VDLS+LD+ QK++ GDLKVHPALKL++SKDEP+ K+
Sbjct: 187 ASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPALKLIKSKDEPIVKV 246
Query: 247 AGGRASD-QKKS 257
AGGR +D QKKS
Sbjct: 247 AGGRVTDTQKKS 258
>gi|449437765|ref|XP_004136661.1| PREDICTED: 50S ribosomal protein L25-like [Cucumis sativus]
gi|449494761|ref|XP_004159639.1| PREDICTED: 50S ribosomal protein L25-like [Cucumis sativus]
Length = 260
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/257 (72%), Positives = 218/257 (84%), Gaps = 2/257 (0%)
Query: 2 LIKITRS-TLSKSLNLQLRCFSQAAAAILPDDPSAPL-TYLDGLPRPDPRYDETILAIPR 59
+++ RS TLS+ L + + A A D S PL +YL+G P+PDP+Y ETILAIPR
Sbjct: 1 MLRFYRSPTLSRVLLRRYSAATAPATAPAFDSVSEPLFSYLEGFPKPDPKYAETILAIPR 60
Query: 60 ASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLF 119
+ G +S KERKAGRVPSIVFEQEDGQHGGNKRLISV+TNQI KLV +LGRSFF+SRLF
Sbjct: 61 SISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF 120
Query: 120 DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDV 179
DLEV S+F SGD++EKVRVLPRK+HLH+GTDAPLNVTF+RAP A+LK+DVPLVFRG+DV
Sbjct: 121 DLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV 180
Query: 180 SPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSK 239
PGLRKG YLNTIKRTVK+LCPADI+PPYIDVDLSELDV QK++ GDLKVHPALKL++SK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK 240
Query: 240 DEPVCKIAGGRASDQKK 256
DEPVCKIAG R SDQ+K
Sbjct: 241 DEPVCKIAGARVSDQQK 257
>gi|334186857|ref|NP_001190814.1| ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain-containing
protein [Arabidopsis thaliana]
gi|332659386|gb|AEE84786.1| ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain-containing
protein [Arabidopsis thaliana]
Length = 277
Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 185/265 (69%), Positives = 214/265 (80%), Gaps = 17/265 (6%)
Query: 9 TLSKSLNLQLRCFSQAAAAILPDD--PSAPLTYLDGLPRPDPRYDETILAIPRASPGTRV 66
TL K+L LR FS AA A L D LTYL G PRPDP++ ETILA+PR+ G +
Sbjct: 8 TLPKTLQ-NLRLFSPAANAALSLDHIQETQLTYLPGFPRPDPKHAETILAVPRSVSGKSI 66
Query: 67 SVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSE 126
S KERKAGRVPSI+FEQEDGQHGGNKRLISVQTNQIRKLV HLG SFF+SRLFD+EVR+E
Sbjct: 67 SAKERKAGRVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFLSRLFDVEVRAE 126
Query: 127 FGSGDLIEKVRVLPR-------------KVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
GS ++IEKVR LPR K+HLHSGTDAPLNVTF+RAPP ALLK+D+PLV
Sbjct: 127 IGSDEVIEKVRALPRAVKSPFLSLMKLIKIHLHSGTDAPLNVTFIRAPPGALLKVDIPLV 186
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
F GDDVSPGL+KG LNTIKRTVKFLCPA+I+PPYI+VDLS+LD+ QK++ GDLKVHPAL
Sbjct: 187 FIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPAL 246
Query: 234 KLLRSKDEPVCKIAGGRASD-QKKS 257
KL++SKDEP+ K+AGGR +D QKKS
Sbjct: 247 KLIKSKDEPIVKVAGGRVTDTQKKS 271
>gi|356571771|ref|XP_003554046.1| PREDICTED: 50S ribosomal protein L25-like [Glycine max]
Length = 257
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 177/241 (73%), Positives = 204/241 (84%), Gaps = 1/241 (0%)
Query: 19 RCFSQAAAAILPDDPSAPLTYLDGLPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPS 78
R FS +AAA+L PLTYLDG PRPDP++DETILAIPRA G +S KER+AGR+PS
Sbjct: 17 RHFSHSAAAVLRPPGPEPLTYLDGFPRPDPKHDETILAIPRADSGKNISAKERRAGRLPS 76
Query: 79 IVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGS-GDLIEKVR 137
IVFEQEDGQHGGNKRLISV+T+QIRKLV HLGRSFF+SRLF L+VR+ F S D +E VR
Sbjct: 77 IVFEQEDGQHGGNKRLISVRTDQIRKLVNHLGRSFFLSRLFHLQVRAHFDSEDDFVETVR 136
Query: 138 VLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVK 197
VLPR +HL +GTDAPLNVTF+RAP ALLK+DVPLVFRG+DVSPGL+KG LNTIKRTVK
Sbjct: 137 VLPRAIHLKAGTDAPLNVTFIRAPSNALLKVDVPLVFRGEDVSPGLKKGASLNTIKRTVK 196
Query: 198 FLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRASDQKKS 257
+LCPADI+PPYIDVDLSELDV QK++ GDLKVHPALKLL+S+DE V KI G R S+ +K
Sbjct: 197 YLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSRDEAVVKIMGQRVSELQKK 256
Query: 258 K 258
K
Sbjct: 257 K 257
>gi|356560821|ref|XP_003548685.1| PREDICTED: 50S ribosomal protein L25-like isoform 1 [Glycine max]
Length = 257
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 177/241 (73%), Positives = 205/241 (85%), Gaps = 1/241 (0%)
Query: 19 RCFSQAAAAILPDDPSAPLTYLDGLPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPS 78
R FS +AAA+L PLTYLDG PRPDP++DETILA+PRA G +S KER+AGR+PS
Sbjct: 17 RHFSHSAAAVLRPPEPEPLTYLDGFPRPDPKHDETILAVPRADSGKNISAKERRAGRLPS 76
Query: 79 IVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGS-GDLIEKVR 137
IVFEQEDGQHGGNKRLISV+T+QIRKLV HLGRSFF+SRLF LEVRS F S D++E VR
Sbjct: 77 IVFEQEDGQHGGNKRLISVRTDQIRKLVNHLGRSFFLSRLFLLEVRSGFDSENDVVETVR 136
Query: 138 VLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVK 197
VLPR +HL +GTDAPLNVTF+RAP +ALLK+DVPLVFRG+DVSPGL+KG LNTIKRTVK
Sbjct: 137 VLPRAIHLKAGTDAPLNVTFIRAPSDALLKVDVPLVFRGEDVSPGLKKGASLNTIKRTVK 196
Query: 198 FLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRASDQKKS 257
+LCPADI+PPYIDVDLSELDV QK++ GDLKVHPALKLL+ +DE V KI G R S+ +K
Sbjct: 197 YLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQPRDEAVVKIMGQRVSELQKK 256
Query: 258 K 258
K
Sbjct: 257 K 257
>gi|145687759|gb|ABP88855.1| ribosomal protein L25 [Nicotiana benthamiana]
Length = 251
Score = 356 bits (914), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 178/255 (69%), Positives = 207/255 (81%), Gaps = 7/255 (2%)
Query: 5 ITRSTLSKSLN-LQLRCFSQAAAAILPDDPSAPLTYLDGLPRPDPRYDETILAIPRASPG 63
I R L+ SL+ LR FS +AAA++ P P+PDP+YDETI AI RA G
Sbjct: 3 IRRVALTASLHHYHLRFFSNSAAAVVLPYPEP------EFPKPDPKYDETIHAIARAKSG 56
Query: 64 TRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEV 123
++ KERKAGRVPSIVFEQEDGQHGGNKRLISVQ NQIRKLV HLGRS F+SRLFDLEV
Sbjct: 57 KNIAAKERKAGRVPSIVFEQEDGQHGGNKRLISVQANQIRKLVNHLGRSHFLSRLFDLEV 116
Query: 124 RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGL 183
R +F S +++EKVRVLPRKVHL +G+DAPLNVTF+RAP ALLK+DVPL+FRG+DVSPGL
Sbjct: 117 RPDFDSVEVVEKVRVLPRKVHLEAGSDAPLNVTFIRAPSSALLKVDVPLIFRGEDVSPGL 176
Query: 184 RKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPV 243
+KG YLN IKRTVK+LCPAD++PPYIDVDLSELDV QK++ GDLKVHPALKL++ KD PV
Sbjct: 177 KKGSYLNIIKRTVKYLCPADVIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVQPKDHPV 236
Query: 244 CKIAGGRASDQKKSK 258
KI G R SDQKK+K
Sbjct: 237 VKIMGARVSDQKKAK 251
>gi|255537627|ref|XP_002509880.1| 50S ribosomal protein L25, putative [Ricinus communis]
gi|223549779|gb|EEF51267.1| 50S ribosomal protein L25, putative [Ricinus communis]
Length = 252
Score = 355 bits (912), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 176/257 (68%), Positives = 214/257 (83%), Gaps = 5/257 (1%)
Query: 2 LIKITRSTLSKSLNLQLRCFSQAAAAILPDDPSAPLTYLDGLPRPDPRYDETILAIPRAS 61
+ +I R TL+K + LR FSQ+AAA++ ++P PLTYL P+P P ETI AIPRA+
Sbjct: 1 MYRIYRFTLTKPHH-HLRFFSQSAAAVVTEEP--PLTYLKEFPKPGP--AETIEAIPRAT 55
Query: 62 PGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDL 121
G ++VKERKAGRVPSIVFEQE+GQHGGNKRLISVQ NQIR ++ LGRSFF+S+LF+L
Sbjct: 56 SGKSIAVKERKAGRVPSIVFEQENGQHGGNKRLISVQANQIRNMINKLGRSFFLSKLFNL 115
Query: 122 EVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSP 181
EVR EFGS ++IEKVRVLPR VHLH+ +D P+NVTF+RAP +A LK+DVPLV+RG+DVSP
Sbjct: 116 EVRPEFGSDEIIEKVRVLPRLVHLHAISDTPINVTFIRAPSDAWLKVDVPLVYRGEDVSP 175
Query: 182 GLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDE 241
GLRKG YLN IKRTVKFLCPADI+PPYIDVDLSELDV QK++ GDLKVHP+LKL++ +D
Sbjct: 176 GLRKGSYLNIIKRTVKFLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPSLKLIQPEDL 235
Query: 242 PVCKIAGGRASDQKKSK 258
PV KI G R SDQ+K+K
Sbjct: 236 PVVKIMGARVSDQRKAK 252
>gi|356560823|ref|XP_003548686.1| PREDICTED: 50S ribosomal protein L25-like isoform 2 [Glycine max]
Length = 273
Score = 348 bits (894), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 178/257 (69%), Positives = 206/257 (80%), Gaps = 17/257 (6%)
Query: 19 RCFSQAAAAILPDDPSAPLTYLDGLPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPS 78
R FS +AAA+L PLTYLDG PRPDP++DETILA+PRA G +S KER+AGR+PS
Sbjct: 17 RHFSHSAAAVLRPPEPEPLTYLDGFPRPDPKHDETILAVPRADSGKNISAKERRAGRLPS 76
Query: 79 IVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGS-GDLIEKVR 137
IVFEQEDGQHGGNKRLISV+T+QIRKLV HLGRSFF+SRLF LEVRS F S D++E VR
Sbjct: 77 IVFEQEDGQHGGNKRLISVRTDQIRKLVNHLGRSFFLSRLFLLEVRSGFDSENDVVETVR 136
Query: 138 VLPR----------------KVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSP 181
VLPR K+HL +GTDAPLNVTF+RAP +ALLK+DVPLVFRG+DVSP
Sbjct: 137 VLPRAVRSLSLSLSLSLSLIKIHLKAGTDAPLNVTFIRAPSDALLKVDVPLVFRGEDVSP 196
Query: 182 GLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDE 241
GL+KG LNTIKRTVK+LCPADI+PPYIDVDLSELDV QK++ GDLKVHPALKLL+ +DE
Sbjct: 197 GLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQPRDE 256
Query: 242 PVCKIAGGRASDQKKSK 258
V KI G R S+ +K K
Sbjct: 257 AVVKIMGQRVSELQKKK 273
>gi|115462913|ref|NP_001055056.1| Os05g0270000 [Oryza sativa Japonica Group]
gi|55168097|gb|AAV43965.1| unknown protein [Oryza sativa Japonica Group]
gi|113578607|dbj|BAF16970.1| Os05g0270000 [Oryza sativa Japonica Group]
gi|125551610|gb|EAY97319.1| hypothetical protein OsI_19240 [Oryza sativa Indica Group]
gi|215704308|dbj|BAG93148.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 346 bits (887), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 181/265 (68%), Positives = 207/265 (78%), Gaps = 7/265 (2%)
Query: 1 MLIKITRSTLSKSLNLQLRCFSQAAAAIL------PDDPSAPLTYLDGLPRPDPRYDETI 54
M + + R + +L L S AAAA + PD S P YL G PRPD ++DE I
Sbjct: 1 MAMLLRRPLRALTLPLLRPHLSTAAAAEVSPADHHPDLLSPPFGYLPGHPRPDAKHDELI 60
Query: 55 LAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFF 114
LA+PRASPG V+ KERKAGRVP+IVFEQE+GQ GGNKRL+SVQ+ QIRKLV HLGRSFF
Sbjct: 61 LAVPRASPGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVSVQSKQIRKLVDHLGRSFF 120
Query: 115 VSRLFDLEVRSEF-GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
+SRLF L+V SE G G LIE VRVLPRKVHLH+GTD PLNVTF+RAP ALLKIDVPL+
Sbjct: 121 LSRLFRLQVWSEHAGQGVLIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSALLKIDVPLM 180
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
F GDD SPGLRKG Y NTIKRTVK+LCPADIVPPYI+VDLSELDV QK+L DLKVHPAL
Sbjct: 181 FIGDDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPAL 240
Query: 234 KLLRSKDEPVCKIAGGRASDQKKSK 258
KLL+S ++P+C I G RA +QKKSK
Sbjct: 241 KLLQSPEQPICSIIGSRAPEQKKSK 265
>gi|357135392|ref|XP_003569293.1| PREDICTED: 50S ribosomal protein L25-like [Brachypodium distachyon]
Length = 269
Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 171/226 (75%), Positives = 189/226 (83%), Gaps = 1/226 (0%)
Query: 34 SAPLTYLDGLPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR 93
S P YL G PRPDP++DE I A+PRAS G ++ KERKAGRVP+IVFEQE+GQ GGNKR
Sbjct: 40 SPPFEYLPGHPRPDPKHDEVIFAVPRASSGRHLAAKERKAGRVPAIVFEQENGQEGGNKR 99
Query: 94 LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF-GSGDLIEKVRVLPRKVHLHSGTDAP 152
LISV + QIRKLV HLGRSFF+SRLF LEV SE G GDLIE VRVLPRKVHLH+GTD P
Sbjct: 100 LISVPSKQIRKLVDHLGRSFFLSRLFRLEVFSEHAGEGDLIESVRVLPRKVHLHAGTDEP 159
Query: 153 LNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVD 212
LNVTF+RAPP ALLKIDVPL+F G+D SPGLRKG Y NTIKRTVKFLCPADIVPPYI+VD
Sbjct: 160 LNVTFMRAPPSALLKIDVPLMFIGEDASPGLRKGAYFNTIKRTVKFLCPADIVPPYIEVD 219
Query: 213 LSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRASDQKKSK 258
LSELDV QK+L DL VHPALKLL+S D+P+C I G RA DQKK K
Sbjct: 220 LSELDVGQKLLMRDLIVHPALKLLQSPDQPICSIIGSRAPDQKKEK 265
>gi|125526661|gb|EAY74775.1| hypothetical protein OsI_02667 [Oryza sativa Indica Group]
Length = 271
Score = 342 bits (877), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 169/226 (74%), Positives = 191/226 (84%), Gaps = 1/226 (0%)
Query: 34 SAPLTYLDGLPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR 93
S P YL G PRPD ++DE ILA+PRAS G V+ KERKAGRVP+IVFEQE+GQ GGNKR
Sbjct: 46 SPPFDYLPGHPRPDAKHDELILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKR 105
Query: 94 LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF-GSGDLIEKVRVLPRKVHLHSGTDAP 152
L+SVQ+ QIRKLV HLGRSFF+SRLF L+V SE G G+LIE VRVLPRKVHLH+GTD P
Sbjct: 106 LVSVQSKQIRKLVDHLGRSFFLSRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEP 165
Query: 153 LNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVD 212
LNVTF+RAP ALLKIDVPL+F G+D SPGLRKG Y NTIKRTVK+LCPADIVPPYI+VD
Sbjct: 166 LNVTFMRAPSSALLKIDVPLMFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVD 225
Query: 213 LSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRASDQKKSK 258
LSELDV QK+L DLKVHPALKLL+S ++P+C I G RA DQKKSK
Sbjct: 226 LSELDVGQKLLMRDLKVHPALKLLQSPEQPICSIIGSRAPDQKKSK 271
>gi|357508813|ref|XP_003624695.1| 50S ribosomal protein L25 [Medicago truncatula]
gi|87162737|gb|ABD28532.1| Ribosomal protein L25 [Medicago truncatula]
gi|217072210|gb|ACJ84465.1| unknown [Medicago truncatula]
gi|355499710|gb|AES80913.1| 50S ribosomal protein L25 [Medicago truncatula]
Length = 266
Score = 342 bits (877), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 172/253 (67%), Positives = 198/253 (78%), Gaps = 10/253 (3%)
Query: 16 LQLRCFSQAAAAIL----PDDPSAPLTYLDGLPRPDPRYDETILAIPRASPGTRVSVKER 71
L R FS A A++ PD PLTYLDG P+P+P+YDETILAIPR G +S KER
Sbjct: 12 LHRRHFSAIATALIHTPEPDHILQPLTYLDGFPKPNPKYDETILAIPRKDSGKNISAKER 71
Query: 72 KAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG- 130
K GRVPSIVFEQEDG GGNKRLISV+++QIRKLV HLGRSFF+SRLF L+V +F S
Sbjct: 72 KVGRVPSIVFEQEDGHLGGNKRLISVRSDQIRKLVNHLGRSFFLSRLFHLQVLHQFDSDS 131
Query: 131 -----DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK 185
D+IE VRVLPR +HL +GTDAPLNVTF+RAP +A LK+DVP+VFRGDD+SPGL+K
Sbjct: 132 NPNDEDIIENVRVLPRSIHLKAGTDAPLNVTFIRAPSDAWLKVDVPIVFRGDDISPGLKK 191
Query: 186 GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCK 245
G LNTIKRTVK+LCPADI+PPYIDVDLSELDV QK+L GDL VHPALKLL KDE VCK
Sbjct: 192 GASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKVLMGDLNVHPALKLLHPKDEAVCK 251
Query: 246 IAGGRASDQKKSK 258
I G R S+ + K
Sbjct: 252 IMGQRVSETQPKK 264
>gi|224053837|ref|XP_002298004.1| predicted protein [Populus trichocarpa]
gi|222845262|gb|EEE82809.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/231 (72%), Positives = 197/231 (85%), Gaps = 2/231 (0%)
Query: 25 AAAILPDDPSAPLTYLDGLPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQE 84
AAAI+ + PS T LDGLP P P ETI AIPR+ G VS KERKAGRVPSIVFEQE
Sbjct: 1 AAAIIEEPPSIQTTLLDGLPEPGPL--ETIFAIPRSDSGKNVSAKERKAGRVPSIVFEQE 58
Query: 85 DGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVH 144
DGQHGGNKRLISV+ N+IR LV LGR FF+SRLF+L+VR +F S ++IEKVRVLP+ +H
Sbjct: 59 DGQHGGNKRLISVKKNRIRNLVNELGRPFFLSRLFELDVRPQFESDEVIEKVRVLPKAIH 118
Query: 145 LHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADI 204
LH+GTD PLNVTF+RAP ALLK+D+PLVFRG+D+SPGLRKG YLNTIKRTVKF+CPAD+
Sbjct: 119 LHAGTDEPLNVTFIRAPSHALLKVDIPLVFRGEDISPGLRKGAYLNTIKRTVKFVCPADL 178
Query: 205 VPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRASDQK 255
+PP+IDVDLSELDV QK+L GDLKVHPALKL++SK+ PV KI+GGRASD+K
Sbjct: 179 IPPFIDVDLSELDVGQKLLMGDLKVHPALKLVQSKELPVVKISGGRASDKK 229
>gi|115438116|ref|NP_001043461.1| Os01g0593500 [Oryza sativa Japonica Group]
gi|113532992|dbj|BAF05375.1| Os01g0593500 [Oryza sativa Japonica Group]
gi|125571028|gb|EAZ12543.1| hypothetical protein OsJ_02444 [Oryza sativa Japonica Group]
Length = 271
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/226 (74%), Positives = 191/226 (84%), Gaps = 1/226 (0%)
Query: 34 SAPLTYLDGLPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR 93
S P YL G PRPD ++DE ILA+PRAS G V+ KERKAGRVP+IVFEQE+GQ GGNKR
Sbjct: 46 SPPFDYLPGHPRPDAKHDELILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKR 105
Query: 94 LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF-GSGDLIEKVRVLPRKVHLHSGTDAP 152
L+SVQ+ QIRKLV HLGRSFF+SRLF L+V SE G G+LIE VRVLPRKVHLH+GTD P
Sbjct: 106 LVSVQSKQIRKLVDHLGRSFFLSRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEP 165
Query: 153 LNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVD 212
LNVTF+RAP ALLKIDVPL+F G+D SPGLRKG Y NTIKRTVK+LCPADIVPPYI+VD
Sbjct: 166 LNVTFMRAPSSALLKIDVPLMFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVD 225
Query: 213 LSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRASDQKKSK 258
LSELDV QK+L DLKVHPAL+LL+S ++P+C I G RA DQKKSK
Sbjct: 226 LSELDVGQKLLMRDLKVHPALRLLQSPEQPICSIIGSRAPDQKKSK 271
>gi|388494730|gb|AFK35431.1| unknown [Medicago truncatula]
Length = 266
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/253 (67%), Positives = 197/253 (77%), Gaps = 10/253 (3%)
Query: 16 LQLRCFSQAAAAIL----PDDPSAPLTYLDGLPRPDPRYDETILAIPRASPGTRVSVKER 71
L R FS A A++ PD PLTYLDG P+P+P+YDETILAIPR G +S KER
Sbjct: 12 LHRRHFSAIATALIHTPEPDHILQPLTYLDGFPKPNPKYDETILAIPRKDSGKNISAKER 71
Query: 72 KAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG- 130
K GRVPSIVFEQEDG GGNKRLISV+++QIRKLV HLGRSFF+SRLF L+V +F S
Sbjct: 72 KVGRVPSIVFEQEDGHLGGNKRLISVRSDQIRKLVNHLGRSFFLSRLFHLQVLHQFDSDS 131
Query: 131 -----DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK 185
D+IE VRVLPR +HL +GTDAPLNVTF+RAP +A LK+DVP+VFRGDD+SPGL+K
Sbjct: 132 NPNDEDIIENVRVLPRSIHLKAGTDAPLNVTFIRAPSDAWLKVDVPIVFRGDDISPGLKK 191
Query: 186 GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCK 245
G LNTIKRTVK+LCPADI+PPYIDVDLSELDV QK+L GDL VHP LKLL KDE VCK
Sbjct: 192 GASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKVLMGDLNVHPTLKLLHPKDEAVCK 251
Query: 246 IAGGRASDQKKSK 258
I G R S+ + K
Sbjct: 252 IMGQRVSETQPKK 264
>gi|242057875|ref|XP_002458083.1| hypothetical protein SORBIDRAFT_03g026710 [Sorghum bicolor]
gi|241930058|gb|EES03203.1| hypothetical protein SORBIDRAFT_03g026710 [Sorghum bicolor]
Length = 264
Score = 338 bits (868), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 168/229 (73%), Positives = 192/229 (83%), Gaps = 2/229 (0%)
Query: 32 DP-SAPLTYLDGLPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGG 90
DP S P YL G PRPD ++DE ILA+PRAS G V+ KERKAGRVP++VFEQE+GQ GG
Sbjct: 36 DPLSPPYDYLPGHPRPDAKHDEVILAVPRASSGRHVAAKERKAGRVPAVVFEQENGQEGG 95
Query: 91 NKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF-GSGDLIEKVRVLPRKVHLHSGT 149
NKRL+SVQ+ QIRKLV HLGRSFF+SRLF L+V SE G G+LIE VRVLPRKVHLH+GT
Sbjct: 96 NKRLVSVQSKQIRKLVDHLGRSFFLSRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGT 155
Query: 150 DAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYI 209
D PLN+TF+RAP ALLKIDVPL+F G+D SPGLRKG Y NTIKRTVK+LCPADIVPPYI
Sbjct: 156 DEPLNITFMRAPSSALLKIDVPLMFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYI 215
Query: 210 DVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRASDQKKSK 258
+VDLSELDV QK+L DLKVHPALKLL+S D+P+C I G RA +QKK K
Sbjct: 216 EVDLSELDVGQKLLMRDLKVHPALKLLQSPDQPICNIIGSRAPEQKKGK 264
>gi|413950495|gb|AFW83144.1| hypothetical protein ZEAMMB73_241101 [Zea mays]
Length = 305
Score = 333 bits (853), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 167/242 (69%), Positives = 193/242 (79%), Gaps = 7/242 (2%)
Query: 19 RCFSQAA--AAILPDDPSAPLT----YLDGLPRPDPRYDETILAIPRASPGTRVSVKERK 72
R FS A A + PD + PL+ YL G PRPD +++E ILA+PRAS G V+ KERK
Sbjct: 64 RHFSAATVEAFVSPDQATDPLSPPYDYLPGHPRPDAKHNEVILAVPRASSGRHVAAKERK 123
Query: 73 AGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF-GSGD 131
AGRVP+IVFEQE+GQ GGNKRLISV+ NQIRKLV HLGRSFF+SRLF L+V SE G G+
Sbjct: 124 AGRVPAIVFEQENGQEGGNKRLISVRANQIRKLVDHLGRSFFLSRLFSLQVWSEHAGQGE 183
Query: 132 LIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNT 191
LIE VRVLPRKVHLH+GTD PLN+TF+RAP ALLKIDVPL+F G+D SPGLRKG Y NT
Sbjct: 184 LIESVRVLPRKVHLHAGTDEPLNITFMRAPSSALLKIDVPLMFIGEDASPGLRKGAYFNT 243
Query: 192 IKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRA 251
IKRT K+LCPADIVPPYI+VDLSELDV QK+L DLKVHPALKLL S D+P+C G R+
Sbjct: 244 IKRTAKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPALKLLHSPDQPICNFTGSRS 303
Query: 252 SD 253
+
Sbjct: 304 PE 305
>gi|226499442|ref|NP_001141875.1| uncharacterized protein LOC100274018 [Zea mays]
gi|194706262|gb|ACF87215.1| unknown [Zea mays]
Length = 258
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/242 (69%), Positives = 193/242 (79%), Gaps = 7/242 (2%)
Query: 19 RCFSQAA--AAILPDDPSAPLT----YLDGLPRPDPRYDETILAIPRASPGTRVSVKERK 72
R FS A A + PD + PL+ YL G PRPD +++E ILA+PRAS G V+ KERK
Sbjct: 17 RHFSAATVEAFVSPDQATDPLSPPYDYLPGHPRPDAKHNEVILAVPRASSGRHVAAKERK 76
Query: 73 AGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF-GSGD 131
AGRVP+IVFEQE+GQ GGNKRLISV+ NQIRKLV HLGRSFF+SRLF L+V SE G G+
Sbjct: 77 AGRVPAIVFEQENGQEGGNKRLISVRANQIRKLVDHLGRSFFLSRLFSLQVWSEHAGQGE 136
Query: 132 LIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNT 191
LIE VRVLPRKVHLH+GTD PLN+TF+RAP ALLKIDVPL+F G+D SPGLRKG Y NT
Sbjct: 137 LIESVRVLPRKVHLHAGTDEPLNITFMRAPSSALLKIDVPLMFIGEDASPGLRKGAYFNT 196
Query: 192 IKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRA 251
IKRT K+LCPADIVPPYI+VDLSELDV QK+L DLKVHPALKLL S D+P+C G R+
Sbjct: 197 IKRTAKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPALKLLHSPDQPICNFTGSRS 256
Query: 252 SD 253
+
Sbjct: 257 PE 258
>gi|53792263|dbj|BAD52896.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 381
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/181 (75%), Positives = 154/181 (85%), Gaps = 1/181 (0%)
Query: 34 SAPLTYLDGLPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR 93
S P YL G PRPD ++DE ILA+PRAS G V+ KERKAGRVP+IVFEQE+GQ GGNKR
Sbjct: 46 SPPFDYLPGHPRPDAKHDELILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKR 105
Query: 94 LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF-GSGDLIEKVRVLPRKVHLHSGTDAP 152
L+SVQ+ QIRKLV HLGRSFF+SRLF L+V SE G G+LIE VRVLPRKVHLH+GTD P
Sbjct: 106 LVSVQSKQIRKLVDHLGRSFFLSRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEP 165
Query: 153 LNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVD 212
LNVTF+RAP ALLKIDVPL+F G+D SPGLRKG Y NTIKRTVK+LCPADIVPPYI+VD
Sbjct: 166 LNVTFMRAPSSALLKIDVPLMFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVD 225
Query: 213 L 213
L
Sbjct: 226 L 226
>gi|413950494|gb|AFW83143.1| hypothetical protein ZEAMMB73_241101 [Zea mays]
Length = 239
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 139/175 (79%), Gaps = 7/175 (4%)
Query: 19 RCFSQAA--AAILPDDPSAPLT----YLDGLPRPDPRYDETILAIPRASPGTRVSVKERK 72
R FS A A + PD + PL+ YL G PRPD +++E ILA+PRAS G V+ KERK
Sbjct: 64 RHFSAATVEAFVSPDQATDPLSPPYDYLPGHPRPDAKHNEVILAVPRASSGRHVAAKERK 123
Query: 73 AGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF-GSGD 131
AGRVP+IVFEQE+GQ GGNKRLISV+ NQIRKLV HLGRSFF+SRLF L+V SE G G+
Sbjct: 124 AGRVPAIVFEQENGQEGGNKRLISVRANQIRKLVDHLGRSFFLSRLFSLQVWSEHAGQGE 183
Query: 132 LIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKG 186
LIE VRVLPRKVHLH+GTD PLN+TF+RAP ALLKIDVPL+F G+D SPGLRKG
Sbjct: 184 LIESVRVLPRKVHLHAGTDEPLNITFMRAPSSALLKIDVPLMFIGEDASPGLRKG 238
>gi|223944153|gb|ACN26160.1| unknown [Zea mays]
Length = 192
Score = 232 bits (592), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 139/175 (79%), Gaps = 7/175 (4%)
Query: 19 RCFSQAA--AAILPDDPSAPLT----YLDGLPRPDPRYDETILAIPRASPGTRVSVKERK 72
R FS A A + PD + PL+ YL G PRPD +++E ILA+PRAS G V+ KERK
Sbjct: 17 RHFSAATVEAFVSPDQATDPLSPPYDYLPGHPRPDAKHNEVILAVPRASSGRHVAAKERK 76
Query: 73 AGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF-GSGD 131
AGRVP+IVFEQE+GQ GGNKRLISV+ NQIRKLV HLGRSFF+SRLF L+V SE G G+
Sbjct: 77 AGRVPAIVFEQENGQEGGNKRLISVRANQIRKLVDHLGRSFFLSRLFSLQVWSEHAGQGE 136
Query: 132 LIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKG 186
LIE VRVLPRKVHLH+GTD PLN+TF+RAP ALLKIDVPL+F G+D SPGLRKG
Sbjct: 137 LIESVRVLPRKVHLHAGTDEPLNITFMRAPSSALLKIDVPLMFIGEDASPGLRKG 191
>gi|116792350|gb|ABK26327.1| unknown [Picea sitchensis]
Length = 249
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/202 (56%), Positives = 147/202 (72%), Gaps = 3/202 (1%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGG--NKRLISVQTNQIRKLVGHL 109
E I AIPR G + KERK+G VPS+VFEQE+ KRL+SV+++QIR LV +
Sbjct: 39 EVIQAIPRERTGRFFASKERKSGLVPSVVFEQEENGLAAVRRKRLLSVESDQIRGLVNKV 98
Query: 110 GRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
G FF+SR F+LEV + S ++EK RV+PRKVHL GT+ LNV F+ AP A LK+D
Sbjct: 99 GHQFFLSRTFELEVVAGPRSSHILEKGRVVPRKVHLRPGTEEILNVVFVWAPKCAKLKVD 158
Query: 170 VPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
VPLVF+G+DV PGLRKGGYLNTIK+T+ +LCPAD++PPYID+DLS LD+ +K+ D+ V
Sbjct: 159 VPLVFKGEDVCPGLRKGGYLNTIKKTIGYLCPADLIPPYIDIDLSNLDIGEKLHVRDINV 218
Query: 230 HPALKLLRSKDE-PVCKIAGGR 250
HP+LKLL D P+CK+ G R
Sbjct: 219 HPSLKLLSGDDSLPICKMMGTR 240
>gi|168044236|ref|XP_001774588.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674143|gb|EDQ60656.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 206
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 147/208 (70%), Gaps = 3/208 (1%)
Query: 44 PRPDPRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIR 103
P+ + + +E IL PR G VS KER+ GRVPSIVF QE+G GGNK+LISV+T QI
Sbjct: 1 PKEEEKAEEVILGFPRHGSGKIVSKKERRVGRVPSIVFSQENGHIGGNKQLISVETKQIE 60
Query: 104 KLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPE 163
+L+ LG+S F+S FDLEV + G++ K RVLPR +HLH+GTD +NVTF+RAPP
Sbjct: 61 RLIKRLGKSSFLSSTFDLEVYDD--QGNVQAKERVLPRSIHLHAGTDKVMNVTFIRAPPT 118
Query: 164 ALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKIL 223
A LK+DVPL+F G+D PG+RKGGY+ T+ RTVK+ CP + +P I+VDLS LD+ +KIL
Sbjct: 119 ASLKVDVPLIFIGEDACPGIRKGGYIYTMMRTVKYRCPGNSIPSGIEVDLSTLDMGEKIL 178
Query: 224 AGDLKVHPALKLLRSKDE-PVCKIAGGR 250
DL V L+L++ PVCK+ G R
Sbjct: 179 LRDLNVPSELRLVKKDSSLPVCKVMGSR 206
>gi|302770773|ref|XP_002968805.1| hypothetical protein SELMODRAFT_409933 [Selaginella moellendorffii]
gi|300163310|gb|EFJ29921.1| hypothetical protein SELMODRAFT_409933 [Selaginella moellendorffii]
Length = 264
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 144/217 (66%), Gaps = 5/217 (2%)
Query: 40 LDGLPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQT 99
L +P P + + A PR GTR +K R G +P IV QEDG GG+K+L+ + +
Sbjct: 43 LAKVPVPQEAVLDVLYAAPRVESGTRACMKMRNKGIIPGIVCSQEDGHQGGHKQLLVLNS 102
Query: 100 NQIRKLVGHLGRSFFVSRLFDLEVRSEF--GSGDLIEKVRVLPRKVHLHSGTDAPLNVTF 157
N++ L+ G+SFF+SRL+ LE+R+E G+LI + RVLPR +H+H+ +D LN TF
Sbjct: 103 NKLNLLLKKFGQSFFMSRLYTLELRTEPDPKEGELISRERVLPRLIHVHAVSDKVLNATF 162
Query: 158 LRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELD 217
+RAPP A L++D+PLVF G DV PG+RKGGYLNTI+RTV++ D++P YI+VDLS L+
Sbjct: 163 IRAPPHARLRVDIPLVFIGADVCPGIRKGGYLNTIRRTVQYYGAPDLIPKYIEVDLSNLE 222
Query: 218 VEQKILAGDLKVHPALKLLRSKD--EPVCKIAGGRAS 252
Q + DL V P L ++ + D PVCKI G RA+
Sbjct: 223 AGQSVRIKDLNVTPGL-VVYAMDPRWPVCKIVGTRAT 258
>gi|302784798|ref|XP_002974171.1| hypothetical protein SELMODRAFT_149576 [Selaginella moellendorffii]
gi|300158503|gb|EFJ25126.1| hypothetical protein SELMODRAFT_149576 [Selaginella moellendorffii]
Length = 264
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 144/217 (66%), Gaps = 5/217 (2%)
Query: 40 LDGLPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQT 99
L +P P + + A PR GTR +K R G +P IV QEDG GG+K+L+ + +
Sbjct: 43 LAKVPVPQEAVLDVLYAAPRVESGTRACMKMRNKGIIPGIVCSQEDGHQGGHKQLLVLNS 102
Query: 100 NQIRKLVGHLGRSFFVSRLFDLEVRSEF--GSGDLIEKVRVLPRKVHLHSGTDAPLNVTF 157
N++ L+ G+SFF+SRL+ LE+R+E G+LI + RVLPR +H+H+ +D LN TF
Sbjct: 103 NKLNLLLKKFGQSFFMSRLYTLELRTEPDPKEGELISRERVLPRLIHVHAVSDKVLNATF 162
Query: 158 LRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELD 217
+RAPP A L++D+PLVF G DV PG+RKGGYLNTI+RTV++ D++P YI+VDLS L+
Sbjct: 163 IRAPPHARLRVDIPLVFIGADVCPGIRKGGYLNTIRRTVQYYGAPDLIPKYIEVDLSNLE 222
Query: 218 VEQKILAGDLKVHPALKLLRSKD--EPVCKIAGGRAS 252
Q + DL V P L ++ + D PVCKI G RA+
Sbjct: 223 AGQSVRIKDLNVTPGL-VVYAMDPRWPVCKIVGTRAT 258
>gi|359497479|ref|XP_003635532.1| PREDICTED: 50S ribosomal protein L25-like [Vitis vinifera]
Length = 251
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 140/221 (63%), Gaps = 12/221 (5%)
Query: 39 YLDGLPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQE-------DGQHGGN 91
YL LP P Y TI AI R G++VS ++R GR+P++VF Q+ +G+
Sbjct: 23 YLSSLP-PAAAY-HTIQAISREFTGSKVSARDRAQGRIPAVVFAQQLLTGGNMNGRSVSR 80
Query: 92 KRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDA 151
KRL++ + QI+ ++ + F S F L++R+ GS L+E VLP K+H T
Sbjct: 81 KRLLTTERKQIQAILKSVEPEFICSTTFPLQIRAGSGSSVLLESGTVLPLKIHRDEATGK 140
Query: 152 PLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDV 211
LN+ F A + LK+DVPLVF+G+DV PGL+KGGYLN I+ ++KFLCPA+ +P I+V
Sbjct: 141 VLNLVFAWADEGSELKVDVPLVFKGEDVCPGLKKGGYLNRIRPSLKFLCPAEHIPSKIEV 200
Query: 212 DLSELDVEQKILAGDLKVHPALKLLRSKDE--PVCKIAGGR 250
D+S LD+ +IL D++VHP+LKLL SK+E PVCKI +
Sbjct: 201 DVSNLDIGDRILMHDVEVHPSLKLL-SKNETMPVCKIVAAK 240
>gi|359480435|ref|XP_002263685.2| PREDICTED: 50S ribosomal protein L25 [Vitis vinifera]
gi|302144151|emb|CBI23278.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/240 (42%), Positives = 147/240 (61%), Gaps = 13/240 (5%)
Query: 21 FSQAAAAILPDDPSAPLT-YLDGLPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPSI 79
+ AAA L S P + YL P P Y TI AI R G++VS ++R GR+P++
Sbjct: 4 WWGAAAGRLRTAVSNPRSLYLSSSP-PAAAY-HTIQAISREFTGSKVSARDRAQGRIPAV 61
Query: 80 VFEQE-------DGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDL 132
VF Q+ +G+ KRL++ + QI+ ++ + F S F L++R+ GS L
Sbjct: 62 VFAQQLLTGGNINGRSVSRKRLLTTERKQIQAILKSVEPEFICSTTFPLQIRAGSGSSVL 121
Query: 133 IEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTI 192
+E VLP K+H T LN+ F A + LK+DVPLVF+G+DV PGL+KGGYLN I
Sbjct: 122 LESGTVLPLKIHRDEATGKVLNLVFAWADEGSELKVDVPLVFKGEDVCPGLKKGGYLNRI 181
Query: 193 KRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDE--PVCKIAGGR 250
+ ++KFLCPA+ +P I+VD+S LD+ +IL D++VHP+LKLL SK+E PVCKI +
Sbjct: 182 RPSLKFLCPAEHIPSKIEVDVSNLDIGDRILMHDVEVHPSLKLL-SKNETMPVCKIVAAK 240
>gi|255562637|ref|XP_002522324.1| 50S ribosomal protein L25, putative [Ricinus communis]
gi|223538402|gb|EEF40008.1| 50S ribosomal protein L25, putative [Ricinus communis]
Length = 253
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 134/205 (65%), Gaps = 9/205 (4%)
Query: 50 YDETILAIPRASPGTRVSVKERKAGRVPSIVFEQE------DGQHGGNKRLISVQTNQIR 103
+ TI AIPR G+RV+ ++R GR+P++VF Q + + K+L++ + QI+
Sbjct: 25 FYHTIQAIPRECTGSRVAARDRAQGRIPAVVFSQSLLDKNPNSRSISRKQLLTTERKQIQ 84
Query: 104 KLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPE 163
++ + FF S F+L++R+ GS LIE +LP KVH T LN+ F+ A
Sbjct: 85 SILTSVELPFFCSTTFNLQIRAGSGSSVLIESGTILPIKVHRDEETGKILNLVFVWADDG 144
Query: 164 ALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKIL 223
LK+DVPL+F+G++ PGL+KGG LN I++++K LCPA+ +PP ++VD+S LD+ K+
Sbjct: 145 TELKVDVPLIFKGEEDCPGLKKGGKLNRIRKSLKVLCPAEHIPPKLEVDVSSLDIGDKVS 204
Query: 224 AGDLKVHPALKLLRSKDE--PVCKI 246
GD++VHP+LKLL SK+E P+CKI
Sbjct: 205 MGDVEVHPSLKLL-SKNENIPICKI 228
>gi|357518581|ref|XP_003629579.1| 50S ribosomal protein L25 [Medicago truncatula]
gi|355523601|gb|AET04055.1| 50S ribosomal protein L25 [Medicago truncatula]
Length = 255
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 135/204 (66%), Gaps = 7/204 (3%)
Query: 50 YDETILAIPRASPGTRVSVKERKAGRVPSIVFEQE------DGQHGGNKRLISVQTNQIR 103
+ TI AIPR G+RV+ ++RK GR+P++VF Q+ + + K+L++V+ QI+
Sbjct: 29 HYHTIQAIPREITGSRVAARDRKQGRIPAVVFFQDLLEKSPEARSTSRKQLLTVEKRQIK 88
Query: 104 KLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPE 163
++ + FF S F L++R+ GS L+E VLP K+H + LN+ F+ A
Sbjct: 89 AVLNSIEAPFFCSTRFPLQIRAGSGSTHLLESGTVLPIKIHRDEESGNILNLVFVWAEDG 148
Query: 164 ALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKIL 223
LK+DVP+V +G+DV PGL+KGG+LN I+ ++++L P++ +P I+VD+S LD+E +I
Sbjct: 149 MNLKVDVPVVIKGEDVCPGLKKGGFLNKIRTSLRYLGPSEHIPSKIEVDISNLDIEDRIF 208
Query: 224 AGDLKVHPALKLL-RSKDEPVCKI 246
D++VHP+LKLL ++++ P+CKI
Sbjct: 209 MRDIEVHPSLKLLNKNENMPICKI 232
>gi|413950493|gb|AFW83142.1| hypothetical protein ZEAMMB73_241101 [Zea mays]
Length = 223
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 101/132 (76%), Gaps = 7/132 (5%)
Query: 19 RCFSQAA--AAILPDDPSAPLT----YLDGLPRPDPRYDETILAIPRASPGTRVSVKERK 72
R FS A A + PD + PL+ YL G PRPD +++E ILA+PRAS G V+ KERK
Sbjct: 64 RHFSAATVEAFVSPDQATDPLSPPYDYLPGHPRPDAKHNEVILAVPRASSGRHVAAKERK 123
Query: 73 AGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF-GSGD 131
AGRVP+IVFEQE+GQ GGNKRLISV+ NQIRKLV HLGRSFF+SRLF L+V SE G G+
Sbjct: 124 AGRVPAIVFEQENGQEGGNKRLISVRANQIRKLVDHLGRSFFLSRLFSLQVWSEHAGQGE 183
Query: 132 LIEKVRVLPRKV 143
LIE VRVLPRKV
Sbjct: 184 LIESVRVLPRKV 195
>gi|224096802|ref|XP_002310742.1| predicted protein [Populus trichocarpa]
gi|222853645|gb|EEE91192.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 130/207 (62%), Gaps = 8/207 (3%)
Query: 49 RYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQE------DGQHGGNKRLISVQTNQI 102
RY TI AIPR G+RVS +ER+ GR+P++VF Q ++ KRL++ + QI
Sbjct: 29 RY-HTIQAIPREVVGSRVSAREREQGRIPAVVFSQSLLDINPSNRYTSRKRLLTTEKKQI 87
Query: 103 RKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPP 162
++ + FF S F L++R+ GS L+E VLP K+H T LN+ F A
Sbjct: 88 LAILKSVEIPFFCSTTFPLQIRAGTGSSVLLESGTVLPIKIHRDEKTGKILNLVFAWADE 147
Query: 163 EALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
+K+DVP+VF+G++ PGL+KGG+L ++ T+K+LCPA+ +P I+VD+S LD+E +
Sbjct: 148 GTEMKVDVPVVFKGEENCPGLKKGGHLKMMRSTLKYLCPAEHIPQKIEVDISNLDIEDGL 207
Query: 223 LAGDLKVHPALKLL-RSKDEPVCKIAG 248
D++VH +LKLL ++++ PVCKI
Sbjct: 208 FMRDIEVHSSLKLLSKNENMPVCKIVA 234
>gi|356511738|ref|XP_003524580.1| PREDICTED: 50S ribosomal protein L25-like [Glycine max]
Length = 246
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 127/203 (62%), Gaps = 9/203 (4%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQE------DGQHGGNKRLISVQTNQIRKL 105
TI AIPR G++VS ++R GR+P +VF Q D + K L++V+ QI+ +
Sbjct: 32 HTIQAIPRECSGSKVSARDRTQGRIPCVVFLQNLLEKNPDARSESKKHLLTVEKKQIKAI 91
Query: 106 VGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEAL 165
+ FF S F L++R+ GS L+E VLP K+H + LN+ F+ A
Sbjct: 92 LDSADAPFFCSTRFPLQIRAGSGSSHLLESGTVLPIKIHRDEESGKILNLVFVWAEDGMK 151
Query: 166 LKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAG 225
LK+DVP+VF G+D PG++KGG LN I+ ++KFLCP++ +P I VD+S LD+E +I
Sbjct: 152 LKVDVPVVFEGEDACPGVQKGGILNKIRPSLKFLCPSEHIPSKIVVDVSNLDIEDRIFMR 211
Query: 226 DLKVHPALKLLRSKDE--PVCKI 246
D++VHP+LKLL SK+E P+CKI
Sbjct: 212 DIEVHPSLKLL-SKNESMPICKI 233
>gi|15240108|ref|NP_201487.1| Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding
domain protein [Arabidopsis thaliana]
gi|9758136|dbj|BAB08628.1| unnamed protein product [Arabidopsis thaliana]
gi|15450930|gb|AAK96736.1| Unknown protein [Arabidopsis thaliana]
gi|17978763|gb|AAL47375.1| unknown protein [Arabidopsis thaliana]
gi|332010889|gb|AED98272.1| Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding
domain protein [Arabidopsis thaliana]
Length = 249
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 128/205 (62%), Gaps = 9/205 (4%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQE----DGQHGG--NKRLISVQTNQIRKL 105
+TI AIPR + G VS ++R GR+P++VF Q D G K+L++ QI+ +
Sbjct: 34 QTIQAIPREATGRGVSARDRTIGRIPAVVFPQSLLDTDASKRGVSRKQLLTADKKQIKSI 93
Query: 106 VGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEAL 165
+ +G FF S F L++R+ GS L+E RVLP KVH T LN+ F+ A
Sbjct: 94 IDSVGLPFFCSTTFQLQIRAGQGSSTLVESGRVLPLKVHRDEETGKILNLVFVWADDGEK 153
Query: 166 LKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAG 225
LK+DVP+VF+G D PGL+KGG L TI+ T+K L PA+ +P I+VD+S LD+E K+L
Sbjct: 154 LKVDVPVVFKGLDHCPGLQKGGNLRTIRSTLKLLGPAEHIPSKIEVDVSNLDIEDKVLLQ 213
Query: 226 DLKVHPALKLLRSKDE--PVCKIAG 248
D+ HP+LKLL SK+E PVCKI
Sbjct: 214 DVVFHPSLKLL-SKNETMPVCKIVA 237
>gi|297794323|ref|XP_002865046.1| hypothetical protein ARALYDRAFT_920032 [Arabidopsis lyrata subsp.
lyrata]
gi|297310881|gb|EFH41305.1| hypothetical protein ARALYDRAFT_920032 [Arabidopsis lyrata subsp.
lyrata]
Length = 245
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 133/221 (60%), Gaps = 10/221 (4%)
Query: 36 PLTYLDGLPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQE----DGQHGG- 90
P + G R +Y +TI AIPR + G VS ++R GR+P++VF Q D G
Sbjct: 15 PASSFGGSIRRIHQY-QTIQAIPREATGRGVSARDRTIGRIPAVVFPQSLLETDASKRGV 73
Query: 91 -NKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGT 149
K+L++ QI+ ++ +G FF S F L++R+ GS L+E RVLP K+H
Sbjct: 74 SRKQLLTADNKQIKSIIDSVGLPFFCSTTFQLQIRAGQGSSTLVESGRVLPLKIHRDEEN 133
Query: 150 DAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYI 209
LN+ F+ A LK+DVP+VF G D PGL+KGG L +I+ T+K L PA+ +P I
Sbjct: 134 GKILNLVFVWADDGEKLKVDVPVVFNGLDNCPGLKKGGNLRSIRSTLKLLGPAEHIPSKI 193
Query: 210 DVDLSELDVEQKILAGDLKVHPALKLLRSKDE--PVCKIAG 248
+VD+SELD+E K+L D+ HP+LKLL SK+E PVCKI
Sbjct: 194 EVDVSELDIEDKVLLQDVVFHPSLKLL-SKNETMPVCKIVA 233
>gi|449461415|ref|XP_004148437.1| PREDICTED: 50S ribosomal protein L25-like [Cucumis sativus]
gi|449515688|ref|XP_004164880.1| PREDICTED: 50S ribosomal protein L25-like [Cucumis sativus]
Length = 258
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 128/202 (63%), Gaps = 9/202 (4%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQE----DGQHGG--NKRLISVQTNQIRKLV 106
TI AIPR G ++S K+R GR+P++VF Q+ + HG K L++ + QI ++
Sbjct: 36 TIQAIPRECSGRKISSKDRAQGRIPAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSIL 95
Query: 107 GHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALL 166
+ FF S F L++R+ GS L+E +LP K+H + T N+ F+ A + L
Sbjct: 96 KSVELPFFCSTRFKLQIRAGSGSSVLLESGSILPIKIHRNEETGKIFNIVFVWADEGSEL 155
Query: 167 KIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGD 226
K+DVP+VF+G++ PGL+KGG LN I+ ++K+LCPA+ +P I+VD+S LD+ +I D
Sbjct: 156 KVDVPIVFKGEEACPGLQKGGQLNKIRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRD 215
Query: 227 LKVHPALKLLRSKDE--PVCKI 246
+ VH ++KLL SK+E P+CKI
Sbjct: 216 VDVHSSMKLL-SKNEVMPICKI 236
>gi|388505558|gb|AFK40845.1| unknown [Lotus japonicus]
Length = 195
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 122/188 (64%), Gaps = 7/188 (3%)
Query: 74 GRVPSIVFEQE------DGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
GR+P+ VF Q+ + K L++V+ QI+ ++ + SFF S F L++R+
Sbjct: 3 GRIPAAVFLQDLLSKDAGNRSAAKKHLLTVEKKQIKAILNSVQTSFFCSTRFPLQIRAGS 62
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
GS L+E VLP K+H+ + LN+ F+ A LK+DVP+VF+G+DV PGL+KGG
Sbjct: 63 GSSHLVESGTVLPVKIHMDQESGQILNLVFVWAEGGMNLKVDVPVVFKGEDVCPGLQKGG 122
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL-RSKDEPVCKI 246
+LN I+ ++KFLCP++ +P I+VD+S LD+E +I D++VHP+LKLL ++++ P+CK+
Sbjct: 123 FLNKIRTSLKFLCPSEHIPSKIEVDVSNLDIEDRIFMRDIEVHPSLKLLSKNENMPICKV 182
Query: 247 AGGRASDQ 254
+Q
Sbjct: 183 VPTSLGNQ 190
>gi|413950492|gb|AFW83141.1| hypothetical protein ZEAMMB73_241101 [Zea mays]
Length = 96
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 79/96 (82%)
Query: 158 LRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELD 217
+RAP ALLKIDVPL+F G+D SPGLRKG Y NTIKRT K+LCPADIVPPYI+VDLSELD
Sbjct: 1 MRAPSSALLKIDVPLMFIGEDASPGLRKGAYFNTIKRTAKYLCPADIVPPYIEVDLSELD 60
Query: 218 VEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRASD 253
V QK+L DLKVHPALKLL S D+P+C G R+ +
Sbjct: 61 VGQKLLMRDLKVHPALKLLHSPDQPICNFTGSRSPE 96
>gi|296085755|emb|CBI29566.3| unnamed protein product [Vitis vinifera]
Length = 179
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 111/168 (66%), Gaps = 3/168 (1%)
Query: 85 DGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVH 144
+G+ KRL++ + QI+ ++ + F S F L++R+ GS L+E VLP K+H
Sbjct: 2 NGRSVSRKRLLTTERKQIQAILKSVEPEFICSTTFPLQIRAGSGSSVLLESGTVLPLKIH 61
Query: 145 LHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADI 204
T LN+ F A + LK+DVPLVF+G+DV PGL+KGGYLN I+ ++KFLCPA+
Sbjct: 62 RDEATGKVLNLVFAWADEGSELKVDVPLVFKGEDVCPGLKKGGYLNRIRPSLKFLCPAEH 121
Query: 205 VPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDE--PVCKIAGGR 250
+P I+VD+S LD+ +IL D++VHP+LKLL SK+E PVCKI +
Sbjct: 122 IPSKIEVDVSNLDIGDRILMHDVEVHPSLKLL-SKNETMPVCKIVAAK 168
>gi|357121142|ref|XP_003562280.1| PREDICTED: 50S ribosomal protein L25-like [Brachypodium distachyon]
Length = 237
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 126/201 (62%), Gaps = 6/201 (2%)
Query: 50 YDETILAIPRASPGTRVSVKERKAGRVPSIVFEQED---GQHGGNKRLISVQTNQIRKLV 106
Y TI A+PR + G R + +ER+ G VP+++ G+ +++L++ Q+ +++
Sbjct: 32 YHHTIQAVPRETTGPRAAARERRNGHVPAVLLTLAGAGPGEGVAHRKLLTTDRKQLSEML 91
Query: 107 GHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALL 166
+F+S L+VR+ S ++ VLP KVH T LN+ ++A ++
Sbjct: 92 KQ--SPYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHTDESTGNILNLVMVQADEGTMI 149
Query: 167 KIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGD 226
K+++P+VF+G+DV PGL+KGG+L I+ ++ +LCPA+ +PP I+VDL+ LD+ ++L D
Sbjct: 150 KVNLPVVFKGEDVCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLTNLDIGDRVLMND 209
Query: 227 LKVHPALKLL-RSKDEPVCKI 246
+ VHP+LKLL R++ PVCK+
Sbjct: 210 IPVHPSLKLLSRNETMPVCKL 230
>gi|226528050|ref|NP_001150286.1| LOC100283916 [Zea mays]
gi|195638102|gb|ACG38519.1| 5S rRNA binding protein [Zea mays]
Length = 240
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 122/200 (61%), Gaps = 4/200 (2%)
Query: 50 YDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHL 109
Y TI A+PR + G R + +ER+ GRVP+++ G + T R+L L
Sbjct: 35 YHHTIQAVPRETAGPRAAARERRHGRVPAVLLTLAGAAPGNGIAHRHLLTADRRQLAEML 94
Query: 110 GRS-FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
+S +F+S L+VR+ S ++ VLP KVH + LN+ ++A +LK+
Sbjct: 95 KQSPYFLSTPVRLQVRAGERSNAILHAGTVLPIKVHRDENSGNILNLVMVKADEGTMLKV 154
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
D+P+ F+G+D PGL+KGG+L I+ ++ +LCPA+ +PP I+VDL+ LDV ++L D+
Sbjct: 155 DLPVEFKGEDACPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLTNLDVGDRVLMHDIP 214
Query: 229 VHPALKLLRSKDE--PVCKI 246
VHP+LKLL SK+E PVCKI
Sbjct: 215 VHPSLKLL-SKNETMPVCKI 233
>gi|242033675|ref|XP_002464232.1| hypothetical protein SORBIDRAFT_01g014640 [Sorghum bicolor]
gi|241918086|gb|EER91230.1| hypothetical protein SORBIDRAFT_01g014640 [Sorghum bicolor]
Length = 240
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 123/204 (60%), Gaps = 4/204 (1%)
Query: 50 YDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHL 109
Y TI A+PR + G R + +ER+ GRVP+++ G + T R+L L
Sbjct: 32 YHHTIQAVPRETAGPRAAARERRHGRVPAVLLTLAGAAPGNGIAHRQLLTADRRQLAEML 91
Query: 110 GRS-FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
+S +F+S L+VR+ S ++ VLP KVH + LN+ ++A +LK+
Sbjct: 92 KQSPYFLSTPVRLQVRAGERSNAIVHAGTVLPIKVHRDETSGNILNLVMVKADEGTMLKV 151
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
D+P+ F+G+D PGL+KGG+L I+ ++ +LCPA+ +PP I+VDL+ LDV ++L D+
Sbjct: 152 DLPVEFKGEDTCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLTNLDVGDRVLMHDIP 211
Query: 229 VHPALKLLRSKDE--PVCKIAGGR 250
VHP+LKLL SK+E P+CKI +
Sbjct: 212 VHPSLKLL-SKNETMPICKILASK 234
>gi|413933669|gb|AFW68220.1| 5S rRNA binding protein [Zea mays]
Length = 239
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 121/200 (60%), Gaps = 4/200 (2%)
Query: 50 YDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHL 109
Y TI A+PR + G R + +ER+ GRVP+++ G + T R+L L
Sbjct: 34 YHHTIQAVPRETAGPRAAARERRHGRVPAVLLTLAGAAPGNGIAHRHLLTADRRQLAEML 93
Query: 110 GRS-FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
+S +F+S L+VR+ S ++ VLP KVH + LN+ ++A +LK+
Sbjct: 94 KQSPYFLSTPVRLQVRAGERSNAILHAGTVLPIKVHRDENSGNILNLVMVKADEGTMLKV 153
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
D+P+ F+G D PGL+KGG+L I+ ++ +LCPA+ +PP I+VDL+ LDV ++L D+
Sbjct: 154 DLPVEFKGKDACPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLTNLDVGDRVLMHDIP 213
Query: 229 VHPALKLLRSKDE--PVCKI 246
VHP+LKLL SK+E PVCKI
Sbjct: 214 VHPSLKLL-SKNETMPVCKI 232
>gi|218193303|gb|EEC75730.1| hypothetical protein OsI_12602 [Oryza sativa Indica Group]
Length = 239
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 126/202 (62%), Gaps = 8/202 (3%)
Query: 50 YDETILAIPRASPGTRVSVKERKAGRVPSIVFEQED---GQHGGNKRLISVQTNQIRKLV 106
Y TI A+PR + G R + +ER++GRVP+++ G+ +++L++ Q+ +++
Sbjct: 34 YHHTIQALPRETAGPRAAARERRSGRVPAVLLALAGAGPGEGVAHRKLLTADRKQLGEIL 93
Query: 107 GHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALL 166
+F+S L+VR+ S ++ VLP KVH T LN+ + A +L
Sbjct: 94 KQ--SPYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDETTGNILNLVLVEADEGTML 151
Query: 167 KIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGD 226
K+++P+ F+G+DV PGL+KGG+L I+ ++ +LCPA+ +PP I+VDL+ LD+ ++ D
Sbjct: 152 KVNLPVEFKGEDVCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLANLDIGDRVSMND 211
Query: 227 LKVHPALKLLRSKDE--PVCKI 246
+ VHP+LKLL SK+E PVCKI
Sbjct: 212 IPVHPSLKLL-SKNETMPVCKI 232
>gi|108709804|gb|ABF97599.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 containing
protein, expressed [Oryza sativa Japonica Group]
Length = 239
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 126/202 (62%), Gaps = 8/202 (3%)
Query: 50 YDETILAIPRASPGTRVSVKERKAGRVPSIVFEQED---GQHGGNKRLISVQTNQIRKLV 106
Y TI A+PR + G R + +ER++GRVP+++ G+ +++L++ Q+ +++
Sbjct: 34 YHHTIQALPRETAGPRAAARERRSGRVPAVLLALAGAGPGEGVAHRKLLTADRKQLGEIL 93
Query: 107 GHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALL 166
+F+S L+VR+ S ++ VLP KVH T LN+ + A +L
Sbjct: 94 KQ--SPYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDETTGNILNLVLVEADEGTML 151
Query: 167 KIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGD 226
K+++P+ F+G+DV PGL+KGG+L I+ ++ +LCPA+ +PP I+VDL+ LD+ ++ D
Sbjct: 152 KVNLPVEFKGEDVCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLANLDIGDRVSMND 211
Query: 227 LKVHPALKLLRSKDE--PVCKI 246
+ VHP+L+LL SK+E PVCKI
Sbjct: 212 IPVHPSLRLL-SKNETMPVCKI 232
>gi|384245941|gb|EIE19433.1| ribosomal protein L25-like protein [Coccomyxa subellipsoidea C-169]
Length = 237
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 118/203 (58%), Gaps = 8/203 (3%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGR 111
+ + AI R G+RV+ + RK GR P+I+F + RLISV + + LV GR
Sbjct: 42 QRLTAIEREGGGSRVAARLRKTGRTPAILFSLPQNE----SRLISVDSKEATSLVRIHGR 97
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
+SR+F L++ ++ VLPR VH++S TD N+T + PP+ ++ I VP
Sbjct: 98 KGLLSRIFQLDLAV---PDKPVQSYPVLPRLVHINSVTDEVENITLMHCPPDRMVTIAVP 154
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
+ G+++SPG++KGG+LN ++RTVK + PA +P I++D+S LD Q+I + + P
Sbjct: 155 IKIVGEELSPGIKKGGHLNLVQRTVKCMGPASAIPESIEIDISSLDFGQRIYPSGVAIPP 214
Query: 232 ALKLL-RSKDEPVCKIAGGRASD 253
+ + +P+CK+AG A D
Sbjct: 215 GVSTVGLVAGQPLCKLAGRAARD 237
>gi|307103465|gb|EFN51725.1| hypothetical protein CHLNCDRAFT_139900 [Chlorella variabilis]
Length = 239
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 112/196 (57%), Gaps = 8/196 (4%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G+ S K RKAG+ P IVF GG + L++ + + KLV LGR+
Sbjct: 50 TLAAEERGLVGSIASNKLRKAGKTPGIVFSGP----GGEQHLLAFDSKALGKLVTKLGRT 105
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ +FDL+++ E GS VR L R+VH+ S TDA NVTF+ PPE ++++VPL
Sbjct: 106 AWACSVFDLQIQGEDGSS---RTVRALGRQVHMTSTTDAVENVTFVFCPPERQVRVEVPL 162
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
G+DVSPG++ GG +N I+RT+ L D +P VD+S++++ K+ DL V
Sbjct: 163 KVIGEDVSPGIKGGGRVNWIRRTIPCLARGDSIPRDFTVDISKMELNDKLYFTDLAVPQG 222
Query: 233 LKLLRSKDE-PVCKIA 247
L R P+ K+A
Sbjct: 223 AVLHRVNAALPILKVA 238
>gi|356565643|ref|XP_003551048.1| PREDICTED: 50S ribosomal protein L25-like [Glycine max]
Length = 244
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
FF S F L++R+ GS L E VLP K+H + LN+ F+ A LK+DVP+
Sbjct: 97 FFCSTRFPLQIRAGSGSSHLPESGTVLPIKIHRDEESGKILNLVFVWAEDGMKLKVDVPV 156
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
VF+G+D PG++KGG LN I+ +++FLCP++ +P I VD+S LD+E +I D++VHP+
Sbjct: 157 VFKGEDACPGVQKGGILNKIRPSLRFLCPSEHIPSNIAVDVSNLDIEDRIFMRDIEVHPS 216
Query: 233 LKLL-RSKDEPVCKIA 247
LKLL ++++ PVCKI
Sbjct: 217 LKLLSKNENMPVCKIV 232
>gi|222630912|gb|EEE63044.1| hypothetical protein OsJ_17852 [Oryza sativa Japonica Group]
Length = 83
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%), Gaps = 1/78 (1%)
Query: 182 GLRKGG-YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKD 240
G R+GG Y NTIKRTVK+LCPADIVPPYI+VDLSELDV QK+L DLKVHPALKLL+S +
Sbjct: 6 GYREGGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPALKLLQSPE 65
Query: 241 EPVCKIAGGRASDQKKSK 258
+P+C I G RA +QKKSK
Sbjct: 66 QPICSIIGSRAPEQKKSK 83
>gi|224171812|ref|XP_002339565.1| predicted protein [Populus trichocarpa]
gi|222875359|gb|EEF12490.1| predicted protein [Populus trichocarpa]
Length = 92
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/69 (78%), Positives = 64/69 (92%)
Query: 187 GYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
YLNTIKRTVKF+CPAD++PP+IDVDLSELDV QK+L GDLKVHPALKL++SK+ PV KI
Sbjct: 22 AYLNTIKRTVKFVCPADLIPPFIDVDLSELDVGQKLLMGDLKVHPALKLVQSKELPVVKI 81
Query: 247 AGGRASDQK 255
+GGRASD+K
Sbjct: 82 SGGRASDKK 90
>gi|223949451|gb|ACN28809.1| unknown [Zea mays]
Length = 148
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 91/140 (65%), Gaps = 3/140 (2%)
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+F+S L+VR+ S ++ VLP KVH + LN+ ++A +LK+D+P+
Sbjct: 7 YFLSTPVRLQVRAGERSNAILHAGTVLPIKVHRDENSGNILNLVMVKADEGTMLKVDLPV 66
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F+G D PGL+KGG+L I+ ++ +LCPA+ +PP I+VDL+ LDV ++L D+ VHP+
Sbjct: 67 EFKGKDACPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLTNLDVGDRVLMHDIPVHPS 126
Query: 233 LKLLRSKDE--PVCKIAGGR 250
LKLL SK+E PVCKI +
Sbjct: 127 LKLL-SKNETMPVCKILASK 145
>gi|145352002|ref|XP_001420348.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580582|gb|ABO98641.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 239
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 105/194 (54%), Gaps = 8/194 (4%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R GT S + R+ GRVP +VF G G +I+V ++ V + +
Sbjct: 44 RVDGGTASSTRARREGRVPGVVFAP--GSERGT--MITVCEREMNAAVRKHTLAGVACEV 99
Query: 119 FDLEVRSEFGSGDL---IEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
FDLEV++ +G+ +VR L ++V +H+ NV FL PE +K+ VP+ +
Sbjct: 100 FDLEVQTTTATGEESGETRRVRALAKQVQMHAYNQMVDNVCFLEVKPETEVKVRVPVATQ 159
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G+DVSPG+++GG++ +++TV C +D +P +D+S LD + I GD+ V +KL
Sbjct: 160 GEDVSPGVKRGGFVQIMRQTVPVRCRSDSIPKRFLMDVSTLDAGKVIKIGDVTVPEGVKL 219
Query: 236 LRSK-DEPVCKIAG 248
L + + P+ +I G
Sbjct: 220 LDADLNLPLVRIGG 233
>gi|344923270|ref|ZP_08776731.1| 50S ribosomal protein L25 [Candidatus Odyssella thessalonicensis
L13]
Length = 198
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 16/177 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI A PR + GT + R+ G VP +V+ H + IS+ I K L +
Sbjct: 6 TIEAQPREALGTGGARATRRDGLVPGVVY-----GHNKENKFISIDPRSIAK---ELYKP 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F SRLF L V VL + V LH +DAPL++ F+R ++ + +++P+
Sbjct: 58 GFFSRLFALSVNGN--------TEHVLVKDVQLHPVSDAPLHIDFMRVSKDSKIHVNIPV 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
DD +PG++KGG +N + T++ +CPAD +P I VDL+++D Q + D+++
Sbjct: 110 HVINDDKAPGVKKGGMVNIVHHTLEVICPADSIPSEIVVDLAKIDAGQAVHLTDIQL 166
>gi|297717838|gb|ADI50062.1| LSU ribosomal protein L25p [Candidatus Odyssella thessalonicensis
L13]
Length = 197
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 16/177 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI A PR + GT + R+ G VP +V+ H + IS+ I K L +
Sbjct: 6 TIEAQPREALGTGGARATRRDGLVPGVVY-----GHNKENKFISIDPRSIAK---ELYKP 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F SRLF L V VL + V LH +DAPL++ F+R ++ + +++P+
Sbjct: 58 GFFSRLFALSVNGN--------TEHVLVKDVQLHPVSDAPLHIDFMRVSKDSKIHVNIPV 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
DD +PG++KGG +N + T++ +CPAD +P I VDL+++D Q + D+++
Sbjct: 110 HVINDDKAPGVKKGGMVNIVHHTLEVICPADSIPSEIVVDLAKIDAGQAVHLTDIQL 166
>gi|308809493|ref|XP_003082056.1| putative protein (ISS) [Ostreococcus tauri]
gi|116060523|emb|CAL55859.1| putative protein (ISS), partial [Ostreococcus tauri]
Length = 218
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGR 111
E + RA G ++ + R+ GRVP+++F + K L++ ++ V
Sbjct: 22 ERLTCETRAGTGKGIAGRTRREGRVPAVLFRPGSVE----KTLLTASERELNAAVRRHTL 77
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
+ +F+LEV G+ + VR L ++VH+H+ + NV FL PE +++ VP
Sbjct: 78 AGTQCEVFELEVTDGDGTPRI---VRALAKQVHMHAYNKSVENVCFLEVEPETEVRVRVP 134
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
+ G+DVSPG+++GG++ +++TV C +D +P VD+S LD + I D+KV
Sbjct: 135 VETLGEDVSPGVKRGGFVQILRKTVPVKCRSDSIPKKFTVDVSALDAGKIIRIRDVKVAE 194
Query: 232 ALKLLRSK-DEPVCKIAG 248
+KLL + D P+ IAG
Sbjct: 195 GIKLLDANLDLPLIIIAG 212
>gi|334141926|ref|YP_004535133.1| 50S ribosomal protein L25 [Novosphingobium sp. PP1Y]
gi|359401741|ref|ZP_09194707.1| large subunit ribosomal protein L25 [Novosphingobium
pentaromativorans US6-1]
gi|333939957|emb|CCA93315.1| large subunit ribosomal protein L25 [Novosphingobium sp. PP1Y]
gi|357596906|gb|EHJ58658.1| large subunit ribosomal protein L25 [Novosphingobium
pentaromativorans US6-1]
Length = 226
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 94/171 (54%), Gaps = 16/171 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S R+ GRVP++V+ GGN+ +++ + ++LV LG F + +
Sbjct: 29 RERAGKGASRALRRDGRVPAVVY-------GGNEEPLAIHV-EAKELVRQLGTGHFFNSI 80
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
++EV + K+R LP+ V H +D PL+V FLR A + ++VP+ F ++
Sbjct: 81 VEVEVGGK--------KLRTLPKDVAFHPVSDRPLHVDFLRLAKGASVHVNVPVSFVNEE 132
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+PGL++GG LN ++ ++ +C AD +P I +D++ DV + I +K+
Sbjct: 133 KAPGLKRGGVLNVVRHELELVCAADKIPEEIAIDVTGFDVGESIHISHVKL 183
>gi|402825821|ref|ZP_10875074.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. LH128]
gi|402260639|gb|EJU10749.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. LH128]
Length = 202
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 100/191 (52%), Gaps = 17/191 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S R+ GRVP++++ GGN+ +++ Q ++L LG F + +
Sbjct: 12 RDRAGKGASRALRREGRVPAVIY-------GGNEEPLAIHV-QEKELSRQLGTGHFFNSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
++EV + K R P+ V H +D PL+ FLR A + ++VP+VF ++
Sbjct: 64 IEVEVDGK--------KFRTQPKDVAFHPVSDRPLHADFLRLAKGATVHVNVPVVFENEE 115
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK-LLR 237
+SPGL++GG LN ++ ++ +C A+ +P I +D++ DV + I +K+ ++ +
Sbjct: 116 LSPGLKRGGVLNIVRHDLELVCDAEKIPHEITIDVTGFDVGESIHISHVKLPKGVESAIT 175
Query: 238 SKDEPVCKIAG 248
+D + IA
Sbjct: 176 DRDYTIATIAA 186
>gi|334344483|ref|YP_004553035.1| 50S ribosomal protein L25 [Sphingobium chlorophenolicum L-1]
gi|334101105|gb|AEG48529.1| 50S ribosomal protein L25 [Sphingobium chlorophenolicum L-1]
Length = 204
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 91/172 (52%), Gaps = 20/172 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLG 110
T+ A R G S R+ GRVP++++ G N+ + I V+ + KL+G
Sbjct: 6 TLSAEARDRAGKGASRALRREGRVPAVIY-------GNNEEPQSIHVEEKLLNKLLG--T 56
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
FF S +F E G +KVR LP+ V H +D PL+ FLR A + ++V
Sbjct: 57 GHFFNSVVF-----VEVGG----KKVRTLPKDVAFHPVSDRPLHADFLRVSEHATVHVNV 107
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
P+VF+ +D SPGL+KGG LN + V+ + A +P + VDL+ LDV + I
Sbjct: 108 PVVFKNEDASPGLKKGGVLNIVAHEVELIVDAAEIPDDVVVDLTGLDVGETI 159
>gi|163794565|ref|ZP_02188536.1| branched-chain amino acid aminotransferase [alpha proteobacterium
BAL199]
gi|159180289|gb|EDP64812.1| branched-chain amino acid aminotransferase [alpha proteobacterium
BAL199]
Length = 209
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 16/170 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G + R+ G VP++++ G + +S+ +R+L L +
Sbjct: 6 TLGASARDRAGKGSARAARREGLVPAVIY-------GDKQDPVSINLT-LRELEKLLTKP 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F S L D++V K RVLPR + H +D PL+V FLR + L +DVP+
Sbjct: 58 GFFSHLLDIDVAGT--------KHRVLPRDLQQHPVSDKPLHVDFLRVSASSELTVDVPV 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
F D+ SPGLR+GG LN ++ +V+ C AD +P I +DL+ L + +
Sbjct: 110 EFENDEASPGLRRGGVLNVVRHSVEVYCRADSIPEKITIDLTGLQIGDSV 159
>gi|16124740|ref|NP_419304.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter
crescentus CB15]
gi|221233455|ref|YP_002515891.1| 50S ribosomal protein L25/general stress protein Ctc [Caulobacter
crescentus NA1000]
gi|71153131|sp|Q9AAV8.1|RL25_CAUCR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|254801041|sp|B8GZU9.1|RL25_CAUCN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|13421662|gb|AAK22472.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter
crescentus CB15]
gi|220962627|gb|ACL93983.1| LSU ribosomal protein L25P [Caulobacter crescentus NA1000]
Length = 197
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 21/204 (10%)
Query: 52 ETILAIP-RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGH 108
E IL + R GT + R+AG+VP +++ GG K I+V+ N+ RK
Sbjct: 3 EIILNVEVRDGAGTGNARATRRAGKVPGVLY-------GGGKAPVNIAVKANEFRK---- 51
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
S + +L V ++G EK V+ + V H TD P++ R L+KI
Sbjct: 52 ---SLYTGKLLGHLVTLQYGE----EKQSVIAKAVQFHPVTDEPVHFDLYRVDEHQLIKI 104
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
+VP+ F+ + S GL+KGG L I+ TV+ CPAD +P + +DL+ D+ I ++K
Sbjct: 105 EVPVHFKNHETSVGLKKGGTLEVIRHTVELACPADKIPEELVIDLAGHDIGDVIRISEVK 164
Query: 229 VHPALKLLRSKDEPVCKIAGGRAS 252
+ +K +D + + A+
Sbjct: 165 LPEGVKPAMDRDFVIANVKASSAA 188
>gi|294011768|ref|YP_003545228.1| ribosomal protein L25 [Sphingobium japonicum UT26S]
gi|390167703|ref|ZP_10219683.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingobium
indicum B90A]
gi|292675098|dbj|BAI96616.1| ribosomal protein L25 [Sphingobium japonicum UT26S]
gi|389589568|gb|EIM67583.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingobium
indicum B90A]
Length = 204
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 20/179 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLG 110
T+ A R G S R+ GRVP++++ G N+ + I V+ + KL+G
Sbjct: 6 TLSAEARDRAGKGASRALRREGRVPAVIY-------GNNEEPQSIHVEEKLLNKLLG--T 56
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
FF S +F E G +KVR L + V H TD PL+ FLR A + ++V
Sbjct: 57 GHFFNSVVF-----VEVGG----KKVRTLAKDVAFHPVTDRPLHADFLRVSEHATVHVNV 107
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
P++F+ +D SPGL+KGG LN + ++ + A +P + +DL+ LDV I G +K+
Sbjct: 108 PVIFKNEDASPGLKKGGVLNIVAHEIELIVDAAEIPDDVVIDLAGLDVGDSIHIGAVKL 166
>gi|295687989|ref|YP_003591682.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter
segnis ATCC 21756]
gi|295429892|gb|ADG09064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter
segnis ATCC 21756]
Length = 199
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 52 ETILAIP-RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGH 108
E IL + R GT + R+ G++P +++ GG K I+V+ N+ RK
Sbjct: 3 EIILNVEVRDGSGTGAARAVRREGKIPGVLY-------GGGKAPVNIAVRANEFRK---- 51
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
S + +L V + G EK V+ + V H TD P++ R L+KI
Sbjct: 52 ---SLYTGKLLGHLVTLQHGD----EKQSVIAKAVQFHPVTDEPVHFDLYRVDEHQLIKI 104
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
+VP+ F+ D+S GL+KGG L I+ TV+ CPAD +P + +DL+ D+ I ++K
Sbjct: 105 EVPVHFKNHDISVGLKKGGSLEVIRHTVELACPADKIPEELVIDLASHDIGDTIRISEVK 164
Query: 229 VHPALKLLRSKDEPVCKIAGGRAS 252
+ +K +D + + AS
Sbjct: 165 LPEGVKPAVDRDFVIATLKASSAS 188
>gi|399073436|ref|ZP_10750484.1| ribosomal protein L25, Ctc-form [Caulobacter sp. AP07]
gi|398041802|gb|EJL34857.1| ribosomal protein L25, Ctc-form [Caulobacter sp. AP07]
Length = 199
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 20/196 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGRSFFVS 116
R GT S + R+AG++P I++ GG K I+V++N+ RK + +
Sbjct: 11 RDRAGTGGSRETRRAGKIPGILY-------GGEKAPVNIAVKSNEFRK-------ALYTG 56
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
+L V + G +K V+ + + H TD P++ R L+KI VP+ F+
Sbjct: 57 KLLGHLVTLQHGE----DKQSVIAKAIQFHPVTDEPIHFDLFRVGEHQLIKIQVPVHFKN 112
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
D+S G++KGG L ++ TV+ CPAD +P + +DL+ D+ I ++K+ ++
Sbjct: 113 HDISVGMKKGGSLEIVRHTVELACPADAIPEELVIDLAHHDIGDTIRISEVKLPEGVRPA 172
Query: 237 RSKDEPVCKIAGGRAS 252
+ +D + + A+
Sbjct: 173 QDRDFVIANLKASAAA 188
>gi|85708586|ref|ZP_01039652.1| ribosomal protein L25 [Erythrobacter sp. NAP1]
gi|85690120|gb|EAQ30123.1| ribosomal protein L25 [Erythrobacter sp. NAP1]
Length = 228
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 16/161 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G S R+ GRVP++++ GG + ++ + ++LV L
Sbjct: 6 TLPAEARERAGKGASRALRREGRVPAVIY-------GGKEEPTTIHVEE-KELVKQLMTG 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F++ + +EV E +R LP+ V LH TD P + F R +A +++ +P+
Sbjct: 58 HFMNSIVKIEVGGE--------TIRTLPKDVALHPVTDRPTHADFFRLSRDAKVEVQIPV 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDL 213
VF G++ SPGL+KGG LN ++ + +C AD +P I++ +
Sbjct: 110 VFVGEEQSPGLKKGGVLNVVRHELDLICEADKIPGEIEISV 150
>gi|347528110|ref|YP_004834857.1| 50S ribosomal protein L25 [Sphingobium sp. SYK-6]
gi|345136791|dbj|BAK66400.1| 50S ribosomal protein L25 [Sphingobium sp. SYK-6]
Length = 207
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 20/172 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLG 110
T+ A R G S R+ GRVP++++ G N+ +++ V+ + KL+G
Sbjct: 6 TLSAEARDRAGKGASRALRREGRVPAVIY-------GNNEEPQMVHVEEKILSKLLG--- 55
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
F+ V E G +KVR LP+ V H TD PL+ FLR A + ++V
Sbjct: 56 ----TGHFFNSVVMVEVGG----KKVRTLPKDVAFHPVTDRPLHADFLRVSEHAQVHVNV 107
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
P+VF ++ +PGL++GG LN ++ ++ + A +P I VDL+ DV I
Sbjct: 108 PVVFENEEAAPGLKRGGVLNVVRHELEMIVDAAEIPDSITVDLTGFDVGDSI 159
>gi|254293130|ref|YP_003059153.1| 50S ribosomal protein L25/general stress protein Ctc [Hirschia
baltica ATCC 49814]
gi|254041661|gb|ACT58456.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hirschia
baltica ATCC 49814]
Length = 209
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S + R+ RVP+I++ GG + +S+ ++I +++ L F+S L
Sbjct: 12 RERTGKGGSRQARRENRVPAILY-------GGKEAPVSISLDRI-EILKALNTGKFLSNL 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
++E + + K V+P+ V H T+ L+V R + L+K++VP+ F G+D
Sbjct: 64 VEIEHKGK--------KQFVIPQDVQFHPVTEVALHVDLYRVKEDQLVKVEVPVHFTGED 115
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALKLLR 237
VSPG+++GG LN ++ TV+ PA +P ++ D+S LD+ + ++++ A +
Sbjct: 116 VSPGIKRGGSLNIVRHTVELEVPAGHIPEFLTGDVSSLDIGDNVKISNIELPKDATPTIT 175
Query: 238 SKDEPVCKIAGGRAS 252
+D + I G AS
Sbjct: 176 DRDFTIATIVGRTAS 190
>gi|182680481|ref|YP_001834627.1| 50S ribosomal protein L25/general stress protein Ctc [Beijerinckia
indica subsp. indica ATCC 9039]
gi|226736280|sp|B2IG64.1|RL25_BEII9 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|182636364|gb|ACB97138.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 221
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 20/173 (11%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLV--GHL 109
+T+ A R G + R+ GR+P +++ D I++ ++ KL+ GH
Sbjct: 5 KTLAATVRGGTGKGAARSIRREGRIPGVIYGGGDAPEP-----ITLDYRELNKLIYAGH- 58
Query: 110 GRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
F++ +FD+EV K RV+PR L PL+V FLR P A LK+
Sbjct: 59 ----FLTTIFDIEVEGA--------KQRVVPRDYQLDPVKGQPLHVDFLRLKPGATLKVS 106
Query: 170 VPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
VP+ F D+ PGL+KGG LN ++ ++ PAD +P + DL L++ + +
Sbjct: 107 VPIHFINADICPGLKKGGTLNIVRHAIELKVPADAMPDVLTADLHALEIAESM 159
>gi|149184486|ref|ZP_01862804.1| ribosomal protein L25 [Erythrobacter sp. SD-21]
gi|148831806|gb|EDL50239.1| ribosomal protein L25 [Erythrobacter sp. SD-21]
Length = 230
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 92/177 (51%), Gaps = 16/177 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G S R+ GRVP++++ GG + I + + ++LV LG
Sbjct: 6 TLPAETRERAGKGASRALRRDGRVPAVIY-------GGKEEPILIHV-EAKELVKQLGTG 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F++ + +E+ + K++ LP+ V LH D P +V F R +++ VP+
Sbjct: 58 HFMNSIVTIELGGK--------KIKTLPKDVSLHPVNDRPEHVDFFRMVKGGKIEVQVPV 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
VF ++ SPGL+KGG LN ++ + +C D +P I++D++ +V I ++K+
Sbjct: 110 VFTNEEASPGLKKGGVLNVVRHELDLVCENDKIPSEIEIDVTGKEVGDSIHISEVKL 166
>gi|87200131|ref|YP_497388.1| 50S ribosomal protein L25 [Novosphingobium aromaticivorans DSM
12444]
gi|109893374|sp|Q2G6G9.1|RL25_NOVAD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|87135812|gb|ABD26554.1| LSU ribosomal protein L25P [Novosphingobium aromaticivorans DSM
12444]
Length = 204
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 88/164 (53%), Gaps = 16/164 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ GR P++++ GGN+ +++ + + LV LG F + + +L V +
Sbjct: 24 RREGRTPAVIY-------GGNEEPVAIHLEE-KALVKALGTGHFFNSVVELTVGGQ---- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
VR LP+ V H TD P + FLR ++++ ++VP++F ++ SPGL+KGG LN
Sbjct: 72 ----TVRTLPKDVAFHPVTDRPEHADFLRVSKDSVVHVNVPVIFANEEKSPGLKKGGVLN 127
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
++ ++ +C D +P I +D++ +V I +K+ +K
Sbjct: 128 IVRHELELVCAPDAIPDDIVIDVAGYEVGDSIHISAVKLPAGVK 171
>gi|103487102|ref|YP_616663.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingopyxis
alaskensis RB2256]
gi|122985000|sp|Q1GSP2.1|RL25_SPHAL RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|98977179|gb|ABF53330.1| LSU ribosomal protein L25P [Sphingopyxis alaskensis RB2256]
Length = 212
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 91/170 (53%), Gaps = 16/170 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G S + R+ GRVP++V+ GG + + + + + L+ L
Sbjct: 6 TLTAETRERGGKGASRELRRNGRVPAVVY-------GGKEEPLMIHVEE-KLLMKQLMTG 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F++ + +EV + ++R LP+ V H D P++ FLR +A +++ VP+
Sbjct: 58 HFMNSVVMIEVGGK--------QIRTLPKDVAFHPVKDRPIHADFLRIAKDATVQVAVPV 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
VF+ ++ SPGL++GG LN ++ ++ +C AD +P I +D++ D+ I
Sbjct: 110 VFQNEEKSPGLKRGGVLNIVRHELELVCDADNIPDEIAIDVTGFDIGDSI 159
>gi|148284981|ref|YP_001249071.1| 50S ribosomal protein L25 [Orientia tsutsugamushi str. Boryong]
gi|166223699|sp|A5CF34.1|RL25_ORITB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|146740420|emb|CAM80897.1| 50S ribosomal protein L25 [Orientia tsutsugamushi str. Boryong]
Length = 207
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 19/208 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T++ R+ GT + R+ G+VP ++++ K + + + K V L R
Sbjct: 6 TLVGQLRSDFGTSSARALRRQGKVPGVIYK---------KGITPIHVCTLEKEVAKLYRK 56
Query: 113 -FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPE-ALLKIDV 170
FF S + L+V + + +VLP+ V LH T+ ++ F+ ++ K+ V
Sbjct: 57 PFFSSTVIQLQVDDQ--------RFKVLPKAVQLHPVTEFMNHIDFILVEQNGSMQKVKV 108
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVH 230
P+ F G + S G+++GGYLN +KR V LCP D +P I D++ + V I L++
Sbjct: 109 PISFEGKEKSLGIKRGGYLNIVKRYVDLLCPVDKIPQCIKCDIANVSVGASIKISRLELP 168
Query: 231 PALKLLRSKDEPVCKIAGGRASDQKKSK 258
L++S + V G++S Q K +
Sbjct: 169 EGCNLVKSTTDYVIASVIGKSSKQDKEE 196
>gi|406705753|ref|YP_006756106.1| 50S ribosomal protein L25 [alpha proteobacterium HIMB5]
gi|406651529|gb|AFS46929.1| LSU ribosomal protein L25P [alpha proteobacterium HIMB5]
Length = 237
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 16/160 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
RK G VP+IV+ +D N IS+ ++ LV + F S + L + + +
Sbjct: 21 RKEGNVPAIVYGGKD-----NNENISISKKTLKSLVE---KDNFYSNIISLNINGKTQN- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
VLPR+V H +D P++V F R P ++IDVP+ F + SPGL+KGG LN
Sbjct: 72 -------VLPREVIYHIISDEPIHVDFQRVVPGVKIRIDVPVQFINQEKSPGLKKGGVLN 124
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVH 230
++R V+ CP++ +P + +DL +D+ + +K+
Sbjct: 125 IVRRKVELRCPSEKIPESLVIDLDGVDIGESFKISSIKLE 164
>gi|167644635|ref|YP_001682298.1| 50S ribosomal protein L25/general stress protein Ctc [Caulobacter
sp. K31]
gi|189042349|sp|B0T899.1|RL25_CAUSK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|167347065|gb|ABZ69800.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter
sp. K31]
Length = 199
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 21/204 (10%)
Query: 52 ETILAIP-RASPGTRVSVKERKAGRVPSIVFEQEDGQHGG--NKRLISVQTNQIRKLVGH 108
E IL + R GT S + R+ G+VP +++ GG I+V+ N+ RK + H
Sbjct: 3 EIILNVEIRDRAGTGGSRETRRQGKVPGVLY-------GGPLAPVNIAVKGNEFRKAL-H 54
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
G+ + L L+ GD EK V+ + V H TD PL+ R L+KI
Sbjct: 55 TGK--LLGHLVTLQ------HGD--EKQSVIAKAVQFHPVTDEPLHFDLYRVDEHQLIKI 104
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
++P+ F+ D+S GL+KGG L I+ TV+ CPAD +P + +DL+ D+ I ++K
Sbjct: 105 EIPVHFKNHDISVGLKKGGTLEIIRHTVELACPADKIPEELVIDLASHDIGDTIRISEIK 164
Query: 229 VHPALKLLRSKDEPVCKIAGGRAS 252
+ ++ +D + + AS
Sbjct: 165 LPEGVRPAMERDFVIANLKASAAS 188
>gi|209965201|ref|YP_002298116.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodospirillum centenum SW]
gi|209958667|gb|ACI99303.1| ribosomal 5S rRNA E-loop binding protein L25 [Rhodospirillum
centenum SW]
Length = 205
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 24/167 (14%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFV 115
RA GT + + R+ GR+P++++ GNK +IS++ NQ + L R F
Sbjct: 14 RAGKGT--ARQTRREGRIPAVIY--------GNKEKPVMISLEFNQFFR---ELHRPGFF 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ LF + V RVLPR V +D PL+V FLR + + +P+ F
Sbjct: 61 THLFSITVDGA--------THRVLPRDVQFDPVSDRPLHVDFLRVSAATEIVVKIPVEFA 112
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
+ SPG+++GG LN ++ ++ C AD +P +I VDL++ D+ I
Sbjct: 113 NGETSPGIKRGGVLNIVRHEIEVFCRADNIPEHITVDLADADLNSSI 159
>gi|383774298|ref|YP_005453365.1| 50S ribosomal protein L25 [Bradyrhizobium sp. S23321]
gi|381362423|dbj|BAL79253.1| 50S ribosomal protein L25 [Bradyrhizobium sp. S23321]
Length = 242
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 24/204 (11%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRS 112
A R G + ER+AG+VP +++ GNK+ ISV ++R+ + GR
Sbjct: 10 ATARPKSGKGAARAERRAGKVPGVIY--------GNKQPPLPISVDDRELRQRI-LAGR- 59
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F++ L D+++ + K RV+PR HL D P++V F+R A ++I VPL
Sbjct: 60 -FLTTLVDIDLDGK--------KHRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPL 110
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
+ SPG+++GG +N + ++ C + +P +I+VD+ L++ + D+K+
Sbjct: 111 HVVKSESSPGVKRGGAVNIVAHAIELECGVENIPQFIEVDVGTLEIGHSLHLSDIKLPAG 170
Query: 233 LKLLRSKDEPVCKIA--GGRASDQ 254
+K L ++D + I G A +Q
Sbjct: 171 VKALTAEDATLVTIVPPSGYAEEQ 194
>gi|217977796|ref|YP_002361943.1| 50S ribosomal protein L25/general stress protein Ctc [Methylocella
silvestris BL2]
gi|254801056|sp|B8EK41.1|RL25_METSB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|217503172|gb|ACK50581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocella
silvestris BL2]
Length = 227
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 22/174 (12%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGN-KRLISVQTNQIRKLV--GH 108
+T+ A R G + R+ GR+P +++ GG+ I++ ++ KL+ GH
Sbjct: 5 KTLAAAARHGTGKGAARSVRREGRIPGVIY------GGGDPAEPITLDYRELNKLIYAGH 58
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
F++ LF+++V K RV+PR L D PL+V FLR P A LK+
Sbjct: 59 -----FLTTLFEIDVAGT--------KQRVIPRDYQLDPIKDLPLHVDFLRLKPGASLKV 105
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
+VP+ F + PG++KGG +N ++ +++ PAD +P I DL EL++ +
Sbjct: 106 EVPVHFLNQETCPGVKKGGSVNIVRHSIELRVPADDIPEAITADLGELEINDSL 159
>gi|148260671|ref|YP_001234798.1| 50S ribosomal protein L25/general stress protein Ctc [Acidiphilium
cryptum JF-5]
gi|326403865|ref|YP_004283947.1| 50S ribosomal protein L25 [Acidiphilium multivorum AIU301]
gi|338980520|ref|ZP_08631790.1| 50S ribosomal protein L25 [Acidiphilium sp. PM]
gi|166223656|sp|A5FZ47.1|RL25_ACICJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|146402352|gb|ABQ30879.1| LSU ribosomal protein L25P [Acidiphilium cryptum JF-5]
gi|325050727|dbj|BAJ81065.1| 50S ribosomal protein L25 [Acidiphilium multivorum AIU301]
gi|338208553|gb|EGO96402.1| 50S ribosomal protein L25 [Acidiphilium sp. PM]
Length = 217
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGR 111
ETI A RA G V+ R+AG+VP++++ G K+ ++ R ++ + R
Sbjct: 5 ETIAAEDRARAGKGVARATRRAGKVPAVIY--------GAKQEPTLIALDPRIVLREMKR 56
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
+ SRL+++E S K R L R + LH TD P +V F R +++ V
Sbjct: 57 GGWRSRLYEIETASG--------KARALMRDIQLHPVTDQPEHVDFQRLAAGEPVRVAVN 108
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
+ F + +S G+++GG LN ++ V+ LC D +P + + DL LD+ I DLK
Sbjct: 109 VNFLNELISVGMKRGGVLNVVRHAVEVLCDPDHIPDHFEADLGPLDINDNIRWSDLK 165
>gi|399063059|ref|ZP_10746778.1| ribosomal protein L25, Ctc-form [Novosphingobium sp. AP12]
gi|398032813|gb|EJL26139.1| ribosomal protein L25, Ctc-form [Novosphingobium sp. AP12]
Length = 203
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 16/174 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R G S R+ GRVP++V+ GG + +++ + ++L L F
Sbjct: 9 AETRERAGKGASRDLRRNGRVPAVVY-------GGKEEPLAIHLEE-KELTRQLMTGHFF 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + ++EV + K R P+ V H +D PL+ FLR A + ++VP+VF
Sbjct: 61 NSIIEIEVGGK--------KYRTQPKDVAFHPVSDRPLHADFLRVAKGATVHVNVPVVFE 112
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
++ SPGL++GG LN ++ ++ +C A+ +P I +D++ D+ + I +K+
Sbjct: 113 NEEASPGLKRGGVLNIVRHDLELVCDAEKIPHEITIDVTGFDLGESIHFSHVKL 166
>gi|452751105|ref|ZP_21950851.1| LSU ribosomal protein L25p [alpha proteobacterium JLT2015]
gi|451961255|gb|EMD83665.1| LSU ribosomal protein L25p [alpha proteobacterium JLT2015]
Length = 223
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQ--IRKLVGHLG 110
TI A R G S R GRVP++++ G K IS+ + +RKL L
Sbjct: 6 TIAAQLREKAGKGASRAMRNEGRVPAVIY-------GDKKEPISIHVEEKVLRKL---LN 55
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
F+S + +EV E G E+ R LP+ V LH TD P++V F+R + ++V
Sbjct: 56 TGHFLSSVVMVEV--EGG-----EEHRTLPKDVQLHPVTDRPMHVDFMRLAKGQKIAVNV 108
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
P+ F G+D SPGL +GG LN ++ V+ C ++P + V L L++ I
Sbjct: 109 PMNFEGEDDSPGLTRGGVLNIVRHEVEVHCRPSLIPSELTVSLKGLEIGDSI 160
>gi|154252704|ref|YP_001413528.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Parvibaculum
lavamentivorans DS-1]
gi|171769611|sp|A7HVD8.1|RL25_PARL1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|154156654|gb|ABS63871.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Parvibaculum
lavamentivorans DS-1]
Length = 216
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 88/164 (53%), Gaps = 23/164 (14%)
Query: 63 GTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFVSRL 118
G++ +V+ R+AGRVP++++ G+K+ LI+V + L F+S +
Sbjct: 15 GSKGAVRSLRRAGRVPAVIY--------GDKQSPELIAVSYKDVSAL---YQTGTFMSHV 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
D+E+ G E RV+PR V D ++V FLR A + +DVP+ F +
Sbjct: 64 LDVEI------GGKTE--RVIPRDVQFEPVRDFIIHVDFLRLGKNATVTVDVPVHFHNHE 115
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
SPG++ GG LN ++ V+ +CPAD +P +D+DL+ ++ I
Sbjct: 116 ASPGIKAGGVLNIVRHEVELVCPADAIPEQLDIDLTGFEMGSSI 159
>gi|312114466|ref|YP_004012062.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Rhodomicrobium vannielii ATCC 17100]
gi|311219595|gb|ADP70963.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Rhodomicrobium vannielii ATCC 17100]
Length = 205
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 76 VPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEK 135
VP IV+ GG K +V + R + H F+S ++ L++ + K
Sbjct: 29 VPGIVY-------GGEKGPANVAL-EYRHVWQHYQTGHFLSTVYLLDIDGK--------K 72
Query: 136 VRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRT 195
RV+PR V + D P++V FLR + +++++P+ F ++ SPGL++GG LN ++
Sbjct: 73 ERVIPRDVQVDPVRDFPIHVDFLRVSKSSRIEVEIPVHFVNEEASPGLKRGGALNIVRHA 132
Query: 196 VKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK-LLRSKDEPVCKIAG 248
V+ CPAD +P +I VDL+ D+ I +K+ + + +D V IAG
Sbjct: 133 VELSCPADSIPEFITVDLTGYDIGDSIHISAVKLPAGITPTITDRDFTVATIAG 186
>gi|189184105|ref|YP_001937890.1| 50S ribosomal protein L25/general stress protein Ctc [Orientia
tsutsugamushi str. Ikeda]
gi|226736344|sp|B3CTF9.1|RL25_ORITI RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189180876|dbj|BAG40656.1| 50S ribosomal protein L25 [Orientia tsutsugamushi str. Ikeda]
Length = 207
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 19/208 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T++ R+ GT + R+ G+VP ++++ K + + + K V L R
Sbjct: 6 TLVGQLRSDFGTSSARALRRQGKVPGVIYK---------KGITPIHVCTLEKEVAKLYRK 56
Query: 113 -FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEA-LLKIDV 170
FF S + L+V + + +VLP+ V LH T+ ++ F+ + K+ V
Sbjct: 57 PFFSSTVIQLQVDDQ--------RFKVLPKAVQLHPVTEFINHIDFILVEQNGGIQKVKV 108
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVH 230
P+ F G D S G+++GGYLN +KR V LCP D +P I D++ + V I L++
Sbjct: 109 PISFEGKDKSLGIKRGGYLNIVKRYVDLLCPVDKIPQCIKCDIANVPVGASIKVSRLELP 168
Query: 231 PALKLLRSKDEPVCKIAGGRASDQKKSK 258
L++ + V G++S Q K +
Sbjct: 169 EGCNLVKRTTDYVIASVIGKSSKQDKEE 196
>gi|323136056|ref|ZP_08071139.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocystis
sp. ATCC 49242]
gi|322399147|gb|EFY01666.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocystis
sp. ATCC 49242]
Length = 209
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 22/174 (12%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLV--GH 108
+T+ A R+ G + R+ GR+P++++ GG L IS+ +L+ GH
Sbjct: 5 KTLAATVRSGTGKGAARSVRREGRIPAVLY------GGGEAPLPISLDKKVTTQLIFAGH 58
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
F++ +F+L++ + K R +PR L D PL+V FLR P + LK+
Sbjct: 59 -----FLTTIFELDIDGK--------KERAIPRDYQLDVVKDFPLHVDFLRLKPGSRLKV 105
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
+VP+ F D +PG+++GG LN + TV+ PAD +P I DL+ +D +
Sbjct: 106 NVPVHFINQDAAPGIKRGGSLNIVYHTVEMWVPADNIPEAITADLAGMDFNDSL 159
>gi|426400541|ref|YP_007019513.1| 50S ribosomal protein L25 [Candidatus Endolissoclinum patella L2]
gi|425857209|gb|AFX98245.1| ribosomal protein L25, Ctc-form [Candidatus Endolissoclinum patella
L2]
Length = 217
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 84/159 (52%), Gaps = 16/159 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G VP+I++ G K I+VQ + R+L L R F SRL L+V +E
Sbjct: 36 RRQGFVPAIIY-------GEKKTPIAVQVLR-RELDKILNRPGFFSRLIFLKVGTE---- 83
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
RVLPR + H +D P N+ FLR A+L + VP+ F ++SPG++ GG LN
Sbjct: 84 ----NYRVLPRDLQRHPVSDLPWNIDFLRVSASAVLTVAVPIEFINKNISPGVKSGGVLN 139
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
++ +++ C + +P + +DLS+ + + I + +
Sbjct: 140 VMRHSIEVYCQVENIPDKLTIDLSDAKLGESIYVSSISL 178
>gi|303284975|ref|XP_003061778.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457108|gb|EEH54408.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 254
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 14/179 (7%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQ--EDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVS 116
R + G + K RK GRVP+I+F G+H IS+ I +LV G +
Sbjct: 69 RDASGRIAAKKLRKEGRVPAILFRSGSRAGEH------ISLALKDIERLVTKHGHVGVGT 122
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
R+ + + D+I K +VHL GT N TF+ P + +DVP+ F G
Sbjct: 123 RVLKMRFEGTDRAEDVIAK------QVHLTMGTGVVENATFMPVEPTTEVNVDVPVTFIG 176
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
+DV PG+++GG+ ++R+V C +P ++D+S V + + DL V ++KL
Sbjct: 177 EDVCPGVKQGGFPWVMRRSVPVKCQVKDIPRVFNIDVSNFSVGKVVFLKDLHVPESVKL 235
>gi|433773544|ref|YP_007304011.1| ribosomal protein L25, Ctc-form [Mesorhizobium australicum WSM2073]
gi|433665559|gb|AGB44635.1| ribosomal protein L25, Ctc-form [Mesorhizobium australicum WSM2073]
Length = 213
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K++VLP+ L D P++V FLR + + +DVP+ F +D SPG+++GG LN ++
Sbjct: 72 KKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPGIKRGGVLNIVR 131
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK-LLRSKDEPVCKIAGGRA 251
V+F CPA+ +P +I VDL+ D+ I +K+ +K ++ +D + +AG A
Sbjct: 132 HEVEFHCPANAIPEFITVDLTGADIGDSIHISSVKLPAGVKPVISDRDFTIATVAGSSA 190
>gi|94498282|ref|ZP_01304842.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingomonas
sp. SKA58]
gi|94422284|gb|EAT07325.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingomonas
sp. SKA58]
Length = 208
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 20/172 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLG 110
T+ A R G S R+ GRVP++++ G N+ + I V+ + KL LG
Sbjct: 6 TLSAEARDRAGKGASRALRREGRVPAVIY-------GNNEEPQSIHVEEKLLSKL---LG 55
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
F + + +EV + VR LP+ V H TD PL+ FLR A + ++V
Sbjct: 56 TGHFFNSVVMVEVNGK--------AVRTLPKDVAFHPVTDRPLHADFLRVSEHATVNVNV 107
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
P+ F +D +PGL+KGG LN ++ V+ + A +P + VDL +V I
Sbjct: 108 PVRFENEDAAPGLKKGGVLNVVRHDVELIVDAANIPEDVVVDLKGFEVGDSI 159
>gi|393774509|ref|ZP_10362871.1| 50S ribosomal protein L25 [Novosphingobium sp. Rr 2-17]
gi|392719992|gb|EIZ77495.1| 50S ribosomal protein L25 [Novosphingobium sp. Rr 2-17]
Length = 202
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 87/164 (53%), Gaps = 16/164 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S + R+ GRVP++V+ GG +++ + ++L LG F + +
Sbjct: 12 RERAGKGASRELRRTGRVPAVVY-------GGKSEPLAIHLEE-KELARQLGTGHFFNSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
++E+ + K R P+ V H + PL+ FLR A + ++VP+VF ++
Sbjct: 64 IEIEIDGK--------KHRTQPKDVAFHPVSARPLHADFLRIAKGATVHVNVPVVFINEE 115
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
+SPGL++GG LN ++ ++ +C A+ +P I +D++ D+ + I
Sbjct: 116 LSPGLKRGGVLNIVRHDLELVCDAEKIPHEIAIDVTGFDLGESI 159
>gi|412987953|emb|CCO19349.1| 50S ribosomal protein L25/general stress protein Ctc [Bathycoccus
prasinos]
Length = 287
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 100/196 (51%), Gaps = 9/196 (4%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R G + + RK G +P VF+Q G+ + +V ++ KL+ +
Sbjct: 95 LIAHDREKAGRLSANRARKDGFIPCAVFKQ--GEIEKTSEVCAVSEREVEKLLRKFTKYG 152
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
++L D+ + D V+ +P+++ +H+ + N+TF+R PE ++K+ +P+
Sbjct: 153 LRTKLIDIVL------DDGKRTVKAIPQQIQMHAYKNQVNNITFMRVDPETIVKVPIPVK 206
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
G D PG + G +++ ++T+K C +D +P VD+S ++V+ + +L + +
Sbjct: 207 VTGQDDCPGTKLGAFVSHTRKTIKVKCRSDQIPEAFFVDVSNMNVKDNVKIANLDIPEGV 266
Query: 234 KLLRSKDE-PVCKIAG 248
+ E P+ K+AG
Sbjct: 267 VICEHDLETPIVKMAG 282
>gi|337266802|ref|YP_004610857.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium
opportunistum WSM2075]
gi|336027112|gb|AEH86763.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium
opportunistum WSM2075]
Length = 212
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K++VLP+ L D P++V FLR + + +DVP+ F +D SPG+++GG LN ++
Sbjct: 72 KKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPGIKRGGVLNIVR 131
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK-LLRSKDEPVCKIAGGRA 251
V+F CPA+ +P +I +DL+ ++ I +K+ +K ++ +D V IAG A
Sbjct: 132 HEVEFHCPANAIPEFITIDLTGTNIGDSIHISAVKLPAGVKPVISDRDFTVATIAGSSA 190
>gi|319781882|ref|YP_004141358.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317167770|gb|ADV11308.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 213
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K++VLP+ L D P++V FLR + + +DVP+ F +D SPG+++GG LN ++
Sbjct: 72 KKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPGIKRGGVLNIVR 131
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK-LLRSKDEPVCKIAGGRA 251
V+F CPA+ +P +I VDL+ ++ I +K+ +K ++ +D + IAG A
Sbjct: 132 HEVEFHCPANAIPEFITVDLTGANIGDSIHISAVKLPAGVKPVISDRDFTIATIAGSSA 190
>gi|254456302|ref|ZP_05069731.1| ribosomal protein L25, Ctc-form [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083304|gb|EDZ60730.1| ribosomal protein L25, Ctc-form [Candidatus Pelagibacter sp.
HTCC7211]
Length = 232
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R G VP+I++ G N++ IS+ ++ L+ + F+S + L V + +
Sbjct: 21 RNNGNVPAIIY----GGEAQNEK-ISISKKLLKSLIE---KENFLSNIVTLNVDGKSQN- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
VLP+++ H +D P++V FLR P +KI+VP+ F + SPGL++GG LN
Sbjct: 72 -------VLPKEIKYHIISDEPIHVDFLRVVPGLKIKIEVPVQFINHEKSPGLKRGGVLN 124
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK-LLRSKDEPVCKIAG 248
++R V+ CP++ +P + +DL +D+ + +K+ ++ +R +D + +A
Sbjct: 125 IVRRKVELRCPSEKIPESLVIDLDGIDIGESFKISSIKLETDVEPTIRGRDFVIATLAA 183
>gi|85373995|ref|YP_458057.1| 50S ribosomal protein L25/general stress protein Ctc [Erythrobacter
litoralis HTCC2594]
gi|122544539|sp|Q2NAN1.1|RL25_ERYLH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|84787078|gb|ABC63260.1| ribosomal protein L25 [Erythrobacter litoralis HTCC2594]
Length = 229
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 86/170 (50%), Gaps = 16/170 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G S R+ GRVP++++ GG + + + + L+ L
Sbjct: 6 TLPAEARERAGKGASRALRREGRVPAVIY-------GGKEEPTMIHVEE-KLLIKQLMTG 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F++ + ++E+ + VR LP+ V LH +D P + F R +++ VP+
Sbjct: 58 HFMNSIVEIEIGGK--------TVRTLPKDVALHPVSDRPEHADFFRLAKGGKIEVSVPV 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
VF ++ SPGL+KGG LN ++ ++ +C D +P I++D++ +V I
Sbjct: 110 VFMNEEASPGLKKGGVLNVVRHELELVCENDKIPGEIEIDVTGKEVGDSI 159
>gi|255086031|ref|XP_002508982.1| predicted protein [Micromonas sp. RCC299]
gi|226524260|gb|ACO70240.1| predicted protein [Micromonas sp. RCC299]
Length = 226
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 12/204 (5%)
Query: 46 PDPRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKL 105
PD + D I +PR G V+ + R+ G VP ++F D Q G L+ + + +L
Sbjct: 31 PDLKGDN-IDVMPRTGTGKTVTKRLRRDGLVPGVLFGPGD-QTG---ELLQMPKQDVERL 85
Query: 106 VGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEAL 165
V G S +R+ L D + K VL ++V + NV F+ PE
Sbjct: 86 VRIYGLSGIGARILTLNFP------DGVRKQDVLAKQVIYDATNINVENVNFMPCGPETE 139
Query: 166 LKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAG 225
+K+ VP+ GDD PG++KGG+ + +T+ C +P I ++S +DV K+
Sbjct: 140 VKVKVPVRVEGDDACPGIKKGGFAWKLHKTLTVTCKGKDIPSEIVSNISAMDVGDKVFLR 199
Query: 226 DLKVHPALKLLRSKDE-PVCKIAG 248
DL + +++ + D+ P+ KIAG
Sbjct: 200 DLDIPEGVRVHMTDDKVPIIKIAG 223
>gi|220922771|ref|YP_002498073.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium nodulans ORS 2060]
gi|254801055|sp|B8IFN5.1|RL25_METNO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|219947378|gb|ACL57770.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium nodulans ORS 2060]
Length = 211
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 17/192 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A+ R G + R+ GRVP++++ G + + IS+ NQ L+ G F+
Sbjct: 9 AVARDRVGKGAARAVRRQGRVPAVIYGG-----GQSPQSISLDANQTHHLIYGGG---FL 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ +F++EV K+R +PR L D PL+V FLR + ++VP+ F
Sbjct: 61 TTVFEIEVGGR--------KIRAIPRDYQLDPVKDLPLHVDFLRVTAGQTVAVEVPVHFV 112
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
D +PGL+ K G LN + TV D +P IDVDL+ D+ I DL +
Sbjct: 113 NQDAAPGLKQKSGMLNVVHHTVALEVSPDAIPDAIDVDLTGKDIGDTIHVSDLALPAGAS 172
Query: 235 LLRSKDEPVCKI 246
L E V +
Sbjct: 173 LALDPSETVATL 184
>gi|288958834|ref|YP_003449175.1| 50S ribosomal protein L25 [Azospirillum sp. B510]
gi|288911142|dbj|BAI72631.1| large subunit ribosomal protein L25 [Azospirillum sp. B510]
Length = 198
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 22/173 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGRSFFVS 116
RA GT + + R+ GR+P++++ GG + IS++ + +++ G F +
Sbjct: 14 RAGKGT--ARQTRRDGRIPAVIY-------GGKQAPVTISLEKFEFTRVLHQPG---FFT 61
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
LFD+ V G+ RVLPR V H +D PL+V FLR + + + VP+ F
Sbjct: 62 HLFDVTVD---GTAH-----RVLPRDVQFHPVSDIPLHVDFLRVSSDTRINVQVPVEFAD 113
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+ S GL++GG LN ++ ++ CPAD +P +I + DV I +K+
Sbjct: 114 QEKSAGLKRGGVLNIVRHELELSCPADNIPEHITISCEGFDVGDSIHISAVKL 166
>gi|357026103|ref|ZP_09088211.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium
amorphae CCNWGS0123]
gi|355542067|gb|EHH11235.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium
amorphae CCNWGS0123]
Length = 213
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K++VLP+ L D P++V FLR + + +DVP+ F +D SPG+++GG LN ++
Sbjct: 72 KKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPGIKRGGVLNIVR 131
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK-LLRSKDEPVCKIAGGRA 251
V+F CPA+ +P +I VDL+ D+ I + + +K ++ +D + IAG A
Sbjct: 132 HEVEFHCPANAIPEFITVDLTGADIGDSIHISAVTLPAGVKPVISDRDFTIATIAGSSA 190
>gi|114328980|ref|YP_746137.1| 50S ribosomal protein L25 [Granulibacter bethesdensis CGDNIH1]
gi|114317154|gb|ABI63214.1| LSU ribosomal protein L25P [Granulibacter bethesdensis CGDNIH1]
Length = 219
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R+ G + R+ G+VP++++ LI + I + L R
Sbjct: 13 IEAEARSRAGKGAARATRREGKVPAVIYGARQ-----TPDLIKLDPRIIHR---ELNRGG 64
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
+ SRL+++ V R L R V H TDAP +V F R +++ V +
Sbjct: 65 WRSRLYEINVDGA--------STRALIRDVQFHPVTDAPEHVDFQRLAAGEPVRVAVAVQ 116
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
F+ + SPGL++GG LN ++ TV+ LC D VP + + DL LD+ I DLK
Sbjct: 117 FQNEATSPGLKRGGVLNIVRHTVEVLCDPDHVPEHFEADLGTLDIGDNIRWSDLK 171
>gi|414341970|ref|YP_006983491.1| 50S ribosomal protein L25 [Gluconobacter oxydans H24]
gi|411027305|gb|AFW00560.1| 50S ribosomal protein L25 [Gluconobacter oxydans H24]
Length = 215
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+AG VP++++ G K+ S+ R ++ L R + SR+++L
Sbjct: 21 RRAGLVPAVIY--------GGKQEPSIIALDPRVIMKELHRGGWSSRVYNLAAEGA---- 68
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
E V L R V LH TDAP++V F R + ++V +VF G++ +PG+++GG LN
Sbjct: 69 ---EPVAALIRDVQLHPVTDAPIHVDFQRVSAGTKVHVEVSIVFTGEEKAPGIKRGGVLN 125
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGR 250
++ V +P + DLS LD+ + DLK + L GG+
Sbjct: 126 VVRHYVDVAADPANIPEHFTADLSALDIHDSVRWADLKGTEGVAL-----------TGGQ 174
Query: 251 ASD 253
A+D
Sbjct: 175 ATD 177
>gi|402771718|ref|YP_006591255.1| 50S ribosomal protein L25 [Methylocystis sp. SC2]
gi|401773738|emb|CCJ06604.1| 50S ribosomal protein L25 [Methylocystis sp. SC2]
Length = 216
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 90/173 (52%), Gaps = 24/173 (13%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLV--GHL 109
+ A R+ G + R+ GR+P++++ GG + + +S++ + +L+ GH
Sbjct: 12 LAATVRSGTGKGAARSVRREGRIPAVLY-------GGGEAPQPLSLEKKSLSQLIFAGH- 63
Query: 110 GRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
F++ +F+L++ + K R +PR L D P++V FLR P + L++
Sbjct: 64 ----FLTTIFELDIDGK--------KERAIPRDYQLDVIKDTPMHVDFLRLKPGSRLRVQ 111
Query: 170 VPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
VP+ F + +PG+++GG LN + TV+ PAD +P I DL+ +D +
Sbjct: 112 VPVHFTNQEAAPGIKRGGALNIVYHTVEMWVPADNIPEAITADLTGMDFNDSL 164
>gi|374292402|ref|YP_005039437.1| 50S ribosomal protein L25 [Azospirillum lipoferum 4B]
gi|357424341|emb|CBS87208.1| 50S ribosomal protein L25 [Azospirillum lipoferum 4B]
Length = 198
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 22/173 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGRSFFVS 116
RA GT + + R+ GR+P++++ GG + IS++ + +++ G F +
Sbjct: 14 RAGKGT--ARQTRRDGRIPAVIY-------GGKQAPLTISLEKFEFTRVLHQPG---FFT 61
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
LF++ V G+ RVLPR V H TD PL+V FLR + + VP+ F
Sbjct: 62 HLFEVTVD---GTAH-----RVLPRDVQFHPVTDVPLHVDFLRVSADTRTNVQVPVEFVD 113
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+ S GL++GG LN ++ ++ CPAD +P +I + DV I +K+
Sbjct: 114 QEKSAGLKRGGVLNIVRHELELSCPADSIPEHITISCEGFDVGDSIHISSVKL 166
>gi|384263337|ref|YP_005418525.1| 50S ribosomal protein L25 [Rhodospirillum photometricum DSM 122]
gi|378404439|emb|CCG09555.1| 50S ribosomal protein L25 [Rhodospirillum photometricum DSM 122]
Length = 261
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P +++ G ++ ++ R ++G + R+ F +RLFD+ V E
Sbjct: 85 RREGLIPGVIY--------GGRQAPALVAIDPRVVLGEMKRAGFSTRLFDILVDGESAG- 135
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
RV+ V +H TD P++ FLR E + ++VP+ F + SPGL++GG LN
Sbjct: 136 ------RVMIHDVQMHPVTDMPIHADFLRVDAETEVTVEVPVHFINETRSPGLKRGGVLN 189
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK-LLRSKDEPVCKIA 247
++ V+ + D++P ++VDL+ L++ + + + ++ + +D +C IA
Sbjct: 190 IVRHEVEVVGKPDLLPAALEVDLTGLEISDSVHISAVAIPAGVRPTITERDFTLCTIA 247
>gi|349687297|ref|ZP_08898439.1| 50S ribosomal protein L25/general stress protein Ctc
[Gluconacetobacter oboediens 174Bp2]
Length = 206
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 15/158 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+AG VP +++ GG + I + + R + L ++ + SR++D+ V E G+
Sbjct: 24 RRAGHVPGVIY-------GGGQEPILIALDP-RIVNRELHKAGWRSRIYDISV--EGGA- 72
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
V L R++ LH TDAPL+V + R + ++V + F G+DVSPG+++GG +N
Sbjct: 73 ----SVHALLREIQLHPVTDAPLHVDYQRLAAGHKVHVEVEVRFTGEDVSPGVKRGGVMN 128
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
++ TV + +P + DLS+LD + DLK
Sbjct: 129 IVRHTVDVVVDPANIPEFFTADLSKLDFHDNVRWNDLK 166
>gi|398384279|ref|ZP_10542312.1| ribosomal protein L25, Ctc-form [Sphingobium sp. AP49]
gi|397722875|gb|EJK83404.1| ribosomal protein L25, Ctc-form [Sphingobium sp. AP49]
Length = 203
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G S R+ GRVP++++ G N+ +S+ + + L LG
Sbjct: 6 TLSAEARDRAGKGASRALRREGRVPAVIY-------GMNEEPLSIHVEE-KLLNKQLGTG 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F + + +EV + VR L + V H TD PL+ FLR A + + VP+
Sbjct: 58 HFFNSVIMVEVGGK--------TVRTLAKDVAFHPVTDRPLHADFLRVSEHATVTVAVPV 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
F +D SPGL+KGG LN ++ V+ + A +P + VDL DV I
Sbjct: 110 RFENEDASPGLKKGGVLNIVRHDVELVVDAAEIPDDVVVDLKGFDVGDSI 159
>gi|13472406|ref|NP_103973.1| 50S ribosomal protein L25 [Mesorhizobium loti MAFF303099]
gi|71153162|sp|Q98HV7.1|RL25_RHILO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|14023152|dbj|BAB49759.1| 50S ribosomal protein L25 [Mesorhizobium loti MAFF303099]
Length = 213
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K++VLP+ L D P++V FLR + + +DVP+ F +D SPG+++GG LN ++
Sbjct: 72 KKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPGIKRGGVLNIVR 131
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK-LLRSKDEPVCKIAGGRA 251
V+F CPA+ +P +I +DL+ ++ I +++ +K ++ +D + IAG A
Sbjct: 132 HEVEFHCPANAIPEFITIDLTGTNIGDSIHISAVQLPAGVKPVISDRDFTIATIAGSSA 190
>gi|365898281|ref|ZP_09436247.1| 50S ribosomal protein L25 [Bradyrhizobium sp. STM 3843]
gi|365420969|emb|CCE08789.1| 50S ribosomal protein L25 [Bradyrhizobium sp. STM 3843]
Length = 233
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 81/144 (56%), Gaps = 11/144 (7%)
Query: 95 ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLN 154
ISV+ ++R+ +G GR F++ +FD+ + + K RV+PR HL D PL+
Sbjct: 43 ISVEDRELRQRIG-AGR--FLTTIFDISLDGK--------KHRVIPRDFHLDPVKDFPLH 91
Query: 155 VTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
V F+R A +++ VPL + SPG+++GG +N + T++ C A+ +P YI+ D+
Sbjct: 92 VDFMRLGQGATIRVSVPLHVVNAETSPGVKRGGTVNIVTHTLELECLAENIPQYIEADVG 151
Query: 215 ELDVEQKILAGDLKVHPALKLLRS 238
L++ + D+K+ +K LR
Sbjct: 152 GLEINNSLHMSDVKLPTGVKPLRG 175
>gi|197106324|ref|YP_002131701.1| 50S ribosomal protein L25 [Phenylobacterium zucineum HLK1]
gi|226736347|sp|B4R8Q7.1|RL25_PHEZH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|196479744|gb|ACG79272.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Phenylobacterium zucineum HLK1]
Length = 208
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 20/173 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGRSFFVS 116
R GT + R++G VP +++ GG+K I+V+ N+ RK + +
Sbjct: 11 RERTGTGGARDTRRSGMVPGVLY-------GGDKDPVAIAVRANEFRK-------ALYTG 56
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
+L V ++G+ E V+ + V +H TD P + R +KI+VP+ F
Sbjct: 57 KLLGHLVTLKYGN----ETQPVIAKAVDMHPVTDEPQHFDLYRVDEHQQIKIEVPVHFTN 112
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
D SPGL++GG LN T+ CPAD +P I DL+ L++ I DLK+
Sbjct: 113 QDDSPGLKRGGTLNVALHTLTVSCPADSIPEEIVFDLTGLEIGATIRVADLKL 165
>gi|413933668|gb|AFW68219.1| hypothetical protein ZEAMMB73_040273, partial [Zea mays]
Length = 201
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Query: 50 YDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHL 109
Y TI A+PR + G R + +ER+ GRVP+++ G + T R+L L
Sbjct: 34 YHHTIQAVPRETAGPRAAARERRHGRVPAVLLTLAGAAPGNGIAHRHLLTADRRQLAEML 93
Query: 110 GRS-FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
+S +F+S L+VR+ S ++ VLP KVH + LN+ ++A +LK+
Sbjct: 94 KQSPYFLSTPVRLQVRAGERSNAILHAGTVLPIKVHRDENSGNILNLVMVKADEGTMLKV 153
Query: 169 DVPLVFRGDDVSPGLRKG 186
D+P+ F+G D PGL+KG
Sbjct: 154 DLPVEFKGKDACPGLKKG 171
>gi|452963747|gb|EME68806.1| ribosomal protein L25 [Magnetospirillum sp. SO-1]
Length = 202
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 15/177 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
I A R G + R+AG+VP +++ G K I +Q + R + + ++
Sbjct: 6 AIAAELRDGSGKGAARATRRAGKVPGVIY-------GDKKAAICIQMDP-RVVWAQISKT 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F ++LF++++ + K L R V +H TD P+++ F+R + + + VP+
Sbjct: 58 GFFTQLFNVDLGKD-------GKHLCLARDVQMHPVTDQPIHLDFMRVSADHAIHVKVPV 110
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F D SPG++KGG LN ++ C + +P I +DLS L++ + DLK+
Sbjct: 111 HFANDTKSPGIKKGGVLNVELHEIEITCSPNDIPHEILIDLSGLEIGDSVHLSDLKL 167
>gi|316935875|ref|YP_004110857.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5
[Rhodopseudomonas palustris DX-1]
gi|315603589|gb|ADU46124.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Rhodopseudomonas palustris DX-1]
Length = 229
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 95 ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLN 154
ISV+ ++R + GR F++ +FD+ + + K RV+PR HL D PL+
Sbjct: 43 ISVEEKELRLRI-LAGR--FLTTIFDVVLDGQ--------KHRVIPRDYHLDPVKDFPLH 91
Query: 155 VTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
V FLR A ++I VPL +G +V+PG+++GG N + TV PAD +P +I+ D+S
Sbjct: 92 VDFLRLGAGATIRISVPLHLKGLEVAPGVKRGGTFNIVTHTVDLEAPADNIPQFIEADVS 151
Query: 215 ELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA 247
LD+ + D+ + +K + +D + I
Sbjct: 152 NLDIGVSLHLSDIALPTGVKSVSREDVTLVTIV 184
>gi|83595075|ref|YP_428827.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodospirillum rubrum ATCC 11170]
gi|109893389|sp|Q2RMV5.1|RL25_RHORT RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|83577989|gb|ABC24540.1| LSU ribosomal protein L25P [Rhodospirillum rubrum ATCC 11170]
Length = 210
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLG 110
T+ A R G + R+ G+VP++++ GG + L+S+ I +
Sbjct: 6 TLSAKGRDRAGKGAARATRREGQVPAVIY-------GGRQDPVLLSLAPRLIHT---EMR 55
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
++ F SRLFDL V E RV+ + V H TD P++V FLR + + + +
Sbjct: 56 KAGFSSRLFDLTVEGG-------ETHRVMVQDVQFHPVTDMPIHVDFLRIGKDTEVTVAI 108
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVH 230
P+ F + SPGL++GG LN ++ ++ D +P + +VDL+ +V I G +K+
Sbjct: 109 PVHFINETASPGLKRGGVLNVVRHEIEVHGRPDALPDFFEVDLTGAEVGDSIHVGVVKIP 168
Query: 231 PALK-LLRSKDEPVCKIA 247
++ ++ +D +C IA
Sbjct: 169 EGVRPVIAERDFTICTIA 186
>gi|338737774|ref|YP_004674736.1| 50S ribosomal protein L25 [Hyphomicrobium sp. MC1]
gi|337758337|emb|CCB64162.1| 50S ribosomal protein L25 [Hyphomicrobium sp. MC1]
Length = 237
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G + + R+ G VP++++ G H I+++ N++ K V R
Sbjct: 6 TLKATARPRAGKGAARQARRNGNVPAVIY----GNHE-TPETINLEYNELWKQVL---RG 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F S +++V K VL R V + D PL+V F R + ++++ +P+
Sbjct: 58 HFTSTAIEIDVEGT--------KHIVLARDVQVDPVRDTPLHVDFQRVGKDGVIRVSIPV 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F + +SPGL++GG LN ++ V+ CP D +P +++L +++ + I +++
Sbjct: 110 HFTNETLSPGLKRGGVLNIVRHDVEVFCPYDKIPRAFEINLEGMEIGRSIHISAVEMPEG 169
Query: 233 LK-LLRSKDEPVCKIAGGRASDQK 255
+ +++++D + IAG D +
Sbjct: 170 VSPVIKNRDFTIATIAGALKGDDE 193
>gi|326387510|ref|ZP_08209118.1| 50S ribosomal protein L25/general stress protein Ctc
[Novosphingobium nitrogenifigens DSM 19370]
gi|326208014|gb|EGD58823.1| 50S ribosomal protein L25/general stress protein Ctc
[Novosphingobium nitrogenifigens DSM 19370]
Length = 202
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 16/166 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ GR P++++ G N+ +++ + + L LG F + + +L V
Sbjct: 24 RREGRTPAVIY-------GDNQEPVAIHVEE-KALARALGTGHFFNSIVELTVGGTV--- 72
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
VR LP+ V H TD P + FLR + + + VP+VF ++ SPGL+KGG LN
Sbjct: 73 -----VRTLPKDVAFHPVTDRPEHADFLRLAADHAVHVKVPVVFINEEASPGLKKGGVLN 127
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
+ ++ + D +P I VD++ L+V I D+ + +K++
Sbjct: 128 IVAHELELIATPDSIPDDITVDVTGLEVGASIHLKDIAIPAGVKVV 173
>gi|410945051|ref|ZP_11376792.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconobacter
frateurii NBRC 101659]
Length = 219
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+AG VP++++ G K+ S+ R ++ L R + SR+++L
Sbjct: 24 RRAGLVPAVIY--------GGKQEPSIIALDPRVIMKELHRGGWSSRVYNLAAEGA---- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
E V L R V LH +DAP++V F R + ++V +VF G++ +PG+++GG LN
Sbjct: 72 ---EPVAALIRDVQLHPVSDAPIHVDFQRVSAGTKVHVEVSIVFTGEEKAPGIKRGGVLN 128
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGR 250
++ V +P + DLS LD+ + DLK + L GG+
Sbjct: 129 VVRHYVDVAADPANIPEHFTADLSALDIHDSVRWADLKGTEGVSL-----------TGGQ 177
Query: 251 ASD 253
A+D
Sbjct: 178 ATD 180
>gi|296532495|ref|ZP_06895212.1| 50S ribosomal protein L25 [Roseomonas cervicalis ATCC 49957]
gi|296267179|gb|EFH13087.1| 50S ribosomal protein L25 [Roseomonas cervicalis ATCC 49957]
Length = 214
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 15/161 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R G + RK GRVP++++ G K+ + + R ++ + +
Sbjct: 7 IEAEARERAGKGAARATRKDGRVPAVIY--------GAKQEAVLLSLDPRDVMKEMHKGG 58
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
+ S L+++ V E VR L R+V H D+PL+V F R P ++++ VP+V
Sbjct: 59 WQSHLYEVAVAG-------AEPVRCLMREVQFHPVKDSPLHVDFQRLAPGQMIRVKVPVV 111
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
F+ ++ +PG+++GG LN ++R ++ L D VP ++DL
Sbjct: 112 FQNEESAPGIKEGGVLNVVRRELEVLSDPDQVPEQFEIDLG 152
>gi|453328665|dbj|GAC89093.1| 50S ribosomal protein L25 [Gluconobacter thailandicus NBRC 3255]
Length = 215
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 15/158 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+AG VP++++ G K+ S+ R ++ L R + SR+++L
Sbjct: 21 RRAGLVPAVIY--------GGKQEPSIIALDPRVIMKELHRGGWSSRVYNLAAEGA---- 68
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
E V L R V LH +DAP++V F R + ++V +VF G++ +PG+++GG LN
Sbjct: 69 ---EPVAALIRDVQLHPVSDAPIHVDFQRVSAGTKVHVEVSIVFTGEEKAPGIKRGGVLN 125
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
++ V +P + DLS LD+ + DLK
Sbjct: 126 VVRHYVDVAADPANIPEHFTADLSALDIHDSVRWADLK 163
>gi|381201652|ref|ZP_09908777.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingobium
yanoikuyae XLDN2-5]
gi|427407627|ref|ZP_18897829.1| 50S ribosomal protein L25 [Sphingobium yanoikuyae ATCC 51230]
gi|425714131|gb|EKU77142.1| 50S ribosomal protein L25 [Sphingobium yanoikuyae ATCC 51230]
Length = 203
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G S R+ GRVP++++ G N+ +S+ + + L LG
Sbjct: 6 TLSAEARDRAGKGASRALRREGRVPAVIY-------GMNEEPLSIHVEE-KLLNKQLGTG 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F + + +EV + VR L + V H TD PL+ FLR A + + VP+
Sbjct: 58 HFFNSVIMVEVGGK--------TVRTLAKDVAFHPVTDRPLHADFLRVSEHATVTVAVPV 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
F +D SPGL+KGG LN ++ V+ + A +P + VDL +V I
Sbjct: 110 RFENEDASPGLKKGGVLNVVRHDVELVVDAAEIPDDVVVDLKGFEVGDSI 159
>gi|381168556|ref|ZP_09877750.1| 50S ribosomal protein L25 [Phaeospirillum molischianum DSM 120]
gi|380682416|emb|CCG42568.1| 50S ribosomal protein L25 [Phaeospirillum molischianum DSM 120]
Length = 206
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
+I+A PR G + R+ G+VP +V+ G + + +Q + R L L +
Sbjct: 6 SIVAEPRDRSGKGAARAVRRTGKVPGVVY-------GEKQAAVLIQLDP-RVLWAQLNKP 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F ++LFD++ G+G + R L R V H TD P++V FLR + + + VP+
Sbjct: 58 GFFTQLFDID----LGNG---SRERALARDVQFHPVTDQPVHVDFLRVSADHAIHVKVPV 110
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
+ SPG++KGG +N ++ +C D +P + +D+S L++ + D+ +
Sbjct: 111 HVANELSSPGVKKGGVVNIELHEIELVCSPDAIPHGLTIDISALEIGHSVHLKDIALPAG 170
Query: 233 LK 234
+K
Sbjct: 171 VK 172
>gi|67458744|ref|YP_246368.1| 50S ribosomal protein L25 [Rickettsia felis URRWXCal2]
gi|75536799|sp|Q4UMK5.1|RL25_RICFE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|67004277|gb|AAY61203.1| 50S ribosomal protein L25 [Rickettsia felis URRWXCal2]
Length = 203
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT S R+ GRVP+I++ G K +S+ + +++ + + F+
Sbjct: 9 AKSRTEFGTGASRALRREGRVPAIIY-------GAGKTPVSISLEE-KEITKYYRKPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S+L +L + + K +VLP+ V LH TD +V F+ E K++VP+V+
Sbjct: 61 SQLINLTIDKK--------KYKVLPKAVELHPVTDIVRHVDFVFLE-EKTQKMEVPVVYE 111
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G + + G+++GGY N +KR V LC + +P + +D++ + + + + +++
Sbjct: 112 GKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSF 171
Query: 236 LRSKDEPVCKIAGGRAS 252
K+ + I G R +
Sbjct: 172 TTKKEFVLATIIGRRGA 188
>gi|108709803|gb|ABF97598.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 containing
protein, expressed [Oryza sativa Japonica Group]
Length = 182
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 50 YDETILAIPRASPGTRVSVKERKAGRVPSIVFEQED---GQHGGNKRLISVQTNQIRKLV 106
Y TI A+PR + G R + +ER++GRVP+++ G+ +++L++ Q+ +++
Sbjct: 34 YHHTIQALPRETAGPRAAARERRSGRVPAVLLALAGAGPGEGVAHRKLLTADRKQLGEIL 93
Query: 107 GHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALL 166
+F+S L+VR+ S ++ VLP KVH T LN+ + A +L
Sbjct: 94 KQ--SPYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDETTGNILNLVLVEADEGTML 151
Query: 167 KIDVPLVFRGDDVSPGLRK 185
K+++P+ F+G+DV PGL+K
Sbjct: 152 KVNLPVEFKGEDVCPGLKK 170
>gi|421597665|ref|ZP_16041236.1| 50S ribosomal protein L25/general stress protein Ctc
[Bradyrhizobium sp. CCGE-LA001]
gi|404270227|gb|EJZ34336.1| 50S ribosomal protein L25/general stress protein Ctc
[Bradyrhizobium sp. CCGE-LA001]
Length = 239
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 24/185 (12%)
Query: 76 VPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDL 132
VP +++ GN + IS++ ++R+ + GR F++ L D+E+ +
Sbjct: 30 VPGVIY--------GNNQPPVTISIEDRELRQRI-LAGR--FLTTLVDIELEGK------ 72
Query: 133 IEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTI 192
K RV+PR HL D P++V F+R A ++I VPL + SPG+++GG +N +
Sbjct: 73 --KHRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKAETSPGVKRGGTVNIV 130
Query: 193 KRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA--GGR 250
++ C + +P YI+ D+ L++ + D+K+ +K L +D + I G
Sbjct: 131 AHAIELECGVESIPQYIEADVGSLEIGHSLHLADVKLPAGVKALTREDATLVTIVPPSGY 190
Query: 251 ASDQK 255
A +QK
Sbjct: 191 AEEQK 195
>gi|159487761|ref|XP_001701891.1| predicted protein [Chlamydomonas reinhardtii]
gi|158281110|gb|EDP06866.1| predicted protein [Chlamydomonas reinhardtii]
Length = 373
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 49/227 (21%)
Query: 58 PRASPGTRVSVKERKAGRVPSIVF--------------EQED---------GQHGGNKRL 94
PR++ G R+AGRVP V ED + NK L
Sbjct: 128 PRSATGGTACKWLRRAGRVPGRVHSLPGADARAGAAAGHSEDQGASSSSSNINNNNNKLL 187
Query: 95 ISVQTNQIRKLVGHLGRSFFVSRLFDLEV---------------------RSEFG----- 128
+ + KL+ GR+ +R+ L + RS G
Sbjct: 188 VHFSEGDVAKLIRTFGRNGCTARVLQLNLVAPDAAASDSGAEQAAQADAGRSGEGTSGST 247
Query: 129 SGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGY 188
SG + +RV P +V +++ T + + PPE + +DVP+ DD++PG++KGG+
Sbjct: 248 SGTQLGMLRVKPTRVFVNAVTQRVEGLDLIYCPPERQVLVDVPVRLLNDDLAPGVKKGGW 307
Query: 189 LNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
+ KRTV++ +PPYI+V++ +D++Q +L D+ + P KL
Sbjct: 308 IALFKRTVRYKALGGAIPPYIEVNVRNMDLDQDMLVRDMPIPPGTKL 354
>gi|157825998|ref|YP_001493718.1| 50S ribosomal protein L25 [Rickettsia akari str. Hartford]
gi|166223712|sp|A8GP85.1|RL25_RICAH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|157799956|gb|ABV75210.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
akari str. Hartford]
Length = 199
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 100/199 (50%), Gaps = 21/199 (10%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A PR GT + R+ GRVP+I++ G K +S+ + + + + + F+
Sbjct: 9 AKPRTEFGTGAARALRREGRVPAIIY-------GAGKTPVSISLEE-KAITKYYRKPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNV--TFLRAPPEALLKIDVPLV 173
S+L ++ + + + +VLP+ V LH TD +V FL A + K++VP+V
Sbjct: 61 SQLINVTIDQK--------QYKVLPKAVELHPVTDMVRHVDFVFLEAKTQ---KMEVPIV 109
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
+ G + + G+++GGY N +KR V LC + +P + +D++ + + + + +++
Sbjct: 110 YEGKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGC 169
Query: 234 KLLRSKDEPVCKIAGGRAS 252
+ K+ + I G R +
Sbjct: 170 SFVTKKEFVLATIIGRRGA 188
>gi|91762774|ref|ZP_01264739.1| ribosomal 5S rRNA E-loop binding protein [Candidatus Pelagibacter
ubique HTCC1002]
gi|91718576|gb|EAS85226.1| ribosomal 5S rRNA E-loop binding protein [Candidatus Pelagibacter
ubique HTCC1002]
Length = 228
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 84/163 (51%), Gaps = 16/163 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R AG +P I++ D + ++V ++ L+ + F+S + L + +
Sbjct: 21 RSAGNIPGIIYGGPD-----QNQKVTVLKKTLKSLID---KGSFLSNIITLNLDGK---- 68
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
VLPR++ + +D P ++ FLR P ++I+VP+VF + SPGL++GG LN
Sbjct: 69 ----PQNVLPREITYNVISDEPTHIDFLRVVPGVKIRIEVPVVFINHETSPGLKRGGVLN 124
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
++R ++ CP++ +P I +DL +D+ + +K+ +
Sbjct: 125 IVRRKIELKCPSEKIPSAITIDLGGVDIGESFKISSVKLEEGV 167
>gi|406989085|gb|EKE08901.1| hypothetical protein ACD_16C00237G0002 [uncultured bacterium]
Length = 222
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 26/180 (14%)
Query: 60 ASPGTRVSVKE----------RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHL 109
A+P V V+E R+ G VP++++ GG + N I +L L
Sbjct: 3 ATPQLEVQVREKIGRGAARALRREGCVPAVLY-------GGKDAPVHFSLNPI-QLNKEL 54
Query: 110 GRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
++ F+S++F++ + + R L R V H TD PL+V F R + +
Sbjct: 55 HKTGFLSKIFEISLNGK--------TERALARFVQFHPVTDLPLHVDFFRVTKGEKIAVS 106
Query: 170 VPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
VP+ F + SPGL++GG LN I ++ + D +P +I++DL+ L++ + DLK+
Sbjct: 107 VPIHFINEAASPGLKRGGVLNVIVHNLEVIADVDHIPTHIEIDLTGLEIHDTVHLKDLKL 166
>gi|258541469|ref|YP_003186902.1| 50S ribosomal protein L25/general stress protein Ctc [Acetobacter
pasteurianus IFO 3283-01]
gi|384041390|ref|YP_005480134.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-12]
gi|384049905|ref|YP_005476968.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-03]
gi|384053015|ref|YP_005486109.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-07]
gi|384056247|ref|YP_005488914.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-22]
gi|384058888|ref|YP_005498016.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-26]
gi|384062182|ref|YP_005482824.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-32]
gi|384118258|ref|YP_005500882.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO
3283-01-42C]
gi|421850152|ref|ZP_16283119.1| LSU ribosomal protein L25P [Acetobacter pasteurianus NBRC 101655]
gi|421853284|ref|ZP_16285961.1| LSU ribosomal protein L25P [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|256632547|dbj|BAH98522.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-01]
gi|256635604|dbj|BAI01573.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-03]
gi|256638659|dbj|BAI04621.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-07]
gi|256641713|dbj|BAI07668.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-22]
gi|256644768|dbj|BAI10716.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-26]
gi|256647823|dbj|BAI13764.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-32]
gi|256650876|dbj|BAI16810.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256653867|dbj|BAI19794.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-12]
gi|371459053|dbj|GAB28322.1| LSU ribosomal protein L25P [Acetobacter pasteurianus NBRC 101655]
gi|371478502|dbj|GAB31164.1| LSU ribosomal protein L25P [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 204
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 87/160 (54%), Gaps = 20/160 (12%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFG 128
R+AG VP +++ GG + LI++ R +V + S + SR+++++V +
Sbjct: 24 RRAGLVPGVIY-------GGKQEPTLIAIDP---RIIVKGIQTSGWRSRVYEIKVDGK-- 71
Query: 129 SGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGY 188
R L R V LH D+P++V FLR + + ++V + F ++ PG+++GG
Sbjct: 72 ------AERALVRDVQLHPVKDSPVHVDFLRLAAGSRVHVEVSVHFENEETCPGIKRGGV 125
Query: 189 LNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
LN ++ T++ PAD +P + VDLS+LD+ + D++
Sbjct: 126 LNVVRHTIEVDVPADNIPEFFTVDLSKLDIADNVRWEDVQ 165
>gi|383501477|ref|YP_005414836.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
australis str. Cutlack]
gi|378932488|gb|AFC70993.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
australis str. Cutlack]
Length = 203
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 101/199 (50%), Gaps = 21/199 (10%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A PR GT + R+ GRVP+I++ G K +S+ + +++ + + F+
Sbjct: 9 AKPRTEFGTGAARALRREGRVPAIIY-------GAGKTPVSISLKE-KEITKYYRKPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNV--TFLRAPPEALLKIDVPLV 173
S+L ++ + + + +VLP+ V LH TD +V FL A + K++VP+V
Sbjct: 61 SQLINVTIDKK--------QYKVLPKAVELHPVTDIVRHVDFVFLEAKTQ---KMEVPVV 109
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
+ G + + G+++GGY N +KR V LC + +P + +D++ + + + + +++
Sbjct: 110 YEGKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGC 169
Query: 234 KLLRSKDEPVCKIAGGRAS 252
+ K+ + I G R +
Sbjct: 170 SFVTKKEFVLATIIGRRGA 188
>gi|71082803|ref|YP_265522.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus
Pelagibacter ubique HTCC1062]
gi|109893377|sp|Q4FPH0.1|RL25_PELUB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71061916|gb|AAZ20919.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus
Pelagibacter ubique HTCC1062]
Length = 228
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 84/163 (51%), Gaps = 16/163 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R AG +P I++ D + ++V ++ L+ + F+S + L + +
Sbjct: 21 RSAGNIPGIIYGGPD-----QNQKVTVLKKTLKSLID---KGSFLSNIITLNLDGK---- 68
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
VLPR++ + +D P ++ FLR P ++I+VP+VF + SPGL++GG LN
Sbjct: 69 ----PQNVLPREITYNVISDEPTHIDFLRVVPGVKIRIEVPVVFINHETSPGLKRGGVLN 124
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
++R ++ CP++ +P I +DL +D+ + +K+ +
Sbjct: 125 IVRRKIELKCPSEKIPSAITIDLDGVDIGESFKISSVKLEEGV 167
>gi|239948215|ref|ZP_04699968.1| ribosomal protein L25, Ctc-form [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239922491|gb|EER22515.1| ribosomal protein L25, Ctc-form [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 203
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 99/197 (50%), Gaps = 17/197 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT + R+ GRVP+I++ G K +S+ + +++ + + F+
Sbjct: 9 AKSRVEFGTGAARALRREGRVPAIIY-------GAGKTSVSISLEE-KEITKYYRKPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S+L +L + + K +VLP+ V LH TD +V F+ E K++VP+V+
Sbjct: 61 SQLINLTIDKK--------KYKVLPKAVELHPVTDIVRHVDFIFLE-EKTQKMEVPVVYE 111
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G + + G+++GGY N +KR V LC + +P + +D++ + + + + +++
Sbjct: 112 GKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSLKIELPKGCSF 171
Query: 236 LRSKDEPVCKIAGGRAS 252
+ K+ + I G R +
Sbjct: 172 VTKKEFVLATIIGRRGA 188
>gi|85716025|ref|ZP_01047002.1| Ribosomal protein L25 [Nitrobacter sp. Nb-311A]
gi|85697223|gb|EAQ35104.1| Ribosomal protein L25 [Nitrobacter sp. Nb-311A]
Length = 233
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 93/174 (53%), Gaps = 22/174 (12%)
Query: 76 VPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDL 132
VP++++ GNK+ ISV+ ++R+ + GR F++ +FD+ + +
Sbjct: 29 VPAVIY--------GNKQPPQPISVEGAELRQRI-LAGR--FLTTIFDINLDGK------ 71
Query: 133 IEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTI 192
K RV+PR HL D P++V F+R A +++ VPL DV+PG+++GG +N +
Sbjct: 72 --KHRVIPRDFHLDPVKDFPIHVDFMRLGEGAAIRVSVPLRLLKADVAPGVKRGGTVNLV 129
Query: 193 KRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
+ C A+ +P +I+ D+ L++ + D+++ P +K L +D + I
Sbjct: 130 THAIDIECAAENIPQFIEADVGALEINHSLHLSDVELPPGVKTLAREDVTLVTI 183
>gi|75676696|ref|YP_319117.1| 50S ribosomal protein L25 [Nitrobacter winogradskyi Nb-255]
gi|109893373|sp|Q3SPM6.1|RL25_NITWN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|74421566|gb|ABA05765.1| LSU ribosomal protein L25P [Nitrobacter winogradskyi Nb-255]
Length = 228
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 91/168 (54%), Gaps = 22/168 (13%)
Query: 76 VPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDL 132
VP++++ GNK+ ISV+ ++R+ + GR F++ +FD+ + +
Sbjct: 29 VPAVIY--------GNKQPPQPISVEEPELRQRI-LAGR--FLTTIFDINLDGK------ 71
Query: 133 IEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTI 192
K RV+PR HL D P++V F+R A +++ VPL DV+PG+++GG +N +
Sbjct: 72 --KHRVIPRDFHLDPVKDFPIHVDFMRLGEGATIRVSVPLRLLKADVAPGVKRGGTVNLV 129
Query: 193 KRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKD 240
+ C A+ +P +I+ D+ L++ + DL++ P +K L +D
Sbjct: 130 THAIDVECAAESIPQFIEADVGALEISHSLHLSDLQLPPGVKPLARED 177
>gi|456357714|dbj|BAM92159.1| 50S ribosomal protein L25 [Agromonas oligotrophica S58]
Length = 235
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 83/152 (54%), Gaps = 11/152 (7%)
Query: 95 ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLN 154
ISV+ ++R+ + GR F++ +FD+ + + K RV+PR HL D P++
Sbjct: 43 ISVEDRELRQRI-LAGR--FLTTIFDVSLDGK--------KHRVIPRDFHLDPVKDFPIH 91
Query: 155 VTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
V F+R A +++ VPL G + +PG+++GG +N + T+ C A+ +P +I+ D+S
Sbjct: 92 VDFMRLGQGATIRVSVPLHVVGSEAAPGVKRGGTVNIVTHTLDLECLAENIPQFIEADVS 151
Query: 215 ELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
L++ + D+K+ +K L D + I
Sbjct: 152 ALEINHSLHISDVKLPTGVKTLSRDDATLVTI 183
>gi|347761434|ref|YP_004868995.1| 50S ribosomal protein L25 [Gluconacetobacter xylinus NBRC 3288]
gi|347580404|dbj|BAK84625.1| LSU ribosomal protein L25P [Gluconacetobacter xylinus NBRC 3288]
Length = 205
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+AG VP +++ G LI++ +R+ L +S + SR++D+ V
Sbjct: 24 RRAGLVPGVIYGA-----GQEPVLIALDPRIVRR---ELHKSGWRSRIYDISVEKGV--- 72
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
V L R+V LH +DAP++V + R + ++V + F G++VSPG+++GG +N
Sbjct: 73 ----SVHALLREVQLHPVSDAPIHVDYQRLAAGHKVHVEVEIRFEGEEVSPGVKRGGVMN 128
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
++ TV + +P + DLS+LD + DLK
Sbjct: 129 IVRHTVDVVVDPANIPEFFTADLSKLDFHDNVRWADLK 166
>gi|329115062|ref|ZP_08243817.1| 50S ribosomal protein L25 [Acetobacter pomorum DM001]
gi|326695505|gb|EGE47191.1| 50S ribosomal protein L25 [Acetobacter pomorum DM001]
Length = 204
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 87/160 (54%), Gaps = 20/160 (12%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFG 128
R+AG VP +++ GG + LI++ R ++ + S + SR+++++V +
Sbjct: 24 RRAGLVPGVIY-------GGKQEPTLIAIDP---RIIIKGIQASGWRSRVYEIKVDGK-- 71
Query: 129 SGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGY 188
R L R V LH D+P++V FLR + + ++V + F ++ PG+++GG
Sbjct: 72 ------AERALVRDVQLHPVKDSPVHVDFLRLAAGSRVHVEVSVHFENEETCPGIKRGGV 125
Query: 189 LNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
LN ++ T++ PAD +P + VDLS+LD+ + D++
Sbjct: 126 LNVVRHTIEVDVPADNIPEFFTVDLSKLDIADNVRWEDVQ 165
>gi|90422926|ref|YP_531296.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodopseudomonas palustris BisB18]
gi|109893388|sp|Q219F9.1|RL25_RHOPB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|90104940|gb|ABD86977.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisB18]
Length = 240
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 88/161 (54%), Gaps = 13/161 (8%)
Query: 88 HGGNK--RLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHL 145
+G NK ISV ++R + GR F++ +FD+E+ + K RV+PR HL
Sbjct: 34 YGDNKPPVTISVDDTELRARI-LAGR--FLTTIFDVELDGQ--------KHRVIPRDFHL 82
Query: 146 HSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIV 205
D P++V FLR AL+++ VPL + + +PG+++GG +N + TV+ A+ +
Sbjct: 83 DPVRDFPIHVDFLRLGEGALIRVSVPLHLKNAEGAPGVKRGGTVNIVTHTVELEAEAESI 142
Query: 206 PPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
P +I+ D+S+LD+ + D+ + +K L +D + I
Sbjct: 143 PQFIEADVSQLDIGSSLHLSDVVLPKGVKTLSREDLTLVTI 183
>gi|402703286|ref|ZP_10851265.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
helvetica C9P9]
Length = 203
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 99/197 (50%), Gaps = 17/197 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT + R+ GRVP+I++ G K +S+ + +++ + + F+
Sbjct: 9 AKSRTEFGTGAARALRREGRVPAIIY-------GAGKTPVSISLEE-KEITKYYRKPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S+L +L + + + +VLP+ V LH TD +V F+ +A K++VP+V+
Sbjct: 61 SQLINLTIDKK--------QYKVLPKAVELHPVTDIVCHVDFVFLEEKAQ-KMEVPVVYE 111
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G + + G+++GGY N +KR V LC + +P + +D++ + + + + +++
Sbjct: 112 GKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSF 171
Query: 236 LRSKDEPVCKIAGGRAS 252
K+ + I G R +
Sbjct: 172 ATKKEFVLATIIGRRGA 188
>gi|315498173|ref|YP_004086977.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Asticcacaulis
excentricus CB 48]
gi|315416185|gb|ADU12826.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Asticcacaulis
excentricus CB 48]
Length = 195
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGRSFFVS 116
R GT + R G+VP I++ GG+K I+V+ N+ RK + +
Sbjct: 11 RERTGTGGARATRNEGKVPGILY-------GGDKAPVAIAVKLNEFRK-------ALYTG 56
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
+L V ++G E +V+ + + H TD P++ R +KI+VP+ F+
Sbjct: 57 KLAGHLVTLKYGE----ETQKVIAKAIDFHPVTDVPVHFDLYRVDETQTIKINVPVHFKN 112
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
+ SPG++KGG L ++ PA +P + VDLS LD+ + GDL + + +
Sbjct: 113 HEASPGIKKGGALTVAFHELEIQVPAGHIPEDVVVDLSGLDIGASVHVGDLSLPSDVTAV 172
Query: 237 RSKDEPVCKIAGGRASDQKKS 257
KD + I A +++
Sbjct: 173 PGKDVVIASITASAAEKSEEA 193
>gi|339022201|ref|ZP_08646162.1| LSU ribosomal protein L25P [Acetobacter tropicalis NBRC 101654]
gi|338750780|dbj|GAA09466.1| LSU ribosomal protein L25P [Acetobacter tropicalis NBRC 101654]
Length = 205
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 19/160 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFG 128
R+AG VP +++ GG K LI++ R ++ + S + SR++ E++ E G
Sbjct: 24 RRAGLVPGVIY-------GGKKEPALIALDP---RIVIKGIQASGWRSRVY--EIKIEGG 71
Query: 129 SGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGY 188
+ + R L R + LH D P +V F+R + ++V + F G++ SPG+++GG
Sbjct: 72 ATE-----RALIRDIQLHPVKDTPEHVDFMRLAAGQRVTVEVSVHFSGEEKSPGIKRGGV 126
Query: 189 LNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
LN ++ TV+ A+ +P + VDLS LD+ + DLK
Sbjct: 127 LNIVRHTVEVEADAEHIPEFFSVDLSTLDINDNVRWEDLK 166
>gi|148253296|ref|YP_001237881.1| 50S ribosomal protein L25 [Bradyrhizobium sp. BTAi1]
gi|146405469|gb|ABQ33975.1| LSU ribosomal protein L25P [Bradyrhizobium sp. BTAi1]
Length = 201
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 84/153 (54%), Gaps = 11/153 (7%)
Query: 95 ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLN 154
ISV+ ++R+ + GR F++ +FD+ + + K RV+PR HL D P++
Sbjct: 12 ISVEDRELRQRI-LAGR--FLTTIFDISLDGK--------KHRVIPRDFHLDPVKDFPIH 60
Query: 155 VTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
V F+R A +++ VPL G + +PG+++GG +N + T+ C A+ +P +I+ D+S
Sbjct: 61 VDFMRLGQGATIRVSVPLHVVGSEGAPGVKRGGTVNIVTHTLDLECLAENIPQFIEADVS 120
Query: 215 ELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA 247
L++ + D+K+ +K L +D + I
Sbjct: 121 ALEINHSLHISDVKLPTGVKTLSREDATLVTIV 153
>gi|300024018|ref|YP_003756629.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Hyphomicrobium denitrificans ATCC 51888]
gi|299525839|gb|ADJ24308.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Hyphomicrobium denitrificans ATCC 51888]
Length = 242
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 99/197 (50%), Gaps = 17/197 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G + + R+ G VP++++ ++ I+++ N++ K V R
Sbjct: 6 TLKATARPRAGKGAARQARRDGNVPAVIYGNQE-----TPETINLEYNELWKQVL---RG 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F S +L+V K VL R V + D PL+V F R + ++++ +P+
Sbjct: 58 HFTSTAIELDVEGT--------KHIVLARDVQVDPIRDTPLHVDFQRVGKDGVIRVSIPM 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F + +SPGL++GG LN ++ V+ P D +P + +++L L++ + I + +
Sbjct: 110 HFVNETLSPGLKRGGVLNIVRHDVEVFAPYDKIPRFFEINLEGLEIGRSIHISAVNMPEG 169
Query: 233 LK-LLRSKDEPVCKIAG 248
+ +++++D + IAG
Sbjct: 170 VTPVIKNRDFTIATIAG 186
>gi|27382552|ref|NP_774081.1| 50S ribosomal protein L25 [Bradyrhizobium japonicum USDA 110]
gi|71153127|sp|Q89DJ8.1|RL25_BRAJA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|27355724|dbj|BAC52706.1| 50S ribosomal protein L25 [Bradyrhizobium japonicum USDA 110]
Length = 238
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 24/185 (12%)
Query: 76 VPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDL 132
VP +++ GN + IS++ ++R+ + GR F++ L D+++ +
Sbjct: 30 VPGVIY--------GNNQPPVTISIEDRELRQRI-LAGR--FLTTLVDIDLEGK------ 72
Query: 133 IEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTI 192
K RV+PR HL D P++V F+R A ++I VPL + SPG+++GG +N +
Sbjct: 73 --KHRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKSEASPGVKRGGTVNIV 130
Query: 193 KRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA--GGR 250
++ C + +P YI+ D+ L++ + D+K+ +K L +D + I G
Sbjct: 131 AHAIELECGVESIPQYIEADVGSLEIGHSLHLSDVKLPAGVKALTREDATLVTIVPPSGY 190
Query: 251 ASDQK 255
A +QK
Sbjct: 191 AEEQK 195
>gi|83313447|ref|YP_423711.1| ribosomal protein L25 [Magnetospirillum magneticum AMB-1]
gi|109893368|sp|Q2VZ23.1|RL25_MAGMM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|82948288|dbj|BAE53152.1| Ribosomal protein L25 [Magnetospirillum magneticum AMB-1]
Length = 202
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 15/177 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
I A R G + R+AG+VP +++ G K I +Q + R + + ++
Sbjct: 6 AIAAELRDGSGKGAARATRRAGKVPGVIY-------GDKKAAICIQMDP-RVVWAQISKT 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F ++LF++++ + K L R V +H TD P++V F+R + + + VP+
Sbjct: 58 GFFTQLFNVDLGKD-------GKHLCLARDVQMHPVTDQPIHVDFMRVSADHAIHVKVPV 110
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F + SPG++KGG LN ++ C + +P I +DL L++ I DLK+
Sbjct: 111 HFTNELKSPGIKKGGVLNVELHEIEITCSPNDIPHEILIDLDGLEIGASIHLSDLKL 167
>gi|365859122|ref|ZP_09399000.1| ribosomal protein L25, Ctc-form [Acetobacteraceae bacterium
AT-5844]
gi|363713021|gb|EHL96680.1| ribosomal protein L25, Ctc-form [Acetobacteraceae bacterium
AT-5844]
Length = 215
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R G + R+ G VP++++ G K ++ R ++ + +
Sbjct: 7 IEAEARELAGKGAARATRRQGLVPAVIY--------GAKEEATLIALDPRDVMKEMHKGG 58
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
+ S L+++ ++ G+ VR L R V H D PL+V F R P L+++ VPLV
Sbjct: 59 WQSHLYEVAIKG--GA-----TVRTLMRDVQFHPLKDTPLHVDFQRLAPGQLIRVKVPLV 111
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
F + +PG+++GG +N + R ++ L D VP + ++DL++ + D+K
Sbjct: 112 FLNEATNPGVKEGGVINAVYRELEVLSDPDQVPEHFEIDLADFGIGHSFHWDDVKDKAGA 171
Query: 234 KLLRSKDEPVCKIA 247
K +++ + V IA
Sbjct: 172 KPVQAGNFVVASIA 185
>gi|114769270|ref|ZP_01446896.1| Ribosomal protein L25 [Rhodobacterales bacterium HTCC2255]
gi|114550187|gb|EAU53068.1| Ribosomal protein L25 [Rhodobacterales bacterium HTCC2255]
Length = 221
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 15/172 (8%)
Query: 58 PRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSR 117
PRA G + + R+ G VP +V+ G + I++ N + K L F+S
Sbjct: 12 PRAGTGKGAARQARRDGLVPGVVY-----GGGEEPQAITIPFNILFK---KLKDGGFMST 63
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
LF+L+V GS D VR + R V H D P ++ FLR ++ + +++P+ F +
Sbjct: 64 LFNLKVE---GSDD----VRAVCRGVQRHVVKDLPTHIDFLRLKRDSRINMNIPVHFLNE 116
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+ S GL+KGG L ++ V+ + A +P YI+ DL L++ + I D+ +
Sbjct: 117 ETSAGLKKGGTLTIVRAEVELMVTAGNIPDYIEADLENLEIGETINISDITL 168
>gi|254470593|ref|ZP_05083997.1| ribosomal protein L25, Ctc-form [Pseudovibrio sp. JE062]
gi|374332778|ref|YP_005082962.1| 50S ribosomal protein L25 [Pseudovibrio sp. FO-BEG1]
gi|211960904|gb|EEA96100.1| ribosomal protein L25, Ctc-form [Pseudovibrio sp. JE062]
gi|359345566|gb|AEV38940.1| 50S ribosomal protein L25 [Pseudovibrio sp. FO-BEG1]
Length = 204
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 77/145 (53%), Gaps = 16/145 (11%)
Query: 74 GRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLI 133
G VP++++ G K +S+ +++ L + F+S + +++ E
Sbjct: 27 GLVPAVIY-------GDKKEAVSINL-PLKEATMTLHKGGFLSHVGTIDLNGE------- 71
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
K V+ + LH D ++V FLR +A L +++P+ F ++ SPGL++GG LN ++
Sbjct: 72 -KTSVIAKDFQLHPVKDTLMHVDFLRVSADATLTVEIPVKFLNEETSPGLKRGGVLNVVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDV 218
TV+ PA +P I+VDL+E D+
Sbjct: 131 HTVEMTVPATAIPEAIEVDLAEADL 155
>gi|86751268|ref|YP_487764.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodopseudomonas palustris HaA2]
gi|109893387|sp|Q2ISF7.1|RL25_RHOP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|86574296|gb|ABD08853.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris HaA2]
Length = 240
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 11/153 (7%)
Query: 95 ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLN 154
ISV+ +R + GR F++ +FD+ + + K RV+PR HL D P++
Sbjct: 43 ISVEDKDLRLRI-QAGR--FLTTIFDVVLDGQ--------KHRVIPRDYHLDPVKDFPVH 91
Query: 155 VTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
V FLR A ++I VPL +G + +PG+++GG N + TV PAD +P +I+ D+S
Sbjct: 92 VDFLRLGEGATIRISVPLHLKGLESAPGVKRGGTFNIVTHTVDLEAPADAIPQFIEADVS 151
Query: 215 ELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA 247
LD+ + D+ + +K + +D + I
Sbjct: 152 TLDIGVSLHLSDIALPKGVKSVSREDVTLVTIV 184
>gi|51473784|ref|YP_067541.1| 50S ribosomal protein L25 [Rickettsia typhi str. Wilmington]
gi|383752560|ref|YP_005427660.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
typhi str. TH1527]
gi|383843395|ref|YP_005423898.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
typhi str. B9991CWPP]
gi|71153659|sp|Q68WD3.1|RL25_RICTY RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|51460096|gb|AAU04059.1| 50S ribosomal protein L25 [Rickettsia typhi str. Wilmington]
gi|380759203|gb|AFE54438.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
typhi str. TH1527]
gi|380760042|gb|AFE55276.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
typhi str. B9991CWPP]
Length = 203
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 21/195 (10%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT + R+ GRVP+I++ G K IS+ + +++ + R F+
Sbjct: 9 AKSRTEFGTGAARALRREGRVPAIIY-------GAGKIPISISLEE-KEITKYYRRPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNV--TFLRAPPEALLKIDVPLV 173
S+L +L + + + +VLP+ V LH TD +V FL A + K++VP+V
Sbjct: 61 SQLINLTIDKK--------QYKVLPKAVELHPVTDIVRHVDFVFLEAKTQ---KMEVPVV 109
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
+ G + + G+++GGY N IKR V LC + +P + +D++ + + + + ++K+
Sbjct: 110 YEGKERALGVKRGGYFNIIKRRVILLCDINNIPRNVTIDVTNMPIGTSLKSSEVKLPIGC 169
Query: 234 KLLRSKDEPVCKIAG 248
+ K+ + I G
Sbjct: 170 SFVTKKEFVLATIIG 184
>gi|341615434|ref|ZP_08702303.1| 50S ribosomal protein L25/general stress protein Ctc
[Citromicrobium sp. JLT1363]
Length = 226
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G S R+ GRVP++++ GG + I++ + R+L+ L
Sbjct: 6 TLPAETRDRAGKGASRALRREGRVPAVIY-------GGKEEPITIHVEE-RELIRQLDMG 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F++ + ++EV + KVR LP+ V LH TD P +V FLR A + + VP+
Sbjct: 58 HFMNSIIEIEVGGK--------KVRTLPKDVALHPVTDRPEHVDFLRLAKGAKVDVSVPV 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYI 209
VF ++ SPGL+KGG LN ++ ++ +C AD +P I
Sbjct: 110 VFVDEEESPGLKKGGVLNVVRHELELVCEADKIPNEI 146
>gi|347757711|ref|YP_004865273.1| 50S ribosomal protein L25 [Micavibrio aeruginosavorus ARL-13]
gi|347590229|gb|AEP09271.1| ribosomal protein L25, Ctc-form [Micavibrio aeruginosavorus ARL-13]
Length = 212
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
++ A R G ++ R+ ++P++V+ G +K +S+ T ++++ +
Sbjct: 6 SLTAEKRDGAGKGIARALRRENKIPAVVY-------GDSKEPVSI-TLPLKEVTLEYRKG 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ + L +++V + K L R V LH TD ++V FLR P+ +K+DVP+
Sbjct: 58 YMFTHLCEIDVAGQ--------KHLTLARDVQLHPVTDKIIHVDFLRVTPKTRIKVDVPV 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F D+ GL+ GG LN + V C A +P +++VDL+ D+ I +K+
Sbjct: 110 HFINDEECKGLKAGGVLNVVHHEVVLECAATDIPEFVEVDLTNYDLGDVIHMDVVKLPKG 169
Query: 233 LKLLRSKDEPVCKIAGGRA 251
+ DE + IA RA
Sbjct: 170 ATSVLEGDETIATIAVPRA 188
>gi|418054349|ref|ZP_12692405.1| 50S ribosomal protein L25 [Hyphomicrobium denitrificans 1NES1]
gi|353211974|gb|EHB77374.1| 50S ribosomal protein L25 [Hyphomicrobium denitrificans 1NES1]
Length = 243
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 103/201 (51%), Gaps = 19/201 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A PRA G + + R+ G VP++++ G H I+++ N++ K V R F
Sbjct: 11 ARPRAGKGA--ARQARRDGNVPAVIY----GNHE-TPETINLEYNELWKQVL---RGHFT 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S +L+V + K VL R V + D PL+V F R + ++++ +P+ F
Sbjct: 61 STAIELDVEGK--------KHIVLARDVQVDPIRDTPLHVDFQRVGKDGMIRVSIPVHFV 112
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK- 234
+ +SPGL++GG LN ++ V+ L P D +P + +V L L++ + I + + +
Sbjct: 113 HEALSPGLKRGGVLNIVRHDVEVLAPYDKLPRFFEVSLEGLEIGRSIHISAVHLPEGVTP 172
Query: 235 LLRSKDEPVCKIAGGRASDQK 255
+++++D + IAG +++
Sbjct: 173 VIKNRDFTIATIAGALKGEEE 193
>gi|407780097|ref|ZP_11127344.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor pacificus pht-3B]
gi|407298095|gb|EKF17240.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor pacificus pht-3B]
Length = 216
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G++P++++ G N+ +S+ T +++ + F + + +EV +
Sbjct: 25 RRNGKIPAVIY-------GDNEAPLSI-TLPYKEVFLKIHAGGFKTTIATIEVDGK---- 72
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
K++VLP+ L D ++V FLR ++ ++VP+ F D+ SPG+++GG LN
Sbjct: 73 ----KIKVLPKDYQLDPVRDFLMHVDFLRIGKGTVVTVNVPVHFINDEASPGIKRGGVLN 128
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDV 218
++ V+F CPA +P +I+VDL+ +D+
Sbjct: 129 IVRHDVEFTCPATAIPEFIEVDLTGMDI 156
>gi|357976241|ref|ZP_09140212.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. KC8]
Length = 205
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 86/165 (52%), Gaps = 20/165 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSR 117
RA G +V R+ GRVP++++ GNK+ +S+ + + LV L F++
Sbjct: 14 RAGKGASRAV--RREGRVPAVIY--------GNKQEPLSIHVEE-KALVKALSTGHFMNT 62
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
+ +E + ++R LP+ V H TD P +V FLR + ++VP+VF +
Sbjct: 63 VIMIEANGQ--------QIRTLPKDVQFHPVTDRPQHVDFLRIGEHTTVHVNVPVVFTDE 114
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
+PG+++GG LN ++ ++ + A ++P + + L L+V + I
Sbjct: 115 ADAPGIKRGGVLNIVQHDIELVVDAALIPDEVKISLKGLEVGESI 159
>gi|15604456|ref|NP_220974.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Madrid E]
gi|383487426|ref|YP_005405106.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. GvV257]
gi|383488005|ref|YP_005405684.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Chernikova]
gi|383488850|ref|YP_005406528.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Katsinyian]
gi|383489690|ref|YP_005407367.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Dachau]
gi|383499830|ref|YP_005413191.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. BuV67-CWPP]
gi|383500667|ref|YP_005414027.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. RpGvF24]
gi|386082466|ref|YP_005999043.1| 50S ribosomal protein L25 [Rickettsia prowazekii str. Rp22]
gi|6225985|sp|Q9ZCV3.1|RL25_RICPR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|3861150|emb|CAA15050.1| PROBABLE 50S RIBOSOMAL PROTEIN L25 (rplY) [Rickettsia prowazekii
str. Madrid E]
gi|292572230|gb|ADE30145.1| 50S ribosomal protein L25 [Rickettsia prowazekii str. Rp22]
gi|380757791|gb|AFE53028.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. GvV257]
gi|380758364|gb|AFE53600.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. RpGvF24]
gi|380760884|gb|AFE49406.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Chernikova]
gi|380761729|gb|AFE50250.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Katsinyian]
gi|380762576|gb|AFE51096.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. BuV67-CWPP]
gi|380763413|gb|AFE51932.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Dachau]
Length = 203
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT + R+ GRVP+I++ G K IS+ + +++ + + F+
Sbjct: 9 AKSRTEFGTGAARALRREGRVPAIIY-------GAGKTPISISLKE-KEITKYYRKPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNV--TFLRAPPEALLKIDVPLV 173
S+L +L + + + +VLP+ V LH TD +V FL A + K++VP+V
Sbjct: 61 SQLINLTIDKK--------QYKVLPKAVELHPVTDIVRHVDFVFLEAKTQ---KMEVPIV 109
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
+ G + + G+++GGY N IKR V LC + +P + +D++ + + + + +++
Sbjct: 110 YEGKERALGVKRGGYFNIIKRRVILLCDVNNIPRNVTIDVTNMPIGTSLKSSQVELPKGC 169
Query: 234 KLLRSKDEPVCKIAGGRA 251
+ K+ + I G R
Sbjct: 170 SFITKKEFVLATIIGRRG 187
>gi|146342827|ref|YP_001207875.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 278]
gi|146195633|emb|CAL79660.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 278]
Length = 191
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 75/135 (55%), Gaps = 9/135 (6%)
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F++ +FD+ + + K RV+PR HL D P++V F+R A +++ VPL
Sbjct: 15 FLTTIFDVTLDGK--------KHRVIPRDFHLDPVKDFPIHVDFMRLGQGATIRVSVPLH 66
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
G + SPG+++GG +N + T++ C A+ +P +I+ D+S L++ + D+K+ +
Sbjct: 67 VVGSEGSPGVKRGGTVNIVTHTLELECLAENIPQFIEADVSALEINHSLHVSDVKLPTGV 126
Query: 234 KLL-RSKDEPVCKIA 247
K L R +D + I
Sbjct: 127 KTLSRGEDATLVTIV 141
>gi|402851637|ref|ZP_10899783.1| LSU ribosomal protein L25p [Rhodovulum sp. PH10]
gi|402498099|gb|EJW09865.1| LSU ribosomal protein L25p [Rhodovulum sp. PH10]
Length = 256
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 93/183 (50%), Gaps = 26/183 (14%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQI----RKLVGHLGR 111
A PRA G +V R+ GR+P++++ G N+ IS+ +++ R L G
Sbjct: 33 ARPRAGKGASRAV--RREGRIPAVIY-------GDNQPPISIALDELEVRKRILAGR--- 80
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F++ +FD+ + K RV+PR + D PL+V FLR A +++ VP
Sbjct: 81 --FLTTIFDIVLDG--------TKHRVIPRDYQVEPLRDLPLHVDFLRLGEGATIRVRVP 130
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
+ + +PG+++GG ++ + V CPAD +P I+VDL+ L++ D+ + P
Sbjct: 131 VHTSNPEAAPGIKRGGTVSVVAHAVDLRCPADAIPESIEVDLTGLEINHSRHLSDIPLPP 190
Query: 232 ALK 234
++
Sbjct: 191 NVR 193
>gi|288942090|ref|YP_003444330.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Allochromatium vinosum DSM 180]
gi|288897462|gb|ADC63298.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Allochromatium vinosum DSM 180]
Length = 201
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A PR GT S + R+ G VP+IV+ G H + ++SV N++ K HL F
Sbjct: 9 AQPRTGTGTGASRRLRRTGLVPAIVY----GAHQ-DPEMVSVSHNELLK---HLEHEAFY 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S + DL+V GD + KV + + + H L+V F+R + LK+ VPL F
Sbjct: 61 SHVLDLKV------GDDVTKVVL--KDMQRHPAKPFILHVDFMRVSQDEKLKMVVPLHFL 112
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
+D G++ GG ++ V+ +C +P +I VD++E+++ + +L + + L
Sbjct: 113 NEDTCKGVKLGGVVSHTITEVEIVCLPQDLPEFIGVDMAEMEIGSIVHLSELALPEGVAL 172
Query: 236 LRS--KDEPVCKIAGGR 250
+ DEPV I R
Sbjct: 173 AHAPDPDEPVVVIHSAR 189
>gi|344337615|ref|ZP_08768549.1| 50S ribosomal protein L25 [Thiocapsa marina 5811]
gi|343802568|gb|EGV20508.1| 50S ribosomal protein L25 [Thiocapsa marina 5811]
Length = 204
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 100/201 (49%), Gaps = 22/201 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGR 111
I A PRA GT S + R+ G+VP+IV+ GG++ ++SV N++ K HL
Sbjct: 7 INAQPRALAGTGASRRLRRTGQVPAIVY-------GGHQEPEMVSVGHNELLK---HLEH 56
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + DL++ V+V+ + + H +V FLR + L++ VP
Sbjct: 57 EAFYSHVLDLKIGER--------SVKVVLKDLQRHPAKPFVQHVDFLRITQDEKLRMSVP 108
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
L F ++ S G++ GG ++ ++ +C +P +I VD+ +L++ Q I D+ +
Sbjct: 109 LHFINEERSKGVKMGGQVSHNITELEIVCLPKDLPEFIAVDMGDLEIGQIIHLSDIPMPE 168
Query: 232 ALKLLRS--KDEPVCKIAGGR 250
+ L + DEPV I G R
Sbjct: 169 GVSLAHTPDSDEPVAMIYGPR 189
>gi|296446566|ref|ZP_06888508.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylosinus
trichosporium OB3b]
gi|296255920|gb|EFH03005.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylosinus
trichosporium OB3b]
Length = 227
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 20/183 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLV--GHLGR 111
+ A R+ G + R+ GR+P +++ D +S+ ++ KL+ GH
Sbjct: 7 LAAAVRSGTGKGAARSVRREGRIPGVIYGGGDA-----PTPLSLDQKELTKLIYAGH--- 58
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F++ +F+L++ + R +PR L D PL+V FLR + L+IDVP
Sbjct: 59 --FLTTIFELDIDGK--------TERAIPRDYQLDVVKDTPLHVDFLRLRAGSRLRIDVP 108
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
+ F + SPGL++GG LN + +V+ PAD +P I DL+ L+ + + P
Sbjct: 109 VHFINHEASPGLKRGGSLNVVYHSVEMWVPADNIPDGITGDLTGLEFNDALHISAFTLPP 168
Query: 232 ALK 234
K
Sbjct: 169 NCK 171
>gi|340779043|ref|ZP_08698986.1| 50S ribosomal protein L25/general stress protein Ctc [Acetobacter
aceti NBRC 14818]
Length = 212
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 20/169 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+AG VP++V+ G K S+ R ++ L + + S ++ E +G
Sbjct: 25 RRAGLVPAVVY--------GAKAEASLIALDPRVIMRELHKPGWRSHVY------EIKAG 70
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
DL E R L R + H +DAP++V F R P + +++ + G+D SPG+ +GG LN
Sbjct: 71 DLSE--RALMRDIQFHPVSDAPIHVDFQRLAPGQKVHVEIVVKIEGEDNSPGISRGGVLN 128
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK----VHPALKL 235
++ T++ +P + VD+S LD+ + DLK V P L++
Sbjct: 129 VVRHTIEVTADPSNIPEFFTVDVSALDINDNVRWDDLKGTEGVTPVLQI 177
>gi|91205677|ref|YP_538032.1| 50S ribosomal protein L25 [Rickettsia bellii RML369-C]
gi|157826865|ref|YP_001495929.1| 50S ribosomal protein L25 [Rickettsia bellii OSU 85-389]
gi|109893391|sp|Q1RI71.1|RL25_RICBR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166223713|sp|A8GVL5.1|RL25_RICB8 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91069221|gb|ABE04943.1| 50S ribosomal protein L25 [Rickettsia bellii RML369-C]
gi|157802169|gb|ABV78892.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
bellii OSU 85-389]
Length = 202
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 97/197 (49%), Gaps = 17/197 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT + R+ GRVP+I++ G K +S+ + +++ + + F+
Sbjct: 9 AKSRNEFGTGAARALRREGRVPAIIY-------GAKKTPVSISLEE-KEITKYYRKPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S+L +L + + +VLP+ V LH TD +V F+ + K++VP+V+
Sbjct: 61 SQLINLTIEGT--------QYKVLPKAVELHPVTDIVRHVDFVFLE-DKTQKMEVPVVYE 111
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G + + G+++GGY N +KR V LC + +P + +D++ + + + + +K+
Sbjct: 112 GKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKVKLPEGCSF 171
Query: 236 LRSKDEPVCKIAGGRAS 252
K+ + I G R +
Sbjct: 172 TTKKEFVLATIIGRRGA 188
>gi|367471859|ref|ZP_09471458.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 285]
gi|365275834|emb|CCD83926.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 285]
Length = 189
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F++ +FD+ + + K RV+PR HL D P++V F+R A +++ VPL
Sbjct: 15 FLTTIFDISLDGK--------KHRVIPRDFHLDPVKDFPIHVDFMRLGQGATIRVSVPLH 66
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
G + +PG+++GG +N + T+ C A+ +P +I+ D+S L++ + D+K+ +
Sbjct: 67 VVGSEGAPGVKRGGTVNIVTHTLDLECLAENIPQFIEADVSALEINHSLHISDVKLPTGV 126
Query: 234 KLLRSKDEPVCKIA 247
K L D + I
Sbjct: 127 KTLSRDDSTLVTIV 140
>gi|420243915|ref|ZP_14747776.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF080]
gi|398057374|gb|EJL49341.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF080]
Length = 201
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 82/147 (55%), Gaps = 22/147 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + +EV E
Sbjct: 25 RRNGFIPAVIY--------GDKQSPLAIALSTNEVTKRI-HAGG--FMTTIATIEVNGE- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K++VLP+ L D ++V FLR + ++VP+ F ++ SPG++ GG
Sbjct: 73 -------KIQVLPKDYQLDPVRDFTMHVDFLRVSGNTEVSVEVPVHFVNEEKSPGIKIGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLS 214
LN ++ V+ LCPA+ +P ++ VDL+
Sbjct: 126 VLNIVRHEVELLCPANDIPEFLTVDLT 152
>gi|349700870|ref|ZP_08902499.1| 50S ribosomal protein L25/general stress protein Ctc
[Gluconacetobacter europaeus LMG 18494]
Length = 206
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 19/160 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFG 128
R+AG VP +++ GG + LI++ + + L +S + SR++D+ V
Sbjct: 24 RRAGHVPGVIY-------GGGQEPTLIALDPRIVHR---ELHKSGWRSRIYDISVAGG-- 71
Query: 129 SGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGY 188
V L R++ LH TDAPL+V + R + ++V + F G+++SPG+++GG
Sbjct: 72 -----PSVHALLREIQLHPVTDAPLHVDYQRLAAGHKVHVEVEVRFTGEELSPGVKRGGV 126
Query: 189 LNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
+N ++ TV + +P + DLS+LD + DLK
Sbjct: 127 MNIVRHTVDVVVDPANIPEFFTADLSKLDFHDNVRWEDLK 166
>gi|398826814|ref|ZP_10585045.1| ribosomal protein L25, Ctc-form, partial [Bradyrhizobium sp. YR681]
gi|398220202|gb|EJN06659.1| ribosomal protein L25, Ctc-form, partial [Bradyrhizobium sp. YR681]
Length = 203
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 93/185 (50%), Gaps = 24/185 (12%)
Query: 76 VPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDL 132
VP +++ GN + IS+ ++R+ + GR F++ L D+++ +
Sbjct: 30 VPGVIY--------GNNQPPLTISIADRELRQRI-LAGR--FLTTLVDIDLEGK------ 72
Query: 133 IEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTI 192
K RV+PR HL D P++V F+R A ++I VPL + SPG+++GG +N +
Sbjct: 73 --KHRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKSEASPGVKRGGTVNIV 130
Query: 193 KRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA--GGR 250
++ C + +P YI+ D+ L++ + D+K+ +K L +D + I G
Sbjct: 131 AHAIELECGVESIPQYIEADVGALEIGHSLHLTDIKLPAGVKALTREDATLVTIVPPSGY 190
Query: 251 ASDQK 255
A +QK
Sbjct: 191 AEEQK 195
>gi|83859404|ref|ZP_00952925.1| ribosomal 5S rRNA E-loop binding protein [Oceanicaulis sp.
HTCC2633]
gi|83852851|gb|EAP90704.1| ribosomal 5S rRNA E-loop binding protein [Oceanicaulis alexandrii
HTCC2633]
Length = 210
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 20/166 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISV--QTNQIRKLVGHLGRSFFVS 116
R GT + + R+ G VP +++ GG+K +S+ + N++ K + F++
Sbjct: 11 RERTGTGGARETRRNGFVPGVLY-------GGDKGPVSIALKNNEVIKAIN---SGKFLA 60
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
++ ++ + E K VL R V H D P+++ F R ++ ++V + F
Sbjct: 61 QMITIDHKGE--------KQSVLTRDVQFHPVRDEPVHIDFQRVDESTIITVEVTVHFHN 112
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
D+ SPGL++GG LN ++ V+ PA +P IDVDLS D+ I
Sbjct: 113 DEKSPGLKRGGVLNVVRHAVEVNVPAGSIPDQIDVDLSGYDIGDSI 158
>gi|384215561|ref|YP_005606727.1| 50S ribosomal protein L25 [Bradyrhizobium japonicum USDA 6]
gi|354954460|dbj|BAL07139.1| 50S ribosomal protein L25 [Bradyrhizobium japonicum USDA 6]
Length = 237
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 24/185 (12%)
Query: 76 VPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDL 132
VP +++ GN + IS++ ++R+ + GR F++ L D+++ +
Sbjct: 29 VPGVIY--------GNNQPPVTISIEDRELRQRI-LAGR--FLTTLVDIDLEGK------ 71
Query: 133 IEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTI 192
K RV+PR HL D P++V F+R A ++I VPL + SPG+++GG +N +
Sbjct: 72 --KHRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKAESSPGVKRGGTVNIV 129
Query: 193 KRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA--GGR 250
++ C + +P YI+ D+ L++ + D+K+ +K L +D + I G
Sbjct: 130 AHAIELECGVESIPQYIEADVGTLEIGHSLHLSDVKLPAGVKALTREDATLVTIVPPSGY 189
Query: 251 ASDQK 255
A +QK
Sbjct: 190 AEEQK 194
>gi|365882889|ref|ZP_09422075.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 375]
gi|365288782|emb|CCD94606.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 375]
Length = 189
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F++ +FD+ + + K RV+PR HL D P++V F+R A +++ VPL
Sbjct: 15 FLTTIFDISLDGK--------KHRVIPRDFHLDPVKDFPIHVDFMRLGQGATIRVSVPLH 66
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
G + +PG+++GG +N + T+ C A+ +P +I+ D+S L++ + D+K+ +
Sbjct: 67 VVGSEGAPGVKRGGTVNIVTHTLDLECLAENIPQFIEADVSALEINHSLHISDVKLPTGV 126
Query: 234 KLLRSKDEPVCKIA 247
K L D + I
Sbjct: 127 KTLSRDDATLVTIV 140
>gi|158425771|ref|YP_001527063.1| 50S ribosomal protein L25 [Azorhizobium caulinodans ORS 571]
gi|172047829|sp|A8HS67.1|RL25_AZOC5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|158332660|dbj|BAF90145.1| ribosomal protein L25 [Azorhizobium caulinodans ORS 571]
Length = 207
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 88/165 (53%), Gaps = 20/165 (12%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLV--GHLGRSF 113
A+ RA G + ER+AGRVP++++ ++ IS+ +I +++ GH
Sbjct: 9 AVARARGGKGAARAERRAGRVPAVIYGEKQ-----EPVTISLGHKEITRIIYAGH----- 58
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F++ LF+++V K RV+PR L D PL+V FLR A + ++VP+
Sbjct: 59 FLTTLFEIDVDGV--------KHRVIPRDYQLDPVKDLPLHVDFLRVSQGASVTVEVPVH 110
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDV 218
F D +PGL+ GG LN + V CPA+ +P ++ DL+ L++
Sbjct: 111 FENQDKAPGLKSGGTLNVVAHAVALECPAEAIPDHVVADLTGLEI 155
>gi|359789667|ref|ZP_09292603.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359254464|gb|EHK57472.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 282
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+KV+VLP+ L D P++V FLR + + ++VP+ F ++ SPG+++GG LN ++
Sbjct: 141 KKVQVLPKDYQLDPVRDFPMHVDFLRIGKDTEVNVNVPVHFINEEKSPGIKRGGVLNIVR 200
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK-LLRSKDEPVCKIAGGRA 251
V+F CPA+ +P I +DL+ D+ I +K+ +K ++ +D + +A A
Sbjct: 201 HEVEFHCPANAIPDSITIDLTGTDIGDSIHISAVKLPAGVKPVISDRDFTIATVASSSA 259
>gi|392380061|ref|YP_004987219.1| 50S ribosomal protein L25 [Azospirillum brasilense Sp245]
gi|356882428|emb|CCD03440.1| 50S ribosomal protein L25 [Azospirillum brasilense Sp245]
Length = 203
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGRSFFVS 116
RA GT + + R+ GR+P++++ GG + +IS++ +++ G F +
Sbjct: 14 RAGKGT--ARQTRRDGRIPAVIY-------GGKQAPIMISLEKFTFTRVLNQAG---FFT 61
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
LFD+ V RVLPR V H TD PL+V FLR E + VP+ F
Sbjct: 62 HLFDVTVDGA--------THRVLPRDVQFHPVTDVPLHVDFLRVSAETRTTVQVPVEFVD 113
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+ SPGL++GG LN ++ + A +P I + DV I +K+
Sbjct: 114 QEKSPGLKRGGVLNIVRHELDVTVSAGNIPEQITISCEGYDVGDSIHISSVKL 166
>gi|39937416|ref|NP_949692.1| 50S ribosomal protein L25 [Rhodopseudomonas palustris CGA009]
gi|192293199|ref|YP_001993804.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodopseudomonas palustris TIE-1]
gi|68053168|sp|Q6N1P8.3|RL25_RHOPA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC; AltName: Full=RRP-L25
gi|226736356|sp|B3Q7X4.1|RL25_RHOPT RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|39651275|emb|CAE29797.1| putative 50S ribosomal protein L25 [Rhodopseudomonas palustris
CGA009]
gi|192286948|gb|ACF03329.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Rhodopseudomonas palustris TIE-1]
Length = 230
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 95 ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLN 154
ISV+ ++R + GR F++ +FD+ + + K RV+PR HL D P++
Sbjct: 43 ISVEEKELRLRI-LAGR--FLTTVFDVVLDGK--------KHRVIPRDYHLDPVRDFPIH 91
Query: 155 VTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
V FLR A +++ VPL +G +V+PG+++GG N + TV+ PA+ +P +I+ D+S
Sbjct: 92 VDFLRLGAGATIRVSVPLHLKGLEVAPGVKRGGTFNIVTHTVELEAPAENIPQFIEADVS 151
Query: 215 ELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA 247
LD+ + D+ + +K + D + I
Sbjct: 152 TLDIGVSLHLSDIALPTGVKSVSRDDVTLVTIV 184
>gi|330993035|ref|ZP_08316973.1| 50S ribosomal protein L25 [Gluconacetobacter sp. SXCC-1]
gi|329759805|gb|EGG76311.1| 50S ribosomal protein L25 [Gluconacetobacter sp. SXCC-1]
Length = 205
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 15/158 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+AG VP +++ G LI++ R + L +S + SR++D+ V E G+
Sbjct: 24 RRAGLVPGVIYGA-----GQEPVLIALDP---RIVYRELHKSGWRSRIYDISV--EKGA- 72
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
V L R+V LH +DAP++V + R + ++V + F G++VSPG+++GG +N
Sbjct: 73 ----SVHALLREVQLHPVSDAPIHVDYQRLAAGHKVHVEVEIRFEGEEVSPGVKRGGVMN 128
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
++ TV + +P + DLS+LD + DLK
Sbjct: 129 IVRHTVDVVVDPANIPEFFTADLSKLDFHDNVRWEDLK 166
>gi|386351842|ref|YP_006050090.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodospirillum rubrum F11]
gi|346720278|gb|AEO50293.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodospirillum rubrum F11]
Length = 179
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 8/138 (5%)
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
++ F SRLFDL V E RV+ + V H TD P++V FLR + + + +
Sbjct: 25 KAGFSSRLFDLTVEGG-------ETHRVMVQDVQFHPVTDMPIHVDFLRIGKDTEVTVAI 77
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVH 230
P+ F + SPGL++GG LN ++ ++ D +P + +VDL+ +V I G +K+
Sbjct: 78 PVHFINETASPGLKRGGVLNVVRHEIEVHGRPDALPDFFEVDLTGAEVGDSIHVGVVKIP 137
Query: 231 PALK-LLRSKDEPVCKIA 247
++ ++ +D +C IA
Sbjct: 138 EGVRPVIAERDFTICTIA 155
>gi|407769661|ref|ZP_11117035.1| 50S ribosomal protein L25/general stress protein Ctc [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407287178|gb|EKF12660.1| 50S ribosomal protein L25/general stress protein Ctc [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 206
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 19/194 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G +V R+AG VP +++ G + + Q + R L L + F S +
Sbjct: 13 RAGKGAARAV--RRAGMVPGVIY-------GAKQEPVLFQIDP-RPLNKLLHKQGFFSHI 62
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
D+++ E VLPR V TDAP++V FLR + ++VP+ F ++
Sbjct: 63 LDVKIGKE--------TYEVLPRDVQFDKVTDAPIHVDFLRFAKGQTMTVEVPVRFVNEE 114
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL-LR 237
SPGL+KGG LN ++ V+ C + +P + DL+ ++V I +K+ ++L +
Sbjct: 115 KSPGLKKGGVLNIVRHDVEVECAPNAIPEELVFDLTGVEVGDSIHISAIKLPKGVELTIT 174
Query: 238 SKDEPVCKIAGGRA 251
+D V +A A
Sbjct: 175 DRDFTVATVAAPSA 188
>gi|407973854|ref|ZP_11154765.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor indicus C115]
gi|407430914|gb|EKF43587.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor indicus C115]
Length = 210
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 57/89 (64%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K++VLP+ L D PL+V FLR ++ ++VP+ F ++ +PG+++GG LN ++
Sbjct: 72 KKIQVLPKDYQLDPVRDVPLHVDFLRIGKGTVVTVNVPVHFTNEEAAPGIKRGGVLNIVR 131
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
V+F CPA +P +I+VDL+ D+ I
Sbjct: 132 HEVEFSCPAIAIPEFIEVDLTGSDIGDSI 160
>gi|296284047|ref|ZP_06862045.1| 50S ribosomal protein L25/general stress protein Ctc
[Citromicrobium bathyomarinum JL354]
Length = 226
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 16/161 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G S R+ GRVP++++ GG + + + R+LV L
Sbjct: 6 TLPAETRDRAGKGASRALRREGRVPAVIY-------GGKEEPTPIHVEE-RELVRQLDTG 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F++ + +LEV + KVR LP+ V LH TD P +V FLR A + + VP+
Sbjct: 58 HFMNSIIELEVGGK--------KVRTLPKDVALHPVTDRPEHVDFLRLTKGAKVDVSVPV 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDL 213
VF ++ SPGL+KGG LN ++ ++ +C AD +P I + +
Sbjct: 110 VFVDEEESPGLKKGGVLNVVRHELELVCEADKIPGEITISV 150
>gi|114797515|ref|YP_760114.1| 50S ribosomal protein L25/general stress protein Ctc [Hyphomonas
neptunium ATCC 15444]
gi|114737689|gb|ABI75814.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hyphomonas
neptunium ATCC 15444]
Length = 219
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 99/193 (51%), Gaps = 21/193 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLV--GHLGRSFFVS 116
R GT + + R G VP +++ G + IS++ N++ K + GH F+S
Sbjct: 13 RERTGTGGAREARNNGFVPGVLY-----GGGIDPVAISLKKNEVIKAIETGH-----FLS 62
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
L + E + V+P+ + +H TD P++V R + ++K++VP+ F G
Sbjct: 63 ATATLIHKGE--------RQLVIPQGIQMHPVTDQPMHVDLRRIKVDQIIKVEVPVHFTG 114
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALKL 235
+ SPGL+KGG LN ++ +V+ PA +P ++ D+S+L+V + ++ + A +
Sbjct: 115 MEASPGLKKGGTLNVVRHSVELNVPAGKIPEALEADISKLEVGDNVKISNITLPEGAEPV 174
Query: 236 LRSKDEPVCKIAG 248
+ +D + IAG
Sbjct: 175 ITDRDFTIATIAG 187
>gi|170740629|ref|YP_001769284.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium sp. 4-46]
gi|226736339|sp|B0UGY1.1|RL25_METS4 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|168194903|gb|ACA16850.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium sp. 4-46]
Length = 217
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 17/192 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A+ R G + R+ GRVP++++ G + + IS+ NQ L+ G F+
Sbjct: 9 AVARDRVGKGAARAVRRQGRVPAVIYGG-----GQSPQSISLDANQTHHLIYGGG---FL 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S +F++ V +R +PR L D PL+V FLR ++++VP+ F
Sbjct: 61 STVFEIAVDGR--------TIRAIPRDYQLDPVKDTPLHVDFLRVVSGQTIEVEVPVHFV 112
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
D +PGL+ K G LN + T+ D +P ++VDL+ D+ + DL +
Sbjct: 113 NQDAAPGLKQKSGTLNVVLHTITLAVSPDAIPDAVNVDLTGKDIGDTVHVSDLVLPTGAS 172
Query: 235 LLRSKDEPVCKI 246
L + E V +
Sbjct: 173 LALAPSETVATL 184
>gi|46201115|ref|ZP_00055742.2| COG1825: Ribosomal protein L25 (general stress protein Ctc)
[Magnetospirillum magnetotacticum MS-1]
Length = 202
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 87/177 (49%), Gaps = 15/177 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
I A R G + R+AG+VP +++ G K I +Q + R + + ++
Sbjct: 6 AIAAELRDGSGKGAARATRRAGKVPGVIY-------GDKKAAICIQMDP-RVVWAQISKT 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F ++LF++++ + K L R V +H +D P++V F+R + + + VP+
Sbjct: 58 GFFTQLFNVDLGKD-------GKHLCLARDVQMHPVSDQPIHVDFMRVSADHAIHVKVPV 110
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F + SPG++KGG LN ++ C + +P I +DL +++ + DLK+
Sbjct: 111 HFTNEAKSPGIKKGGVLNVELHEIEITCSPEDIPHEILIDLDGMEIGASVHLKDLKL 167
>gi|431805518|ref|YP_007232419.1| 50S ribosomal protein L25 [Liberibacter crescens BT-1]
gi|430799493|gb|AGA64164.1| LSU ribosomal protein L25p [Liberibacter crescens BT-1]
Length = 200
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 85/171 (49%), Gaps = 16/171 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S + R+ +P++++ G+K+ + + R++V L F++ +
Sbjct: 14 RGKVGKGSSRELRRKNLIPAVIY--------GDKKPPTSISLSTREIVKRLNNGGFMTTI 65
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
+ + KV VLP+ L+ TD+ ++V FLR + + + VP+ F +D
Sbjct: 66 LTVNIEGN--------KVLVLPKSYQLNPVTDSIIHVDFLRISENSKVSVQVPIHFINED 117
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
SPG+++ G LN + ++ CP + +P +I VDLS L + I D+++
Sbjct: 118 KSPGIKQSGILNIVCHEIELRCPTNNIPNFITVDLSSLKISDNIHISDIEL 168
>gi|298292447|ref|YP_003694386.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Starkeya
novella DSM 506]
gi|296928958|gb|ADH89767.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Starkeya
novella DSM 506]
Length = 212
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 16/191 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A RA G + ER+AGRVP++++ DG+ L V+ N+I GH F+
Sbjct: 9 ATARAKVGKGAARAERRAGRVPAVIYG--DGKAPVGITLDHVEINKII-YAGH-----FL 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ LF+++V + K RV+PR L D PL+V FLR A L +DVP+ F
Sbjct: 61 TTLFNVDVDGQ--------KHRVIPRDYQLDPVKDFPLHVDFLRVAVGATLTVDVPVHFL 112
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
+ +P L++GG LN + V PA+ +P I+VDL++ I +K+ +
Sbjct: 113 NQETAPALKQGGTLNIVSHAVSLNVPAEAIPEAIEVDLTKYGFGDSIHLSAIKLPAGVTW 172
Query: 236 LRSKDEPVCKI 246
D+ + I
Sbjct: 173 AGHGDDTLATI 183
>gi|92118571|ref|YP_578300.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrobacter
hamburgensis X14]
gi|122417117|sp|Q1QIV7.1|RL25_NITHX RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91801465|gb|ABE63840.1| LSU ribosomal protein L25P [Nitrobacter hamburgensis X14]
Length = 233
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 88/161 (54%), Gaps = 13/161 (8%)
Query: 88 HGGNK--RLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHL 145
+G N+ + ISV+ ++R+ + GR F++ +FD+ + + K RV+PR HL
Sbjct: 34 YGNNQPPQPISVEEPELRQRI-LAGR--FLTTVFDISLEGK--------KHRVIPRDFHL 82
Query: 146 HSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIV 205
D P++V FLR A +++ +P+ DV+PG+++GG +N + + C AD +
Sbjct: 83 DPVKDFPIHVDFLRLGEGATIRVSIPIRLLKADVAPGVKRGGTVNLVIHAIDVECAADDI 142
Query: 206 PPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
P +I+ D+ L++ + D+++ P +K L +D + I
Sbjct: 143 PQFIEADVGGLEMSHSLHLSDVELPPGVKPLAREDMTLVTI 183
>gi|209886302|ref|YP_002290159.1| 50S ribosomal protein L25 [Oligotropha carboxidovorans OM5]
gi|337740154|ref|YP_004631882.1| 50S ribosomal protein L25 [Oligotropha carboxidovorans OM5]
gi|386029171|ref|YP_005949946.1| 50S ribosomal protein L25 [Oligotropha carboxidovorans OM4]
gi|226736343|sp|B6JIP4.1|RL25_OLICO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|209874498|gb|ACI94294.1| ribosomal protein L25, Ctc-form [Oligotropha carboxidovorans OM5]
gi|336094239|gb|AEI02065.1| 50S ribosomal protein L25 [Oligotropha carboxidovorans OM4]
gi|336097818|gb|AEI05641.1| 50S ribosomal protein L25 [Oligotropha carboxidovorans OM5]
Length = 240
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 86/159 (54%), Gaps = 16/159 (10%)
Query: 76 VPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEK 135
VP++++ G NK +++ + + L + F++ LF++++ + K
Sbjct: 29 VPAVIY-------GDNKPPVTISLDD-KALRQSIFAGHFLTTLFNIDLDGQ--------K 72
Query: 136 VRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRT 195
RV+PR L D PL+V FLR A +++ VPL +G ++SPG+++GG +N + T
Sbjct: 73 YRVIPRDYALDPVKDFPLHVDFLRLGEGATIRVSVPLHVKGAELSPGVKRGGTVNIVNHT 132
Query: 196 VKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
V+ D +P +I+VD+S+L++ + D+ + +K
Sbjct: 133 VELEAEVDHIPQFIEVDVSKLEINNSVHLNDVALPKGVK 171
>gi|299134267|ref|ZP_07027460.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Afipia sp.
1NLS2]
gi|298591014|gb|EFI51216.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Afipia sp.
1NLS2]
Length = 242
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 90/165 (54%), Gaps = 16/165 (9%)
Query: 76 VPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEK 135
VP++++ G NK +++ + + L ++ F++ LF++++ + K
Sbjct: 29 VPAVIY-------GDNKPPVTISLDD-KALRQNIFAGHFLTTLFNIDLDGQ--------K 72
Query: 136 VRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRT 195
RV+PR L D PL+V FLR A +++ VPL +G +VSPG+++GG +N + T
Sbjct: 73 HRVIPRDYSLDPVKDFPLHVDFLRLGKGATIRVSVPLHVKGAEVSPGVKRGGTVNMVNHT 132
Query: 196 VKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKD 240
V+ + +P +I+VD+S+L++ + D+++ +K + D
Sbjct: 133 VELEADVEQIPQFIEVDVSKLEINNSLHLSDVQLPKGVKPVSRDD 177
>gi|162146757|ref|YP_001601216.1| 50S ribosomal protein L25/general stress protein Ctc
[Gluconacetobacter diazotrophicus PAl 5]
gi|209543256|ref|YP_002275485.1| 50S ribosomal protein L25/general stress protein Ctc
[Gluconacetobacter diazotrophicus PAl 5]
gi|189042360|sp|A9HC01.1|RL25_GLUDA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|161785332|emb|CAP54878.1| 50S ribosomal protein L25 [Gluconacetobacter diazotrophicus PAl 5]
gi|209530933|gb|ACI50870.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Gluconacetobacter diazotrophicus PAl 5]
Length = 206
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 20/169 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G+VP++++ G K+ ++ R +V + R + SR++D+ V
Sbjct: 24 RRDGQVPAVIY--------GAKQEPTLVALDPRLVVREMQRGGWRSRVYDVTVDGASSPA 75
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
L R++ LH +D P++V F R + ++V +VF G+D SPG+++GG LN
Sbjct: 76 --------LMREIQLHPVSDKPIHVDFQRLAAGERVHVEVRIVFTGEDKSPGIKRGGVLN 127
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK----VHPALKL 235
++ TV+ +P VDLS+LD+ + DL+ V P L++
Sbjct: 128 IVRHTVEVSADPANIPESFTVDLSQLDIHDNVRWDDLQGTGSVTPTLQI 176
>gi|58039600|ref|YP_191564.1| 50S ribosomal protein L25 [Gluconobacter oxydans 621H]
gi|68053025|sp|Q5FRT8.1|RL25_GLUOX RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|58002014|gb|AAW60908.1| LSU ribosomal protein L25P [Gluconobacter oxydans 621H]
Length = 218
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G VP++++ G K+ S+ R ++ L R + SR+++L
Sbjct: 24 RREGLVPAVIY--------GGKQEPSIIALDPRVIMKELHRGGWSSRVYNLAAEGA---- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
E V L R V LH TDAP++V F R + ++V + F G++ SPG+++GG LN
Sbjct: 72 ---EPVAALIRDVQLHPVTDAPIHVDFQRVAAGTKVHVEVSIAFVGEEKSPGIKRGGVLN 128
Query: 191 TIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLK 228
++ V PA+I P + +LS LD+ + DLK
Sbjct: 129 VVRHYVDVQADPANI-PEHFTAELSGLDIHDNVRWTDLK 166
>gi|117924129|ref|YP_864746.1| 50S ribosomal protein L25 [Magnetococcus marinus MC-1]
gi|117607885|gb|ABK43340.1| LSU ribosomal protein L25P [Magnetococcus marinus MC-1]
Length = 198
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 18/186 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTN--QIRKLVGHLG 110
T + R G V+ K R+ GR+P++V+ G K IS++ N R + G
Sbjct: 3 TFETVTREGLGKGVARKLRQQGRIPAVVY-------GAGKENISLEMNLNAFRVAIAGQG 55
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
+ F + + L V + + VL R V H TD P +V FLR P ++ + V
Sbjct: 56 PTLF-NTVHQLSVDGKVEN--------VLVRGVQRHPVTDLPEHVDFLRLDPTKMITVHV 106
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVH 230
P+ R +D +PGL++GG + ++ ++ C + +P I VD +E+++ + I D+ +
Sbjct: 107 PVHLRNEDQAPGLKRGGIIQIVRHELEIHCLSGNIPTEILVDCAEMEIGKSIHIEDITLP 166
Query: 231 PALKLL 236
K+
Sbjct: 167 EGTKVF 172
>gi|357032397|ref|ZP_09094336.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconobacter
morbifer G707]
gi|356414169|gb|EHH67817.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconobacter
morbifer G707]
Length = 185
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 88 HGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHS 147
+GG + + + + R ++ L R + SR+++L+V S E V L R V LH
Sbjct: 3 YGGKQEPVIISLDP-RLVLKELHRGGWSSRVYNLQVESG-------EPVPALIRDVQLHP 54
Query: 148 GTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPP 207
TDAPL+V F R + + V + F G++ +PG+++GG LN ++ +V +P
Sbjct: 55 VTDAPLHVDFQRVAAGHKVHVQVAIAFTGEEQAPGIKRGGVLNVVRHSVDVEVDPVSIPE 114
Query: 208 YIDVDLSELDVEQKILAGDLK 228
+ VDLS LD+ + DLK
Sbjct: 115 HFTVDLSALDIHDSVRWEDLK 135
>gi|338971774|ref|ZP_08627156.1| LSU ribosomal protein L25p [Bradyrhizobiaceae bacterium SG-6C]
gi|338235082|gb|EGP10190.1| LSU ribosomal protein L25p [Bradyrhizobiaceae bacterium SG-6C]
Length = 237
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 8/124 (6%)
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F++ +F++++ + K RV+PR L D PL+V FLR A +++ VPL
Sbjct: 59 FLTTIFNIDLDGK--------KHRVIPRDFSLDPVKDFPLHVDFLRLGAGAKIRVSVPLH 110
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
G +VSPG+++GG +N + TV+ + +P +I+VD+S+L++ + D+++ +
Sbjct: 111 VTGAEVSPGVKRGGTVNIVNHTVELEADVEHIPQFIEVDVSKLEINNSVHLSDVQLPQGV 170
Query: 234 KLLR 237
K LR
Sbjct: 171 KALR 174
>gi|414168517|ref|ZP_11424480.1| 50S ribosomal protein L25, partial [Afipia clevelandensis ATCC
49720]
gi|410887253|gb|EKS35063.1| 50S ribosomal protein L25, partial [Afipia clevelandensis ATCC
49720]
Length = 217
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 8/124 (6%)
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F++ +F++++ + K RV+PR L D PL+V FLR A +++ VPL
Sbjct: 59 FLTTIFNIDLDGK--------KHRVIPRDFSLDPVKDFPLHVDFLRLGAGAKIRVSVPLH 110
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
G +VSPG+++GG +N + TV+ + +P +I+VD+S+L++ + D+++ +
Sbjct: 111 VTGAEVSPGVKRGGTVNIVNHTVELEADVEHIPQFIEVDVSKLEINNSVHLSDVQLPQGV 170
Query: 234 KLLR 237
K LR
Sbjct: 171 KALR 174
>gi|390451314|ref|ZP_10236890.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor aquibiodomus RA22]
gi|389661154|gb|EIM72783.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor aquibiodomus RA22]
Length = 217
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 82/148 (55%), Gaps = 16/148 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G+VP++++ ++D I++ ++ + G F++ + ++V +
Sbjct: 25 RRNGKVPAVIYGEKDAPLS-----ITLPYKEVSMKIFGGG---FLTTIATIDVDGK---- 72
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
K++VLP+ L D ++V FLR ++ ++VP+ F ++ +PG+++GG LN
Sbjct: 73 ----KIQVLPKDYQLDPVRDFVMHVDFLRIGKGTVVTVNVPVHFINEETAPGIKRGGVLN 128
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDV 218
++ V+F CPA +P YI+VDL +D+
Sbjct: 129 VVRHEVEFTCPATAIPDYIEVDLDGMDI 156
>gi|329851267|ref|ZP_08266024.1| ribosomal protein L25, Ctc-form [Asticcacaulis biprosthecum C19]
gi|328840113|gb|EGF89685.1| ribosomal protein L25, Ctc-form [Asticcacaulis biprosthecum C19]
Length = 198
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL--ISVQTNQIRKLVGHLGRSFFVS 116
R GT + R G++P +++ GG+K I+V N RK S
Sbjct: 11 RERTGTGGARATRNDGKLPGVLY-------GGDKGPVPIAVNLNAFRK-------SLSTG 56
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
+L V ++G E +V+ + + H TD P++ R A ++I VP+ F+
Sbjct: 57 KLNGHLVTLKYGE----ETQKVIAKSIDFHPVTDVPVHFDLFRVDEHAKIRISVPVHFKN 112
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
++SPGL+KGG LN ++ PAD +P I +DL+ L++ Q + DLK+
Sbjct: 113 HELSPGLKKGGALNVAFHELEIQVPADHIPEDIIIDLTGLEIGQSVHISDLKL 165
>gi|378826775|ref|YP_005189507.1| 50S ribosomal protein L25 [Sinorhizobium fredii HH103]
gi|365179827|emb|CCE96682.1| 50S ribosomal protein L25 [Sinorhizobium fredii HH103]
Length = 203
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 23/182 (12%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ T ++ + H G F++ + ++V E
Sbjct: 24 RRNGLIPAVIY--------GDKQAPLSITLSTKEVTMKI-HAGG--FMTTVATIDVNGE- 71
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K+RVLP+ L D ++V FLR + + + VP+ F ++ SPGL++GG
Sbjct: 72 -------KIRVLPKDYQLDPVRDFTMHVDFLRVSKGSQVSVQVPVHFENEEKSPGLKQGG 124
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALKLLRSKDEPVCKI 246
LN ++ V+ AD +P ++ VDLS L + + D+K+ A ++ +D V I
Sbjct: 125 TLNIVRHEVELNVSADNIPEFLSVDLSGLKIGDTVHISDVKLPAGATPVIADRDFTVATI 184
Query: 247 AG 248
AG
Sbjct: 185 AG 186
>gi|281420709|ref|ZP_06251708.1| ribosomal protein L25, Ctc-form [Prevotella copri DSM 18205]
gi|281405482|gb|EFB36162.1| ribosomal protein L25, Ctc-form [Prevotella copri DSM 18205]
Length = 201
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 17/193 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSR 117
R G + S RK G +P ++ ++ G++G + L +V ++RK++ + + ++
Sbjct: 11 RTDLGKKASKTLRKEGLIPCNLYGEKKGENGAPEALSFAVPFAELRKII-YTPHVYVINL 69
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
+ D E + + +++ H TDAPL+V F + + I +P+ G
Sbjct: 70 IIDGESHT------------AIMKEIQFHPTTDAPLHVDFYEVNDQKPITIGIPVKLTG- 116
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
++ G+R GG +N R + P ++P ++D+D++EL + + I GDL L+L
Sbjct: 117 -LAQGVRDGGRMNLSIRKINVTAPYQVIPEHLDIDVTELKIGKSIKVGDLSFE-GLELAT 174
Query: 238 SKDEPVCKIAGGR 250
SK VC I R
Sbjct: 175 SKAVVVCSIKMTR 187
>gi|124483376|emb|CAM32561.1| 50S ribosomal subunit protein L25 [Herbaspirillum seropedicae]
Length = 202
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A PR GT S + R+AG+ P IV+ GG +++ + L L +
Sbjct: 3 VIAFPRKEQGTGASRRLRRAGQTPGIVY-------GGTAAPLNIAVDH-NALYHALKKET 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLE+ + +VL R +H+ L+V F R L VPL
Sbjct: 55 FHSSILDLEIEGKVE--------QVLLRDFQVHAYKQLVLHVDFQRVDASQKLHTKVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F +VSP ++ GG ++ + + C +P +I+VDL++LDV Q I DLK+
Sbjct: 107 FVNAEVSPAVKLHGGIISHVAAELDVTCLPKNLPEFIEVDLAKLDVGQSIHLADLKL 163
>gi|451940911|ref|YP_007461549.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
australis Aust/NH1]
gi|451900298|gb|AGF74761.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
australis Aust/NH1]
Length = 208
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 96/182 (52%), Gaps = 23/182 (12%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P+I++ GNK+ ++V +I + H G F + + +EV +
Sbjct: 24 RRDGLIPAIIY--------GNKQPPLAVAVSYKEIFYKI-HAGG--FRTTVATVEVGKQ- 71
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K++VLP+ L D P++V FLR E+++++D+P+ F +D++PG+++GG
Sbjct: 72 -------KIQVLPKDYQLDPVRDVPVHVDFLRISAESVVQVDIPVHFLNEDIAPGIKRGG 124
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALKLLRSKDEPVCKI 246
LN ++ ++ PA+ +P I +DLS + I +++ + +++ +D + I
Sbjct: 125 VLNIVRHEIECTAPANAIPESIKIDLSGYSIGDSIHISAVQLPEGVVPVIQDRDFTIATI 184
Query: 247 AG 248
A
Sbjct: 185 AA 186
>gi|157803533|ref|YP_001492082.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
canadensis str. McKiel]
gi|166223714|sp|A8EY64.1|RL25_RICCK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|157784796|gb|ABV73297.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
canadensis str. McKiel]
Length = 204
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 86/163 (52%), Gaps = 17/163 (10%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT + R+ GRVP+I++ G K +S+ + +++ + + F+
Sbjct: 9 AQSRTEFGTGAARALRREGRVPAIIY-------GAGKTPVSISLEE-KEITKYYRKPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S+L +L + + + +VLP+ V LH TD +V F+ E K++VP+V+
Sbjct: 61 SQLINLTIDKK--------QYKVLPKAVELHPVTDIVRHVDFVFLE-EKKQKMEVPVVYE 111
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDV 218
G + + G+++GGY N +KR V LC + +P + +D++ + +
Sbjct: 112 GKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPI 154
>gi|379022730|ref|YP_005299391.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
canadensis str. CA410]
gi|376323668|gb|AFB20909.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
canadensis str. CA410]
Length = 204
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 86/163 (52%), Gaps = 17/163 (10%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT + R+ GRVP+I++ G K +S+ + +++ + + F+
Sbjct: 9 AQSRTEFGTGAARALRREGRVPAIIY-------GAGKTPVSISLEE-KEITKYYRKPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S+L +L + + + +VLP+ V LH TD +V F+ E K++VP+V+
Sbjct: 61 SQLINLTIDKK--------QYKVLPKAVELHPVTDIVRHVDFVFLE-EKKQKMEVPVVYE 111
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDV 218
G + + G+++GGY N +KR V LC + +P + +D++ + +
Sbjct: 112 GKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPI 154
>gi|345870956|ref|ZP_08822905.1| 50S ribosomal protein L25 [Thiorhodococcus drewsii AZ1]
gi|343921110|gb|EGV31834.1| 50S ribosomal protein L25 [Thiorhodococcus drewsii AZ1]
Length = 206
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A PR + G S + R+ G+VP I++ G H ++SV N++ K HL
Sbjct: 7 VIAQPRETAGKGASRRLRRTGQVPVILY----GAHQ-EPEMLSVAHNELLK---HLDNEA 58
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DL+V GD + +V+ + + H L+V F+R + LK+ VPL
Sbjct: 59 FYSHVLDLKV------GD--KATKVVLKDMQRHPSKPFILHVDFMRVSQDEKLKMVVPLH 110
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
F ++ G + GG ++ V+ +C +P YI +DL+EL++ + +L + +
Sbjct: 111 FLNEETCAGAKAGGLVSHNITEVEIVCLPKDLPEYITLDLAELEIGAVVHLSELVMPEGV 170
Query: 234 KLLRS--KDEPVCKIAGGR 250
L + DEPV I G R
Sbjct: 171 ALSHAPESDEPVVAIHGPR 189
>gi|218675424|ref|ZP_03525093.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli GR56]
Length = 204
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 22/147 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + +EV +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPIAIALNTNEVTKRI-HAGG--FMTTVATIEVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D ++V FLR + +++P+ F + SPGL+ GG
Sbjct: 73 -------KYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVSVEIPVHFTNEAKSPGLKVGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLS 214
LN ++ V+ CPAD +P + D+DLS
Sbjct: 126 VLNIVRHQVEVHCPADAIPEFFDIDLS 152
>gi|190892768|ref|YP_001979310.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli CIAT 652]
gi|190698047|gb|ACE92132.1| 50S ribosomal protein L25 [Rhizobium etli CIAT 652]
Length = 203
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 22/147 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + +EV +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPIAIALNTNEVTKRI-HAGG--FMTTVATIEVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D ++V FLR + +++P+ F + SPGL+ GG
Sbjct: 73 -------KYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVSVEIPVHFINEAKSPGLKVGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLS 214
LN ++ V+ CPAD +P + D+DLS
Sbjct: 126 VLNIVRHEVEVHCPADAIPEFFDIDLS 152
>gi|386398380|ref|ZP_10083158.1| ribosomal protein L25, Ctc-form [Bradyrhizobium sp. WSM1253]
gi|385739006|gb|EIG59202.1| ribosomal protein L25, Ctc-form [Bradyrhizobium sp. WSM1253]
Length = 239
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 90/181 (49%), Gaps = 18/181 (9%)
Query: 76 VPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEK 135
VP +++ G N+ +++ + R+L + F++ L D+++ K
Sbjct: 29 VPGVIY-------GNNQPPLTISVDD-RELRSRILAGRFLTTLVDIDLEGN--------K 72
Query: 136 VRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRT 195
RV+PR HL D P++V F+R A ++I VPL + SPG+++GG +N +
Sbjct: 73 HRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKAEGSPGVKRGGAVNIVAHA 132
Query: 196 VKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA--GGRASD 253
++ C + +P +I+ D+ L++ + D+K+ +K L S+D + I G A +
Sbjct: 133 IELECGVENIPQFIEADVGSLEIGHSLHLSDIKLPAGVKALTSEDATLVTIVPPSGYAEE 192
Query: 254 Q 254
Q
Sbjct: 193 Q 193
>gi|227822859|ref|YP_002826831.1| 50S ribosomal protein L25 [Sinorhizobium fredii NGR234]
gi|227341860|gb|ACP26078.1| 50S ribosomal protein L25 [Sinorhizobium fredii NGR234]
Length = 228
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
EK+RVLP+ L D ++V FLR + + + VP+ F ++ SPGL++GG LN ++
Sbjct: 96 EKIRVLPKDYQLDPVRDFTMHVDFLRVSKGSQVSVQVPVHFENEEKSPGLKQGGTLNIVR 155
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALKLLRSKDEPVCKIAG 248
V+ AD +P ++ VDLS L + + D+K+ A ++ +D V IAG
Sbjct: 156 HEVELNVSADNIPEFLSVDLSGLKIGDTVHISDVKLPAGATPVIADRDFTVATIAG 211
>gi|402820621|ref|ZP_10870188.1| rplY protein [alpha proteobacterium IMCC14465]
gi|402511364|gb|EJW21626.1| rplY protein [alpha proteobacterium IMCC14465]
Length = 217
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 86/162 (53%), Gaps = 22/162 (13%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R G++P++++ G+K+ I+V+ + I KL GR +S L ++V
Sbjct: 24 RNIGKIPAVLY--------GDKKDPESITVEQSDITKLYNS-GR--LMSTLIQIDV---- 68
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
+GD K R + R V LH D L+ FLR A + +++ + F ++ PGL+ GG
Sbjct: 69 -NGD---KTRAIARDVQLHPVKDFILHADFLRLGKGAKIAVEIAVHFLNEETCPGLKSGG 124
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
LN ++ V+ CPA +P +I++DL+E ++ + D+K+
Sbjct: 125 VLNVVRYQVELNCPASEIPEFIELDLAEANIGDSLHISDVKL 166
>gi|395789660|ref|ZP_10469170.1| 50S ribosomal protein L25 [Bartonella taylorii 8TBB]
gi|395428498|gb|EJF94574.1| 50S ribosomal protein L25 [Bartonella taylorii 8TBB]
Length = 208
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 57/89 (64%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+KV VLP+ L D PL+V FLR ++++++++P+ F +D +PGL+KGG LN ++
Sbjct: 71 QKVTVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ + PA+ +P I++DLS + I
Sbjct: 131 HEIECIAPANAIPEAIEIDLSSYSIGDSI 159
>gi|440227374|ref|YP_007334465.1| 50S ribosomal protein L25, Ctc-form [Rhizobium tropici CIAT 899]
gi|440038885|gb|AGB71919.1| 50S ribosomal protein L25, Ctc-form [Rhizobium tropici CIAT 899]
Length = 205
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%), Gaps = 22/149 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + ++V +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPVSIALNTNEVTKRI-HAGG--FLTTIATIDVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K++VLP+ L D L+V FLR + +++P+ F + SPGL+ GG
Sbjct: 73 -------KIKVLPKDYQLDPVRDFTLHVDFLRVSGNTAVTVEIPVHFENHEKSPGLKAGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSEL 216
LN ++ V+ CPAD +P + VDL+ L
Sbjct: 126 VLNIVRHEVEVHCPADAIPEFFTVDLTGL 154
>gi|421591137|ref|ZP_16036042.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium sp.
Pop5]
gi|403703468|gb|EJZ19690.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium sp.
Pop5]
Length = 202
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 93/185 (50%), Gaps = 25/185 (13%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + +EV +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPIAIALNTNEVTKRI-HAGG--FMTTVATIEVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D L+V FLR + +++P+ F +D S GL+ GG
Sbjct: 73 -------KYKVLPKDYQLDPVRDFTLHVDFLRVSGNTQVTVEIPVHFINEDKSQGLKVGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI- 246
LN ++ V+ CPAD +P + +VDLS + I ++ + + + +D + I
Sbjct: 126 VLNIVRHEVEVHCPADAIPEFFNVDLSGKKIGDSIHISEVTLPKGVTTVIDRDFTIATII 185
Query: 247 --AGG 249
AGG
Sbjct: 186 APAGG 190
>gi|403530240|ref|YP_006664769.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
quintana RM-11]
gi|403232312|gb|AFR26055.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
quintana RM-11]
Length = 208
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K+ VLP+ L D P++V FLR ++++++ +P+ F +D +PGL+KGG LN ++
Sbjct: 71 QKIMVLPKDYQLDPVRDFPIHVDFLRVSAQSVVEVSIPVHFFNEDTAPGLKKGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALKLLRSKDEPVCKIAG 248
++ + PA+ +P I++DLS + I +K+ +++ +D + IA
Sbjct: 131 HEIECIAPANAIPEAIEIDLSNYSIGDSIHISAVKLPKDVTPVIQDRDFTIATIAA 186
>gi|83943888|ref|ZP_00956345.1| ribosomal protein L25 [Sulfitobacter sp. EE-36]
gi|83953528|ref|ZP_00962250.1| ribosomal protein L25 [Sulfitobacter sp. NAS-14.1]
gi|83842496|gb|EAP81664.1| ribosomal protein L25 [Sulfitobacter sp. NAS-14.1]
gi|83845135|gb|EAP83015.1| ribosomal protein L25 [Sulfitobacter sp. EE-36]
Length = 215
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 15/192 (7%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R G + + R+ G VP IVF GG+ + + + KL+ L F
Sbjct: 10 AFERTGTGKGAARQARRDGMVPGIVF-------GGDLDPLPINLD-FNKLLTKLRAGRFK 61
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ LF+L+V + E VRV+ R V H D P +V +R + + + +
Sbjct: 62 ATLFNLKVEGQ-------EDVRVICRDVQRHVVKDLPTHVDLMRLKRTTKINLFIQVEVE 114
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G++VSPGL+KGG L ++ V+ + A +P +I +D+SEL++ + +K+ K
Sbjct: 115 GEEVSPGLKKGGVLTLVRPEVELVVTAGDIPDHITIDVSELEIGDSLTISSVKLPNGTKP 174
Query: 236 LRSKDEPVCKIA 247
+ +D + +I+
Sbjct: 175 VIDRDFVIAQIS 186
>gi|395788365|ref|ZP_10467929.1| 50S ribosomal protein L25 [Bartonella birtlesii LL-WM9]
gi|395408282|gb|EJF74893.1| 50S ribosomal protein L25 [Bartonella birtlesii LL-WM9]
Length = 208
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 56/89 (62%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
EK+ VLP+ L D PL+V FLR ++++++++P+ F +D +PGL+KGG LN ++
Sbjct: 71 EKIMVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ PA+ +P I++DLS + I
Sbjct: 131 HEIECTAPANAIPEAIEIDLSSYSIGDSI 159
>gi|398354514|ref|YP_006399978.1| 50S ribosomal protein L25 [Sinorhizobium fredii USDA 257]
gi|390129840|gb|AFL53221.1| 50S ribosomal protein L25 [Sinorhizobium fredii USDA 257]
Length = 204
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 93/182 (51%), Gaps = 23/182 (12%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I + T ++ + H G F++ + L+V E
Sbjct: 24 RRNGLIPAVIY--------GDKQAPLSIVLSTKEVTMKI-HAGG--FMTTVATLDVNGE- 71
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K+RVLP+ L D ++V FLR + + + VP+ F ++ SPGL++GG
Sbjct: 72 -------KIRVLPKDYQLDPVRDFTMHVDFLRVSKGSQVSVQVPVHFENEEKSPGLKQGG 124
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALKLLRSKDEPVCKI 246
LN ++ V+ AD +P ++ VDLS L + + D+K+ A ++ +D V I
Sbjct: 125 TLNIVRHEVELNVSADNIPEFLTVDLSGLKIGDTVHISDVKLPAGATPVIADRDFTVATI 184
Query: 247 AG 248
AG
Sbjct: 185 AG 186
>gi|91978462|ref|YP_571121.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodopseudomonas palustris BisB5]
gi|123721572|sp|Q131L9.1|RL25_RHOPS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91684918|gb|ABE41220.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisB5]
Length = 234
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 95 ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLN 154
ISV+ ++R + GR F++ +FD+ + + K RV+PR HL D P++
Sbjct: 43 ISVEDKELRLRI-LAGR--FLTTVFDVVLDGK--------KHRVIPRDYHLDPVKDFPIH 91
Query: 155 VTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
V FLR A +++ VPL +G + +PG+++GG N + TV PA+ +P +I+ D+S
Sbjct: 92 VDFLRLGAGATIRVSVPLHLKGLESAPGVKRGGTFNIVTHTVDLEAPAESIPQFIEADVS 151
Query: 215 ELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA 247
LD+ + D+ + +K + +D + I
Sbjct: 152 TLDIGVSLHLSDIALPNGVKSVSREDVTLVTIV 184
>gi|395790756|ref|ZP_10470215.1| 50S ribosomal protein L25 [Bartonella alsatica IBS 382]
gi|395409052|gb|EJF75651.1| 50S ribosomal protein L25 [Bartonella alsatica IBS 382]
Length = 208
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 56/89 (62%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
EK+ VLP+ L D PL+V FLR ++++++++P+ F +D +PGL+KGG LN ++
Sbjct: 71 EKIMVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ PA+ +P I++DLS + I
Sbjct: 131 HEIECTAPANAIPEAIEIDLSSYSIGDSI 159
>gi|296114646|ref|ZP_06833299.1| 50S ribosomal protein L25/general stress protein Ctc
[Gluconacetobacter hansenii ATCC 23769]
gi|295979002|gb|EFG85727.1| 50S ribosomal protein L25/general stress protein Ctc
[Gluconacetobacter hansenii ATCC 23769]
Length = 206
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+AG VP +++ GG + + + + R + L + + SR++D+ +
Sbjct: 24 RRAGLVPGVIY-------GGKQEAVLIALDP-RIVARELHKPGWRSRIYDISI------- 68
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
D + L R++ LH +D PL+V + R + ++V + F G++VSPG+++GG LN
Sbjct: 69 DGSKTEHALLREIQLHPVSDVPLHVDYQRLAEGQKVHVEVSITFTGEEVSPGIKRGGVLN 128
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
++ TV + +P DLS+LD+ + DLK
Sbjct: 129 IVRHTVDVVADPANMPEGFSADLSKLDIHDNVRWEDLK 166
>gi|357385214|ref|YP_004899938.1| 50S ribosomal protein L25 [Pelagibacterium halotolerans B2]
gi|351593851|gb|AEQ52188.1| LSU ribosomal protein L25p [Pelagibacterium halotolerans B2]
Length = 209
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 82/151 (54%), Gaps = 22/151 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQT---NQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G VP++++ G K +S+ + RK+ H G F+S + +++V
Sbjct: 22 RRQGLVPAVIY-------GDKKAPLSIAISYKDTFRKI--HDGG--FLSHVIEIDV---- 66
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
GD K RV+P+ L D ++V FLR + L ++VP+ F + SPGL+KGG
Sbjct: 67 -DGD---KHRVIPKDYQLEPVRDFLVHVDFLRVGKNSTLTVEVPVHFENQEKSPGLKKGG 122
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDV 218
LN ++ TV+ PAD +P Y+ VDLS+ +V
Sbjct: 123 VLNVVRHTVEVTVPADSIPEYLVVDLSKSEV 153
>gi|218463175|ref|ZP_03503266.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli Kim 5]
Length = 202
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 80/147 (54%), Gaps = 22/147 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + +EV +
Sbjct: 25 RRNGFIPAVIY--------GDKQAPIAIALNTNEVTKRI-HAGG--FMTTVATIEVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D ++V FLR + +++P+ F ++ S GL+ GG
Sbjct: 73 -------KYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSQGLKVGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLS 214
LN ++ +V+ CPAD +P + D+DLS
Sbjct: 126 VLNIVRHSVEVHCPADAIPEFFDIDLS 152
>gi|148559338|ref|YP_001259412.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ovis
ATCC 25840]
gi|148370595|gb|ABQ60574.1| ribosomal protein L25, Ctc-form [Brucella ovis ATCC 25840]
Length = 233
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G++P++++ G+K+ +++ + S F + + +EV +
Sbjct: 50 RRNGQIPAVIY--------GDKQEPLAIAVSYKEIFYKIHGSGFKTTVATIEVDGK---- 97
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
K++VLP+ L D P +V FLR ++++ ++VP+ F+ ++ +PG+++GG LN
Sbjct: 98 ----KIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVLN 153
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALKLLRSKDEPVCKIAG 248
++ V+ + PA+ +P +++DLS L++ + +K+ A ++ +D + IA
Sbjct: 154 VVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDFTIATIAA 212
>gi|414163818|ref|ZP_11420065.1| 50S ribosomal protein L25 [Afipia felis ATCC 53690]
gi|410881598|gb|EKS29438.1| 50S ribosomal protein L25 [Afipia felis ATCC 53690]
Length = 232
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 88/165 (53%), Gaps = 16/165 (9%)
Query: 76 VPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEK 135
VP++++ G NK +++ + + L + F++ LF++++ + K
Sbjct: 29 VPAVIY-------GDNKPPVTISLDD-KALRQSIFAGHFLTTLFNIDLDGQ--------K 72
Query: 136 VRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRT 195
RV+PR L D PL+V FLR A +++ VPL +G +VSPG+++GG +N + T
Sbjct: 73 HRVIPRDYALDPVKDFPLHVDFLRLGEGATIRVSVPLHVKGAEVSPGVKRGGTVNIVNHT 132
Query: 196 VKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKD 240
V+ + +P +I+VD+S+L++ + D+ + +K + D
Sbjct: 133 VELEADVEHIPQFIEVDVSKLEINNSLHISDVALPKGVKPVSRDD 177
>gi|395781885|ref|ZP_10462295.1| 50S ribosomal protein L25 [Bartonella rattimassiliensis 15908]
gi|395420327|gb|EJF86608.1| 50S ribosomal protein L25 [Bartonella rattimassiliensis 15908]
Length = 206
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K+ VLP+ L D PL+V FLR ++ +++++P+ F +D++PGL+KGG LN ++
Sbjct: 71 QKIMVLPKDYQLDPVRDFPLHVDFLRISEKSFVEVNIPVRFLNEDIAPGLKKGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK-LLRSKDEPVCKIAG 248
++ PA+ +P I++DLS + I +++ + +++ +D + IA
Sbjct: 131 HEIECTAPANAIPEAIEIDLSSYSIGDSIHISAVQLPKGVTPIIQDRDFTIATIAA 186
>gi|383640040|ref|ZP_09952446.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
elodea ATCC 31461]
Length = 199
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 30/171 (17%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR---LISVQTNQIRKLV--G 107
T+ A R G S R+ GRVP++++ GNK+ I V +++KL+ G
Sbjct: 6 TLSAETRDRAGKGASRALRREGRVPAVIY--------GNKQDPASIHVNERELQKLLNTG 57
Query: 108 HLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLK 167
H F S ++ R L + V TD PL+V FLR A +
Sbjct: 58 HF-----------------FNSVIMVNGERTLAKDVAFDVVTDRPLHVDFLRISEHATVH 100
Query: 168 IDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDV 218
++VP+VF ++++PGL++GG LN ++ ++ + A +P I++ L L+V
Sbjct: 101 VEVPIVFVDEELAPGLKRGGVLNIVRHELELVVDAAEIPEQIEISLKGLEV 151
>gi|395779604|ref|ZP_10460073.1| 50S ribosomal protein L25 [Bartonella washoensis 085-0475]
gi|395419979|gb|EJF86264.1| 50S ribosomal protein L25 [Bartonella washoensis 085-0475]
Length = 208
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K+ VLP+ L D PL+V FLR ++++++++P+ F +D +PGL+KGG LN ++
Sbjct: 71 QKITVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK-LLRSKDEPVCKIAGGRAS 252
++ PA+ +P I++DLS + I +++ ++ +++ +D + IA
Sbjct: 131 HEIECTAPANAIPEAIEIDLSSYSIGDSIHISAVQLPEGVEPVIQDRDFTIATIAAPAGM 190
Query: 253 D 253
D
Sbjct: 191 D 191
>gi|188581655|ref|YP_001925100.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium populi BJ001]
gi|226736337|sp|B1Z970.1|RL25_METPB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|179345153|gb|ACB80565.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium populi BJ001]
Length = 228
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 21/181 (11%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHL 109
+T+ A+ R G + R+ G++P++++ GGN+ I+V + R L+
Sbjct: 5 KTLEAVARDRVGKGAARAVRRQGQIPAVIY-------GGNQAPEAIAVDLIRTRTLIYAG 57
Query: 110 GRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
G F + LFD+ V + K R +PR L + PL+V FLR + +D
Sbjct: 58 G---FKTTLFDITVGGK--------KTRAIPRDYQLDPVSGVPLHVDFLRVVSGQTVTVD 106
Query: 170 VPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
VP+ F D+ +PG++ KGG LN TV D +P I+VDL+ ++ I A DL+
Sbjct: 107 VPVHFVNDEKAPGIKQKGGTLNVALHTVSLDVAPDQIPDAIEVDLTGREIGDVIHASDLR 166
Query: 229 V 229
+
Sbjct: 167 L 167
>gi|339319516|ref|YP_004679211.1| 50S ribosomal protein L25 [Candidatus Midichloria mitochondrii
IricVA]
gi|338225641|gb|AEI88525.1| ribosomal protein L25 [Candidatus Midichloria mitochondrii IricVA]
Length = 202
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 18/199 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R S G + R+ R+P+I++ G ++S+ K + SRL
Sbjct: 12 RESEGKGAARALRRNDRIPAILY------GGKEDVMLSLVAKDFFK---EYSKGNIQSRL 62
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
+L + ++ K+ +PR V ++ TD P ++ F + +K+ V + DD
Sbjct: 63 VELHLGNK--------KITAIPRDVQINPVTDFPEHIDFQEVGKDTEIKVAVHVRIINDD 114
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
PG++KGG +N +RT+ F C +P IDVD++ L+V Q + DL++ ++ +
Sbjct: 115 KCPGIKKGGVMNVAQRTINFYCHPSSIPSSIDVDVANLEVGQNLHINDLQLPTGVRPVDP 174
Query: 239 KDEPVCKIAGGRASDQKKS 257
+ + I+ GRA +++ S
Sbjct: 175 HNFAILSIS-GRAEEKEAS 192
>gi|154246548|ref|YP_001417506.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthobacter
autotrophicus Py2]
gi|226694603|sp|A7IIK6.1|RL25_XANP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|154160633|gb|ABS67849.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xanthobacter
autotrophicus Py2]
Length = 203
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 20/161 (12%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLV--GHLGRSF 113
A+ R G + ER+AGRVP++++ ++ IS+ +I K + GH
Sbjct: 9 AVARPRAGKGAARAERRAGRVPAVIYGEKQ-----EPVTISLNFREINKTIYAGH----- 58
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F++ LF+++V K RV+PR L D PL+V FLR A + ++VP+
Sbjct: 59 FLTTLFEIDVDGT--------KHRVIPRDYQLDVVKDFPLHVDFLRVSQGATVTVEVPVH 110
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
F + SP L+ GG LN + V+ CPA+ +P ++VDL+
Sbjct: 111 FLNQEASPALKAGGTLNVVAHAVELECPAESIPASVEVDLT 151
>gi|222086595|ref|YP_002545129.1| 50S ribosomal protein L25 [Agrobacterium radiobacter K84]
gi|398381726|ref|ZP_10539832.1| ribosomal protein L25, Ctc-form [Rhizobium sp. AP16]
gi|221724043|gb|ACM27199.1| ribosomal protein L25, Ctc-form [Agrobacterium radiobacter K84]
gi|397718807|gb|EJK79388.1| ribosomal protein L25, Ctc-form [Rhizobium sp. AP16]
Length = 203
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%), Gaps = 22/149 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + ++V
Sbjct: 25 RRNGLIPAVIY--------GDKQAPISITLNTNEVTKRI-HAGG--FLTTIATIDVDGT- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K++VLP+ L D L++ FLR + + +++P+ F + SPGL+ GG
Sbjct: 73 -------KIKVLPKDYQLDPVRDFTLHIDFLRVSGNSQVTVEIPVHFVNQEKSPGLKAGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSEL 216
LN ++ V+ CPAD +P + VDLS L
Sbjct: 126 VLNIVRHEVEVHCPADAIPEFFTVDLSGL 154
>gi|417110749|ref|ZP_11963810.1| 50S ribosomal protein L25 [Rhizobium etli CNPAF512]
gi|327188360|gb|EGE55577.1| 50S ribosomal protein L25 [Rhizobium etli CNPAF512]
Length = 203
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 22/147 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + +EV +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPIAIALNTNEVTKRI-HAGG--FMTTVATIEVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D ++V FLR + +++P+ F + SPGL+ GG
Sbjct: 73 -------KYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVSVEIPVHFINEAKSPGLKVGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLS 214
LN ++ V+ CPAD +P + D+DLS
Sbjct: 126 VLNIVRHEVEVHCPADAIPEFFDIDLS 152
>gi|49473974|ref|YP_032016.1| 50S ribosomal protein L25 [Bartonella quintana str. Toulouse]
gi|71153120|sp|Q6G0F8.1|RL25_BARQU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|49239477|emb|CAF25829.1| 50s ribosomal protein l25 [Bartonella quintana str. Toulouse]
Length = 208
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 56/89 (62%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K+ VLP+ L D P++V FLR ++++++ +P+ F +D +PGL+KGG LN ++
Sbjct: 71 QKIMVLPKDYQLDPVRDFPIHVDFLRVSAQSVVEVSIPVHFFNEDTAPGLKKGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ + PA+ +P I++DLS + I
Sbjct: 131 HEIECIAPANAIPEAIEIDLSNYSIGDSI 159
>gi|239832418|ref|ZP_04680747.1| ribosomal protein L25, Ctc-form [Ochrobactrum intermedium LMG 3301]
gi|239824685|gb|EEQ96253.1| ribosomal protein L25, Ctc-form [Ochrobactrum intermedium LMG 3301]
Length = 277
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 102/196 (52%), Gaps = 29/196 (14%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFV 115
R G S + R+ G++P++++ G+K+ I+V +I + G F
Sbjct: 81 RTRVGKGSSRELRRNGQIPAVIY--------GDKQEPLAIAVSYKEIFYKIHGGG---FK 129
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + +EV + K++VLP+ L D P +V FLR ++++ ++VP+ F+
Sbjct: 130 TTVATIEVDGK--------KIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFK 181
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK----VHP 231
++ +PG+++GG LN ++ V+ + PA+ +P +DVDL+ L++ + +K V P
Sbjct: 182 NEEAAPGIKRGGVLNIVRHDVELIVPANAIPEALDVDLTGLEIGDSVHISAIKLPKGVTP 241
Query: 232 ALKLLRSKDEPVCKIA 247
A++ +D + IA
Sbjct: 242 AIQ---DRDFTIATIA 254
>gi|148554297|ref|YP_001261879.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
wittichii RW1]
gi|166223725|sp|A5V625.1|RL25_SPHWW RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|148499487|gb|ABQ67741.1| LSU ribosomal protein L25P [Sphingomonas wittichii RW1]
Length = 207
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 16/167 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R G S R+ GRVP++++ ++ I V+ + KL+ H G F
Sbjct: 9 AEARERAGKGASRAIRREGRVPAVIYGEKQ-----EPASIHVEEKVLMKLL-HTGHFFNS 62
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ D+ + KVR LP+ V H TD PL+V FLR + ++VP+ F+
Sbjct: 63 VVMLDVGGK----------KVRTLPKDVQFHPVTDRPLHVDFLRIGEHTKVNVNVPVHFK 112
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
+++SPGL++GG LN + + A +P I + L L+V + I
Sbjct: 113 DEELSPGLKRGGVLNVVIHDLGLSVDAAEIPEEIVISLKGLEVGESI 159
>gi|304391297|ref|ZP_07373241.1| ribosomal protein L25, Ctc-form [Ahrensia sp. R2A130]
gi|303296653|gb|EFL91009.1| ribosomal protein L25, Ctc-form [Ahrensia sp. R2A130]
Length = 227
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQT-NQIRKLVGHL 109
D T+ A R G + + R+ VP++++ G K +S+ + L H
Sbjct: 4 DNTLTAQARDRVGKGAARELRRNNMVPAVIY-------GDKKDPLSIALPRKETTLAIHA 56
Query: 110 GRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
G F++ L D+EV + K +VLP+ LH +D ++V LR + + ++
Sbjct: 57 GG--FMTTLLDIEVDGK--------KHKVLPKDYQLHPVSDVVMHVDLLRVSAKTAVTVE 106
Query: 170 VPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDV 218
+P+VF ++ GL+ GG LN ++ TV+ CPA+ +P ++DL+ D+
Sbjct: 107 IPVVFLNEEECIGLKAGGTLNVVRFTVEVNCPANSIPDNFEIDLTSYDI 155
>gi|399036824|ref|ZP_10733788.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF122]
gi|398065651|gb|EJL57272.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF122]
Length = 204
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 22/160 (13%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + +EV +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPISIALSTNEVTKRI-HAGG--FMTTIATIEVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D ++V FLR + +++P+ F ++ S GL+ GG
Sbjct: 73 -------KYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFVNEEKSQGLKAGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
LN ++ ++ CPAD +P + +VDLS + I DL
Sbjct: 126 VLNIVRHEIEVQCPADAIPEFFNVDLSGKKIGDSIHISDL 165
>gi|444312219|ref|ZP_21147812.1| 50S ribosomal protein L25/general stress protein Ctc [Ochrobactrum
intermedium M86]
gi|443484471|gb|ELT47280.1| 50S ribosomal protein L25/general stress protein Ctc [Ochrobactrum
intermedium M86]
Length = 208
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 102/197 (51%), Gaps = 29/197 (14%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFV 115
R G S + R+ G++P++++ G+K+ I+V +I + G F
Sbjct: 12 RTRVGKGSSRELRRNGQIPAVIY--------GDKQEPLAIAVSYKEIFYKIHGGG---FK 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + +EV + K++VLP+ L D P +V FLR ++++ ++VP+ F+
Sbjct: 61 TTVATIEVDGK--------KIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFK 112
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK----VHP 231
++ +PG+++GG LN ++ V+ + PA+ +P +DVDL+ L++ + +K V P
Sbjct: 113 NEEAAPGIKRGGVLNIVRHDVELIVPANAIPEALDVDLTGLEIGDSVHISAIKLPKGVTP 172
Query: 232 ALKLLRSKDEPVCKIAG 248
A++ +D + IA
Sbjct: 173 AIQ---DRDFTIATIAA 186
>gi|409402261|ref|ZP_11251851.1| 50S ribosomal protein L25/general stress protein Ctc [Acidocella
sp. MX-AZ02]
gi|409129121|gb|EKM98988.1| 50S ribosomal protein L25/general stress protein Ctc [Acidocella
sp. MX-AZ02]
Length = 245
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 16/177 (9%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGR 111
E I A R+ G V+ R+ G+VP++++ G ++ S+ R ++ L R
Sbjct: 33 ELIEASARSRAGKGVARATRREGKVPAVIY--------GARQEPSLIALDPRTVMKELKR 84
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
+ SRL++++V K R L R V H TD P +V F R +K+ V
Sbjct: 85 GGWRSRLYEIDVAGT--------KTRALMRDVSFHPVTDQPEHVDFQRLVAGEPVKVAVA 136
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
+ F + SPGL++GG LN ++ V+ + AD +P ++DL +LD+ + DL+
Sbjct: 137 VHFLNEATSPGLKRGGVLNVVRHKVEVVVDADHIPEKFEIDLGKLDINDNVRWHDLQ 193
>gi|315122138|ref|YP_004062627.1| 50S ribosomal protein L25 [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495540|gb|ADR52139.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 191
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 87/178 (48%), Gaps = 16/178 (8%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G++P+ ++ + + + I++ T I K L F++ +F +++ E
Sbjct: 25 RRNGKIPATIY-----GNISSPKSIALSTKDISK---RLYSKHFMTTIFTIDLGKE---- 72
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
+RVLP+ L +D +++ FL+ ++ + + VP+ F + SPGL+ GG LN
Sbjct: 73 ----SIRVLPKDYQLDPVSDVLIHMDFLQISEKSTISVQVPIRFINQNKSPGLKMGGSLN 128
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAG 248
I + LCPA+ +P I DL L + I D+++ + + + + KI+
Sbjct: 129 IICHEIPLLCPANKIPDSISADLDGLKIGDNIHMTDIRLPEGITSVSHANSTIAKISA 186
>gi|332188364|ref|ZP_08390089.1| ribosomal protein L25, Ctc-form [Sphingomonas sp. S17]
gi|332011593|gb|EGI53673.1| ribosomal protein L25, Ctc-form [Sphingomonas sp. S17]
Length = 205
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G S R+ GRVP++++ G NK S+ + + LV L
Sbjct: 6 TLAAETRDQVGKGASRSLRREGRVPAVIY-------GQNKAAASIHLEE-KALVKALMTG 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F F S +++ R L + V H TD PL+V FLR + + VP+
Sbjct: 58 HF------------FTSVIMVDGQRTLAKDVAFHPVTDRPLHVDFLRIGEHETVTVAVPV 105
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
VF +D S G+++GG LN + ++ + A +P I + L L+V I D+K+
Sbjct: 106 VFTDEDESRGIKQGGVLNVTRHEIEIVVDAADIPAEITISLKGLEVGDSIHISDVKL 162
>gi|423712324|ref|ZP_17686626.1| 50S ribosomal protein L25 [Bartonella washoensis Sb944nv]
gi|395412198|gb|EJF78707.1| 50S ribosomal protein L25 [Bartonella washoensis Sb944nv]
Length = 208
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 56/89 (62%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K+ VLP+ L D PL+V FLR ++++++++P+ F +D +PGL+KGG LN ++
Sbjct: 71 QKITVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ PA+ +P I++DLS + I
Sbjct: 131 HEIECTAPANAIPEAIEIDLSSYSIGDSI 159
>gi|163867941|ref|YP_001609145.1| 50S ribosomal protein L25 [Bartonella tribocorum CIP 105476]
gi|189042346|sp|A9IR85.1|RL25_BART1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|161017592|emb|CAK01150.1| 50S ribosomal protein L25 [Bartonella tribocorum CIP 105476]
Length = 209
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 56/89 (62%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K+ VLP+ L D PL+V FLR ++++++++P+ F +D +PGL+KGG LN ++
Sbjct: 71 QKIMVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ PA+ +P I++DLS + I
Sbjct: 131 HEIECTAPANAIPEAIEIDLSSYSIGDSI 159
>gi|338730626|ref|YP_004660018.1| 50S ribosomal protein L25P [Thermotoga thermarum DSM 5069]
gi|335364977|gb|AEH50922.1| LSU ribosomal protein L25P [Thermotoga thermarum DSM 5069]
Length = 215
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISV--QTNQIRKLVGHLGR 111
I A R G R + RK G +P +V+ G + I++ + NQ +KLVG +
Sbjct: 3 IKAAVREVTGKRPVRRLRKQGFIPGVVY-------GPDVEPINIVLEANQFKKLVGKISE 55
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
S + + + E ++E V +KV + TD L++ F + +KI++P
Sbjct: 56 SVPIKLVLEREGKTEV--------FDVFMKKVQIDKVTDEILHIDFYKPAAGRTMKINIP 107
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
+ G + G+ KGG L ++ + V YI+VD+S LDV + GDLK+
Sbjct: 108 VKIVGKAI--GVEKGGILEVMRNEIPVETLPTAVLEYIEVDVSNLDVGDSLHVGDLKLPE 165
Query: 232 ALKLLRSKDEPVCKIAGGRASDQKKS 257
+K L SKDE V + +++ S
Sbjct: 166 GMKTLLSKDEVVVTVLSPAGEEEETS 191
>gi|218682558|ref|ZP_03530159.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli CIAT 894]
Length = 201
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 25/185 (13%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + +EV +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPIAIALNTNEVTKRI-HAGG--FMTTVATIEVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D ++V FLR + +++P+ F ++ SPG++ GG
Sbjct: 73 -------KFKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSPGIKVGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI- 246
LN ++ V+ CPAD +P + +VDL+ + I ++ + + + +D + I
Sbjct: 126 VLNIVRHEVEVHCPADAIPEFFNVDLNGKKIGDSIHISEVTLPKGVTTVIDRDFTIATII 185
Query: 247 --AGG 249
AGG
Sbjct: 186 APAGG 190
>gi|338708195|ref|YP_004662396.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
gi|336294999|gb|AEI38106.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
Length = 211
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
+LA R G S R+ G VP++++ G +++ +I L L
Sbjct: 6 NLLAKKRDRAGKGASRAIRREGLVPAVIY-------GDKTPAVAITVEEI-ALFKMLNTG 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F++ + L V + K+ LP+ V H TD L+V FLR +++++ +P+
Sbjct: 58 HFMNSVVTLTVDGK--------KIPTLPKDVQFHPVTDRALHVDFLRVSATSMIEVAIPV 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
+ ++ SPG+++GG LN I +K A +P I+V + L+V I LK+
Sbjct: 110 SYVDEEKSPGIKRGGVLNIIHHELKLKVKATDIPEQIEVSVEGLEVGDSIHINQLKLPAG 169
Query: 233 LKLLRSKDEPVC 244
++L + EP
Sbjct: 170 VELAHDEHEPTV 181
>gi|86282729|gb|ABC91792.1| 50S ribosomal protein L25 [Rhizobium etli CFN 42]
Length = 233
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 22/147 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + +EV +
Sbjct: 54 RRNGLIPAVIY--------GDKQAPIAIAINTNEVTKRI-HAGG--FMTTVATIEVDGK- 101
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D L+V FLR + +++P+ F + SPGL+ GG
Sbjct: 102 -------KHKVLPKDYQLDPVRDFTLHVDFLRVSGNTQVTVEIPVHFINEAKSPGLKVGG 154
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLS 214
LN ++ V+ CPAD +P + ++DLS
Sbjct: 155 VLNIVRHEVEVHCPADAIPEFFNIDLS 181
>gi|415906029|ref|ZP_11552650.1| 50S ribosomal subunit protein L25 [Herbaspirillum frisingense
GSF30]
gi|407763203|gb|EKF71905.1| 50S ribosomal subunit protein L25 [Herbaspirillum frisingense
GSF30]
Length = 202
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 17/177 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A PR GT S + R+AG+ P IV+ GG +++ + L L +
Sbjct: 3 VIAFPRNEQGTGASRRLRRAGQTPGIVY-------GGTAAPLNIAVDH-NALYHALKKET 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLE+ + +VL R +H+ L+V F R L VPL
Sbjct: 55 FHSSILDLEIDGKVE--------QVLLRDFQVHAFKQLVLHVDFQRVDASQKLHTKVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F +VSP ++ G ++ + + C +P +I+VDLS+LDV Q I DLK+
Sbjct: 107 FVNAEVSPAVKLHAGIISHVAAELDVTCLPKNLPEFIEVDLSKLDVGQSIHLADLKL 163
>gi|409407694|ref|ZP_11256145.1| large subunit ribosomal protein L25 [Herbaspirillum sp. GW103]
gi|386433445|gb|EIJ46271.1| large subunit ribosomal protein L25 [Herbaspirillum sp. GW103]
Length = 202
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 17/177 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A PR GT S + R+AG+ P IV+ GG ++ + L L +
Sbjct: 3 VIAFPRNEQGTGASRRLRRAGQTPGIVY-------GGTAAPTNIAVDH-NALYHALKKET 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLE+ + +VL R +H+ L+V F R L VPL
Sbjct: 55 FHSSILDLEIDGKVE--------QVLLRDFQVHAFKQLVLHVDFQRVDASQKLHTKVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F +VSP ++ GG ++ + + C +P +I+VDL++LDV Q I DLK+
Sbjct: 107 FVNAEVSPAVKLHGGIISHVAAELDVTCLPKNLPEFIEVDLAKLDVGQSIHLADLKL 163
>gi|325187175|emb|CCA21716.1| 50S ribosomal protein L25 putative [Albugo laibachii Nc14]
gi|325187320|emb|CCA21859.1| 50S ribosomal protein L25 putative [Albugo laibachii Nc14]
Length = 258
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 89/169 (52%), Gaps = 19/169 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGN-KRLISVQTNQIRKLVGHLGRSFFVS- 116
R G+R + K RK G +P +++ + G +G + K L+S++ +KL L R + S
Sbjct: 44 RTQDGSRAARKLRKKGYLPGLLYGE--GMNGDDTKVLVSLE----KKLFDRLHRKLWTSI 97
Query: 117 --RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVF 174
++F ++V+ + + + R V H TD PL V F+R K+ +P+ +
Sbjct: 98 DNQVFKVQVKDQ-------PPILAIMRDVQFHPVTDIPLTVNFIRYKNGR--KVSIPITY 148
Query: 175 RGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKIL 223
++ SPG+++GGY+N I V+ + VP +++D++ LDV+ K
Sbjct: 149 INEEGSPGIKRGGYINHIYHEVECYINTEQVPKTLEIDVNGLDVDSKFF 197
>gi|225627977|ref|ZP_03786013.1| ribosomal protein L25, Ctc-form [Brucella ceti str. Cudo]
gi|237815928|ref|ZP_04594925.1| ribosomal protein L25, Ctc-form [Brucella abortus str. 2308 A]
gi|294852853|ref|ZP_06793526.1| large subunit ribosomal protein L25 [Brucella sp. NVSL 07-0026]
gi|297248806|ref|ZP_06932524.1| large subunit ribosomal protein L25 [Brucella abortus bv. 5 str.
B3196]
gi|17982392|gb|AAL51662.1| lsu ribosomal protein l25p [Brucella melitensis bv. 1 str. 16M]
gi|225617140|gb|EEH14186.1| ribosomal protein L25, Ctc-form [Brucella ceti str. Cudo]
gi|237789226|gb|EEP63437.1| ribosomal protein L25, Ctc-form [Brucella abortus str. 2308 A]
gi|294821442|gb|EFG38441.1| large subunit ribosomal protein L25 [Brucella sp. NVSL 07-0026]
gi|297175975|gb|EFH35322.1| large subunit ribosomal protein L25 [Brucella abortus bv. 5 str.
B3196]
Length = 233
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 70/115 (60%), Gaps = 1/115 (0%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K++VLP+ L D P +V FLR ++++ ++VP+ F+ ++ +PG+++GG LN ++
Sbjct: 97 KKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVLNVVR 156
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALKLLRSKDEPVCKIA 247
V+ + PA+ +P +++DLS L++ + +K+ A ++ +D + IA
Sbjct: 157 HDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDFTIATIA 211
>gi|161619480|ref|YP_001593367.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
canis ATCC 23365]
gi|260565969|ref|ZP_05836439.1| ribosomal protein L25 [Brucella suis bv. 4 str. 40]
gi|261755482|ref|ZP_05999191.1| 50S ribosomal protein L25 [Brucella suis bv. 3 str. 686]
gi|376275852|ref|YP_005116291.1| 50S ribosomal protein L25 [Brucella canis HSK A52141]
gi|189042347|sp|A9M6K0.1|RL25_BRUC2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|161336291|gb|ABX62596.1| ribosomal protein L25, Ctc-form [Brucella canis ATCC 23365]
gi|260155487|gb|EEW90567.1| ribosomal protein L25 [Brucella suis bv. 4 str. 40]
gi|261745235|gb|EEY33161.1| 50S ribosomal protein L25 [Brucella suis bv. 3 str. 686]
gi|363404419|gb|AEW14714.1| 50S ribosomal protein L25 [Brucella canis HSK A52141]
Length = 207
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 97/181 (53%), Gaps = 23/181 (12%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G++P++++ G+K+ I+V +I + G F + + +EV +
Sbjct: 24 RRNGQIPAVIY--------GDKQEPLAIAVSYKEIFYKIHGGG---FKTTVATIEVDGK- 71
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K++VLP+ L D P +V FLR ++++ ++VP+ F+ ++ +PG+++GG
Sbjct: 72 -------KIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGG 124
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALKLLRSKDEPVCKI 246
LN ++ V+ + PA+ +P +++DLS L++ + +K+ A ++ +D + I
Sbjct: 125 VLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDFTIATI 184
Query: 247 A 247
A
Sbjct: 185 A 185
>gi|374577976|ref|ZP_09651072.1| ribosomal protein L25, Ctc-form [Bradyrhizobium sp. WSM471]
gi|374426297|gb|EHR05830.1| ribosomal protein L25, Ctc-form [Bradyrhizobium sp. WSM471]
Length = 239
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 76 VPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEK 135
VP +++ G N+ +++ + R+L + F++ L D+++ K
Sbjct: 29 VPGVIY-------GNNQPPLTISVDD-RELRSRILAGRFLTTLVDIDLEGN--------K 72
Query: 136 VRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRT 195
RV+PR HL D P++V F+R A ++I VPL + SPG+++GG +N +
Sbjct: 73 HRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKAEGSPGVKRGGAVNIVAHA 132
Query: 196 VKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
++ C + +P +I+ D+ L++ + D+K+ +K L ++D + I
Sbjct: 133 IELECGVENIPQFIEADVGSLEIGHSLHLSDIKLPAGVKALTAEDATLVTI 183
>gi|225181558|ref|ZP_03735000.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dethiobacter
alkaliphilus AHT 1]
gi|225167806|gb|EEG76615.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dethiobacter
alkaliphilus AHT 1]
Length = 214
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 25/201 (12%)
Query: 54 ILAIPRASPGTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
+ A+PR T+ +KE R +G VP IV+ Q+D + I+V + + ++ L +
Sbjct: 6 VQAVPREKV-TKSQLKELRNSGMVPGIVYGQKD-----DAVAIAVDS---KDIISILQSA 56
Query: 113 FFVSRLFDLEVRSEFGS---GDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
+ L DL V + +L+E + + R H V FLR + L++
Sbjct: 57 AGTNSLVDLAVEGNKETVIIKELVEDIFIQDRFTH----------VDFLRISLKDKLEVQ 106
Query: 170 VPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
VP++F GD V G+++GG L + R V C +P I++D+S L V + + GDL V
Sbjct: 107 VPVIFTGDAV--GVKEGGTLQPLLREVSLKCLPTEIPESIELDISNLSVGETLTVGDLTV 164
Query: 230 HPALKLLRSKDEPVCKIAGGR 250
+ +LL DE V +A R
Sbjct: 165 PASAELLNEADEAVVSVAAPR 185
>gi|414175243|ref|ZP_11429647.1| 50S ribosomal protein L25 [Afipia broomeae ATCC 49717]
gi|410889072|gb|EKS36875.1| 50S ribosomal protein L25 [Afipia broomeae ATCC 49717]
Length = 241
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F++ + D+E+ + K RV+PR L D PL+V FLR + +++ VPL
Sbjct: 59 FLTTIHDIELDGK--------KHRVIPRDFSLDPVRDFPLHVDFLRLGEGSKIRVSVPLH 110
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
+ SPG+++GG +N + + PAD +P Y++ D+ +LD+ + D+K+ +
Sbjct: 111 VLNSETSPGVKRGGTVNIVTHNIDLEVPADNIPQYLEADVGKLDIGSSLHITDIKLPNGV 170
Query: 234 KLLRSKDEPVCKIA 247
KL +D + I
Sbjct: 171 KLFTREDATLVTIV 184
>gi|395765972|ref|ZP_10446562.1| 50S ribosomal protein L25 [Bartonella sp. DB5-6]
gi|395410707|gb|EJF77259.1| 50S ribosomal protein L25 [Bartonella sp. DB5-6]
Length = 208
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 57/89 (64%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K+ VLP+ L D PL+V FLR ++++++++P+ F ++ +PGL+KGG LN ++
Sbjct: 71 QKITVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEETAPGLKKGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ + PA+ +P I++DLS + I
Sbjct: 131 HEIECIAPANAIPEAIEIDLSSYSIGDSI 159
>gi|170750343|ref|YP_001756603.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium radiotolerans JCM 2831]
gi|226736338|sp|B1LZ78.1|RL25_METRJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|170656865|gb|ACB25920.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium radiotolerans JCM 2831]
Length = 227
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHL 109
+T+ A+ R G + R+ G++P++++ GG + + I+V + R L+
Sbjct: 5 KTLEAVARDRVGKGAARAVRRQGQIPAVIY-------GGGQPPQSIAVDLIRTRTLIYAG 57
Query: 110 GRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
G F + LF++ + KVR +PR L T PL+V FLR + ++
Sbjct: 58 G---FKTTLFEINAGGK--------KVRAIPRDFQLDPVTGVPLHVDFLRVVSGQTVTVE 106
Query: 170 VPLVFRGDDVSPGLRK-GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
VP+ F +D +PG++K GG LN + T+ D +P I+VDL+ + I D+K
Sbjct: 107 VPVHFVNEDAAPGIKKLGGTLNIVAHTLSLEVAPDQIPDAIEVDLTGRAIGDVIHVSDIK 166
Query: 229 VHPALKLLRSKDEPVCKI 246
+ PA +PV I
Sbjct: 167 I-PAGTYTGEATDPVANI 183
>gi|15892855|ref|NP_360569.1| 50S ribosomal protein L25 [Rickettsia conorii str. Malish 7]
gi|71153165|sp|Q92H40.1|RL25_RICCN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|15620041|gb|AAL03470.1| 50S ribosomal protein L25 [Rickettsia conorii str. Malish 7]
Length = 203
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT + R+AGRVP+I++ G K +S+ + +++ + + F+
Sbjct: 9 AESRTEFGTGAARALRRAGRVPAIIY-------GAGKTPVSISLEE-KEITKYYRKPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S+L +L + + K +VLP+ V LH TD +V F+ E K++VP+V+
Sbjct: 61 SQLINLTIDKK--------KYKVLPKAVELHPVTDIVRHVDFVFLE-EKTQKMEVPVVYE 111
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G + + G+++GGY N +KR V LC + +P + +D++ + + + + +++
Sbjct: 112 GKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSF 171
Query: 236 LRSKDEPVCKIAGGRAS 252
+ +K+ + I G R +
Sbjct: 172 VTNKEFVLATIIGRRGA 188
>gi|162329634|ref|YP_470519.2| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli CFN 42]
gi|109893385|sp|Q2K5U4.2|RL25_RHIEC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
Length = 204
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 22/147 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + +EV +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPIAIAINTNEVTKRI-HAGG--FMTTVATIEVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D L+V FLR + +++P+ F + SPGL+ GG
Sbjct: 73 -------KHKVLPKDYQLDPVRDFTLHVDFLRVSGNTQVTVEIPVHFINEAKSPGLKVGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLS 214
LN ++ V+ CPAD +P + ++DLS
Sbjct: 126 VLNIVRHEVEVHCPADAIPEFFNIDLS 152
>gi|325293585|ref|YP_004279449.1| 50S ribosomal protein L25 [Agrobacterium sp. H13-3]
gi|325061438|gb|ADY65129.1| 50S ribosomal protein L25/general stress protein CTC [Agrobacterium
sp. H13-3]
Length = 203
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 86/162 (53%), Gaps = 23/162 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G + D++ +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPISIALSTNEVTKRI-HAGGFMTTVAVIDVDGK--- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K++VLP+ L D ++V FLR L+ ++VP+ F ++ S ++ GG
Sbjct: 73 -------KIKVLPKDYQLDPVRDFTMHVDFLRVSGNTLVNVEVPVHFENEEKSE-IKIGG 124
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
LN ++ TV+F CPA+ +P +I VDLS L + + ++K+
Sbjct: 125 VLNIVRHTVEFHCPANDIPEFITVDLSGLKIGDSVHISNVKL 166
>gi|23502403|ref|NP_698530.1| 50S ribosomal protein L25 [Brucella suis 1330]
gi|62290420|ref|YP_222213.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. 9-941]
gi|82700343|ref|YP_414917.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
melitensis biovar Abortus 2308]
gi|161511157|ref|NP_539398.2| 50S ribosomal protein L25 [Brucella melitensis bv. 1 str. 16M]
gi|163843791|ref|YP_001628195.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis
ATCC 23445]
gi|189024649|ref|YP_001935417.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
abortus S19]
gi|225853014|ref|YP_002733247.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
melitensis ATCC 23457]
gi|256263507|ref|ZP_05466039.1| 50S ribosomal protein L25 [Brucella melitensis bv. 2 str. 63/9]
gi|256369951|ref|YP_003107462.1| 50S ribosomal protein L25 [Brucella microti CCM 4915]
gi|260546956|ref|ZP_05822695.1| ribosomal protein L25 [Brucella abortus NCTC 8038]
gi|260565243|ref|ZP_05835727.1| ribosomal protein L25 [Brucella melitensis bv. 1 str. 16M]
gi|260755253|ref|ZP_05867601.1| 50S ribosomal protein L25 [Brucella abortus bv. 6 str. 870]
gi|260758474|ref|ZP_05870822.1| 50S ribosomal protein L25 [Brucella abortus bv. 4 str. 292]
gi|260762299|ref|ZP_05874642.1| 50S ribosomal protein L25 [Brucella abortus bv. 2 str. 86/8/59]
gi|260884268|ref|ZP_05895882.1| 50S ribosomal protein L25 [Brucella abortus bv. 9 str. C68]
gi|261214517|ref|ZP_05928798.1| 50S ribosomal protein L25 [Brucella abortus bv. 3 str. Tulya]
gi|261222673|ref|ZP_05936954.1| 50S ribosomal protein L25 [Brucella ceti B1/94]
gi|261315706|ref|ZP_05954903.1| 50S ribosomal protein L25 [Brucella pinnipedialis M163/99/10]
gi|261318144|ref|ZP_05957341.1| 50S ribosomal protein L25 [Brucella pinnipedialis B2/94]
gi|261325595|ref|ZP_05964792.1| 50S ribosomal protein L25 [Brucella neotomae 5K33]
gi|261752824|ref|ZP_05996533.1| 50S ribosomal protein L25 [Brucella suis bv. 5 str. 513]
gi|261758713|ref|ZP_06002422.1| ribosomal protein L25 [Brucella sp. F5/99]
gi|265989175|ref|ZP_06101732.1| 50S ribosomal protein L25 [Brucella pinnipedialis M292/94/1]
gi|265991589|ref|ZP_06104146.1| 50S ribosomal protein L25 [Brucella melitensis bv. 1 str. Rev.1]
gi|265995427|ref|ZP_06107984.1| 50S ribosomal protein L25 [Brucella melitensis bv. 3 str. Ether]
gi|265998637|ref|ZP_06111194.1| 50S ribosomal protein L25 [Brucella ceti M490/95/1]
gi|306843118|ref|ZP_07475740.1| ribosomal protein L25, Ctc-form [Brucella sp. BO2]
gi|306844535|ref|ZP_07477124.1| ribosomal protein L25, Ctc-form [Brucella inopinata BO1]
gi|340791143|ref|YP_004756608.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
pinnipedialis B2/94]
gi|376272734|ref|YP_005151312.1| 50S ribosomal protein L25 [Brucella abortus A13334]
gi|376281195|ref|YP_005155201.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis
VBI22]
gi|384211896|ref|YP_005600978.1| 50S ribosomal protein L25 [Brucella melitensis M5-90]
gi|384225189|ref|YP_005616353.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis
1330]
gi|384409006|ref|YP_005597627.1| 50S ribosomal protein25 [Brucella melitensis M28]
gi|384445567|ref|YP_005604286.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
melitensis NI]
gi|423166403|ref|ZP_17153106.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI435a]
gi|423171222|ref|ZP_17157897.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI474]
gi|423172696|ref|ZP_17159367.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI486]
gi|423178611|ref|ZP_17165255.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI488]
gi|423180653|ref|ZP_17167294.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI010]
gi|423183784|ref|ZP_17170421.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI016]
gi|423185276|ref|ZP_17171890.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI021]
gi|423188411|ref|ZP_17175021.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI259]
gi|68053010|sp|Q57BY2.1|RL25_BRUAB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|68053226|sp|Q8YIG3.2|RL25_BRUME RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71153128|sp|Q8FZE8.1|RL25_BRUSU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|109893347|sp|Q2YLX6.1|RL25_BRUA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189042348|sp|B0CHX4.1|RL25_BRUSI RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736287|sp|B2S6Z6.1|RL25_BRUA1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|254801037|sp|C0REH1.1|RL25_BRUMB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|23348389|gb|AAN30445.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brucella suis
1330]
gi|62196552|gb|AAX74852.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brucella
abortus bv. 1 str. 9-941]
gi|82616444|emb|CAJ11507.1| Ribosomal protein L25 [Brucella melitensis biovar Abortus 2308]
gi|163674514|gb|ABY38625.1| ribosomal protein L25, Ctc-form [Brucella suis ATCC 23445]
gi|189020221|gb|ACD72943.1| Ribosomal protein L25 [Brucella abortus S19]
gi|225641379|gb|ACO01293.1| ribosomal protein L25, Ctc-form [Brucella melitensis ATCC 23457]
gi|256000114|gb|ACU48513.1| 50S ribosomal protein L25 [Brucella microti CCM 4915]
gi|260096006|gb|EEW79883.1| ribosomal protein L25 [Brucella abortus NCTC 8038]
gi|260151311|gb|EEW86405.1| ribosomal protein L25 [Brucella melitensis bv. 1 str. 16M]
gi|260668792|gb|EEX55732.1| 50S ribosomal protein L25 [Brucella abortus bv. 4 str. 292]
gi|260672731|gb|EEX59552.1| 50S ribosomal protein L25 [Brucella abortus bv. 2 str. 86/8/59]
gi|260675361|gb|EEX62182.1| 50S ribosomal protein L25 [Brucella abortus bv. 6 str. 870]
gi|260873796|gb|EEX80865.1| 50S ribosomal protein L25 [Brucella abortus bv. 9 str. C68]
gi|260916124|gb|EEX82985.1| 50S ribosomal protein L25 [Brucella abortus bv. 3 str. Tulya]
gi|260921257|gb|EEX87910.1| 50S ribosomal protein L25 [Brucella ceti B1/94]
gi|261297367|gb|EEY00864.1| 50S ribosomal protein L25 [Brucella pinnipedialis B2/94]
gi|261301575|gb|EEY05072.1| 50S ribosomal protein L25 [Brucella neotomae 5K33]
gi|261304732|gb|EEY08229.1| 50S ribosomal protein L25 [Brucella pinnipedialis M163/99/10]
gi|261738697|gb|EEY26693.1| ribosomal protein L25 [Brucella sp. F5/99]
gi|261742577|gb|EEY30503.1| 50S ribosomal protein L25 [Brucella suis bv. 5 str. 513]
gi|262553261|gb|EEZ09095.1| 50S ribosomal protein L25 [Brucella ceti M490/95/1]
gi|262766540|gb|EEZ12329.1| 50S ribosomal protein L25 [Brucella melitensis bv. 3 str. Ether]
gi|263002373|gb|EEZ14948.1| 50S ribosomal protein L25 [Brucella melitensis bv. 1 str. Rev.1]
gi|263093528|gb|EEZ17562.1| 50S ribosomal protein L25 [Brucella melitensis bv. 2 str. 63/9]
gi|264661372|gb|EEZ31633.1| 50S ribosomal protein L25 [Brucella pinnipedialis M292/94/1]
gi|306275146|gb|EFM56902.1| ribosomal protein L25, Ctc-form [Brucella inopinata BO1]
gi|306286723|gb|EFM58276.1| ribosomal protein L25, Ctc-form [Brucella sp. BO2]
gi|326409553|gb|ADZ66618.1| Ribosomal protein L25 [Brucella melitensis M28]
gi|326539259|gb|ADZ87474.1| ribosomal protein L25, Ctc-form [Brucella melitensis M5-90]
gi|340559602|gb|AEK54840.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
pinnipedialis B2/94]
gi|343383369|gb|AEM18861.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis
1330]
gi|349743556|gb|AEQ09099.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
melitensis NI]
gi|358258794|gb|AEU06529.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis
VBI22]
gi|363400340|gb|AEW17310.1| large subunit ribosomal protein L25 [Brucella abortus A13334]
gi|374538556|gb|EHR10064.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI474]
gi|374543887|gb|EHR15365.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI435a]
gi|374544215|gb|EHR15692.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI486]
gi|374545392|gb|EHR16855.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI488]
gi|374548184|gb|EHR19636.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI010]
gi|374548612|gb|EHR20060.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI016]
gi|374558973|gb|EHR30362.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI259]
gi|374559986|gb|EHR31369.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI021]
Length = 207
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 101/194 (52%), Gaps = 23/194 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFV 115
R G S + R+ G++P++++ G+K+ I+V +I + G F
Sbjct: 12 RTRVGKGSSRELRRNGQIPAVIY--------GDKQEPLAIAVSYKEIFYKIHGGG---FK 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + +EV + K++VLP+ L D P +V FLR ++++ ++VP+ F+
Sbjct: 61 TTVATIEVDGK--------KIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFK 112
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALK 234
++ +PG+++GG LN ++ V+ + PA+ +P +++DLS L++ + +K+ A
Sbjct: 113 NEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATP 172
Query: 235 LLRSKDEPVCKIAG 248
++ +D + IA
Sbjct: 173 AIQDRDFTIATIAA 186
>gi|115523456|ref|YP_780367.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodopseudomonas palustris BisA53]
gi|122297068|sp|Q07RP7.1|RL25_RHOP5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|115517403|gb|ABJ05387.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisA53]
Length = 234
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 97/186 (52%), Gaps = 16/186 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R S G + ER+AGRVP++++ G NK +++ R+L + F+
Sbjct: 9 ATARPSVGKGAARAERRAGRVPAVIY-------GDNKPPVTISLED-RELRLRILAGRFL 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + DL++ K RV+PR HL D P++V FLR A +++ VPL +
Sbjct: 61 TTVVDLDLDGT--------KHRVIPRDFHLDPVRDFPVHVDFLRLGEGATIRVSVPLHLK 112
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
+ +PG+++GG +N + TV AD +P +I+ D+ LD+ + D+ + +KL
Sbjct: 113 NSETAPGVKRGGTVNIVTHTVDLEAEADSIPQFIEADIGTLDIGTSLHLSDVVLPKGVKL 172
Query: 236 LRSKDE 241
+ ++++
Sbjct: 173 VAARED 178
>gi|229586949|ref|YP_002845450.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
africae ESF-5]
gi|379019404|ref|YP_005295638.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Hlp#2]
gi|379712673|ref|YP_005301012.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
philipii str. 364D]
gi|259646695|sp|C3PP47.1|RL25_RICAE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|228021999|gb|ACP53707.1| 50S ribosomal protein L25 [Rickettsia africae ESF-5]
gi|376329318|gb|AFB26555.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
philipii str. 364D]
gi|376331984|gb|AFB29218.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Hlp#2]
Length = 203
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 100/197 (50%), Gaps = 17/197 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT + R+AGRVP+I++ G K +S+ + +++ + + F+
Sbjct: 9 AESRTEFGTGAARALRRAGRVPAIIY-------GAGKTPVSISLEE-KEITKYYRKPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S+L +L + + K +VLP+ V LH TD +V F+ E K++VP+V+
Sbjct: 61 SQLINLTIDKK--------KYKVLPKAVELHPVTDIVRHVDFVFLE-EKTQKMEVPVVYE 111
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G + + G+++GGY N +KR V LC + +P I +D++ + + + + +++
Sbjct: 112 GKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNITIDVTNMPMATSLKSSKIELPKGCSF 171
Query: 236 LRSKDEPVCKIAGGRAS 252
+ K+ + I G R +
Sbjct: 172 VTKKEFVLATIIGRRGA 188
>gi|418407211|ref|ZP_12980529.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens 5A]
gi|358006355|gb|EHJ98679.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens 5A]
Length = 203
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 86/162 (53%), Gaps = 23/162 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G + D++ +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPISIALSTNEVTKRI-HAGGFMTTVAVIDVDGK--- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K++VLP+ L D ++V FLR L+ ++VP+ F ++ S ++ GG
Sbjct: 73 -------KIKVLPKDYQLDPVRDFTMHVDFLRVSGNTLVNVEVPVHFENEEKSE-IKIGG 124
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
LN ++ TV+F CPA+ +P +I VDLS L + + ++K+
Sbjct: 125 VLNIVRHTVEFHCPANDIPEFITVDLSGLKIGDSVHISNVKL 166
>gi|302844117|ref|XP_002953599.1| hypothetical protein VOLCADRAFT_106036 [Volvox carteri f.
nagariensis]
gi|300261008|gb|EFJ45223.1| hypothetical protein VOLCADRAFT_106036 [Volvox carteri f.
nagariensis]
Length = 299
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 155 VTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
+ + P + ++ +DVP+ D+++PG+RKGG++ +KRTV++ + +PPYI+V++
Sbjct: 200 IEMIYCPVDRVVLVDVPVRLVNDEMAPGVRKGGWMCMLKRTVRYKALGNAIPPYIEVNVR 259
Query: 215 ELDVEQKILAGDLKVHPALKLL-RSKDEPVCKIA 247
LD+EQ +L DL + P K+ ++ + PV +
Sbjct: 260 HLDLEQDLLVRDLPIPPGTKIYEKNFNAPVVRCT 293
>gi|405382024|ref|ZP_11035846.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF142]
gi|397321512|gb|EJJ25928.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF142]
Length = 203
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 22/147 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + ++V +
Sbjct: 25 RRNGFIPAVIY--------GDKQAPVSIAINTNEVTKRI-HAGG--FMTTVATIDVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D ++V FLR + +++P+ F ++ SPGL+ GG
Sbjct: 73 -------KYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFVNEEKSPGLKVGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLS 214
LN ++ V+ CPAD +P + VDLS
Sbjct: 126 VLNIVRHEVEVHCPADAIPEFFTVDLS 152
>gi|49475908|ref|YP_033949.1| 50S ribosomal protein L25 [Bartonella henselae str. Houston-1]
gi|71153119|sp|Q6G2L2.1|RL25_BARHE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|49238716|emb|CAF27968.1| 50S ribosomal protein l25 [Bartonella henselae str. Houston-1]
Length = 206
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 56/89 (62%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K+ VLP+ L D PL+V FLR ++++++++P+ F +D +PGL+KGG LN ++
Sbjct: 71 QKIMVLPKDYQLDPVRDFPLHVDFLRISAKSIVEVNIPVHFLNEDSAPGLKKGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ PA+ +P I++DLS + I
Sbjct: 131 HEIECTAPANAIPEAIEIDLSSYSIGDSI 159
>gi|407798258|ref|ZP_11145166.1| hypothetical protein OCGS_0239 [Oceaniovalibus guishaninsula
JLT2003]
gi|407059694|gb|EKE45622.1| hypothetical protein OCGS_0239 [Oceaniovalibus guishaninsula
JLT2003]
Length = 226
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRS 112
I A+ R G + + R+ G VP IV+ GG L I++ N L+ HL
Sbjct: 13 IQAMERTGTGKGAARQARRDGYVPGIVY------GGGTDPLPINLPYN---ALIKHLKAG 63
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F+S LF+L+V E VRV+ R V D P +V +R + + + +P+
Sbjct: 64 RFLSTLFNLKVEGH-------EDVRVICRNVQRDVVKDLPTHVDLMRLRRTSRVNLFIPV 116
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDV 218
G++ SPGL+KGG L ++ V+ C A +P I D+S++D+
Sbjct: 117 ELTGEEQSPGLKKGGVLTMVRPEVELRCTAGDIPEKIVGDVSQMDI 162
>gi|407773385|ref|ZP_11120686.1| 50S ribosomal protein L25/general stress protein Ctc [Thalassospira
profundimaris WP0211]
gi|407283849|gb|EKF09377.1| 50S ribosomal protein L25/general stress protein Ctc [Thalassospira
profundimaris WP0211]
Length = 209
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 19/191 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G +V R+AG VP +++ G + + Q + R L L + F S +
Sbjct: 13 RAGKGAARAV--RRAGMVPGVIY-------GAKQEAVLFQVDP-RPLWKLLHQPGFYSHV 62
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
++V E K VLPR V +D L+V FLR + ++VP+ F ++
Sbjct: 63 LTVQVGKE--------KYEVLPRDVQFDKVSDEILHVDFLRFAKGQTINVEVPVRFVNEE 114
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL-LR 237
SPGL+KGG LN ++ V+ LC +P + DL+ ++V I +K+ ++L +
Sbjct: 115 KSPGLKKGGVLNIVRHDVEVLCAPSAIPEELVFDLTGVEVGDSIHISAIKLPKGVELTIT 174
Query: 238 SKDEPVCKIAG 248
+D V +A
Sbjct: 175 DRDFTVATVAA 185
>gi|390952362|ref|YP_006416121.1| 50S ribosomal protein L25 [Thiocystis violascens DSM 198]
gi|390428931|gb|AFL75996.1| ribosomal protein L25, Ctc-form [Thiocystis violascens DSM 198]
Length = 202
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 18/200 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A PRA G S + R+ G VP+IV+ G H +ISV N++ K HL
Sbjct: 7 VIAQPRALSGKGASRRLRRTGLVPAIVY----GAHL-EPEMISVSHNELLK---HLEHEA 58
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DL++ GD+ KV + + + H L+V F+R + L++ VP+
Sbjct: 59 FYSHVLDLKI------GDVASKVVL--KDMQRHPAKPFILHVDFMRVSQDEKLRMMVPIH 110
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
F ++ S G++ GG + V+ +C +P +I +DL E+++ + +L++ +
Sbjct: 111 FLNEEKSKGVKIGGQASHKITEVEVICLPKDLPEFIAIDLLEMEIGDIVHLSELQMPSGV 170
Query: 234 KLLRS--KDEPVCKIAGGRA 251
L DEPV I G R
Sbjct: 171 VLAHQPDPDEPVVVIHGARG 190
>gi|389876166|ref|YP_006369731.1| 50S ribosomal protein L25/general stress protein Ctc [Tistrella
mobilis KA081020-065]
gi|388526950|gb|AFK52147.1| 50S ribosomal protein L25/general stress protein Ctc [Tistrella
mobilis KA081020-065]
Length = 204
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 29/174 (16%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF-- 113
A R G + + R+ G VP +++ GG Q ++V R F
Sbjct: 9 ATARDRGGKGAARQARRDGLVPGVIY-------GGK---------QPAQMVSFNAREFGL 52
Query: 114 FVSRLFDL-----EVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
F +R DL EV+ + E +RVL R V LH TD PL+V LR + +++
Sbjct: 53 FFNRTPDLASTVIEVKLDG------ESIRVLARDVQLHPVTDVPLHVDLLRLTGDHEIRV 106
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
+V + F + PG++KGG LN ++ V+ +C D +P I VDL+ + I
Sbjct: 107 EVAVHFVNEATCPGIKKGGVLNVVRHEVEMICAPDAIPQSITVDLANAQIGDSI 160
>gi|265984577|ref|ZP_06097312.1| 50S ribosomal protein L25 [Brucella sp. 83/13]
gi|306837764|ref|ZP_07470630.1| ribosomal protein L25, Ctc-form [Brucella sp. NF 2653]
gi|264663169|gb|EEZ33430.1| 50S ribosomal protein L25 [Brucella sp. 83/13]
gi|306407149|gb|EFM63362.1| ribosomal protein L25, Ctc-form [Brucella sp. NF 2653]
Length = 207
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 89/163 (54%), Gaps = 22/163 (13%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFV 115
R G S + R+ G++P++++ G+K+ I+V +I + G F
Sbjct: 12 RTRVGKGSSRELRRNGQIPAVIY--------GDKQEPLAIAVSYKEIFYKIHGGG---FK 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + +EV + K++VLP+ L D P +V FLR ++++ ++VP+ F+
Sbjct: 61 TTVATIEVDGK--------KIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFK 112
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDV 218
++ +PG+++GG LN ++ V+ + PA+ +P +++DLS L++
Sbjct: 113 NEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEI 155
>gi|299068047|emb|CBJ39261.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum CMR15]
Length = 206
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 19/178 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R+ GT S + R AG+ P+I++ G +LI + N + L +
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPAIIYGA-----GAEPKLIELDHNALYHA---LKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + D+EV + +EK L R LH L+V F R + + VPL
Sbjct: 55 FHSSILDIEVAGK------VEKA--LLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLH 106
Query: 174 FRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
F + +PG++ G G +N I V+ C PAD+ P +I+VDL L++ Q + DLK+
Sbjct: 107 FLNQETAPGVKLGHGIVNHILNDVEVSCLPADL-PEFIEVDLGNLEIGQTLHISDLKL 163
>gi|121602891|ref|YP_989277.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
bacilliformis KC583]
gi|421761080|ref|ZP_16197885.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
bacilliformis INS]
gi|166223664|sp|A1UTH4.1|RL25_BARBK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|120615068|gb|ABM45669.1| ribosomal protein L25, Ctc-form [Bartonella bacilliformis KC583]
gi|411173490|gb|EKS43534.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
bacilliformis INS]
Length = 205
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 55/89 (61%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
EK++VLP+ L D P++V FLR ++++ +++P+ F +D +PG+++GG LN ++
Sbjct: 71 EKIQVLPKDYQLDPVRDFPMHVDFLRVSAKSIVHVNIPVHFLNEDTAPGIKRGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ PA+ +P I +DLS + I
Sbjct: 131 HEIECTAPANAIPDAIQIDLSSYSIGDSI 159
>gi|395778447|ref|ZP_10458959.1| 50S ribosomal protein L25 [Bartonella elizabethae Re6043vi]
gi|423715242|ref|ZP_17689466.1| 50S ribosomal protein L25 [Bartonella elizabethae F9251]
gi|395417655|gb|EJF83992.1| 50S ribosomal protein L25 [Bartonella elizabethae Re6043vi]
gi|395430078|gb|EJF96129.1| 50S ribosomal protein L25 [Bartonella elizabethae F9251]
Length = 209
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 56/89 (62%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K+ VLP+ L D PL+V FLR ++++++++P+ F +D +PG++KGG LN ++
Sbjct: 71 QKIMVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGIKKGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ PA+ +P I++DLS + I
Sbjct: 131 HEIECTAPANAIPEAIEIDLSSYSIGDSI 159
>gi|238650660|ref|YP_002916512.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
peacockii str. Rustic]
gi|374319541|ref|YP_005066040.1| 50S ribosomal protein L25 [Rickettsia slovaca 13-B]
gi|383484256|ref|YP_005393169.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
parkeri str. Portsmouth]
gi|383751567|ref|YP_005426668.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
slovaca str. D-CWPP]
gi|259646696|sp|C4K1L3.1|RL25_RICPU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|238624758|gb|ACR47464.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
peacockii str. Rustic]
gi|360042090|gb|AEV92472.1| 50S ribosomal protein L25 [Rickettsia slovaca 13-B]
gi|378936610|gb|AFC75110.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
parkeri str. Portsmouth]
gi|379774581|gb|AFD19937.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
slovaca str. D-CWPP]
Length = 203
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 17/197 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT + R+AGRVP+I++ G K +S+ + +++ + + F+
Sbjct: 9 AESRTEFGTGAARALRRAGRVPAIIY-------GAGKTPVSISLEE-KEITKYYRKPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S+L +L + + K +VLP+ V LH TD +V F+ E K++VP+V+
Sbjct: 61 SQLINLTIDKK--------KYKVLPKAVELHPVTDIVRHVDFVFLE-EKTQKMEVPVVYE 111
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G + + G+++GGY N +KR V LC + +P + +D++ + + + + +++
Sbjct: 112 GKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSF 171
Query: 236 LRSKDEPVCKIAGGRAS 252
+ K+ + I G R +
Sbjct: 172 VTKKEFVLATIIGRRGA 188
>gi|241205729|ref|YP_002976825.1| 50S ribosomal protein L25 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240859619|gb|ACS57286.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 202
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 80/147 (54%), Gaps = 22/147 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + ++V +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPIAIALNTNEVTKRI-HAGG--FMTTVATIDVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D ++V FLR + +++P+ F ++ SPGL+ GG
Sbjct: 73 -------KHKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSPGLKVGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLS 214
LN ++ V+ CPAD +P + ++DLS
Sbjct: 126 VLNIVRHEVEVHCPADAIPEFFNIDLS 152
>gi|395793134|ref|ZP_10472539.1| 50S ribosomal protein L25 [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|395431448|gb|EJF97466.1| 50S ribosomal protein L25 [Bartonella vinsonii subsp. arupensis
Pm136co]
Length = 208
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 56/89 (62%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K+ VLP+ L D PL+V FLR ++++++++P+ F +D +PGL+KGG LN ++
Sbjct: 71 QKITVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ PA+ +P I++DL+ + I
Sbjct: 131 HEIECTAPANAIPEAIEIDLASYSIGDSI 159
>gi|409438366|ref|ZP_11265445.1| 50S ribosomal protein L25 [Rhizobium mesoamericanum STM3625]
gi|408749917|emb|CCM76616.1| 50S ribosomal protein L25 [Rhizobium mesoamericanum STM3625]
Length = 204
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 22/162 (13%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + +EV +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPISIALSTNEVTKRI-HAGG--FMTTIATIEVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D ++V FLR + +++P+ F ++ S GL+ GG
Sbjct: 73 -------KYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSQGLKAGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
LN ++ ++ CPAD +P + +VDL+ + I DL +
Sbjct: 126 VLNIVRHEIEVHCPADAIPEFFNVDLNGKKIGDSIHISDLTM 167
>gi|451942267|ref|YP_007462904.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
gi|451901654|gb|AGF76116.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
Length = 208
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 56/89 (62%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K+ VLP+ L D PL+V FLR ++++++++P+ F +D +PGL+KGG LN ++
Sbjct: 71 QKITVLPKDYQLDPVRDFPLHVDFLRISEKSVVEVNIPVHFLNEDTAPGLKKGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ PA+ +P I++DL+ + I
Sbjct: 131 HEIECTAPANAIPEAIEIDLASYSIGDSI 159
>gi|116253213|ref|YP_769051.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
leguminosarum bv. viciae 3841]
gi|424882645|ref|ZP_18306277.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WU95]
gi|115257861|emb|CAK08959.1| putative 50S ribosomal protein L25 [Rhizobium leguminosarum bv.
viciae 3841]
gi|392519008|gb|EIW43740.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 202
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 80/147 (54%), Gaps = 22/147 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + ++V +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPIAIALNTNEVTKRI-HAGG--FMTTVATIDVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D ++V FLR + +++P+ F ++ SPGL+ GG
Sbjct: 73 -------KHKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSPGLKVGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLS 214
LN ++ V+ CPAD +P + ++DLS
Sbjct: 126 VLNIVRHEVEVHCPADAIPEFFNIDLS 152
>gi|209550344|ref|YP_002282261.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|424918709|ref|ZP_18342073.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|209536100|gb|ACI56035.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|392854885|gb|EJB07406.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 202
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 22/147 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + +EV +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPISIALNTNEVTKRI-HAGG--FMTTVATIEVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D ++V FLR + +++P+ F ++ S GL+ GG
Sbjct: 73 -------KYKVLPKDYQLDPVRDFTMHVDFLRVSANTQVTVEIPVHFINEEKSQGLKVGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLS 214
LN ++ V+ CPAD +P + +VDLS
Sbjct: 126 VLNIVRHEVEVHCPADAIPEFFNVDLS 152
>gi|57238823|ref|YP_179959.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia
ruminantium str. Welgevonden]
gi|68053024|sp|Q5FFA2.2|RL25_EHRRG RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|68053028|sp|Q5HC84.1|RL25_EHRRW RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|57160902|emb|CAH57807.1| putative 50S ribosomal protein L25 [Ehrlichia ruminantium str.
Welgevonden]
Length = 208
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 51 DETILAIP---RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVG 107
D+TI+ + R S GT S R+ G +P++V+ G ++ +S+ + R+ +
Sbjct: 3 DQTIVKMNAELRNSVGTGPSRTLRRNGAIPAVVY-------GKHRSPLSIYLSD-REFLS 54
Query: 108 HLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLK 167
+ + L +LE+ + K VL R + H TD +V F +K
Sbjct: 55 KYRSAALSTHLIELEIGEK--------KEYVLMRDIQKHPVTDRIQHVDFQFIDHGTEIK 106
Query: 168 IDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
I+VPLVF + G++KGG LN + RT+ C + + I+VDL+ L + I DL
Sbjct: 107 IEVPLVFVNEQRCVGVKKGGVLNILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDL 166
Query: 228 KVHPALKLLRSKDEPVCKIAGGRASDQKKS 257
+ + ++ + P G +SDQ S
Sbjct: 167 NLPSEVTVVMKEHNPTLVTISGTSSDQDTS 196
>gi|379713618|ref|YP_005301956.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
massiliae str. AZT80]
gi|383481815|ref|YP_005390730.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rhipicephali str. 3-7-female6-CWPP]
gi|376334264|gb|AFB31496.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
massiliae str. AZT80]
gi|378934154|gb|AFC72657.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rhipicephali str. 3-7-female6-CWPP]
Length = 203
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 99/194 (51%), Gaps = 17/194 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R GT + R+AGRVP+I++ G K +S+ + +++ + + F+S+L
Sbjct: 12 RTEFGTGAARALRRAGRVPAIIY-------GAGKIPVSISLEE-KEITKYYRKPAFISQL 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
+L + + K +VLP+ V LH TD +V F+ E K++VP+V+ G +
Sbjct: 64 INLTIDKK--------KYKVLPKAVELHPVTDIVRHVDFVFLE-EKTQKMEVPVVYEGKE 114
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
+ G+++GGY N +KR V LC + +P + +D++ + + + + +++ +
Sbjct: 115 RALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFVTK 174
Query: 239 KDEPVCKIAGGRAS 252
K+ + I G R +
Sbjct: 175 KEFVLATIIGRRGA 188
>gi|157964747|ref|YP_001499571.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
massiliae MTU5]
gi|157844523|gb|ABV85024.1| 50S ribosomal protein L25 [Rickettsia massiliae MTU5]
Length = 211
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 99/194 (51%), Gaps = 17/194 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R GT + R+AGRVP+I++ G K +S+ + +++ + + F+S+L
Sbjct: 20 RTEFGTGAARALRRAGRVPAIIY-------GAGKIPVSISLEE-KEITKYYRKPAFISQL 71
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
+L + + K +VLP+ V LH TD +V F+ E K++VP+V+ G +
Sbjct: 72 INLTIDKK--------KYKVLPKAVELHPVTDIVRHVDFVFLE-EKTQKMEVPVVYEGKE 122
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
+ G+++GGY N +KR V LC + +P + +D++ + + + + +++ +
Sbjct: 123 RALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFVTK 182
Query: 239 KDEPVCKIAGGRAS 252
K+ + I G R +
Sbjct: 183 KEFVLATIIGRRGA 196
>gi|114569308|ref|YP_755988.1| 50S ribosomal protein L25 [Maricaulis maris MCS10]
gi|122316567|sp|Q0ARN7.1|RL25_MARMM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|114339770|gb|ABI65050.1| LSU ribosomal protein L25P [Maricaulis maris MCS10]
Length = 215
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 25/198 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISV--QTNQIRK--LVGHLGRSFF 114
R G + R+ VP IV+ GG +SV + N+IRK L GH F
Sbjct: 12 REGTGKGAARAARREDLVPGIVY-------GGKLDPVSVTLRGNEIRKALLGGH-----F 59
Query: 115 VSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVF 174
+S + +++ + + + V+ R + H +D +++ R + + ++V + F
Sbjct: 60 LSNMIEIDHKGK--------RQTVIARDIQFHPVSDKAMHIDLYRVDEDTKINVNVAVNF 111
Query: 175 RGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPAL 233
+D P L++GG LN ++ V+ LCPA +P ++ DL+ LD+ + +K+ +
Sbjct: 112 TNEDACPALKRGGVLNIVRHDVELLCPAGSIPESVEADLTGLDIGDSLHISAIKLPKGVV 171
Query: 234 KLLRSKDEPVCKIAGGRA 251
+ +D V + G RA
Sbjct: 172 PTITDRDFTVATLQGSRA 189
>gi|423713671|ref|ZP_17687931.1| 50S ribosomal protein L25 [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395422142|gb|EJF88358.1| 50S ribosomal protein L25 [Bartonella vinsonii subsp. arupensis
OK-94-513]
Length = 208
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 56/89 (62%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K+ VLP+ L D PL+V FLR ++++++++P+ F +D +PGL+KGG LN ++
Sbjct: 71 QKITVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ PA+ +P I++DL+ + I
Sbjct: 131 HEIECTAPANAIPEAIEIDLASYSIGDSI 159
>gi|307944188|ref|ZP_07659529.1| ribosomal protein L25, Ctc-form [Roseibium sp. TrichSKD4]
gi|307772534|gb|EFO31754.1| ribosomal protein L25, Ctc-form [Roseibium sp. TrichSKD4]
Length = 207
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 77/148 (52%), Gaps = 16/148 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P++++ G+K+ T +++ L + F++ + +++ E
Sbjct: 24 RREGLLPAVIY--------GDKKPAQPITIPVKETTLTLHKGGFLTHIGTIDIDGE---- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
K +V+ + LH D L+V FLR L +D+P+ F ++ PGL+KGG LN
Sbjct: 72 ----KHQVIAKDYQLHPVRDDVLHVDFLRVSKNTTLTVDIPVTFINEETCPGLKKGGMLN 127
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDV 218
++ TV+ PA+ +P + DL+++D+
Sbjct: 128 VVRHTVELQVPANAIPETLVFDLAKVDI 155
>gi|424885426|ref|ZP_18309037.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393177188|gb|EJC77229.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 202
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 22/147 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + +EV +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPIAIALNTNEVTKRI-HAGG--FMTTVATIEVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D ++V FLR + + +P+ F +D S GL+ GG
Sbjct: 73 -------KYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVAIPVHFINEDKSQGLKVGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLS 214
LN ++ V+ CPAD +P + +VDLS
Sbjct: 126 VLNIVRHEVEVHCPADAIPEFFNVDLS 152
>gi|17545113|ref|NP_518515.1| 50S ribosomal protein L25 [Ralstonia solanacearum GMI1000]
gi|71153161|sp|Q8Y2E2.1|RL25_RALSO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|17427404|emb|CAD13922.1| putative 50s ribosomal protein l25 (general stress protein ctc)
[Ralstonia solanacearum GMI1000]
Length = 206
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 19/178 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R+ GT S + R AG+ P+I++ G +LI + N + L +
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPAIIYGA-----GAEPKLIELDHNALYHA---LKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + D+EV + +EK L R LH L+V F R + + VPL
Sbjct: 55 FHSSILDIEVAGK------VEKA--LLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLH 106
Query: 174 FRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
F + +PG++ G G +N I V+ C PAD+ P +I+VDL L++ Q + DLK+
Sbjct: 107 FLNQETAPGVKLGHGIVNHILNDVEVSCLPADL-PEFIEVDLGNLEIGQTLHISDLKL 163
>gi|58578753|ref|YP_196965.1| 50S ribosomal protein L25 [Ehrlichia ruminantium str. Welgevonden]
gi|58616812|ref|YP_196011.1| 50S ribosomal protein L25 [Ehrlichia ruminantium str. Gardel]
gi|58416424|emb|CAI27537.1| Probable 50S ribosomal protein L25 [Ehrlichia ruminantium str.
Gardel]
gi|58417379|emb|CAI26583.1| Probable 50S ribosomal protein L25 [Ehrlichia ruminantium str.
Welgevonden]
Length = 219
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 51 DETILAIP---RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVG 107
D+TI+ + R S GT S R+ G +P++V+ G ++ +S+ + R+ +
Sbjct: 14 DQTIVKMNAELRNSVGTGPSRTLRRNGAIPAVVY-------GKHRSPLSIYLSD-REFLS 65
Query: 108 HLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLK 167
+ + L +LE+ + K VL R + H TD +V F +K
Sbjct: 66 KYRSAALSTHLIELEIGEK--------KEYVLMRDIQKHPVTDRIQHVDFQFIDHGTEIK 117
Query: 168 IDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
I+VPLVF + G++KGG LN + RT+ C + + I+VDL+ L + I DL
Sbjct: 118 IEVPLVFVNEQRCVGVKKGGVLNILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDL 177
Query: 228 KVHPALKLLRSKDEPVCKIAGGRASDQKKS 257
+ + ++ + P G +SDQ S
Sbjct: 178 NLPSEVTVVMKEHNPTLVTISGTSSDQDTS 207
>gi|34581435|ref|ZP_00142915.1| 50S ribosomal protein L25 [Rickettsia sibirica 246]
gi|28262820|gb|EAA26324.1| 50S ribosomal protein L25 [Rickettsia sibirica 246]
Length = 203
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 101/199 (50%), Gaps = 21/199 (10%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT + R+AGRVP+I++ G K +S+ + +++ + + F+
Sbjct: 9 AESRTEFGTGAARALRRAGRVPAIIY-------GAGKTPVSISLEE-KEITKYYRKPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNV--TFLRAPPEALLKIDVPLV 173
S+L +L + + K +VLP+ V LH TD +V FL A + K++VP+V
Sbjct: 61 SQLINLTIDKK--------KYKVLPKAVELHPVTDIVRHVDFVFLEAKTQ---KMEVPVV 109
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
+ G + + G+++GGY N +KR V LC + +P + +D++ + + + + +++
Sbjct: 110 YEGKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGC 169
Query: 234 KLLRSKDEPVCKIAGGRAS 252
+ K+ + I G R +
Sbjct: 170 SFVTKKEFVLATIIGRRGA 188
>gi|383482451|ref|YP_005391365.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
montanensis str. OSU 85-930]
gi|378934805|gb|AFC73306.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
montanensis str. OSU 85-930]
Length = 190
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 98/196 (50%), Gaps = 17/196 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R GT + R+AGRVP+I++ G K +S+ + +++ + + F+S+L
Sbjct: 12 RTEFGTGAARALRRAGRVPAIIY-------GAGKTPVSISLEE-KEITKYYRKPAFISQL 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
L + + K +VLP+ V LH TD +V F+ E K++VP+V+ G +
Sbjct: 64 IHLTIDKK--------KYKVLPKAVELHPVTDIVRHVDFVFLE-EKTQKMEVPVVYEGKE 114
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
+ G+++GGY N +KR V LC + +P + +D++ + + + + +++ +
Sbjct: 115 RALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFVTK 174
Query: 239 KDEPVCKIAGGRASDQ 254
K+ + I G R +
Sbjct: 175 KEFVLATIIGRRGAKN 190
>gi|424871724|ref|ZP_18295386.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393167425|gb|EJC67472.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 202
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 80/147 (54%), Gaps = 22/147 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + ++V +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPIAIALNTNEVTKRI-HAGG--FMTTVATIDVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D ++V FLR + +++P+ F ++ SPGL+ GG
Sbjct: 73 -------KHKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSPGLKVGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLS 214
LN ++ V+ CPAD +P + ++DLS
Sbjct: 126 VLNIVRHEVEVHCPADAIPEFFNIDLS 152
>gi|392950437|ref|ZP_10315992.1| 50S ribosomal protein L25P [Hydrocarboniphaga effusa AP103]
gi|392950624|ref|ZP_10316179.1| 50S ribosomal protein L25P [Hydrocarboniphaga effusa AP103]
gi|391859399|gb|EIT69927.1| 50S ribosomal protein L25P [Hydrocarboniphaga effusa AP103]
gi|391859586|gb|EIT70114.1| 50S ribosomal protein L25P [Hydrocarboniphaga effusa AP103]
Length = 224
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 21/173 (12%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLG 110
I A R++ GT S + R AG VP IV+ GG K ++ISV N++ K L
Sbjct: 6 VIEAEARSAQGTGASRRLRHAGSVPGIVY-------GGKKEPQMISVNHNELWK---QLK 55
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
F S + L V E +V+ + +H H + L++ R + L+I V
Sbjct: 56 LEAFYSAIITLNVGGE--------SEQVVLKDLHRHPVREQVLHLDLQRIQADVALRIRV 107
Query: 171 PLVFRGDDVSPGLRK-GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
PL F+G DV+PG++ GGY+ + V+ C +P ++D+S L+V + I
Sbjct: 108 PLHFKGGDVAPGVKTGGGYVEHLLNEVEVECLPKDLPEAFEIDISGLNVNESI 160
>gi|149916128|ref|ZP_01904650.1| ribosomal protein L25, Ctc-form [Roseobacter sp. AzwK-3b]
gi|149809983|gb|EDM69832.1| ribosomal protein L25, Ctc-form [Roseobacter sp. AzwK-3b]
Length = 220
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 15/192 (7%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R G + R+A VP IVF GG+ + +Q L+ L F
Sbjct: 14 AQERTGTGKGAARAVRRAHMVPGIVF-------GGDVDPLPIQI-PYNVLIKKLKEGRFK 65
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S LF+L+V + VRV+ R V D P ++ +R + + +P+ F
Sbjct: 66 STLFNLKVEGH-------DDVRVICRDVQRDVVKDLPTHLDLMRLRRTTKINLFIPVTFT 118
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G+DV+PGL+KGG L ++ ++ + A +P + VDLS +D+ + + + +
Sbjct: 119 GEDVAPGLKKGGVLTVVRNEIELVVTAGDIPEEVTVDLSGMDIGDTLTISQVTLPEGAQT 178
Query: 236 LRSKDEPVCKIA 247
+D +C I+
Sbjct: 179 TIDRDFVICNIS 190
>gi|418940709|ref|ZP_13494063.1| 50S ribosomal protein L25 [Rhizobium sp. PDO1-076]
gi|375052533|gb|EHS48946.1| 50S ribosomal protein L25 [Rhizobium sp. PDO1-076]
Length = 199
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 23/162 (14%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRS 112
A+ R G S + R+ G +P++++ G+K+ IS+ TN+I K + H G
Sbjct: 10 AVARERVGKGSSRELRRNGSIPAVIY--------GDKQAPISISINTNEITKRI-HAGG- 59
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F++ + +E+ E K++VLP+ L D +++ FLR + + + VP+
Sbjct: 60 -FMTTIAVIEINGE--------KIKVLPKDYQLDPVRDFTMHIDFLRVSANSQVSVQVPV 110
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
F +D S ++ G LN ++ V+ CPAD +P +I VDLS
Sbjct: 111 HFVNEDKS-AVKIGAVLNIVRHDVELHCPADNIPEFITVDLS 151
>gi|402489060|ref|ZP_10835864.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium sp.
CCGE 510]
gi|401812007|gb|EJT04365.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium sp.
CCGE 510]
Length = 202
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 79/147 (53%), Gaps = 22/147 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + +EV +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPIAIALNTNEVTKRI-HAGG--FMTTVATIEVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D ++V FLR + +++P+ F + SPG++ GG
Sbjct: 73 -------KYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEAKSPGIKVGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLS 214
LN ++ V+ CPAD +P + +VDL+
Sbjct: 126 VLNIVRHEVEVHCPADAIPEFFNVDLN 152
>gi|341584116|ref|YP_004764607.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
heilongjiangensis 054]
gi|340808341|gb|AEK74929.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
heilongjiangensis 054]
Length = 203
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 17/197 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT + R+AGRVP+I++ G K +S+ + +++ + + F+
Sbjct: 9 AESRTEFGTGAARALRRAGRVPAIIY-------GAGKTPVSISLEE-KEITKYYRKPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S+L +L + + K +VLP+ V LH TD +V F+ E K++VP+V+
Sbjct: 61 SQLINLTIDKK--------KYKVLPKAVDLHPVTDIVRHVDFVFLE-EKTQKMEVPVVYE 111
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G + + G+++GGY N +KR V LC + +P + +D++ + + + + +++
Sbjct: 112 GKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSF 171
Query: 236 LRSKDEPVCKIAGGRAS 252
+ K+ + I G R +
Sbjct: 172 VTKKEFVLATIIGRRGA 188
>gi|424896232|ref|ZP_18319806.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393180459|gb|EJC80498.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 202
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 22/147 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + +EV +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPIAIALNTNEVTKRI-HAGG--FMTTVATIEVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D ++V FLR + +++P+ F ++ S GL+ GG
Sbjct: 73 -------KFKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSQGLKVGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLS 214
LN ++ V+ CPAD +P + +VDLS
Sbjct: 126 VLNIVRHQVEVHCPADAIPEFFNVDLS 152
>gi|383312893|ref|YP_005365694.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Rickettsia amblyommii str. GAT-30V]
gi|378931553|gb|AFC70062.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Rickettsia amblyommii str. GAT-30V]
Length = 203
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 17/197 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT + R+AGRVP+I++ G K +S+ + +++ + + F+
Sbjct: 9 AESRTEFGTGAARALRRAGRVPAIIY-------GAGKTPVSISLEE-KEITKYYRKPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S+L +L + + K +VLP+ V LH TD +V F+ E K++VP+V+
Sbjct: 61 SQLINLTIDKK--------KYKVLPKAVELHPVTDIVRHVDFVFLG-EKNQKMEVPVVYE 111
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G + + G+++GGY N +KR V LC + +P + +D++ + + + + +++
Sbjct: 112 GKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSF 171
Query: 236 LRSKDEPVCKIAGGRAS 252
+ K+ + I G R +
Sbjct: 172 VTKKEFVLATIIGRRGA 188
>gi|157828786|ref|YP_001495028.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165933514|ref|YP_001650303.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Iowa]
gi|378721608|ref|YP_005286495.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Colombia]
gi|378722955|ref|YP_005287841.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Arizona]
gi|378724309|ref|YP_005289193.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Hauke]
gi|379016146|ref|YP_005292381.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Brazil]
gi|379018095|ref|YP_005294330.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Hino]
gi|166223715|sp|A8GSZ5.1|RL25_RICRS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189042367|sp|B0BUI7.1|RL25_RICRO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|157801267|gb|ABV76520.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165908601|gb|ABY72897.1| LSU ribosomal protein L25P [Rickettsia rickettsii str. Iowa]
gi|376324670|gb|AFB21910.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Brazil]
gi|376326632|gb|AFB23871.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Colombia]
gi|376327979|gb|AFB25217.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Arizona]
gi|376330661|gb|AFB27897.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Hino]
gi|376333324|gb|AFB30557.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Hauke]
Length = 203
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 17/197 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT + R+AGRVP+I++ G K +S+ + +++ + + F+
Sbjct: 9 AESRTEFGTGAARALRRAGRVPAIIY-------GAGKTPVSISLEE-KEITKYYRKPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S+L +L + + K +VLP+ V LH TD +V F+ + K++VP+V+
Sbjct: 61 SQLINLTIDKK--------KYKVLPKAVELHPVTDIVRHVDFVFLEKKTQ-KMEVPVVYE 111
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G + + G+++GGY N +KR V LC + +P I +D++ + + + + +++
Sbjct: 112 GKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNITIDVTNMPMATSLKSSKIELPKGCSF 171
Query: 236 LRSKDEPVCKIAGGRAS 252
+ K+ + I G R +
Sbjct: 172 VTKKEFVLATIIGRRGA 188
>gi|187927356|ref|YP_001897843.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia
pickettii 12J]
gi|241661895|ref|YP_002980255.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia
pickettii 12D]
gi|309779943|ref|ZP_07674697.1| ribosomal protein L25, Ctc-form [Ralstonia sp. 5_7_47FAA]
gi|404394538|ref|ZP_10986341.1| 50S ribosomal protein L25 [Ralstonia sp. 5_2_56FAA]
gi|226736355|sp|B2UER5.1|RL25_RALPJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|187724246|gb|ACD25411.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ralstonia
pickettii 12J]
gi|240863922|gb|ACS61583.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ralstonia
pickettii 12D]
gi|308921302|gb|EFP66945.1| ribosomal protein L25, Ctc-form [Ralstonia sp. 5_7_47FAA]
gi|348616617|gb|EGY66117.1| 50S ribosomal protein L25 [Ralstonia sp. 5_2_56FAA]
Length = 208
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 19/178 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R+ GT S + R +G+ P+I++ G +LI + N + L +
Sbjct: 3 VVAFERSVQGTGASRRLRNSGKTPAIIYGA-----GAEPKLIELDHNALYHA---LKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + D+EV + +EK L R LH L+V F R + + + VPL
Sbjct: 55 FHSSILDIEVAGK------VEKA--LLRDFQLHPFKQLVLHVDFQRVSAKEKIHVKVPLH 106
Query: 174 FRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
F + +PG++ G G +N I V+ C PAD+ P +I+VDL L++ Q + DLK+
Sbjct: 107 FLNQETAPGVKLGHGIVNHILNDVEVSCLPADL-PEFIEVDLGTLEIGQTLHIADLKL 163
>gi|240850146|ref|YP_002971539.1| 50S ribosomal protein L25 [Bartonella grahamii as4aup]
gi|240267269|gb|ACS50857.1| 50S ribosomal protein L25 [Bartonella grahamii as4aup]
Length = 209
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 55/89 (61%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K+ VLP+ L D PL+V FLR ++++++++P+ F +D +PGL+KGG LN ++
Sbjct: 71 QKIMVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ PA +P I++DL+ + I
Sbjct: 131 HEIECTAPASAIPEAIEIDLASYSIGDSI 159
>gi|78484738|ref|YP_390663.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thiomicrospira crunogena XCL-2]
gi|109893402|sp|Q31IN4.1|RL25_THICR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|78363024|gb|ABB40989.1| LSU ribosomal protein L25P [Thiomicrospira crunogena XCL-2]
Length = 193
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 19/179 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGN--KRLISVQTNQIRKLVGHLGRSFFVS 116
R G S + R AG+VP+I++ GG+ + I++++NQI + + L + S
Sbjct: 10 RTEEGKGASRRLRHAGKVPAIIY-------GGDVDAKSIALKSNQIERAL-KLDVDLYNS 61
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
+ LE G+GD + + + H T ++ F RA +A++ VPL F+G
Sbjct: 62 -VLTLE-----GAGD---AENCIIKDLQRHPATGFITHIDFQRASDKAMVTKRVPLKFKG 112
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
+ SPG++ GG ++ ++ TV+ C A +P IDVD+SEL+ + L + +KL
Sbjct: 113 KESSPGVKMGGLMSFMQTTVEVSCLAKDLPTAIDVDVSELEAGTNLRLSQLTLPKGVKL 171
>gi|406938636|gb|EKD71827.1| hypothetical protein ACD_46C00088G0003 [uncultured bacterium]
Length = 235
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 19/196 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R + G S + R+ +VP +V+ GG K +S+ T + K+ L
Sbjct: 9 IEASVRQNMGKGASRRLRREEKVPGVVY-------GGGKNAVSI-TIEHNKMSKALEIEA 60
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + L +E RV+ + V H +++ F R + L + +PL
Sbjct: 61 FYSHILTLRTGTE--------SERVILKDVQRHPFKPRIMHIDFQRVRADEKLHMHIPLH 112
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
F+G + SPG+++GG ++ I ++ C D +P YI++D+SE+ + Q + D+K+ +
Sbjct: 113 FKGGENSPGVKEGGLISHIMSDIEVSCLPDNLPEYIELDISEMALNQILHLSDIKLPKGV 172
Query: 234 K---LLRSKDEPVCKI 246
+ L D+PV I
Sbjct: 173 EIVALTHDDDKPVVSI 188
>gi|218530649|ref|YP_002421465.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium extorquens CM4]
gi|240139021|ref|YP_002963496.1| 50S ribosomal protein L25 [Methylobacterium extorquens AM1]
gi|418058619|ref|ZP_12696589.1| 50S ribosomal protein L25 [Methylobacterium extorquens DSM 13060]
gi|254801054|sp|B7KNU8.1|RL25_METC4 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|218522952|gb|ACK83537.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium extorquens CM4]
gi|240008993|gb|ACS40219.1| 50S ribosomal protein L25 (General stress protein CTC)
[Methylobacterium extorquens AM1]
gi|373567858|gb|EHP93817.1| 50S ribosomal protein L25 [Methylobacterium extorquens DSM 13060]
Length = 228
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 21/181 (11%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHL 109
+T+ A+ R G + R+ G++P++++ GGN+ + I++ + R L+
Sbjct: 5 KTLEAVARDRVGKGAARAVRRQGQIPAVIY-------GGNQAPQAIAIDLIRARTLIYAG 57
Query: 110 GRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
G F + +F+++ + K R +PR L + PL+V FLR + +D
Sbjct: 58 G---FKTTVFEIDAGGK--------KTRAIPRDYQLDPVSGVPLHVDFLRVVAGQTVTVD 106
Query: 170 VPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
VP+ F +D +PG++ KGG LN TV D +P I+VDL+ ++ I A DL+
Sbjct: 107 VPVHFVNEDQAPGIKQKGGTLNVALHTVSLEVAPDQIPDAIEVDLAGREIGDVIHASDLR 166
Query: 229 V 229
+
Sbjct: 167 L 167
>gi|110681037|ref|YP_684044.1| 50S ribosomal protein L25 [Roseobacter denitrificans OCh 114]
gi|122972523|sp|Q161I5.1|RL25_ROSDO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|109457153|gb|ABG33358.1| ribosomal protein L25, Ctc-form [Roseobacter denitrificans OCh 114]
Length = 212
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R G + + R+ G VP IVF GG+ + + L+ L
Sbjct: 8 LVAQERTGTGKGAARQARRDGMVPGIVF-------GGDVDPLPINI-PFNVLIKKLREGR 59
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S LF+++V + VRV+ R V H D P ++ F+R + + + +
Sbjct: 60 FKSTLFNMKVEGH-------DDVRVICRDVQRHVVKDLPTHIDFMRLKRTTKINLFIAVE 112
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
G+DV+PGL+KGG L I+ V+ + A +P ++ +D+SE+++ I
Sbjct: 113 VEGEDVAPGLKKGGVLTLIRPEVELIVTAGDIPDHVTIDISEMEIGDNI 161
>gi|350273733|ref|YP_004885046.1| 50S ribosomal protein L25 [Rickettsia japonica YH]
gi|348592946|dbj|BAK96907.1| 50S ribosomal protein L25 [Rickettsia japonica YH]
Length = 203
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 99/196 (50%), Gaps = 17/196 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT + R+AGRVP+I++ G K +S+ + +++ + + F+
Sbjct: 9 AESRTEFGTGAARALRRAGRVPAIIY-------GAGKTPVSISLEE-KEITKYYRKPAFI 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S+L +L + + K +VLP+ V LH TD +V F+ E K++VP+V+
Sbjct: 61 SQLINLTIDKK--------KYKVLPKAVDLHPVTDIVRHVDFVFLE-EKTQKMEVPVVYE 111
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G + + G+++GGY N +KR V LC + +P + +D++ + + + + +++
Sbjct: 112 GKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSF 171
Query: 236 LRSKDEPVCKIAGGRA 251
+ K+ + I G R
Sbjct: 172 VTKKEFVLATIIGRRG 187
>gi|418297121|ref|ZP_12908963.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens CCNWGS0286]
gi|355538219|gb|EHH07466.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens CCNWGS0286]
Length = 202
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 86/162 (53%), Gaps = 23/162 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G + D++ +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPISIALSTNEVTKRI-HAGGFMTTVAIIDVDGK--- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K++VLP+ L D ++V FLR L+ ++VP+ F ++ S ++ GG
Sbjct: 73 -------KIKVLPKDYQLDPVRDFTMHVDFLRVSGNTLVNVEVPVHFVNEEKSD-IKIGG 124
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
LN ++ TV+F CPA+ +P +I VDL+ L + + ++K+
Sbjct: 125 VLNIVRHTVEFHCPANDIPEFITVDLAGLKIGDNVHISNVKL 166
>gi|348689661|gb|EGZ29475.1| hypothetical protein PHYSODRAFT_468557 [Phytophthora sojae]
Length = 254
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 59 RASPGTRVSVKERKAGRVPSIVF-EQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSR 117
R + G+R S + RK G +P +++ E EDG+ + L+S T ++ L S ++
Sbjct: 41 RETEGSRASRRLRKQGFLPGVLYGEGEDGKD--ERVLVSFPTRTFERMHRKLWTSI-ENQ 97
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
+F ++V + V+ R V L TD P+ V FLR P K+ +P+ + +
Sbjct: 98 VFQVQVDDQ-------PPVKAYMRDVQLDPVTDVPVAVNFLRFKPGR--KVSIPITYLNE 148
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
+ SPGL++GG++N I +++ D +P + +D++ L V K+ +K +
Sbjct: 149 EGSPGLKRGGFINHIHHSLECSIFTDDIPTTLQIDVNGLHVGDKVYLDAIKFPEGVVPNI 208
Query: 238 SKDEPVCKIAGGRA 251
+ V KIAG R
Sbjct: 209 PEGSLVAKIAGRRG 222
>gi|393722732|ref|ZP_10342659.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. PAMC 26605]
Length = 225
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 27/165 (16%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKR---LISVQTNQIRKLV--GHLGRSFFVSRLFDLEVRS 125
R+ GRVP++++ GNK+ I V+ + +L+ GH S V
Sbjct: 24 RREGRVPAVIY--------GNKQEPLSIHVEEKALMRLLMTGHFMNSV---------VMI 66
Query: 126 EFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK 185
+ G ++VR LP+ V + TD P +V FLR + + + VP+ F +D +PG+ K
Sbjct: 67 DAGG----QQVRTLPKDVSFDAVTDRPTHVDFLRISAHSTVTVQVPIAFTDEDDAPGIAK 122
Query: 186 -GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
GG LN + ++ +C A +P I + L+ L+V I D+K+
Sbjct: 123 AGGVLNVTRHELELVCDAANIPSEITISLAGLEVGASIHISDVKL 167
>gi|77164043|ref|YP_342568.1| 50S ribosomal protein L25 [Nitrosococcus oceani ATCC 19707]
gi|254435005|ref|ZP_05048512.1| ribosomal protein L25, Ctc-form [Nitrosococcus oceani AFC27]
gi|109893372|sp|Q3JDQ8.1|RL25_NITOC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|76882357|gb|ABA57038.1| LSU ribosomal protein L25P [Nitrosococcus oceani ATCC 19707]
gi|207088116|gb|EDZ65388.1| ribosomal protein L25, Ctc-form [Nitrosococcus oceani AFC27]
Length = 214
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S + R+AG+VP++++ G K IS+ + L HL F S +
Sbjct: 12 RVEQGKGASRRLRRAGKVPAVLY-------GAAKEPISLLFDH-NLLFRHLSHDAFYSHI 63
Query: 119 FDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
+ ++E +++ V P KV L++ R L I VPL F G
Sbjct: 64 LTIHANGKAERVVLKALQRDPVNPNKV---------LHLDLQRVSSTQKLTIKVPLHFIG 114
Query: 177 DDVSPGLRK-GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----H 230
D+++PG+++ GG + + ++ C A +P YI+VDL++L V + + DLK+
Sbjct: 115 DEMAPGVKQEGGTVARLLNDIEISCLAKDLPEYIEVDLADLGVGETVHLSDLKLPGGVEI 174
Query: 231 PALKLLRSKDEPVCKIAGGRASDQKK 256
PALKL D+PV I RA+ +++
Sbjct: 175 PALKLGEDYDQPVVTIHKPRAAAEEE 200
>gi|237745396|ref|ZP_04575877.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes HOxBLS]
gi|229378870|gb|EEO28961.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes HOxBLS]
Length = 205
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A RA GT S + R AG P IV+ GG ++++ + L L R
Sbjct: 3 VIAYTRAEIGTGASRRLRAAGMAPGIVY-------GGTSEPVNIKLDH-NALFYALKREA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLE+ G + +VL R +H+ L+V F R + + VPL
Sbjct: 55 FHSSILDLEID---GKAE-----KVLLRDFQVHAYKPLVLHVDFQRVDANQKITVKVPLH 106
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F +D SP K G ++ ++ C +P +I+VDL+ LDV Q I DLK+
Sbjct: 107 FINEDASPA-AKSGVVHHAATELEISCLPGNLPAFIEVDLANLDVGQTIHLSDLKL 161
>gi|319408909|emb|CBI82566.1| 50S ribosomal protein L25 [Bartonella schoenbuchensis R1]
Length = 204
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 56/89 (62%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
++++VLP+ L D PL+V FLR ++++ +++P+ F +D +PG+++GG LN ++
Sbjct: 71 KRIQVLPKDYQLDPVRDFPLHVDFLRVSEKSVVHVNIPVHFLNEDTAPGIKRGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ PA+ +P I++DLS + I
Sbjct: 131 HEIECTAPANAIPEAINIDLSSYSIGDSI 159
>gi|395783967|ref|ZP_10463815.1| 50S ribosomal protein L25 [Bartonella melophagi K-2C]
gi|395425235|gb|EJF91405.1| 50S ribosomal protein L25 [Bartonella melophagi K-2C]
Length = 204
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
++++VLP+ L D P++V FLR ++++ +++P+ F +D +PG+++GG LN ++
Sbjct: 71 KRIQVLPKDYQLDPVRDFPMHVDFLRVSEKSIVHVNIPVHFLNEDTAPGIKRGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK-LLRSKDEPVCKIAG 248
++ PA+ +P I++DLS + I +++ + +++ +D + IA
Sbjct: 131 HEIECTAPANAIPEAINIDLSSYSIGDSIHISAVQLPEGVTPVIQDRDFTIATIAA 186
>gi|430004263|emb|CCF20054.1| 50S ribosomal protein L25 [Rhizobium sp.]
Length = 204
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 23/155 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + ++V +
Sbjct: 25 RRNGFIPAVIY--------GDKQPPISIALSTNEVTKRI-HAGG--FMTTIATIDVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K +VLP+ L D ++V FLR + + +DVP+ F D S G++ GG
Sbjct: 73 -------KYQVLPKDYQLDPVRDFTMHVDFLRVSKDTAVTVDVPVHFINDQKS-GVKIGG 124
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
LN ++ TV+F CPAD +P I VDL+ + I
Sbjct: 125 VLNIVRHTVEFNCPADAIPDSITVDLTGFKIGDSI 159
>gi|254500889|ref|ZP_05113040.1| ribosomal protein L25, Ctc-form [Labrenzia alexandrii DFL-11]
gi|222436960|gb|EEE43639.1| ribosomal protein L25, Ctc-form [Labrenzia alexandrii DFL-11]
Length = 176
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 52/85 (61%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
EK +V+ + LH D L+V FLR L +D+P+ F ++ PGL+KGG LN ++
Sbjct: 40 EKHQVIAKDFQLHPVRDDVLHVDFLRVSGNTTLTVDIPVTFINEETCPGLKKGGMLNVVR 99
Query: 194 RTVKFLCPADIVPPYIDVDLSELDV 218
TV+ + PA+ +P + DL+++D+
Sbjct: 100 HTVELIVPANAIPETLVFDLAKVDI 124
>gi|254780418|ref|YP_003064831.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040095|gb|ACT56891.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Liberibacter asiaticus str. psy62]
Length = 191
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 16/159 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
RK G++P+I++ + + + I++ I K L F++ + L++ E
Sbjct: 25 RKNGQIPAIIY-----GNMSDPKPIALSAKDISK---RLYSKNFMTTILTLDIGKEL--- 73
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
V V+P+ L +D ++ FL+ + + + VP+ F ++ SPG+++GG LN
Sbjct: 74 -----VHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGKLN 128
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+ V LCPA+ +P I VDL++L + I D+++
Sbjct: 129 VVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRL 167
>gi|330813694|ref|YP_004357933.1| 50S ribosomal protein L25 [Candidatus Pelagibacter sp. IMCC9063]
gi|327486789|gb|AEA81194.1| LSU ribosomal protein L25p [Candidatus Pelagibacter sp. IMCC9063]
Length = 237
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 16/166 (9%)
Query: 69 KERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFG 128
K R G VP +++ G N +L +V+ N + KL+ +G F+S + D++V +
Sbjct: 23 KLRIDGFVPGVLY----GDVETNFKL-AVKKNALEKLL-KIGN--FMSTVIDIKVAGK-- 72
Query: 129 SGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGY 188
+ +VLPR + + T+ P++V F + + + +P+ F + + PGL+ GG
Sbjct: 73 ------EYKVLPRDIEFNKLTNQPIHVDFQKISAGTKVVVWIPVKFINESICPGLKMGGV 126
Query: 189 LNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
LN ++R V+ CPAD +P + DL E + + I +K+ +K
Sbjct: 127 LNIVRRKVELNCPADQIPAELVCDLGEKQLNESIHISSIKLPENVK 172
>gi|408787875|ref|ZP_11199601.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
lupini HPC(L)]
gi|424910946|ref|ZP_18334323.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv. viciae
USDA 2370]
gi|392846977|gb|EJA99499.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv. viciae
USDA 2370]
gi|408486339|gb|EKJ94667.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
lupini HPC(L)]
Length = 202
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 88/162 (54%), Gaps = 23/162 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + ++V +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPISIALSTNEVTKRI-HAGG--FMTTVATIDVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K++VLP+ L D ++V FLR L+ +++P+ F ++ S ++ GG
Sbjct: 73 -------KIKVLPKDYQLDPVRDFTMHVDFLRVSGNTLVNVEIPVHFENEEKS-DIKIGG 124
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
LN ++ TV+F CPA+ +P I VDLS L + + ++K+
Sbjct: 125 VLNIVRHTVEFHCPANDIPEAITVDLSGLKIGDSVHISNVKL 166
>gi|300692631|ref|YP_003753626.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum PSI07]
gi|299079691|emb|CBJ52368.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum PSI07]
gi|344168270|emb|CCA80543.1| 5S rRNA binding 50S ribosomal subunit protein L25 [blood disease
bacterium R229]
Length = 203
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 19/185 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R+ GT S + R AG+ P+I++ G +L+ + N + L +
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPAIIYGG-----GAEPKLVELDHNALYHA---LKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + D+EV + +EK L R LH L+V F R + + VPL
Sbjct: 55 FHSSILDIEVAGK------VEKA--LLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLH 106
Query: 174 FRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
F + +PG++ G G +N I V+ C PAD+ P +I+VDL L++ Q + DLK+
Sbjct: 107 FLNQENAPGVKLGHGIVNHILNDVEVSCLPADL-PEFIEVDLGALEIGQTVHISDLKLPK 165
Query: 232 ALKLL 236
+ +L
Sbjct: 166 GVTIL 170
>gi|237749455|ref|ZP_04579935.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes OXCC13]
gi|229380817|gb|EEO30908.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes OXCC13]
Length = 209
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 19/177 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I+A RA G+ S + R AG P IV+ GGN ++++ + L L R
Sbjct: 3 IIAYTRAEIGSGASRRLRAAGMAPGIVY-------GGNSEPLNIKLDH-NALFYALKREA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLE+ + +VL R +H+ L+V F R + + VPL
Sbjct: 55 FHSSILDLEIDGK--------NQQVLLRDFQVHAYKPVVLHVDFQRVDANQKINVKVPLH 106
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
F +D S +K G ++ ++ C PA++ P +I+VDL L++ Q I GDLK+
Sbjct: 107 FVNEDASSA-KKSGVVHHAVTELEISCLPANL-PAFIEVDLGNLEIGQTIHLGDLKL 161
>gi|15889503|ref|NP_355184.1| 50S ribosomal protein L25 [Agrobacterium fabrum str. C58]
gi|335033843|ref|ZP_08527207.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
sp. ATCC 31749]
gi|71153115|sp|Q8UDA0.1|RL25_AGRT5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|15157377|gb|AAK87969.1| 50S ribosomal protein L25 [Agrobacterium fabrum str. C58]
gi|333794728|gb|EGL66061.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
sp. ATCC 31749]
Length = 202
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 88/162 (54%), Gaps = 23/162 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + ++V +
Sbjct: 25 RRNGLIPAVIY--------GDKQAPISIALSTNEVTKRI-HAGG--FMTTVGTIDVDGK- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K++VLP+ L D ++V FLR L+ +++P+ F ++ S ++ GG
Sbjct: 73 -------KIKVLPKDYQLDPVRDFTMHVDFLRVSGNTLVNVEIPVHFENEEKSD-IKIGG 124
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
LN ++ TV+F CPA+ +P I VDLS L + + ++K+
Sbjct: 125 VLNIVRHTVEFHCPANDIPEAITVDLSGLKIGDSVHISNVKL 166
>gi|23009667|ref|ZP_00050632.1| COG1825: Ribosomal protein L25 (general stress protein Ctc)
[Magnetospirillum magnetotacticum MS-1]
Length = 226
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 21/181 (11%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHL 109
+T+ A+ R G + R+ G++P++++ GGN+ + I++ + R L+
Sbjct: 5 KTLEAVARDRVGKGAARAVRRQGQIPAVIY-------GGNQPPQSIAIDLIRTRTLIYAG 57
Query: 110 GRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
G F + LF++ V + K R +PR L + PL+V FLR + +D
Sbjct: 58 G---FKTTLFEITVGGK--------KTRAIPRDFQLDPVSGVPLHVDFLRVVSGQTVTVD 106
Query: 170 VPLVFRGDDVSPGL-RKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
VP+ F +D +PG+ +KGG LN T+ D +P +++DL+ ++ I A DL+
Sbjct: 107 VPVHFVNEDQAPGIKKKGGTLNVALHTLSLEVAPDQIPDAVEIDLAGREIGDVIHASDLR 166
Query: 229 V 229
+
Sbjct: 167 L 167
>gi|153008961|ref|YP_001370176.1| 50S ribosomal protein L25/general stress protein Ctc [Ochrobactrum
anthropi ATCC 49188]
gi|404318683|ref|ZP_10966616.1| 50S ribosomal protein L25/general stress protein Ctc [Ochrobactrum
anthropi CTS-325]
gi|166223698|sp|A6WZE3.1|RL25_OCHA4 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|151560849|gb|ABS14347.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ochrobactrum
anthropi ATCC 49188]
Length = 209
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 57/85 (67%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K++VLP+ L D P +V FLR ++++ ++VP+ F+ ++ +PG+++GG LN ++
Sbjct: 71 KKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDV 218
V+ + PA+ +P ++ DL+ L++
Sbjct: 131 HDVELIVPANAIPEALEFDLTGLEI 155
>gi|393775374|ref|ZP_10363688.1| 50S ribosomal protein l25/general stress protein ctc [Ralstonia sp.
PBA]
gi|392717951|gb|EIZ05511.1| 50S ribosomal protein l25/general stress protein ctc [Ralstonia sp.
PBA]
Length = 206
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 23/180 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R+ GT S + R AG+ P I++ GG+ +LI + N L L +
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPGIIY-------GGSAEPKLIELDHNA---LFHALKK 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + D+EV + +VL R +H L++ F R A + + VP
Sbjct: 53 EAFHSSILDMEVAGK--------AEKVLLRDFQMHPFKPMVLHIDFQRVDANAKIHVKVP 104
Query: 172 LVFRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
L F + +PG++ G G +N I ++ C PAD+ P +I+VDL L++ Q + DLK+
Sbjct: 105 LHFLNTETAPGVKVGHGIVNHIANELEVSCLPADL-PEFIEVDLGALELGQSLHLSDLKL 163
>gi|344173546|emb|CCA88713.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
syzygii R24]
Length = 207
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 19/185 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R+ GT S + R AG+ P+I++ G +L+ + N + L +
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPAIIYGG-----GAEPKLVELDHNALYHA---LKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + D+EV + +EK L R LH L+V F R + + VPL
Sbjct: 55 FHSSILDIEVAGK------VEKA--LLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLH 106
Query: 174 FRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
F + +PG++ G G +N I V+ C PAD+ P +I+VDL L++ Q + DLK+
Sbjct: 107 FLNQENAPGVKLGHGIVNHILNDVEVSCLPADL-PEFIEVDLGALEIGQTVHISDLKLPK 165
Query: 232 ALKLL 236
+ +L
Sbjct: 166 GVTIL 170
>gi|300115103|ref|YP_003761678.1| ribosomal 5S rRNA E-loop-binding protein Ctc/l25/Tl5 [Nitrosococcus
watsonii C-113]
gi|299541040|gb|ADJ29357.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosococcus
watsonii C-113]
Length = 215
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 25/196 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G S + R+AG+VP++++ G K IS+ + L HL F S +
Sbjct: 12 RAEQGKGASRRLRRAGKVPAVLY-------GAAKEPISLIFDH-NLLFRHLSHDAFYSHI 63
Query: 119 FDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
+ ++E +++ V P KV L++ R L I VPL F G
Sbjct: 64 LTIHANGKAEKVVLKALQRDPVNPNKV---------LHLDLQRVSAAQKLTIKVPLHFIG 114
Query: 177 DDVSPGLRK-GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----H 230
D+ +PG+++ GG + + V+ C A +P YI+VDL+ L V + + DLK+
Sbjct: 115 DETAPGVKQEGGTVARLLNDVEVSCLAKDLPEYIEVDLANLGVGETVHLSDLKLPGGVEI 174
Query: 231 PALKLLRSKDEPVCKI 246
PALKL D+PV I
Sbjct: 175 PALKLGEDHDQPVVTI 190
>gi|261219662|ref|ZP_05933943.1| 50S ribosomal protein L25 [Brucella ceti M13/05/1]
gi|261322551|ref|ZP_05961748.1| 50S ribosomal protein L25 [Brucella ceti M644/93/1]
gi|260924751|gb|EEX91319.1| 50S ribosomal protein L25 [Brucella ceti M13/05/1]
gi|261295241|gb|EEX98737.1| 50S ribosomal protein L25 [Brucella ceti M644/93/1]
Length = 207
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 100/194 (51%), Gaps = 23/194 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFV 115
R G S + R+ G++P++++ G+K+ I+V +I + G F
Sbjct: 12 RTRVGKGSSRELRRNGQIPAVIY--------GDKQEPLAIAVSYKEIFYKIHGGG---FK 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + +EV + K++VLP+ L D P +V FL ++++ ++VP+ F+
Sbjct: 61 TTVATIEVDGK--------KIQVLPKDYQLDPVRDFPQHVDFLLVSAKSVVHVNVPVHFK 112
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALK 234
++ +PG+++GG LN ++ V+ + PA+ +P +++DLS L++ + +K+ A
Sbjct: 113 NEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATP 172
Query: 235 LLRSKDEPVCKIAG 248
++ +D + IA
Sbjct: 173 AIQDRDFTIATIAA 186
>gi|163851898|ref|YP_001639941.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium extorquens PA1]
gi|254561616|ref|YP_003068711.1| 50S ribosomal protein L25 [Methylobacterium extorquens DM4]
gi|226736336|sp|A9W5L4.1|RL25_METEP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|163663503|gb|ABY30870.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium extorquens PA1]
gi|254268894|emb|CAX24855.1| 50S ribosomal protein L25 (General stress protein CTC)
[Methylobacterium extorquens DM4]
Length = 228
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 21/181 (11%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHL 109
+T+ A+ R G + R+ G++P++++ GGN+ + I++ + R L+
Sbjct: 5 KTLEAVARDRVGKGAARAVRRQGQIPAVIY-------GGNQAPQAIAIDLIRARTLIYAG 57
Query: 110 GRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
G F + +F+++ + K R +PR L + PL+V FLR + +D
Sbjct: 58 G---FKTTVFEIDAGGK--------KTRAIPRDYQLDPVSGVPLHVDFLRVVAGQTVTVD 106
Query: 170 VPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
VP+ F +D +PG++ KGG LN T+ D +P I+VDL+ ++ I A DL+
Sbjct: 107 VPVHFVNEDQAPGIKQKGGTLNVALHTLSLEVAPDQIPDAIEVDLAGREIGDVIHASDLR 166
Query: 229 V 229
+
Sbjct: 167 L 167
>gi|262276844|ref|ZP_06054637.1| ribosomal protein L25, Ctc-form [alpha proteobacterium HIMB114]
gi|262223947|gb|EEY74406.1| ribosomal protein L25, Ctc-form [alpha proteobacterium HIMB114]
Length = 235
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 16/172 (9%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLG 110
+ TI A+ R++ K R G VP I++ G N L SV+ + + L
Sbjct: 5 NNTIEAVLRSTKTKSELNKLRSEGFVPGILY----GDIDKNINL-SVKKSTLDHF---LK 56
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
+ F S++F + + + + VLPR + + ++ P++V F + + + +
Sbjct: 57 TTNFKSKVFKINLDGK--------EYEVLPRDIEFENISNQPIHVDFQKLSTNTKVVVWI 108
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
P+ F ++ PGL+ GG LN ++R V+ CPAD +P ++VDL++ ++ + I
Sbjct: 109 PVKFLNEETCPGLKMGGVLNIVRRKVELDCPADKIPSELNVDLAKREIGESI 160
>gi|260431160|ref|ZP_05785131.1| ribosomal protein L25, Ctc-form [Silicibacter lacuscaerulensis
ITI-1157]
gi|260414988|gb|EEX08247.1| ribosomal protein L25, Ctc-form [Silicibacter lacuscaerulensis
ITI-1157]
Length = 215
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A+ R G + + R+ G VP IVF GG+K + +Q +L L
Sbjct: 8 LVALERTGTGKGAARQARRDGMVPGIVF-------GGDKDPLPIQI-PFNELFKRLKAGR 59
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S L++L+V E VRV+ R V D P ++ +R + + + +P+
Sbjct: 60 FKSTLWNLKVEGH-------EDVRVICRDVQRDVVKDLPTHLDLMRLRRTSRIALYIPVE 112
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
F ++ +PG++KGG L ++ V+ +C A +P I VDL+ L++ +
Sbjct: 113 FINEEAAPGIKKGGVLTVVRPEVELVCTAGDIPEKITVDLTGLNINDVV 161
>gi|261855769|ref|YP_003263052.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Halothiobacillus neapolitanus c2]
gi|261836238|gb|ACX96005.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Halothiobacillus neapolitanus c2]
Length = 204
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGRSF 113
A R G S + R+ GR+P+IV+ GG++ + +++ N+I K HL
Sbjct: 10 AARRDDQGKGASRRLRREGRIPAIVY-------GGDEAPQSVTILHNEILK---HLEHEA 59
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + +L + + +V+ R +H H ++ F R L++ VPL
Sbjct: 60 FYSHVLELNIDGKTS--------KVILRDLHRHPYKPLIMHADFQRVSANQSLRVTVPLH 111
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F + S G + GG +N I ++ C A+ +P +I+VD+ +LD+ I +K+
Sbjct: 112 FLNKETSVGAKAGGIVNVILSEIEVDCTANKLPEFIEVDMKDLDIGGSIHLSQIKM 167
>gi|433614179|ref|YP_007190977.1| ribosomal protein L25, Ctc-form [Sinorhizobium meliloti GR4]
gi|429552369|gb|AGA07378.1| ribosomal protein L25, Ctc-form [Sinorhizobium meliloti GR4]
Length = 204
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
EK+RVLP+ L D ++V FLR + + + VP+ F ++ SPGL++GG LN ++
Sbjct: 71 EKIRVLPKDYQLDPVRDFTMHVDFLRVSKGSQVSVQVPVHFENEEKSPGLKQGGALNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALKLLRSKDEPVCKIAG 248
V+ AD +P + VDL+ L + + D+K+ A ++ +D V I G
Sbjct: 131 HEVELNVSADNIPESLTVDLTGLKIGDTVHISDVKLPAGATPVIADRDFTVATITG 186
>gi|372487715|ref|YP_005027280.1| 50S ribosomal protein L25 [Dechlorosoma suillum PS]
gi|359354268|gb|AEV25439.1| ribosomal protein L25, Ctc-form [Dechlorosoma suillum PS]
Length = 200
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 18/188 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R GT S + R+AG+VP IV+ GG IS++ + + L + F S L
Sbjct: 10 RNDQGTGASRRLRRAGKVPGIVY-------GGTAAPISIEVDH-NAIYLALRKEAFHSSL 61
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
+L + + K VL R H L+V F R P L VPL F D
Sbjct: 62 INLNIDGK--------KESVLLRDYQAHPYKAIVLHVDFQRVDPNQKLHTKVPLHFVNAD 113
Query: 179 VSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
++PG++ GG ++ + V+ C A +P +I+VDL +L I D+K+ + L++
Sbjct: 114 IAPGVKLGGGIVSHVLNEVEVTCLAADLPEFIEVDLKDLAAGHSIHIADVKLPKGVALVQ 173
Query: 238 -SKDEPVC 244
+D PV
Sbjct: 174 HGQDNPVV 181
>gi|292493880|ref|YP_003529319.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosococcus
halophilus Nc4]
gi|291582475|gb|ADE16932.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosococcus
halophilus Nc4]
Length = 211
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S + R+AG+VP+I++ G K +S+ + L HLG F S +
Sbjct: 12 RGEQGKGASRRLRRAGKVPAILY-------GAGKEPVSLTLDH-NLLFQHLGYEAFYSHI 63
Query: 119 FDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
+ ++E +++ P KV L++ R P L I V L F G
Sbjct: 64 LTIHANGKTEKAVLKALQRDPANPNKV---------LHLDLQRVSPTQKLSISVHLHFMG 114
Query: 177 DDVSPGLRK-GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----H 230
DDV+ G+R+ GG + + V+ C A +P I+VDL++L + + DLK+
Sbjct: 115 DDVARGVRQEGGVVARLLNDVEITCLAKDLPESIEVDLTDLGAGEALHLSDLKLPEGVEI 174
Query: 231 PALKLLRSKDEPVCKI 246
PALKL D+PV I
Sbjct: 175 PALKLGEDYDQPVVTI 190
>gi|294085760|ref|YP_003552520.1| 50S ribosomal protein L25 [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665335|gb|ADE40436.1| 50S ribosomal protein L25 [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 211
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI A R G + R+AG VP++++ + G I++ T +I K+V G
Sbjct: 6 TISAEQRERVGKGSARAARRAGLVPAVIYGDKKEPLG-----INMSTREITKIVHQPG-- 58
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
RL ++ V + K VL R + H +D L++ FLR + + VP+
Sbjct: 59 -IFGRLLEIVVDGK--------KSTVLTRDIQFHPVSDTILHMDFLRVSGSVKVAVGVPV 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
F +D+ P L+ GG LN ++ ++ CPA +P I +DL L + I
Sbjct: 110 EFINEDLCPALKIGGVLNVVRHEIELNCPATDIPEKIIIDLDGLKIGDSI 159
>gi|328542809|ref|YP_004302918.1| 50S ribosomal protein L25 [Polymorphum gilvum SL003B-26A1]
gi|326412555|gb|ADZ69618.1| 50S ribosomal protein L25 [Polymorphum gilvum SL003B-26A1]
Length = 200
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 78/148 (52%), Gaps = 16/148 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P++++ G+K+ T I++ +L + F++ + ++V E
Sbjct: 24 RREGLLPAVIY--------GDKKPALPITVPIKESTLNLHKGGFLTHIGVIDVDGE---- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
K +V+ + LH D +++ FLR L +D+P+ F + PG+++GG LN
Sbjct: 72 ----KHQVIAKDYQLHPVRDELMHIDFLRVSANTTLTVDIPVHFLNQETCPGIKRGGVLN 127
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDV 218
++ V+ PA+ +P +I++DL++ D+
Sbjct: 128 IVRHAVEMTVPANAIPEFIELDLAKADL 155
>gi|395786698|ref|ZP_10466425.1| 50S ribosomal protein L25 [Bartonella tamiae Th239]
gi|423716408|ref|ZP_17690598.1| 50S ribosomal protein L25 [Bartonella tamiae Th307]
gi|395422996|gb|EJF89192.1| 50S ribosomal protein L25 [Bartonella tamiae Th239]
gi|395429337|gb|EJF95405.1| 50S ribosomal protein L25 [Bartonella tamiae Th307]
Length = 210
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K++VLP+ L D P++V FLR ++++ +++P+ F ++ +PG++ GG LN ++
Sbjct: 71 QKIQVLPKDYQLDPVRDFPMHVDFLRVSAKSVVTVEIPVRFLNEEAAPGIKLGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK-LLRSKDEPVCKIA 247
V+ PA+ +P I++DL+ +V I +K+ ++ +++ +D + IA
Sbjct: 131 HEVEVTAPANSIPDSIEIDLTGYEVGDSIHISAVKLPNGVEPVIQDRDFTIATIA 185
>gi|398829009|ref|ZP_10587209.1| ribosomal protein L25, Ctc-form [Phyllobacterium sp. YR531]
gi|398217867|gb|EJN04384.1| ribosomal protein L25, Ctc-form [Phyllobacterium sp. YR531]
Length = 212
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 53/79 (67%)
Query: 136 VRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRT 195
++VLP+ L +D P++V FLR ++++ + VP+ F +++SPG+++GG LN ++
Sbjct: 73 IQVLPKDYQLDPVSDKPVHVDFLRVSAKSVVNVHVPIHFLNEELSPGIKRGGVLNIVRHD 132
Query: 196 VKFLCPADIVPPYIDVDLS 214
V+ PA+ +P I++DL+
Sbjct: 133 VELHAPANAIPEAIEIDLT 151
>gi|83746829|ref|ZP_00943876.1| LSU ribosomal protein L25P [Ralstonia solanacearum UW551]
gi|207742239|ref|YP_002258631.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia
solanacearum IPO1609]
gi|421899870|ref|ZP_16330233.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia
solanacearum MolK2]
gi|83726414|gb|EAP73545.1| LSU ribosomal protein L25P [Ralstonia solanacearum UW551]
gi|206591076|emb|CAQ56688.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia
solanacearum MolK2]
gi|206593627|emb|CAQ60554.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia
solanacearum IPO1609]
Length = 203
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R+ GT S + R AG+ P+I++ G ++I + N + L +
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPAIIYGG-----GAEPKMIELDHNALYHA---LKKEA 54
Query: 114 FVSRLFDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + D+EV +SE + L R LH L+V F R + + VP
Sbjct: 55 FHSSILDIEVAGKSE----------KALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVP 104
Query: 172 LVFRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
L F + +PG++ G G +N I V+ C PAD+ P +I+VDL L++ Q + DLK+
Sbjct: 105 LHFLNQENAPGVKLGHGIVNHILNDVEVSCLPADL-PEFIEVDLGALEIGQTLHISDLKL 163
Query: 230 HPALKLL 236
+ +L
Sbjct: 164 PKGVTIL 170
>gi|300705252|ref|YP_003746855.1| 5S rRNA binding 50S ribosomal subunit protein l25 [Ralstonia
solanacearum CFBP2957]
gi|421889572|ref|ZP_16320597.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum K60-1]
gi|299072916|emb|CBJ44272.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum CFBP2957]
gi|378965094|emb|CCF97345.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum K60-1]
Length = 203
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R+ GT S + R AG+ P+I++ G ++I + N + L +
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPAIIYGG-----GAEPKMIELDHNALYHA---LKKEA 54
Query: 114 FVSRLFDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + D+EV +SE + L R LH L+V F R + + VP
Sbjct: 55 FHSSILDIEVAGKSE----------KALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVP 104
Query: 172 LVFRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
L F + +PG++ G G +N I V+ C PAD+ P +I+VDL L++ Q + DLK+
Sbjct: 105 LHFLNQENAPGVKLGHGIVNHILNDVEVSCLPADL-PEFIEVDLGTLEIGQTLHISDLKL 163
Query: 230 HPALKLL 236
+ +L
Sbjct: 164 PKGVTIL 170
>gi|386334668|ref|YP_006030839.1| 5S rRNA binding 50S ribosomal subunit protein l25 [Ralstonia
solanacearum Po82]
gi|334197118|gb|AEG70303.1| 5S rRNA binding 50S ribosomal subunit protein l25 [Ralstonia
solanacearum Po82]
Length = 202
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R+ GT S + R AG+ P+I++ G ++I + N + L +
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPAIIYGG-----GAEPKMIELDHNALYHA---LKKEA 54
Query: 114 FVSRLFDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + D+EV +SE + L R LH L+V F R + + VP
Sbjct: 55 FHSSILDIEVAGKSE----------KALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVP 104
Query: 172 LVFRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
L F + +PG++ G G +N I V+ C PAD+ P +I+VDL L++ Q + DLK+
Sbjct: 105 LHFLNQENAPGVKLGHGIVNHILNDVEVSCLPADL-PEFIEVDLGTLEIGQTLHISDLKL 163
Query: 230 HPALKLL 236
+ +L
Sbjct: 164 PKGVTIL 170
>gi|389693984|ref|ZP_10182078.1| ribosomal protein L25, Ctc-form [Microvirga sp. WSM3557]
gi|388587370|gb|EIM27663.1| ribosomal protein L25, Ctc-form [Microvirga sp. WSM3557]
Length = 205
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 20/178 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLV--GHLGR 111
I A+ R G + R+ G+VP++++ + I++ NQ ++L+ GH
Sbjct: 7 IKAVARDRSGKGAARAVRRQGQVPAVIYGAGQ-----AAQAIALDFNQTKQLIFAGH--- 58
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F++ +F+++V + VR +PR L D P++V FLR +K+ VP
Sbjct: 59 --FLTTIFEIDVNGQ--------TVRAIPRDYQLDPVRDFPIHVDFLRVSAGQTIKVVVP 108
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+ G + SPG+++GG L ++ TV+ D +P YI+ + LD+ + D+K+
Sbjct: 109 VHVVGQEKSPGVKRGGTLQVVEHTVELAVSPDAIPDYIEASVEGLDIGSSVHLEDIKL 166
>gi|344345142|ref|ZP_08775998.1| 50S ribosomal protein L25 [Marichromatium purpuratum 984]
gi|343803233|gb|EGV21143.1| 50S ribosomal protein L25 [Marichromatium purpuratum 984]
Length = 203
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGH 108
D I+A PR + G S + R+AG VP+IV+ GG++ ++I++ N++ K H
Sbjct: 4 DFNIVAQPRETVGKGASRRLRRAGEVPAIVY-------GGHQEPQMITLPHNELLK---H 53
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
L F S + L+V E S V+ + + H +V FLR L++
Sbjct: 54 LEHEAFYSHVLTLQVGDETSS--------VVLKDLQRHPAKPFIQHVDFLRVTQGEKLRM 105
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
VPL F ++ G++ GG ++ V+ C +P YI++D+ ++V + +L+
Sbjct: 106 SVPLHFLNEESCVGVKAGGLVSRSLTEVEVSCLPQDLPEYIEIDMVAMEVGAILHLSELQ 165
Query: 229 VHPALKLLRSK-DEPVCKIAGGRASDQKKSK 258
+ ++L + DE V I R ++S+
Sbjct: 166 LPAGVELAHAAGDEVVVAIQAPRGGADEESE 196
>gi|58584353|ref|YP_197926.1| 50S ribosomal protein L25 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|68053026|sp|Q5GTJ0.1|RL25_WOLTR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|58418669|gb|AAW70684.1| Ribosomal protein L25 (general stress protein Ctc) [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 204
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 16/171 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
RK G +P++V+ + G + N L + + + KL F + + +L++ SG
Sbjct: 26 RKKGNIPAVVYGK--GHNNVNLTLSAKEFTKQYKL------GFLSAHVIELDI-----SG 72
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
+K L R + H D +V F + +KID+PL F + SPG++ GG LN
Sbjct: 73 ---KKEYALVRDIQWHVVKDTIQHVDFQFVDKGSEIKIDIPLSFVNESKSPGIKLGGVLN 129
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDE 241
+ R++ C D +P I+VDLS + Q + D+K+ +KL ++E
Sbjct: 130 VLCRSITVKCSPDKIPQAIEVDLSGKMIGQSVHISDVKLPGGVKLAAHEEE 180
>gi|91775030|ref|YP_544786.1| 50S ribosomal protein L25P [Methylobacillus flagellatus KT]
gi|122985595|sp|Q1H3J2.1|RL25_METFK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91709017|gb|ABE48945.1| LSU ribosomal protein L25P [Methylobacillus flagellatus KT]
Length = 207
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI A R GT S + R+AG VP +V+ GG+K +S++ N ++L
Sbjct: 4 TIKATKREGKGTSASRRLRRAGNVPGVVY-------GGDKEAVSLEFNH-KELFLEFRHE 55
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F + + +LEV + K +V+ R LH + ++ F R + + VPL
Sbjct: 56 TFHASILNLEVDGQ--------KEQVVLRDYQLHPVRNTIQHIDFQRVSASEKVHVKVPL 107
Query: 173 VFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F D++PG++ GG + I C +P +I+VDLS L+ I +K+
Sbjct: 108 HFINADIAPGVKLAGGIVTHILTEADVSCLPKDLPEFIEVDLSNLEAGHSIHLSQIKL 165
>gi|90418284|ref|ZP_01226196.1| 50S ribosomal protein L25 [Aurantimonas manganoxydans SI85-9A1]
gi|90337956|gb|EAS51607.1| 50S ribosomal protein L25 [Aurantimonas manganoxydans SI85-9A1]
Length = 219
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K+ VLP+ L D ++V FLR + + +++P+ F ++ SPGL++GG +N ++
Sbjct: 71 QKISVLPKDYQLEPVRDFLMHVDFLRVSEKTRVTVNIPVHFENEEASPGLKRGGVINVVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
V+ PA +P Y +DL+ L++ I A L
Sbjct: 131 HEVEVHAPASAIPEYFTLDLTGLEIGDSIHASAL 164
>gi|345880120|ref|ZP_08831677.1| 50S ribosomal protein L25, Ctc-form [Prevotella oulorum F0390]
gi|343923697|gb|EGV34381.1| 50S ribosomal protein L25, Ctc-form [Prevotella oulorum F0390]
Length = 205
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 21/195 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSR 117
R G + S + RK G VP ++ ++ +G + L ++ +++RKL+ +
Sbjct: 11 RVDLGKKASKELRKQGFVPCNLYGEKKNDNGAPEALSFALPFSELRKLI-------YTPH 63
Query: 118 LF--DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
++ +LE+ + L ++V H TDAPL+V F + + I +P+
Sbjct: 64 IYVINLEIEGNHHTAIL--------KEVQFHPVTDAPLHVDFYEVNDQKPITIGIPVKLV 115
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G ++ G+R GG +N R + P +P ++D+D++ L + + I GDL L++
Sbjct: 116 G--LAQGVRDGGRMNLSIRKISVTAPYQQIPEHLDIDVTALKIGKSIKVGDLSFE-GLEI 172
Query: 236 LRSKDEPVCKIAGGR 250
SKD VC I R
Sbjct: 173 ATSKDVVVCSIKMTR 187
>gi|254491052|ref|ZP_05104233.1| ribosomal protein L25, Ctc-form [Methylophaga thiooxidans DMS010]
gi|224463565|gb|EEF79833.1| ribosomal protein L25, Ctc-form [Methylophaga thiooxydans DMS010]
Length = 240
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
+ A R G S + R AG++P++V+ G +K +S+ N + + HL
Sbjct: 18 VQAEARTDEGKGASRRLRHAGKIPAVVY-------GADKDPVSISINH-NQFLRHLDEEA 69
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPL-NVTFLRAPPEALLKIDVPL 172
F + + L++ + K +V+ + + H D + + FLR + + + VP+
Sbjct: 70 FYAHILTLDIAGK--------KDQVVLKDLQRHPANDNKIIHADFLRVDAKHEMTMTVPV 121
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVE 219
F G+DV+PG++ GG ++ + V+ C +P YI+ D+S ++++
Sbjct: 122 HFIGEDVAPGVKDGGQVSHMITEVEIACLPQDLPEYIEADISGMEMD 168
>gi|254462647|ref|ZP_05076063.1| ribosomal protein L25, Ctc-form [Rhodobacterales bacterium
HTCC2083]
gi|206679236|gb|EDZ43723.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium
HTCC2083]
Length = 218
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G + + R+AG VP I+F GG+ + + L+ L F S L
Sbjct: 13 RTGTGKGAARQARRAGMVPGIIF-------GGDADPLPINV-PFNVLLKALKAGRFKSTL 64
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
+++V + VRV+ R V H D P ++ F+R + + +P+ F ++
Sbjct: 65 LNMKVEGH-------DDVRVICRDVQRHVVKDLPTHIDFMRLKRTTKINLFIPVEFINEE 117
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
+PG+++GG L T++ V+ + A +P + VD++ LDV I D+ + K
Sbjct: 118 AAPGIKRGGVLTTVRPEVELIVTAGDIPEKLTVDMTGLDVGDTINISDITLPAGAKPTID 177
Query: 239 KDEPVCKI---AGGRASDQK 255
+D V + +G ++SD +
Sbjct: 178 RDFVVANLSAPSGLKSSDNE 197
>gi|150397463|ref|YP_001327930.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium
medicae WSM419]
gi|166223724|sp|A6UBR5.1|RL25_SINMW RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|150028978|gb|ABR61095.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium
medicae WSM419]
Length = 207
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K+RVLP+ L D ++V FLR + + + VP+ F ++ SPGL++GG LN ++
Sbjct: 71 KKIRVLPKDYQLDPVRDFTMHVDFLRVKKGSQVSVQVPVRFENEEKSPGLKQGGALNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALKLLRSKDEPVCKIAG 248
V+ AD +P ++ VDL+ L + + ++++ A ++ +D V IAG
Sbjct: 131 HEVELNVSADNIPEFLTVDLTGLKIGDTVHISNVELPAGATPVITDRDFTVATIAG 186
>gi|346991774|ref|ZP_08859846.1| 50S ribosomal protein L25/general stress protein Ctc [Ruegeria sp.
TW15]
Length = 219
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 15/169 (8%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A+ R G + + R+ G VP IVF GG+K + +Q L L
Sbjct: 8 LVALERTGTGKGAARQARRDGMVPGIVF-------GGDKDPLPIQI-PFNVLFKRLKAGR 59
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S L++L+V E VRV+ R V D P ++ +R + + +P+
Sbjct: 60 FKSTLWNLKVEGH-------EDVRVICRDVQRDVVKDLPTHLDLMRLRRTTKIALFIPVE 112
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
F ++ +PG++KGG L ++ V+ LC A +P I VDL+ +++ +
Sbjct: 113 FVNEEAAPGIKKGGVLTVVRPEVELLCTAGDIPEKITVDLTGMEINDVV 161
>gi|71730260|gb|EAO32345.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1]
Length = 207
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLG 110
+ I A R G S + R AG +P+I++ GG +R +S+Q N + +
Sbjct: 3 NHQIKAQRRKDEGKGASRRLRHAGMIPAIIY-------GGEQRPVSIQLNHEQIWLAQ-Q 54
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
+F S + DL V G+GD +VL R + H ++V F R +A L + V
Sbjct: 55 NDWFYSSILDLNVD---GAGD----EKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAV 107
Query: 171 PLVFRGDDVSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
PL F SP + GG + T + V+ C +P +I+VDLS L+V I D+
Sbjct: 108 PLHFINQATSPADKAGGVVITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHLSDI 165
>gi|15966107|ref|NP_386460.1| 50S ribosomal protein L25 [Sinorhizobium meliloti 1021]
gi|334317111|ref|YP_004549730.1| 50S ribosomal protein L25 [Sinorhizobium meliloti AK83]
gi|384530239|ref|YP_005714327.1| 50S ribosomal protein L25 [Sinorhizobium meliloti BL225C]
gi|384535280|ref|YP_005719365.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium
meliloti SM11]
gi|407721413|ref|YP_006841075.1| 50S ribosomal protein L25 [Sinorhizobium meliloti Rm41]
gi|418403160|ref|ZP_12976656.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium
meliloti CCNWSX0020]
gi|71153163|sp|Q92N68.1|RL25_RHIME RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|15075377|emb|CAC46933.1| Putative 50S ribosomal protein L25 [Sinorhizobium meliloti 1021]
gi|333812415|gb|AEG05084.1| 50S ribosomal protein L25 [Sinorhizobium meliloti BL225C]
gi|334096105|gb|AEG54116.1| 50S ribosomal protein L25 [Sinorhizobium meliloti AK83]
gi|336032172|gb|AEH78104.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium
meliloti SM11]
gi|359502844|gb|EHK75410.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium
meliloti CCNWSX0020]
gi|407319645|emb|CCM68249.1| 50S ribosomal protein L25 [Sinorhizobium meliloti Rm41]
Length = 204
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
EK+RVLP+ L D ++V FLR + + + VP+ F ++ SPGL++GG LN ++
Sbjct: 71 EKIRVLPKDYQLDPVRDFTMHVDFLRVSKGSQVSVQVPVHFENEEKSPGLKQGGALNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALKLLRSKDEPVCKIAG 248
V+ AD +P + VDL+ L + + ++K+ A ++ +D V I G
Sbjct: 131 HEVELNVSADNIPESLTVDLTGLKIGDTVHISNVKLPAGATPVIADRDFTVATITG 186
>gi|407784048|ref|ZP_11131235.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibaculum
indicum P24]
gi|407198596|gb|EKE68628.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibaculum
indicum P24]
Length = 207
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 16/164 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G + + R+ G VP +++ G + + + N ++L L R F + L
Sbjct: 12 RDRAGKGAAREARRQGLVPGVIY-------GDKQSPVMINLNA-KELERQLRRPGFFNHL 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
F+++V + RVL R++ TD L+V FLR + +++ VP+ F +
Sbjct: 64 FEVKVGKDTH--------RVLARELQQDPVTDRALHVDFLRVSKNSRIEVAVPVHFINET 115
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
SPGL++GG LN ++ V+ C + +P + +DL+ DV I
Sbjct: 116 KSPGLKRGGVLNIVRHEVEVFCSPEAIPEELVIDLTGWDVGDSI 159
>gi|406941535|gb|EKD74001.1| 50S ribosomal protein L25 [uncultured bacterium]
Length = 236
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 18/172 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S + R A +VP+IV+ G ++ +S+ + + L L F S +
Sbjct: 14 REDIGKGASRRLRHADKVPAIVY-------GAGEQAVSLTLDHSKTLHA-LSHEAFYSHI 65
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
L+V S+ +V+ + + H ++ FLR + L + VPL F G++
Sbjct: 66 LTLKVGSK--------NEKVILKDIQRHPARPRITHIDFLRIRADQKLHMHVPLHFIGEE 117
Query: 179 VSPGLRKGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
+PG+++GG + + ++ +C PAD+ P +I+VD S L ++Q I +LK+
Sbjct: 118 NAPGIKEGGVFSHLMNDIEVICLPADL-PEFIEVDASNLALDQSIHLSELKL 168
>gi|71275258|ref|ZP_00651545.1| Ribosomal protein L25 [Xylella fastidiosa Dixon]
gi|170731256|ref|YP_001776689.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella
fastidiosa M12]
gi|226694605|sp|B0U5Y7.1|RL25_XYLFM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71164067|gb|EAO13782.1| Ribosomal protein L25 [Xylella fastidiosa Dixon]
gi|71728035|gb|EAO30246.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1]
gi|167966049|gb|ACA13059.1| 50S ribosomal protein L25 [Xylella fastidiosa M12]
Length = 207
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLG 110
+ I A R G S + R AG +P+I++ GG++R +S+Q N + +
Sbjct: 3 NHQIKAQRRKDEGKGASRRLRHAGMIPAIIY-------GGDQRPVSIQLNHEQIWLAQQN 55
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
F+ S + DL V + G G+ +VL R + H ++V F R +A L + V
Sbjct: 56 EWFY-SSILDLNV--DGGGGE-----KVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAV 107
Query: 171 PLVFRGDDVSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
PL F SP + GG + T + V+ C +P +I+VDLS L+V I D+
Sbjct: 108 PLHFINQATSPAGKAGGVVITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHLSDI 165
>gi|159043502|ref|YP_001532296.1| 50S ribosomal protein L25/general stress protein Ctc
[Dinoroseobacter shibae DFL 12]
gi|189042354|sp|A8LRY8.1|RL25_DINSH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|157911262|gb|ABV92695.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Dinoroseobacter shibae DFL 12]
Length = 211
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A PRA G + + R+ G VP +V+ G + + I ++ N+ L+ L
Sbjct: 8 LVAEPRAGTGKGAARQARRDGYVPGVVY-----GGGADPQPIQIKFNE---LLRRLKAGR 59
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F++ LF+L+V + E VRV+ R V D P ++ +R + + + +P+
Sbjct: 60 FMATLFNLKVEGQ-------EDVRVICRNVQRDVVKDLPTHLDLMRLRRTSKVNLFIPVE 112
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
F + +PG++KGG L ++ V+ A +P I VDL+ LD+ +
Sbjct: 113 FINEGAAPGIKKGGVLTAVRPEVELRVTAGDIPESITVDLTGLDIGDTV 161
>gi|339502103|ref|YP_004689523.1| 50S ribosomal protein L25 [Roseobacter litoralis Och 149]
gi|338756096|gb|AEI92560.1| 50S ribosomal protein L25 [Roseobacter litoralis Och 149]
Length = 212
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 15/169 (8%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R G + + R+ G VP IVF GG+ + + L+ L
Sbjct: 8 LVAQERTGTGKGAARQARRDGMVPGIVF-------GGDVDPLPINI-PFNVLIKKLREGR 59
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S LF+++V + VRV+ R V H D P ++ F+R + + + +
Sbjct: 60 FKSTLFNMKVEGH-------DDVRVICRDVQRHVVKDLPTHIDFMRLKRTTQINLFIAVE 112
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
G++ +PGL+KGG L I+ V+ + A +P +I +D+SE+++ I
Sbjct: 113 VDGEEEAPGLKKGGVLTLIRPEVELIVTAGDIPDHITIDISEMEIGDNI 161
>gi|333985476|ref|YP_004514686.1| 50S ribosomal protein L25 [Methylomonas methanica MC09]
gi|333809517|gb|AEG02187.1| 50S ribosomal protein L25 [Methylomonas methanica MC09]
Length = 204
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 55 LAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFF 114
+A R+ G+ + R+ G+VP++++ D ++ + N + K HL
Sbjct: 8 IAEARSETGSSAAKVVRRKGKVPAVIYGGSDA-----PEMLILDHNDLLK---HLAHEAV 59
Query: 115 VSRLFDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
S + D++V R+E + + + + H L+V F+R + LK+ VPL
Sbjct: 60 YSHVLDVKVDGRTE----------KAVLKHIQRHPAKPQILHVDFMRVEKDHKLKVHVPL 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV--- 229
F +DVS G++KGG +N V+ C +P YI+V+++ +++ + DL +
Sbjct: 110 HFINEDVSVGVKKGGIVNHTMADVEIACLPKDLPEYIEVNMAAVEIGSALHLSDLVLPAG 169
Query: 230 --HPALKLLRSKDEPVCKIAGGRASD 253
P L+ D PV +I + ++
Sbjct: 170 VEIPELQQGAEHDHPVVQIVKPKTAE 195
>gi|393765881|ref|ZP_10354441.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium sp. GXF4]
gi|392728773|gb|EIZ86078.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium sp. GXF4]
Length = 228
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHL 109
+T+ A+ R G + R+ G+VP++V+ GG + + I++ + R L+
Sbjct: 5 KTLEAVARDRVGKGAARAVRRQGQVPAVVY-------GGGQPPQSIAIDLVRARTLIYAG 57
Query: 110 GRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
G F + LF+++ + VR +PR L + PL+V FLR + ++
Sbjct: 58 G---FKTTLFEIKAGGK--------TVRAIPRDFQLDPVSGVPLHVDFLRVVSGQTVTVE 106
Query: 170 VPLVFRGDDVSPGLRK-GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
VP+ F + +PG++K GG LN + T+ D +P I+VDL+ ++ I D+K
Sbjct: 107 VPVHFINEAAAPGIKKLGGTLNIVAHTLTLEVAPDQIPDAIEVDLTGREIGDVIHVADIK 166
Query: 229 VHPALKLLRSKDEPVCKI 246
+ PA +PV I
Sbjct: 167 I-PAGSHTGEPTDPVANI 183
>gi|337287648|ref|YP_004627120.1| 50S ribosomal protein L25 [Thermodesulfobacterium sp. OPB45]
gi|334901386|gb|AEH22192.1| 50S ribosomal protein L25 [Thermodesulfobacterium geofontis OPF15]
Length = 201
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 17/192 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRK-LVGHLGRSFF 114
AI R G + K RK G +P+IV+ G H I+V+++++ L+ H G +
Sbjct: 8 AIKREKTGKEICKKLRKQGLIPAIVY----GPHF-QPLPIAVKSSELESALIKHKGETI- 61
Query: 115 VSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVF 174
LF+L++ + S K++ + + H TD +++ FL + + IDVPL F
Sbjct: 62 ---LFNLQLANGEPS-----KIQAILKDHQTHPVTDKIIHIDFLAIHEKETITIDVPLEF 113
Query: 175 RGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
G V G+ KGG L + + C VP I VD+S LD+ + D+KV +K
Sbjct: 114 IGKPV--GISKGGILEILLHELTIECLPSEVPDKITVDISNLDIGDVLHVKDIKVPKGIK 171
Query: 235 LLRSKDEPVCKI 246
++ + +E V I
Sbjct: 172 VVDNPEETVATI 183
>gi|126731994|ref|ZP_01747797.1| ribosomal protein L25 [Sagittula stellata E-37]
gi|126707526|gb|EBA06589.1| ribosomal protein L25 [Sagittula stellata E-37]
Length = 209
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R G + R+ G VP IVF GG+K +++ L+ L + F
Sbjct: 10 AQERTGTGKGAARAARRDGMVPGIVF-------GGDKEPLAINI-PFNVLLKRLKQGRFK 61
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S LF+L+V E VRV+ R V D P +V F+R + + + +P+ F
Sbjct: 62 STLFNLQVEGH-------EDVRVICRDVQRDIVKDLPTHVDFMRLRRTSKVNLFIPVEFI 114
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
++ +PG+RKGG L ++ V+ + A +P + VDL + + + D+ + K
Sbjct: 115 NEETAPGIRKGGVLTVVRPEVELVVTAGDIPEKVVVDLGNMQIGDIVHINDVTLPEGSKA 174
Query: 236 LRSKDEPVCKI---AGGRASD 253
++ + I +G +ASD
Sbjct: 175 TIDRNFVIANISAPSGLKASD 195
>gi|319403819|emb|CBI77403.1| 50S ribosomal protein L25 [Bartonella rochalimae ATCC BAA-1498]
Length = 208
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 54/89 (60%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K++VLP+ L D P++V FLR ++++ + +P+ F +D++PG+++GG LN ++
Sbjct: 71 QKIQVLPKDYQLDPVRDFPIHVDFLRISAKSIVHVHIPVHFLNEDIAPGIKRGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ A +P I++DLS + I
Sbjct: 131 HEIECTALAHAIPEAIEIDLSSYSIGDSI 159
>gi|417859353|ref|ZP_12504409.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens F2]
gi|338822417|gb|EGP56385.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens F2]
Length = 174
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 12/135 (8%)
Query: 95 ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLN 154
I++ TN++ K + H G + D++ + K++VLP+ L D ++
Sbjct: 16 IALSTNEVTKRI-HAGGFMTTVAIIDVDGK----------KIKVLPKDYQLDPVRDFTMH 64
Query: 155 VTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
V FLR L+ ++VP+ F ++ S ++ GG LN ++ TV+F CPA+ +P +I VDL+
Sbjct: 65 VDFLRVSGNTLVNVEVPVHFVNEEKS-DIKIGGVLNIVRHTVEFHCPANDIPEFITVDLA 123
Query: 215 ELDVEQKILAGDLKV 229
L + + ++K+
Sbjct: 124 GLKIGDNVHISNVKL 138
>gi|218660335|ref|ZP_03516265.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli IE4771]
Length = 152
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K +VLP+ L D ++V FLR + +++P+ F ++ S GL+ GG LN ++
Sbjct: 22 KKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSQGLKVGGVLNIVR 81
Query: 194 RTVKFLCPADIVPPYIDVDLS 214
+V+ CPAD +P + D+DLS
Sbjct: 82 HSVEVHCPADAIPEFFDIDLS 102
>gi|319406826|emb|CBI80459.1| 50S ribosomal protein L25 [Bartonella sp. 1-1C]
Length = 208
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 54/89 (60%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K++VLP+ L D P++V FLR ++++ + +P+ F +D++PG+++GG LN ++
Sbjct: 71 QKIQVLPKDYQLDPVRDFPIHVDFLRISAKSIVHVHIPVHFLNEDIAPGIKRGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ A +P I++DLS + I
Sbjct: 131 HEIECTALAHAIPEAIEIDLSSYSIGDSI 159
>gi|294678566|ref|YP_003579181.1| 50S ribosomal protein L25 [Rhodobacter capsulatus SB 1003]
gi|294477386|gb|ADE86774.1| 50S ribosomal protein L25 [Rhodobacter capsulatus SB 1003]
Length = 199
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 15/196 (7%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGR 111
ET++A R G + R+ G+VP IV+ G K +++ + KL+ L +
Sbjct: 6 ETLVAEVRTGTGKGAARAARREGKVPGIVY-------GDGKEPLAINLDY-NKLLTRLRK 57
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F+S LF+L + + + VRV+ R V D P ++ F+R + + + +
Sbjct: 58 GRFLSTLFNLHIEGQ-------DDVRVICRGVQKDVVKDLPTHIDFMRTHRASRINLFIH 110
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
+ F + SPGL++GG L ++ V+ A +P +I VDL+ ++ I D+ +
Sbjct: 111 VNFDNAEASPGLKRGGTLTIVRPEVELEVLAGDIPDHITVDLTGRNIGDVIHINDIPLPE 170
Query: 232 ALKLLRSKDEPVCKIA 247
K ++ V IA
Sbjct: 171 GCKPTIDRNFVVANIA 186
>gi|225677074|ref|ZP_03788079.1| ribosomal 5S rRNA E-loop binding protein [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590896|gb|EEH12118.1| ribosomal 5S rRNA E-loop binding protein [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 203
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 16/189 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI A R T+ RK G +P I++ G+ N L T ++
Sbjct: 8 TINAELRNVTKTKAVHSLRKKGNIPGIIY----GKGHDNVNL----TLSAKEFTKQYKSG 59
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ L +L + SG +K L R + LH D +V F + +KID+PL
Sbjct: 60 SLSAHLIELNI-----SG---KKEYALVRDIQLHVVKDTVQHVDFQFVDKGSEIKIDIPL 111
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F + +PG++ GG LN + R++ C D +P I+VDLS + Q I D+K+
Sbjct: 112 SFVNESKAPGIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEG 171
Query: 233 LKLLRSKDE 241
+K + ++E
Sbjct: 172 VKFVAHEEE 180
>gi|114707023|ref|ZP_01439922.1| 50S ribosomal protein L25 [Fulvimarina pelagi HTCC2506]
gi|114537573|gb|EAU40698.1| 50S ribosomal protein L25 [Fulvimarina pelagi HTCC2506]
Length = 232
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
EK++VLPR L D +V FLR + + +++P+ F ++ SPGL +GG LN ++
Sbjct: 71 EKIKVLPRDYQLDPVRDFLEHVDFLRVGEKTRVTVEIPVHFENEEESPGLERGGVLNVVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDV 218
V+ C A+ +P Y +DL+ ++
Sbjct: 131 HAVEVECSANSIPEYFTIDLTGTEI 155
>gi|399019855|ref|ZP_10721998.1| ribosomal protein L25, Ctc-form [Herbaspirillum sp. CF444]
gi|398096874|gb|EJL87189.1| ribosomal protein L25, Ctc-form [Herbaspirillum sp. CF444]
Length = 202
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A PR GT S + R AG+ P+IV+ GG +++ + L L +
Sbjct: 3 VIAFPRKEQGTGASRRLRNAGQTPAIVY-------GGTAAPLNIALDH-NALYHALKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLE+ + +VL R +H+ L+V F R + + VPL
Sbjct: 55 FHSSILDLEIDGKVE--------QVLLRDFQVHAYKQLVLHVDFQRVDASQKIHVKVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F +VSP ++ G ++ + + C +P ++ VDLS+L+V I DL++
Sbjct: 107 FVNAEVSPAVKLSSGIISHVMTDLDISCLPKDLPEFVSVDLSKLEVGHSIHLADLQL 163
>gi|124268412|ref|YP_001022416.1| 50S ribosomal protein L25/general stress protein Ctc [Methylibium
petroleiphilum PM1]
gi|166223695|sp|A2SKU2.1|RL25_METPP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|124261187|gb|ABM96181.1| LSU ribosomal protein L25P [Methylibium petroleiphilum PM1]
Length = 214
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 19/192 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
+A PR GT S + R +G+VP IV+ G I + N L L +
Sbjct: 3 FVAYPRELQGTGASRRLRISGKVPGIVYG------AGEPLKIELDHN---ALFHALKKEA 53
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + L D+E + +VL R V +H+ L+V F R + VPL
Sbjct: 54 FHASLLDMEFNGK--------SQQVLLRDVQMHAFRPQVLHVDFQRVDATTRVTKKVPLH 105
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F ++ +PG++ G ++ + ++ C A +P Y+ VDL EL Q + DLK+ P+
Sbjct: 106 FVNEENAPGVKLDKGLISHVVTELEVECLASQLPEYLTVDLGELAKGQSLHVNDLKLPPS 165
Query: 233 LK-LLRSKDEPV 243
+K +LR K PV
Sbjct: 166 VKVVLRGKKNPV 177
>gi|354595262|ref|ZP_09013296.1| 50S ribosomal protein L25/general stress protein Ctc
[Commensalibacter intestini A911]
gi|353671304|gb|EHD13009.1| 50S ribosomal protein L25/general stress protein Ctc
[Commensalibacter intestini A911]
Length = 220
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%)
Query: 139 LPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKF 198
L R V +H TD PL+V F R +++++P+ F G+D PG ++ G LNT+ +++
Sbjct: 78 LLRAVQMHPVTDRPLHVDFQRMVAGQHIRVEIPVHFVGEDECPGFKRDGVLNTVMHSIEI 137
Query: 199 LCPADIVPPYIDVDLSELDVEQKILAGDLK 228
C + +P DLS LD+ I LK
Sbjct: 138 NCDVENIPEAFIADLSGLDIHDTISWSQLK 167
>gi|88658579|ref|YP_506970.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia
chaffeensis str. Arkansas]
gi|109893362|sp|Q2GHW3.1|RL25_EHRCR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|88600036|gb|ABD45505.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ehrlichia
chaffeensis str. Arkansas]
Length = 210
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R + GT S R +G +P++++ G + +S+ + R+ V + + L
Sbjct: 14 RKNVGTGPSRALRLSGEIPAVIY-------GKGRDSLSISLSN-REFVSKYRSAALSTHL 65
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
+LE+ ++ K VL R V H TD +V F +KI+VPL+F +
Sbjct: 66 IELEIDNK--------KEYVLMRDVQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQ 117
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
G+++GG LN + RT+ C + I++DLS L I DLK+ P + +
Sbjct: 118 KCIGIKRGGVLNILHRTLSIKCSPKAILQNIEIDLSGLTTGHSIHVSDLKLPPEVNVTMK 177
Query: 239 KDEPVCKIAGGRASDQKKSK 258
+ P + AS +K+++
Sbjct: 178 EHNPAI-VTISSASTEKEAE 196
>gi|73666725|ref|YP_302741.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia
canis str. Jake]
gi|109893361|sp|Q3YT12.1|RL25_EHRCJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|72393866|gb|AAZ68143.1| LSU ribosomal protein L25P [Ehrlichia canis str. Jake]
Length = 209
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 16/184 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R + GT + R+ G +P++V+ G N+ +SV + R+ + + + L
Sbjct: 14 RENVGTGPARAVRRNGGIPAVVY-------GKNRDSLSVFLSD-REFLSKHRSAALSTHL 65
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
+LE+ GD +K VL R V H TD +V F +KI+VPL+F +
Sbjct: 66 IELEI------GD--KKEYVLMRDVQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQ 117
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
G+++GG LN + RT+ C + + I++DLS+L I DL + P + ++
Sbjct: 118 KCIGVKRGGVLNILHRTLSIKCLPNAILQNIEIDLSDLTAGHSIHVSDLNLPPEINVVMK 177
Query: 239 KDEP 242
+ P
Sbjct: 178 EHNP 181
>gi|77464403|ref|YP_353907.1| 50S ribosomal protein L25 [Rhodobacter sphaeroides 2.4.1]
gi|126463245|ref|YP_001044359.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter
sphaeroides ATCC 17029]
gi|221640293|ref|YP_002526555.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter
sphaeroides KD131]
gi|332559294|ref|ZP_08413616.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter
sphaeroides WS8N]
gi|429206040|ref|ZP_19197308.1| LSU ribosomal protein L25p [Rhodobacter sp. AKP1]
gi|109893390|sp|Q3IZM8.1|RL25_RHOS4 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166223710|sp|A3PMM1.1|RL25_RHOS1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|254801059|sp|B9KMG3.1|RL25_RHOSK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|77388821|gb|ABA80006.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides 2.4.1]
gi|126104909|gb|ABN77587.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides ATCC 17029]
gi|221161074|gb|ACM02054.1| 50S ribosomal protein L25 [Rhodobacter sphaeroides KD131]
gi|332277006|gb|EGJ22321.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter
sphaeroides WS8N]
gi|428190761|gb|EKX59305.1| LSU ribosomal protein L25p [Rhodobacter sp. AKP1]
Length = 203
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G + + R+ G VP IV+ GG + +S+ L+ L + F+ L
Sbjct: 13 RTGTGKGAARQARREGYVPGIVY-------GGGQEPLSINV-PYNDLLNRLKKGRFLQTL 64
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
F+L+V + E VRV+ R V D P +V F+R + + + + + F D
Sbjct: 65 FNLKVEGQ-------EDVRVICRGVQRDVVKDLPTHVDFMRLRRTSRVNLFIHVTFENHD 117
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+PGL++GG L ++ V+ A +P ++ VDL++ + I D+K+
Sbjct: 118 KAPGLKRGGTLTVVRPEVELEVTAGDIPDHLTVDLTDRQIGDVIHINDIKL 168
>gi|42520074|ref|NP_965989.1| 50S ribosomal protein L25 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|225629937|ref|YP_002726728.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia sp.
wRi]
gi|71153674|sp|Q73II9.1|RL25_WOLPM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|254801068|sp|C0R595.1|RL25_WOLWR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|42409811|gb|AAS13923.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Drosophila melanogaster]
gi|225591918|gb|ACN94937.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia sp.
wRi]
Length = 203
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 16/189 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI A R T+ RK G +P I++ G+ N L T ++
Sbjct: 8 TINAELRDITKTKAMHSLRKKGNIPGIIY----GKGHDNVNL----TLSAKEFTKQYKSG 59
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ L +L + SG +K L R + LH D +V F + +KID+PL
Sbjct: 60 SLSAHLIELNI-----SG---KKEYALVRDIQLHVVKDTVQHVDFQFVDKGSEIKIDIPL 111
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F + +PG++ GG LN + R++ C D +P I+VDLS + Q I D+K+
Sbjct: 112 SFVNESKAPGIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEG 171
Query: 233 LKLLRSKDE 241
+K + ++E
Sbjct: 172 VKFVAHEEE 180
>gi|118591923|ref|ZP_01549318.1| 50S ribosomal protein L25/general stress protein Ctc [Stappia
aggregata IAM 12614]
gi|118435566|gb|EAV42212.1| 50S ribosomal protein L25/general stress protein Ctc [Stappia
aggregata IAM 12614]
Length = 207
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 77/145 (53%), Gaps = 16/145 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P++++ G+K+ T +++ L + F++ + ++V E
Sbjct: 24 RREGLLPAVIY--------GDKKPALPITIPVKETTITLHKGGFLTHIGMIDVDGE---- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
K +V+ + LH D ++V FLR + L ++VP+ F ++ PG++KGG LN
Sbjct: 72 ----KHQVIAKDFQLHPVRDDVMHVDFLRVSKGSTLTVEVPVHFLNEETCPGIKKGGVLN 127
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSE 215
++ TV+ PAD +P +++DL++
Sbjct: 128 IVRHTVEMNVPADNIPEALEIDLAK 152
>gi|301092281|ref|XP_002996999.1| 50S ribosomal protein L25, putative [Phytophthora infestans T30-4]
gi|262112188|gb|EEY70240.1| 50S ribosomal protein L25, putative [Phytophthora infestans T30-4]
Length = 251
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 57 IPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR-LISVQTNQIRKLVGHLGRSFFV 115
+ R G+R S + RK G +P +++ + G+ G ++R L+S+ T + L S
Sbjct: 36 VVREGEGSRASRRLRKKGLLPGVLYGE--GEEGKDERMLVSLPTRAFEREHRKLWTSI-E 92
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+++F ++V GD V+ R V L TD PL V FLR P + +P+ +
Sbjct: 93 NQVFHVQV------GDH-PPVKAYMRDVQLDPVTDVPLAVNFLRFKPGR--TVSIPITYL 143
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
++ SPGL++GG++N I ++ D +P + +D++ L V K+ +K +
Sbjct: 144 NEEGSPGLKRGGFINHIHHSLDCTIFTDKIPITLQIDVNGLHVGDKVYLESIKFPEGVVP 203
Query: 236 LRSKDEPVCKIAGGRA 251
+ V KIAG R
Sbjct: 204 NIPEGSLVAKIAGRRG 219
>gi|146276403|ref|YP_001166562.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter
sphaeroides ATCC 17025]
gi|166223711|sp|A4WPE3.1|RL25_RHOS5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|145554644|gb|ABP69257.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides ATCC 17025]
Length = 203
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G + + R+ G VP IV+ GG + +S+ + L+ L + F+ L
Sbjct: 13 RTGTGKGAARQARREGYVPGIVY-------GGGQEPLSINV-KYNDLLNRLKKGRFLQTL 64
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
F+L+V + E VRV+ R V D P +V F+R + + + + + F D
Sbjct: 65 FNLKVEGQ-------EDVRVICRGVQRDVVKDLPTHVDFMRLRRTSRINLFIHVTFENHD 117
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
+PGL++GG L ++ V+ A +P +I VDL+
Sbjct: 118 QAPGLKRGGTLTVVRPEVELEVTAGDIPDHITVDLT 153
>gi|114777713|ref|ZP_01452673.1| 50S ribosomal protein L25 [Mariprofundus ferrooxydans PV-1]
gi|114551929|gb|EAU54463.1| 50S ribosomal protein L25 [Mariprofundus ferrooxydans PV-1]
Length = 208
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 86/171 (50%), Gaps = 18/171 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQ--IRKLVGHLGRSFFVS 116
R + G + + R+ G++P+I++ GG+K +SV + I KL L + F +
Sbjct: 11 RETNGRSATRRLRRTGKIPAIIY-------GGDKPDLSVAVDYFVISKL---LNQEEFHT 60
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
+ +++V+ G K V+ + D ++ F+R ++ +DVP+V
Sbjct: 61 SMLEVKVKGSRG------KNTVMLKATQWDPIKDTVTHLDFIRVSSSDMITLDVPVVAIN 114
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
+D PG+ KGG ++ I+ +++ AD +P +I++D S LD+ + D+
Sbjct: 115 EDKCPGVAKGGLIDVIRHSLEVTSRADSIPAHIEIDCSGLDIGDSVHIEDV 165
>gi|319898492|ref|YP_004158585.1| 50S ribosomal protein L25 [Bartonella clarridgeiae 73]
gi|319402456|emb|CBI75997.1| 50S ribosomal protein L25 [Bartonella clarridgeiae 73]
Length = 208
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 23/194 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFV 115
R G S K R+ G +P++++ GNK+ ISV +I + H G F
Sbjct: 12 RERVGKGSSRKLRRNGLIPAVIY--------GNKQPPLAISVPYKEIFYKI-HAGG--FR 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + +E+ + K++VLP+ L D P++V FLR +++ + +P+ F
Sbjct: 61 TTVATIEIDKQ--------KIQVLPKDYQLDPIRDFPIHVDFLRISATSVVHVHIPVHFL 112
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK- 234
+D++PG+++GG LN ++ ++ A +P I++DLS + I +++ +
Sbjct: 113 NEDMAPGIKRGGVLNIVRHEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVTP 172
Query: 235 LLRSKDEPVCKIAG 248
+++ +D + IA
Sbjct: 173 VIQERDFTIATIAA 186
>gi|373460258|ref|ZP_09552011.1| ribosomal protein L25, Ctc-form [Prevotella maculosa OT 289]
gi|371955905|gb|EHO73701.1| ribosomal protein L25, Ctc-form [Prevotella maculosa OT 289]
Length = 204
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 21/195 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVF-EQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSR 117
R S G + S + RK G +P ++ E++D SV +++RK++ +
Sbjct: 11 RNSLGKKASKELRKQGFIPCNIYGEKKDDNGNPIAHAFSVSFSELRKII-------YTPH 63
Query: 118 LF--DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
++ +L++ E + L +++ H TD PL+V F + + I +P+
Sbjct: 64 IYVINLDIEGEHYTSIL--------KEIQFHPVTDTPLHVDFYEVNDQKPITIGIPVKLV 115
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G ++ G+R GG +N R + P +P ++D+D++ L + + I G+L L++
Sbjct: 116 G--LAQGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELTFE-GLEV 172
Query: 236 LRSKDEPVCKIAGGR 250
SKD VC I R
Sbjct: 173 ATSKDVVVCSIKMTR 187
>gi|126735034|ref|ZP_01750780.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter
sp. CCS2]
gi|126715589|gb|EBA12454.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter
sp. CCS2]
Length = 221
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G + + R+ G VP IV+ G + + I + N L+ L + F+S L
Sbjct: 13 RAGTGKGAARQARRDGDVPGIVY-----GGGADPQSIIIPFNY---LLTKLRKGGFMSTL 64
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
+L++ E E VRV+ R V D P ++ +R + + I +P+ F +
Sbjct: 65 HNLKIEGE-------EDVRVICRGVQRDVVKDLPTHIDLMRLKRTSRVNIFIPVEFLNAE 117
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
PG++KGG L ++ V+ A +P +I++DL+E+++ I D+
Sbjct: 118 TCPGVKKGGVLTVVRNEVELNVLAGDIPEHIEIDLTEVEIGDTISISDV 166
>gi|335042005|ref|ZP_08535032.1| ribosomal protein L25 [Methylophaga aminisulfidivorans MP]
gi|333788619|gb|EGL54501.1| ribosomal protein L25 [Methylophaga aminisulfidivorans MP]
Length = 234
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
+ A R G S + R AG+VP++V+ G K +S+ + + + HL
Sbjct: 18 VQAEARTDEGKGASRRLRHAGKVPAVVY-------GAEKEPVSIALDH-NQFIRHLAEEA 69
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPL-NVTFLRAPPEALLKIDVPL 172
F + + L + + K +V+ + + H D + + FLR + + + VPL
Sbjct: 70 FYAHILTLNIGKK--------KEQVVLKDLQRHPANDNKIIHADFLRVDAKHEMTMTVPL 121
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
F G++ + G++ GG ++ + V+ C PAD+ P +I+VD+S+L+++ I +L
Sbjct: 122 HFIGEEKAVGVKAGGVVSHVMTEVEIACLPADL-PEFIEVDISKLELDHAIHLSEL 176
>gi|388569481|ref|ZP_10155873.1| 50S ribosomal protein L25/general stress protein Ctc
[Hydrogenophaga sp. PBC]
gi|388263230|gb|EIK88828.1| 50S ribosomal protein L25/general stress protein Ctc
[Hydrogenophaga sp. PBC]
Length = 209
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
+A RA GT S + R GR P IVF GG +S++ + L L +
Sbjct: 3 FVAFERAKQGTGASRRLRITGRAPGIVF-------GGTAAPVSIELDH-NALWHALKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + D+E+ G +EKV L R V H L+V F R + L+ VPL
Sbjct: 55 FHASILDMEL------GGKVEKV--LLRDVQYHPFKPQVLHVDFQRVDDKTRLRKKVPLH 106
Query: 174 FRGDDVSPGLRKGGYL-NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F G + SP ++ L N + ++ C A +P I VDLS++ + AGD+K+
Sbjct: 107 FTGAEESPAVKLDKCLVNHVINEIEIECLATQLPENITVDLSQVTKGATVHAGDIKLPKG 166
Query: 233 LKLL 236
+K++
Sbjct: 167 VKIV 170
>gi|395767352|ref|ZP_10447887.1| 50S ribosomal protein L25 [Bartonella doshiae NCTC 12862]
gi|395414665|gb|EJF81107.1| 50S ribosomal protein L25 [Bartonella doshiae NCTC 12862]
Length = 206
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 55/89 (61%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K+ VLP+ L D P++V FLR ++++ +++P+ F ++++PG+++GG LN ++
Sbjct: 71 QKISVLPKDYQLDPVRDFPMHVDFLRISAKSIVDVNIPVHFLNEEIAPGIKQGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ A+ +P I++DLS + I
Sbjct: 131 HEIECTALANAIPEAIEIDLSNCSIGDSI 159
>gi|359408729|ref|ZP_09201197.1| ribosomal protein L25, Ctc-form [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356675482|gb|EHI47835.1| ribosomal protein L25, Ctc-form [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 211
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 95 ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLN 154
I ++ +R+++ G RL D+ V VL R + +H TD PL+
Sbjct: 43 IEMEERVVRRVIHEPG---IFGRLLDINVEGN--------TTTVLTRDIQMHPVTDEPLH 91
Query: 155 VTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
+ LR + + + VP+ F + SPGL+ GG LN ++ V+ CPA +P I VDL
Sbjct: 92 LDMLRVGKSSTVAVGVPVEFINHEKSPGLKIGGVLNIVRHEVEMNCPAGNIPEKITVDLD 151
Query: 215 ELDVEQKI 222
+ + + I
Sbjct: 152 GVKIGETI 159
>gi|407786492|ref|ZP_11133637.1| 50S ribosomal protein L25/general stress protein Ctc [Celeribacter
baekdonensis B30]
gi|407201213|gb|EKE71214.1| 50S ribosomal protein L25/general stress protein Ctc [Celeribacter
baekdonensis B30]
Length = 206
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A RA G + + R+ G VP IV+ G +K + + L+ L
Sbjct: 8 LIATVRAGTGKGAARQARRDGFVPGIVY-------GDDKEPMPINL-PFNVLLKRLKAGR 59
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F+S LF+L+V + + VRV+ R V D P +V F+R + + + +P+
Sbjct: 60 FLSTLFNLKVEGQ-------DDVRVICRGVQRDVVKDLPTHVDFMRLHRNSRINLFIPVE 112
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
G++VSPG++KGG + ++ V+ + A +P +I +D+S+ + D+++
Sbjct: 113 IVGEEVSPGIKKGGVVTHVRTEVELIVTAADIPDHITLDISKGTIGDVYHISDIELPKGT 172
Query: 234 KLLRSKDEPVCKI---AGGRASD 253
K + +D + I AG +SD
Sbjct: 173 KAVIDRDFVIANITAPAGLGSSD 195
>gi|431932402|ref|YP_007245448.1| 50S ribosomal protein L25 [Thioflavicoccus mobilis 8321]
gi|431830705|gb|AGA91818.1| ribosomal protein L25, Ctc-form [Thioflavicoccus mobilis 8321]
Length = 206
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 22/202 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGR 111
++ PR G S + R+ G+VP+IV+ GG++ +ISV ++ L+ HL
Sbjct: 7 VIGQPRHDTGKGASRRLRRTGQVPAIVY-------GGHQEPEMISVSHSE---LLRHLNN 56
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + DL+V +V+ + + H L+V F R +++ VP
Sbjct: 57 EAFYSHVLDLQVGER--------NTKVVLKDMQRHPAKPFILHVDFQRVSAGEKIRMVVP 108
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
L F + S G++ GG ++ V+ C +P +I +D++E+D+ I ++ +
Sbjct: 109 LHFENEQQSKGVKLGGRVSHSVTEVEISCLPKDLPEFIAIDMTEMDIGDVIHLSEIPLPA 168
Query: 232 ALKLLRS--KDEPVCKIAGGRA 251
++L + DEPV + G +
Sbjct: 169 GVELAHAPDPDEPVVILHSGHS 190
>gi|163761599|ref|ZP_02168670.1| 50S ribosomal protein L25 [Hoeflea phototrophica DFL-43]
gi|162281195|gb|EDQ31495.1| 50S ribosomal protein L25 [Hoeflea phototrophica DFL-43]
Length = 234
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 135 KVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKR 194
K VLP+ L D ++V FLR + +++P+ F ++ SPG+++GG LN ++
Sbjct: 95 KYSVLPKDYQLDPVRDFLMHVDFLRISKNTQVTVEIPVHFENEEKSPGIKRGGVLNVVRH 154
Query: 195 TVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK----VHPAL 233
TV+ CPA+ +P + VDL+ L+V + + VHP +
Sbjct: 155 TVECNCPANSIPEALIVDLTGLEVGDGVHISHVTLPEGVHPTI 197
>gi|296134847|ref|YP_003642089.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thiomonas
intermedia K12]
gi|410692376|ref|YP_003622997.1| putative 50S ribosomal protein L25 (General stress protein CTC)
rplY [Thiomonas sp. 3As]
gi|294338800|emb|CAZ87134.1| putative 50S ribosomal protein L25 (General stress protein CTC)
rplY [Thiomonas sp. 3As]
gi|295794969|gb|ADG29759.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thiomonas
intermedia K12]
Length = 205
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 21/179 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R+ GT S + R+AG+ P I++ GG + ++I + N + L +
Sbjct: 3 VVAFERSLQGTGASRRLRRAGKTPGIIY-------GGEQAPQMIELDHNALYHA---LKK 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + LE+ + +VL R +H L+V F R + + VP
Sbjct: 53 EQFHSSVLQLEIAGK--------SSQVLLRDYQMHPFKQLVLHVDFQRVDAGHKISMKVP 104
Query: 172 LVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
L F G + SP ++ G +N + V+ C +P +I+VDLSEL + Q + DLK+
Sbjct: 105 LHFTGAENSPAVKLSHGLVNHVMTEVEVSCLPSELPEFIEVDLSELVLHQSVHVNDLKL 163
>gi|312797356|ref|YP_004030278.1| 50S ribosomal protein L25 [Burkholderia rhizoxinica HKI 454]
gi|312169131|emb|CBW76134.1| LSU ribosomal protein L25P [Burkholderia rhizoxinica HKI 454]
Length = 205
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 17/183 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R+ GT S + R AG+ P IV+ G +LI + N + L +
Sbjct: 3 VVAFERSQQGTGASRRLRNAGKTPGIVYGA-----GTEPKLIELDHNALYHA---LNKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLE+ G+ + +VL R V H L+V F R + + + VPL
Sbjct: 55 FHSSILDLEIA---GATE-----QVLLRDVQYHPFRRLVLHVDFQRVDAKTKITVKVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
+ + SP ++ GG + + ++ C +P +I+VDL+ ++ Q + A D+K+
Sbjct: 107 YMNQEGSPAVKLGGGVITHVLNEIEVSCLPGNLPEFIEVDLANFELNQSLHAKDVKLPAG 166
Query: 233 LKL 235
++L
Sbjct: 167 VEL 169
>gi|73540047|ref|YP_294567.1| 50S ribosomal protein L25 [Ralstonia eutropha JMP134]
gi|109893384|sp|Q476G0.1|RL25_RALEJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|72117460|gb|AAZ59723.1| LSU ribosomal protein L25P [Ralstonia eutropha JMP134]
Length = 203
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 27/194 (13%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGG--NKRLISVQTNQIRKLVGHLGR 111
++A R+ GT S + R +G+ P I++ GG + ++I + N + L +
Sbjct: 3 VVAFERSVQGTGASRRLRNSGKTPGIIY-------GGAADPKMIELDHNALWHA---LKK 52
Query: 112 SFFVSRLFDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
F S + DLEV +SE + L R +H L+V F R + +
Sbjct: 53 EAFHSSILDLEVAGKSE----------KALLRAFQMHPFKPLVLHVDFQRVSANDKIHVK 102
Query: 170 VPLVFRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
VPL F + +PG++ G G +N I ++ C PAD+ P +I+VD+ ++V Q + DL
Sbjct: 103 VPLHFMNQETAPGVKLGHGLVNHIVNDLEVSCLPADL-PEFIEVDVGNMEVGQTLHLTDL 161
Query: 228 KVHPALKLLRSKDE 241
K+ + ++ DE
Sbjct: 162 KLPKGVTVVTHGDE 175
>gi|348618506|ref|ZP_08885030.1| 50S ribosomal protein L25 (General stress protein CTC) [Candidatus
Glomeribacter gigasporarum BEG34]
gi|347816231|emb|CCD29786.1| 50S ribosomal protein L25 (General stress protein CTC) [Candidatus
Glomeribacter gigasporarum BEG34]
Length = 208
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 19/193 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R+ GT S + R++G+ P I++ G +LI++ N L L +
Sbjct: 3 VIAQSRSQQGTGASRRLRRSGKTPGIIYGA-----GSAPQLIALDQN---ALFHALEKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + DLE+ G+ VL R V H A L++ F R E + VPL
Sbjct: 55 FHASILDLELD---GASQ-----PVLLRDVQRHPFKPAVLHIDFQRVEAEKKIHKKVPLH 106
Query: 174 FRGDDVSPGLRKGGYLNT-IKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV--H 230
+ ++S ++ GG + T + ++ +C +P +I+VDLSEL Q + D+ + H
Sbjct: 107 YLNQEISKAVKLGGAIITHVMTEIEIICLPAHLPEFIEVDLSELSAGQSLHIKDVSLPSH 166
Query: 231 PALKLLRSKDEPV 243
L L S++ PV
Sbjct: 167 VELALYLSQENPV 179
>gi|110634506|ref|YP_674714.1| 50S ribosomal protein L25/general stress protein Ctc [Chelativorans
sp. BNC1]
gi|123057768|sp|Q11GC6.1|RL25_MESSB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|110285490|gb|ABG63549.1| LSU ribosomal protein L25P [Chelativorans sp. BNC1]
Length = 210
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 57/89 (64%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
EK++VLP+ L ++V FLR ++ ++VP+ F D+ +PG+++GG LN ++
Sbjct: 71 EKIQVLPKDYQLDPVRGFAMHVDFLRVGKNTVVTVNVPVHFINDEKAPGIKRGGVLNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKI 222
V+F CPA+ +P +I+VDL+ LD+ +
Sbjct: 131 HEVEFTCPANAIPDFIEVDLTGLDIGDSV 159
>gi|398831927|ref|ZP_10590096.1| ribosomal protein L25, Ctc-form [Herbaspirillum sp. YR522]
gi|398224089|gb|EJN10414.1| ribosomal protein L25, Ctc-form [Herbaspirillum sp. YR522]
Length = 201
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I+ PR GT S + R AG+ P IV+ GG +++ + L L +
Sbjct: 3 IIGFPRKEQGTGASRRLRIAGQTPGIVY-------GGTAAPVNIALDH-NALYHALKKET 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + DLE+ + +VL R +H+ L+V F R L VPL
Sbjct: 55 FHASILDLEIEGKVE--------QVLLRDFQVHAFKQLVLHVDFQRVDASQKLHTKVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F ++SP ++ G ++ ++ + C +P +I+VDL+ L + Q I DLK+
Sbjct: 107 FVNAEISPAVKLSSGIVSHVQSELDVQCLPKNLPEFIEVDLANLQIGQSIHLADLKL 163
>gi|387131035|ref|YP_006293925.1| 50S ribosomal protein L25 [Methylophaga sp. JAM7]
gi|386272324|gb|AFJ03238.1| LSU ribosomal protein L25p [Methylophaga sp. JAM7]
Length = 228
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 87/175 (49%), Gaps = 17/175 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
+ A R G S + R+AG+VP++V+ G K+ +S+ + + + HL
Sbjct: 7 VHAEARTDEGKGASRRLRRAGKVPAVVY-------GTEKKPVSISLDH-NQFIRHLAEEA 58
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPL-NVTFLRAPPEALLKIDVPL 172
F + + +L + + K +V+ + + H D + + FLR + + + V L
Sbjct: 59 FYAHILNLVIDGK--------KNQVVLKDLQRHPANDNKIIHADFLRVDAKHEMTMTVQL 110
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
F +D +PG++ GG ++ + V+ C +P YI+VD+++L++++ I +L
Sbjct: 111 HFVNEDKAPGVKAGGQVSHLITEVEIACLPKDLPEYIEVDVAKLEMDEYIHLSEL 165
>gi|333369959|ref|ZP_08462043.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Psychrobacter
sp. 1501(2011)]
gi|332968801|gb|EGK07849.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Psychrobacter
sp. 1501(2011)]
Length = 225
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 21/184 (11%)
Query: 63 GTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGRSFFVSRLFD 120
G S + RK VP+I++ GGN+ I+++ N++ KL L F S +
Sbjct: 19 GKGASRRLRKQNLVPAIIY-------GGNEEPTAIAIKNNELWKL---LENEAFFSNILT 68
Query: 121 LEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVS 180
+ + E E + V+ + + H P++ F R + +++P+ F G + +
Sbjct: 69 INLDGE-------EHLAVI-KDLQRHPSKGFPMHADFQRIVKGQKINMNIPVHFVGREEA 120
Query: 181 PGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR-SK 239
PG++ GG L+T+ ++ +C +P Y++VD+S L++ + + D+K+ + +
Sbjct: 121 PGIKAGGILSTLVTDIEIVCLPSALPEYLEVDVSGLEIGESLHLTDIKLPEGVIIFELDV 180
Query: 240 DEPV 243
DEPV
Sbjct: 181 DEPV 184
>gi|68171276|ref|ZP_00544677.1| Ribosomal protein L25 [Ehrlichia chaffeensis str. Sapulpa]
gi|67999291|gb|EAM85939.1| Ribosomal protein L25 [Ehrlichia chaffeensis str. Sapulpa]
Length = 189
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 17/188 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R +G +P++++ G + +S+ + R+ V + + L +LE+ ++
Sbjct: 5 RLSGEIPAVIY-------GKGRDSLSISLSN-REFVSKYRSAALSTHLIELEIDNK---- 52
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
K VL R V H TD +V F +KI+VPL+F + G+++GG LN
Sbjct: 53 ----KEYVLMRDVQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGIKRGGVLN 108
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGR 250
+ RT+ C + I++DLS L I DLK+ P + + + P +
Sbjct: 109 ILHRTLSIKCSPKAILQNIEIDLSGLTTGHSIHVSDLKLPPEVNVTMKEHNPAI-VTISS 167
Query: 251 ASDQKKSK 258
AS +K+++
Sbjct: 168 ASTEKEAE 175
>gi|152980425|ref|YP_001354819.1| 50S ribosomal protein L25 [Janthinobacterium sp. Marseille]
gi|166223690|sp|A6T2S2.1|RL25_JANMA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|151280502|gb|ABR88912.1| large subunit ribosomal protein L25 [Janthinobacterium sp.
Marseille]
Length = 214
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S ++R AG P IV+ GG +++ + L L +
Sbjct: 3 VIAFARKELGTGASRRQRIAGLTPGIVY-------GGTAAPVNISLDH-NALYHALKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + +VL R +H+ L+ F R + + + VPL
Sbjct: 55 FHSSILDLEVDGKVE--------QVLLRDFQVHAYKQLVLHADFQRVDAKQKIHVKVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
F + SP ++ GG ++ + + C P+D+ P +++VDL+ LDV I D+K+
Sbjct: 107 FVNAETSPAVKLHGGIISHVASELDITCLPSDL-PEFVEVDLANLDVGHSIHLADIKL 163
>gi|429768221|ref|ZP_19300387.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta 470-4]
gi|429189363|gb|EKY30200.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta 470-4]
Length = 204
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 52 ETILAIP-RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLG 110
E IL + R + GT + R+ G VP +++ GG+K +++ N+
Sbjct: 3 EIILNVDVRENVGTGGARAARRDGAVPGVLY-------GGDKAPVAISVNE-----REFR 50
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
+S + +L V ++G E V+ + + +D PL+ +R + +KID+
Sbjct: 51 KSLYTGKLIGHLVTLKYGK----ETQPVIAKDIQFDPVSDRPLHFDLMRVGAKEEIKIDI 106
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
P+ F D +P R+GG L ++ TV+ + AD +P + VDL ++ + I D+++
Sbjct: 107 PVAFINADEAPYTRQGGMLEVVRHTVEIMVRADRIPAELVVDLKGREIGENIRISDIQL 165
>gi|319405260|emb|CBI78871.1| 50S ribosomal protein L25 [Bartonella sp. AR 15-3]
Length = 205
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K++VLP+ L D P++V FLR ++++ + +P+ F +D +PG+++GG LN ++
Sbjct: 71 QKIQVLPKDYQLDPVRDFPIHVDFLRISAKSVVHVHIPVHFLNEDTAPGIKRGGILNIVR 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK-LLRSKDEPVCKIAG 248
++ A +P I++DLS + I +++ + +++ +D + IA
Sbjct: 131 HEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVTPVIQERDFTIATIAA 186
>gi|28199877|ref|NP_780191.1| 50S ribosomal protein L25 [Xylella fastidiosa Temecula1]
gi|182682629|ref|YP_001830789.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella
fastidiosa M23]
gi|386083962|ref|YP_006000244.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella
fastidiosa subsp. fastidiosa GB514]
gi|417557352|ref|ZP_12208391.1| Ribosomal protein L25 (general stress protein Ctc) RplY [Xylella
fastidiosa EB92.1]
gi|71153679|sp|Q87A23.1|RL25_XYLFT RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226694604|sp|B2IA79.1|RL25_XYLF2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|28057998|gb|AAO29840.1| 50S ribosomal protein L25 [Xylella fastidiosa Temecula1]
gi|182632739|gb|ACB93515.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xylella
fastidiosa M23]
gi|307578909|gb|ADN62878.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella
fastidiosa subsp. fastidiosa GB514]
gi|338180016|gb|EGO82923.1| Ribosomal protein L25 (general stress protein Ctc) RplY [Xylella
fastidiosa EB92.1]
Length = 207
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLG 110
+ I A R G S + R AG +P+I++ GG +R +S+Q N + +
Sbjct: 3 NHQIKAQRRKDEGKGASRRLRHAGMIPAIIY-------GGEQRPVSIQLNHEQIWLAQQN 55
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
F+ S + DL V G+G +VL R + H ++V F R +A L + V
Sbjct: 56 EWFY-SSILDLNVD---GAG----AEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAV 107
Query: 171 PLVFRGDDVSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
PL F SP + GG + T + V+ C +P +I+VDLS L+V I D+
Sbjct: 108 PLHFINQATSPAGKVGGVVITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHLSDI 165
>gi|430809763|ref|ZP_19436878.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
sp. HMR-1]
gi|429497787|gb|EKZ96310.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
sp. HMR-1]
Length = 203
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 27/194 (13%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R+ GT S + R +G+ P I++ GG ++I + N + L +
Sbjct: 3 VIAFERSVQGTGASRRLRNSGKTPGIIY-------GGAAEPKMIELDHNALWHA---LKK 52
Query: 112 SFFVSRLFDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
F S + DLEV +SE + L R +H L+V F R + +
Sbjct: 53 EAFHSSILDLEVAGKSE----------KALLRAFQMHPFKPLVLHVDFQRVSASEKIHVK 102
Query: 170 VPLVFRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
VPL F + +PG++ G G ++ I ++ C PAD+ P +I+VDL+ ++ Q I DL
Sbjct: 103 VPLHFMNQETAPGVKLGHGIVSHILNDLEVSCLPADL-PEFIEVDLAAAELNQTIHLSDL 161
Query: 228 KVHPALKLLRSKDE 241
K+ + + DE
Sbjct: 162 KLPKGVTAITHGDE 175
>gi|421746701|ref|ZP_16184478.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
necator HPC(L)]
gi|409774740|gb|EKN56317.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
necator HPC(L)]
Length = 203
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 23/180 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R+ GT S + R AG+ P I++ GG ++I + N L L +
Sbjct: 3 VIAFERSVQGTGASRRLRNAGKTPGIIY-------GGTAEPKMIELDHN---ALFHALKK 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + DLEV G EK L R +H L+V F R + + VP
Sbjct: 53 EAFHSSILDLEV------GGTTEKA--LLRAFQMHPFKPLVLHVDFQRVSATEKIHVKVP 104
Query: 172 LVFRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
L F + +PG++ G G +N I ++ C P D+ P +I+VD+ +++ Q + DLK+
Sbjct: 105 LHFMNQETAPGVKLGHGIINHILNELEVSCLPGDL-PEFIEVDMGAVELGQTVHLSDLKL 163
>gi|427430892|ref|ZP_18920606.1| LSU ribosomal protein L25p [Caenispirillum salinarum AK4]
gi|425878383|gb|EKV27100.1| LSU ribosomal protein L25p [Caenispirillum salinarum AK4]
Length = 180
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Query: 90 GNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGT 149
GNK+ + R L+ L +S F +R+F L V E G+ + V+ V + T
Sbjct: 7 GNKQPTELVAMDPRPLIAELHKSGFNTRVFTLNV--EGGNSE-----TVMVHDVQFNPVT 59
Query: 150 DAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYI 209
D P V FLR + + + VP F ++ SPG+++GG LN ++ V+ A +P I
Sbjct: 60 DDPQAVDFLRVSADKEVVVSVPTSFVNEEKSPGIKRGGVLNVVRHEVEVKGKATGLPETI 119
Query: 210 DVDLSELDVEQKI 222
+ DL+ LDV +
Sbjct: 120 ECDLTGLDVNDSL 132
>gi|340028517|ref|ZP_08664580.1| 50S ribosomal protein L25/general stress protein Ctc [Paracoccus
sp. TRP]
Length = 207
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
++A R G + + R+ G+VP IV+ G + I+++ N L+ L
Sbjct: 7 NLVAEARTGTGKGAARQARREGKVPGIVYGD-----GKEPQPIALEFNY---LLTKLRAG 58
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F+S L++L+V + E VRV+ R V D P ++ F+R + + + +
Sbjct: 59 RFMSTLWNLKVEGQ-------EDVRVVCRGVQRDVVKDLPTHIDFMRVHRNTRVNLFINV 111
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F + +PGL++GG L ++ V+ + A +P I VDL+ ++ + I D+++
Sbjct: 112 HFENHEQAPGLKRGGTLVVVRPEVELMVTASDIPEQITVDLTGREIGESIHINDVQLPRG 171
Query: 233 LKLLRSKDEPVCKIA---GGRASDQ 254
+K ++ + IA G R+SD
Sbjct: 172 VKPTIDRNFVIANIAAPSGLRSSDN 196
>gi|300726453|ref|ZP_07059899.1| ribosomal protein L25, Ctc-form [Prevotella bryantii B14]
gi|299776181|gb|EFI72745.1| ribosomal protein L25, Ctc-form [Prevotella bryantii B14]
Length = 197
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 17/193 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSR 117
R + G + S RK G VP ++ ++ ++G +V ++RK++ + + ++
Sbjct: 11 RENLGKKASKALRKEGFVPCNLYGEKKDENGAPVAFSFAVSFKELRKII-YTPHVYVINL 69
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
+ D E + + +++ H TDAPL+V F + + I +P+ G
Sbjct: 70 IIDGESHT------------AIMKEIQFHPTTDAPLHVDFYEVNDQKPITIGIPVKLNG- 116
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
++ G+R GG +N R + P +P ++D+D++ L + + I G+L L+L
Sbjct: 117 -LAQGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSFE-GLELAT 174
Query: 238 SKDEPVCKIAGGR 250
K+ VC I R
Sbjct: 175 PKEVVVCSIKMTR 187
>gi|354604135|ref|ZP_09022128.1| 50S ribosomal protein L25, Ctc-form [Alistipes indistinctus YIT
12060]
gi|353348567|gb|EHB92839.1| 50S ribosomal protein L25, Ctc-form [Alistipes indistinctus YIT
12060]
Length = 191
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I + RA G + S RK G +P ++ + + H SV ++ L+ + +S+
Sbjct: 6 IAGVKRADFGKKESKHIRKEGMIPCTIYGRGETVH------FSVDAKAVKPLI-YTPQSY 58
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
V FD+E + E G + R+V H D L++ F P + IDVP+
Sbjct: 59 LVE--FDIEGQKEVG----------VMREVQYHPVKDNVLHIDFYHVVPGKPISIDVPVR 106
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
G+ S G+++GG L KR V+ + +P I VD++ L + + I GDL+ + +
Sbjct: 107 LTGN--SEGVKQGGKLILSKRKVRISATMENLPDEIVVDVTTLGLGKSIFVGDLQ-YDNI 163
Query: 234 KLLRSKDEPVCKI 246
LL VC +
Sbjct: 164 TLLTPASTAVCAV 176
>gi|71909343|ref|YP_286930.1| 50S ribosomal protein L25 [Dechloromonas aromatica RCB]
gi|109893357|sp|Q479M1.1|RL25_DECAR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71848964|gb|AAZ48460.1| LSU ribosomal protein L25P [Dechloromonas aromatica RCB]
Length = 203
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 17/183 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT S + R A +VP IV+ GG S++ + L+ L + F
Sbjct: 7 AQARTLQGTGASRRLRHAAKVPGIVY-------GGAAAPQSIEVDH-NDLLLKLKKEAFH 58
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S + +L + + K +VL R +H+ L+V F R L + VPL F
Sbjct: 59 SSIINLIIDGK--------KEQVLLRDTQVHAYKPLVLHVDFQRVDATHELHVKVPLHFV 110
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
++V+PG++ GG +N + V C A +P +I+VDLS L + I LK+ +K
Sbjct: 111 NEEVAPGVKLNGGLVNHVMTEVDIQCLAGDLPEFIEVDLSSLKIGGSIHLSQLKLPKGVK 170
Query: 235 LLR 237
++
Sbjct: 171 IVH 173
>gi|406979974|gb|EKE01656.1| hypothetical protein ACD_21C00082G0006 [uncultured bacterium]
Length = 242
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 20/196 (10%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
I+A R+ G S + R+A +VP IV+ G K +V + L+ L
Sbjct: 6 AIIATARSDMGKGASRRLRRAEQVPGIVY-------GAGKDAAAVTIDH-SLLLRLLASE 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F +++ DL++ + K V+ R + H L++ R + + +PL
Sbjct: 58 SFYTQILDLDIGGK--------KEHVILRDLQRHPFKPRILHIDLQRISATEKIAMRIPL 109
Query: 173 VFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
F G +++PG++ GG ++ + ++ C +P +I+VDLS L++ Q I DLK+ P
Sbjct: 110 HFTGAELAPGVKLSGGLISRLMSDIEVRCFPKDLPEFIEVDLSTLEINQTIHLSDLKLAP 169
Query: 232 ALKLL---RSKDEPVC 244
++++ +D PV
Sbjct: 170 GIEIVAITHGEDSPVA 185
>gi|94309233|ref|YP_582443.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
metallidurans CH34]
gi|166223709|sp|Q1LRQ2.1|RL25_RALME RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|93353085|gb|ABF07174.1| 50S ribosomal protein L25 (General stress protein CTC) [Cupriavidus
metallidurans CH34]
Length = 203
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 27/194 (13%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R+ GT S + R +G+ P I++ GG ++I + N + L +
Sbjct: 3 VVAFERSVQGTGASRRLRNSGKTPGIIY-------GGAAEPKMIELDHNALWHA---LKK 52
Query: 112 SFFVSRLFDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
F S + DLEV +SE + L R +H L+V F R + +
Sbjct: 53 EAFHSSILDLEVAGKSE----------KALLRAFQMHPFKPLVLHVDFQRVSATEKIHVK 102
Query: 170 VPLVFRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
VPL F + +PG++ G G ++ I ++ C PAD+ P +I+VDL+ ++ Q I DL
Sbjct: 103 VPLHFMNQETAPGVKLGHGIVSHILNDLEVSCLPADL-PEFIEVDLAAAELNQTIHLSDL 161
Query: 228 KVHPALKLLRSKDE 241
K+ + + DE
Sbjct: 162 KLPKGVTAITHGDE 175
>gi|317502723|ref|ZP_07960834.1| 50S ribosomal protein L25 [Prevotella salivae DSM 15606]
gi|315666167|gb|EFV05723.1| 50S ribosomal protein L25 [Prevotella salivae DSM 15606]
Length = 204
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGG-NKRLISVQTNQIRKLVGHLGRSFFVSR 117
R G + S + RK G +P ++ ++ G ++ +++RK++ +
Sbjct: 11 RTDLGKKASKELRKQGFIPCNLYGEKKNADGKPEAHAFTIAFSELRKII-------YTPH 63
Query: 118 LF--DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
++ +L + E + L +++ H TDAPL+V F + + I +P+
Sbjct: 64 IYVINLNIEGEHHTAIL--------KEIQFHPVTDAPLHVDFYEVNDQKPINIGIPVKLT 115
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G ++ G+R GG +N R + P +P ++D+D++ L + + I G+L L++
Sbjct: 116 G--LAQGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSFE-GLEI 172
Query: 236 LRSKDEPVCKIAGGR 250
SKD VC + R
Sbjct: 173 TTSKDVVVCSVKMTR 187
>gi|237654284|ref|YP_002890598.1| 50S ribosomal protein L25/general stress protein Ctc [Thauera sp.
MZ1T]
gi|237625531|gb|ACR02221.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thauera sp.
MZ1T]
Length = 200
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 20/195 (10%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R + GT S + R+AGR+P I++ G + +S+ N++ L L + F
Sbjct: 7 ATKRDAQGTGASRRLRRAGRIPGILYGG-----AGETQPVSMDHNELYHL---LRKEAFH 58
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + +EV K + R V H L++ F R + + VPL F
Sbjct: 59 ASVLSIEVDGA--------KQNAVLRDVQWHPFKQQVLHLDFQRIAAGEKMHLKVPLHFV 110
Query: 176 GDDVSPGLRKGGYL--NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
G DV+P ++ GG + +TI P D+ P +I+VDLS L+ Q + +K+ +
Sbjct: 111 GADVAPAVKLGGCMISHTINELDVQCLPTDL-PEFIEVDLSALEAGQSVHVSQIKLPAGV 169
Query: 234 KLLRSKD-EPVCKIA 247
+L++ + +PV A
Sbjct: 170 ELVQHGEGDPVVATA 184
>gi|329890236|ref|ZP_08268579.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta ATCC 11568]
gi|328845537|gb|EGF95101.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta ATCC 11568]
Length = 205
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 52 ETILAIP-RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLG 110
E IL + R + GT + R+ G VP +++ GG+K +++ N+
Sbjct: 3 EIILNVDVRENVGTGGARAARREGAVPGVLY-------GGDKAPVAISVNE-----REFR 50
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
+S + +L V ++G E V+ + + +D PL+ +R + +KI++
Sbjct: 51 KSLYTGKLIGHLVTLKYGK----ETQPVIAKDIQFDPVSDRPLHFDLMRVGAKEEIKIEI 106
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
P+ F D +P R+GG L ++ TV+ + AD +P + VDL ++ + I D+++
Sbjct: 107 PVAFVNADEAPYTRQGGMLEVVRHTVEIMVRADRIPAELVVDLKGREIGENIRISDIQL 165
>gi|281423251|ref|ZP_06254164.1| ribosomal protein L25, Ctc-form [Prevotella oris F0302]
gi|299140506|ref|ZP_07033644.1| ribosomal protein L25, Ctc-form [Prevotella oris C735]
gi|281402587|gb|EFB33418.1| ribosomal protein L25, Ctc-form [Prevotella oris F0302]
gi|298577472|gb|EFI49340.1| ribosomal protein L25, Ctc-form [Prevotella oris C735]
Length = 204
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVF-EQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSR 117
R G + S + RK G +P ++ E++D +V ++RK++ +
Sbjct: 11 RTDLGKKASKELRKQGFIPCNLYGEKKDADGRPEAHAFTVSFCELRKII-------YTPH 63
Query: 118 LF--DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
++ +L + E + L +++ H TDAPL+V F + + I +P+
Sbjct: 64 IYVINLNIDGEHHTAIL--------KEIQFHPVTDAPLHVDFYEVNDQKPINIGIPVKLT 115
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G ++ G+R GG +N R + P +P ++D+D++ L + + I G+L L++
Sbjct: 116 G--LAQGVRDGGRMNLSIRKINVTAPYQQIPEHLDIDVTALKIGKSIKVGELSFE-GLEI 172
Query: 236 LRSKDEPVCKIAGGR 250
SKD VC + R
Sbjct: 173 TTSKDVVVCSVKMTR 187
>gi|387126393|ref|YP_006294998.1| 50S ribosomal protein L25 [Methylophaga sp. JAM1]
gi|386273455|gb|AFI83353.1| LSU ribosomal protein L25p [Methylophaga sp. JAM1]
Length = 224
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 86/177 (48%), Gaps = 17/177 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
+ A R G S + R +G+VP++V+ G K +S+ N +L+ HL
Sbjct: 7 VHAEARTDQGKGASRRLRHSGKVPAVVY-------GAEKEPVSISINH-NQLIRHLAEEA 58
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPL-NVTFLRAPPEALLKIDVPL 172
F + + L + + K +V+ + + H D + + FLR + + + +PL
Sbjct: 59 FYAHILTLVIDGK--------KNQVVLKDLQRHPANDNKIIHADFLRIDSKHAMTMTIPL 110
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F ++ + G++ GG ++ + V+ C +P YI+VD+++L +++ I +LK+
Sbjct: 111 HFVNEEKAVGVKAGGLISHLMTEVEISCLPKDLPEYIEVDVAKLAMDEAIHLSELKL 167
>gi|340347672|ref|ZP_08670777.1| 50S ribosomal protein L25 [Prevotella dentalis DSM 3688]
gi|433652556|ref|YP_007296410.1| ribosomal protein L25, Ctc-form [Prevotella dentalis DSM 3688]
gi|339608866|gb|EGQ13749.1| 50S ribosomal protein L25 [Prevotella dentalis DSM 3688]
gi|433303089|gb|AGB28904.1| ribosomal protein L25, Ctc-form [Prevotella dentalis DSM 3688]
Length = 203
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R + G + + RK G VP ++ +E +V +++RKL+ + +
Sbjct: 11 RETVGKKATKALRKEGFVPCNLYGEERENGKPVAIAFAVSFSELRKLI-------YTPHI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
+ + V D ++ V+ +++ H TDAPL+V F + + I +P+ G
Sbjct: 64 YVIRVNL-----DGVDHTAVM-KEIQFHPVTDAPLHVDFFEVNDQKPITIGIPVKLVG-- 115
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
++ G+R GG +N R + P +P ++DVD++ L + + I G+L + +++ S
Sbjct: 116 LAQGVRDGGRMNLSIRKINVTAPYQQIPEHLDVDVTALKIGKSIKVGELS-YEGIEIATS 174
Query: 239 KDEPVCKIAGGR 250
KD VC + R
Sbjct: 175 KDVVVCSVKMTR 186
>gi|393719169|ref|ZP_10339096.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
echinoides ATCC 14820]
Length = 214
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 23/148 (15%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ GRVP++++ GNK+ I V+ + +L L F++ + +EV +
Sbjct: 24 RREGRVPAVIY--------GNKQDPQSIHVEEKALMRL---LMTGHFMNSVVMIEVDGQ- 71
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKG- 186
+VR LP+ V + T+ P++ FLR + + VP+VF ++ +PG++ G
Sbjct: 72 -------QVRTLPKDVSFDAVTERPVHADFLRIGAHTTVHVSVPVVFTDEEEAPGIKTGK 124
Query: 187 GYLNTIKRTVKFLCPADIVPPYIDVDLS 214
G LN I+ ++ +C A +P I + L+
Sbjct: 125 GVLNIIQHELELVCDAAEIPDDITISLA 152
>gi|58698057|ref|ZP_00372981.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Drosophila ananassae]
gi|58535414|gb|EAL59489.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Drosophila ananassae]
Length = 203
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 16/189 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI A R T+ RK G +P I++ G+ N L T ++
Sbjct: 8 TINAELRDITKTKAMHSLRKKGNIPGIIY----GKGHDNVNL----TLSAKEFTKQYKSG 59
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ L +L + SG +K L R + LH D +V + +KID+PL
Sbjct: 60 SLSAHLIELNI-----SG---KKEYALVRDIQLHVVKDTVQHVDLQFVDKGSEIKIDIPL 111
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F + +PG++ GG LN + R++ C D +P I+VDLS + Q I D+K+
Sbjct: 112 SFVNESKAPGIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEG 171
Query: 233 LKLLRSKDE 241
+K + ++E
Sbjct: 172 VKFVAHEEE 180
>gi|56552806|ref|YP_163645.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis ZM4]
gi|260753467|ref|YP_003226360.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|384412170|ref|YP_005621535.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|397677104|ref|YP_006518642.1| 50S ribosomal protein L25 [Zymomonas mobilis subsp. mobilis ATCC
29191]
gi|68053039|sp|Q5NL76.1|RL25_ZYMMO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|56544380|gb|AAV90534.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis ZM4]
gi|258552830|gb|ACV75776.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|335932544|gb|AEH63084.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|395397793|gb|AFN57120.1| 50S ribosomal protein L25 [Zymomonas mobilis subsp. mobilis ATCC
29191]
Length = 220
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
+LA R G S R+ G VP++++ + G I+V + K+ L
Sbjct: 6 NLLAKKRDRAGKGASRAIRREGLVPAVIYGDKTPAMG-----ITVDHIALFKM---LNTG 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F++ + ++V + K+ +P+ V H TD L+V FLR +L+++ +P+
Sbjct: 58 HFMNSVVTIDVDGQ--------KLPTIPKDVQFHPVTDRVLHVDFLRVSANSLVEVAIPV 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
+ ++ SPG++ GG LN I +K A +P I V ++ L+V I +K+
Sbjct: 110 SYVDEEKSPGIKLGGVLNIIHHELKLKVKATAIPEEIVVSVAGLEVGDSIHLNQIKLPEG 169
Query: 233 LKLLRSKDEPVC 244
+L + E
Sbjct: 170 AELAHDEHESTA 181
>gi|254420965|ref|ZP_05034689.1| ribosomal protein L25, Ctc-form [Brevundimonas sp. BAL3]
gi|196187142|gb|EDX82118.1| ribosomal protein L25, Ctc-form [Brevundimonas sp. BAL3]
Length = 231
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 52 ETILAIP-RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLG 110
E IL + R GT + R+AG VP +++ GG+K ++V N+
Sbjct: 24 EIILNVDVRDGVGTGSARAARRAGFVPGVLY-------GGDKAPVAVAVNE-----KDFR 71
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
+S + +L V ++G E V+ + + +D P++ +R A +KI+V
Sbjct: 72 KSLYTGKLLGHLVTLKYGE----ETQPVIAKDIQFDPVSDRPMHFDLMRVDQHAPIKIEV 127
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
P+ F+ D +P +R+GG L ++ V+ + AD +P + VDL + + I D+++
Sbjct: 128 PVYFKNADDAPFVRQGGSLEVVRHAVEIMVKADSIPEELVVDLIKSQMGDTIRFSDIEL 186
>gi|34540029|ref|NP_904508.1| 50S ribosomal protein L25 [Porphyromonas gingivalis W83]
gi|188994143|ref|YP_001928395.1| 50S ribosomal protein L25 [Porphyromonas gingivalis ATCC 33277]
gi|419971626|ref|ZP_14487064.1| ribosomal protein L25, Ctc-form [Porphyromonas gingivalis W50]
gi|71153158|sp|Q7MXK8.1|RL25_PORGI RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736349|sp|B2RHF3.1|RL25_PORG3 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|34396340|gb|AAQ65407.1| ribosomal protein L25 [Porphyromonas gingivalis W83]
gi|188593823|dbj|BAG32798.1| putative 50S ribosomal protein L25 [Porphyromonas gingivalis ATCC
33277]
gi|392608097|gb|EIW90960.1| ribosomal protein L25, Ctc-form [Porphyromonas gingivalis W50]
Length = 192
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 96/195 (49%), Gaps = 20/195 (10%)
Query: 58 PRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSR 117
PRA G + + RK ++P++++ G G I V + +R L+ +
Sbjct: 10 PRAEFGKKAAKAIRKEDQIPAVLY----GGKGEGVNFI-VSQDAVRNLI-------YSPE 57
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
+F +E+ E GSG + + +++ H TD +++ FL+ E + ++VP+V G
Sbjct: 58 IFLVELTVE-GSGSY----KAILKEIQFHPVTDRIIHIDFLQVTDEKPVVMEVPVVLTGH 112
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
+ G++ GG L+ R +K +P +D+D+S+L + + I G+L L L+
Sbjct: 113 --AEGVKAGGKLSLEMRKLKVKALYSEIPEKLDIDVSDLQLGKTIQVGELHFE-GLTLMN 169
Query: 238 SKDEPVCKIAGGRAS 252
+K+ VC + RA+
Sbjct: 170 AKNAVVCAVKLTRAA 184
>gi|402496564|ref|YP_006555824.1| 50S ribosomal protein L25 [Wolbachia endosymbiont of Onchocerca
ochengi]
gi|398649837|emb|CCF78007.1| 50S ribosomal protein L25 [Wolbachia endosymbiont of Onchocerca
ochengi]
Length = 203
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 16/189 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI A R T+ R+ G +P++++ + G N L + + + KL G L
Sbjct: 8 TINAELRDVTKTKAMYSLREKGYIPAVIYGK--GHDNVNLTLSTKEFTKKYKL-GSLS-- 62
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ + +L + SG +K L R + H D +V F + +KID+PL
Sbjct: 63 ---AHVIELNI-----SG---KKEYALVRSIQWHMVKDTIQHVDFQFVDKDGEVKIDIPL 111
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
+F + SPG++ GG LN + R++ D +P I+VDLS+ + Q I D+K+
Sbjct: 112 LFVNESKSPGIKLGGVLNILCRSITVKSSLDRIPQAIEVDLSDKMIGQSIHISDVKLPEG 171
Query: 233 LKLLRSKDE 241
+KL ++E
Sbjct: 172 VKLAAHEEE 180
>gi|261880168|ref|ZP_06006595.1| 50S ribosomal protein L25 [Prevotella bergensis DSM 17361]
gi|270333139|gb|EFA43925.1| 50S ribosomal protein L25 [Prevotella bergensis DSM 17361]
Length = 217
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
E+ + +++ H TDAPL+V F + + I +P+ G ++ G+R GG +N
Sbjct: 73 EEHTAIMKEIQFHPVTDAPLHVDFYEVNDQKPITIGIPVKLVG--LAQGVRDGGRMNLSI 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGR 250
R ++ P +P ++D+D+S+L + + I GDL + LK SK+ +C I R
Sbjct: 131 RKIEVTAPYQQIPEHLDIDVSKLTIGKSIRVGDLS-YEGLKYATSKNVVICSIKMTR 186
>gi|408377521|ref|ZP_11175122.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
albertimagni AOL15]
gi|407748512|gb|EKF60027.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
albertimagni AOL15]
Length = 201
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 23/170 (13%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRS 112
A+ R G S + R+ G +P++++ G+K+ IS+ TN+I K + H G
Sbjct: 10 AVARERVGKGSSRELRRNGLIPAVIY--------GDKQAPIAISINTNEITKRI-HAGG- 59
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F++ + +E+ + K+ VLP+ L D ++V FLR + + + VP+
Sbjct: 60 -FMTTVATIELDGK--------KISVLPKDYQLDRVRDFTMHVDFLRVSANSQVSVQVPV 110
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
F ++ S ++ G LN ++ V+ CPA +P I VDL+ L V I
Sbjct: 111 HFVNEEKS-AIKTGAVLNIVRHEVELHCPASDIPEAITVDLAGLKVGDAI 159
>gi|255264479|ref|ZP_05343821.1| ribosomal protein L25, Ctc-form [Thalassiobium sp. R2A62]
gi|255106814|gb|EET49488.1| ribosomal protein L25, Ctc-form [Thalassiobium sp. R2A62]
Length = 213
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSR 117
R G + + R+ G VP IV+ GG + L I++ N + K L F+S
Sbjct: 13 RTGTGKGAARQARRDGLVPGIVY------GGGEEPLAINIPYNVLFK---KLKAGRFLST 63
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
LF+L+V + VRV+ RKV D P ++ +R + + +P+ F G+
Sbjct: 64 LFNLKVEGH-------DDVRVICRKVQRDVVKDLPTHLDLMRLKRTTKIALFIPVEFEGE 116
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
D PG+RKGG L+ ++ V+ + A +P + ++ L++ I +++ K
Sbjct: 117 DDCPGIRKGGLLSVVRPEVELVVTAGDIPEKLTASIAGLEIGDTITISSIELPAGAKATI 176
Query: 238 SKDEPVCKIA 247
+D + IA
Sbjct: 177 DRDFVIGNIA 186
>gi|340785804|ref|YP_004751269.1| 50S ribosomal protein L25 [Collimonas fungivorans Ter331]
gi|340551071|gb|AEK60446.1| LSU ribosomal protein L25p [Collimonas fungivorans Ter331]
Length = 208
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R AG+ P IV+ GG+ +++ + L L +
Sbjct: 3 VIAFVRKEQGTGASRRLRNAGQTPGIVY-------GGSDAPVNISLDH-NALYHALKKET 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLE+ +VL R +H+ L+ F R + + + VPL
Sbjct: 55 FHSSILDLEIDGAVQ--------KVLLRDFQVHAYKQLVLHADFQRVDAKQAIHVKVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
F +++P ++ G ++ + ++ C PAD+ P +I+VDL+ ++V I DLK+
Sbjct: 107 FVNAEIAPAVKLSGAIISHVFTELEVTCLPADL-PEFIEVDLTNIEVGHSIHLADLKL 163
>gi|146328681|ref|YP_001208996.1| 50S ribosomal protein L25 [Dichelobacter nodosus VCS1703A]
gi|172047325|sp|A5EWV0.1|RL25_DICNV RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|146232151|gb|ABQ13129.1| 50S ribosomal protein L25 [Dichelobacter nodosus VCS1703A]
Length = 225
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 96/193 (49%), Gaps = 20/193 (10%)
Query: 47 DPRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRK 104
+ +Y T+ A+ R G S + R+ G VP+I++ GGN + I+++ ++++K
Sbjct: 3 EQKYRYTLHAVVREEQGKGASRRLRRQGLVPAIIY-------GGNTEPQAIAIKQDELKK 55
Query: 105 LVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEA 164
+ SFF S++ +L++ D E +L R V H + F R
Sbjct: 56 NAKN--HSFF-SQIINLKI-------DGQEDQEILVRDVQHHIYKPLFQHFDFQRIVRGQ 105
Query: 165 LLKIDVPLVFRGDDVSPGLRK-GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKIL 223
+ V L F G++ +PG++ GG ++ TV+ +C ++P YI VDLSE ++ I
Sbjct: 106 EITATVLLEFVGEERAPGIKTDGGIVSRHMTTVEVICRPSLLPEYIAVDLSEANIGDIIT 165
Query: 224 AGDLKVHPALKLL 236
DLK+ ++L+
Sbjct: 166 LADLKLPEGVRLV 178
>gi|304321414|ref|YP_003855057.1| 50S ribosomal protein L25 [Parvularcula bermudensis HTCC2503]
gi|303300316|gb|ADM09915.1| 50S ribosomal protein L25 [Parvularcula bermudensis HTCC2503]
Length = 212
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQ--TNQIRKLVGHLGRSFFVS 116
R GT S R+ G VP++++ GG++ ++++ NQ+ K ++
Sbjct: 12 RQRAGTGGSRAVRRDGWVPAVLY-------GGDEEPLNIKLRYNQVLK-------AYQTG 57
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
RL D+ + + G+ +V+ R + + D P +V +R + ++VP+ F
Sbjct: 58 RLIDVLAKIKLEGGEQ----QVIGRDIQVDPVKDLPRHVDLMRVDARTKVTVNVPMRFLN 113
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
++ PGL+KGG LN ++ V+ + A +P ++ DL+ DV I
Sbjct: 114 EETCPGLKKGGVLNIVRHEVEVVASATNIPEALEADLAGADVGDTI 159
>gi|188591108|ref|YP_001795708.1| 50S ribosomal protein l25/general stress protein ctc [Cupriavidus
taiwanensis LMG 19424]
gi|226736303|sp|B2AGT7.1|RL25_CUPTR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|170938002|emb|CAP62986.1| 5S rRNA binding 50S RIBOSOMAL SUBUNIT PROTEIN L25 [Cupriavidus
taiwanensis LMG 19424]
Length = 205
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 27/194 (13%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R+ GT S + R +G+ P I++ GG ++I + N + L +
Sbjct: 3 VVAFERSVQGTGASRRLRNSGKTPGIIY-------GGAAEPKMIELDHNALWHA---LKK 52
Query: 112 SFFVSRLFDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
F S + DLEV +SE + L R +H L+V F R + +
Sbjct: 53 EAFHSSILDLEVAGKSE----------KALLRAFQMHPFKPLVLHVDFQRVSANDKIHVK 102
Query: 170 VPLVFRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
VPL F + +PG++ G G +N I ++ C PAD+ P +I+VD+ +++ Q + DL
Sbjct: 103 VPLHFMNQETAPGVKLGHGLVNHIVNDLEVSCLPADL-PEFIEVDVGAMELGQTLHLSDL 161
Query: 228 KVHPALKLLRSKDE 241
K+ + ++ D+
Sbjct: 162 KLPKGVTVITHGDD 175
>gi|302383773|ref|YP_003819596.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brevundimonas
subvibrioides ATCC 15264]
gi|302194401|gb|ADL01973.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brevundimonas
subvibrioides ATCC 15264]
Length = 236
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 52 ETILAIP-RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLG 110
E IL + R + GT + R++G VP I++ GG+K +++ N+
Sbjct: 3 EIILNVDVRENIGTGGARAARRSGAVPGILY-------GGDKAPVAISVNE-----KDFR 50
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
++ + +L V ++G E V+ + V +D PL+ +R + +KI+V
Sbjct: 51 KNLYTGKLLGHLVTLKYGD----ETQSVIAKDVQFDPVSDRPLHFDLMRVDAKQTIKIEV 106
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
P+ F +D R+GG L ++ +V+ L AD +P + VDL+ + + D+KV
Sbjct: 107 PIHFINEDQCKAFRQGGTLEIVRHSVEILVRADHIPEDLVVDLAGHKLGDTLRWSDVKV 165
>gi|253997198|ref|YP_003049262.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylotenera
mobilis JLW8]
gi|253983877|gb|ACT48735.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylotenera
mobilis JLW8]
Length = 202
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A+ R + GT S + R AG VP +V+ GG K ++ N ++L
Sbjct: 5 INAVKRDAKGTGASRRLRHAGSVPGVVY-------GGGKDAYPLEINA-KELFLQFRHEA 56
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + L + + K VL R +H + +V F R + + VP
Sbjct: 57 FHASVLTLIIEGK--------KESVLLRDFQMHPVRNTIQHVDFQRVSATEKIHVKVPFH 108
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F D +PG++ GG + I+ C A +P +I+VD+S L+V Q I +K+
Sbjct: 109 FTNADAAPGVKLGGGIVAHIQTEADVSCLAKDLPEFIEVDVSALEVGQSIHLSQIKLPKG 168
Query: 233 ---LKLLRSKDEPVCKIAGGRAS 252
++L D V IA R S
Sbjct: 169 VEFVQLAHGDDAAVASIAKTRGS 191
>gi|251772227|gb|EES52797.1| Ribosomal protein L25 [Leptospirillum ferrodiazotrophum]
Length = 191
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 21/186 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLV-GHLGRSFFVSR 117
R S G V+ R++G VP++V+ G + +S + K + GH GR+
Sbjct: 11 RDSTGKGVARTLRRSGHVPAVVYGS------GKAQSLSALLKDVEKAIQGHAGRNG---- 60
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
LFDLE+ S + VR + R T L+V FL +A +K VP+ G
Sbjct: 61 LFDLEISGGNSSRTALTLVRDIQRD----PITGKILHVDFLEVSEKARVKNRVPVEVIGS 116
Query: 178 DVSP-GLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
SP G++KGG L+ + R + C + +P +I VD S LD+ Q + D+ + P + +L
Sbjct: 117 --SPEGVKKGGILDVVHRELHVECLSFQMPDHIQVDASALDINQTLHLRDVTLPPGVTVL 174
Query: 237 RSKDEP 242
D+P
Sbjct: 175 ---DDP 177
>gi|15839232|ref|NP_299920.1| 50S ribosomal protein L25 [Xylella fastidiosa 9a5c]
gi|71153678|sp|Q9PA77.1|RL25_XYLFA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|9107874|gb|AAF85440.1|AE004071_8 50S ribosomal protein L25 [Xylella fastidiosa 9a5c]
Length = 208
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLG 110
+ I A R G S + R AG +P+I++ GG +R +S+Q N + +
Sbjct: 3 NHQIKAQRRKDEGKGASRRLRHAGMIPAIIY-------GGEQRPVSIQLNHEQIWLAQQN 55
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
F+ S + DL V + G G+ +VL R + H ++V F R +A L + V
Sbjct: 56 EWFY-SSILDLNV--DGGGGE-----KVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAV 107
Query: 171 PLVFRGDDVSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
PL F SP + G + T + V C +P +I+VDLS L V I D+
Sbjct: 108 PLHFINQATSPAGKASGVVITHELNEVHVSCLPKDLPEFIEVDLSTLSVGHVIHLSDI 165
>gi|357406690|ref|YP_004918614.1| 50S ribosomal protein L25 [Methylomicrobium alcaliphilum 20Z]
gi|351719355|emb|CCE25031.1| 50S ribosomal protein L25 [Methylomicrobium alcaliphilum 20Z]
Length = 206
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 55 LAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFF 114
+A R PGT + R+ G+VP++++ E G ++ + N++ K HL
Sbjct: 8 VAEARERPGTAYAKSVRRQGKVPAVIYGGEAG-----PEMLVLDHNEVVK---HLAHEAV 59
Query: 115 VSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVF 174
S + D+ V + L + V H L++ FLR LK VPL F
Sbjct: 60 YSHILDVVVAGKVQKAIL--------KSVQRHPAKAKVLHLDFLRVKANEKLKAQVPLHF 111
Query: 175 RGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
+++ G + GG + ++ C + +P YI+VDL+ LD+ Q + L
Sbjct: 112 INEEICVGAKVGGVVMHSLVDIEVACLPEDLPEYIEVDLASLDLGQSLHVSQL 164
>gi|163744226|ref|ZP_02151586.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibulbus
indolifex HEL-45]
gi|161381044|gb|EDQ05453.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibulbus
indolifex HEL-45]
Length = 218
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G + + R+ G VP IVF GG+ + + KL+ L + F + L
Sbjct: 13 RTGTGKGAARQARRDGMVPGIVF-------GGDNEPLPINI-PFNKLLTRLRQGRFKATL 64
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
F+L+V + VRV+ R V H D P ++ +R + + + + +G++
Sbjct: 65 FNLKVEGH-------DDVRVICRDVQRHVVKDLPTHIDLMRLKRTTKINLFINVEVKGEE 117
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDV 218
PGL+KGG L ++ V+ + A +P ++ VD++ L++
Sbjct: 118 ECPGLKKGGVLTLVRPEVELVVTAADIPEFVTVDVTGLEI 157
>gi|436836217|ref|YP_007321433.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fibrella
aestuarina BUZ 2]
gi|384067630|emb|CCH00840.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fibrella
aestuarina BUZ 2]
Length = 187
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 27/207 (13%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQI--RKLVGHLGR 111
I+ RA+ G S R G VP +++ GN + + I R L
Sbjct: 6 IVGYQRANLGRTESQAIRAEGNVPCVLY--------GNGQQVHFYAPAILFRPL------ 51
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F ++D+ + E + R + ++ H +DA ++ FL+ +A+ K+ VP
Sbjct: 52 -LFTPDVYDVTLNIEGA------EYRAILQETQFHPVSDALIHADFLQVSDKAV-KVAVP 103
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
+ G+ +PG++KGG L T R ++ P D +P YIDVD+S LD+ + + G + V
Sbjct: 104 VRLVGN--APGVQKGGKLVTRIRKLRVRGPVDSIPEYIDVDVSTLDLGKSVRVGQIPVD- 160
Query: 232 ALKLLRSKDEPVCKIAGGRASDQKKSK 258
+++L PV I RA + SK
Sbjct: 161 GIEMLEQASNPVASIEIPRALRGQVSK 187
>gi|190571325|ref|YP_001975683.1| 50S ribosomal protein L25/general stress protein Ctc [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|213018721|ref|ZP_03334529.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
gi|226694585|sp|B3CMB8.1|RL25_WOLPP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|190357597|emb|CAQ55038.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|212995672|gb|EEB56312.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
Length = 203
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Query: 116 SRLFDLEVRSEFGSGDLIE------KVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
++ F + +S S LIE K L R + H D +V F + +KID
Sbjct: 49 AKEFTKQYKSGALSAHLIELDISGKKEYALVRDIQWHVVKDTVQHVDFQFVDKGSEIKID 108
Query: 170 VPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+PL F + SPG++ GG LN + R++ C + +P I++DLS + Q I D+K+
Sbjct: 109 IPLSFINESKSPGIKLGGVLNVLCRSITVKCSPEKIPQVIEIDLSGKMIGQSIHINDVKL 168
Query: 230 HPALKLLRSKDE 241
+K + ++E
Sbjct: 169 PEGVKFVAHEEE 180
>gi|113866401|ref|YP_724890.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia
eutropha H16]
gi|122947171|sp|Q0KEP9.1|RL25_RALEH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|113525177|emb|CAJ91522.1| LSU ribosomal protein L25 [Ralstonia eutropha H16]
Length = 205
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 27/194 (13%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R+ GT S + R +G+ P I++ GG ++I + N + L +
Sbjct: 3 VVAFERSVQGTGASRRLRNSGKTPGIIY-------GGAAEPKMIELDHNALWHA---LKK 52
Query: 112 SFFVSRLFDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
F S + +LEV +SE + L R +H L+V F R + +
Sbjct: 53 EAFHSSILELEVAGKSE----------QALLRAFQMHPFKPLVLHVDFQRVSANDKIHVK 102
Query: 170 VPLVFRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
VPL F + +PG++ G G +N I ++ C PAD+ P +I+VDL+ +++ Q + D+
Sbjct: 103 VPLHFMNQETAPGVKLGHGIVNHILNDLEVSCLPADL-PEFIEVDLAAVELNQTVHLSDI 161
Query: 228 KVHPALKLLRSKDE 241
K+ + ++ D+
Sbjct: 162 KLPKGVTVITHGDD 175
>gi|353328252|ref|ZP_08970579.1| 50S ribosomal protein L25/general stress protein Ctc [Wolbachia
endosymbiont wVitB of Nasonia vitripennis]
Length = 203
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Query: 116 SRLFDLEVRSEFGSGDLIE------KVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
++ F + +S S LIE K L R + H D +V F + +KID
Sbjct: 49 AKEFTKQYKSGALSAHLIELDISGKKEYALVRDIQWHVVKDTVQHVDFQFVDKGSEIKID 108
Query: 170 VPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+PL F + SPG++ GG LN + R++ C + +P I++DLS + Q I D+K+
Sbjct: 109 IPLSFINESKSPGIKLGGVLNVLCRSITVKCSPEKIPQLIEIDLSGKMIGQSIHINDVKL 168
Query: 230 HPALKLLRSKDE 241
+K + ++E
Sbjct: 169 PEGVKFVAHEEE 180
>gi|300122709|emb|CBK23275.2| Ribosomal protein L25 [Blastocystis hominis]
Length = 253
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R G S RK G +P +++ DG + LI+V +++ + L +
Sbjct: 44 IPAFRREKDGKNYSRFLRKNGAIPGVLY-GSDGNGHDERILIAVPASEVDRFTKRLNLAL 102
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
+ LF+L++ E ++ PR++ H TD P N+ FLR + + +P+
Sbjct: 103 ECT-LFELDLEGE--------RILCFPRQLSCHPLTDKPENLNFLRMNKKTGTMVQIPIR 153
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADI--VPPYIDVDLSELDVEQKILAGDL 227
+ + ++ GG+L+T R + D+ VPP+I+ +L +L ++ DL
Sbjct: 154 YYNQTKNREIKLGGFLSTATRYLDVRVKGDVTYVPPFINCNLEKLTHKRAFGVEDL 209
>gi|85859731|ref|YP_461933.1| 50S ribosomal protein L25 [Syntrophus aciditrophicus SB]
gi|109893400|sp|Q2LUK6.1|RL25_SYNAS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|85722822|gb|ABC77765.1| LSU ribosomal protein L25P [Syntrophus aciditrophicus SB]
Length = 200
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 19/192 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G + + R+ G +P++++ G + +SV + ++ + + + +
Sbjct: 11 RKESGKEQARRMRREGLIPAVLY-----GPGTDPVSLSVNASDLKTALKGAEENVLIKLI 65
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTF--LRAPPEALLKIDVPLVFRG 176
D SG L+EK L R++ + T+ + F LR E+ DVP+ F G
Sbjct: 66 ID-------DSGRLMEK-NSLIRELQIEPLTNNFFHADFYALRMDQESTF--DVPIHFEG 115
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
V G+ KGG L +KR +K C +P I VD+S LDV +L GDL + +++
Sbjct: 116 QPV--GIEKGGELQYLKREIKVSCLPSELPDCITVDISRLDVGDAVLIGDLSLSESIRCF 173
Query: 237 RSKDEPVCKIAG 248
SKD + IA
Sbjct: 174 DSKDIVLVTIAA 185
>gi|373450261|ref|ZP_09542282.1| 50S ribosomal protein L25 [Wolbachia pipientis wAlbB]
gi|371932534|emb|CCE77280.1| 50S ribosomal protein L25 [Wolbachia pipientis wAlbB]
Length = 203
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Query: 116 SRLFDLEVRSEFGSGDLIE------KVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
++ F + +S S LIE K L R + H D +V F + +KID
Sbjct: 49 AKEFTKQYKSGALSAHLIELDISGKKEYALVRDIQWHVVKDTVQHVDFQFVDKGSEIKID 108
Query: 170 VPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+PL F + SPG++ GG LN + R++ C + +P I++DLS + Q I D+K+
Sbjct: 109 IPLSFINEGKSPGIKLGGVLNVLCRSITVKCSPEKIPQVIEIDLSGKMIGQSIHINDVKL 168
Query: 230 HPALKLLRSKDE 241
+K + ++E
Sbjct: 169 PEGVKFVAHEEE 180
>gi|337286884|ref|YP_004626357.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermodesulfatator indicus DSM 15286]
gi|335359712|gb|AEH45393.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermodesulfatator indicus DSM 15286]
Length = 208
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 14/191 (7%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R G ++ K R G VP +++ E ++V+ N+++K +L R
Sbjct: 8 ATIRPKTGKEIARKLRAQGLVPGVIYGPET-----EPVPLAVKLNELKK---YLYRYRDE 59
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+F+L + + +G ++K+ L + + H TD L+V F E ++++VP+
Sbjct: 60 QLIFNLTLEN---NGSTLKKI-ALVKDLQYHPVTDEILHVDFYEISMEREVEVEVPIELV 115
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G + G+ GG+L + +T+ C ++P I+VD+SELD I DL ++
Sbjct: 116 GK--AKGVETGGHLQQLLQTMTVACLPGLIPDKIEVDVSELDQGDVIHVKDLTPPEGVRY 173
Query: 236 LRSKDEPVCKI 246
L + DEPV +
Sbjct: 174 LDNPDEPVVTV 184
>gi|148653903|ref|YP_001280996.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter
sp. PRwf-1]
gi|172048580|sp|A5WHA5.1|RL25_PSYWF RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|148572987|gb|ABQ95046.1| LSU ribosomal protein L25P [Psychrobacter sp. PRwf-1]
Length = 224
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 53 TILAIPRAS--PGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGH 108
T+ I R + G S + RK VP+I++ GGN+ I+++ N++ KL
Sbjct: 7 TVNGITRTNDQQGKGASRRLRKQNLVPAIIY-------GGNEEPTAIAIKKNELWKL--- 56
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
L F S + + + E E + V+ + + H ++ F R + +
Sbjct: 57 LENEAFFSNILTINLEGE-------EHLAVI-KDLQRHPSKGFAMHADFQRIVKGQKINM 108
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
+PL F G + +PG++ GG L+T+ ++ +C +P +++VD+S L++ + + D+K
Sbjct: 109 QIPLHFTGREEAPGIKAGGILSTLVTDIEIVCLPSNLPEFLEVDVSNLEIGESLHLTDIK 168
Query: 229 VHPALKLLR-SKDEPV 243
+ + + DEPV
Sbjct: 169 LPEGVVIFELDVDEPV 184
>gi|374368068|ref|ZP_09626123.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
basilensis OR16]
gi|373100399|gb|EHP41465.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
basilensis OR16]
Length = 198
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 23/192 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R+ GT S + R AG+ P I++ GG ++I + N L L +
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPGIIY-------GGAAEPKMIELDHN---ALFHALKK 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + D+EV + + L R +H L+V F R + + VP
Sbjct: 53 EAFHSSILDIEVEGK--------AEKALLRAFQMHPFKPLVLHVDFQRVSATDKIHVKVP 104
Query: 172 LVFRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
L F + +PG++ G G +N I ++ C PAD+ P +I+VDL ++ Q + D+K+
Sbjct: 105 LHFMNQENAPGVKLGHGIVNHIMNELEVSCLPADL-PEFIEVDLGNAELGQTLHLSDVKL 163
Query: 230 HPALKLLRSKDE 241
+ + DE
Sbjct: 164 PKGVSAITHGDE 175
>gi|89056087|ref|YP_511538.1| 50S ribosomal protein L25 [Jannaschia sp. CCS1]
gi|109893367|sp|Q28L99.1|RL25_JANSC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|88865636|gb|ABD56513.1| LSU ribosomal protein L25P [Jannaschia sp. CCS1]
Length = 216
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 15/187 (8%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R G + + R+ G VP IV+ G + I++ N + K L
Sbjct: 8 LIAEARTGTGKGAARQARREGNVPGIVY-----GGGIDPLAINIPFNVLLK---RLKDGR 59
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F+S LF+++V + + VRV+ R V D P +V F+R + + + +P+
Sbjct: 60 FLSTLFNMKVEGQ-------DDVRVICRNVQRDVVKDLPTHVDFMRLKRTSKIALFIPVE 112
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
G++ PGL+KGG L ++ V+ A +P I +DL+ L++ + +++
Sbjct: 113 VIGEEECPGLKKGGVLTMVRPEVELRVTAGDIPEQITIDLTGLEIGDTVTISSVELPAGA 172
Query: 234 KLLRSKD 240
K +D
Sbjct: 173 KATIDRD 179
>gi|32476153|ref|NP_869147.1| 50S ribosomal protein L25 [Rhodopirellula baltica SH 1]
gi|71153164|sp|Q7UKU9.1|RL25_RHOBA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|32446697|emb|CAD76533.1| probable 50S ribosomal protein L25 [Rhodopirellula baltica SH 1]
Length = 212
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 43 LPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQI 102
+PR P + I R S GT + + R+ G VP++++ HG ++V + Q+
Sbjct: 1 MPRSVPVMTDVIQVTKRESTGTAATRRLRRDGHVPAVLY-----GHGEANEHLAVPSAQV 55
Query: 103 RKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPP 162
+ L+ H ++ +S D L+ ++ P + + L++ +R
Sbjct: 56 KGLLRHHSKTVQLSGDVD--------ETALVSDMQWDPLGIEV-------LHMDLIRVNL 100
Query: 163 EALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
+ +++ VP+V G+ V G+R+GG L V+ C A +P + +++SEL V +
Sbjct: 101 KEKVELGVPIVLHGEAV--GVREGGMLLENVHEVEIRCSAGSIPDNLVLEVSELGVGEHK 158
Query: 223 LAGDLKVHPALKLLRSKDEPVCKIAGGR 250
AGDL + ++L+ D + I R
Sbjct: 159 TAGDLTLPEGVELITDVDVVIAHIEAQR 186
>gi|119386784|ref|YP_917839.1| 50S ribosomal protein L25 [Paracoccus denitrificans PD1222]
gi|166223701|sp|A1B9E9.1|RL25_PARDP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|119377379|gb|ABL72143.1| LSU ribosomal protein L25P [Paracoccus denitrificans PD1222]
Length = 208
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A RA G + + R+ G+VP IV+ G + I ++ N L+ L
Sbjct: 8 LVAEARAGTGKGAARQARREGKVPGIVYGD-----GKEPQPIQIEFNS---LLTKLRAGR 59
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F+S L++L+V + + VRV+ R V D P ++ F+R + + + +
Sbjct: 60 FMSTLWNLKVEGQ-------DDVRVVCRGVQRDVVKDLPTHIDFMRLHRNTRVNLFIHVN 112
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
F D +PGL++GG L ++ V+ + A +P I VDL+ + I D+ + +
Sbjct: 113 FENQDEAPGLKRGGTLVVVRPEVELVVTASDIPEQITVDLTGKQIGDTIHINDVVLPKGV 172
Query: 234 KLLRSKDEPVCKIA---GGRASDQ 254
K ++ + IA G R++D
Sbjct: 173 KPTIDRNFVIANIAAPSGLRSADN 196
>gi|358451352|ref|ZP_09161786.1| 50S ribosomal protein L25/general stress protein Ctc [Marinobacter
manganoxydans MnI7-9]
gi|357224585|gb|EHJ03116.1| 50S ribosomal protein L25/general stress protein Ctc [Marinobacter
manganoxydans MnI7-9]
Length = 216
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 53 TILAIPRASPGTRVSVKERKAGR-VPSIVFEQEDGQHGGNKRL--ISVQTNQIRKLVGHL 109
I A PR G S + R+ R +P+I++ GGNK I++ N+++K L
Sbjct: 6 VIEAFPRDDQGRGASRRLRREERKIPAIIY-------GGNKDATPIAIWHNELKKA---L 55
Query: 110 GRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
F S + +E+ + K V+ + + H + FLR + + ++
Sbjct: 56 ENEAFFSHVLTVELNGK--------KESVILKDLQRHPYKPILTHADFLRVDKDHEIHVN 107
Query: 170 VPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
VPL F +D +P ++ GG N V+ +C +P +I+VD++ ++++Q + DLK
Sbjct: 108 VPLHFINEDTAPAIKLHGGVANHQINEVEVICLPQNLPEFIEVDMTSVEMDQVVHLSDLK 167
Query: 229 VHPALK---LLRSKDE--PVCKIA---GGRASD 253
+ +K LL+ +D PV I G +A D
Sbjct: 168 LPKDVKIAALLQGEDHDLPVVAIHKPRGAKADD 200
>gi|334146251|ref|YP_004509178.1| 50S ribosomal protein L25/general stress protein Ctc [Porphyromonas
gingivalis TDC60]
gi|333803405|dbj|BAK24612.1| 50S ribosomal protein L25/general stress protein Ctc [Porphyromonas
gingivalis TDC60]
Length = 192
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 20/195 (10%)
Query: 58 PRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSR 117
PRA G + + RK ++P++++ G G I V + +R L+ +
Sbjct: 10 PRAEFGKKAAKAIRKEDQIPAVLY----GGKGEGINFI-VSQDAVRNLI-------YSPE 57
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
+F +E+ E GSG + + +++ H TD +++ FL+ E + ++VP+V G
Sbjct: 58 IFLVELTVE-GSGSY----KAILKEIQFHPVTDRIIHIDFLQVTDEKPVVMEVPVVLTGH 112
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
+ G++ GG L+ R +K +P +D+D+S L + + I G+L L L+
Sbjct: 113 --AEGVKAGGKLSLEMRKLKVKALYSEIPEKLDIDVSGLQLGKTIQVGELHFE-GLTLMN 169
Query: 238 SKDEPVCKIAGGRAS 252
+K+ VC + RA+
Sbjct: 170 AKNAVVCAVKLTRAA 184
>gi|144898693|emb|CAM75557.1| 50S ribosomal protein L25 [Magnetospirillum gryphiswaldense MSR-1]
Length = 200
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
I+A R G + R+ G+VP +++ GG + I + + R + L +
Sbjct: 6 AIVAELRDRAGKGAARATRREGKVPGVIY-------GGKQDPICIAIDP-RVIWAELHKP 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F +RLFD+++ + K R L R V H +D P+++ +R +A++ + VP+
Sbjct: 58 GFKTRLFDVDLAAG-------GKHRCLCRDVQFHPVSDQPVHIDLMRVSADAVVHVKVPV 110
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
D SPG++ GG ++ V+ C D++P I +DL+ DV + DL
Sbjct: 111 HVINADKSPGVKAGGVVSLELHEVEVTCAPDLIPSEIVIDLAGKDVGYSVHVNDL 165
>gi|394990503|ref|ZP_10383335.1| hypothetical protein SCD_02931 [Sulfuricella denitrificans skB26]
gi|393790768|dbj|GAB72974.1| hypothetical protein SCD_02931 [Sulfuricella denitrificans skB26]
Length = 208
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 19/185 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R GT S + R+ GR+P++V+ GG K +++ + +F
Sbjct: 5 ISATARTLQGTGASRRLRRTGRIPAVVY-------GGEKDAAAIELDHKEVFYKLKNEAF 57
Query: 114 FVSRL-FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ L +L+ ++E +VL R +H ++V F R P+ + I VPL
Sbjct: 58 HATILSLNLDGKAE----------QVLLRDYQMHPFRPVVMHVDFQRVNPKEKIHIKVPL 107
Query: 173 VFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
F D++PG++ G ++ I V C +P +I+VDL+ L I +LK+
Sbjct: 108 HFANADIAPGVKLSAGIVSHIITEVDVACLPKDLPEFIEVDLANLAAGHSIHLSELKLGK 167
Query: 232 ALKLL 236
++L+
Sbjct: 168 GIELI 172
>gi|383756725|ref|YP_005435710.1| 50S ribosomal protein L25 [Rubrivivax gelatinosus IL144]
gi|381377394|dbj|BAL94211.1| 50S ribosomal protein L25 RplY [Rubrivivax gelatinosus IL144]
Length = 214
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 18/183 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ GT S + R A +VP IV+ G ++I + N L L + F
Sbjct: 5 AFERSVQGTGASRRLRNAAKVPGIVYG------AGEPKMIELDHNA---LFFALKKEAFH 55
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S + ++E+ + +EKV L R +H+ ++V F R L+ VPL F
Sbjct: 56 SSILEMELAGK------VEKV--LLRDFQMHAWKPIVMHVDFQRVDETTKLRKKVPLHFE 107
Query: 176 GDDVSPGLRKGGYL-NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
G++ SP ++ L + + ++ C A +P ++ +DLS L Q + DLK+ +K
Sbjct: 108 GEENSPAVKTDKCLVSHVANEIEIECLASQLPEFVTIDLSGLVKNQSLHLSDLKLPAGIK 167
Query: 235 LLR 237
+R
Sbjct: 168 AVR 170
>gi|84515241|ref|ZP_01002603.1| Ribosomal protein L25 [Loktanella vestfoldensis SKA53]
gi|84510524|gb|EAQ06979.1| Ribosomal protein L25 [Loktanella vestfoldensis SKA53]
Length = 204
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G + + R+ G VP IV+ G + + I++ N L+ L + F+S L
Sbjct: 13 RAGTGKGAARQARRDGEVPGIVY-----GGGIDPQSINIPFNY---LLTTLRKGRFMSTL 64
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
F+L+V + + VRV+ R V D P+++ +R + + + +P+ F D
Sbjct: 65 FNLKVEGQ-------DDVRVVCRGVQRDVVKDLPIHIDLMRLKRTSRVNLFIPVEFINGD 117
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
PG++KGG L ++ V+ A +P ++ VDL+ + I D+ + K +
Sbjct: 118 TCPGIKKGGVLTVVRNEVEMDVLAGDIPDHLTVDLANAQMGDVIHISDVTLPEGAKPVID 177
Query: 239 KDEPVCKIAGGRA 251
++ + I+ R
Sbjct: 178 RNFVIANISAPRG 190
>gi|254439461|ref|ZP_05052955.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 307]
gi|198254907|gb|EDY79221.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 307]
Length = 215
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 19/193 (9%)
Query: 48 PRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVG 107
P ++ T+ R G + + R+ G VP +V+ GG + I++ L+
Sbjct: 6 PDFEATL----RTDTGKGAARQARRDGLVPGVVY-------GGGEDPIAINV-PFNVLLK 53
Query: 108 HLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLK 167
L F+S LF+L+V + VRV+ R V H D P ++ F+R +
Sbjct: 54 RLQAGRFLSTLFNLKVEGH-------DDVRVICRNVQRHIVKDLPTHLDFMRLKRTTKIN 106
Query: 168 IDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
+ + + F +D P L++GG L ++ V+ + A +P + VDL+ L++ + I +
Sbjct: 107 LFIGVEFINEDECPALKEGGVLIPVRNEVELIVTAGDIPEILTVDLTGLELGETITISSI 166
Query: 228 KVHPALKLLRSKD 240
K+ K +D
Sbjct: 167 KLPAGAKATIDRD 179
>gi|293607609|ref|ZP_06689943.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Achromobacter
piechaudii ATCC 43553]
gi|292814042|gb|EFF73189.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Achromobacter
piechaudii ATCC 43553]
Length = 216
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 49 RYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGH 108
+ +A R+ G+ S + R+AGRVP+IV+ GG ++++ + ++
Sbjct: 11 EFSMKFIATARSVQGSSASRRLRRAGRVPAIVY-------GGTAAPLNIELDH-NEIYHA 62
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
L + F + + +++ GS D +VL R V H+ L+V F R L+
Sbjct: 63 LRKEEFHASILQMQLE---GSKD----EQVLLRSVQWHAYKPQVLHVDFQRVDANQALRT 115
Query: 169 DVPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
VPL F ++SP ++ G ++ + ++ C +P +I+VDL+ + I D+
Sbjct: 116 KVPLHFVNAEISPAVKLAGAMISHVTTELEITCLPKALPQFIEVDLANILAGASIHLADI 175
Query: 228 KV 229
K+
Sbjct: 176 KL 177
>gi|242280388|ref|YP_002992517.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio
salexigens DSM 2638]
gi|242123282|gb|ACS80978.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio
salexigens DSM 2638]
Length = 196
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 19/200 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T A R G + + R G VP +VF +DG++ ++SV N+ K+ +G
Sbjct: 6 TFKAELRTKTGKSANRQLRNQGMVP-VVFYSQDGEN----LVLSVNENEFVKMYRKVG-- 58
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+R+F LEV + LI KV++ P + P ++ FL + LK+DVP+
Sbjct: 59 --TTRVFSLEVDGK-TYDTLIWKVQMDPVRPR-------PNHIDFLGVSKDRTLKVDVPV 108
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
V G +PG++ GG + + + C A +P I V++ ++V + ++ +
Sbjct: 109 VTEGK--APGVKLGGRMAIYRPKLTVACTAATLPAEIVVNIDSMNVGDTVFVNEIDLGEG 166
Query: 233 LKLLRSKDEPVCKIAGGRAS 252
++ + + + A GR S
Sbjct: 167 ASVVFDNNFALVRCAAGRGS 186
>gi|260219880|emb|CBA26854.1| 50S ribosomal protein L25 [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 227
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLG 110
D +A RA GT S + R GR P IV+ GG + ++ + L L
Sbjct: 20 DMKFVAFERAKQGTGASRRLRITGRTPGIVY-------GGTGEPLLIELDH-NALWHALK 71
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
+ F S + D+E + + +VL R V +H L++ F R L + V
Sbjct: 72 KEAFHSTILDMEFNGK--------ESKVLLRDVQMHPYKQLVLHIDFQRVEANTKLSMRV 123
Query: 171 PLVFRGDDVSPGLRKGGYL-NTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLK 228
PL F G + SP ++ L N + ++ C PAD+ P +I VDLS L+ + + DL
Sbjct: 124 PLHFSGQENSPAVKTDACLINHVITELEVACLPADL-PEFIAVDLSGLEKGKSLHVNDLA 182
Query: 229 V 229
+
Sbjct: 183 L 183
>gi|134096054|ref|YP_001101129.1| 50S ribosomal protein L25 [Herminiimonas arsenicoxydans]
gi|166223689|sp|A4G921.1|RL25_HERAR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|133739957|emb|CAL63008.1| 50S ribosomal protein L25 (General stress protein CTC)
[Herminiimonas arsenicoxydans]
Length = 210
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S ++R AG P IV+ GG +++ + L L +
Sbjct: 3 VIAFARNDLGTGASRRQRIAGLTPGIVY-------GGTAAPVNISLDH-NALYHALKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + +VL R +H+ L+ F R + + + VPL
Sbjct: 55 FHSSILDLEVDGKVE--------QVLLRDFQVHAYKQLVLHADFQRVDAKQKIHVKVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F ++SP ++ + G ++ + + C +P +++VDL+ L+V I D+K+
Sbjct: 107 FINAEISPAVKLQAGIISHVATELDITCLPGNLPEFVEVDLATLEVGHSIHLADIKL 163
>gi|58696921|ref|ZP_00372422.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Drosophila simulans]
gi|58536851|gb|EAL60059.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Drosophila simulans]
Length = 203
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 16/189 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI A R T+ RK G +P I++ G+ N L T ++
Sbjct: 8 TINAELRDITKTKAMHSLRKKGNIPGIIY----GKGHDNVNL----TLSAKEFTKQYKSG 59
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ L +L + SG +K L R + LH D + F + +KID+PL
Sbjct: 60 SLSAHLIELNI-----SG---KKEYALVRDIQLHVVKDPVQHGDFQFDVKGSEIKIDIPL 111
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F + +PG++ GG LN + R++ C D +P I+VDLS + Q I D+K+
Sbjct: 112 SFVNESKAPGIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEG 171
Query: 233 LKLLRSKDE 241
+K + ++E
Sbjct: 172 VKFVAHEEE 180
>gi|71064751|ref|YP_263478.1| 50S ribosomal protein L25 [Psychrobacter arcticus 273-4]
gi|109893382|sp|Q4FVB4.1|RL25_PSYA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71037736|gb|AAZ18044.1| LSU ribosomal protein L25P [Psychrobacter arcticus 273-4]
Length = 224
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 16/167 (9%)
Query: 63 GTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLE 122
G S + RK VP+I++ GG ++ I++ +I +LV L F S + L
Sbjct: 19 GKGASRRLRKQNLVPAIIY-------GGGEQPIAISI-KINELVKSLEFEAFFSHILTLN 70
Query: 123 VRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPG 182
V E + +V+ + + H P++ F R + ++VP+ F G + +PG
Sbjct: 71 VDGE--------EHQVVIKDLQRHPAKGFPMHADFQRVVKGQKINMNVPVHFSGREEAPG 122
Query: 183 LRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+ GG L+T+ ++ +C +P Y+++D+S +++ D+K+
Sbjct: 123 TKAGGILSTLVTDIEIVCIPSQLPEYLEIDVSGMEIGDLFRLSDIKL 169
>gi|339324542|ref|YP_004684235.1| 50S ribosomal protein L25 [Cupriavidus necator N-1]
gi|338164699|gb|AEI75754.1| 50S ribosomal protein L25 [Cupriavidus necator N-1]
Length = 205
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 27/194 (13%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R+ GT S + R +G+ P I++ GG ++I + N + L +
Sbjct: 3 VVAFERSVQGTGASRRLRNSGKTPGIIY-------GGAAEPKMIELDHNALWHA---LKK 52
Query: 112 SFFVSRLFDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
F S + +LEV +SE + L R +H L+V F R + +
Sbjct: 53 EAFHSSILELEVAGKSE----------QALLRAFQMHPFKPLVLHVDFQRVSANDKIHVK 102
Query: 170 VPLVFRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
VPL F + +PG++ G G +N I ++ C PAD+ P +I+VDL+ ++ Q + D+
Sbjct: 103 VPLHFMNQETAPGVKLGHGIVNHIVNDLEVSCLPADL-PEFIEVDLAAAELNQTLHLSDI 161
Query: 228 KVHPALKLLRSKDE 241
K+ + ++ D+
Sbjct: 162 KLPKGVTVITHGDD 175
>gi|255003661|ref|ZP_05278625.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma
marginale str. Puerto Rico]
gi|255004786|ref|ZP_05279587.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma
marginale str. Virginia]
Length = 217
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA GT + R AG +P++V+ G N+ +++ + L F S+L
Sbjct: 14 RAKCGTGSARALRAAGLIPAVVY-------GKNRDAVNISLSHADFLKKCRTLPIF-SQL 65
Query: 119 FDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
L + + EF L +++ H + A +V F A +K++VPLVF
Sbjct: 66 IKLCIDGKEEFA----------LTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLN 115
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
+ G++ GG LN + R++ C D +P ++VDL +L + I DL + +++
Sbjct: 116 EQKCAGVKLGGALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVA 175
Query: 237 RSKDEPV 243
++ PV
Sbjct: 176 MKEENPV 182
>gi|56417306|ref|YP_154380.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma
marginale str. St. Maries]
gi|269958304|ref|YP_003328091.1| 50S ribosomal protein L25 [Anaplasma centrale str. Israel]
gi|68053041|sp|Q5P9A5.1|RL25_ANAMM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|56388538|gb|AAV87125.1| 50S ribosomal protein L25 [Anaplasma marginale str. St. Maries]
gi|269848133|gb|ACZ48777.1| 50S ribosomal protein L25 [Anaplasma centrale str. Israel]
Length = 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA GT + R AG +P++V+ G N+ +++ + L F S+L
Sbjct: 14 RAKCGTGSARALRAAGLIPAVVY-------GKNRDAVNISLSHADFLKKCRTLPIF-SQL 65
Query: 119 FDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
L + + EF L +++ H + A +V F A +K++VPLVF
Sbjct: 66 IKLCIDGKEEFA----------LTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLN 115
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
+ G++ GG LN + R++ C D +P ++VDL +L + I DL + +++
Sbjct: 116 EQKCAGVKLGGALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVA 175
Query: 237 RSKDEPV 243
++ PV
Sbjct: 176 MKEENPV 182
>gi|120555278|ref|YP_959629.1| 50S ribosomal protein L25/general stress protein Ctc [Marinobacter
aquaeolei VT8]
gi|387813299|ref|YP_005428781.1| 50S ribosomal protein L25, general stress protein CTC [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|166223694|sp|A1U373.1|RL25_MARAV RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|120325127|gb|ABM19442.1| LSU ribosomal protein L25P [Marinobacter aquaeolei VT8]
gi|381338311|emb|CCG94358.1| 50S ribosomal protein L25, general stress protein CTC [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 212
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 30/215 (13%)
Query: 51 DETILAIPRASPGTRVSVKERKAGR-VPSIVFEQEDGQHGGNKRL--ISVQTNQIRKLVG 107
D I A PR G S + R+ R +P+I++ GG K +++ N+++K +
Sbjct: 4 DFVIEAFPRDDQGKGASRRLRREERKIPAIIY-------GGGKDATPVAIWHNELKKAIE 56
Query: 108 HLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLK 167
+FF S + ++++ + K V+ + + H + FLR + +
Sbjct: 57 --NEAFF-SHILTVDIQGK--------KESVILKDLQRHPYKPILTHADFLRVDKDHEIH 105
Query: 168 IDVPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGD 226
++VPL F +D +P ++ +GG ++ V+ +C +P +I+VDL+E++++Q + D
Sbjct: 106 VNVPLHFINEDTAPAVKLQGGIVSHTMTEVEVICLPQNLPEFIEVDLNEVEMDQVVHLSD 165
Query: 227 LKVHPALKLL-----RSKDEPVCKI---AGGRASD 253
LK+ +K+ D PV I G +A D
Sbjct: 166 LKLPKGVKVAALQQGEDHDLPVASIHKPKGAKADD 200
>gi|357042740|ref|ZP_09104443.1| 50S ribosomal protein L25, Ctc-form [Prevotella histicola F0411]
gi|355369119|gb|EHG16521.1| 50S ribosomal protein L25, Ctc-form [Prevotella histicola F0411]
Length = 203
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 22/199 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFV 115
R G + S RK G VP ++ + H K L + +++RKLV + + V
Sbjct: 11 RTDLGKKASKHLRKEGLVPCNLYGE---AHKDGKPLALSFTASMSELRKLV-YTPHIYVV 66
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ D E + + +++ H TDA L+V F + + I VP+
Sbjct: 67 ELVIDGESHT------------AVLKELQFHPVTDALLHVDFYEVNDQKPITIGVPVKLV 114
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G ++ G+R GG +N R + + P +P ++D++++EL + + I GDL L+L
Sbjct: 115 G--LAQGVRDGGRMNLSIRKINVMAPYQQIPEHLDINVTELRLGKSIKVGDLSFE-GLEL 171
Query: 236 LRSKDEPVCKIAGGRASDQ 254
+ K+ VC I R S Q
Sbjct: 172 VTPKEVVVCSIKATRNSIQ 190
>gi|332527357|ref|ZP_08403413.1| 50S ribosomal protein L25/general stress protein Ctc [Rubrivivax
benzoatilyticus JA2]
gi|332111766|gb|EGJ11746.1| 50S ribosomal protein L25/general stress protein Ctc [Rubrivivax
benzoatilyticus JA2]
Length = 214
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 18/183 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ GT S + R A +VP IV+ G ++I + N L L + F
Sbjct: 5 AYERSVQGTGASRRLRNAAKVPGIVY------GAGEPKMIELDHNA---LFFALKKEAFH 55
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S + ++E+ + +EKV L R +H+ ++V F R L+ VPL F
Sbjct: 56 SSILEMELAGK------VEKV--LLRDFQMHAWKPIVMHVDFQRVDETTRLRKKVPLHFE 107
Query: 176 GDDVSPGLRKGGYL-NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
G++ SP ++ L + + ++ C A +P ++ +DLS L Q + DLK+ +K
Sbjct: 108 GEENSPAVKTDKCLVSHVATEIEIECLASQLPEFVTIDLSGLVKNQSLHLNDLKLPAGIK 167
Query: 235 LLR 237
+R
Sbjct: 168 AVR 170
>gi|254995469|ref|ZP_05277659.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma
marginale str. Mississippi]
Length = 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA GT + R AG +P++V+ G N+ +++ + L F S+L
Sbjct: 14 RAKCGTGSARALRAAGLIPAVVY-------GKNRDAVNISLSHADFLKKCRTLPIF-SQL 65
Query: 119 FDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
L + + EF L +++ H + A +V F A +K++VPLVF
Sbjct: 66 IKLCIDGKEEFA----------LTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLN 115
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
+ G++ GG LN + R++ C D +P ++VDL +L + I DL + +++
Sbjct: 116 EQKCAGVKLGGALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVA 175
Query: 237 RSKDEPV 243
++ PV
Sbjct: 176 MKEENPV 182
>gi|222475670|ref|YP_002564087.1| 50S ribosomal protein L25 [Anaplasma marginale str. Florida]
gi|254801033|sp|B9KHC7.1|RL25_ANAMF RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|222419808|gb|ACM49831.1| 50S ribosomal protein L25 (rplY) [Anaplasma marginale str. Florida]
Length = 218
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA GT + R AG +P++V+ G N+ +++ + L F S+L
Sbjct: 14 RAKCGTGSARALRAAGLIPAVVY-------GKNRDAVNISLSHADFLKKCRTLPIF-SQL 65
Query: 119 FDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
L + + EF L +++ H + A +V F A +K++VPLVF
Sbjct: 66 IKLCIDGKEEFA----------LTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLN 115
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
+ G++ GG LN + R++ C D +P ++VDL +L + I DL + +++
Sbjct: 116 EQKCAGVKLGGALNILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVA 175
Query: 237 RSKDEPV 243
++ PV
Sbjct: 176 MKEENPV 182
>gi|253999718|ref|YP_003051781.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylovorus
glucosetrophus SIP3-4]
gi|313201766|ref|YP_004040424.1| ribosomal 5S rRNA e-loop-binding protein ctc/l25/tl5 [Methylovorus
sp. MP688]
gi|253986397|gb|ACT51254.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylovorus
glucosetrophus SIP3-4]
gi|312441082|gb|ADQ85188.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylovorus
sp. MP688]
Length = 205
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 29/201 (14%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A+ R + GT S + R+AG+VP IV+ G +K +SV+
Sbjct: 5 ITAVKRENQGTGASRRLRRAGKVPGIVY-------GASKDAVSVE--------------- 42
Query: 114 FVSRLFDLEVRSEFGSGDLI------EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLK 167
F + LE R E ++ +K +V+ R +H + ++ F R L
Sbjct: 43 FDHKALFLEFRHEAFHASILTLNLDGKKEQVVLRDYQMHPVRNTIQHIDFQRVSATEKLH 102
Query: 168 IDVPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGD 226
+ VPL F D++PG++ GG + I C +P +I+VDL+ L+ I
Sbjct: 103 VKVPLHFINQDIAPGVKLSGGVVTHILTEADVSCLPKDLPEFIEVDLATLEAGHSIHLSQ 162
Query: 227 LKVHPALKLLRSKDEPVCKIA 247
+K+ ++ ++ E +A
Sbjct: 163 IKLPKGVEFVQLAHENDAAVA 183
>gi|56695714|ref|YP_166065.1| 50S ribosomal protein L25 [Ruegeria pomeroyi DSS-3]
gi|68053037|sp|Q5LV90.1|RL25_SILPO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|56677451|gb|AAV94117.1| ribosomal protein L25 [Ruegeria pomeroyi DSS-3]
Length = 207
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 15/165 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A+ R G + + R+ G VP IVF GG+ + +Q +L+ L
Sbjct: 8 LVALERTGTGKGAARQARRDGMVPGIVF-------GGDNEPLPIQI-PFNRLLKMLKAGR 59
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S LF+L+V E VRV+ R V D P ++ +R + +K+ + +
Sbjct: 60 FKSTLFNLKVEGH-------EDVRVICRDVQRDVVKDLPTHLDLMRLRRTSRIKLFIHVD 112
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDV 218
F +PGL+KGG L ++ V+ A +P I VDL+ L++
Sbjct: 113 FVNHAAAPGLKKGGVLTVVRPEVELEVTAGDIPESITVDLTGLNI 157
>gi|332528605|ref|ZP_08404587.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Hylemonella
gracilis ATCC 19624]
gi|332041921|gb|EGI78265.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Hylemonella
gracilis ATCC 19624]
Length = 218
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGR 111
+A RA GT S + R GR P IV+ GG LI + N + L +
Sbjct: 3 FVAFERAKQGTGASRRLRHTGRTPGIVY-------GGTVEPSLIELDHNALWHA---LKK 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + D+E+ + +VL R V +H L++ F R L + VP
Sbjct: 53 EAFHSSILDMELNGKSN--------QVLLRDVQMHPYKPLVLHIDFQRVDANTKLHMKVP 104
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSEL 216
L + G++ SP ++ +N I ++ C +P +I VDLS+L
Sbjct: 105 LHYSGEENSPAIKDKSLVNHIVTELEISCLPKDLPEFIAVDLSKL 149
>gi|407892573|ref|ZP_11151603.1| 50S ribosomal protein L25/general stress protein Ctc
[Diplorickettsia massiliensis 20B]
Length = 215
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 54 ILAIPRASPGTRVSVKERK-AGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
+ A R + GTR S + R+ ++P+I++ G I++ NQ+ K L
Sbjct: 7 LTAQTRKAFGTRASRRLRRLENQIPAILYGA-----GEPPLAITLSHNQVLKA---LENE 58
Query: 113 FFVSRLFDLEVRSEFGSGDL--IEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
F S + + V + L +++ PR +H+ LR + + + V
Sbjct: 59 AFYSHILTITVDGQAQKAVLKDLQRHAFKPRILHM----------DLLRVTAKEKITMSV 108
Query: 171 PLVFRGDDVSPGLRK-GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
PL F+G++V+PG+++ GG L + +V+ C D +P YI+VD+S L +++ I +L
Sbjct: 109 PLHFKGENVAPGVKEAGGVLAHLLNSVEVRCLPDALPEYIEVDVSRLGLDEAIEGLEL-- 166
Query: 230 HPALKLLRSKDEPVCKIAGGRASDQKKS 257
L L D PV I RA+ + ++
Sbjct: 167 ---LALSHDDDLPVVNIHLPRAATESET 191
>gi|254510687|ref|ZP_05122754.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium KLH11]
gi|221534398|gb|EEE37386.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium KLH11]
Length = 189
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 76 VPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEK 135
VP IVF GG+K + +Q +L L F S L++L+V E
Sbjct: 2 VPGIVF-------GGDKEPLPIQI-PFNELFKRLKAGRFKSTLWNLKVDGH-------ED 46
Query: 136 VRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRT 195
VRV+ R V D P ++ +R + + +P+ F ++ +PG++KGG L ++
Sbjct: 47 VRVICRDVQRDVVKDLPTHLDLMRLRRTTKIALFIPVEFINEEAAPGIKKGGVLTVVRPE 106
Query: 196 VKFLCPADIVPPYIDVDLSELDVEQKI 222
V+ LC A +P I VDL+ L++ +
Sbjct: 107 VELLCTAGDIPEKITVDLAGLEINDVV 133
>gi|88607427|ref|YP_505816.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma
phagocytophilum HZ]
gi|109893343|sp|Q2GII5.1|RL25_ANAPZ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|88598490|gb|ABD43960.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaplasma
phagocytophilum HZ]
Length = 211
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF-FVSR 117
R GT + R G +P++++ G N+ I++ +Q+ L R+F S+
Sbjct: 14 RERCGTGSARALRARGLIPAVIY-------GKNRDPINISLSQVDFL--KKCRTFPIFSK 64
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
L +L + + K V+ + + H + A +V F +A +K++VPLVF +
Sbjct: 65 LIELCIGEK--------KEYVITKDIQKHPVSGAIAHVDFQFVDQDAEMKMEVPLVFLNE 116
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
G+++GG +N + R++ C +P ++VDL ++ + + DLK+ + ++
Sbjct: 117 QKCVGVKRGGVINILHRSLIIRCSPHHIPKSLEVDLIDVAIGHSLHVSDLKLPSTINVVM 176
Query: 238 SKDEPVCKI----AGGRASDQKKS 257
+++PV GG + D +++
Sbjct: 177 KEEDPVIATVVASGGGISEDAEEA 200
>gi|339484791|ref|YP_004696577.1| 50S ribosomal protein L25 [Nitrosomonas sp. Is79A3]
gi|338806936|gb|AEJ03178.1| 50S ribosomal protein L25 [Nitrosomonas sp. Is79A3]
Length = 207
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 88/203 (43%), Gaps = 20/203 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R G S + R +G+VP+I++ GG + S++ + L L +
Sbjct: 5 ISADKRTLQGKGASRRLRGSGKVPAIIY-------GGEQEPQSIEMDH-NDLFHKLKQEA 56
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + L V + K +VL R + +H L+V F R + + VPL
Sbjct: 57 FHASILSLSVAGK--------KEQVLLRDIQMHPFKHQVLHVDFQRVDKNQKIHMKVPLH 108
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL---KV 229
F + +PG++ GG + I V C D +P +I VDLSEL + DL K
Sbjct: 109 FINAENAPGVKTSGGIVTHILTEVDISCLPDDLPEFISVDLSELTAGHTLHLSDLVLPKG 168
Query: 230 HPALKLLRSKDEPVCKIAGGRAS 252
+ L R + PV I R++
Sbjct: 169 VETIALARGDNSPVATIVIPRSA 191
>gi|29655127|ref|NP_820819.1| 50S ribosomal protein L25 [Coxiella burnetii RSA 493]
gi|153206163|ref|ZP_01945426.1| ribosomal protein L25, Ctc-form [Coxiella burnetii 'MSU Goat Q177']
gi|154705751|ref|YP_001423504.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella
burnetii Dugway 5J108-111]
gi|161830242|ref|YP_001597664.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella
burnetii RSA 331]
gi|165918238|ref|ZP_02218324.1| ribosomal protein L25, Ctc-form [Coxiella burnetii Q321]
gi|212211868|ref|YP_002302804.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella
burnetii CbuG_Q212]
gi|212217813|ref|YP_002304600.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella
burnetii CbuK_Q154]
gi|71153140|sp|Q83AP1.1|RL25_COXBU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189042351|sp|A9KF12.1|RL25_COXBN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189042352|sp|A9NAT6.1|RL25_COXBR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736301|sp|B6J9D8.1|RL25_COXB1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736302|sp|B6J329.1|RL25_COXB2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|29542396|gb|AAO91333.1| LSU ribosomal protein L25P [Coxiella burnetii RSA 493]
gi|120577293|gb|EAX33917.1| ribosomal protein L25, Ctc-form [Coxiella burnetii 'MSU Goat Q177']
gi|154355037|gb|ABS76499.1| LSU ribosomal protein L25P [Coxiella burnetii Dugway 5J108-111]
gi|161762109|gb|ABX77751.1| ribosomal protein L25, Ctc-form [Coxiella burnetii RSA 331]
gi|165918098|gb|EDR36702.1| ribosomal protein L25, Ctc-form [Coxiella burnetii Q321]
gi|212010278|gb|ACJ17659.1| LSU ribosomal protein L25P [Coxiella burnetii CbuG_Q212]
gi|212012075|gb|ACJ19455.1| LSU ribosomal protein L25P [Coxiella burnetii CbuK_Q154]
Length = 244
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 121 LEVRSEFGS------GDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVF 174
LE S F S GD +K +V+ + + H +++ F R L ++VPL F
Sbjct: 56 LESESTFSSILTLKVGD--KKQKVILKALQRHHTKPKIVHIDFQRIKASEKLIMNVPLHF 113
Query: 175 RGDDVSPGLRKGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
G+D PG+ GG ++ ++ V+ C PAD+ P YI+VDLS L +++ + +LK+ +
Sbjct: 114 LGEDDCPGVEAGGVVSHLQSEVEIRCLPADL-PEYIEVDLSHLQLDESVHLSNLKLPAGV 172
Query: 234 KLLRSKDE 241
L + DE
Sbjct: 173 GLTSAVDE 180
>gi|437999795|ref|YP_007183528.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|429339029|gb|AFZ83451.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
Length = 205
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A+ R GT S + R GRVP+I++ GGN ++++ + ++ L +
Sbjct: 3 INAVLRDKHGTSASRRLRHEGRVPAIIY-------GGNSLPMTMELDH-NEVYHALRKEK 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + + + G G +V+ R V H L++ F R + VPL
Sbjct: 55 FHSSILKIIIN---GKG----TEQVILRSVQWHPYKQQVLHIDFQRIDSNQEISTRVPLH 107
Query: 174 FRGDDVSPGLRKGG-YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F +++SP ++ GG + + + C D++P +IDVDLS +++ + D+K+
Sbjct: 108 FLNEEISPAVKVGGAIIRHVITELDITCMPDLLPQFIDVDLSYVNLGDSVHLLDIKL 164
>gi|395760759|ref|ZP_10441428.1| 50S ribosomal protein L25/general stress protein Ctc
[Janthinobacterium lividum PAMC 25724]
Length = 201
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R G+ S + R +G P IV+ +G L+S+ N + L +
Sbjct: 3 VIAFKRELQGSGASRRLRISGLTPGIVYGGAEG-----PVLVSLDHNALYHA---LKKEV 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLE+ D + + +VL R +H+ L+ F R + + + V L
Sbjct: 55 FHSSILDLEI-------DGVSQ-QVLLRDFQVHAYKQLVLHADFQRVDSKQAVHVKVALH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
F DVSP ++ G ++ + ++ C +P +I+VDLS +DV + GDL
Sbjct: 107 FINADVSPAVKLHGATISHVANEIEVSCLPGQLPEFINVDLSNIDVGHSLHIGDL 161
>gi|334132962|ref|ZP_08506717.1| 50S ribosomal protein L25 [Methyloversatilis universalis FAM5]
gi|333441872|gb|EGK69844.1| 50S ribosomal protein L25 [Methyloversatilis universalis FAM5]
Length = 202
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL--ISVQTNQIRKLVGHLGRSFFVS 116
R + GT S + R+A +VP+I++ GG+K I++ N+I L + F +
Sbjct: 10 RDAQGTGASRRLRRADQVPAIIY-------GGDKPATPITLDHNEIFHA---LRKEAFHA 59
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
+ L V K VL R +H+ L+V F R L VP F
Sbjct: 60 SVLTLNVEGT--------KETVLLRDTQMHAYKLQVLHVDFQRVDATHKLHTKVPFHFVN 111
Query: 177 DDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
D +PG++ +GG ++ + + C +P +I+VDLS L V Q I +K+ ++
Sbjct: 112 ADAAPGVKLQGGIVSHVMNELDVQCLPSQLPEFIEVDLSGLSVGQSIHVSQIKLPAGVEA 171
Query: 236 LRSKDEPVC 244
L +PV
Sbjct: 172 LTHGTDPVV 180
>gi|85707110|ref|ZP_01038198.1| ribosomal protein L25 [Roseovarius sp. 217]
gi|85668396|gb|EAQ23269.1| ribosomal protein L25 [Roseovarius sp. 217]
Length = 208
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A RA G + R+ G VP IVF GG+K + + L+ L + F
Sbjct: 10 AQERAGTGKGAARAARREGMVPGIVF-------GGDKEPLPINI-PFNALLKRLKKGRFK 61
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S LF+L+V + + VRV+ R V D P +V +R + + + + F
Sbjct: 62 STLFNLQVEGQ-------DDVRVICRDVQRDVVKDLPTHVDLMRLRRTTRINLFIHVDFI 114
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSEL 216
+ P LRKGG L ++ V+ A +P ++ VDLS++
Sbjct: 115 NHENCPALRKGGVLTVVRNEVELTVTAGDIPDHLTVDLSKI 155
>gi|410634150|ref|ZP_11344788.1| large subunit ribosomal protein L25 [Glaciecola arctica BSs20135]
gi|410146311|dbj|GAC21655.1| large subunit ribosomal protein L25 [Glaciecola arctica BSs20135]
Length = 217
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 19/177 (10%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G S + R AG+VP++++ G K +S+ N KL G
Sbjct: 7 TLDAEIRTDLGKGASRRLRHAGKVPAVLY-------GAGKEAVSLTLNH-NKLFQAQGFE 58
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F S + L + E KV VL + + H+ +++ FLR + L+ +VPL
Sbjct: 59 AFYSHVLTLNIGKE--------KVEVLVKDMQRHAFKPVVMHLDFLRVDAKVALQTNVPL 110
Query: 173 VFRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
F ++ + ++ GG+ V+ C P D+ P YI+VDL ++++Q I DL
Sbjct: 111 HFINEEKAESIKLNGGHAEHHMVDVEVSCLPGDL-PEYIEVDLINIELDQTIHLTDL 166
>gi|126727672|ref|ZP_01743504.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Rhodobacterales bacterium HTCC2150]
gi|126703088|gb|EBA02189.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Rhodobacterales bacterium HTCC2150]
Length = 217
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 16/190 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G + + R+ G VP V+ GG + I+++ L L F++ L
Sbjct: 13 RTGTGKGAARQSRRDGNVPGTVY-------GGGQDPIAIEI-PFNALFKRLKAGRFLATL 64
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
F+L++ + E VRV+ R V D P+++ +R ++ + + + + F +
Sbjct: 65 FNLKIEGQ-------EDVRVVCRDVQRDKVKDLPIHLDLMRLRRDSRVAMSITVEFINHE 117
Query: 179 VSPGL-RKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
SPGL +GG LNT++ V+ A +P +I VDL+ L+V I D+ + +
Sbjct: 118 ESPGLANQGGSLNTVRPEVELSVIASDIPDHITVDLAGLNVGATISISDIDLPKGAEPTI 177
Query: 238 SKDEPVCKIA 247
+D + IA
Sbjct: 178 ERDFIIATIA 187
>gi|344941072|ref|ZP_08780360.1| 50S ribosomal protein L25 [Methylobacter tundripaludum SV96]
gi|344262264|gb|EGW22535.1| 50S ribosomal protein L25 [Methylobacter tundripaludum SV96]
Length = 199
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 21/203 (10%)
Query: 55 LAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFF 114
+A R G + + R+AG VP++++ G HG +++ + N++ K HL
Sbjct: 8 VAESRGQSGKSAARRARRAGNVPAVIY----GGHG-EPQMLLLNHNEVIK---HLAHEAV 59
Query: 115 VSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVF 174
S + + + + RV+ + V H L++ FLR LK+ VPL F
Sbjct: 60 YSHVLGVNIDGK--------TERVVLKGVQRHPAKFQVLHMDFLRVTMSEALKVHVPLHF 111
Query: 175 RGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
+ S G +KGG + V+ C +P YI+VDL LD+ + D+ + ++
Sbjct: 112 VNEQTSVGGKKGGIVTHAMIDVEVSCLPAALPDYIEVDLGGLDIGESAHLSDIVLPAGVE 171
Query: 235 LL-----RSKDEPVCKIAGGRAS 252
++ D PV + +AS
Sbjct: 172 IVALAQGSEHDHPVASMMASKAS 194
>gi|451812698|ref|YP_007449151.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|451778667|gb|AGF49547.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 209
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A+ R GT S + R GRVP+I++ GGN ++++ + ++ L +
Sbjct: 7 INAVLRDKHGTSASRRLRHEGRVPAIIY-------GGNSLPMTMELDH-NEVYHALRKEK 58
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + + + G G +V+ R V H L++ F R + VPL
Sbjct: 59 FHSSILKIIIN---GKG----TEQVILRSVQWHPYKQQVLHIDFQRIDSNQEISTRVPLH 111
Query: 174 FRGDDVSPGLRKGG-YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F +++SP ++ GG + + + C D++P +IDVDLS +++ + D+K+
Sbjct: 112 FLNEEISPAVKVGGAIIRHVITELDITCMPDLLPQFIDVDLSYVNLGDSVHLLDIKL 168
>gi|74316406|ref|YP_314146.1| 50S ribosomal protein L25 [Thiobacillus denitrificans ATCC 25259]
gi|109893403|sp|Q3SLR4.1|RL25_THIDA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|74055901|gb|AAZ96341.1| Ribosomal protein L25 [Thiobacillus denitrificans ATCC 25259]
Length = 201
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 17/175 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R AG+VP IV+ GG+ + ++ + L L +
Sbjct: 5 VIASKRELQGTGASRRLRHAGKVPGIVY-------GGSTAPVQIELDH-NALYHALRKEA 56
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + L V K VL R H L+V F R + + + VPL
Sbjct: 57 FHASVLSLSVDGA--------KESVLLRDAQWHPYKQQVLHVDFQRVDKDHKIHVKVPLH 108
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
F +VSPG++ GG + I + C +P +I+VD+ L+V I A DL
Sbjct: 109 FLNAEVSPGVKLGGGKPHHIVNELDVQCFPGSLPEFIEVDMGALEVGHSIHANDL 163
>gi|385330447|ref|YP_005884398.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter
adhaerens HP15]
gi|311693597|gb|ADP96470.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter
adhaerens HP15]
Length = 223
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 27/209 (12%)
Query: 53 TILAIPRASPGTRVSVKERKAGR-VPSIVFEQEDGQHGGNKRL--ISVQTNQIRKLVGHL 109
I A PR G S + R+ R +P+I++ GGNK I++ N+++K L
Sbjct: 13 VIEAFPRDDQGRGASRRLRREERKIPAIIY-------GGNKDATPIAIWHNELKKA---L 62
Query: 110 GRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
F S + +E+ + K V+ + + H + FLR + + ++
Sbjct: 63 ENEAFFSHVLTVELNGK--------KESVILKDLQRHPYKPILTHADFLRVDKDHEIHVN 114
Query: 170 VPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
VPL F +D +P ++ GG N V+ +C +P +I+VD++ ++++Q + DLK
Sbjct: 115 VPLHFINEDTAPAIKLHGGVANHQINEVEVICLPQNLPEFIEVDMTTVEMDQVVHLSDLK 174
Query: 229 VHPALK---LLRSKDE--PVCKIAGGRAS 252
+ +K LL+ +D PV I R +
Sbjct: 175 LPKDVKIAALLQGEDHDLPVVAIHKPRGA 203
>gi|333384107|ref|ZP_08475750.1| 50S ribosomal protein L25 [Dysgonomonas gadei ATCC BAA-286]
gi|332826853|gb|EGJ99653.1| 50S ribosomal protein L25 [Dysgonomonas gadei ATCC BAA-286]
Length = 193
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 25/198 (12%)
Query: 58 PRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTN-QIRKLVGHLGRSFFVS 116
R G + + RK ++P++++ G +K + + TN ++RKL+ +
Sbjct: 10 ARTDLGKKATKAFRKEDKIPAVIY----GGEKADKAIHFIVTNSEVRKLI-------YTP 58
Query: 117 RLF--DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVF 174
+F DL V + + + + + +H TD L++ FL + IDVP+V
Sbjct: 59 EIFLVDLTVGKD--------NYKAILKDIQVHPVTDEILHLDFLHVFENKPITIDVPVVL 110
Query: 175 RGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
D ++ G++ GG L+ R +K D VP + VD+S L + + I G+L L+
Sbjct: 111 --DGLAEGVKAGGKLSLDLRKLKVRALYDKVPEKVHVDVSGLALGKSIQVGELHF-EGLE 167
Query: 235 LLRSKDEPVCKIAGGRAS 252
LL +K+ VC++ RA+
Sbjct: 168 LLNAKNGVVCRVQLTRAA 185
>gi|359799752|ref|ZP_09302305.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
arsenitoxydans SY8]
gi|359362178|gb|EHK63922.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
arsenitoxydans SY8]
Length = 202
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 86/175 (49%), Gaps = 16/175 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ G+ S + R+AGRVP+IV+ GG+ ++++ + ++ L + F
Sbjct: 5 ATARSVQGSSASRRLRRAGRVPAIVY-------GGSAAPLNIELDH-NEIYHALRKEEFH 56
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + +++ D + +VL R V H+ L+V F R L+ VPL F
Sbjct: 57 ASILQMQL-------DGAKDEQVLLRSVQWHAYKPQVLHVDFQRVDANQALRTKVPLHFV 109
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+VSP ++ G ++ + ++ C +PP+I+++L+++ + D+K+
Sbjct: 110 NAEVSPAVKLSGAIISHVTTELEITCLPSALPPFIEINLADVLAGGSVHLADIKL 164
>gi|421478199|ref|ZP_15925966.1| ribosomal protein L25, Ctc-form [Burkholderia multivorans CF2]
gi|400225057|gb|EJO55242.1| ribosomal protein L25, Ctc-form [Burkholderia multivorans CF2]
Length = 205
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 21/177 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R GT S + R AG+ IV+ GG ++I + N + L +
Sbjct: 7 VVAFERKEQGTGASRRLRNAGKTTGIVY-------GGEAAPQMIELDHNALWHA---LKK 56
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + DLEV + +VL R V H L+V F R + L VP
Sbjct: 57 EAFHSSILDLEVAGQ--------SQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVP 108
Query: 172 LVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
L F +VSP ++ ++ + ++ C +P +++VDLS+++ Q I A D+
Sbjct: 109 LHFLNAEVSPAVKLSSAVVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSIHAKDI 165
>gi|451811239|ref|YP_007447694.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|451776397|gb|AGF47396.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 202
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 25/183 (13%)
Query: 49 RYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGH 108
++D T+ R+ GT S R GR+P+IV+ G N ++++
Sbjct: 2 KFDATL----RSVHGTSASRHLRHKGRIPAIVY-------GKNSSPLNIE---------- 40
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRV---LPRKVHLHSGTDAPLNVTFLRAPPEAL 165
L ++ L E S S ++++ +V + R V H L+V F R
Sbjct: 41 LDHNYIYHALRKEEFHSSVLSMNILDSKKVEQVILRSVQWHPYKQQVLHVDFQRVSANQN 100
Query: 166 LKIDVPLVFRGDDVSPGLRKGG-YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILA 224
+ VPL F + SP ++ GG +N + ++ C ++PP+I++DLS +++ I
Sbjct: 101 INTKVPLHFLNAETSPAVKLGGAIINHVITELEISCLPAVLPPFIEIDLSNIELGNSIHF 160
Query: 225 GDL 227
D+
Sbjct: 161 SDI 163
>gi|345865808|ref|ZP_08817977.1| 50S ribosomal protein L25 [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345123074|gb|EGW52985.1| 50S ribosomal protein L25 [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 162
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 83/168 (49%), Gaps = 14/168 (8%)
Query: 94 LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPL 153
+IS+ N+ L+ HL F S + +L+V GD E+V + + + H +
Sbjct: 1 MISLAHNE---LILHLDHEAFYSHILNLKV------GDATEQVVL--KDLQRHPAKPFIM 49
Query: 154 NVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDL 213
++ F R +++ VPL F + +PG + GG + + V+ C +P +I+VD+
Sbjct: 50 HIDFQRISAGEKIRMQVPLHFTNQETAPGTKAGGQASHMLSDVEITCLPKDLPEFIEVDM 109
Query: 214 SELDVEQKILAGDLKVHPALKLLRSKDEPVCKI---AGGRASDQKKSK 258
E++V I +LK+ ++L S+ E + +G A+D+ +++
Sbjct: 110 GEMNVGDAIHLSELKLPAGVELPSSEHEDTIVVNIHSGHAAADEDETE 157
>gi|255526076|ref|ZP_05392999.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium
carboxidivorans P7]
gi|296187125|ref|ZP_06855523.1| ribosomal protein L25, Ctc-form [Clostridium carboxidivorans P7]
gi|255510262|gb|EET86579.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium
carboxidivorans P7]
gi|296048319|gb|EFG87755.1| ribosomal protein L25, Ctc-form [Clostridium carboxidivorans P7]
Length = 202
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 69 KERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFG 128
KERK+G++P I++ + N + + ++ K + G LEV E G
Sbjct: 19 KERKSGKIPGIIYGK-----NINNLMFEIGELELNKKISSTGEHGV------LEV--ELG 65
Query: 129 SGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGY 188
S EK L R+V + +++ P ++ DVP++F G+D RKGG
Sbjct: 66 S----EKHSTLIREVQRNPVNHKIIHIDLEEIPKNQAIQTDVPILFMGEDFVS--RKGGV 119
Query: 189 LNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
+ + VK C + +P +IDVD+S+L++ D+++ + +
Sbjct: 120 VQKERTNVKVQCKYEYIPKHIDVDVSKLEIGDSYRVADIELSQEITFI 167
>gi|149378000|ref|ZP_01895725.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter
algicola DG893]
gi|149357709|gb|EDM46206.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter
algicola DG893]
Length = 217
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGR-VPSIVFEQEDGQHGGNKRL--ISVQTNQIRKLVGHLG 110
I A PR G S + R+ R +P+I++ GG K IS+ N+++K L
Sbjct: 7 IEAFPRGDQGRGASRRLRREERKIPAIIY-------GGKKEATAISIWHNELKKA---LE 56
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
F S + +E+ + K V+ + + H + FLR + + ++V
Sbjct: 57 NEAFFSHILTIELEGK--------KESVILKDLQRHPYKPLLTHADFLRVDKDHEIHVNV 108
Query: 171 PLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
PL F ++ +P ++ +GG N V+ +C +P +++VD++ ++++Q + DLK+
Sbjct: 109 PLHFLNEESAPAIKLQGGVANHQINEVEVICLPQNLPEFLEVDMTSVEMDQVVHLSDLKL 168
Query: 230 HPALK---LLRSKDE--PVCKIAGGRAS 252
++ LL+ +D PV I RA+
Sbjct: 169 PKGVRIAALLQGEDHDLPVVAIHKPRAA 196
>gi|126454225|ref|YP_001064867.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1106a]
gi|134279781|ref|ZP_01766493.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 305]
gi|217420309|ref|ZP_03451815.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 576]
gi|226199547|ref|ZP_03795104.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pakistan 9]
gi|242314590|ref|ZP_04813606.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1106b]
gi|251767336|ref|ZP_02266847.2| 50S ribosomal protein L25 [Burkholderia mallei PRL-20]
gi|403517240|ref|YP_006651373.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei BPC006]
gi|68053086|sp|Q63XL9.1|RL25_BURPS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|109893348|sp|Q3JW87.2|RL25_BURP1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|52208574|emb|CAH34510.1| ribosomal L25p family protein [Burkholderia pseudomallei K96243]
gi|126227867|gb|ABN91407.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1106a]
gi|134248981|gb|EBA49063.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 305]
gi|217397613|gb|EEC37629.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 576]
gi|225928428|gb|EEH24458.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pakistan 9]
gi|242137829|gb|EES24231.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1106b]
gi|243063117|gb|EES45303.1| 50S ribosomal protein L25 [Burkholderia mallei PRL-20]
gi|403072883|gb|AFR14463.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei BPC006]
Length = 208
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 28/210 (13%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R GT S + R AG+ IV+ GG ++I + N + L +
Sbjct: 7 VVAFERQQQGTGASRRLRNAGKTTGIVY-------GGEAAPQMIELDHNALWHA---LKK 56
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + DLEV + RVL R V H L+V F R P+ L P
Sbjct: 57 EAFHSSILDLEVAGK--------SQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAP 108
Query: 172 LVFRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
L F + SP ++ ++ + ++ C PAD+ P +++VDLS+++ Q + A D+ +
Sbjct: 109 LHFLNAETSPAVKLSSAVVSHVVTEIEIECLPADL-PEFLEVDLSKIEAGQSLHAKDIAL 167
Query: 230 HPALKLLRSKD--EPV---CKIAGGRASDQ 254
+ L D PV I G SD+
Sbjct: 168 PNGVALTAHVDAENPVIASATIPAGAVSDE 197
>gi|254450901|ref|ZP_05064338.1| ribosomal protein L25, Ctc-form [Octadecabacter arcticus 238]
gi|198265307|gb|EDY89577.1| ribosomal protein L25, Ctc-form [Octadecabacter arcticus 238]
Length = 215
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 19/193 (9%)
Query: 48 PRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVG 107
P ++ T+ R G + + R+ G VP +V+ GG + IS+ L+
Sbjct: 6 PDFEATL----RTDTGKGAARQARRDGLVPGVVY-------GGGEDPISINV-PFNVLLK 53
Query: 108 HLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLK 167
L F+S LF+L+V + VRV+ R V H D P ++ F+R +
Sbjct: 54 RLKAGRFLSTLFNLKVEGH-------DDVRVICRNVQRHIVKDLPTHLDFMRLKRTTKIN 106
Query: 168 IDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
+ + + F ++ P L++GG L ++ V+ + A +P + VDL+ L++ I +
Sbjct: 107 LFIGVEFINEEDCPALKEGGVLIPVRNEVELIVTAGDIPEVLTVDLTGLELGDTITISSI 166
Query: 228 KVHPALKLLRSKD 240
K+ K +D
Sbjct: 167 KLPAGAKATIDRD 179
>gi|89069015|ref|ZP_01156396.1| ribosomal protein L25 [Oceanicola granulosus HTCC2516]
gi|89045384|gb|EAR51449.1| ribosomal protein L25 [Oceanicola granulosus HTCC2516]
Length = 210
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 101 QIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRA 160
+ L+ L + F+S LF+L+V E + VRV+ R V D P +V F+R
Sbjct: 47 EYNSLLTRLRKGRFLSTLFNLKVEGE-------DDVRVICRGVQRDVVKDLPTHVDFMRL 99
Query: 161 PPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQ 220
+ + + +P+ F +PG+++GG L ++ V+ + A +P I VDL+ L++
Sbjct: 100 RRTSKVNLFIPVEFENHGAAPGIKRGGVLTVVRPEVELVVTAGDIPEKITVDLTGLEIGD 159
Query: 221 KILAGDLKVHPALKLLRSKDEPVCKI---AGGRASD 253
+ + + K +D + + +G RASD
Sbjct: 160 TVTISSVDLPEGAKPTIDRDFVIANVSAPSGLRASD 195
>gi|423014088|ref|ZP_17004809.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
xylosoxidans AXX-A]
gi|338783019|gb|EGP47388.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
xylosoxidans AXX-A]
Length = 204
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 16/175 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ G+ S + R+AGRVP+IV+ GG ++++ + ++ L + F
Sbjct: 5 ATARSVQGSSASRRLRRAGRVPAIVY-------GGTAAPLNIELDH-NEIYHALRKEEFH 56
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + +++ G+ D +VL R V H+ L+V F R L+ VPL F
Sbjct: 57 ASILQMQLE---GAKD----EQVLLRSVQWHAYKPQVLHVDFQRVDANQALRTKVPLHFV 109
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+VSP ++ G ++ + ++ C +P +I+V+L+++ I D+K+
Sbjct: 110 NAEVSPAVKLSGAIISHVANELEITCLPSALPQFIEVNLADILAGASIHLADIKL 164
>gi|421486681|ref|ZP_15934217.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
piechaudii HLE]
gi|400194986|gb|EJO27986.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
piechaudii HLE]
Length = 202
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 16/176 (9%)
Query: 55 LAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFF 114
+A R+ G+ S + R+AGRVP+IV+ GG ++++ + ++ L + F
Sbjct: 4 IATARSVQGSSASRRLRRAGRVPAIVY-------GGTAAPLNIELDH-NEIYHALRKEEF 55
Query: 115 VSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVF 174
+ + +++ ++ +VL R V H+ L+V F R L+ VPL F
Sbjct: 56 HASILQMQLEGA-------KEEQVLLRSVQWHAYKPQVLHVDFQRVDANQALRTKVPLHF 108
Query: 175 RGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
++SP ++ G ++ + ++ C +P +I+VDL+ + I D+K+
Sbjct: 109 VNAEISPAVKLSGAIISHVTTELEITCLPKALPQFIEVDLTNILAGASIHLADIKL 164
>gi|389873391|ref|YP_006380810.1| 50S ribosomal protein L25/general stress protein Ctc [Advenella
kashmirensis WT001]
gi|388538640|gb|AFK63828.1| 50S ribosomal protein L25/general stress protein Ctc [Advenella
kashmirensis WT001]
Length = 215
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ G+ S + R+AGRVP+IV+ GG S++ + ++ L + F
Sbjct: 5 ATTRSVQGSSASRRLRRAGRVPAIVY-------GGKGEAQSIELDH-NEIFHALRKEPFH 56
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + D+ + + K VL R V HS L+V F R L +P F
Sbjct: 57 TSVLDMMLDGK--------KQTVLLRAVQWHSYKPLVLHVDFQRVSANEALTTRIPFHFI 108
Query: 176 GDDVSPGLRK-GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
D SP +++ G ++ + ++ C +P +I+VDL L + + D+KV ++
Sbjct: 109 NGDESPAVKQQGATISHVLNDIEITCLPKDLPQFIEVDLGNLQANEVVHLSDVKVPAGVE 168
Query: 235 LLRSKDE-PVCKIA 247
+ +E PV A
Sbjct: 169 FVGVGEESPVLATA 182
>gi|221199984|ref|ZP_03573027.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2M]
gi|221206861|ref|ZP_03579873.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2]
gi|221211192|ref|ZP_03584171.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD1]
gi|421468742|ref|ZP_15917262.1| ribosomal protein L25, Ctc-form [Burkholderia multivorans ATCC
BAA-247]
gi|221168553|gb|EEE01021.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD1]
gi|221173516|gb|EEE05951.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2]
gi|221180223|gb|EEE12627.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2M]
gi|400231324|gb|EJO61026.1| ribosomal protein L25, Ctc-form [Burkholderia multivorans ATCC
BAA-247]
Length = 205
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 21/177 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R GT S + R AG+ IV+ GG ++I + N + L +
Sbjct: 7 VVAFERKEQGTGASRRLRNAGKTTGIVY-------GGEAAPQMIELDHNALWHA---LKK 56
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + DLEV + +VL R V H L+V F R + L VP
Sbjct: 57 EAFHSSILDLEVAGQ--------SQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVP 108
Query: 172 LVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
L F +VSP ++ ++ + ++ C +P +++VDLS+++ Q I A D+
Sbjct: 109 LHFLNAEVSPAVKLSSAIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSIHAKDI 165
>gi|76578961|gb|ABA48436.1| ribosomal protein L25, Ctc-form [Burkholderia pseudomallei 1710b]
Length = 223
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R AG+ IV+ E ++I + N + L +
Sbjct: 22 VVAFERQQQGTGASRRLRNAGKTTGIVYGGE-----AAPQMIELDHNALWHA---LKKEA 73
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + RVL R V H L+V F R P+ L PL
Sbjct: 74 FHSSILDLEVAGK--------SQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLH 125
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
F + SP ++ ++ + ++ C PAD+ P +++VDLS+++ Q + A D+ +
Sbjct: 126 FLNAETSPAVKLSSAVVSHVVTEIEIECLPADL-PEFLEVDLSKIEAGQSLHAKDIALPN 184
Query: 232 ALKLLRSKD--EPV---CKIAGGRASDQ 254
+ L D PV I G SD+
Sbjct: 185 GVALTAHVDAENPVIASATIPAGAVSDE 212
>gi|53724085|ref|YP_104605.1| 50S ribosomal protein L25 [Burkholderia mallei ATCC 23344]
gi|121600473|ref|YP_991440.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
mallei SAVP1]
gi|126449568|ref|YP_001082450.1| 50S ribosomal protein L25 [Burkholderia mallei NCTC 10247]
gi|161723210|ref|YP_107146.2| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei K96243]
gi|162210089|ref|YP_332166.2| 50S ribosomal protein L25 [Burkholderia pseudomallei 1710b]
gi|167718014|ref|ZP_02401250.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei DM98]
gi|167737031|ref|ZP_02409805.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 14]
gi|167814140|ref|ZP_02445820.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 91]
gi|167822665|ref|ZP_02454136.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 9]
gi|167844236|ref|ZP_02469744.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei B7210]
gi|167892746|ref|ZP_02480148.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 7894]
gi|167901242|ref|ZP_02488447.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei NCTC 13177]
gi|167909460|ref|ZP_02496551.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 112]
gi|167917488|ref|ZP_02504579.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei BCC215]
gi|237810771|ref|YP_002895222.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei MSHR346]
gi|254181866|ref|ZP_04888463.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1655]
gi|254187800|ref|ZP_04894312.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pasteur 52237]
gi|254201692|ref|ZP_04908056.1| 50S ribosomal protein L25 [Burkholderia mallei FMH]
gi|254207026|ref|ZP_04913377.1| 50S ribosomal protein L25 [Burkholderia mallei JHU]
gi|254296082|ref|ZP_04963539.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 406e]
gi|68053085|sp|Q62FC2.1|RL25_BURMA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166223666|sp|A3MQB4.1|RL25_BURM7 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166223667|sp|A1UZN7.1|RL25_BURMS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|52427508|gb|AAU48101.1| ribosomal protein L25 [Burkholderia mallei ATCC 23344]
gi|121229283|gb|ABM51801.1| 50S ribosomal protein L25 [Burkholderia mallei SAVP1]
gi|126242438|gb|ABO05531.1| 50S ribosomal protein L25 [Burkholderia mallei NCTC 10247]
gi|147747586|gb|EDK54662.1| 50S ribosomal protein L25 [Burkholderia mallei FMH]
gi|147752568|gb|EDK59634.1| 50S ribosomal protein L25 [Burkholderia mallei JHU]
gi|157805601|gb|EDO82771.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 406e]
gi|157935480|gb|EDO91150.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pasteur 52237]
gi|184212404|gb|EDU09447.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1655]
gi|237505924|gb|ACQ98242.1| ribosomal protein L25, Ctc-form [Burkholderia pseudomallei MSHR346]
Length = 204
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R AG+ IV+ E ++I + N + L +
Sbjct: 3 VVAFERQQQGTGASRRLRNAGKTTGIVYGGE-----AAPQMIELDHNALWHA---LKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + RVL R V H L+V F R P+ L PL
Sbjct: 55 FHSSILDLEVAGK--------SQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
F + SP ++ ++ + ++ C PAD+ P +++VDLS+++ Q + A D+ +
Sbjct: 107 FLNAETSPAVKLSSAVVSHVVTEIEIECLPADL-PEFLEVDLSKIEAGQSLHAKDIALPN 165
Query: 232 ALKLLRSKD--EPV---CKIAGGRASDQKKS 257
+ L D PV I G SD+ +
Sbjct: 166 GVALTAHVDAENPVIASATIPAGAVSDEAAA 196
>gi|257140316|ref|ZP_05588578.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
thailandensis E264]
gi|109893350|sp|Q2T1B8.2|RL25_BURTA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
Length = 208
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 23/178 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R GT S + R AG+ IV+ GG ++I + N + L +
Sbjct: 7 VVAFERQQQGTGASRRLRNAGKTTGIVY-------GGEAAPQMIELDHNALWHA---LKK 56
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + DLEV + RVL R V H L+V F R P+ L VP
Sbjct: 57 EAFHSSILDLEVAGK--------SQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKVP 108
Query: 172 LVFRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
L F + SP ++ ++ + ++ C PAD+ P +++VDLS+++ Q + A D+
Sbjct: 109 LHFLNAESSPAVKLSSAVVSHVVTEIEVECLPADL-PEFLEVDLSKIEAGQSLHAKDI 165
>gi|422319804|ref|ZP_16400877.1| 50S ribosomal protein L25 [Achromobacter xylosoxidans C54]
gi|317405479|gb|EFV85788.1| 50S ribosomal protein L25 [Achromobacter xylosoxidans C54]
Length = 204
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 16/175 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ G+ S + R+AGRVP+IV+ GG+ ++++ + ++ L + F
Sbjct: 5 ATARSVQGSSASRRLRRAGRVPAIVY-------GGSAAPLNIELDH-NEIYHALRKEEFH 56
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + +++ G+ D +VL R V H+ L+V F R L+ VPL F
Sbjct: 57 ASILQMQLE---GAKD----EQVLLRSVQWHAYKPQVLHVDFQRVDANQALRTKVPLHFV 109
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+VSP ++ G ++ + ++ C +P +I+V+L+++ I D+K+
Sbjct: 110 NAEVSPAVKLSGAIISHVATELEITCLPSALPQFIEVNLADILAGASIHLADIKL 164
>gi|161523692|ref|YP_001578704.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
multivorans ATCC 17616]
gi|189351544|ref|YP_001947172.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
multivorans ATCC 17616]
gi|226736290|sp|A9AEY7.1|RL25_BURM1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|160341121|gb|ABX14207.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
multivorans ATCC 17616]
gi|189335566|dbj|BAG44636.1| large subunit ribosomal protein L25 [Burkholderia multivorans ATCC
17616]
Length = 201
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 21/177 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R GT S + R AG+ IV+ GG ++I + N + L +
Sbjct: 3 VVAFERKEQGTGASRRLRNAGKTTGIVY-------GGEAAPQMIELDHNALWHA---LKK 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + DLEV + +VL R V H L+V F R + L VP
Sbjct: 53 EAFHSSILDLEVAGQ--------SQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVP 104
Query: 172 LVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
L F +VSP ++ ++ + ++ C +P +++VDLS+++ Q I A D+
Sbjct: 105 LHFLNAEVSPAVKLSSAIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSIHAKDI 161
>gi|282879284|ref|ZP_06288029.1| ribosomal protein L25, Ctc-form [Prevotella buccalis ATCC 35310]
gi|281298566|gb|EFA90990.1| ribosomal protein L25, Ctc-form [Prevotella buccalis ATCC 35310]
Length = 217
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVF--EQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVS 116
R G + S + RK G VP ++ Q DG+ + +++RK+V +
Sbjct: 11 REDLGKKASKQLRKEGYVPCNIYGAAQADGK--PEALAFAAPMSELRKVV-------YTP 61
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
++ + + + S I K ++ H TDA L+V F + + I +P+ G
Sbjct: 62 HIYVINLNIDGESHTAILK------ELQFHPVTDALLHVDFYAVNDQKPITIGIPVKLVG 115
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
++ G+R GG +N R V P +P ++D+D++ L + + I G L L++
Sbjct: 116 --LAQGVRDGGRMNLSIRKVNVTAPYQRIPEHLDIDVTNLKIGKSIKVGQLNFE-GLEMA 172
Query: 237 RSKDEPVCKIAGGRASD 253
SKD VC I RA++
Sbjct: 173 TSKDVVVCSIKMTRAAN 189
>gi|120612258|ref|YP_971936.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
citrulli AAC00-1]
gi|166223655|sp|A1TT74.1|RL25_ACIAC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|120590722|gb|ABM34162.1| LSU ribosomal protein L25P [Acidovorax citrulli AAC00-1]
Length = 210
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLG 110
+A RA GT S + R +G+ P IV+ GG+ +LI V N L L
Sbjct: 2 NFVAFERAKQGTGASRRLRNSGKTPGIVY-------GGSAEPQLIEVDHN---ALWHALK 51
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
+ F S + D+E+ + +VL R V H L++ F R + L + V
Sbjct: 52 KEAFHSSVLDMELAGKTS--------KVLLRDVQYHPYKQLVLHIDFQRVDEKTKLHMKV 103
Query: 171 PLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
PL F G + SP ++ +N + + C +P +I+VDLS+L+ + + D+K+
Sbjct: 104 PLHFTGAEESPAVKIDKCMVNPVATELDVSCMPSDLPEFINVDLSKLEKGRSLHLKDIKL 163
>gi|291614810|ref|YP_003524967.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sideroxydans
lithotrophicus ES-1]
gi|291584922|gb|ADE12580.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sideroxydans
lithotrophicus ES-1]
Length = 220
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 20/178 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R + GT S + RK RVP IV+ G +I + N + L
Sbjct: 5 ISATTRKAQGTGASRRLRKTNRVPGIVYG------AGEATMIELDHNTLYYA---LRNEA 55
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + LE+ + K VL R +H ++ F R + + + VPL
Sbjct: 56 FHASILSLELDGK--------KQSVLLRDFQMHPFRQQVQHIDFQRVDAKKKVHMKVPLH 107
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
F DV+PG++ GG ++ + ++ +C PAD+ P I+VDLS L++ + D+K+
Sbjct: 108 FLNADVAPGVKVGGGIISHVLNELEIVCLPADL-PAAIEVDLSGLELGHSVHVSDVKL 164
>gi|297722347|ref|NP_001173537.1| Os03g0612600 [Oryza sativa Japonica Group]
gi|255674701|dbj|BAH92265.1| Os03g0612600, partial [Oryza sativa Japonica Group]
Length = 66
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 44/61 (72%), Gaps = 3/61 (4%)
Query: 192 IKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDE--PVCKIAGG 249
I+ ++ +LCPA+ +PP I+VDL+ LD+ ++ D+ VHP+L+LL SK+E PVCKI
Sbjct: 4 IRTSLVYLCPAEHIPPKIEVDLANLDIGDRVSMNDIPVHPSLRLL-SKNETMPVCKILAS 62
Query: 250 R 250
+
Sbjct: 63 K 63
>gi|124385169|ref|YP_001027484.1| 50S ribosomal protein L25 [Burkholderia mallei NCTC 10229]
gi|238561329|ref|ZP_00442185.2| 50S ribosomal protein L25 [Burkholderia mallei GB8 horse 4]
gi|254175111|ref|ZP_04881772.1| 50S ribosomal protein L25 [Burkholderia mallei ATCC 10399]
gi|254196454|ref|ZP_04902878.1| 50S ribosomal protein L25 [Burkholderia pseudomallei S13]
gi|254357505|ref|ZP_04973779.1| 50S ribosomal protein L25 [Burkholderia mallei 2002721280]
gi|386863010|ref|YP_006275959.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 1026b]
gi|418398031|ref|ZP_12971653.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 354a]
gi|418537678|ref|ZP_13103313.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 1026a]
gi|418544994|ref|ZP_13110263.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 1258a]
gi|418552056|ref|ZP_13116952.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 1258b]
gi|418558038|ref|ZP_13122612.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 354e]
gi|124293189|gb|ABN02458.1| 50S ribosomal protein L25 [Burkholderia mallei NCTC 10229]
gi|148026569|gb|EDK84654.1| 50S ribosomal protein L25 [Burkholderia mallei 2002721280]
gi|160696156|gb|EDP86126.1| 50S ribosomal protein L25 [Burkholderia mallei ATCC 10399]
gi|169653197|gb|EDS85890.1| 50S ribosomal protein L25 [Burkholderia pseudomallei S13]
gi|238524791|gb|EEP88222.1| 50S ribosomal protein L25 [Burkholderia mallei GB8 horse 4]
gi|385345756|gb|EIF52450.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 1258b]
gi|385347659|gb|EIF54310.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 1258a]
gi|385349594|gb|EIF56161.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 1026a]
gi|385363800|gb|EIF69558.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 354e]
gi|385367227|gb|EIF72786.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 354a]
gi|385660138|gb|AFI67561.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 1026b]
Length = 240
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R AG+ IV+ E ++I + N + L +
Sbjct: 39 VVAFERQQQGTGASRRLRNAGKTTGIVYGGE-----AAPQMIELDHNALWHA---LKKEA 90
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + RVL R V H L+V F R P+ L PL
Sbjct: 91 FHSSILDLEVAGK--------SQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLH 142
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
F + SP ++ ++ + ++ C PAD+ P +++VDLS+++ Q + A D+ +
Sbjct: 143 FLNAETSPAVKLSSAVVSHVVTEIEIECLPADL-PEFLEVDLSKIEAGQSLHAKDIALPN 201
Query: 232 ALKLLRSKD--EPV---CKIAGGRASDQKKS 257
+ L D PV I G SD+ +
Sbjct: 202 GVALTAHVDAENPVIASATIPAGAVSDEAAA 232
>gi|254262121|ref|ZP_04953175.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1710a]
gi|254220810|gb|EET10194.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1710a]
Length = 208
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R GT S + R AG+ IV+ GG ++I + N + L +
Sbjct: 7 VVAFERQQQGTGASRRLRNAGKTTGIVY-------GGEAAPQMIELDHNALWHA---LKK 56
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + DLEV + RVL R V H L+V F R P+ L P
Sbjct: 57 EAFHSSILDLEVAGK--------SQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAP 108
Query: 172 LVFRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
L F + SP ++ ++ + ++ C PAD+ P +++VDLS ++ Q + A D+ +
Sbjct: 109 LHFLNAETSPAVKLSSAVVSHVVTEIEIECLPADL-PEFLEVDLSXIEAGQSLHAKDIAL 167
Query: 230 HPALKLLRSKD--EPV---CKIAGGRASDQ 254
+ L D PV I G SD+
Sbjct: 168 PNGVALTAHVDAENPVIASATIPAGAVSDE 197
>gi|255034233|ref|YP_003084854.1| 50S ribosomal protein L25/general stress protein Ctc [Dyadobacter
fermentans DSM 18053]
gi|254946989|gb|ACT91689.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dyadobacter
fermentans DSM 18053]
Length = 188
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 95/194 (48%), Gaps = 24/194 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQI-RKLVGHLGRS 112
I+ RA+ G + R G VPS+++ GG++++ N + R+L+
Sbjct: 6 IVGFKRANLGKVEAQNLRAQGYVPSVLY-------GGDEQVHFYAPNMLFRELL------ 52
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F +F++ + E G+ + + ++ H DA ++ FL+ P +K++VP+
Sbjct: 53 -FTPDIFNVTLNIE-GT-----EYNAILQETQYHPVNDALIHADFLQIIPGKEIKVEVPI 105
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
G S G+ KGG +N R ++ A+ +P Y++VD++ELD+ + + G LK
Sbjct: 106 KLTG--TSTGVMKGGKMNQKLRKLRVQGLAENIPDYVNVDVTELDLGKSVKVGALKAENF 163
Query: 233 LKLLRSKDEPVCKI 246
+ +L + P+ +
Sbjct: 164 V-ILTATSNPIASV 176
>gi|284159402|ref|YP_441031.3| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
thailandensis E264]
gi|83654462|gb|ABC38525.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
thailandensis E264]
Length = 223
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R AG+ IV+ E ++I + N + L +
Sbjct: 22 VVAFERQQQGTGASRRLRNAGKTTGIVYGGE-----AAPQMIELDHNALWHA---LKKEA 73
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + RVL R V H L+V F R P+ L VPL
Sbjct: 74 FHSSILDLEVAGK--------SQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKVPLH 125
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
F + SP ++ ++ + ++ C PAD+ P +++VDLS+++ Q + A D+
Sbjct: 126 FLNAESSPAVKLSSAVVSHVVTEIEVECLPADL-PEFLEVDLSKIEAGQSLHAKDI 180
>gi|222149335|ref|YP_002550292.1| 50S ribosomal protein L25 [Agrobacterium vitis S4]
gi|221736319|gb|ACM37282.1| 50S ribosomal protein L25 [Agrobacterium vitis S4]
Length = 200
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 23/151 (15%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRL---ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
R+ G +P++++ G+K+ I++ TN++ K + H G F++ + +EV E
Sbjct: 25 RRNGLIPAVIY--------GDKQAPIAITLNTNEVTKRI-HAGG--FMTTVATIEVNGE- 72
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
K+RVLP+ L D +++ FLR + + + VP+ F +D S ++ G
Sbjct: 73 -------KIRVLPKDYQLDPVRDFTMHIDFLRVSANSQVTVAVPVRFVNEDKS-AVKTGA 124
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDV 218
LN ++ V+ PA+ +P I DL L +
Sbjct: 125 VLNIVRHDVELQVPANNIPEAITFDLEGLKI 155
>gi|390568417|ref|ZP_10248723.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
terrae BS001]
gi|420253485|ref|ZP_14756536.1| ribosomal protein L25, Ctc-form [Burkholderia sp. BT03]
gi|389939583|gb|EIN01406.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
terrae BS001]
gi|398052056|gb|EJL44353.1| ribosomal protein L25, Ctc-form [Burkholderia sp. BT03]
Length = 203
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R +G+ P IV+ G +LI + N L L +
Sbjct: 3 VVAFERNLQGTGASRRLRNSGKTPGIVYG------AGEPQLIELDHN---ALFHALKKEA 53
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + DLEV + +VL R V H L+V F R L VPL
Sbjct: 54 FHASILDLEVAGK--------SQQVLLRDVQYHPFRQIILHVDFQRVDASKKLHTKVPLH 105
Query: 174 FRGDDVSPGLRKGG-YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
F + +P ++ GG ++ + ++ C +P +I+VDL +++ Q + A D+
Sbjct: 106 FMNQESNPAVKTGGAIISHVINEIEIECLPAALPEFIEVDLVKIEAGQSLHATDI 160
>gi|89900451|ref|YP_522922.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Rhodoferax
ferrireducens T118]
gi|109893386|sp|Q21XW2.1|RL25_RHOFD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|89345188|gb|ABD69391.1| LSU ribosomal protein L25P [Rhodoferax ferrireducens T118]
Length = 223
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 17/164 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
+A RA GT S + R GR P IV+ G + I + N + L +
Sbjct: 3 FVAFERAKQGTGASRRLRITGRTPGIVYGG-----GAEPQQIEIDHNALWHA---LKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + D+E+ + +VL R V +H L+V F R L + VPL
Sbjct: 55 FHAAVLDMELDGKDN--------KVLLRDVQMHPFKQLILHVDFQRVDASTRLHMKVPLH 106
Query: 174 FRGDDVSPGLRKGGYL-NTIKRTVKFLCPADIVPPYIDVDLSEL 216
+ GD+ SP ++ G + N + ++ LC +P +I VDLS L
Sbjct: 107 YSGDENSPAVKTEGCIANHVITEIEVLCLPTDLPEFIAVDLSGL 150
>gi|93005015|ref|YP_579452.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter
cryohalolentis K5]
gi|109893383|sp|Q1QED5.1|RL25_PSYCK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|92392693|gb|ABE73968.1| LSU ribosomal protein L25P [Psychrobacter cryohalolentis K5]
Length = 224
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 16/156 (10%)
Query: 63 GTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLE 122
G S + RK VP+I++ GG ++ ++ +I +LV L F S + L
Sbjct: 19 GKGASRRLRKQNLVPAIIY-------GGGEQPTAISI-KINELVKSLEFEAFFSHILTLN 70
Query: 123 VRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPG 182
V E + +V+ + + H P++ F R + ++VP+ F G + +PG
Sbjct: 71 VDGE--------EHQVVIKDLQRHPAKGFPMHADFQRVVKGQKINMNVPVHFSGREEAPG 122
Query: 183 LRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDV 218
+ GG L+T+ ++ +C +P Y+++D+S +++
Sbjct: 123 TKAGGVLSTLVTDIEIVCIPSQLPEYLEIDVSGMEI 158
>gi|404254170|ref|ZP_10958138.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. PAMC 26621]
Length = 231
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 17/178 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G S R+ GRVP++++ G + +S+ + + L+ L
Sbjct: 6 TLAAETREQVGKGASRLLRREGRVPAVIY-------GNKQEPLSIHVEE-KALMRLLNTG 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F++ + L+ + +VR LP+ V T+ P++V FLR + + + VP+
Sbjct: 58 HFMNSVVMLDAGGQ--------QVRTLPKDVTFDVVTERPVHVDFLRIGAHSTVTVAVPV 109
Query: 173 VFRGDDVSPGLRK-GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
VF +D +PG++K GG LN + ++ +C A +P I + L+ L+V I D+K+
Sbjct: 110 VFVDEDDAPGIKKDGGVLNVTRHEIEVVCDAAEIPGEISISLAGLEVGASIHISDVKL 167
>gi|359405026|ref|ZP_09197825.1| ribosomal protein L25, Ctc-form [Prevotella stercorea DSM 18206]
gi|357559718|gb|EHJ41153.1| ribosomal protein L25, Ctc-form [Prevotella stercorea DSM 18206]
Length = 197
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVF--EQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVS 116
R G + S RK G VP ++ ++DG+ +V ++RK++ + + ++
Sbjct: 11 RTDLGKKASKTLRKEGLVPCNLYGLAEQDGKPVA--MAFAVPMTELRKII-YTPHIYVIN 67
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
+ D E R+ + +++ H TDA L+V FL + + I +P+ G
Sbjct: 68 LVIDGESRT------------AILKEIQFHPVTDAVLHVDFLEVNDQKPITIGIPVKLTG 115
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
++ G+R GG +N R ++ P +P ++D+D++ L + + I G L L+++
Sbjct: 116 --LAQGVRDGGRMNLSIRKIEVKAPYQQIPEHLDIDVTALQIGKSIKVGQLNFE-GLEIV 172
Query: 237 RSKDEPVCKIAGGR 250
K+ VC I R
Sbjct: 173 TGKEVIVCSIKMTR 186
>gi|258544625|ref|ZP_05704859.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Cardiobacterium hominis ATCC 15826]
gi|258520133|gb|EEV88992.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Cardiobacterium hominis ATCC 15826]
Length = 211
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 50 YDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHL 109
Y T+ AI R G S + R+ G VP+IV+ E G ++V+ + + K
Sbjct: 4 YAYTLSAIVRQDSGKGASRRLRREGLVPAIVYGGE-----GAALPVAVKQDDLVKF---- 54
Query: 110 GR-SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
GR F S++ L+V G GD V V+ R V H ++ F R L+
Sbjct: 55 GRFDSFYSQIICLKVE---GQGD----VEVIVRDVQRHLYKPLYQHMDFQRVVRGQELQA 107
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
V L F +D S G++ GG + + + +C +P YI+VD++ + + I DLK
Sbjct: 108 TVSLHFTNEDTSVGVKAGGIVEHHLNSAEIVCLPRNLPEYIEVDMANVALGDVIHLRDLK 167
Query: 229 VHPALKLLRSKDEPVCKIA 247
+ ++LL D +A
Sbjct: 168 LPQGVRLLHDDDRAEAVVA 186
>gi|427736084|ref|YP_007055628.1| 50S ribosomal protein L25 [Rivularia sp. PCC 7116]
gi|427371125|gb|AFY55081.1| LSU ribosomal protein L25P [Rivularia sp. PCC 7116]
Length = 205
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R++G +P+ ++ G G + V+T + +L L ++ + L DL+V
Sbjct: 20 RRSGEIPANLY----GHQGTESISLVVETKTVERL---LRKASVNNTLIDLKV------A 66
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK-GGYL 189
D+ + + L R+V H T P +++F + ++VP + GD V G+++ GG L
Sbjct: 67 DIPWEGQTLLREVQAHPATGKPYHLSFFAVAGHGKMTVEVPFNYVGDSV--GVKQEGGIL 124
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
+T+ ++ C + +P ID+D+S L V + + + + L +E V +
Sbjct: 125 DTVITQMQLNCLPENIPDSIDIDVSNLHVGDSLHVNQIVLPKGVTLTAESEELVVSV 181
>gi|56476200|ref|YP_157789.1| 50S ribosomal protein L25 [Aromatoleum aromaticum EbN1]
gi|68053040|sp|Q5P723.1|RL25_AZOSE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|56312243|emb|CAI06888.1| 50S Ribosomal protein L25 [Aromatoleum aromaticum EbN1]
Length = 201
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R GT S + R+AG++P I++ + + + I+V N++ L L + F
Sbjct: 7 ATQRVEQGTGASRRLRRAGQIPGIIYGADT-----DAQAITVDHNELYHL---LKKETFH 58
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + +E+ K V+ R V H L++ F R L + VPL F
Sbjct: 59 ASVLMIELEG--------AKHTVVLRDVQWHPYKQQVLHLDFQRIDAGHQLHLKVPLHFI 110
Query: 176 GDDVSPGLRKGGYLNTIKRT-VKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
+D +P ++ GG + + T + C PA++ P +I+VDL L+ Q I LK+
Sbjct: 111 NNDTNPAVKLGGCMISHTMTELDIACLPANL-PEFIEVDLQSLEAGQSIHVSQLKL 165
>gi|326318320|ref|YP_004235992.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323375156|gb|ADX47425.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax
avenae subsp. avenae ATCC 19860]
Length = 210
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLG 110
+A RA GT S + R +G+ P IV+ GG+ +LI V N L L
Sbjct: 2 NFVAFERAKQGTGASRRLRNSGKTPGIVY-------GGSAEPQLIEVDHN---ALWHALK 51
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
+ F S + D+E+ + +VL R V H L++ F R + L + V
Sbjct: 52 KEAFHSSVLDMELAGKTS--------KVLLRDVQYHPYKQLVLHIDFQRVDEKTKLHMKV 103
Query: 171 PLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
PL F G + SP ++ +N + + C +P +I+VDLS+L+ + + D+K+
Sbjct: 104 PLHFSGAEESPAVKIDKCMVNPVATELDVSCMPSDLPEFINVDLSKLEKGRSLHLKDIKL 163
>gi|336399576|ref|ZP_08580376.1| LSU ribosomal protein L25P [Prevotella multisaccharivorax DSM
17128]
gi|336069312|gb|EGN57946.1| LSU ribosomal protein L25P [Prevotella multisaccharivorax DSM
17128]
Length = 208
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 141 RKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLC 200
+++ H TDAPL+V F + + I +P+ G ++ G+R GG +N R +
Sbjct: 81 KEIQFHPVTDAPLHVDFYEVNDQKPITIGIPVKLNG--LAQGVRDGGRMNLSIRKINVTA 138
Query: 201 PADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRAS 252
P +P ++D+D++ L + + I G+L L++ SKD VC + R +
Sbjct: 139 PYQQIPEHLDIDVTGLRLGKSIKVGELSFE-GLEIATSKDVVVCSVKMTRNA 189
>gi|375107726|ref|ZP_09753987.1| ribosomal protein L25, Ctc-form [Burkholderiales bacterium
JOSHI_001]
gi|374668457|gb|EHR73242.1| ribosomal protein L25, Ctc-form [Burkholderiales bacterium
JOSHI_001]
Length = 228
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
+A R GT S + R G+VP IV+ GG I + N L L +
Sbjct: 3 FVAFERNQQGTGASRRLRSGGKVPGIVYG------GGKPANIELDHN---ALYFALKKEA 53
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S L ++E+ G ++KV L R +H L++ F R + VPL
Sbjct: 54 FHSSLLEMEL------GGAVQKV--LLRDFQMHPWKQQVLHIDFQRVDETTRIHKKVPLH 105
Query: 174 FRGDDVSPGLRKGGYL-NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F G++ S ++ L N + ++ C A +P ++ VDLS L Q + A DLK+
Sbjct: 106 FSGEENSVAVKTDKCLVNHVMTEIEIECLAMALPEFLAVDLSGLTKGQSLHASDLKLPEG 165
Query: 233 LKL 235
+K+
Sbjct: 166 VKI 168
>gi|402565435|ref|YP_006614780.1| 50S ribosomal protein L25 [Burkholderia cepacia GG4]
gi|402246632|gb|AFQ47086.1| 50S ribosomal protein L25 [Burkholderia cepacia GG4]
Length = 201
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R AG+ IV+ GG ++ + L L +
Sbjct: 3 VVAFERQEQGTGASRRLRNAGKTTGIVY-------GGEAAPQKIELDH-NALWHALKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + +VL R V H L+V F R + L PL
Sbjct: 55 FHSSILDLEVAGQ--------SQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
F +VSP ++ ++ + ++ C PAD+ P +++VDLS+L+ Q + A D+ +
Sbjct: 107 FLNAEVSPAVKLSSAIVSHVATEIEIECLPADL-PEFLEVDLSKLEAGQSLHAKDIALPK 165
Query: 232 ALKLLRSKD--EPV---CKIAGGRASD 253
+ L+ D PV I G SD
Sbjct: 166 GVALVAHVDAENPVVASATIPAGAVSD 192
>gi|126439855|ref|YP_001057621.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 668]
gi|166223668|sp|A3N5K0.1|RL25_BURP6 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|126219348|gb|ABN82854.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 668]
Length = 204
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGN--KRLISVQTNQIRKLVGHLGR 111
++A R GT S + R AG+ IV+ GG ++I + N + L +
Sbjct: 3 VVAFERQQQGTGASRRLRNAGKTTGIVY-------GGEVAPQMIELDHNALWHA---LKK 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + DLEV + RVL R V H L+V F R P+ L P
Sbjct: 53 EAFHSSILDLEVAGK--------SQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAP 104
Query: 172 LVFRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
L F + SP ++ ++ + ++ C PAD+ P +++VDLS+++ Q + A D+ +
Sbjct: 105 LHFLNAETSPAVKLSSAVVSHVVTEIEIECLPADL-PEFLEVDLSKIEAGQSLHAKDIAL 163
Query: 230 HPALKLLRSKD--EPV---CKIAGGRASDQKKS 257
+ L D PV I G SD+ +
Sbjct: 164 PNGVALTAHVDAENPVIASATIPAGAVSDEAAA 196
>gi|307566372|ref|ZP_07628811.1| 50S ribosomal protein L25 [Prevotella amnii CRIS 21A-A]
gi|307344949|gb|EFN90347.1| 50S ribosomal protein L25 [Prevotella amnii CRIS 21A-A]
Length = 196
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 24/198 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQ----TNQIRKLVGHLGRSFF 114
R G + S RK G VP ++ G+ N ++V +++RKLV +
Sbjct: 11 RNDLGKKASRLMRKEGLVPCNLY----GEKKENGLPVAVSFSSPMSELRKLV-------Y 59
Query: 115 VSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVF 174
++ +E+ + EK + + + H TDA L+V F E + + VP+
Sbjct: 60 TPNIYGVELTIDG------EKHLAVMKDLQFHPTTDALLHVDFYEVTEEKPIVMGVPVKL 113
Query: 175 RGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
G ++ G+R GG LN R + P + +P +++D++ L + + I GDL L+
Sbjct: 114 SG--LAQGVRDGGRLNMSIRKINVKAPFNKMPETLNIDVTNLQLGKAIKVGDLSFE-GLE 170
Query: 235 LLRSKDEPVCKIAGGRAS 252
L+ SK+ VC I R S
Sbjct: 171 LVTSKEVVVCSIKATRNS 188
>gi|427399529|ref|ZP_18890767.1| ribosomal protein L25, Ctc-form [Massilia timonae CCUG 45783]
gi|425721291|gb|EKU84204.1| ribosomal protein L25, Ctc-form [Massilia timonae CCUG 45783]
Length = 195
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 21/177 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGR 111
++A R GT S + R AG+ P I++ GG + LI++ N L L +
Sbjct: 3 VVAFNRTQQGTGASRRLRNAGQTPGIIY-------GGTEAPALIALDGN---ALYHALKK 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F + DLE+ + +VL R +H+ L+ F R + V
Sbjct: 53 EAFHGSVLDLEIDGK--------TQQVLLRDFQMHAYKQLVLHADFQRVDTSKPIHTKVT 104
Query: 172 LVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
L F ++SP ++ G ++ + V+ C +P +I+VDLS+L+ Q I GDL
Sbjct: 105 LHFVNAEISPAVKLSGAIVSHVLNEVEVSCLPGQLPEFIEVDLSKLEAGQSIHTGDL 161
>gi|115352914|ref|YP_774753.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
ambifaria AMMD]
gi|170701088|ref|ZP_02892064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
ambifaria IOP40-10]
gi|172061762|ref|YP_001809414.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
ambifaria MC40-6]
gi|122322183|sp|Q0BBQ4.1|RL25_BURCM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736288|sp|B1YN53.1|RL25_BURA4 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|115282902|gb|ABI88419.1| LSU ribosomal protein L25P [Burkholderia ambifaria AMMD]
gi|170133989|gb|EDT02341.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
ambifaria IOP40-10]
gi|171994279|gb|ACB65198.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
ambifaria MC40-6]
Length = 202
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 22/206 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R AG+ IV+ GG ++ + L L +
Sbjct: 3 VVAFERQEQGTGASRRLRNAGKTTGIVY-------GGEAAPQKIELDH-NALWHALKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + +VL R V H L+V F R + L VPL
Sbjct: 55 FHSSILDLEVAGQ--------SQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F +VSP ++ ++ + ++ C +P +++VDLS+++ Q + A D+ +
Sbjct: 107 FLNAEVSPAVKLSSAVVSHVATEIEIECLPSALPEFLEVDLSKIEAGQSLHAKDIALPKG 166
Query: 233 LKLLRSKD--EPV---CKIAGGRASD 253
+ L+ D PV I G SD
Sbjct: 167 VALVAHIDAENPVVASATIPAGAVSD 192
>gi|443319672|ref|ZP_21048850.1| ribosomal protein L25, Ctc-form [Gloeocapsa sp. PCC 73106]
gi|442790616|gb|ELS00172.1| ribosomal protein L25, Ctc-form [Gloeocapsa sp. PCC 73106]
Length = 185
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +PS+++ G +G + + ++++ L L ++ + + +L+V +G
Sbjct: 20 RRQGLIPSVLY----GHNGTESVPLVISSDKVTNL---LKKASVNNTIVELDVTDMPWNG 72
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
VL R+V H +V+F + L I VP+ G+ + G+++GG L
Sbjct: 73 P------VLIREVQSHPWKRNIYHVSFFSVATQGRLDITVPIRLIGE--AFGVKQGGVLE 124
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGR 250
+ +K C AD +P IDVD+++LD+ I +L + + ++ D+ V I +
Sbjct: 125 QLVTELKVQCLADKIPESIDVDMTDLDIGAVIHVHELNISEGVTVMDEPDKIVLTIVSAK 184
>gi|91781712|ref|YP_556918.1| 50S ribosomal protein L25 [Burkholderia xenovorans LB400]
gi|122970734|sp|Q145X3.1|RL25_BURXL RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91685666|gb|ABE28866.1| LSU ribosomal protein L25P [Burkholderia xenovorans LB400]
Length = 207
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R+ GT S + R +G+ P IV+ G +L+ + N + L +
Sbjct: 3 VVAFERSLQGTGASRRLRNSGKTPGIVYGA-----GAETQLVELDHNALWHA---LKKEV 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + +VL R V H L+V F R + L VPL
Sbjct: 55 FHSSILDLEVAGK--------SQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F + +P ++ ++ + ++ C +P +++VDL+ ++ + A D+K+
Sbjct: 107 FLNQETNPAVKLSSAVISHVINEIEIECLPSALPEFLEVDLATIEAGHSVHAKDIKL 163
>gi|400286564|ref|ZP_10788596.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter
sp. PAMC 21119]
Length = 229
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 63 GTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLE 122
G S + RK VP+I++ GGN+ S+ +I +LV L F S + +
Sbjct: 19 GKGASRRLRKQNLVPAIIY-------GGNEEPTSISI-KINELVKSLEFEAFFSHILTIN 70
Query: 123 VRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPG 182
V D +E V+ + + H P++ F R + ++VP+ F G + +PG
Sbjct: 71 V-------DGVEHQAVI-KDLQRHPAKGFPMHADFQRIVKGQKIHMNVPVHFTGREDAPG 122
Query: 183 LRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
G L+T+ ++ +C ++P Y++VD+S +++ D+K+
Sbjct: 123 TAAAGVLSTLVSDIEIICLPSLLPEYLEVDVSGMEIGDLFRLSDIKL 169
>gi|167585421|ref|ZP_02377809.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
ubonensis Bu]
Length = 201
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 23/178 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R GT S + R AG+ IV+ GG ++I + N + L +
Sbjct: 3 VVAFERQQQGTGASRRLRNAGKTTGIVY-------GGEAAPQMIELDHNALWHA---LKK 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + DLEV G+ +VL R V H L+V F R + L VP
Sbjct: 53 EAFHSSILDLEVA---GASQ-----QVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVP 104
Query: 172 LVFRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
L F +VSP ++ ++ + ++ C PAD+ P ++++DLS+++ Q + A D+
Sbjct: 105 LHFLNAEVSPAVKLSSAIISHVATEIEVECLPADL-PEFLEIDLSKIEAGQSLHAKDI 161
>gi|260427669|ref|ZP_05781648.1| ribosomal protein L25, Ctc-form [Citreicella sp. SE45]
gi|260422161|gb|EEX15412.1| ribosomal protein L25, Ctc-form [Citreicella sp. SE45]
Length = 206
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A+ R+ G + + R+ G VP I+F GG+ +++Q K++ L
Sbjct: 8 LVALERSGTGKGAARQARRDGMVPGILF-------GGDAEPLAIQM-PFNKMLHQLKAGR 59
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F LF+L+V + VRV+ R V D P + +R + + + +
Sbjct: 60 FKQTLFNLKVEGH-------DDVRVICRDVQRDVVKDLPTHFDLMRLRRTTRINLFIHVD 112
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
F ++ +PGL++GG L +++ V+ A +P +I VDL + I D+ + +
Sbjct: 113 FINEEKAPGLKRGGVLTIVRQEVELNVLAGDIPDHITVDLEGKQIGDVIHISDVTLPEGV 172
Query: 234 KLLRSKDEPVCKIAGGRA 251
K +D + I+ R
Sbjct: 173 KPTVDRDFVIANISAPRG 190
>gi|345304242|ref|YP_004826144.1| 50S ribosomal protein L25 [Rhodothermus marinus SG0.5JP17-172]
gi|345113475|gb|AEN74307.1| 50S ribosomal protein L25 [Rhodothermus marinus SG0.5JP17-172]
Length = 202
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 22/196 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI A PR + G R + R+ G VP I++ G H V+ + L L
Sbjct: 5 TIEAKPRET-GKRAARAIRREGWVPCILY----GHH--------VEPIPFQMLESKLRPL 51
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ + ++++ + D I K V H TD PL+ F E + + VP+
Sbjct: 52 IYTTETHLVKLQLNGKTWDCILK------DVEFHPVTDRPLHADFQVLRAEEKVTVTVPV 105
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
G V G+++GG L + R ++ C +P +ID+D+S LD+ I GDL+
Sbjct: 106 QIVGTAV--GVQRGGVLQIVTRELEVTCLPKDIPAHIDIDVSNLDIGDAIHVGDLQFE-G 162
Query: 233 LKLLRSKDEPVCKIAG 248
L+ + D+ V IA
Sbjct: 163 LEFEDAPDQTVVVIAA 178
>gi|395493845|ref|ZP_10425424.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. PAMC 26617]
Length = 230
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 17/178 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G S R+ GRVP++++ G + +S+ + + L+ L
Sbjct: 6 TLAAETREQVGKGASRLLRREGRVPAVIY-------GNKQEPLSIHVEE-KALMRLLNTG 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F++ + L+ + +VR LP+ V T+ P++V FLR + + + VP+
Sbjct: 58 HFMNSVVMLDAGGQ--------QVRTLPKDVTFDVVTERPVHVDFLRIGAHSTVTVAVPV 109
Query: 173 VFRGDDVSPGLRK-GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
VF +D +PG++K GG LN + ++ +C A +P I + L+ L+V I D+K+
Sbjct: 110 VFVDEDDAPGIKKDGGVLNVTRHEIEVVCDAAEIPGEITISLAGLEVGASIHISDVKL 167
>gi|406707811|ref|YP_006758163.1| 50S ribosomal protein L25 [alpha proteobacterium HIMB59]
gi|406653587|gb|AFS48986.1| LSU ribosomal protein L25P [alpha proteobacterium HIMB59]
Length = 213
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 72 KAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGD 131
K G +PSI++ GG+ + V ++I+ L F S++F++ D
Sbjct: 22 KDGLIPSIIY-------GGSADPLMVAVDRIQ-LKKRFEEGGFYSKIFEV---------D 64
Query: 132 LIEKVR-VLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
L EK V+ + + H + P++V F R + + I VP+ F + SPGL++GG LN
Sbjct: 65 LGEKKEPVVVKSIQRHKVKNHPIHVDFQRVDDKTRIVISVPIEFVDQETSPGLKQGGVLN 124
Query: 191 TIKRTVKFLCPADIVPPYIDVDLS 214
++R ++ C A+ +P + L
Sbjct: 125 VVRREIELSCLANNIPEKFVISLE 148
>gi|171320165|ref|ZP_02909227.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
ambifaria MEX-5]
gi|171094579|gb|EDT39631.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
ambifaria MEX-5]
Length = 202
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 22/206 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R AG+ IV+ GG ++ + L L +
Sbjct: 3 VVAFERQEQGTGASRRLRNAGKTTGIVY-------GGEAAPQKIELDH-NALWHALKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + +VL R V H L+V F R + L VPL
Sbjct: 55 FHSSILDLEVAGQ--------SQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F +VSP ++ ++ + ++ C +P +++VDLS+++ Q + A D+ +
Sbjct: 107 FLNAEVSPAVKLSSAIVSHVATEIEVECLPSALPEFLEVDLSKIEAGQSLHAKDIALPKG 166
Query: 233 LKLLRSKD--EPV---CKIAGGRASD 253
+ L+ D PV I G SD
Sbjct: 167 VALVAHIDAENPVVASATIPAGAVSD 192
>gi|114331139|ref|YP_747361.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosomonas
eutropha C91]
gi|122313984|sp|Q0AGY6.1|RL25_NITEC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|114308153|gb|ABI59396.1| LSU ribosomal protein L25P [Nitrosomonas eutropha C91]
Length = 202
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R GT + + R GR+P +++ GG + I + + L L
Sbjct: 5 ISANSRNLHGTGANRRLRIQGRLPGVIYGG-----GGTAQPIDLDH---KDLYYKLKTDV 56
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + + V + K +VL R V +H L++ F R + + + VPL
Sbjct: 57 FHASILSINVDGK--------KEQVLLRDVQMHPFKQQVLHIDFQRIRQDQKIHVKVPLH 108
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F D++PG++ GG ++ + ++ C +P I VDLSE+ + DLK+
Sbjct: 109 FINADIAPGVKLSGGMISHVATEIEISCLPKDLPESITVDLSEMTAGSILHTSDLKLPEN 168
Query: 233 LK---LLRSKDEPVCKIA---GGRASDQ 254
++ LLR ++PV + GG +D+
Sbjct: 169 VEIPALLRGDNQPVSTLIMPRGGEVADE 196
>gi|187922591|ref|YP_001894233.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
phytofirmans PsJN]
gi|226736292|sp|B2SXG4.1|RL25_BURPP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|187713785|gb|ACD15009.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
phytofirmans PsJN]
Length = 206
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R+ GT S + R +G+ P IV+ G +L+ + N + L +
Sbjct: 3 VVAFERSLQGTGASRRLRNSGKTPGIVYGA-----GAETQLVELDHNALWHA---LKKEV 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + +VL R V H L+V F R + L VPL
Sbjct: 55 FHSSILDLEVAGK--------SQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F + +P ++ ++ + ++ C +P +++VDL+ ++ + A D+K+
Sbjct: 107 FMNQESNPAVKLSSAVISHVINEIEIECLPSALPEFLEVDLATIEAGHSVHAKDIKL 163
>gi|351730209|ref|ZP_08947900.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
radicis N35]
Length = 210
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 21/168 (12%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLG 110
+A RA GT S + R +G+ P IV+ GG +LI V N + L
Sbjct: 2 NFVAFERAKQGTGASRRLRNSGKTPGIVY-------GGTTEPQLIEVDHNALWHA---LK 51
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
+ F S + D+EV +VL R V H L++ F R + L + V
Sbjct: 52 KEAFHSSVLDMEVAGT--------TAKVLLRDVQYHPYKQLVLHIDFQRVDEKTKLHMKV 103
Query: 171 PLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELD 217
PL F G + SP ++ +N I + C +P +I VDLS L+
Sbjct: 104 PLHFSGAEESPAVKVDKCMVNPIVNELDVTCMPSDLPEFIAVDLSTLE 151
>gi|168830302|gb|ACA34399.1| RplY [uncultured bacterium pTW2]
Length = 226
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLG 110
+ I A R G S + R AG+VP+IV+ GG+ +S+Q R +
Sbjct: 3 EHKITATSRKDEGKGASRRLRHAGQVPAIVY-------GGHADPVSIQLEHERTWLVSQS 55
Query: 111 RSFFVSRLFDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
F+ S + DLE+ +SE +VL R + H +++ F R +++
Sbjct: 56 EWFYAS-ILDLEIDGKSE----------KVLLRDMQRHPYKQRIMHMDFQRVSANEAIRV 104
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRT-VKFLC-PADIVPPYIDVDLSEL 216
VPL F D SP + G + + T ++ C P D+ P +ID+DLS L
Sbjct: 105 SVPLHFLNVDKSPAGKTAGVVVMHELTQIEVSCLPGDL-PEFIDIDLSNL 153
>gi|169830288|ref|YP_001716270.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Desulforudis audaxviator MP104C]
gi|226736307|sp|B1I196.1|RL25_DESAP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|169637132|gb|ACA58638.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus
Desulforudis audaxviator MP104C]
Length = 211
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A PRA G + ++ G +P++++ +E G L+ V+T ++ ++ GR+
Sbjct: 8 ARPRAGRGKGYRNRLKQNGLIPAVIYGKEVGS-----LLLEVETRAVQDILTKTGRNA-- 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
L L V E G +K + + VH+H + +V F + + L V L
Sbjct: 61 --LIQLRVEPEKGRA---KKYDAIIKDVHMHPYKNEFFHVDFHQISLKDELTTSVNLKLT 115
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G +PG+ GG L + R V+ C +P +I+VD+S L + I DLK +K
Sbjct: 116 GS--APGVTAGGRLEQLIRQVEVSCLPRNIPDHIEVDVSGLGIGDAIHVSDLKAPEGVKF 173
Query: 236 LRSKDEPVCKIAGGRASDQK 255
D V + ++K
Sbjct: 174 ETDGDVTVVTLIAPHREEEK 193
>gi|294673023|ref|YP_003573639.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Prevotella
ruminicola 23]
gi|294474355|gb|ADE83744.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Prevotella
ruminicola 23]
Length = 198
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSR 117
RA+ G + S + RK G VP ++ + G++G L ++ +Q+R++V + + V+
Sbjct: 11 RATTGKKASKEMRKEGLVPCNMYGEAKGENGLPVSLSFAIPASQLRRVV-YSPDVYVVNL 69
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
D E + + +++ H TDA L+V F E + I +P+ G
Sbjct: 70 TIDGEAH------------KAVMKELQFHPTTDALLHVDFYEVNEEKPITIGIPVKLVGH 117
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
+ G+R GG L+ RT+ P +P ++VD++EL + + I +L
Sbjct: 118 --AQGVRDGGRLSQAVRTLNVTAPYKQIPEVLNVDVTELKLGKAIKVAEL 165
>gi|384418018|ref|YP_005627378.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353460931|gb|AEQ95210.1| ribosomal protein L25, Ctc-form [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 211
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G S + R AG +P+IV+ GG +S+Q N + + F+ S +
Sbjct: 12 RADEGKGASRRLRHAGVIPAIVY-------GGELEPVSIQLNHEQIWLAQQNEWFY-SSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
DL + +GD+ +VL R + H +++ F R L VPL F +D
Sbjct: 64 LDLNL-----NGDV---QQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINED 115
Query: 179 VSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPA 232
SP + + T + V+ +C +P +I+VDL L+V I ++K+ P
Sbjct: 116 ASPAGKSSEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEIPE 175
Query: 233 LKLLRSKDEPVC 244
LKL + +D V
Sbjct: 176 LKLGKERDVAVV 187
>gi|94500015|ref|ZP_01306550.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bermanella
marisrubri]
gi|94427873|gb|EAT12848.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Oceanobacter
sp. RED65]
Length = 211
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G+ P+IV+ GG+K V T Q+++L F S + L V G
Sbjct: 24 REEGKTPAIVY-------GGDKEPQQV-TLQLKELKKAFEDETFFSHIIKLNV------G 69
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLR-KGGYL 189
E V V + V H + ++V FLR ++K +PL F +D G++ +GG +
Sbjct: 70 GTAETVIV--KDVQRHPYQNLVMHVDFLRVSKSTVIKQHIPLHFLNEDTCKGVKLQGGKI 127
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
++ +C A +P +I+VDL++++V + DLK+
Sbjct: 128 THNMTDIEVICEAGKLPEFIEVDLADVEVGTVLHLSDLKL 167
>gi|393759956|ref|ZP_10348768.1| 50S ribosomal protein L25/general stress protein Ctc [Alcaligenes
faecalis subsp. faecalis NCIB 8687]
gi|393161768|gb|EJC61830.1| 50S ribosomal protein L25/general stress protein Ctc [Alcaligenes
faecalis subsp. faecalis NCIB 8687]
Length = 198
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGRSF 113
A R GT S + R AGRVP+IV+ GG ++ +IS+ N+I +L +
Sbjct: 5 ATSRDVQGTSASRRLRHAGRVPAIVY-------GGEEQPVVISLDHNEIYH---NLRKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + +E+ + +VL R V H L+V F R + VPL
Sbjct: 55 FHASILTMELDGK--------AEKVLLRSVQWHPYKQQVLHVDFQRVLASQAITTKVPLN 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F G +VSP ++ G ++ I ++ C +P I VDLS + + +K+
Sbjct: 107 FEGGEVSPAVKLSGQVISHILTELEITCLPGNLPASITVDLSGMTANANLHLDSIKLPLG 166
Query: 233 LKLLRSKDEPVCKIA---GGRASDQKKSK 258
+ + P+ A GG A+ ++ +
Sbjct: 167 VTYAGNDTNPLLAAALPVGGAAASEETEE 195
>gi|381158261|ref|ZP_09867494.1| ribosomal protein L25, Ctc-form [Thiorhodovibrio sp. 970]
gi|380879619|gb|EIC21710.1| ribosomal protein L25, Ctc-form [Thiorhodovibrio sp. 970]
Length = 204
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R G S + R+ G+VP I++ G RL + ++V + +
Sbjct: 7 ISAQARTDVGKGASRRLRRTGQVPGILY--------GGDRLPEMFMLPHSEIVKYAAQES 58
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S L D ++ K +V+ + + H L+V F R L++ VPL
Sbjct: 59 FYSTLLDFDLAGA--------KTQVVLKDLQRHPAKPFILHVDFQRVSKGEKLRMTVPLH 110
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F +D+ G++ GG + + C PAD+ P YI VD+ ++++ Q + DL +
Sbjct: 111 FENEDICAGIKLGGQASHNLTELDIQCLPADL-PEYIAVDIQKMELGQTLHVSDLVLPKG 169
Query: 233 LKLLRSKDE 241
++L S D+
Sbjct: 170 VELDTSVDQ 178
>gi|429741425|ref|ZP_19275085.1| ribosomal protein L25, Ctc-form [Porphyromonas catoniae F0037]
gi|429158725|gb|EKY01257.1| ribosomal protein L25, Ctc-form [Porphyromonas catoniae F0037]
Length = 192
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 36/219 (16%)
Query: 40 LDGLPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQT 99
L GLPRPD G + S R +P++++ D H +V
Sbjct: 6 LAGLPRPDL--------------GKKASKGLRAGDLIPAVLYGGNDVVH------FTVSQ 45
Query: 100 NQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLR 159
+R LV FV DL++ + KV+ + + + H TDA L++ FL
Sbjct: 46 EAVRNLV--YSPDIFV---IDLDIAGK--------KVKAVLKDLQFHPVTDAILHLDFLE 92
Query: 160 APPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVE 219
+ ++VP+V G + G++ GG L+ R +K P + +P + +D++EL +
Sbjct: 93 VEAGKPIVMEVPVVLTGH--AEGVKAGGKLSLEMRKLKVRAPYNEIPEQLFIDVTELGLG 150
Query: 220 QKILAGDLKVHPALKLLRSKDEPVCKIAGGRASDQKKSK 258
+ I G L L++ +K+ VC + RA+ +K
Sbjct: 151 KTIQVGALSFD-GLEITNAKNAVVCAVKLTRAARGAMAK 188
>gi|399991704|ref|YP_006571944.1| 50S ribosomal protein L25 [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
gi|400753343|ref|YP_006561711.1| 50S ribosomal protein L25 [Phaeobacter gallaeciensis 2.10]
gi|398652496|gb|AFO86466.1| 50S ribosomal protein L25 [Phaeobacter gallaeciensis 2.10]
gi|398656259|gb|AFO90225.1| 50S ribosomal protein L25 [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 209
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G + R+AG VP +VF GG+ +S+Q +L+ L F S L
Sbjct: 13 RTGSGKGAARAARRAGMVPGVVF-------GGDADPVSIQI-PFNELLKKLKAGRFKSTL 64
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
++L+V + E VRV+ R V D P + +R + + + VP+ F ++
Sbjct: 65 WNLKVEGQ-------EDVRVICRDVQRDVVKDLPTHFDLMRLRRTSKVNLFVPVEFINEE 117
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
+PG+++GG L ++ V+ + A +P + VDL+ L+V + +K+ K
Sbjct: 118 EAPGIKRGGVLTAVRPEVELVVTAGDIPEKLVVDLAGLNVGDTVTISAIKLPEGAKPTID 177
Query: 239 KDEPVCKIA 247
+D V I+
Sbjct: 178 RDFVVANIS 186
>gi|416938560|ref|ZP_11934294.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
sp. TJI49]
gi|325524744|gb|EGD02726.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
sp. TJI49]
Length = 201
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 21/177 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R GT S + R AG+ IV+ GG ++I + N + L +
Sbjct: 3 VVAFERQQQGTGASRRLRNAGKTTGIVY-------GGEAAPQMIELDHNALWHA---LKK 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + DLEV + +VL R V H L+V F R + L VP
Sbjct: 53 EAFHSSILDLEVAGQ--------SQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVP 104
Query: 172 LVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
L F ++SP ++ ++ + ++ C +P +++VDLS+++ Q + A D+
Sbjct: 105 LHFLNAEISPAVKLSSAIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSLHAKDI 161
>gi|254247176|ref|ZP_04940497.1| 50S ribosomal protein L25 [Burkholderia cenocepacia PC184]
gi|124871952|gb|EAY63668.1| 50S ribosomal protein L25 [Burkholderia cenocepacia PC184]
Length = 205
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 19/189 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R AG+ IV+ GG ++ + L L +
Sbjct: 7 VVAFERQQQGTGASRRLRNAGKTTGIVY-------GGEAAPQKIELDH-NALWHALKKEA 58
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + +VL R V H L+V F R + L PL
Sbjct: 59 FHSSILDLEVAGQ--------SQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLH 110
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
F +VSP ++ ++ + ++ C PAD+ P +++VDLS+++ Q + A D+ +
Sbjct: 111 FLNAEVSPAVKLSSAIVSHVATEIEIECLPADL-PEFLEVDLSKIEAGQSLHAKDIALPK 169
Query: 232 ALKLLRSKD 240
+ L+ D
Sbjct: 170 GVALVAHVD 178
>gi|302345747|ref|YP_003814100.1| ribosomal protein L25, Ctc-form [Prevotella melaninogenica ATCC
25845]
gi|302149597|gb|ADK95859.1| ribosomal protein L25, Ctc-form [Prevotella melaninogenica ATCC
25845]
Length = 201
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 20/196 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVF--EQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVS 116
R G + S + RK G +P ++ Q+DG+ + +++RKLV + + V
Sbjct: 11 RTDLGKKASKQLRKEGLIPCNLYGEAQQDGKPVAFS--FTAPMSELRKLV-YTPHIYVVE 67
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
+ D E R+ + +++ H TDA L+V F + + + VP+ G
Sbjct: 68 LIIDGERRT------------AVLKELQFHPVTDALLHVDFYEVNDQKPIVMGVPVKLVG 115
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
++ G+R GG +N R + P +P ++D++++EL + + I G+L L+L+
Sbjct: 116 --LAQGVRDGGRMNMSIRKINVKAPYQQIPEHLDINVTELRLGKSIKVGELSFE-GLELV 172
Query: 237 RSKDEPVCKIAGGRAS 252
K+ VC I R S
Sbjct: 173 TPKEVVVCSIKATRNS 188
>gi|126739655|ref|ZP_01755347.1| ribosomal protein L25 [Roseobacter sp. SK209-2-6]
gi|126719301|gb|EBA16011.1| ribosomal protein L25 [Roseobacter sp. SK209-2-6]
Length = 209
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A RA G + R+AG VP +V+ GG+ ++Q +L+ L
Sbjct: 8 LVAQARAGTGKGAARAARRAGMVPGVVY-------GGDVEPQAIQI-PFNELLKKLKAGQ 59
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S L++L+V + E VRV+ R V D P ++ +R + + + +P+
Sbjct: 60 FKSTLWNLKVEGQ-------EDVRVICRDVQRDVVKDLPTHLDLMRLRRTSKINLFIPVE 112
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
F +D PG++KGG L ++ V+ + A +P I VDL++ + I + +
Sbjct: 113 FLNEDTCPGIKKGGMLTVVRPEVELVVTAGDIPEKIVVDLADKAIGDVITISSIDLPGGS 172
Query: 234 KLLRSKDEPVCKIA--GGRAS 252
K +D V IA GG +S
Sbjct: 173 KPTIDRDFVVANIAAPGGLSS 193
>gi|451822816|ref|YP_007459090.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451775616|gb|AGF46657.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 203
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ GT S + R G +P++V+ GGN ++++ + ++ L + F
Sbjct: 5 ATLRSVHGTSASRRLRHNGCIPAVVY-------GGNIAPLNIELDH-NEIYHALRKEEFH 56
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S + ++ + SG + +V+ R V H L+V F R + +PL F
Sbjct: 57 SSVLEM-----YMSGTN-KTEQVILRSVQWHPYKQQVLHVDFQRVSANQNINTKIPLHFL 110
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+D+SP ++ +G ++ I ++ C ++P +ID+DLS++++ + I D+ +
Sbjct: 111 NEDISPAVKLEGAIVSHIITELEISCLPSMLPQFIDIDLSKIELGKSIHLSDITL 165
>gi|30249779|ref|NP_841849.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosomonas
europaea ATCC 19718]
gi|71153155|sp|Q82TQ5.1|RL25_NITEU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|30180816|emb|CAD85736.1| Ribosomal protein L25 [Nitrosomonas europaea ATCC 19718]
Length = 198
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R GT + + R GR+P +++ GGN S++ + + L L
Sbjct: 5 ISANSRKLHGTGANRRLRSQGRLPGVIY-------GGNGDAQSIELDH-KDLYYKLKMEA 56
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + + + + K +VL R V +H L++ F R + + + VPL
Sbjct: 57 FHASILSISIDGK--------KEQVLLRDVQMHPFKQQVLHIDFQRVRQDQKIHVKVPLH 108
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F D++PG++ GG ++ + ++ C +P +I VDLS + + DL +
Sbjct: 109 FINADIAPGVKLSGGMISHVATEIEISCLPKDLPEFITVDLSGMTAGSTLHLSDLILSEN 168
Query: 233 LK---LLRSKDEPVCKIAGGRASDQKKSK 258
++ LL+ + PV + R + S+
Sbjct: 169 VEIPALLKGDNLPVATLIAKRGEAGESSE 197
>gi|118594523|ref|ZP_01551870.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylophilales bacterium HTCC2181]
gi|118440301|gb|EAV46928.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylophilales bacterium HTCC2181]
Length = 230
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 85/189 (44%), Gaps = 17/189 (8%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R GT S + R AG+ P +++ GG+K S++ + ++L
Sbjct: 5 INANVRELKGTGASRRLRHAGKTPGVLY-------GGDKEATSLEIDS-KELFMQFRHEA 56
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + L + + K V+ R +H + +++ F R + + VP
Sbjct: 57 FHASILTLNLAGK--------KEAVILRDFQMHPVRNNIVHIDFQRINENEKISVKVPFH 108
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F ++ +PG++ +GG ++ I + C +P YI+VD+S L + I ++KV
Sbjct: 109 FINEETAPGVKLEGGLISHIMTEIDISCLPKDLPQYIEVDMSALSIGDSIHLSEVKVPEG 168
Query: 233 LKLLRSKDE 241
++L DE
Sbjct: 169 VELTTLSDE 177
>gi|449133579|ref|ZP_21769129.1| 50S ribosomal protein L25 [Rhodopirellula europaea 6C]
gi|448887744|gb|EMB18102.1| 50S ribosomal protein L25 [Rhodopirellula europaea 6C]
Length = 205
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 93/199 (46%), Gaps = 22/199 (11%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGR 111
+ I R S GT + + R+ G VP++++ HG ++V + Q++ L+ H +
Sbjct: 3 DVIQVTKRESTGTAATRRLRRDGHVPAVLY-----GHGEANEHLAVPSAQVKGLLRHHSK 57
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
+ +S D L+ ++ P + + L++ +R + +++ VP
Sbjct: 58 TVQLSGDVD--------ETALVSDMQWDPLGIEV-------LHMDLIRVNLKEKVELGVP 102
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
+V G+ V G+R+GG L V+ C A +P ++ +++SEL V + AGDL +
Sbjct: 103 IVLHGEAV--GVREGGMLLENVHEVEIRCSAGSIPDHLILEVSELGVGEHKTAGDLTLPE 160
Query: 232 ALKLLRSKDEPVCKIAGGR 250
++L+ D + I R
Sbjct: 161 GVELITDGDVVITHIEARR 179
>gi|288803707|ref|ZP_06409136.1| ribosomal protein L25, Ctc-form [Prevotella melaninogenica D18]
gi|288333796|gb|EFC72242.1| ribosomal protein L25, Ctc-form [Prevotella melaninogenica D18]
Length = 201
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 20/196 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVF--EQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVS 116
R G + S + RK G +P ++ Q+DG+ + +++RKLV + + V
Sbjct: 11 RTDLGKKASKQLRKEGLIPCNLYGEAQQDGKPVAFS--FTAPMSELRKLV-YTPHIYVVE 67
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
+ D E R+ + +++ H TDA L+V F + + + VP+ G
Sbjct: 68 LIIDGERRT------------AVLKELQFHPVTDALLHVDFYEVNDQKPIVMGVPVKLVG 115
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
++ G+R GG +N R + P +P ++D++++EL + + I G+L L+L+
Sbjct: 116 --LAQGVRDGGRMNMSIRKINVKAPYQQIPEHLDINVTELRLGKSIKVGELSFE-GLELV 172
Query: 237 RSKDEPVCKIAGGRAS 252
K+ VC I R S
Sbjct: 173 TPKEVVVCSIKATRNS 188
>gi|206559196|ref|YP_002229956.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
cenocepacia J2315]
gi|198035233|emb|CAR51107.1| ribosomal L25p family protein [Burkholderia cenocepacia J2315]
Length = 205
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 17/188 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R AG+ IV+ GG ++ + L L +
Sbjct: 7 VVAFERQQQGTGASRRLRNAGKTTGIVY-------GGEAAPQKIELDH-NALWHALKKEA 58
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + +VL R V H L+V F R + L VPL
Sbjct: 59 FHSSILDLEVAGQ--------SQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLH 110
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F +VSP ++ ++ + ++ C +P +++VDLS+++ Q + A D+ +
Sbjct: 111 FLNAEVSPAVKLSSAIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSLHAKDIALPKG 170
Query: 233 LKLLRSKD 240
+ L+ D
Sbjct: 171 VTLVAHVD 178
>gi|395006685|ref|ZP_10390489.1| ribosomal protein L25, Ctc-form [Acidovorax sp. CF316]
gi|394315251|gb|EJE52062.1| ribosomal protein L25, Ctc-form [Acidovorax sp. CF316]
Length = 210
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 21/180 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLG 110
+A RA GT S + R +G+ P IV+ GG +LI + N + L
Sbjct: 2 NFVAFERAKQGTGASRRLRNSGKTPGIVY-------GGTAEPQLIEIDHNALWHA---LK 51
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
+ F S + D+EV GS +VL R V H L++ F R + L + V
Sbjct: 52 KEAFHSSVLDMEVA---GSTS-----KVLLRDVQYHPYKQLVLHIDFQRVDAKTKLHMKV 103
Query: 171 PLVFRGDDVSPGLRKGGYL-NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
PL F G + SP ++ L N + + C +P +I VDLS+L + D+K+
Sbjct: 104 PLHFSGAEESPAVKVDHCLVNPVVNELDVSCMPSDLPEFIAVDLSKLQKGSSLHLKDIKL 163
>gi|107023736|ref|YP_622063.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
cenocepacia AU 1054]
gi|116690823|ref|YP_836446.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
cenocepacia HI2424]
gi|170734148|ref|YP_001766095.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
cenocepacia MC0-3]
gi|123244641|sp|Q1BTG5.1|RL25_BURCA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166223665|sp|A0KAM6.1|RL25_BURCH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736289|sp|B1JYQ0.1|RL25_BURCC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|105893925|gb|ABF77090.1| LSU ribosomal protein L25P [Burkholderia cenocepacia AU 1054]
gi|116648912|gb|ABK09553.1| LSU ribosomal protein L25P [Burkholderia cenocepacia HI2424]
gi|169817390|gb|ACA91973.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
cenocepacia MC0-3]
Length = 201
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 19/189 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R AG+ IV+ GG ++ + L L +
Sbjct: 3 VVAFERQQQGTGASRRLRNAGKTTGIVY-------GGEAAPQKIELDH-NALWHALKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + +VL R V H L+V F R + L PL
Sbjct: 55 FHSSILDLEVAGQ--------SQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
F +VSP ++ ++ + ++ C PAD+ P +++VDLS+++ Q + A D+ +
Sbjct: 107 FLNAEVSPAVKLSSAIVSHVATEIEIECLPADL-PEFLEVDLSKIEAGQSLHAKDIALPK 165
Query: 232 ALKLLRSKD 240
+ L+ D
Sbjct: 166 GVALVAHVD 174
>gi|374621845|ref|ZP_09694374.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Ectothiorhodospira sp. PHS-1]
gi|373940975|gb|EHQ51520.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Ectothiorhodospira sp. PHS-1]
Length = 209
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 21/166 (12%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A PRA G S + R+AG++P+IV+ GG+K +++ + + L F
Sbjct: 9 AEPRADQGKGASRRLRRAGKLPAIVY-------GGDKEPVAITLDHNTVWLS-LAHEAFY 60
Query: 116 SRLFDLEV--RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
S + L+V +SE RV+ R + H L++ R + +K+ VPL
Sbjct: 61 SHILTLKVDGKSE----------RVILRDLQRHPVKQMVLHMDLQRVTDDQAIKVHVPLH 110
Query: 174 FRGDDVSPGLRK-GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDV 218
F +D+ G++ GG ++ V+ C +P +I+VD++ L+V
Sbjct: 111 FINEDICVGVKTGGGMISHQAMEVEVECLPKDLPEFIEVDVAALNV 156
>gi|297539288|ref|YP_003675057.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylotenera
versatilis 301]
gi|297258635|gb|ADI30480.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylotenera
versatilis 301]
Length = 202
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 22/202 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A+ R GT S + R+AG VP +V+ G K ++++ N + +F
Sbjct: 5 INAVKRDVKGTGASRRLRRAGTVPGVVY-------GAGKEAVTLEINAKELFLEFRHEAF 57
Query: 114 FVSRL-FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
S L +L+ + E VL R +H + ++ F R + + VP
Sbjct: 58 HASVLSLNLDGKKE----------NVLLRDFQMHPVRNTIQHIDFQRVSATEKIHVKVPF 107
Query: 173 VFRGDDVSPGLRK-GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
F D++PG++ GG + I C A +P +++VDL+ L++ I +K+
Sbjct: 108 HFINADIAPGVKTGGGIVAHILTEADVSCLAKDLPEFLEVDLAGLEMGHSIHLSQIKLAK 167
Query: 232 A---LKLLRSKDEPVCKIAGGR 250
++L D V IA R
Sbjct: 168 GVEFVQLAHGNDAAVAAIAKTR 189
>gi|421870811|ref|ZP_16302440.1| LSU ribosomal protein L25p [Burkholderia cenocepacia H111]
gi|444358310|ref|ZP_21159745.1| ribosomal protein L25, Ctc-form [Burkholderia cenocepacia BC7]
gi|444369703|ref|ZP_21169426.1| ribosomal protein L25, Ctc-form [Burkholderia cenocepacia
K56-2Valvano]
gi|358069140|emb|CCE53318.1| LSU ribosomal protein L25p [Burkholderia cenocepacia H111]
gi|443598720|gb|ELT67050.1| ribosomal protein L25, Ctc-form [Burkholderia cenocepacia
K56-2Valvano]
gi|443604327|gb|ELT72269.1| ribosomal protein L25, Ctc-form [Burkholderia cenocepacia BC7]
Length = 201
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 17/188 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R AG+ IV+ GG ++ + L L +
Sbjct: 3 VVAFERQQQGTGASRRLRNAGKTTGIVY-------GGEAAPQKIELDH-NALWHALKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + +VL R V H L+V F R + L VPL
Sbjct: 55 FHSSILDLEVAGQ--------SQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F +VSP ++ ++ + ++ C +P +++VDLS+++ Q + A D+ +
Sbjct: 107 FLNAEVSPAVKLSSAIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSLHAKDIALPKG 166
Query: 233 LKLLRSKD 240
+ L+ D
Sbjct: 167 VTLVAHVD 174
>gi|119505828|ref|ZP_01627894.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma
proteobacterium HTCC2080]
gi|119458326|gb|EAW39435.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma
proteobacterium HTCC2080]
Length = 216
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 21/160 (13%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRK-LVGHLGRSFFVSRLFDLEVRSEFGS 129
R G+VP +V+ GG IS+ IRK L + + F + + ++ V +
Sbjct: 25 RLEGKVPGVVY-------GGEAAAISISL--IRKDLEKMMEQETFYASVLNVNVDGSVET 75
Query: 130 GDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYL 189
L + V H P++V FLR + +K++VPL F +DV G++ GG +
Sbjct: 76 AIL--------KDVQRHPAKGFPMHVDFLRVQADKAIKVNVPLHFTNEDVCHGVKMGGGM 127
Query: 190 NTIKRT-VKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
+ T ++ C P DI P YI+VD+S +++ Q + D+
Sbjct: 128 VQHQATDMEVQCLPGDI-PDYIEVDMSAVELGQIVHLSDV 166
>gi|365092330|ref|ZP_09329478.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
sp. NO-1]
gi|363415454|gb|EHL22581.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
sp. NO-1]
Length = 211
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 30/204 (14%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLG 110
+A RA GT S + R +G+ P IV+ GG +LI + N + L
Sbjct: 2 NFVAFERAKQGTGASRRLRNSGKTPGIVY-------GGTTEPQLIELDHNALWHA---LK 51
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
+ F S + D+EV +VL R V H L++ F R + L + V
Sbjct: 52 KEAFHSSVLDMEVAGTTS--------KVLLRDVQYHPFKQLVLHIDFQRVDEKTKLHMKV 103
Query: 171 PLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
PL F G + SP ++ +N + + C +P +I VDLS+L+ + D+K+
Sbjct: 104 PLHFSGAEESPAVKVDKCMINPVVNELDVTCMPSDLPEFIAVDLSKLEKGTSLHLKDIKL 163
Query: 230 HPALKLLRSKDEPVCKIAGGRASD 253
+ V K+ GG+ ++
Sbjct: 164 PKGV---------VAKVRGGQNNN 178
>gi|410613078|ref|ZP_11324146.1| large subunit ribosomal protein L25 [Glaciecola psychrophila 170]
gi|410167220|dbj|GAC38035.1| large subunit ribosomal protein L25 [Glaciecola psychrophila 170]
Length = 210
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 19/177 (10%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G S + R AG+VP++++ G NK IS+ KL
Sbjct: 7 TLDAEIRTDLGKGASRRLRHAGKVPAVLY-------GANKEAISLTLIH-NKLFQAQSFE 58
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F S + L + E KV VL + + H+ +++ FLR + L+ +VPL
Sbjct: 59 AFYSHVLTLNIGEE--------KVEVLVKDMQRHAFKPIVMHLDFLRIDAKKALQTNVPL 110
Query: 173 VFRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
F ++ + ++ GG+ V+ C PAD+ P +I+VDL ++++Q I DL
Sbjct: 111 HFLNEEKAESIKLNGGHAEHHMLDVEVSCLPADL-PEFIEVDLLNVELDQTIHLSDL 166
>gi|406915162|gb|EKD54270.1| 50S ribosomal protein L25 [uncultured bacterium]
Length = 238
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S + R +VP++++ G + S+ + K + L F S +
Sbjct: 13 RQDIGKGASRRLRHTDKVPAVIY-------GAGEAPESLTLDH-NKALNALSHEAFYSHI 64
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
L+V G EKV + + V H ++ FLR + L + VP F G++
Sbjct: 65 LTLKV------GKKNEKV--ILKAVQRHPAKPRIAHIDFLRIRADQKLHMHVPFHFLGEE 116
Query: 179 VSPGLRKGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
+PGL++GG + + V+ +C PAD+ P +I++D S L ++Q I +LK+
Sbjct: 117 NAPGLKEGGAFSHLMNDVEVVCLPADL-PEFIEIDASNLLLDQSIHLSELKL 167
>gi|407716988|ref|YP_006838268.1| 50S ribosomal protein L25 [Cycloclasticus sp. P1]
gi|407257324|gb|AFT67765.1| 50S ribosomal protein L25 [Cycloclasticus sp. P1]
Length = 216
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
RK VP++++ G + +S+ + + +FF S + ++V +
Sbjct: 24 RKQEMVPAVIY-------GAGEEPVSITLGHNQLMHSTENEAFF-SHILSIDVDGK---- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
K V+ + + H + ++ F+R + LK+ VP+ F G++ +PG ++GG +
Sbjct: 72 ----KESVIIKALQRHPAKNILMHADFMRVSMKEKLKVHVPIHFIGEEEAPGAKQGGVVT 127
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK---LLRSKDE--PVCK 245
V+ C + +P +I+VD+S L++ + D+K+ L+ LL+ +D V
Sbjct: 128 HSLVDVEIQCLPNNLPEFIEVDVSALEIGDSLHLSDIKLADGLEMVALLQGEDHDLQVVA 187
Query: 246 IAGGRASD 253
I RA++
Sbjct: 188 IHANRAAE 195
>gi|340353101|ref|ZP_08675930.1| 50S ribosomal protein L25 [Prevotella pallens ATCC 700821]
gi|339611452|gb|EGQ16278.1| 50S ribosomal protein L25 [Prevotella pallens ATCC 700821]
Length = 205
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 16/192 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R + G + S + RK G +P ++ + + +++RKLV + +
Sbjct: 11 REATGKKASKELRKEGMIPCNLYGEATADGKPVALSFAAPMSELRKLV-------YTPHI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
+ +E+ + + I K ++ H TDA L++ F + + VP+ G
Sbjct: 64 YLVELNIDGKNHGAIMK------EIQFHPTTDAILHIDFYEVNETKPIVMGVPVKHIG-- 115
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
++ G+R GG +N R + P +P +D+D+++L + + I GDL L+L+ S
Sbjct: 116 LAQGVRDGGRMNKSIRKIDVKAPYAQIPETLDIDVTKLRIGKSIKVGDLSFE-GLELVTS 174
Query: 239 KDEPVCKIAGGR 250
KD VC I R
Sbjct: 175 KDVVVCSIKNTR 186
>gi|451811971|ref|YP_007448425.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451777873|gb|AGF48821.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 205
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 16/177 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A+ R GT S + R GRVP+I++ GG+ ++++ + ++ L +
Sbjct: 3 INALLRDMHGTSASRRLRHVGRVPAIIY-------GGSSLPMTIELDH-NEIYHALRKEK 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + + + ++ +V+ R V H L++ F R + VPL
Sbjct: 55 FHSSILKITINNKGTE-------QVILRSVQWHPYKQQVLHIDFQRVESNQEISTKVPLH 107
Query: 174 FRGDDVSPGLRKGG-YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F +D+SP ++ GG + + + C ++P +IDVDLS + + + D+ +
Sbjct: 108 FLNEDISPAVKVGGAIIRHVMTELDITCMPALLPQFIDVDLSGVSLGDSVHLSDINL 164
>gi|58583225|ref|YP_202241.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84625061|ref|YP_452433.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
oryzae pv. oryzae MAFF 311018]
gi|68053027|sp|Q5GWR5.1|RL25_XANOR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|109893406|sp|Q2NZW8.1|RL25_XANOM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|58427819|gb|AAW76856.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84369001|dbj|BAE70159.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 211
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G S + R AG +P+IV+ GG +S+Q N + + F+ S +
Sbjct: 12 RADEGKGASRRLRHAGVIPAIVY-------GGELEPVSIQLNHEQIWLAQQNEWFY-SSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
DL + +GD+ +VL R + H +++ F R L VPL F ++
Sbjct: 64 LDLNL-----NGDV---QQVLLRDIQRHPFKQLIMHIDFQRVSANQKLSAAVPLHFINEE 115
Query: 179 VSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPA 232
SP + + T + V+ +C +P +I+VDL L+V I ++K+ P
Sbjct: 116 ASPAGKSSEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEIPE 175
Query: 233 LKLLRSKDEPVC 244
LKL + +D V
Sbjct: 176 LKLGKERDVAVV 187
>gi|388457340|ref|ZP_10139635.1| 50S ribosomal protein L25/general stress protein Ctc [Fluoribacter
dumoffii Tex-KL]
Length = 221
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 21/187 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R +VP++++ GG+K+ +S+ Q K+V L S +FD+ V +
Sbjct: 24 RLENKVPAVIY-------GGDKKPMSIHF-QHNKVVKALETESIYSSVFDITVDGKVE-- 73
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
V+ + + H +++ R +L VP+ F ++ +PG++ GG +N
Sbjct: 74 ------HVILKALQRHPYKPVVMHMDLQRVSKTDILVKLVPIHFTNEEKAPGIKAGGIIN 127
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL-----RSKDEPVCK 245
V+ C A +P +I VD+S++ ++ + +LK+ ++L S D PV
Sbjct: 128 HTMTQVEVRCQAKDLPEFITVDMSDVKMDDVVHLSNLKLPKGVQLTVDVTDGSHDSPVVS 187
Query: 246 IAGGRAS 252
I +AS
Sbjct: 188 IHMSKAS 194
>gi|254251379|ref|ZP_04944697.1| 50S ribosomal protein L25 [Burkholderia dolosa AUO158]
gi|124893988|gb|EAY67868.1| 50S ribosomal protein L25 [Burkholderia dolosa AUO158]
Length = 206
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 21/177 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R GT S + R AG+ IV+ GG ++I + N + L +
Sbjct: 7 VVAFERQQQGTGASRRLRNAGKTTGIVY-------GGEAAPQMIELDHNALWHA---LKK 56
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + DLEV + +VL R V H L+V F R + L VP
Sbjct: 57 EAFHSSILDLEVAGK--------SQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVP 108
Query: 172 LVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
L F + SP ++ ++ + ++ C +P +++VDLS+++ Q + A D+
Sbjct: 109 LHFLNAETSPAVKLSSAVISHVATEIEVECLPAALPEFLEVDLSKIEAGQSVHAKDI 165
>gi|332285374|ref|YP_004417285.1| 50S ribosomal protein L25 [Pusillimonas sp. T7-7]
gi|330429327|gb|AEC20661.1| 50S ribosomal protein L25 [Pusillimonas sp. T7-7]
Length = 207
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ GT S + R AGRVP+IV+ GG +S++ + ++ L + F
Sbjct: 5 ATSRSDKGTSASRRLRHAGRVPAIVY-------GGTADPLSIELDH-NEIFHALRKEAFH 56
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + D+++ G G +VL R V H L+V F R + + VPL F
Sbjct: 57 ASILDMQLD---GKGQ-----QVLLRAVQWHPYKPQVLHVDFQRVDAKQTITTKVPLHFI 108
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
D SP ++ G ++ + ++ C P D+ P I++DL EL + D+ +
Sbjct: 109 NGDASPAVKLSGQIISHVMTELEITCLPVDL-PQAIEIDLGELAAGGNVYLSDITL 163
>gi|319945392|ref|ZP_08019653.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lautropia
mirabilis ATCC 51599]
gi|319741385|gb|EFV93811.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lautropia
mirabilis ATCC 51599]
Length = 215
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 19/178 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R GT S + R+A +VP IV+ GG I V + L L
Sbjct: 3 ISAQERKDVGTSASRRLRRANQVPGIVY-------GGEAAPIQVALDH-NTLYHALRVEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + D+++ + K RVL R V H L+V F R + + VPL
Sbjct: 55 FHSSILDMDIDGK--------KQRVLLRNVQWHPYKQQVLHVDFQRVAANQKITVKVPLH 106
Query: 174 FRGDDVSPGLRKG-GYLNTIKRTVKF-LCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F + SP +++ +N + ++ + P D+ P +I+VDL+EL +E I +K+
Sbjct: 107 FINGENSPAVKQTKAVVNHVMTEIEVQVLPKDL-PEFIEVDLAELAMEHSIHLSSIKL 163
>gi|430376071|ref|ZP_19430474.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
macacae 0408225]
gi|429541302|gb|ELA09330.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
macacae 0408225]
Length = 242
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 15/167 (8%)
Query: 63 GTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLE 122
G S + RK +VP+I++ G +K ++V + +L+ L F S + +
Sbjct: 20 GKGASRRLRKQNQVPAIIY-------GADKEPLAVAL-RYNELIKSLQTEAFFSHILTIN 71
Query: 123 VRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPG 182
V G G V+ + + H + P++ F R + + VP + G DV+PG
Sbjct: 72 VE---GHG----TEEVVIKDLQRHPAKNTPMHADFQRIVRGQEMHVTVPFHYEGADVAPG 124
Query: 183 LRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
++GG + ++ C +P +I VD+S + + I D+ +
Sbjct: 125 HKEGGIFTSNATEIEVTCIPSKIPEFIKVDVSSMQIGDSIHLQDVTM 171
>gi|319795630|ref|YP_004157270.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Variovorax
paradoxus EPS]
gi|315598093|gb|ADU39159.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Variovorax
paradoxus EPS]
Length = 223
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 17/192 (8%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
+A RA GT S + R +G+ P IV+ G G +LI + N + L +
Sbjct: 3 FVAFERAKQGTGASRRLRISGKTPGIVY----GGEGLQPQLIEIDHNALWHA---LKKEA 55
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + ++E+ +VL R V H ++ F R + L + VPL
Sbjct: 56 FHSSILEMELGGATS--------KVLLRDVQYHPFRQLVQHIDFQRVDAKTRLHMKVPLH 107
Query: 174 FRGDDVSPGLRKGGYL-NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F+G++ S ++ L N + ++ C +P +I+VDLS L + D+K+
Sbjct: 108 FKGEEESEAVKTAHNLVNHVITELEISCLPSDLPEFIEVDLSGLTKNATLHVNDIKLPKG 167
Query: 233 LKLL-RSKDEPV 243
+K + K PV
Sbjct: 168 VKYVSHGKQNPV 179
>gi|83644562|ref|YP_432997.1| 50S ribosomal protein L25/general stress protein Ctc [Hahella
chejuensis KCTC 2396]
gi|109893366|sp|Q2SLA2.1|RL25_HAHCH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|83632605|gb|ABC28572.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hahella
chejuensis KCTC 2396]
Length = 208
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 21/168 (12%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFG 128
R G+VP I++ GG ISV NQ+ L F S + L+V
Sbjct: 25 RVDGKVPGIIY-------GGETAPVAISVSHNQLSHA---LQNEAFYSHILTLDVEGTNE 74
Query: 129 SGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGY 188
S V+ + + H ++ FLR + L ++VPL F +D G+R+GG
Sbjct: 75 S--------VILKDLQRHPYKPIIMHADFLRVQKDQKLHVNVPLHFINEDKCEGVRQGGG 126
Query: 189 LNTIKRT-VKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
+ ++T V+ +C +P +I+VD++ + VEQ + DLK+ ++L
Sbjct: 127 SISHQQTEVEVICLPANLPEFIEVDMTSVQVEQILHLSDLKLPEGVEL 174
>gi|333378291|ref|ZP_08470022.1| 50S ribosomal protein L25 [Dysgonomonas mossii DSM 22836]
gi|332883267|gb|EGK03550.1| 50S ribosomal protein L25 [Dysgonomonas mossii DSM 22836]
Length = 192
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 26/198 (13%)
Query: 58 PRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR---LISVQTNQIRKLVGHLGRSFF 114
R G + + RK ++P++++ GG++ +V + +RKL+ +
Sbjct: 10 ARTDLGKKATKAFRKEDKIPAVIY-------GGDQTEAIAFTVTNSDVRKLI-------Y 55
Query: 115 VSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVF 174
+F V G + + + + V +H TDA L++ FL + +DVP++
Sbjct: 56 TPEIF--LVNLTIGK----DSYKAILKDVQVHPVTDAILHLDFLHVFEGKPIVMDVPVIL 109
Query: 175 RGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
D ++ G++ GG L+ R +K D +P + VD++ L + + I G+L L+
Sbjct: 110 --DGLAEGVKAGGKLSLDLRKIKVKALYDKIPEKVHVDVTSLALGKSIQVGELHFE-GLE 166
Query: 235 LLRSKDEPVCKIAGGRAS 252
LL +K+ VC++ RA+
Sbjct: 167 LLNAKNAVVCRVQLTRAA 184
>gi|326802495|ref|YP_004320314.1| 50S ribosomal protein L25 [Sphingobacterium sp. 21]
gi|326553259|gb|ADZ81644.1| 50S ribosomal protein L25 [Sphingobacterium sp. 21]
Length = 195
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 22/197 (11%)
Query: 58 PRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSR 117
PR + G R + + R AG+VP++++ GG + +V ++ L+ +F
Sbjct: 10 PRENVGKRDAKELRYAGKVPAVLY------GGGEQYHFAVSAADLKPLIYTPEVNFV--- 60
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
DLE+ SG +K + + ++ H TD ++V FL + + +++P+ G
Sbjct: 61 --DLEI-----SG---KKYQAIVQEAQYHPLTDQIIHVDFLALSDDKAVSMNIPIALTG- 109
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
SPG++ GG L R ++ +P I+V L L+V + + G ++V A K+L
Sbjct: 110 -TSPGVKMGGKLVQKLRKLRVKALPKDMPQVIEVSLESLEVGKSVRVGAVEVKNA-KILN 167
Query: 238 SKDEPVCKIAGGRASDQ 254
+ D+ + + RA Q
Sbjct: 168 NADDTIVSVIMSRALKQ 184
>gi|78067602|ref|YP_370371.1| 50S ribosomal protein L25 [Burkholderia sp. 383]
gi|109893349|sp|Q39CT9.1|RL25_BURS3 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|77968347|gb|ABB09727.1| LSU ribosomal protein L25P [Burkholderia sp. 383]
Length = 201
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 19/176 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R AG+ IV+ GG ++ + L L +
Sbjct: 3 VVAFERQEQGTGASRRLRNAGKTTGIVY-------GGEAAPQKIELDH-NALWHALKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + +VL R V H L+V F R + L PL
Sbjct: 55 FHSSILDLEVAGQ--------SQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
F ++SP ++ ++ + ++ C PAD+ P +++VDLS+++ Q + A D+
Sbjct: 107 FLNAEISPAVKLSSAIVSHVATEIEIECLPADL-PEFLEVDLSKIEAGQSLHAKDI 161
>gi|323344944|ref|ZP_08085168.1| 50S ribosomal protein L25 [Prevotella oralis ATCC 33269]
gi|323094214|gb|EFZ36791.1| 50S ribosomal protein L25 [Prevotella oralis ATCC 33269]
Length = 209
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
E+ + +++ H TDA L+V F + + I +P+ G ++ G+R GG +N
Sbjct: 73 EEHTAILKELQFHPVTDALLHVDFFEVNDQKPITIGIPVKLVG--LAQGVRDGGRMNLSI 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRAS 252
R + P +P ++D+D+++L + + I G+L + L+L KD VC I R +
Sbjct: 131 RKINVTAPYQQIPEHLDIDVTKLTIGKSIKVGELS-YEGLELATGKDVVVCSIKMTRQA 188
>gi|387133055|ref|YP_006299027.1| 50S ribosomal protein L25 [Prevotella intermedia 17]
gi|386375903|gb|AFJ08980.1| ribosomal protein L25, Ctc-form [Prevotella intermedia 17]
Length = 205
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 16/194 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R + G + S + RK G +P ++ + +++RKL+ + +
Sbjct: 11 RETTGKKASKELRKEGMIPCNLYGEAKADGKPVAFSFVAPMSELRKLI-------YTPHI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
+ +E+ D + ++ +++ H TDA L++ F + + VP+ G
Sbjct: 64 YLVELNI-----DGVNHAAIM-KEIQFHPTTDAVLHIDFYEVNESKPIVMGVPVKHIG-- 115
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
++ G+R GG +N R + P +P +D+D+++L + + I GDL L+L+ S
Sbjct: 116 LAQGVRDGGRMNKSIRKINVRAPYAQIPETLDIDVTKLRIGKSIKVGDLSFE-GLELITS 174
Query: 239 KDEPVCKIAGGRAS 252
KD VC I R +
Sbjct: 175 KDVVVCSIKNTRNA 188
>gi|83951141|ref|ZP_00959874.1| ribosomal protein L25 [Roseovarius nubinhibens ISM]
gi|83839040|gb|EAP78336.1| ribosomal protein L25 [Roseovarius nubinhibens ISM]
Length = 193
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Query: 76 VPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEK 135
VP IVF GG+ + + +L L F S LF+L+V + E
Sbjct: 2 VPGIVF-------GGDAEPLPINI-PFNELFKRLKAGRFKSTLFNLKVEGQ-------ED 46
Query: 136 VRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRT 195
VRV+ R V D P ++ +R + + +PL F ++ P ++KGG L T++
Sbjct: 47 VRVICRDVQRDVVKDLPTHLDLMRLRRTTKINLFIPLDFTNEEECPAIKKGGVLTTVRNE 106
Query: 196 VKFLCPADIVPPYIDVDLSELD 217
++ + A +P I+VDL++++
Sbjct: 107 IELIVTAGDIPDAIEVDLTKIE 128
>gi|134296999|ref|YP_001120734.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
vietnamiensis G4]
gi|387903316|ref|YP_006333655.1| 50S ribosomal protein L25 [Burkholderia sp. KJ006]
gi|166223669|sp|A4JHZ6.1|RL25_BURVG RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|134140156|gb|ABO55899.1| LSU ribosomal protein L25P [Burkholderia vietnamiensis G4]
gi|387578208|gb|AFJ86924.1| LSU ribosomal protein L25p [Burkholderia sp. KJ006]
Length = 201
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 17/188 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R AG+ IV+ GG ++ + L L +
Sbjct: 3 VVAFERQQQGTGASRRLRNAGKTTGIVY-------GGEAAPQKIELDH-NALWHALKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + DLE+ + +VL R V H L+V F R + L VPL
Sbjct: 55 FHASILDLEIAGQ--------SQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F +VSP ++ ++ + ++ C +P +++VDLS+++ Q + A D+ +
Sbjct: 107 FLNAEVSPAVKLSSAIVSHVTTEIEVECLPSALPEFLEVDLSKIEAGQSLHAKDIALPNG 166
Query: 233 LKLLRSKD 240
+ L+ D
Sbjct: 167 VALVAHVD 174
>gi|254486127|ref|ZP_05099332.1| ribosomal protein L25, Ctc-form [Roseobacter sp. GAI101]
gi|214042996|gb|EEB83634.1| ribosomal protein L25, Ctc-form [Roseobacter sp. GAI101]
Length = 186
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 76 VPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEK 135
VP IVF GG+ + + + KL+ L F + LF+++V +
Sbjct: 2 VPGIVF-------GGDVDPLPINLD-FNKLLTKLRAGRFKATLFNMKVEGH-------DD 46
Query: 136 VRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRT 195
VRV+ R V H D P +V F+R + + + + G++ PGL+KGG L ++
Sbjct: 47 VRVICRDVQRHVVKDLPTHVDFMRLKRTTKINLFIQVEVSGEEECPGLKKGGVLTLVRPE 106
Query: 196 VKFLCPADIVPPYIDVDLSELDV 218
V+ + A +P +I VD+S L +
Sbjct: 107 VELVVTAGDIPDHITVDISGLQI 129
>gi|417301020|ref|ZP_12088193.1| Ribosomal protein L25 [Rhodopirellula baltica WH47]
gi|421614201|ref|ZP_16055266.1| Ribosomal protein L25 [Rhodopirellula baltica SH28]
gi|440717722|ref|ZP_20898203.1| Ribosomal protein L25 [Rhodopirellula baltica SWK14]
gi|327542674|gb|EGF29145.1| Ribosomal protein L25 [Rhodopirellula baltica WH47]
gi|408495067|gb|EKJ99660.1| Ribosomal protein L25 [Rhodopirellula baltica SH28]
gi|436437145|gb|ELP30809.1| Ribosomal protein L25 [Rhodopirellula baltica SWK14]
Length = 205
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 22/199 (11%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGR 111
+ I R S GT + + R+ G VP++++ HG ++V + Q++ L+ H +
Sbjct: 3 DVIQVTKRESTGTAATRRLRRDGHVPAVLY-----GHGEANEHLAVPSAQVKGLLRHHSK 57
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
+ +S D L+ ++ P + + L++ +R + +++ VP
Sbjct: 58 TVQLSGDVD--------ETALVSDMQWDPLGIEV-------LHMDLIRVNLKEKVELGVP 102
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
+V G+ V G+R+GG L V+ C A +P + +++SEL V + AGDL +
Sbjct: 103 IVLHGEAV--GVREGGMLLENVHEVEIRCSAGSIPDNLVLEVSELGVGEHKTAGDLTLPE 160
Query: 232 ALKLLRSKDEPVCKIAGGR 250
++L+ D + I R
Sbjct: 161 GVELITDVDVVIAHIEAQR 179
>gi|86136043|ref|ZP_01054622.1| ribosomal protein L25 [Roseobacter sp. MED193]
gi|85826917|gb|EAQ47113.1| ribosomal protein L25 [Roseobacter sp. MED193]
Length = 209
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 15/194 (7%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A RA G + R+AG VP +V+ GG+ +S+Q L+ L
Sbjct: 8 LVAEERAGTGKGAARAARRAGMVPGVVY-------GGDADPLSIQI-PFNVLLKKLKAGK 59
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S L++L+V + E VRV+ R V D P ++ +R + + + +P+
Sbjct: 60 FKSTLWNLKVEGQ-------EDVRVICRDVQRDVVKDLPTHLDLMRLRRTSEINLFIPVE 112
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
F +D PG++KGG L ++ V+ + A +P + VDL+ + I +++
Sbjct: 113 FINEDTCPGVKKGGMLAVVRPEVELVVTAGDIPEKLTVDLANSQIGDVITISSIELPTGA 172
Query: 234 KLLRSKDEPVCKIA 247
+ +D + IA
Sbjct: 173 RPTIDRDFVIANIA 186
>gi|445494493|ref|ZP_21461537.1| 50S ribosomal protein L25 [Janthinobacterium sp. HH01]
gi|444790654|gb|ELX12201.1| 50S ribosomal protein L25 [Janthinobacterium sp. HH01]
Length = 210
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R G+ S + R +G+ P I++ GG + +++ + L L +
Sbjct: 3 VVAFKRELQGSGASRRLRNSGQTPGIIY-------GGTEAPVTISLDH-NALYHALKKEV 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLE+ D + + +VL R +H+ L+ F R + + V L
Sbjct: 55 FHSSILDLEI-------DGVTQ-QVLLRDFQVHAYKQLVLHADFQRVDASKKVHMKVALH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
F DVSP ++ G ++ + ++ C +P ++ VDLS +DV + DL
Sbjct: 107 FANADVSPAVKLHGATISHVANEIEVSCLPKDLPEFVTVDLSTIDVGHSLHIADL 161
>gi|229495615|ref|ZP_04389348.1| ribosomal protein L25, Ctc-form [Porphyromonas endodontalis ATCC
35406]
gi|229317598|gb|EEN83498.1| ribosomal protein L25, Ctc-form [Porphyromonas endodontalis ATCC
35406]
Length = 189
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 89/188 (47%), Gaps = 22/188 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G + + RK G +P++++ E H ++V + +R L+ + +
Sbjct: 11 REGLGKKATKSLRKQGIIPAVIYGGEATHH------LTVTQDAVRNLI-------YTPEI 57
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
FD+++ S G + + + + + H TD L++ FL + ++++VP+V G
Sbjct: 58 FDIDL-SVAG-----KTCKAVLKDIQFHPVTDEILHIDFLEVNKDKAIEMEVPVVLEGH- 110
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
+ G+R GG L R ++ D +P + +++ L++ + + G L L+++ +
Sbjct: 111 -AAGVRAGGKLVLEMRKLRVKAIYDQIPERLHINVENLELGKSMQVGALSF-EGLEIMNA 168
Query: 239 KDEPVCKI 246
K+ VC +
Sbjct: 169 KNAVVCAV 176
>gi|217967173|ref|YP_002352679.1| 50S ribosomal protein L25/general stress protein Ctc [Dictyoglomus
turgidum DSM 6724]
gi|226736311|sp|B8DZY2.1|RL25_DICTD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|217336272|gb|ACK42065.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dictyoglomus
turgidum DSM 6724]
Length = 207
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLV--GHLGRSFFVS 116
R G + + K R++ +P +V+ G H I V+ + L+ GH +
Sbjct: 11 RDKIGKQFAKKYRRSNLIPGVVY----GAHLKENIHILVEKKDLWSLIKKGHAKEQHLL- 65
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
RL + +++ +++ P K D L+V F E L+ + VP++ G
Sbjct: 66 RLIIENGENTITENAILQDLQIDPIK-------DEFLHVDFHAITLEELVDVYVPILLVG 118
Query: 177 DDVSPGLRKGGYL-NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
+ + G+++GG L + ++ + P D VPP+I+VD+++L++ + I GDLK +K+
Sbjct: 119 E--AKGIKQGGILQHGVEEILIRALPLD-VPPHIEVDITDLEIGESITVGDLKFPENIKV 175
Query: 236 LRSKDEPVCKI 246
L DE V I
Sbjct: 176 LTPLDEVVVGI 186
>gi|319761697|ref|YP_004125634.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5
[Alicycliphilus denitrificans BC]
gi|330823568|ref|YP_004386871.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Alicycliphilus denitrificans K601]
gi|317116258|gb|ADU98746.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Alicycliphilus denitrificans BC]
gi|329308940|gb|AEB83355.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Alicycliphilus denitrificans K601]
Length = 208
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 21/186 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
+A RA GT S + R +G+ P IV+ GG+ ++I V N + L +
Sbjct: 3 FVAYERAKQGTGASRRLRISGKAPGIVY-------GGSAEPQMIEVDHNALWHA---LKK 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + D+E+ + +VL R V H L+V F R + + + VP
Sbjct: 53 EAFHSSILDMELNGQV--------TKVLLRDVQYHPFKQQVLHVDFQRVDDKTRVHLKVP 104
Query: 172 LVFRGDDVSPGLRKGGYLNT-IKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVH 230
L + G + SP +++ G T + V +C +P +I VDLS L + LK+
Sbjct: 105 LHYEGLEGSPAVKEEGCTVTPLIHEVDVMCMPSQLPEFITVDLSGLTSKSAPGVQSLKIP 164
Query: 231 PALKLL 236
+K++
Sbjct: 165 NGVKIV 170
>gi|445112705|ref|ZP_21377260.1| ribosomal protein L25, Ctc-form [Prevotella nigrescens F0103]
gi|444841534|gb|ELX68549.1| ribosomal protein L25, Ctc-form [Prevotella nigrescens F0103]
Length = 205
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R + G + S + RK G +P ++ + + ++IRKLV + +
Sbjct: 11 REATGKKASKELRKEGMIPCNLYGEATADGKPVALSFASPMSEIRKLV-------YTPHI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
+ +E+ + + + K ++ H TDA L++ F + + VP+ + G
Sbjct: 64 YLVELNIDGKNHAAVMK------EIQFHPTTDAVLHIDFYEVNETKPIVMGVPVKYVG-- 115
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
++ G+R GG +N R + P +P +D++++ L + + I GDL L+L+
Sbjct: 116 LAQGVRDGGRMNKSIRKINVKAPYAQIPETLDINVTNLRIGKSIKVGDLSFE-GLELVTP 174
Query: 239 KDEPVCKIAGGR 250
KD VC I R
Sbjct: 175 KDVVVCSIKNTR 186
>gi|340349752|ref|ZP_08672756.1| 50S ribosomal protein L25 [Prevotella nigrescens ATCC 33563]
gi|339610291|gb|EGQ15148.1| 50S ribosomal protein L25 [Prevotella nigrescens ATCC 33563]
Length = 205
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R + G + S + RK G +P ++ + + ++IRKLV + +
Sbjct: 11 REATGKKASKELRKEGMIPCNLYGEATADGKPVALSFASPMSEIRKLV-------YTPHI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
+ +E+ + + + K ++ H TDA L++ F + + VP+ + G
Sbjct: 64 YLVELNIDGKNHAAVMK------EIQFHPTTDAVLHIDFYEVNETKPIVMGVPVKYVG-- 115
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
++ G+R GG +N R + P +P +D++++ L + + I GDL L+L+
Sbjct: 116 LAQGVRDGGRMNKSIRKINVKAPYAQIPETLDINVTNLRIGKSIKVGDLSFE-GLELVTP 174
Query: 239 KDEPVCKIAGGR 250
KD VC I R
Sbjct: 175 KDVVVCSIKNTR 186
>gi|383811354|ref|ZP_09966823.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 306 str.
F0472]
gi|383356104|gb|EID33619.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 306 str.
F0472]
Length = 200
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTN--QIRKLVGHLGRSFFVS 116
R G + S + RK G VP ++ + Q G +S + ++RKLV + + V
Sbjct: 11 RTDLGKKASKQLRKEGLVPCNLYG--EAQKDGKPLALSFTASMAELRKLV-YTPHIYVVE 67
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
+ D E + + +++ H TDA L+V F + + + VP+ G
Sbjct: 68 LVIDGERHT------------AVLKELQFHPVTDALLHVDFYEVNDQKPIVMGVPVKLVG 115
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
++ G+R GG +N R + P +P ++D+D++ L + + I G+L L+L+
Sbjct: 116 --LAQGVRDGGRMNMSIRKINVKAPYQQIPEHLDIDVTNLHLGKSIKVGELSFE-GLELV 172
Query: 237 RSKDEPVCKIAGGRASDQ 254
K+ VC I R S Q
Sbjct: 173 TPKEVVVCSIKATRNSIQ 190
>gi|268317962|ref|YP_003291681.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodothermus
marinus DSM 4252]
gi|262335496|gb|ACY49293.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodothermus
marinus DSM 4252]
Length = 202
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 22/196 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI A PR + G R + R+ G VP I++ G H V+ + L L
Sbjct: 5 TIEAKPRET-GKRAARAIRREGWVPCILY----GHH--------VEPIPFQMLESKLRPL 51
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ + ++++ + D I K V H TD PL+ F E + + VP+
Sbjct: 52 IYTTETHLVKLQLNGKTWDCILK------DVEFHPVTDRPLHADFQVLRAEEKVTVTVPV 105
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
G + G+++GG L + ++ C +P +ID+D+S LD+ I GDL+
Sbjct: 106 QIVGTAI--GVQRGGVLQIVTHELEVTCLPKDIPAHIDIDVSNLDIGDAIHVGDLQFE-G 162
Query: 233 LKLLRSKDEPVCKIAG 248
L+ + D+ V IA
Sbjct: 163 LEFEDAPDQTVVVIAA 178
>gi|374855865|dbj|BAL58720.1| 50S ribosomal protein L25/general stress protein Ctc [uncultured
candidate division OP1 bacterium]
Length = 241
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 20/159 (12%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ GR+P +++ E I+V ++ KL+ + RS ++ + D + F
Sbjct: 20 RRQGRIPGVLYGHE------VHHPIAVDAKELEKLLARITRSSRITLIMDGKQLPAF--- 70
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
I++++ P TD +++ F P+ + IDVP+ G+ G ++GG L
Sbjct: 71 --IKEIQYDPL-------TDRVIHIDFYHPAPDRPVTIDVPVRLHGEPA--GRKEGGVLQ 119
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
++ VK P D +P I++D++ L + Q + +LK+
Sbjct: 120 LLRDVVKVRGPMDAIPEIIEIDVTNLGIGQAVHVNELKL 158
>gi|385207047|ref|ZP_10033915.1| ribosomal protein L25, Ctc-form [Burkholderia sp. Ch1-1]
gi|385179385|gb|EIF28661.1| ribosomal protein L25, Ctc-form [Burkholderia sp. Ch1-1]
Length = 205
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R+ GT S + R +G+ P IV+ G +L+ + N + L +
Sbjct: 3 VVAFERSLQGTGASRRLRNSGKTPGIVYGA-----GAETQLVELDHNALWHA---LKKEV 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + +LEV + +VL R V H L+V F R + L VPL
Sbjct: 55 FHSSILELEVAGK--------SQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F + +P ++ ++ + ++ C +P +++VDL+ ++ + A D+K+
Sbjct: 107 FLNQESNPAVKLASAVISHVINEIEIECLPSALPEFLEVDLATIEAGHSVHAKDIKL 163
>gi|282879731|ref|ZP_06288461.1| ribosomal protein L25, Ctc-form [Prevotella timonensis CRIS 5C-B1]
gi|281306400|gb|EFA98430.1| ribosomal protein L25, Ctc-form [Prevotella timonensis CRIS 5C-B1]
Length = 216
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 24/198 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVF--EQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVS 116
R G + S RK G VP ++ ++EDG+ + +++RK+V +
Sbjct: 11 REDLGKKASKHLRKEGLVPCNLYGEQKEDGKPVA--LAFAAPMSELRKIV-------YTP 61
Query: 117 RLF--DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVF 174
++ +L + E + L +++ H TDA L+V F + + I +P+
Sbjct: 62 HIYVINLNIDGEHHTAIL--------KELQFHPVTDALLHVDFYAVNDQKPITIGIPVKL 113
Query: 175 RGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
G ++ G+R GG +N R + P +P ++D+D+++L + + I G L L
Sbjct: 114 VG--LAQGVRDGGRMNLSVRKINVTAPYQQIPEHLDIDVTKLRIGKSIKVGQLSF-DGLT 170
Query: 235 LLRSKDEPVCKIAGGRAS 252
+ SKD VC I R++
Sbjct: 171 MATSKDVVVCSIKMTRSA 188
>gi|428218486|ref|YP_007102951.1| 50S ribosomal protein L25 [Pseudanabaena sp. PCC 7367]
gi|427990268|gb|AFY70523.1| LSU ribosomal protein L25P [Pseudanabaena sp. PCC 7367]
Length = 194
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVR-SEFGS 129
R+ G++P V+ G G I V + L+ H + + L L + SEF
Sbjct: 20 RRDGQIPGTVY----GHLGNQSTSIVVAKKDVDYLMRHAKVN---NTLIKLNIADSEF-- 70
Query: 130 GDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYL 189
+ V VL R+V H +++F + + +DVPL F G G++ GG L
Sbjct: 71 ----DGVTVL-REVQTHPFRRQVFHLSFFAIESQKAVDLDVPLNFIG--TPKGIKVGGVL 123
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
+ + + VK CP + VP ID+ +S LDV + I GD+
Sbjct: 124 DILIKEVKVSCPPNNVPEKIDIHISHLDVGKGIRVGDI 161
>gi|334119848|ref|ZP_08493932.1| 50S ribosomal protein L25 [Microcoleus vaginatus FGP-2]
gi|333457489|gb|EGK86112.1| 50S ribosomal protein L25 [Microcoleus vaginatus FGP-2]
Length = 201
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSR-LFDLEVRSEFGS 129
R++G +P++++ G+K S+ K V HL + V+ L DL + S
Sbjct: 20 RRSGLIPAVLY--------GHKGSESISLTIKAKTVEHLLKKHVVNNALIDLSIPDLSWS 71
Query: 130 GDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYL 189
G + L R+V +H P +++F + L++++ L F G+ V L +GG L
Sbjct: 72 G------KTLLREVQVHPWKGYPYHLSFFSVATQDSLEVELSLRFVGEPVGVKL-EGGIL 124
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGG 249
+T+ + C D +P I+VD+S L V + +L + + L D+ V + G
Sbjct: 125 DTVLTQLAVKCKPDSIPEAIEVDISNLKVGDAVHIHELVLPEGVVALGEPDQVVVTVLGI 184
Query: 250 RA 251
+A
Sbjct: 185 QA 186
>gi|373850937|ref|ZP_09593738.1| 50S ribosomal protein L25 [Opitutaceae bacterium TAV5]
gi|372477102|gb|EHP37111.1| 50S ribosomal protein L25 [Opitutaceae bacterium TAV5]
Length = 236
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 20/188 (10%)
Query: 51 DETILAI-PRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHL 109
++ IL + PRA G S + RKA ++P+I++ G+H + L +V + +L+ L
Sbjct: 4 EQHILTVTPRAQTGRSASRRVRKANQIPAILY----GKHTSPQTL-AVDAPEFTRLLKSL 58
Query: 110 -GRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
GRS + E D EK ++V TD L+V + + I
Sbjct: 59 AGRSLII----------ELVRKDQGEKALSFLQEVQRDPITDRFLHVDLQEVKADEKMDI 108
Query: 169 DVPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
+VP+ G+ S G++ + G L+ T++ C +PP+I+VD++EL + I G++
Sbjct: 109 NVPVTLTGE--SFGVKNQNGVLDINAHTLRVRCLPKDLPPHIEVDVTELKAGESIKVGNI 166
Query: 228 KVHPALKL 235
K ++L
Sbjct: 167 KAPAGVEL 174
>gi|392966395|ref|ZP_10331814.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fibrisoma
limi BUZ 3]
gi|387845459|emb|CCH53860.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fibrisoma
limi BUZ 3]
Length = 189
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
++ R + ++ H +D L+ FL+ + +K+ VP+ G+ +PG++KGG L T
Sbjct: 67 DQYRAILQETQFHPVSDVLLHADFLQVADDKPVKVAVPVRIVGN--APGVQKGGKLVTRV 124
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
R ++ D +P YIDV++S+LD+ + I + V +++L PV I
Sbjct: 125 RKLRVKGTVDKIPDYIDVNVSDLDLGKSIRVNQIPVE-GIQMLEQGSNPVASI 176
>gi|384084006|ref|ZP_09995181.1| 50S ribosomal protein L25 [Acidithiobacillus thiooxidans ATCC
19377]
Length = 202
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLG 110
D I A+PR G R S + R+ G VP++++ G +S++ +RKL+
Sbjct: 3 DFAIAAMPREENGRRASRRLRRTGMVPAVLYGDNKAAMG-----LSIEARLLRKLLAD-- 55
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
R + + EF G K L R + +H + L++ F+R +++ V
Sbjct: 56 -----ERAYTHVITLEFPKG----KETALIRDLQMHPYKEEVLHMDFMRVHAGETVRLHV 106
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELD 217
P+ F ++ G++ GG L+ V+ P D +P I+VD++ L+
Sbjct: 107 PIHFLHENTCVGIKAGGVLHRALTDVEVEAPVDRLPEAIEVDIANLE 153
>gi|121607939|ref|YP_995746.1| 50S ribosomal protein L25/general stress protein Ctc
[Verminephrobacter eiseniae EF01-2]
gi|166223729|sp|A1WGH1.1|RL25_VEREI RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|121552579|gb|ABM56728.1| LSU ribosomal protein L25P [Verminephrobacter eiseniae EF01-2]
Length = 235
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 21/180 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLG 110
+A RA GT S + R +G+ P IV+ GG+ ++I + N + L
Sbjct: 2 NFVAFERAKQGTGASRRLRNSGKTPGIVY-------GGSAEPQMIELDHNALWHA---LK 51
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
+ F S + D+EV G D +VL R V H L++ F R + L + V
Sbjct: 52 KEAFHSSVLDMEVA---GKTD-----KVLLRDVQYHPFKQCVLHIDFQRVDDKTRLHMKV 103
Query: 171 PLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
PL + G + S ++ +N I + C +P +I VDLS+L+ + D+K+
Sbjct: 104 PLHYSGSEESNAVKVDKCMVNLIVNELDVTCMPSDLPEFIAVDLSKLEKGTSLHLKDIKL 163
>gi|148358613|ref|YP_001249820.1| 50S ribosomal protein L25 [Legionella pneumophila str. Corby]
gi|296108297|ref|YP_003619998.1| 50S ribosomal protein L25 [Legionella pneumophila 2300/99 Alcoy]
gi|166223693|sp|A5IAS4.1|RL25_LEGPC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|148280386|gb|ABQ54474.1| 50S ribosomal protein L25, ribosomal 5S rRNA E- loop binding
protein [Legionella pneumophila str. Corby]
gi|295650199|gb|ADG26046.1| large subunit ribosomal protein L25 [Legionella pneumophila 2300/99
Alcoy]
Length = 219
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 21/187 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R +VP++++ GG+K+ +++ + K++ L S +FD+ V +
Sbjct: 24 RLENKVPAVIY-------GGSKKPMAIHFSH-NKVIKALETESIYSSVFDITVDGKVE-- 73
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
V+ + + H L++ R + +L VP+ F ++ SPG++ GG +
Sbjct: 74 ------HVILKALQRHPYKPIVLHMDLQRVSSKDILVKLVPVHFINEEQSPGIKAGGIVQ 127
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL-----RSKDEPVCK 245
V+ C A +P +I+VD+S++ ++ + DLK+ ++L S D PV
Sbjct: 128 HTMTQVEIRCQAKDLPEFIEVDMSKVGMDDVVHLSDLKLPKGVQLTVDVTDGSHDAPVVS 187
Query: 246 IAGGRAS 252
I + S
Sbjct: 188 IHAAKVS 194
>gi|408675404|ref|YP_006875152.1| 50S ribosomal protein L25 [Emticicia oligotrophica DSM 17448]
gi|387857028|gb|AFK05125.1| 50S ribosomal protein L25 [Emticicia oligotrophica DSM 17448]
Length = 194
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 144 HLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPAD 203
H D + FL P+ ++K+ VP+ G S G +KGG L R ++ PA
Sbjct: 85 QFHPTNDQITHADFLEITPDKVIKVAVPIKLHGP--SEGQKKGGKLVQKMRKLRVQGPAQ 142
Query: 204 IVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRA 251
+P YI++D+ +LD+ + + G + +K+L + PV I+ RA
Sbjct: 143 HIPDYINIDIKDLDLGKSVKVGAITPIEGVKILEAASNPVAFISIPRA 190
>gi|52842858|ref|YP_096657.1| 50S ribosomal protein L25 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54295490|ref|YP_127905.1| 50S ribosomal protein L25 [Legionella pneumophila str. Lens]
gi|54298641|ref|YP_125010.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella
pneumophila str. Paris]
gi|378778547|ref|YP_005186986.1| 50S ribosomal protein L25, ribosomal 5S rRNA E-loop binding protein
[Legionella pneumophila subsp. pneumophila ATCC 43290]
gi|397665242|ref|YP_006506780.1| 50S ribosomal protein L25 (General stress protein CTC) [Legionella
pneumophila subsp. pneumophila]
gi|397668326|ref|YP_006509863.1| 50S ribosomal protein L25 (General stress protein CTC) [Legionella
pneumophila subsp. pneumophila]
gi|68053068|sp|Q5WTE8.1|RL25_LEGPL RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|68053069|sp|Q5X1N8.1|RL25_LEGPA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|68053082|sp|Q5ZS67.1|RL25_LEGPH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|52629969|gb|AAU28710.1| 50S ribosomal protein L25, ribosomal 5S rRNA E-loop binding protein
[Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|53752426|emb|CAH13858.1| hypothetical protein lpp2705 [Legionella pneumophila str. Paris]
gi|53755322|emb|CAH16818.1| hypothetical protein lpl2577 [Legionella pneumophila str. Lens]
gi|307611527|emb|CBX01204.1| hypothetical protein LPW_29031 [Legionella pneumophila 130b]
gi|364509363|gb|AEW52887.1| 50S ribosomal protein L25, ribosomal 5S rRNA E-loop binding protein
[Legionella pneumophila subsp. pneumophila ATCC 43290]
gi|395128653|emb|CCD06871.1| 50S ribosomal protein L25 (General stress protein CTC) [Legionella
pneumophila subsp. pneumophila]
gi|395131737|emb|CCD10030.1| 50S ribosomal protein L25 (General stress protein CTC) [Legionella
pneumophila subsp. pneumophila]
Length = 219
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 21/187 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R +VP++++ GG+K+ +++ + K++ L S +FD+ V +
Sbjct: 24 RLENKVPAVIY-------GGSKKPMAIHFSH-NKVIKALETESIYSSVFDITVDGKVE-- 73
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
V+ + + H L++ R + +L VP+ F ++ SPG++ GG +
Sbjct: 74 ------HVILKALQRHPYKPIVLHMDLQRVSSKDILVKLVPVHFINEEQSPGIKAGGIVQ 127
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL-----RSKDEPVCK 245
V+ C A +P +I+VD+S++ ++ + DLK+ ++L S D PV
Sbjct: 128 HTMTQVEIRCQAKDLPEFIEVDMSKVGMDDVVHLSDLKLPKGVQLTVDVADGSHDAPVVS 187
Query: 246 IAGGRAS 252
I + S
Sbjct: 188 IHAAKVS 194
>gi|82701724|ref|YP_411290.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosospira
multiformis ATCC 25196]
gi|109893371|sp|Q2YBH3.1|RL25_NITMU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|82409789|gb|ABB73898.1| LSU ribosomal protein L25P [Nitrosospira multiformis ATCC 25196]
Length = 228
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 20/198 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R G S + R +G+VP I++ GG ++ + L L
Sbjct: 5 ISAEKRELQGKGASRRLRGSGKVPGIIY-------GGENPAQPIELDH-NNLYHQLKLEA 56
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + + V + K +VL R + +H L++ F R + + VPL
Sbjct: 57 FHASILTMSVEGQ--------KEKVLLRDIQMHPFKPQVLHIDFQRVASNKKIHMKVPLH 108
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F +D++PG++ GG ++ + + C +P +I VD+ EL I +L++
Sbjct: 109 FINEDIAPGVKLAGGLVSHVLTELDVSCLPKDLPEFISVDVGELAAGNTIHLSNLQLPEG 168
Query: 233 LK---LLRSKDEPVCKIA 247
++ L++ +D PV IA
Sbjct: 169 VEIPALMKGEDLPVATIA 186
>gi|90022897|ref|YP_528724.1| 50S ribosomal protein L25/general stress protein Ctc
[Saccharophagus degradans 2-40]
gi|109893392|sp|Q21FL7.1|RL25_SACD2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|89952497|gb|ABD82512.1| LSU ribosomal protein L25P [Saccharophagus degradans 2-40]
Length = 210
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 19/150 (12%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+AG VP+IV+ GG K +V T +R+L HL F S + L + G
Sbjct: 26 REAGLVPAIVY-------GGRKNPQNV-TITLRELTKHLENEAFYSHIITLNI------G 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLR-KGGYL 189
D E+V + + + H T+ ++ FLR VPL F + S G++ +GG +
Sbjct: 72 DSSEQV--ILKDLQRHPATNFAMHADFLRVSKTKKFNTKVPLHFINEATSKGVKEQGGKV 129
Query: 190 NTIKRTVKFLC-PADIVPPYIDVDLSELDV 218
++ C PAD+ P +I+VDL+ +++
Sbjct: 130 QHSMTELEIACLPADL-PEFIEVDLANVEL 158
>gi|325270437|ref|ZP_08137041.1| 50S ribosomal protein L25 [Prevotella multiformis DSM 16608]
gi|324987233|gb|EGC19212.1| 50S ribosomal protein L25 [Prevotella multiformis DSM 16608]
Length = 202
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 141 RKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLC 200
+++ H TDA L++ F + + I VP+ G ++ G+R GG +N R +
Sbjct: 80 KELQFHPVTDALLHIDFYEVNDQKPITIGVPVKLSG--LAQGVRDGGRMNMSIRKINVKA 137
Query: 201 PADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRASDQ 254
P +P ++D+D++ L + + I G+L L+L+ K+ VC I R S Q
Sbjct: 138 PYQQIPEHLDIDVTGLQLGKSIKVGELSFE-GLELVTPKEVVVCSIKATRNSIQ 190
>gi|264676949|ref|YP_003276855.1| ribosomal 5S rRNA E-loop binding protein [Comamonas testosteroni
CNB-2]
gi|262207461|gb|ACY31559.1| ribosomal 5S rRNA E-loop binding protein [Comamonas testosteroni
CNB-2]
Length = 207
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
+A RA GT S + R +G+ P IV+ G +LI + N + V +
Sbjct: 3 FVATERAKQGTGASRRLRLSGKTPGIVYG------AGEAQLIEIDHNALWHAVH---KEA 53
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + D+E+ + +V+ R V H ++ F R L ++VPL
Sbjct: 54 FHSSILDMEINGQV--------TKVVLRDVQFHPYKKLVQHIDFQRVDGNTKLHMNVPLH 105
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSEL 216
F G SP ++ + + + ++ +C +P +I VDLS L
Sbjct: 106 FEGTAESPAVKVENCTVTPLMHELQVICEPANLPEFIKVDLSAL 149
>gi|345883747|ref|ZP_08835176.1| 50S ribosomal protein L25, Ctc-form [Prevotella sp. C561]
gi|345043406|gb|EGW47475.1| 50S ribosomal protein L25, Ctc-form [Prevotella sp. C561]
Length = 200
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 16/194 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G + S + RK G +P ++ + + +++RKLV + + V +
Sbjct: 11 RTDLGKKASKQLRKEGLIPCNLYGEAQQDSKPVAFSFTAPMSELRKLV-YTPHIYVVELV 69
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
D E + + +++ H TDA L+V F + + I VP+ G
Sbjct: 70 IDGERHT------------AVLKELQFHPVTDALLHVDFYEVNDQKPITIGVPVKLVG-- 115
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
++ G+R GG +N R + P +P ++D++++EL + + I G+L L+L+
Sbjct: 116 LAQGVRDGGRMNLSIRKINVKAPYQQIPEHLDINVTELRLGKSIKVGELSFE-GLELVTP 174
Query: 239 KDEPVCKIAGGRAS 252
K+ VC I R S
Sbjct: 175 KEVVVCSIKATRNS 188
>gi|260574076|ref|ZP_05842081.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacter
sp. SW2]
gi|259023542|gb|EEW26833.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacter
sp. SW2]
Length = 203
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G + + R+ G VP IV+ G + I+V+ + K L F+ L
Sbjct: 13 RMGTGKGAARQARREGYVPGIVYGD-----GKEPQAINVKYYTLLK---RLKAGRFLQTL 64
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
F+L++ + + VRV+ R V D P +V F+R + + + + + F +
Sbjct: 65 FNLKIEGQ-------DDVRVICRGVQRDVVKDLPTHVDFMRLHQASRVNLFIHVTFINHE 117
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
SPGL++GG L ++ V+ A +P +I VDL+
Sbjct: 118 ASPGLKRGGALVVVRPEVELEVTAGDIPDHITVDLA 153
>gi|319891454|ref|YP_004148329.1| 50S ribosomal protein L25p [Staphylococcus pseudintermedius
HKU10-03]
gi|386320205|ref|YP_006016368.1| 50S ribosomal protein L25 [Staphylococcus pseudintermedius ED99]
gi|317161150|gb|ADV04693.1| LSU ribosomal protein L25p [Staphylococcus pseudintermedius
HKU10-03]
gi|323465376|gb|ADX77529.1| ribosomal protein L25 [Staphylococcus pseudintermedius ED99]
Length = 216
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 85/180 (47%), Gaps = 23/180 (12%)
Query: 69 KERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIR--KLVGHLGRSFFVSRLFDLEVRSE 126
K R+AG+VP++V+ G + +SV+ +++ KL+ +GR+ + E
Sbjct: 20 KIREAGKVPAVVY-------GYGTKNVSVKVDEVEFIKLIREVGRNGVI----------E 62
Query: 127 FGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKG 186
G G ++++V+ S + ++ FL ++VP+ G+ +PG ++G
Sbjct: 63 LGVGS--KQIKVMVSDYQYDSLKNQITHIDFLAINMTEERTVEVPVHLIGE--APGAKEG 118
Query: 187 GYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
G + ++ D +P YI+VD+SEL++ + D+KV + ++ + +
Sbjct: 119 GVVEQPLFNLEITATPDSIPEYIEVDISELNINDSLSVADVKVSGDFTIENEAEDTIVSV 178
>gi|425471577|ref|ZP_18850429.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 9701]
gi|389882518|emb|CCI37023.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 9701]
Length = 185
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P++++ G +G + V L L ++ + L D+ V +G
Sbjct: 20 RRQGLIPAVLY----GHNGTESVSLVVPEKAALTL---LKKASVNNTLVDVNVPEMPWTG 72
Query: 131 D-LIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYL 189
LI++V+ P K +L+ +++F L I VP+ G+ + G ++GG +
Sbjct: 73 KALIQEVQSHPWKRNLY-------HLSFFSVSAHGKLDIVVPIKAMGEAI--GTKQGGLI 123
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEP 242
V C AD +P I+ D+SE+ V Q +L GDLK+ + L KD+P
Sbjct: 124 EQFVNEVNVSCTADNIPEVIEFDVSEIGVGQSLLVGDLKMPEGVTL---KDDP 173
>gi|390444015|ref|ZP_10231799.1| 50S ribosomal protein L25/general stress protein Ctc [Nitritalea
halalkaliphila LW7]
gi|389665454|gb|EIM76921.1| 50S ribosomal protein L25/general stress protein Ctc [Nitritalea
halalkaliphila LW7]
Length = 191
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K++ L + H ++ L+ FL + +K+D+P+ G SPG++KGG L
Sbjct: 69 QKIKALLKDTQFHPVSEVLLHADFLAFSEDRPVKMDIPVNIVGS--SPGIQKGGKLEIKA 126
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRASD 253
RT+K A +P I+VD+S LD+ + + +L V ++L S + + I RA
Sbjct: 127 RTLKVKGLASNLPDKINVDISHLDLGKSVKVSELSVE-GFEILTSPNVSIATIGIPRALR 185
Query: 254 QKKS 257
KKS
Sbjct: 186 GKKS 189
>gi|221068918|ref|ZP_03545023.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Comamonas
testosteroni KF-1]
gi|220713941|gb|EED69309.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Comamonas
testosteroni KF-1]
Length = 207
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
+A RA GT S + R +G+ P IV+ G +LI + N + V +
Sbjct: 3 FVATERAKQGTGASRRLRLSGKTPGIVYG------AGEAQLIEIDHNALWHAVH---KEA 53
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + D+EV + +V+ R V H ++ F R L ++VPL
Sbjct: 54 FHSSVLDMEVNGQV--------TKVVLRDVQFHPYKKLVQHIDFQRVDGNTKLHMNVPLH 105
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSEL 216
F G SP ++ + + + ++ +C +P +I VDLS L
Sbjct: 106 FEGAAESPAVKVENCTVTPLMHELQVICEPANLPEFIKVDLSAL 149
>gi|372281610|ref|ZP_09517646.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanicola
sp. S124]
Length = 179
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 15/172 (8%)
Query: 76 VPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEK 135
VP +V+ GG+ I+++ L+ L F++ LF+L+V E
Sbjct: 2 VPGVVY-------GGDADPIAIEIG-FNDLLKRLKAGRFLATLFNLKVEGH-------ED 46
Query: 136 VRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRT 195
VRV+ R V D P +V F+R + + +P+ F +PGL+KGG L ++
Sbjct: 47 VRVICRGVQRDVVKDLPTHVDFMRLRRTTRVNLHIPVEFINHAAAPGLKKGGVLTVVRAD 106
Query: 196 VKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA 247
V A +P +I VDL+ + I + + +K + +D + I
Sbjct: 107 VDLSVIAGDIPDHITVDLTGKQIGDTITISQVTLPEGVKPVIERDFVIANIT 158
>gi|21230347|ref|NP_636264.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66769659|ref|YP_244421.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris
str. 8004]
gi|71153677|sp|Q8PC62.1|RL25_XANCP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|81304386|sp|Q4URC2.1|RL25_XANC8 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|21111900|gb|AAM40188.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66574991|gb|AAY50401.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris
str. 8004]
Length = 209
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G S + R AG +P+IV+ GG +S+Q N + + F+ S +
Sbjct: 12 RADEGKGASRRLRHAGVIPAIVY-------GGELEPVSIQLNHEQIWLAQQNEWFY-SSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
DL + +GD+ +VL R + H +++ F R L VPL F +
Sbjct: 64 LDLNL-----NGDV---QQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSASVPLHFINEA 115
Query: 179 VSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDV 218
+SP + + T + V+ +C +P +I++DLS L+V
Sbjct: 116 ISPAGKSSEVVVTHELNEVQVVCLPKDLPEFIEIDLSTLEV 156
>gi|119897045|ref|YP_932258.1| 50S ribosomal protein L25/general stress protein Ctc [Azoarcus sp.
BH72]
gi|166223661|sp|A1K3G6.1|RL25_AZOSB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|119669458|emb|CAL93371.1| 50S ribosomal protein L25 [Azoarcus sp. BH72]
Length = 200
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 21/177 (11%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R G+ S + R+A +VP I++ G + + I++ N++ L L + F
Sbjct: 7 ATKREGQGSSASRRLRRAAQVPGIIYGA-----GKDAQPITLDHNELYHL---LKKEAFH 58
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + + V K V+ R H+ L++ F R L + VPL F
Sbjct: 59 ASVLSINVEGA--------KETVVLRDTQWHAYKQQVLHIDFQRVDASQKLHLKVPLHFV 110
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFL---CPADIVPPYIDVDLSELDVEQKILAGDLKV 229
D +P ++ GG N I + L C +P +I+VDL+ L+ Q I LK+
Sbjct: 111 NGDNAPAVKLGG--NIIAHVMTELDVQCLPSSLPEFIEVDLAALEAGQSIHVSQLKL 165
>gi|391228936|ref|ZP_10265142.1| ribosomal protein L25, Ctc-form [Opitutaceae bacterium TAV1]
gi|391218597|gb|EIP97017.1| ribosomal protein L25, Ctc-form [Opitutaceae bacterium TAV1]
Length = 238
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 20/188 (10%)
Query: 51 DETILAI-PRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHL 109
++ IL + PRA G S + RKA ++P+I++ G+H + L +V + +L+ L
Sbjct: 4 EQHILTVTPRAQTGRSASRRVRKANQIPAILY----GKHTSPQTL-AVDAPEFTRLLKSL 58
Query: 110 -GRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
GRS + E D EK ++V TD L+V + + I
Sbjct: 59 AGRSLII----------ELVRKDQDEKALSFLQEVQRDPITDRFLHVDLQEVKADEKMDI 108
Query: 169 DVPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
+VP+ G+ S G++ + G L+ T++ C +PP I+VD++EL + I G++
Sbjct: 109 NVPVTLTGE--SFGVKNQNGVLDINAHTLRVRCLPKDLPPQIEVDVTELKAGESIKVGNI 166
Query: 228 KVHPALKL 235
K ++L
Sbjct: 167 KAPAGVEL 174
>gi|149925764|ref|ZP_01914028.1| 50S ribosomal protein L25/general stress protein Ctc [Limnobacter
sp. MED105]
gi|149825881|gb|EDM85089.1| 50S ribosomal protein L25/general stress protein Ctc [Limnobacter
sp. MED105]
Length = 195
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
++A R G+ S + R+AG+VP IV+ G N+ + +S++ N L L +
Sbjct: 3 VVATSRTEQGSGASRRLRRAGQVPGIVY-------GANQEAQAVSIEHN---PLWHALQK 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + DLE+ + +VL R H L++ F R + ++VP
Sbjct: 53 EKFHSSILDLEIDG--------KSQQVLLRDYQSHPYKPQLLHIDFQRIDGNQKIHMNVP 104
Query: 172 LVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQK 221
L F G SP ++ G + + ++ C +P +I VD S LDV ++
Sbjct: 105 LHFSGHLESPAVKLYAGQVTFVANQIEIECLPKDLPEFIAVDCSVLDVTKR 155
>gi|260591411|ref|ZP_05856869.1| ribosomal protein L25, Ctc-form [Prevotella veroralis F0319]
gi|260536603|gb|EEX19220.1| ribosomal protein L25, Ctc-form [Prevotella veroralis F0319]
Length = 200
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 20/198 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTN--QIRKLVGHLGRSFFVS 116
R G + S + RK G VP ++ + Q G +S + ++RKLV + + V
Sbjct: 11 RTDLGKKASKQLRKEGLVPCNLYG--EAQKDGKPLALSFTASMAELRKLV-YTPHIYVVE 67
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
+ D E + + +++ H TDA L+V F + + + VP+ G
Sbjct: 68 LVIDGERHT------------AVLKELQFHPVTDALLHVDFYEVNDQKPIVMGVPVKLVG 115
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
++ G+R GG +N R + P +P ++D+D++ L + + I G L L+L+
Sbjct: 116 --LAQGVRDGGRMNMSIRKINVKAPYQQIPEHLDIDVTNLHLGKSIKVGQLSFE-GLELV 172
Query: 237 RSKDEPVCKIAGGRASDQ 254
K+ VC I R S Q
Sbjct: 173 TPKEVVVCSIKATRNSIQ 190
>gi|299531512|ref|ZP_07044918.1| 50S ribosomal protein L25/general stress protein Ctc [Comamonas
testosteroni S44]
gi|298720475|gb|EFI61426.1| 50S ribosomal protein L25/general stress protein Ctc [Comamonas
testosteroni S44]
Length = 207
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
+A RA GT S + R +G+ P IV+ G +LI + N + V +
Sbjct: 3 FVATERAKQGTGASRRLRLSGKTPGIVYG------AGEAQLIEIDHNALWHAVH---KEA 53
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + D+E+ + +V+ R V H ++ F R L ++VPL
Sbjct: 54 FHSSILDMEINGQV--------TKVVLRDVQFHPYKKLVQHIDFQRVDGNTKLHMNVPLH 105
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSEL 216
F G SP ++ + + + ++ +C +P +I VDLS L
Sbjct: 106 FEGAAESPAVKVENCTVTPLMHELQVICEPANLPEFIKVDLSAL 149
>gi|238028669|ref|YP_002912900.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
glumae BGR1]
gi|237877863|gb|ACR30196.1| 50S ribosomal protein L25 [Burkholderia glumae BGR1]
Length = 204
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 86/206 (41%), Gaps = 22/206 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R G+ IV+ E ++I + N + L +
Sbjct: 3 VVAFERTQQGTGASRRLRNTGKTTGIVYGGE-----AAPQMIELDHNALWHA---LKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + S VL R V H L+V F R L VP+
Sbjct: 55 FHSSILDLEVAGKSQS--------VLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPVH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F +VSP ++ ++ + + C +P +++VDLS+L+ Q + A D+ +
Sbjct: 107 FLNAEVSPAVKLSSAVVSHVITELDVECLPSALPEFLEVDLSKLEAGQSVHAKDITLPNG 166
Query: 233 LKLLRSKD--EPVCKIA---GGRASD 253
+ L+ D PV A G SD
Sbjct: 167 VALVAHIDAENPVIATATIPAGAVSD 192
>gi|451936226|ref|YP_007460080.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777149|gb|AGF48124.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 205
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A+ R GT S + R G VP+I++ GG+ ++++ + ++ L +
Sbjct: 3 INALLRDMHGTSASRRLRHVGGVPAIIY-------GGSSLPMTIELDH-NEIYHALRKEK 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + ++++ + + +V+ R V H L++ F R + VPL
Sbjct: 55 FHSSILNIKINGK-------DAEQVILRSVQWHPYKQQVLHIDFQRVESNQEISTRVPLH 107
Query: 174 FRGDDVSPGLRKGG-YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F +D+SP ++ GG + + + C ++P +I+VDLS + + + D+K+
Sbjct: 108 FLNEDISPAVKIGGAIIRHVITELDITCMPALLPQFINVDLSGVSLGDSVHLSDVKL 164
>gi|436843123|ref|YP_007327501.1| 50S ribosomal protein L25 [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432172029|emb|CCO25402.1| 50S ribosomal protein L25 [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 197
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T A R G + + R G +P++ + QE G++ I++ N+I + R+
Sbjct: 6 TFKAEVRTKTGKCANRQLRNTGMIPAVFYSQE-GEN------ITLSVNEID--FAKMFRT 56
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+RLF L++ + L+ KV++ P + ++ ++ FL + LKI+VP+
Sbjct: 57 TGTTRLFSLDIDGK-TYDTLVWKVQMDPVRPRVN-------HIDFLGVAKDKPLKIEVPV 108
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
G ++PG++ GG + + + C A +P I +++S ++V + ++++
Sbjct: 109 TTEG--LAPGVKLGGRMAIYRDKLTVACTAATIPAAIVINVSNMNVGDTVFVNEVELGEG 166
Query: 233 LKLLRSKDEPVCKIAGGR 250
++ + + + A GR
Sbjct: 167 ASIIFDSNFALVRCAAGR 184
>gi|428319716|ref|YP_007117598.1| 50S ribosomal protein L25 [Oscillatoria nigro-viridis PCC 7112]
gi|428243396|gb|AFZ09182.1| 50S ribosomal protein L25 [Oscillatoria nigro-viridis PCC 7112]
Length = 201
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSR-LFDLEVRSEFGS 129
R++G +P++++ G+K S+ K V HL + V+ L DL + S
Sbjct: 20 RRSGLIPAVLY--------GHKGSESISLTIKAKTVEHLLKKHAVNNTLIDLSIPDLSWS 71
Query: 130 GDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYL 189
G + L R+V +H P +++F + L++++ L F G+ V L +GG L
Sbjct: 72 G------KTLLREVQVHPWKGYPYHLSFFSVATQDSLEVELSLNFVGEAVGVKL-EGGIL 124
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGG 249
+T+ + C D +P I+VD+S L V + +L + + L D+ V + G
Sbjct: 125 DTVLTQLAVKCKPDSIPEGIEVDISNLKVGDALHIHELVLPAGVVALGEPDQVVVTVLGI 184
Query: 250 RA 251
+A
Sbjct: 185 QA 186
>gi|429726462|ref|ZP_19261259.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 473 str.
F0040]
gi|429146538|gb|EKX89590.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 473 str.
F0040]
Length = 202
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 93/199 (46%), Gaps = 17/199 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGR 111
+I RA G + + + RK G VP +++ ++ +G + + V QI K+V
Sbjct: 5 SITGTKRADLGKKATKEVRKQGLVPCVIYGEKKDANGAPEAIHFLVDEKQINKVV----- 59
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
+ ++ + + + + + + +++ H+ D L+V F + P + + VP
Sbjct: 60 --YTPEIYLVNINLDG------QDCQAVVKEIQFHAVKDNVLHVDFYQVNPTKPIVMGVP 111
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
+ G ++ G+R GG L T+ R +K D +P + +D++ L + + I GDL +
Sbjct: 112 IAPTG--LAEGVRAGGKLVTMVRKLKVRATVDAIPEKLTIDVTSLGLGKSIKCGDLS-YE 168
Query: 232 ALKLLRSKDEPVCKIAGGR 250
L+L+ K+ V + R
Sbjct: 169 GLELVTPKEVVVVTVKMTR 187
>gi|325983634|ref|YP_004296036.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosomonas
sp. AL212]
gi|325533153|gb|ADZ27874.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosomonas
sp. AL212]
Length = 206
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 19/176 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R G S + R +G+VP++++ GG++ S++ + L L
Sbjct: 5 ISADKRTLQGKGASRRLRGSGKVPAVIY-------GGDQAAQSIEMDH-NDLFHKLKLEA 56
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + L V + K VL R V +H L+V F R + + VPL
Sbjct: 57 FHASILTLSVAGK--------KEPVLLRDVQMHPFKKQVLHVDFQRVDKNKKIHMKVPLH 108
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
F ++SPG++ GG + I V C P D+ P +I VDL+EL + DL
Sbjct: 109 FINAEISPGVKTSGGIVTHILTEVDITCLPGDL-PEFISVDLAELTAGHTLHLSDL 163
>gi|310815223|ref|YP_003963187.1| 50S ribosomal protein L25 [Ketogulonicigenium vulgare Y25]
gi|385232765|ref|YP_005794107.1| 50S ribosomal protein L25 [Ketogulonicigenium vulgare WSH-001]
gi|308753958|gb|ADO41887.1| 50S ribosomal protein L25/general stress protein Ctc
[Ketogulonicigenium vulgare Y25]
gi|343461676|gb|AEM40111.1| 50S ribosomal protein L25 [Ketogulonicigenium vulgare WSH-001]
Length = 155
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F+S L DL V + RV+ R V H D P +V FLR P +K+ +P+
Sbjct: 15 FLSTLIDLNVDGK--------TERVVCRGVQRHVVKDLPTHVDFLRLAPTTRVKLHIPVH 66
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
F + +PG++ GG + ++ ++ A+ +P ++ VDL+
Sbjct: 67 FENEAAAPGVKLGGTVVHVRSEIELEVTANDIPEFVTVDLT 107
>gi|374263609|ref|ZP_09622157.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella
drancourtii LLAP12]
gi|363536199|gb|EHL29645.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella
drancourtii LLAP12]
Length = 220
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 21/187 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R +VP++++ GG K+ +S+ Q K++ L S +FD+ + +
Sbjct: 24 RLENKVPAVIY-------GGEKKPMSIHF-QHNKVIKALETESIYSSVFDITIDGKVE-- 73
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
V+ + + H +++ R + +L VPL F + +PG++ GG +N
Sbjct: 74 ------HVILKALQRHPYKPLVMHMDLQRVSKKDVLVKLVPLHFVNEQQAPGIKAGGMIN 127
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK----VHPALKLL-RSKDEPVCK 245
++ C A +P +I+VD++++ ++ I +LK VH + L S D PV
Sbjct: 128 HTMTQIEIRCQAKDLPEFIEVDMAKVALDDVIHLSNLKLPKGVHLTVDLADHSHDSPVVS 187
Query: 246 IAGGRAS 252
I R S
Sbjct: 188 IHMPRVS 194
>gi|408374420|ref|ZP_11172107.1| 50S ribosomal protein L25/general stress protein Ctc [Alcanivorax
hongdengensis A-11-3]
gi|407765695|gb|EKF74145.1| 50S ribosomal protein L25/general stress protein Ctc [Alcanivorax
hongdengensis A-11-3]
Length = 213
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 75 RVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIE 134
RVP I++ E ++ISV+ +++K L F S + L++
Sbjct: 29 RVPGILYGGE-----AEPQMISVELRELKKA---LETEAFYSHVLTLKLDGA-------- 72
Query: 135 KVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK-GGYLNTIK 193
V+ + R + H P +V FLR + + VPL F + S G++K GG +
Sbjct: 73 DVQAVLRDMQRHPAKGHPTHVDFLRVDKTHKITMQVPLHFINEAGSVGVKKQGGEIQHNI 132
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPALKLLRSKDEPVCKI 246
V+ C +P YI+VD++ +++ Q + DLK+ P L L D+PV I
Sbjct: 133 SEVEVSCLPQNLPEYIEVDMAAVELNQVVHLSDLKLPKGVELPQLALGEDHDQPVVAI 190
>gi|399154425|ref|ZP_10754492.1| 50S ribosomal protein L25/general stress protein Ctc [gamma
proteobacterium SCGC AAA007-O20]
Length = 239
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLG 110
T+ A+ R G S + RK +VPSIV+ GGNK +IS+ ++I L L
Sbjct: 4 TVNALVREDQGKGASRRLRKEEKVPSIVY-------GGNKAPLMISLNIHEITHL---LE 53
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
+ + DL V K V+ + + H ++ +V FLR + L
Sbjct: 54 DEDTFTSVLDLVVDKS--------KEPVVIKDIQRHPAKNSIFHVDFLRIDEKHALITTT 105
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
PL F G + + +R G LN ++ C +P IDVD+S L++ + DL
Sbjct: 106 PLHFIGTEDNEAIRIGNMLNQFVVAIEISCLPKDLPHGIDVDVSGLELGDHLTLTDL 162
>gi|410471584|ref|YP_006894865.1| 50S ribosomal protein L25 [Bordetella parapertussis Bpp5]
gi|408441694|emb|CCJ48181.1| 50S ribosomal protein L25 [Bordetella parapertussis Bpp5]
Length = 204
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ G+ S + R+AGRVP+IV+ GG ++++ + ++ L + F
Sbjct: 5 ATARSVQGSSASRRLRRAGRVPAIVY-------GGTAAPLNIELDH-NEIYHALRKEEFH 56
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + ++ ++ G E+VR+ R + H+ ++V F R L VPL F
Sbjct: 57 ASILNMVLK-----GGKTEEVRL--RSIQWHAYKPQVMHVDFQRVDANQALHTKVPLHFV 109
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+VSP ++ G ++ + + C ++P +I+V+L +L I D+K+
Sbjct: 110 NAEVSPAVKLSGAIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLADIKL 164
>gi|384921612|ref|ZP_10021587.1| 50S ribosomal protein L25/general stress protein Ctc [Citreicella
sp. 357]
gi|384464518|gb|EIE49088.1| 50S ribosomal protein L25/general stress protein Ctc [Citreicella
sp. 357]
Length = 205
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 57 IPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVS 116
+ R+ G + + R+ G VP I+F GG +++Q L+ L F S
Sbjct: 11 LERSGTGKGAARQARRDGMVPGILF-------GGEGDPLAIQM-PFNVLLKRLKAGRFKS 62
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
LF+L++ + + VRV+ R V D P + +R + + + + + F
Sbjct: 63 TLFNLKMEGK-------DDVRVICRDVQRDVVKDLPTHFDLMRLRRTSRIALYIHVDFIN 115
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
+D +PG++KGG L +++ V+ A +P +I VDL D+ I D+
Sbjct: 116 EDKAPGIKKGGVLTIVRQEVELNVLAGDIPDHITVDLEGKDIGDVIHISDV 166
>gi|288799717|ref|ZP_06405176.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332965|gb|EFC71444.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 299 str.
F0039]
Length = 199
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 20/194 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVF--EQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVS 116
R+ G + S RK G +P ++ DG+ +V ++RKL+ + + V+
Sbjct: 11 RSDLGKKASKSLRKEGLIPCNMYGIATTDGKPSAFS--FTVPMTELRKLI-YTPHIYLVN 67
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
D ++ + + +++ H TD+ L+V FL E + I +P+ G
Sbjct: 68 LTVDGKLHT------------AILKEIQFHPVTDSVLHVDFLEVNEEKPITIGLPVKLVG 115
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
++ G+R GG ++ R + P +P ++DVD++ L + + I G L + L+L+
Sbjct: 116 --LAQGIRDGGRMSLSLRKLNVKAPYKSLPEHLDVDVTALTIGKSIKVGQLS-YEGLELV 172
Query: 237 RSKDEPVCKIAGGR 250
KD VC I R
Sbjct: 173 TGKDVVVCSIKMTR 186
>gi|428169016|gb|EKX37954.1| hypothetical protein GUITHDRAFT_165347 [Guillardia theta CCMP2712]
Length = 294
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G VP ++ + E G + + + ++ L +LFD+ +
Sbjct: 118 RRDGFVPGVIQDCE-----GKRTYVKIDEKCLQPWPNKLNAG---CKLFDVRIEG----- 164
Query: 131 DLIEKVRVLPRKVHLHS-GTDAPLNVTFLRAPPEALLKI--DVPLVFRGDDVSPGLRKGG 187
+E ++ R +H + D +V L+ PE ++ D+P V + SPGLR+GG
Sbjct: 165 --LEPMKCFMRNLHYDTVFEDVIYDVLLLKFEPEKGQQVLLDIPFVSVNTERSPGLRRGG 222
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
LN VK +C + VP I+VD+ ++V KI + K
Sbjct: 223 LLNISMTKVKVICTSYDVPDKIEVDVGWMEVGDKIFVKNFK 263
>gi|402494969|ref|ZP_10841704.1| 50S ribosomal protein L25/general stress protein Ctc [Aquimarina
agarilytica ZC1]
Length = 200
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 21/198 (10%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI A R S G + + R AG VP +V+ + H + N KLV
Sbjct: 5 TINASQRESLGKKATKALRNAGNVPCVVYGGDTVTH------FTAHENMFSKLV------ 52
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ +V + + D + + + + H TD L++ F++ + + +++P+
Sbjct: 53 ------YTPDVHTVVIALDNGTNINAILQDIQFHPTTDKILHIDFVQIFDDKAITMEIPV 106
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
G SPG+ GG L R +K A +P I D+SEL + K+ L
Sbjct: 107 RTTGK--SPGVANGGNLKFNARRLKVKGLAANLPDEIKADISELKIGNKLYVTQLD-SEG 163
Query: 233 LKLLRSKDEPVCKIAGGR 250
+ L + + VC++ R
Sbjct: 164 FEFLHADNTVVCQVKNSR 181
>gi|282858294|ref|ZP_06267479.1| ribosomal protein L25, Ctc-form [Prevotella bivia JCVIHMP010]
gi|424900446|ref|ZP_18323988.1| ribosomal protein L25, Ctc-form [Prevotella bivia DSM 20514]
gi|282588925|gb|EFB94045.1| ribosomal protein L25, Ctc-form [Prevotella bivia JCVIHMP010]
gi|388592646|gb|EIM32885.1| ribosomal protein L25, Ctc-form [Prevotella bivia DSM 20514]
Length = 197
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
EK + + + H TDA L+V F E + + VP+ G ++ G+R GG +N
Sbjct: 73 EKHLAIMKDLQFHPTTDALLHVDFYEVTEEKEIIMGVPVKLAG--LAQGVRDGGRMNMSI 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRAS 252
R + P + +P ++ +D++ L + + I G L L+L+ K+ VC I R S
Sbjct: 131 RKINVKAPFNKIPEFLSIDVTALQLGKAIKVGQLSFE-GLELVTPKEVVVCSIKATRNS 188
>gi|270159183|ref|ZP_06187839.1| 50S ribosomal protein L25 [Legionella longbeachae D-4968]
gi|289165989|ref|YP_003456127.1| 50S ribosomal protein L25 [Legionella longbeachae NSW150]
gi|269987522|gb|EEZ93777.1| 50S ribosomal protein L25 [Legionella longbeachae D-4968]
gi|288859162|emb|CBJ13091.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella
longbeachae NSW150]
Length = 218
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 21/187 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R +VP++++ GG+K+ S+ Q K++ L S +FD+ V +
Sbjct: 24 RLENQVPAVIY-------GGDKKPTSIHF-QHNKVIKALETESIYSSVFDITVDGKVE-- 73
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
V+ + + H +++ R +L VP+ F ++ +PG++ GG +N
Sbjct: 74 ------HVILKALQRHPYKPVVMHMDLQRVSKTDVLVKLVPIHFINEEKAPGIKAGGIIN 127
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR-----SKDEPVCK 245
V+ C A +P +I+VD+SE+ V+ + LK+ ++L S D PV
Sbjct: 128 HTMTQVEVRCQAKDLPEFINVDMSEVKVDDIVHLSHLKLPKGVQLTVDVTDGSHDAPVVS 187
Query: 246 IAGGRAS 252
I + S
Sbjct: 188 IHMPKVS 194
>gi|428204194|ref|YP_007082783.1| 50S ribosomal protein L25 [Pleurocapsa sp. PCC 7327]
gi|427981626|gb|AFY79226.1| ribosomal protein L25, Ctc-form [Pleurocapsa sp. PCC 7327]
Length = 201
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P+ ++ G G +++ L L R+F + L DL++
Sbjct: 20 RRQGLIPAALY----GHQGAESVSLTINEKDAYFL---LRRAFVNNTLVDLQIP------ 66
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
DL +VL R+V H +++F A +++ VPL GD +PG+++GG L
Sbjct: 67 DLPWNGKVLIREVQAHPWKKTLYHLSFFSVAAHASIEVTVPLNPVGD--APGVKQGGILE 124
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+ + C D +P I++D+S L + + +L +
Sbjct: 125 QMLTELTVECAPDRIPASIEIDISNLYIGDSVQVSELAL 163
>gi|411119184|ref|ZP_11391564.1| LSU ribosomal protein L25P [Oscillatoriales cyanobacterium JSC-12]
gi|410711047|gb|EKQ68554.1| LSU ribosomal protein L25P [Oscillatoriales cyanobacterium JSC-12]
Length = 187
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 88/183 (48%), Gaps = 16/183 (8%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R++G++P++++ H G++ L V + +L+ L ++ + L + + + +G
Sbjct: 20 RRSGKLPAVLY-----GHNGDESLSLVLDAKEAELL--LRKASINNSLIQVNIPDKSWNG 72
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLR-KGGYL 189
+ L R+V H P +++F L++DVPL F G + G++ GG L
Sbjct: 73 ------KALLREVQTHPWRGTPYHISFFAVAAHGSLEVDVPLHFVG--TAKGIKVGGGSL 124
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGG 249
+ ++ C A+ +P I+VD+S+LDV + + L + +++L V + G
Sbjct: 125 DPSMSSLHVKCVAEKIPDQIEVDVSDLDVGESLQVSQLTLPEGIEVLNDPGRVVVSVLPG 184
Query: 250 RAS 252
S
Sbjct: 185 GGS 187
>gi|166364701|ref|YP_001656974.1| 50S ribosomal protein L25/general stress protein Ctc [Microcystis
aeruginosa NIES-843]
gi|189042362|sp|B0JXF5.1|RL25_MICAN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166087074|dbj|BAG01782.1| 50S ribosomal protein L25 [Microcystis aeruginosa NIES-843]
Length = 185
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 32/179 (17%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGH------LGRSFFVSRLFDLEVR 124
R+ G +P++++ G +G T I +VG L ++ + L D+ V
Sbjct: 20 RRQGLIPAVLY----GHNG---------TESISLVVGEKAALTLLKKASVNNTLVDVNVP 66
Query: 125 SEFGSGD-LIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGL 183
+G LI++V+ P K +L+ +++F L I VP+ G+ + G
Sbjct: 67 EMPWTGKALIQEVQSHPWKRNLY-------HLSFFSVSAHGKLDIVVPIKAIGEAI--GT 117
Query: 184 RKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEP 242
++GG + V C AD +P I+ D+SE+ V Q +L GDLK+ + L KD+P
Sbjct: 118 KQGGLIEQFVNEVNVSCIADNIPEVIEFDVSEIGVGQSLLVGDLKMPEGVTL---KDDP 173
>gi|389795955|ref|ZP_10199061.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
fulvus Jip2]
gi|388430005|gb|EIL87219.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
fulvus Jip2]
Length = 227
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R G S + R+A VP++V+ GG++ S+Q L+ SF
Sbjct: 7 IKAQSRKDEGKGASRRLRRAAYVPAVVY-------GGDQAPESIQIEHNTILLAAKNESF 59
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DL V + +VL R H +++ FLR A L+ +VPL
Sbjct: 60 F-SSVLDLNVDGKVQ--------KVLVRDWQKHPFKQLMMHMDFLRIDENAKLRANVPLH 110
Query: 174 FRGDDVSPGLRKGGYLNTIKRT-VKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV--- 229
F + SP + G + + T V+ C +P +I++DL ++ I LK+
Sbjct: 111 FLNQETSPAGKMSGVVISHNLTEVEVSCLPKDLPAFIELDLGAVEAGDIIHLSQLKLPAN 170
Query: 230 --HPALKLLRSKDEPVCKIAGGRAS 252
PAL L + D V + + S
Sbjct: 171 VELPALALGEAHDAAVVTVNAVKES 195
>gi|381153148|ref|ZP_09865017.1| ribosomal protein L25, Ctc-form [Methylomicrobium album BG8]
gi|380885120|gb|EIC30997.1| ribosomal protein L25, Ctc-form [Methylomicrobium album BG8]
Length = 200
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 55 LAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGRS 112
+A R G + R+ G VP++++ GG++ +++ + N++ K HL
Sbjct: 8 VAQARGRSGKNAARGTRRQGNVPAVIY-------GGHQEPQMLVLNHNEVIK---HLEHE 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
S + D+ + + +++ V+ P K + +++ F+R +K+ VPL
Sbjct: 58 AVYSHILDVTIDGKTEKA-VLKGVQRNPAKFQI-------MHLDFMRVSMSEAIKVHVPL 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F + S G +KGG V+ C +P +I+VDL+ LD+ I DL +
Sbjct: 110 HFVNESTSVGGKKGGVAAHSLVDVEVSCLPGALPEFIEVDLANLDIGASIHLSDLVLPAG 169
Query: 233 LKLLR-----SKDEPVCKIAGGRASDQKKS 257
++++ D PV + G+ + +
Sbjct: 170 IEIVALVQGPEHDLPVVSMMPGKTGQDESA 199
>gi|434393872|ref|YP_007128819.1| LSU ribosomal protein L25P [Gloeocapsa sp. PCC 7428]
gi|428265713|gb|AFZ31659.1| LSU ribosomal protein L25P [Gloeocapsa sp. PCC 7428]
Length = 223
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 88/177 (49%), Gaps = 16/177 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R++G +P+ ++ G +G ++++ + L L ++ + L L +
Sbjct: 20 RRSGLIPANLY----GHNGTESIHLTLEAKTVETL---LKQASVNNTLIQLNI------S 66
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLR-KGGYL 189
DL + + L R+V H P +++F + ++++VPL F G+ +PG++ +GG L
Sbjct: 67 DLPWRGKALLREVQRHPTKRFPYHLSFFSVAAQDTVEVEVPLHFVGE--APGVKIEGGAL 124
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
+T+ ++ C D +P I++D+S +++ + +L + + L+ ++ V +
Sbjct: 125 DTVLTHIQVRCAPDRIPETIEIDVSNMNIGDVVYLQELVLPEGVSLVSETNDAVVSV 181
>gi|171060169|ref|YP_001792518.1| 50S ribosomal protein L25/general stress protein Ctc [Leptothrix
cholodnii SP-6]
gi|226736334|sp|B1Y3Q0.1|RL25_LEPCP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|170777614|gb|ACB35753.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Leptothrix
cholodnii SP-6]
Length = 208
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 17/184 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
+A R GT S + R G+VP IV+ GG+ + S++ + L L +
Sbjct: 3 FVAFARELQGTGASRRLRHGGKVPGIVY-------GGSGKPTSIELDH-NALYHALKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + ++E+ + +V+ R + +H+ L+V F R +K VPL
Sbjct: 55 FHSSILEMELAGQ--------SEKVVLRALQMHAFKQLVLHVDFQRVDETTRIKKKVPLH 106
Query: 174 FRGDDVSPGLRKGGYL-NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F + S ++ L N + ++ C A+ +P ++ VDL L Q + DLK+ +
Sbjct: 107 FVNEAESQAVKLDKCLINHVVSELEIECLAEKLPEFLTVDLGGLSKGQSLHVDDLKLEAS 166
Query: 233 LKLL 236
+K++
Sbjct: 167 IKVV 170
>gi|189462542|ref|ZP_03011327.1| hypothetical protein BACCOP_03232 [Bacteroides coprocola DSM 17136]
gi|189430703|gb|EDU99687.1| ribosomal protein L25, Ctc-form [Bacteroides coprocola DSM 17136]
Length = 198
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 89/191 (46%), Gaps = 21/191 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGN-KRLISVQTNQIRKLVGHLGRSFFVSR 117
R G + + R+ VP +++ + ++G +V + +RKLV +
Sbjct: 11 RTETGKKAAHSLRQNNGVPCVLYGMQKDENGNQVATHFTVTVDGLRKLV-------YTPH 63
Query: 118 LF--DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
++ DL + + V + + + H TDA L+V FL+ E + ++VP+
Sbjct: 64 IYVVDLNIDGKI--------VNAIMKDIQFHPVTDAILHVDFLQINEENPIVMEVPVQLE 115
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G ++ G++ GG L R +K +++P + V+++ L + + I G+L + L L
Sbjct: 116 G--LAEGVKAGGKLALQTRKLKVKALYNLIPERLVVNVTNLGLGKTIKVGELN-YEGLTL 172
Query: 236 LRSKDEPVCKI 246
L +K+ VC +
Sbjct: 173 LNAKEAVVCAV 183
>gi|375256573|ref|YP_005015740.1| 50S ribosomal protein L25 [Tannerella forsythia ATCC 43037]
gi|363408495|gb|AEW22181.1| ribosomal protein L25, Ctc-form [Tannerella forsythia ATCC 43037]
Length = 220
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 42/212 (19%)
Query: 58 PRASPGTRVSVKERKAGRVPSIVFEQE------DGQHGGNKRLI-------------SVQ 98
PR + G ++S RK G +P++++ QE G+ ++L+ SV
Sbjct: 10 PRENLGKKMSKNLRKQGMIPAVLYGQEPVALPYTGKMNAGEKLVEIGDGKGIIVMDFSVS 69
Query: 99 TNQIRKLVG----HLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLN 154
+ +RKL+ HL V E G G KV + +++ H+ +DA L+
Sbjct: 70 FDGVRKLIYTPEIHL-------------VSIEMGDG---RKVNAILKEIQFHAVSDAILH 113
Query: 155 VTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
+ F + +++ VP+ G V G++ GG L R +K A+ +P + V++
Sbjct: 114 LDFQEVFADKPIEMHVPVELIGHAV--GVKAGGKLTQAMRKLKVKGLAEQIPEKLTVNVD 171
Query: 215 ELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
L++ + I G+L+ ++L+ K+ VC +
Sbjct: 172 HLELGKTIKVGELQF-DHVELISPKNAVVCAV 202
>gi|350560649|ref|ZP_08929489.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349782917|gb|EGZ37200.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 212
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 21/182 (11%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLG 110
D I A PR G+ S + R+AG++P+I++ GG+ +++ + ++ +L
Sbjct: 4 DFVIEAEPRLEQGSSASRRLRRAGKLPAILY-------GGHADPVAITLDH-NAILLNLK 55
Query: 111 RSFFVSRLF--DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
F S + +L +SE R + R V H ++V LR + +++
Sbjct: 56 HDAFYSHILTVNLNGKSE----------RAILRDVQRHPFKPTLVHVDLLRVSADEAIRV 105
Query: 169 DVPLVFRGDDVSPGLRK-GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
VPL F +D+ G++ GG +N V+ C +P I+VD+++L V + DL
Sbjct: 106 HVPLSFVNEDICKGVKTGGGMINRQLTEVEIECLPGNLPETIEVDVADLGVGDSLHLSDL 165
Query: 228 KV 229
+
Sbjct: 166 AL 167
>gi|285017303|ref|YP_003375014.1| 50S ribosomal protein L25 [Xanthomonas albilineans GPE PC73]
gi|283472521|emb|CBA15026.1| putative 50s ribosomal protein l25 [Xanthomonas albilineans GPE
PC73]
Length = 214
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 22/199 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S + R+ G +P+IV+ GG+ + +++Q + + +F S +
Sbjct: 12 REVEGKGASRRLRRDGVIPAIVY-------GGDLKPVNIQLDHNEVWLAS-QNDWFYSSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
L + +GD+ +VL R + H +++ F R +L VPL F +D
Sbjct: 64 LSLSL-----NGDV---QKVLLRDMQRHPYKQLIMHIDFQRVNDNEVLHASVPLHFLHED 115
Query: 179 VSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPA 232
VSP + + T + ++ +C +P +++VDLS L V I DLK+ P
Sbjct: 116 VSPAGKSAEVVVTHELNEIQVVCLPKDLPEFVEVDLSTLSVGDVIHLSDLKLPAGVELPQ 175
Query: 233 LKLLRSKDEPVCKIAGGRA 251
LKL + D V GR
Sbjct: 176 LKLGKEHDVAVVIAKHGRV 194
>gi|254477596|ref|ZP_05090982.1| ribosomal protein L25, Ctc-form [Ruegeria sp. R11]
gi|214031839|gb|EEB72674.1| ribosomal protein L25, Ctc-form [Ruegeria sp. R11]
Length = 179
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 76 VPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEK 135
VP +VF GG+ +S+Q +L+ L F S L++L+V + E
Sbjct: 2 VPGVVF-------GGDAEPMSIQI-PFNELLKKLKAGRFKSTLWNLKVEGQ-------ED 46
Query: 136 VRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRT 195
VRV+ R V D P + +R + + + VP+ F ++ +PG+++GG L ++
Sbjct: 47 VRVICRDVQRDVVKDLPTHFDLMRLRRTSKVNLFVPVEFINEEAAPGIKRGGVLTAVRPE 106
Query: 196 VKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAG 248
V+ + A +P + VDL+ L++ + + + K +D V I+
Sbjct: 107 VELVVTAGDIPEKLVVDLTGLNIGDTVTISSVTMPEGAKPTIDRDFVVANISA 159
>gi|311108748|ref|YP_003981601.1| 50S ribosomal protein L25, Ctc-form [Achromobacter xylosoxidans A8]
gi|310763437|gb|ADP18886.1| ribosomal protein L25, Ctc-form [Achromobacter xylosoxidans A8]
Length = 204
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ G+ S + R+AGRVP+IV+ GG ++++ + ++ L + F
Sbjct: 5 ATARSVQGSSASRRLRRAGRVPAIVY-------GGTAAPLNIELDH-NEIYHALRKEEFH 56
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + + + ++ +VL R V H+ L+V F R L VP F
Sbjct: 57 ASILQMALEGA------AKEEQVLLRSVQWHAYKPQVLHVDFQRVDANQALHTKVPFHFI 110
Query: 176 GDDVSPGLRKGG-YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+VSP ++ GG ++ + ++ C +P +I+VDL +L + D+K+
Sbjct: 111 NAEVSPAVKLGGAIISHVLTELEVTCLPAALPQFIEVDLKDLLPGASVHLADIKL 165
>gi|325858418|ref|ZP_08172580.1| ribosomal protein L25, Ctc-form [Prevotella denticola CRIS 18C-A]
gi|327313924|ref|YP_004329361.1| 50S ribosomal protein L25 [Prevotella denticola F0289]
gi|325483056|gb|EGC86044.1| ribosomal protein L25, Ctc-form [Prevotella denticola CRIS 18C-A]
gi|326944809|gb|AEA20694.1| ribosomal protein L25, Ctc-form [Prevotella denticola F0289]
Length = 204
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 141 RKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLC 200
+++ H TDA L+V F + + I VP+ G ++ G+R GG +N R +
Sbjct: 80 KELQFHPVTDALLHVDFYEVNDQKPITIGVPVKLVG--LAQGVRDGGRMNMSIRKINVKA 137
Query: 201 PADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRASDQ 254
P +P ++D+++++L + + I G+L L+L+ K+ VC I R S Q
Sbjct: 138 PYQQIPEHLDINVTDLRLGKSIKVGELSFE-GLELVTPKEVVVCSIKATRNSIQ 190
>gi|302390885|ref|YP_003826705.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetohalobium
arabaticum DSM 5501]
gi|302202962|gb|ADL11640.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetohalobium
arabaticum DSM 5501]
Length = 224
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 22/189 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R GT + + R+ G VP +V+ G N+ I+++ + L + +
Sbjct: 11 RDETGTGSARRLREQGLVPGVVY-------GRNQEPINLKLDATE-----LADVTGGNAI 58
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
DL+V E EK V+ + V TD L+V F + + + ++VP+ G
Sbjct: 59 IDLQVDGE-------EKT-VMVKDVQKDVITDEYLHVDFHQIALDEPIVVEVPISLEG-- 108
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
V+ G+++GG L R V+ C +P + +++SEL+V + + GDL+ ++L S
Sbjct: 109 VAEGVKEGGVLQKTLRKVEVQCLPTEIPSDLKLNISELEVGESLHVGDLEAGEGIELTTS 168
Query: 239 KDEPVCKIA 247
DE V +
Sbjct: 169 GDEVVVTVV 177
>gi|254424497|ref|ZP_05038215.1| ribosomal protein L25, Ctc-form [Synechococcus sp. PCC 7335]
gi|196191986|gb|EDX86950.1| ribosomal protein L25, Ctc-form [Synechococcus sp. PCC 7335]
Length = 216
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P++++ G G N + + L L ++ + + V SG
Sbjct: 20 RREGTLPAVLY----GHDGANSLPLKLSNYDAEAL---LRKASVNKSVITVNVPDVPWSG 72
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
+V+ R+V H + +++F ++ +++ +P+ F GD V +GG L+
Sbjct: 73 ------KVILREVQKHPWKNKLHHLSFFSIASQSEIEVSMPINFVGDAVG-VTDEGGTLD 125
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
T+ ++ CP D +P +DVD+SEL + + G++K+
Sbjct: 126 TVMTEIQLKCPPDAIPQSLDVDVSELKIGDALHVGEIKL 164
>gi|187477047|ref|YP_785071.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
avium 197N]
gi|109893346|sp|Q2KYA2.1|RL25_BORA1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|115421633|emb|CAJ48143.1| 50S ribosomal protein L25 [Bordetella avium 197N]
Length = 198
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 16/189 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ GT S + R+AGRVP+IV+ GG ++++ + ++ L + F
Sbjct: 5 ATLRSVQGTSASRRLRRAGRVPAIVY-------GGTAAPLNIELDH-NEIFHALRKEQFH 56
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + + + E G+ + +VL R V H L+V F R L VPL F
Sbjct: 57 ASILTMAL--EGGANE-----QVLLRSVQWHPFKQQVLHVDFQRVDANQALHTKVPLHFV 109
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
+ SP ++ G ++ + V+ C +P +I+VDL L I D+ + +
Sbjct: 110 NAETSPAVKLSGAIISHVVTEVEVTCLPQSLPQFIEVDLGNLLGGGSIHQKDIVLPKGVT 169
Query: 235 LLRSKDEPV 243
DE V
Sbjct: 170 FTHPNDEQV 178
>gi|407697453|ref|YP_006822241.1| 50S ribosomal protein L25 [Alcanivorax dieselolei B5]
gi|407254791|gb|AFT71898.1| 50S ribosomal protein L25 [Alcanivorax dieselolei B5]
Length = 215
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 26/184 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFG 128
R RVP++++ GG ++S++ ++RK L F S + L++ +
Sbjct: 25 RLQDRVPAVLY-------GGTAEPAMLSLEMRELRKA---LENEAFYSHVLTLKLEGK-- 72
Query: 129 SGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK-GG 187
E+ VL R + H + P++ FLR + + VPL F ++ S G++K GG
Sbjct: 73 -----EQQAVL-RDLQRHPSSGFPIHADFLRVDTSHAITMTVPLHFINEETSVGVKKEGG 126
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL-----RSKDEP 242
++ V+ C +P +I+VD++++ +EQ + DL + + L+ S D+P
Sbjct: 127 EIHHNVSEVQVSCLPQDLPEFIEVDMADVALEQVVHLSDLVLPKGVTLVELSHGESHDQP 186
Query: 243 VCKI 246
V +
Sbjct: 187 VAAV 190
>gi|374620517|ref|ZP_09693051.1| LSU ribosomal protein L25P [gamma proteobacterium HIMB55]
gi|374303744|gb|EHQ57928.1| LSU ribosomal protein L25P [gamma proteobacterium HIMB55]
Length = 223
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRK-LVGHLGRSFFVSRLFDLEVRSEFGS 129
R +VP+I++ GG+ +S+ IRK L HL + F S + ++ +
Sbjct: 25 RLEAKVPAIIY-------GGDSAPVSLSL--IRKDLEKHLEKEAFYSAIIEVAYDGK--- 72
Query: 130 GDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG-- 187
K + + + + H D P++ F R + +K+ VPL F ++ G++ GG
Sbjct: 73 -----KEKAILKALQRHPAKDFPMHADFFRVEADKAIKVSVPLHFVNEETCVGVKLGGGR 127
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPALKLLRSKDEP 242
+T+ PAD+ P +I+VD++++ V + DLK+ AL L +D
Sbjct: 128 IQHTVNEVEVLALPADL-PEFIEVDMADIQVGDIVHLSDLKLPDGVTSTALALGEDRDMG 186
Query: 243 VCKI 246
V +
Sbjct: 187 VASV 190
>gi|289663466|ref|ZP_06485047.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
campestris pv. vasculorum NCPPB 702]
gi|289667603|ref|ZP_06488678.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
campestris pv. musacearum NCPPB 4381]
Length = 210
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 22/192 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G S + R AG +P+IV+ GG +S+Q N + + F+ S +
Sbjct: 12 RADEGKGASRRLRHAGVIPAIVY-------GGELEPVSIQLNHEQIWLAQQNEWFY-SSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
DL + +GD+ +VL R + H +++ F R L VPL F +
Sbjct: 64 LDLNL-----NGDV---QQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEA 115
Query: 179 VSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPA 232
SP + + T + V+ +C +P +I+VDL L+V I ++K+ P
Sbjct: 116 ASPAGKSSEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGDVIHLSEIKLPAGVEIPE 175
Query: 233 LKLLRSKDEPVC 244
LKL + D V
Sbjct: 176 LKLGKEHDVAVV 187
>gi|149177254|ref|ZP_01855860.1| probable 50S ribosomal protein L25 [Planctomyces maris DSM 8797]
gi|148843968|gb|EDL58325.1| probable 50S ribosomal protein L25 [Planctomyces maris DSM 8797]
Length = 208
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGR 111
+ I A R G+ S R+AGR+P++V+ HG + +SV + ++ LV + R
Sbjct: 8 QKISATKREKLGSIESRHIRRAGRIPAVVY-----GHGQDPAHVSVDEHDLQDLVKNRER 62
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F + D++ + E + R + + L+V +R + ++VP
Sbjct: 63 VFEI----DVDGKVE----------ETMLRDLQWDTFGTQILHVDLIRINASERVTLEVP 108
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+ RG SPG GG L ++ C A +P YI V ++ L++ I D++V
Sbjct: 109 VRLRG--TSPGATDGGILEQPLHALELDCLAHSIPDYISVKINALEIGDAIHVSDIEV 164
>gi|397661352|ref|YP_006502052.1| 50S ribosomal protein L25 [Taylorella equigenitalis ATCC 35865]
gi|394349531|gb|AFN35445.1| 50S ribosomal protein L25 [Taylorella equigenitalis ATCC 35865]
gi|399115425|emb|CCG18226.1| 50S ribosomal protein L25 [Taylorella equigenitalis 14/56]
Length = 212
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 17/174 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ G+ S + R+ GR+P IV+ GG +++ + ++ L + F
Sbjct: 5 AKARSVQGSSASRRLRREGRLPGIVY-------GGKGEPLNIDLDH-NEIFHALRKQEFH 56
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S L ++++ + + VL R V H+ L++ FLR + VPL F
Sbjct: 57 SSLLEMDLDGKTET--------VLLRAVQWHAYKPQVLHIDFLRVERGQPITTKVPLNFI 108
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
D+VSP ++ G ++ I ++ C +P I VDLSEL+ + + +K
Sbjct: 109 NDEVSPAVKLHGNLISKIVTEIEVTCLPKDLPSEIVVDLSELEADSVVHLSSIK 162
>gi|357418247|ref|YP_004931267.1| 50S ribosomal protein L25/general stress protein Ctc
[Pseudoxanthomonas spadix BD-a59]
gi|355335825|gb|AER57226.1| 50S ribosomal protein L25/general stress protein Ctc
[Pseudoxanthomonas spadix BD-a59]
Length = 219
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 24/193 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G S + R+AG VP+IV+ GG + +S+Q N ++ +F S +
Sbjct: 12 RADEGKGASRRLRRAGSVPAIVY-------GGELKPVSIQINH-NEVWTASQHDWFYSSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
DL + +GD+ +VL R + H +++ F R L+ VPL F +
Sbjct: 64 LDLSL-----NGDV---QKVLLRDMQRHPFKQQIMHLDFQRVNDRETLRTAVPLHFLNQE 115
Query: 179 VSPGLRKGGYLNT--IKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HP 231
SP + + T + V PAD+ P +I+VDL + I +LK+ P
Sbjct: 116 TSPAGKSSEVVITHELNEVVVECLPADL-PEFIEVDLGNMVQGDVIHLSELKLPKGVEIP 174
Query: 232 ALKLLRSKDEPVC 244
LKL + D V
Sbjct: 175 ELKLGKEHDTAVV 187
>gi|384426742|ref|YP_005636099.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. raphani 756C]
gi|341935842|gb|AEL05981.1| ribosomal protein L25, Ctc-form [Xanthomonas campestris pv. raphani
756C]
Length = 209
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 22/198 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G S + R AG +P+IV+ GG +S+Q N + + F+ S +
Sbjct: 12 RADEGKGASRRLRHAGVIPAIVY-------GGELEPVSIQLNHEQIWLAQQNEWFY-SSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
DL + +GD+ +VL R + H +++ F R L VPL F +
Sbjct: 64 LDLNL-----NGDV---QQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSASVPLHFINEA 115
Query: 179 VSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPA 232
SP + + T + V+ +C +P +I+VDLS L+V I ++ + P
Sbjct: 116 SSPAGKSSEVVVTHELNEVQVVCLPKDLPEFIEVDLSTLEVGTVIHLSEITLPAGVEIPE 175
Query: 233 LKLLRSKDEPVCKIAGGR 250
LKL + D V G+
Sbjct: 176 LKLGKEHDVAVVIAKHGQ 193
>gi|254428105|ref|ZP_05041812.1| ribosomal protein L25, Ctc-form [Alcanivorax sp. DG881]
gi|196194274|gb|EDX89233.1| ribosomal protein L25, Ctc-form [Alcanivorax sp. DG881]
Length = 215
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 75 RVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIE 134
RVP I++ E ++ISV+ +++K L F S + L++
Sbjct: 29 RVPGILYGGE-----AEPQMISVELRELKKA---LENEAFYSHILTLKLDGA-------- 72
Query: 135 KVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK-GGYLNTIK 193
V+ + R + H PL+V LR + ++VPL F ++ S G++K GG +
Sbjct: 73 SVQAVLRDMQRHPAKGHPLHVDLLRVDKTHKITMNVPLHFINEESSIGVKKQGGEIQHNY 132
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR-----SKDEPVCKI 246
V+ C +P +I+VD++ ++E I DLK+ ++L + D+PV +
Sbjct: 133 AEVEVSCLPQHLPEFIEVDMANAELETVIHLSDLKLPKGVELTQLALGDDHDQPVAAV 190
>gi|319779110|ref|YP_004130023.1| 50S ribosomal protein L25 [Taylorella equigenitalis MCE9]
gi|317109134|gb|ADU91880.1| LSU ribosomal protein L25p [Taylorella equigenitalis MCE9]
Length = 212
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 17/174 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ G+ S + R+ GR+P IV+ GG +++ + ++ L + F
Sbjct: 5 AKARSVQGSSASRRLRREGRLPGIVY-------GGKGEPLNIDLDH-NEIFHALRKQEFH 56
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S L ++++ + + VL R V H+ L++ FLR + VPL F
Sbjct: 57 SSLLEMDLDGKTET--------VLLRAVQWHAYKPQVLHIDFLRVERGQPITTKVPLNFI 108
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
D+VSP ++ G ++ I ++ C +P I VDLSEL+ + + +K
Sbjct: 109 NDEVSPAVKLHGNLISKIVTEIEVTCLPKDLPSEIVVDLSELEADSVVHLSSIK 162
>gi|333922332|ref|YP_004495912.1| 50S ribosomal protein L25 [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333747893|gb|AEF93000.1| 50S ribosomal protein L25 [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 210
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 64 TRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHL-GRSFFVSRLFDL 121
TR S+++ R+ G +P +++ ++ G ISV +++K++G + GR+ ++ +
Sbjct: 15 TRSSLRQIREQGGIPGVLYGKQTG-----SMAISVDAKELKKILGSVNGRNTLINMNVNG 69
Query: 122 EVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSP 181
R+ V+ L HLH G +V F ++ VP+ G +
Sbjct: 70 AKRTVI--------VKSLQMD-HLHRGMQ---HVDFQEVSENTKIRTVVPVHLVGTPI-- 115
Query: 182 GLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDE 241
G+ GG + R+V+ C +P +I+VD+S L++ + DL + P +K+L
Sbjct: 116 GVTHGGIIQHDLRSVEVECLPSQIPNHIEVDISNLEIGDALSVSDLNLPPGVKVLDHPHT 175
Query: 242 PVCKIAGGRA 251
V +A +A
Sbjct: 176 TVVGVANAKA 185
>gi|363580294|ref|ZP_09313104.1| 50S ribosomal protein L25/general stress protein Ctc
[Flavobacteriaceae bacterium HQM9]
Length = 202
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 23/199 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI A R S G + + R AG VP +V+ + H + N KLV
Sbjct: 5 TINASQRESLGKKATKALRNAGSVPCVVYGGDTVTH------FTAPENSFSKLV------ 52
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ +V + + D K+ + + + H TD L++ F++ + + +++P+
Sbjct: 53 ------YTPDVHTVVIALDNGTKINAILQDIQFHPVTDKILHIDFVQIFDDKAITMEIPV 106
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFL-CPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
G SPG+ GG L R +K PA++ P I+ D+SEL + K+ L
Sbjct: 107 RTTGK--SPGVANGGNLKFNARRLKVKGLPANL-PDVIEADISELKIGNKLYVTQLN-SE 162
Query: 232 ALKLLRSKDEPVCKIAGGR 250
+ L + + VC++ R
Sbjct: 163 GFEFLHADNTVVCQVKNSR 181
>gi|21241720|ref|NP_641302.1| 50S ribosomal protein L25 [Xanthomonas axonopodis pv. citri str.
306]
gi|78046537|ref|YP_362712.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|294666031|ref|ZP_06731293.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325928009|ref|ZP_08189227.1| LSU ribosomal protein L25P [Xanthomonas perforans 91-118]
gi|346723861|ref|YP_004850530.1| 50S ribosomal protein L25 [Xanthomonas axonopodis pv. citrumelo F1]
gi|381171815|ref|ZP_09880955.1| ribosomal protein L25 [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|418518293|ref|ZP_13084442.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
gi|418523113|ref|ZP_13089137.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
gi|71153676|sp|Q8PNT9.1|RL25_XANAC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|109893405|sp|Q3BX01.1|RL25_XANC5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|21107089|gb|AAM35838.1| 50S ribosomal protein L25 [Xanthomonas axonopodis pv. citri str.
306]
gi|78034967|emb|CAJ22612.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|292604223|gb|EFF47612.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325541623|gb|EGD13147.1| LSU ribosomal protein L25P [Xanthomonas perforans 91-118]
gi|346648608|gb|AEO41232.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
axonopodis pv. citrumelo F1]
gi|380687775|emb|CCG37442.1| ribosomal protein L25 [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|410700269|gb|EKQ58831.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
gi|410704370|gb|EKQ62854.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
Length = 211
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 22/192 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G S + R AG +P+IV+ GG +S+Q N + + F+ S +
Sbjct: 12 RADEGKGASRRLRHAGVIPAIVY-------GGELEPVSIQLNHEQIWLAQQNEWFY-SSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
DL + +GD+ +VL R + H +++ F R L VPL F +
Sbjct: 64 LDLNL-----NGDV---QQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEA 115
Query: 179 VSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPA 232
SP + + T + V+ +C +P +I+VDL L+V I ++K+ P
Sbjct: 116 SSPAGKSSEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEIPE 175
Query: 233 LKLLRSKDEPVC 244
LKL + D V
Sbjct: 176 LKLGKEHDVAVV 187
>gi|418529125|ref|ZP_13095065.1| 50S ribosomal protein L25/general stress protein Ctc [Comamonas
testosteroni ATCC 11996]
gi|371453551|gb|EHN66563.1| 50S ribosomal protein L25/general stress protein Ctc [Comamonas
testosteroni ATCC 11996]
Length = 207
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
+A RA GT S + R +G+ P IV+ G +LI + N + V +
Sbjct: 3 FVATERAKQGTGASRRLRLSGKTPGIVYG------AGEAQLIEIDHNALWHAVH---KEA 53
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + D+++ + +V+ R V H ++ F R L ++VPL
Sbjct: 54 FHSSILDMDINGQV--------TKVVLRDVQFHPYKKLVQHIDFQRVDGNTKLHMNVPLH 105
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSEL 216
F G SP ++ + + + ++ +C +P +I VDLS L
Sbjct: 106 FEGAAESPAVKGENCTVTPLMHELQVICEPANLPEFIKVDLSAL 149
>gi|402847616|ref|ZP_10895893.1| ribosomal protein L25, Ctc-form [Porphyromonas sp. oral taxon 279
str. F0450]
gi|402265710|gb|EJU15171.1| ribosomal protein L25, Ctc-form [Porphyromonas sp. oral taxon 279
str. F0450]
Length = 191
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 94/197 (47%), Gaps = 28/197 (14%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSR 117
R G + + R ++P++++ GGN+ L +V + +R LV +
Sbjct: 11 RNELGKKAAKGLRAGDQIPAVLY-------GGNEVLHFTVSQDGVRNLV-------YSPD 56
Query: 118 LF--DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+F DL++ +V+ + + + H TDA L++ FL+ + ++VP+V
Sbjct: 57 IFAIDLDIDGR--------QVKAVLKDLQFHPVTDAILHLDFLQVEANKPIVMEVPVVLT 108
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G + G++ GG L+ R +K P +P + +D++EL + + I G L L++
Sbjct: 109 GH--AEGVKAGGKLSLEMRKLKVRAPYTEIPEKLFIDVTELGLGKTIQVGALSFE-GLEV 165
Query: 236 LRSKDEPVCKIAGGRAS 252
+ +K+ VC + RA+
Sbjct: 166 INAKNAVVCAVKLTRAA 182
>gi|323701607|ref|ZP_08113279.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfotomaculum nigrificans DSM 574]
gi|323533380|gb|EGB23247.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfotomaculum nigrificans DSM 574]
Length = 210
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 64 TRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHL-GRSFFVSRLFDL 121
TR S+++ R+ G +P +++ ++ G ISV +++K++G + GR+ ++ +
Sbjct: 15 TRSSLRQIREQGGIPGVLYGKQTG-----SMAISVDAKELKKILGSVNGRNTLINMNVNG 69
Query: 122 EVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSP 181
R+ V+ L HLH G +V F ++ VP+ G +
Sbjct: 70 AKRTVI--------VKSLQMD-HLHRGIQ---HVDFQEVSENTKIRTVVPVHLVGTPI-- 115
Query: 182 GLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDE 241
G+ GG + R+V+ C +P +I+VD+S L++ + DL + P +K+L
Sbjct: 116 GVTHGGIIQHDLRSVEVECLPSQIPNHIEVDISNLEIGDALSVSDLNLPPGVKVLDHPHT 175
Query: 242 PVCKIAGGRA 251
V +A +A
Sbjct: 176 TVVGVANAKA 185
>gi|226226624|ref|YP_002760730.1| 50S ribosomal protein L25 [Gemmatimonas aurantiaca T-27]
gi|226089815|dbj|BAH38260.1| 50S ribosomal protein L25 [Gemmatimonas aurantiaca T-27]
Length = 208
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G + K R+AG +PS+++ HG + ++ + +L+ + S
Sbjct: 5 TLDATARVETGKGAARKIRQAGNIPSVIY-----GHGREPQSLTTNARETERLIKSIAVS 59
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
S + +L + + R L R++ H + L++ F + + P+
Sbjct: 60 ---STVIELNIDGKTA--------RTLIREIQRHPFKRSILHIDFQELVAGETVSVKCPI 108
Query: 173 VFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
V+ G G+R +GG L+ I + +P +IDVD+S + + + + DLK+
Sbjct: 109 VYIG--TPEGVRLEGGILDQIMHELHIQVDPASIPNHIDVDISGVKLGKSLHVADLKLPA 166
Query: 232 ALKLLRSKDEPVCKIAGGRASDQK 255
+K+L VC + + ++K
Sbjct: 167 GIKVLDDATATVCVVQPPKVQEEK 190
>gi|325914244|ref|ZP_08176594.1| LSU ribosomal protein L25P [Xanthomonas vesicatoria ATCC 35937]
gi|325539499|gb|EGD11145.1| LSU ribosomal protein L25P [Xanthomonas vesicatoria ATCC 35937]
Length = 211
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 22/192 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G S + R AG +P+IV+ GG +S+Q N + + F+ S +
Sbjct: 12 RADEGKGASRRLRHAGVIPAIVY-------GGELEPVSIQLNHEQIWLAQQNEWFY-SSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
DL + +GD+ +VL R + H +++ F R L VPL F +
Sbjct: 64 LDLNL-----NGDV---QQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFVNEA 115
Query: 179 VSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPA 232
SP + + T + V+ +C +P +I+VDL L+V I ++K+ P
Sbjct: 116 SSPAGKSSEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEIPE 175
Query: 233 LKLLRSKDEPVC 244
LKL + D V
Sbjct: 176 LKLGKEHDVAVV 187
>gi|433679030|ref|ZP_20510814.1| large subunit ribosomal protein L25 [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430815854|emb|CCP41359.1| large subunit ribosomal protein L25 [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 215
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 22/198 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S + R+ G +P+IV+ GG + +++Q N + +F S +
Sbjct: 12 REVEGKGASRRLRRDGLIPAIVY-------GGELKPVNIQLNHNEVWLAS-QNDWFYSSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
L + +GD+ +VL R + H L++ F R L VPL F +D
Sbjct: 64 LSLSL-----NGDI---QKVLLRDMQRHPFKQLILHIDFQRVNDNEALHASVPLHFLNED 115
Query: 179 VSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPA 232
SP + + T + ++ +C +P +++VDLS L V I DLK+ P
Sbjct: 116 ASPAGKSAEVVVTHELNEIQVVCLPKDLPEFVEVDLSALSVGDVIHLSDLKLPAGVELPE 175
Query: 233 LKLLRSKDEPVCKIAGGR 250
LKL + D V G+
Sbjct: 176 LKLGKEHDVAVVIAKHGQ 193
>gi|390943535|ref|YP_006407296.1| 50S ribosomal protein L25 [Belliella baltica DSM 15883]
gi|390416963|gb|AFL84541.1| LSU ribosomal protein L25P [Belliella baltica DSM 15883]
Length = 190
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 135 KVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKR 194
KV+ + R+ H ++ L+ FL +K+D+P+ G SPG+ KGG L R
Sbjct: 70 KVKAILREAQFHPVSEVLLHADFLAYTENKEIKMDIPVEIMG--TSPGIIKGGKLEMKAR 127
Query: 195 TVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRASDQ 254
T+K A +P I VD+S LD+ + + +L V ++L S + + I RA
Sbjct: 128 TLKVKGLASNLPDRIPVDISHLDLGKSVKVSELSVE-GFEILTSPNVSIATIGIPRALRG 186
Query: 255 KKSK 258
KK++
Sbjct: 187 KKAE 190
>gi|452125963|ref|ZP_21938546.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
holmesii F627]
gi|452129325|ref|ZP_21941901.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
holmesii H558]
gi|451921058|gb|EMD71203.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
holmesii F627]
gi|451925195|gb|EMD75335.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
holmesii H558]
Length = 197
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ G+ S + R+AGRVP+IV+ GG ++++ + ++ L + F
Sbjct: 5 ATARSVQGSSASRRLRRAGRVPAIVY-------GGTATPLNIEMDH-NEIFHALRKEQFH 56
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + + + E G + +VL R V H ++V F R L VPL F
Sbjct: 57 ASILTMAL--EGGKSE-----QVLLRSVQWHPYKQQVMHVDFQRVDANQALHTKVPLHFI 109
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSEL 216
+ SP ++ G ++ + V+ C +P +I+VDL L
Sbjct: 110 NAETSPAVKLSGAIISHVVTEVEVTCLPKALPQFIEVDLGNL 151
>gi|429212747|ref|ZP_19203912.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. M1]
gi|428157229|gb|EKX03777.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. M1]
Length = 203
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 20/184 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R AG VP++++ GG K +SV T ++R++ L S + L V
Sbjct: 24 RNAGLVPAVIY-------GGEKAPVSV-TLELREIAKLLENEAAFSHVIALNVDGA---- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG-YL 189
K VL + + H ++ FLR + L VPL F ++ + G+++GG +
Sbjct: 72 ----KETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFLNEETAVGVKQGGGEV 127
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR---SKDEPVCKI 246
+ + V+ C +P +I+VDL++++V Q + DLK+ ++L++ D V I
Sbjct: 128 SHVISEVEVSCLPKDLPEFIEVDLAKVEVGQIVHLSDLKLPKGVELVQLAHGNDLAVANI 187
Query: 247 AGGR 250
R
Sbjct: 188 HASR 191
>gi|358635736|dbj|BAL23033.1| 50S ribosomal protein L25 [Azoarcus sp. KH32C]
Length = 200
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 75/172 (43%), Gaps = 25/172 (14%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL--ISVQTNQIRKLVGHLGRSF 113
A R GT S + R+AG+VP I++ GG + ISV N+I L L +
Sbjct: 7 ASKRVEQGTGASRRLRRAGQVPGIIY-------GGAAEVLAISVDHNEIYHL---LRKEA 56
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + +E+ K V+ R H L++ F R + + VPL
Sbjct: 57 FHASVLSVELDGA--------KQPVVLRDAQWHPFRQQVLHLDFQRIDASQKMHLKVPLH 108
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVK---FLCPADIVPPYIDVDLSELDVEQKI 222
F DVSP ++ GG + I TV C +P +++VDL L+ Q I
Sbjct: 109 FVNGDVSPAVKVGGCM--ISHTVTEADIQCLPGNLPEFLEVDLKGLEAGQSI 158
>gi|188992871|ref|YP_001904881.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris
str. B100]
gi|226694602|sp|B0RU99.1|RL25_XANCB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|167734631|emb|CAP52841.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris]
Length = 209
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G S + R AG +P+IV+ GG +S+Q N + + F+ S +
Sbjct: 12 RADEGKGASRRLRHAGVIPAIVY-------GGELEPVSIQLNHEQIWLAQQNEWFY-SSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
DL + +GD+ +VL R + H +++ F R L VPL F +
Sbjct: 64 LDLNL-----NGDV---QQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSASVPLHFINEA 115
Query: 179 VSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDV 218
SP + + T + V+ +C +P +I++DLS L+V
Sbjct: 116 SSPAGKSSEVVVTHELNEVQVVCLPKDLPEFIEIDLSTLEV 156
>gi|406923716|gb|EKD60745.1| 50S ribosomal protein L25 [uncultured bacterium]
Length = 196
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 19/171 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGRSFFVS 116
R G + + R+ G VP IV+ G N + I + N + K L F+S
Sbjct: 13 RTGTGKGAARQSRRDGFVPGIVY-------GDNTAPQPIKIPYNALLK---RLKAGRFLS 62
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
LF+L+V + V V+ R V D P ++ +R E + + + + F
Sbjct: 63 SLFNLKVEGQ-------PDVHVICRAVQRDVVKDLPTHIDLMRLHDENRINLFIHVTFIN 115
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
+ SPGL+KGG L ++ V+ A +P ++ VDL+ + I D+
Sbjct: 116 HEASPGLKKGGTLTVVRNDVELNVLAGDIPDHVTVDLTGTKIGDVIHINDI 166
>gi|254796686|ref|YP_003081522.1| ribosomal protein L25, Ctc-form [Neorickettsia risticii str.
Illinois]
gi|254589925|gb|ACT69287.1| ribosomal protein L25, Ctc-form [Neorickettsia risticii str.
Illinois]
Length = 194
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 21/200 (10%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
+I IPR S G + R++G VP++V+ +E +++ + K L S
Sbjct: 4 SIECIPRTSLGGNSADVLRRSGFVPAVVYGKERENMN-----VAISVRDVSKHFAVLSGS 58
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
V + +V +V+P+ LH + L++ F+ A E K VPL
Sbjct: 59 GVVELSCEGKVY------------KVVPKAYELHPVSSVVLHLDFVFAG-EHSSKFQVPL 105
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP- 231
F S +R G LN +KRTV C A +P I VD+ V I DL V P
Sbjct: 106 NFVNSGKSEAIRLGAMLNIVKRTVLVRCAAANLPKSIPVDIENAKVGDSIKFSDL-VFPD 164
Query: 232 -ALKLLRSKDEPVCKIAGGR 250
+ L R + V + G +
Sbjct: 165 GVVPLARDANSVVATVVGKK 184
>gi|189425650|ref|YP_001952827.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter
lovleyi SZ]
gi|226736326|sp|B3E6G0.1|RL25_GEOLS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189421909|gb|ACD96307.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter
lovleyi SZ]
Length = 194
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 89/190 (46%), Gaps = 16/190 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R+S G +S K R AGR+P IV+ + G IS++ + + G ++ L
Sbjct: 11 RSSTGKGISRKLRAAGRIPGIVYGR-----GMEPVAISLEPKALNAAIAGEGG---LNNL 62
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
LE G GDL +KV V+ ++ + P +V R ++++VP+ G
Sbjct: 63 ITLE-----GGGDL-DKVVVIVAEIQRDALKRTPEHVDLHRVNMSEKVRVNVPVSLVG-- 114
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
+ G+++GG L+ ++ C +P +I++++++L + I ++ +K + +
Sbjct: 115 TAAGVKEGGLLDFAHHSLHIECLPGQIPEHIEINIADLKIGHAIHVSEISFPAGVKCIDN 174
Query: 239 KDEPVCKIAG 248
PV + G
Sbjct: 175 PKTPVVGVLG 184
>gi|124010550|ref|ZP_01695178.1| 50S ribosomal protein L25 [Microscilla marina ATCC 23134]
gi|123982281|gb|EAY23848.1| 50S ribosomal protein L25 [Microscilla marina ATCC 23134]
Length = 204
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQI--RKLVGHLGR 111
I+ RA+ G + S R+ G VP +++ GG+K+ + Q+ I R LV
Sbjct: 6 IIGYHRANLGKKSSKDLRRDGNVPCVLY-------GGDKQ-VHFQSPMILFRDLV----- 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
+ + + + E GD K + + + H ++ ++ FL+ + +K+DVP
Sbjct: 53 --YTPNIHKVLLNVE---GD---KYECILQDIQFHPVSEIIMHADFLQISEDKAIKMDVP 104
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
+ + G SPG+ GG L + +K +P +I+VD+SEL++ + + G L
Sbjct: 105 VKYVG--TSPGVIGGGRLVSKLNKLKVSALPTKMPEFIEVDISELELGKSVKVGALST-T 161
Query: 232 ALKLLRSKDEPVCKIAGGRASDQKKS 257
++L S P+ + RA K+S
Sbjct: 162 EFEILNSDRSPIASVELTRAQRGKQS 187
>gi|284037806|ref|YP_003387736.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirosoma
linguale DSM 74]
gi|283817099|gb|ADB38937.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirosoma
linguale DSM 74]
Length = 188
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 22/198 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I+ RA+ G S R G VP +++ E+ H ++ R L+
Sbjct: 6 IVGYQRANLGRTESQAIRAEGNVPCVLYGGEEQVHFYAPAIL------FRDLI------- 52
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
+ +F++ + E + R + ++ H +D L+ FL + +KI VP+
Sbjct: 53 YTPNIFEVALNIEGA------EYRAILQEAQFHPVSDVLLHADFLLVTDKKPIKIAVPVR 106
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
G +PG++KGG L T R ++ + +P +IDVD++ LD+ + + G + V +
Sbjct: 107 LVG--TAPGVQKGGKLVTRVRKLRVKGTVENIPDFIDVDVTGLDLGKSVRVGQIPVK-NI 163
Query: 234 KLLRSKDEPVCKIAGGRA 251
++L PV I RA
Sbjct: 164 EMLEEASNPVASIEIPRA 181
>gi|33595506|ref|NP_883149.1| 50S ribosomal protein L25 [Bordetella parapertussis 12822]
gi|33599891|ref|NP_887451.1| 50S ribosomal protein L25 [Bordetella bronchiseptica RB50]
gi|410418667|ref|YP_006899116.1| 50S ribosomal protein L25 [Bordetella bronchiseptica MO149]
gi|412339839|ref|YP_006968594.1| 50S ribosomal protein L25 [Bordetella bronchiseptica 253]
gi|427813134|ref|ZP_18980198.1| 50S ribosomal protein L25 [Bordetella bronchiseptica 1289]
gi|427821056|ref|ZP_18988119.1| 50S ribosomal protein L25 [Bordetella bronchiseptica D445]
gi|427823707|ref|ZP_18990769.1| 50S ribosomal protein L25 [Bordetella bronchiseptica Bbr77]
gi|71153123|sp|Q7WNY3.1|RL25_BORBR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71153125|sp|Q7W180.1|RL25_BORPA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|33565584|emb|CAE40227.1| 50S ribosomal protein L25 [Bordetella parapertussis]
gi|33567488|emb|CAE31401.1| 50S ribosomal protein L25 [Bordetella bronchiseptica RB50]
gi|408445962|emb|CCJ57627.1| 50S ribosomal protein L25 [Bordetella bronchiseptica MO149]
gi|408769673|emb|CCJ54457.1| 50S ribosomal protein L25 [Bordetella bronchiseptica 253]
gi|410564134|emb|CCN21675.1| 50S ribosomal protein L25 [Bordetella bronchiseptica 1289]
gi|410572056|emb|CCN20311.1| 50S ribosomal protein L25 [Bordetella bronchiseptica D445]
gi|410588972|emb|CCN04035.1| 50S ribosomal protein L25 [Bordetella bronchiseptica Bbr77]
Length = 204
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ G+ S + R+AGRVP+IV+ GG ++++ + ++ L + F
Sbjct: 5 ATARSVQGSSASRRLRRAGRVPAIVY-------GGTAAPLNIELDH-NEIYHALRKEEFH 56
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + ++ + E G + VL R V H+ ++V F R L VPL F
Sbjct: 57 ASILNMVI--EGGKTE-----EVLLRSVQWHAYKPQVMHVDFQRVDANQALHTKVPLHFI 109
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+VSP ++ G ++ + + C ++P +I+V+L +L I D+K+
Sbjct: 110 NAEVSPAVKLSGAIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLADIKL 164
>gi|303238070|ref|ZP_07324611.1| ribosomal protein L25, Ctc-form [Prevotella disiens FB035-09AN]
gi|302481766|gb|EFL44820.1| ribosomal protein L25, Ctc-form [Prevotella disiens FB035-09AN]
Length = 200
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
EK + +++ H TDA L++ F + + VP+ G ++ G+R GG +N
Sbjct: 73 EKRLAVMKEIQFHPTTDAVLHIDFYEVNETKPIVMGVPVKHTG--LAQGVRDGGRMNMSI 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRAS 252
R + P +P +++D++ L + + I GDL L+L+ K+ VC I R S
Sbjct: 131 RKINVKAPYSHIPETLEIDVTNLRIGKSIKVGDLSFE-GLELVTPKEVVVCSIKATRNS 188
>gi|254468776|ref|ZP_05082182.1| ribosomal protein L25, Ctc-form [beta proteobacterium KB13]
gi|207087586|gb|EDZ64869.1| ribosomal protein L25, Ctc-form [beta proteobacterium KB13]
Length = 229
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R GT S + R+ G+VP I++ G +K +S+ + + L +
Sbjct: 4 TVTAEKRDVKGTGASRRLRRNGKVPGILY-------GNHKDAVSIVLDS-KTLHQQFHKE 55
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F + + +L S G+ K VL R L L+V F R + ++VP
Sbjct: 56 AFHASILEL---STDGT-----KESVLLRDYQLEPVKGTILHVDFQRVNQNEKIHVNVPF 107
Query: 173 VFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
F +D++ G++ +GG ++ I V C +P +I+VDL +L + + + +L +
Sbjct: 108 HFINEDIAKGVKLEGGVISHIMTEVDIACLPKDLPQFIEVDLVDLGLGESVHLSELNLPE 167
Query: 232 ALKL--LRSKDEP 242
++L L +++P
Sbjct: 168 GVELTALTEENDP 180
>gi|88608536|ref|YP_506196.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neorickettsia
sennetsu str. Miyayama]
gi|109893370|sp|Q2GEA0.1|RL25_NEOSM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|88600705|gb|ABD46173.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neorickettsia
sennetsu str. Miyayama]
Length = 194
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 84/200 (42%), Gaps = 21/200 (10%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
+I IPR S G + R++G VP++++ +E +++ + K L S
Sbjct: 4 SIECIPRTSFGRNSANVLRRSGFVPAVIYGKERENIN-----VAISVRDVSKHFAVLSGS 58
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
V + +V +V+P+ LH + L++ F+ A A K VPL
Sbjct: 59 GVVELSCEGKVY------------KVVPKAYELHPVSSVVLHLDFVFAGEHAS-KFQVPL 105
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP- 231
F S +R G LN +KRTV C A +P I VD+ V I DL V P
Sbjct: 106 NFVNSGKSEAIRLGAMLNIVKRTVLVRCTAANLPKSIPVDIENAKVGDSIKFSDL-VFPD 164
Query: 232 -ALKLLRSKDEPVCKIAGGR 250
+ L R + V + G +
Sbjct: 165 GVVPLARDANSVVATVVGKK 184
>gi|224026159|ref|ZP_03644525.1| hypothetical protein BACCOPRO_02915 [Bacteroides coprophilus DSM
18228]
gi|224019395|gb|EEF77393.1| hypothetical protein BACCOPRO_02915 [Bacteroides coprophilus DSM
18228]
Length = 198
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 89/191 (46%), Gaps = 21/191 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGG-NKRLISVQTNQIRKLVGHLGRSFFVSR 117
R G + + RK VP +++ + ++G +V T+ +R LV +
Sbjct: 11 RTETGKKATHSLRKNNGVPCVLYGIQKDENGNPVATHFTVTTDGLRNLV-------YTPH 63
Query: 118 LF--DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
++ DL + + V + + + H TDA L+V FL+ + ++VP+
Sbjct: 64 IYVVDLNIDGKV--------VNAIMKDIQFHPVTDAILHVDFLQIDEANPIVMEVPVQLE 115
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G ++ G++ GG L R +K +++P + VD++ L + + I G+L + L+L
Sbjct: 116 G--LAEGVKAGGKLALQIRKLKVKALYNVIPERLIVDVTSLGLGKTIKVGELN-YEGLQL 172
Query: 236 LRSKDEPVCKI 246
L +K+ VC +
Sbjct: 173 LNAKEAVVCAV 183
>gi|424778477|ref|ZP_18205425.1| 50S ribosomal protein L25/general stress protein Ctc [Alcaligenes
sp. HPC1271]
gi|422886627|gb|EKU29041.1| 50S ribosomal protein L25/general stress protein Ctc [Alcaligenes
sp. HPC1271]
Length = 199
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 27/207 (13%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGRSF 113
A R GT S + R+AG+VP+IV+ GG+++ +I++ N+ +L +
Sbjct: 5 ATSRDVQGTGASRRLRRAGQVPAIVY-------GGDEQPVVIALDHNETYH---NLRKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + +E+ + +VL R V H L+V F R + VPL
Sbjct: 55 FHASILTMELDGK--------AEKVLLRSVQWHPYKQQVLHVDFQRVLASQAITTKVPLN 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
F G DVSP ++ ++ I ++ C PA++ P I VDLS + + +K+
Sbjct: 107 FEGGDVSPAVKLSSQVISHILTELEITCLPANL-PASITVDLSGMTANANVHLDSIKLPR 165
Query: 232 ALKLLRSKDEPVCKIA----GGRASDQ 254
+ ++ P+ A GG A+ +
Sbjct: 166 GVTYAGNEANPLLAAALPVGGGAAASE 192
>gi|33594045|ref|NP_881689.1| 50S ribosomal protein L25 [Bordetella pertussis Tohama I]
gi|384205348|ref|YP_005591087.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
pertussis CS]
gi|408416590|ref|YP_006627297.1| 50S ribosomal protein L25 [Bordetella pertussis 18323]
gi|71153126|sp|Q7VUH2.1|RL25_BORPE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|33564119|emb|CAE43391.1| 50S ribosomal protein L25 [Bordetella pertussis Tohama I]
gi|332383462|gb|AEE68309.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
pertussis CS]
gi|401778760|emb|CCJ64214.1| 50S ribosomal protein L25 [Bordetella pertussis 18323]
Length = 208
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ G+ S + R+AGRVP+IV+ GG ++++ + ++ L + F
Sbjct: 9 ATARSVQGSSASRRLRRAGRVPAIVY-------GGTAAPLNIELDH-NEIYHALRKEEFH 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + ++ + E G + VL R V H+ ++V F R L VPL F
Sbjct: 61 ALILNMVI--EGGKTE-----EVLLRSVQWHAYKPQVMHVDFQRVEANQALHTKVPLHFI 113
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+VSP ++ G ++ + + C ++P +I+V+L +L I D+K+
Sbjct: 114 NAEVSPAVKLSGAIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLADIKL 168
>gi|288926807|ref|ZP_06420716.1| ribosomal protein L25, Ctc-form [Prevotella buccae D17]
gi|288336436|gb|EFC74813.1| ribosomal protein L25, Ctc-form [Prevotella buccae D17]
Length = 201
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 149 TDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPY 208
TDA +++ FL + + I +P+ G ++ G+R GG +N R + P +P +
Sbjct: 88 TDAVIHIDFLEVNDQKPITIGIPVKLVG--LAQGVRDGGRMNLSIRKINVTAPYQQIPEH 145
Query: 209 IDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRAS 252
+D+D++ L + + I G+L L + SK+ VC I RA+
Sbjct: 146 LDIDVTALKIGKSIKVGELSFE-GLDIATSKEVVVCSIKMTRAA 188
>gi|398802329|ref|ZP_10561543.1| ribosomal protein L25, Ctc-form [Polaromonas sp. CF318]
gi|398100230|gb|EJL90470.1| ribosomal protein L25, Ctc-form [Polaromonas sp. CF318]
Length = 231
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGR 111
+A RA GT S + R GR P IV+ GG K LI + N L + +
Sbjct: 3 FVAFERAKQGTGASRRLRITGRTPGIVY-------GGAKEPTLIEIDHNA---LFHAIKK 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F + + ++E+ + + +VL R + +H L++ F R + + + VP
Sbjct: 53 EAFHASILEMELGGK--------EQKVLLRDLQMHPYKQQILHIDFQRVEAKTKMTVKVP 104
Query: 172 LVFRGDDVSPGLRKGGYL-NTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
+ + G++ SP ++ L N + + C PADI P +I VDL L + D+ +
Sbjct: 105 VHYSGEEESPAVKTENCLVNHVITELTVSCFPADI-PEFIAVDLKGLKKGSPLHIKDITL 163
Query: 230 HPALKLL-RSKDEPV 243
+K + + +D PV
Sbjct: 164 PKGVKFVAKGQDNPV 178
>gi|163753734|ref|ZP_02160857.1| 50S ribosomal subunit protein L25 [Kordia algicida OT-1]
gi|161325948|gb|EDP97274.1| 50S ribosomal subunit protein L25 [Kordia algicida OT-1]
Length = 199
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 23/195 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI R S G + R AG+VP +++ ++ H S + KLV
Sbjct: 5 TINGSQRESVGKVATKALRNAGKVPCVLYGGDNPLH------FSAEELSFSKLV------ 52
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ + + E GS + + + H TD L++ F R + + +D+P+
Sbjct: 53 -YTPNAHTVVIALEDGSTH-----NAILQDIQFHPVTDKILHIDFYRLFDDKEVTMDIPV 106
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKF-LCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
G SPG+ GG L KR ++ PA++ P +I+ D+SEL + K+ L+ +
Sbjct: 107 KVVGK--SPGVMNGGVLRLNKRKLRVKAIPANL-PDFIEADISELKIGNKLYVTALQ-NE 162
Query: 232 ALKLLRSKDEPVCKI 246
KLL + + VC++
Sbjct: 163 NYKLLHADNTVVCQV 177
>gi|425466885|ref|ZP_18846179.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 9809]
gi|389830501|emb|CCI27520.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 9809]
Length = 185
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 32/179 (17%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGH------LGRSFFVSRLFDLEVR 124
R+ G +P++++ H G T + +VG L ++ + L D+ V
Sbjct: 20 RRQGLIPAVLY-----GHSG--------TESVSLVVGEKAALTLLKKASVNNTLVDVNVP 66
Query: 125 SEFGSGD-LIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGL 183
+G LI++V+ P K +L+ +++F L I VP+ G+ + G
Sbjct: 67 EMPWTGKALIQEVQSHPWKRNLY-------HLSFFSVSAHGKLDIVVPIKAIGEAI--GT 117
Query: 184 RKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEP 242
++GG + V C AD +P I+ D+SE+ V Q +L GDLK+ + L KD+P
Sbjct: 118 KQGGLIEQFVNEVNVSCIADNIPEVIEFDVSEIGVGQSLLVGDLKMPEGVTL---KDDP 173
>gi|315608437|ref|ZP_07883425.1| 50S ribosomal protein L25 [Prevotella buccae ATCC 33574]
gi|402305893|ref|ZP_10824951.1| ribosomal protein L25, Ctc-form [Prevotella sp. MSX73]
gi|315249897|gb|EFU29898.1| 50S ribosomal protein L25 [Prevotella buccae ATCC 33574]
gi|400380214|gb|EJP33036.1| ribosomal protein L25, Ctc-form [Prevotella sp. MSX73]
Length = 201
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 149 TDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPY 208
TDA +++ FL + + I +P+ G ++ G+R GG +N R + P +P +
Sbjct: 88 TDAVIHIDFLEVNDQKPITIGIPVKLVG--LAQGVRDGGRMNLSIRKINVTAPYQQIPEH 145
Query: 209 IDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRAS 252
+D+D++ L + + I G+L L + SK+ VC I RA+
Sbjct: 146 LDIDVTALKIGKSIKVGELSFE-GLDIATSKEVVVCSIKMTRAA 188
>gi|78187201|ref|YP_375244.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium
luteolum DSM 273]
gi|109893376|sp|Q3B380.1|RL25_PELLD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|78167103|gb|ABB24201.1| LSU ribosomal protein L25P [Chlorobium luteolum DSM 273]
Length = 202
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 27/183 (14%)
Query: 69 KERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQI--RKLVGHLGRSFFVSRLF-DLEVRS 125
K RK G VP++V+ H G + I+V N+I KLV H S + F D V+
Sbjct: 20 KLRKTGEVPAVVY------HKG-EATIAVSVNEIALNKLV-HSAESHIIDLKFPDGNVKR 71
Query: 126 EFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK 185
F I+ V+ P TD ++ F ++++DVP+ GD + G+ K
Sbjct: 72 SF-----IKDVQFDPV-------TDRVIHTDFQLVSANEVIEMDVPVAVEGDAI--GVEK 117
Query: 186 GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL--KVHPALKLLRSKDEPV 243
GG L I+ ++ +P ++ +D++ L++ I ++ P L+++ +D PV
Sbjct: 118 GGKLQIIRHSLTVKGKPGDMPAHVTIDVTALEIGHSIHVREIPATAFPGLEIMDDRDTPV 177
Query: 244 CKI 246
+
Sbjct: 178 VTV 180
>gi|222152154|ref|YP_002561314.1| 50S ribosomal protein L25/general stress protein Ctc [Macrococcus
caseolyticus JCSC5402]
gi|222121283|dbj|BAH18618.1| 50S ribosomal protein L25 [Macrococcus caseolyticus JCSC5402]
Length = 216
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 80/176 (45%), Gaps = 19/176 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R G++P++V+ +G + + V + K++ +GR+ + E G G
Sbjct: 22 RNEGKIPAVVY-----GYGASNTSVKVDEPEFVKVIREVGRNGVI----------ELGVG 66
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
+ ++V+ + + ++ FL ++ L +DV + G+ + G+++GG +
Sbjct: 67 S--KAIKVMVSDYQIDPLKNKVTHIDFLAINMKSELTVDVVVNLTGE--AQGVKEGGVVQ 122
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
+ D +P I+VD++EL++ I+ GDLK A + DE + +
Sbjct: 123 QPLFQLSVTATPDEIPETIEVDVTELNIGDSIMVGDLKADKAYTINNEDDEAIVSV 178
>gi|325110027|ref|YP_004271095.1| 50S ribosomal protein L25 [Planctomyces brasiliensis DSM 5305]
gi|324970295|gb|ADY61073.1| 50S ribosomal protein L25 [Planctomyces brasiliensis DSM 5305]
Length = 211
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLV--GH 108
D ++A R GT + + R GR P ++ +G R +V+ ++ ++ GH
Sbjct: 4 DPKLVAAERNEVGTNATKRLRNEGRTPGTLYGHNEG-----TRHFAVEAEALQPIIASGH 58
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
++ DLE+ G EK + + V + + L+ LR + +
Sbjct: 59 --------KVVDLEI------GGATEKTMI--QDVQWDTFSQYVLHFDLLRVNEKERVTT 102
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
DV LV RG ++PG+ GG L + ++ CP +P + + +++L + I GDL+
Sbjct: 103 DVELVTRG--IAPGVLAGGILELVHHSLPIECPVIRLPEQVTLRINKLQIGDSITVGDLE 160
Query: 229 V 229
+
Sbjct: 161 L 161
>gi|345867416|ref|ZP_08819427.1| ribosomal protein L25, Ctc-form [Bizionia argentinensis JUB59]
gi|344048084|gb|EGV43697.1| ribosomal protein L25, Ctc-form [Bizionia argentinensis JUB59]
Length = 208
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 21/200 (10%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI R S G + + R AG+VP +++ GG + + KLV
Sbjct: 5 TINGSKRESVGKKATKALRNAGQVPCVLY------GGGKPVHFNAEEIAFSKLV------ 52
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ + + E G +K+ + + + H TD L++ F + + + +++P+
Sbjct: 53 -YTPNAHTVVISLEGG-----DKLNAILQDIQFHPVTDRILHIDFYQLFEDKAISMEIPV 106
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F G S G++ GG L R ++ +P +I+VD++ L V K+ L+ + A
Sbjct: 107 HFIGS--SKGVKAGGVLRKNARKLRVKALPSNLPDFIEVDITPLKVGSKLYVTALE-NEA 163
Query: 233 LKLLRSKDEPVCKIAGGRAS 252
+++ + + VC+I RA+
Sbjct: 164 YQIMHTDNTVVCQIKRARAA 183
>gi|289207531|ref|YP_003459597.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio sp. K90mix]
gi|288943162|gb|ADC70861.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio sp. K90mix]
Length = 228
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 21/180 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI A R G+ S + R+AG++P+I++ E+ + + I++ N +V +L
Sbjct: 6 TIEAEKRDEQGSSASRRLRRAGKLPAILYGGEN-----DAQPITLDHN---AMVHNLKHD 57
Query: 113 FFVSRLF--DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
F S + L+ +SE + + R V H +V LR +++ V
Sbjct: 58 AFYSHILTVKLDGKSE----------KAILRDVQRHPFKPTIYHVDLLRVSANQPIRVHV 107
Query: 171 PLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
PL F ++ G++ GG ++ + ++ C +P ID+D++E+DV I +LK+
Sbjct: 108 PLHFHNEEECKGVKLGGGMVSRMLNDIEVECLPGDLPESIDIDVAEMDVGDTIHISELKL 167
>gi|300864146|ref|ZP_07109041.1| 50S ribosomal protein L25 [Oscillatoria sp. PCC 6506]
gi|300337874|emb|CBN54187.1| 50S ribosomal protein L25 [Oscillatoria sp. PCC 6506]
Length = 201
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R++G +P++++ G G +++ + L L + + L L + SG
Sbjct: 20 RRSGLIPAVLY----GHSGAESIALTINAKTVETL---LKKHVVNNALIQLNIPDISWSG 72
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
+ L R+V +H P +++F + L+++V L F G+ V + +GG L+
Sbjct: 73 ------KTLLREVQVHPWKGHPYHLSFFSVATQDSLEVEVNLHFIGEAVGVKM-EGGILD 125
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDV 218
+ +K C D +P I+VD+SE+ V
Sbjct: 126 PVLTQLKLKCKPDNIPEAINVDISEMHV 153
>gi|380510761|ref|ZP_09854168.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
sacchari NCPPB 4393]
Length = 215
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 22/199 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S + R+ G +P+IV+ GG+ + +++Q + + +F S +
Sbjct: 12 REVEGKGASRRLRRDGLIPAIVY-------GGDLKPVNIQLDHNEVWLAS-QNDWFYSSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
L + +GD+ +VL R + H +++ F R L VPL F +D
Sbjct: 64 LSLSL-----NGDV---QKVLLRDMQRHPFKQLIMHIDFQRVNDNEALHASVPLHFINED 115
Query: 179 VSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPA 232
VSP + + T + ++ +C +P +++VDL+ L V I DLK+ P
Sbjct: 116 VSPAGKSAEVVVTHELNEIQVVCLPKDLPEFVEVDLASLSVGDVIHLSDLKLPAGVELPE 175
Query: 233 LKLLRSKDEPVCKIAGGRA 251
LKL + D V GR
Sbjct: 176 LKLGKEHDVAVVIAKHGRV 194
>gi|325921463|ref|ZP_08183318.1| LSU ribosomal protein L25P [Xanthomonas gardneri ATCC 19865]
gi|325548010|gb|EGD19009.1| LSU ribosomal protein L25P [Xanthomonas gardneri ATCC 19865]
Length = 211
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 22/192 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA+ G S + R AG +P+IV+ GG +S+Q N + + F+ S +
Sbjct: 12 RANEGKGASRRLRHAGVIPAIVY-------GGELEPVSIQLNHEQIWLAQQNEWFY-SSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
DL + +GD+ +VL R + H +++ F R L VPL F +
Sbjct: 64 LDLNL-----NGDV---QQVLLRDMQRHPFKQLIIHIDFQRVSANEKLSAAVPLHFVNEA 115
Query: 179 VSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPA 232
SP + + T + V+ +C +P +I+VDL L+V I ++ + P
Sbjct: 116 TSPAGKSSEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEITLPAGVEIPE 175
Query: 233 LKLLRSKDEPVC 244
LKL + D V
Sbjct: 176 LKLGKEHDVAVV 187
>gi|114767366|ref|ZP_01446171.1| ribosomal protein L25 [Pelagibaca bermudensis HTCC2601]
gi|114540537|gb|EAU43613.1| ribosomal protein L25 [Roseovarius sp. HTCC2601]
Length = 178
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 15/176 (8%)
Query: 76 VPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEK 135
VP IVF GG+ +++Q +L+ L F S LF+L+V +
Sbjct: 2 VPGIVF-------GGDAEPLAIQL-PFNELLKRLKAGRFKSTLFNLKVDGH-------DD 46
Query: 136 VRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRT 195
VRV+ R V D P + +R + + + + + F ++ +PGL+KGG L +++
Sbjct: 47 VRVICRDVQRDVVKDLPTHFDLMRLRRTSRINLFIHVDFINEETAPGLKKGGVLTIVRQE 106
Query: 196 VKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRA 251
V+ A +P +I VDL++ + I D+ + K +D + I+ R
Sbjct: 107 VELEVLAGDIPDHITVDLADKQIGDVIHISDVTLPDGAKPTIDRDFVIANISAPRG 162
>gi|121593316|ref|YP_985212.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
sp. JS42]
gi|222110037|ref|YP_002552301.1| 50S ribosomal protein l25/general stress protein ctc [Acidovorax
ebreus TPSY]
gi|166223657|sp|A1W4G1.1|RL25_ACISJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|254801044|sp|B9ME47.1|RL25_DIAST RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|120605396|gb|ABM41136.1| LSU ribosomal protein L25P [Acidovorax sp. JS42]
gi|221729481|gb|ACM32301.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax
ebreus TPSY]
Length = 208
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 21/166 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGR 111
+A RA GT S + R +G+ P IV+ GG+ +LI + N + L +
Sbjct: 3 FVAFERAKQGTGASRRLRISGKAPGIVY-------GGSAEPQLIEIDHNALWHA---LKK 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + D+E+ + +VL R V H L+V F R + + + VP
Sbjct: 53 EAFHSSILDMELNGQV--------TKVLLRDVQYHPFKQQVLHVDFQRVDEKTRVHLKVP 104
Query: 172 LVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSEL 216
L F G + S ++ +G + + + +C +P +I VDLS L
Sbjct: 105 LHFEGVEGSQAVKVEGCTVTPLIHELDVMCMPAQLPEFIKVDLSGL 150
>gi|311028983|ref|ZP_07707073.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp.
m3-13]
gi|311032295|ref|ZP_07710385.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp.
m3-13]
Length = 213
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 30/164 (18%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P++V+ G NK I+V + + K + GR+ +S LE+ S+
Sbjct: 21 REEGLIPAVVY----GNDTENKS-ITVDSKEFIKTIRETGRNGIIS----LEIGSD---- 67
Query: 131 DLIEKVRVLPRKVHLHSGTDAPL------NVTFLRAPPEALLKIDVPLVFRGDDVSPGLR 184
RKV L+ PL ++ F ++ + +DV + GD + G++
Sbjct: 68 ---------KRKVMLYDYQINPLKSLEFVHLDFHVVNFKSEIDVDVTVHVTGD--AKGVK 116
Query: 185 KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
GG L + V + VP IDVD++ELDV + I GDLK
Sbjct: 117 DGGVLQQVLHEVSIKALPNDVPESIDVDVTELDVNENITIGDLK 160
>gi|385800630|ref|YP_005837034.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium
praevalens DSM 2228]
gi|309389994|gb|ADO77874.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium
praevalens DSM 2228]
Length = 222
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 19/196 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
+I A R G + R+ G +P +V+ G + R I V I KL
Sbjct: 5 SIEAELRTETGKGAARTIRRDGLIPGVVY-----GRGNDPRSIKVDPLDIEKL------- 52
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ +FDL E G D + V+ + L+V F + + + VP+
Sbjct: 53 LHSNAIFDLTFVGEDGGED---EATVIIKDYQKDVIKQNLLHVDFQFISMDEKITVSVPM 109
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKF-LCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
GD + G+R GG L + R ++ PA+I P I +D+SEL+V + + DL++
Sbjct: 110 RLEGD--ALGVRNGGVLQHLLREIEIDALPAEI-PEEITIDISELEVGESLAVADLELSE 166
Query: 232 ALKLLRSKDEPVCKIA 247
L L+ DE + +
Sbjct: 167 GLDLVTESDEVIVTVV 182
>gi|218508780|ref|ZP_03506658.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli Brasil 5]
Length = 116
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 166 LKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
+ +++P+ F + SPGL+ GG LN ++ V+ CPAD +P + D+DLS
Sbjct: 17 VSVEIPVHFINEAKSPGLKVGGVLNIVRHEVEVHCPADAIPEFFDIDLS 65
>gi|332711867|ref|ZP_08431797.1| LSU ribosomal protein L25P [Moorea producens 3L]
gi|332349195|gb|EGJ28805.1| LSU ribosomal protein L25P [Moorea producens 3L]
Length = 183
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSR-LFDLEVRSEFGS 129
R++G +P++++ G +G SV K L ++ V+ L +L + +
Sbjct: 20 RRSGLIPTVLY----GHNGAE----SVSLTMTAKAAEDLLKTASVNNTLIELSIPDISWN 71
Query: 130 GDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYL 189
G VL R++ H ++ +++F + +++ VPL G+ V G+++GG L
Sbjct: 72 GP------VLLREIQSHPWKNSLYHLSFFSVASQNKVEVVVPLKLVGEAV--GVKQGGIL 123
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEP 242
TVK CP D +P ID+D+S L+ + + +L + ++++ DEP
Sbjct: 124 QQRLTTVKVQCPPDKIPETIDIDISNLEQGKMLYIYELVLPEGIEVM---DEP 173
>gi|302036153|ref|YP_003796475.1| 50S ribosomal protein L25 [Candidatus Nitrospira defluvii]
gi|300604217|emb|CBK40549.1| 50S ribosomal protein L25 [Candidatus Nitrospira defluvii]
Length = 255
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 34/187 (18%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+AGRVP++++ Q G L+SV+ +++ K++ RS+ GS
Sbjct: 22 RRAGRVPAVLYGQ------GECLLLSVKPDELVKIL-----------------RSQAGST 58
Query: 131 DLIE----------KVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVS 180
LI K L R + + L+ F + +++ VP+ G
Sbjct: 59 ALISLTINGAKSKAKRTALLRDFQVDPIAGSVLHADFFEVAMDKPIRVKVPVHLTGGQ-P 117
Query: 181 PGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKD 240
GL++GG L+ + R + C ++P +I+VD S+L + Q I D+ L+ L +
Sbjct: 118 IGLKEGGVLHHVLRQLHIECLPSVLPDFIEVDASQLQINQGIHLKDIPKTEGLRFLDDLE 177
Query: 241 EPVCKIA 247
V +A
Sbjct: 178 HMVVSVA 184
>gi|108763637|ref|YP_633230.1| 50S ribosomal protein L25 [Myxococcus xanthus DK 1622]
gi|108467517|gb|ABF92702.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Myxococcus
xanthus DK 1622]
Length = 220
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A PR G V+ + R G +P++V+ G+H ISV +R+ +
Sbjct: 7 TLEAKPREGSGKGVARRLRAQGLIPAVVY----GKHLEKPVHISVNPKAVRQAIN----- 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F+ ++ + GD +VL + + T A L+ FL P +K++VPL
Sbjct: 58 --TPHKFNTLIQIKVEGGDR----QVLLKDYQMDPVTRAILHADFLDVRPTDKVKVNVPL 111
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
V G + G+ GG L +R ++ +P I+VD++ + + + + DLK+
Sbjct: 112 VLSGR--AQGVADGGLLTQARREIEVWSLPGAIPEKIEVDVTPMKIAEVLHINDLKL 166
>gi|430761937|ref|YP_007217794.1| LSU ribosomal protein L25p [Thioalkalivibrio nitratireducens DSM
14787]
gi|430011561|gb|AGA34313.1| LSU ribosomal protein L25p [Thioalkalivibrio nitratireducens DSM
14787]
Length = 212
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 19/181 (10%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLG 110
D I A PR G+ S + R+AG++P I++ GG++ +++ + ++ +L
Sbjct: 4 DFVIEAEPRLEQGSSASRRLRRAGKLPGILY-------GGHEDPVTITLDH-NAILQNLK 55
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
F S + + + SG + R + R V H ++V LR + +++ V
Sbjct: 56 HDAFYSHILTVNL-----SG---KTERAILRDVQRHPFKPTLVHVDLLRVSADEAIRVHV 107
Query: 171 PLVFRGDDVSPGLRK-GGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLK 228
PL F +++ G++ GG +N V+ C PA++ P I VD++EL V + + DL
Sbjct: 108 PLHFVNEEICKGVKTGGGMINRQLTEVEVECLPANL-PESIVVDVAELGVGETLHLSDLA 166
Query: 229 V 229
+
Sbjct: 167 L 167
>gi|424795616|ref|ZP_18221442.1| 50S ribosomal protein L25 [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422795381|gb|EKU24089.1| 50S ribosomal protein L25 [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 215
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 22/198 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S + R+ G +P+IV+ GG + +++Q N + +F S +
Sbjct: 12 REVEGKGASRRLRRDGLIPAIVY-------GGELKPVNIQLNHNEVWLAS-QNDWFYSSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
L + +GD+ +VL R + H L++ F R +L VPL F +D
Sbjct: 64 LSLSL-----NGDI---QKVLLRDMQRHPFKQLILHIDFQRVNDNEVLHASVPLHFLNED 115
Query: 179 VSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPA 232
SP + + T + ++ +C +P +++VDLS L V I DLK+ P
Sbjct: 116 SSPAGKSVEVVVTHELNEIQVVCLPKDLPEFVEVDLSALSVGDVIHLSDLKLPAGVELPE 175
Query: 233 LKLLRSKDEPVCKIAGGR 250
LKL + D V G+
Sbjct: 176 LKLGKEHDVAVVIAKHGQ 193
>gi|443328662|ref|ZP_21057257.1| ribosomal protein L25, Ctc-form [Xenococcus sp. PCC 7305]
gi|442791793|gb|ELS01285.1| ribosomal protein L25, Ctc-form [Xenococcus sp. PCC 7305]
Length = 201
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 81/176 (46%), Gaps = 15/176 (8%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P+ ++ G G +++ + + L L ++ + L DL + SG
Sbjct: 20 RREGLIPAALY----GHKGAESISLTMNAKEAQTL---LKKAAVNNTLVDLNIPDIPWSG 72
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
+ + R+V H +++F A + L + VP+ G+ + G+++GG L
Sbjct: 73 ------KAIIREVQAHPWKRTLYHLSFFSAAGDKKLNLVVPIKLLGE--AKGIKQGGILE 124
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
I + C A+ +P +IDVD+S ++ + GD+ + + +L ++ + I
Sbjct: 125 QIFTELHISCAANKIPEHIDVDVSNFEIGTNLTVGDVVLPEGVTVLDDAEQTLFSI 180
>gi|190572919|ref|YP_001970764.1| 50S ribosomal protein L25/general stress protein Ctc
[Stenotrophomonas maltophilia K279a]
gi|424667179|ref|ZP_18104204.1| 50S ribosomal protein L25 [Stenotrophomonas maltophilia Ab55555]
gi|190010841|emb|CAQ44450.1| putative 50S ribosomal protein L25 [Stenotrophomonas maltophilia
K279a]
gi|401069848|gb|EJP78369.1| 50S ribosomal protein L25 [Stenotrophomonas maltophilia Ab55555]
gi|456738073|gb|EMF62750.1| LSU ribosomal protein L25p [Stenotrophomonas maltophilia EPM1]
Length = 205
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 22/186 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R AG +P+IV+ GGN +++ + + F+ S + DL + +
Sbjct: 24 RHAGVIPAIVY-------GGNAEPVAISLDHNEIWLAQQNEWFYAS-ILDLNLDGQVQ-- 73
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
+VL R + H +++ F R L VPL F +D SP + +
Sbjct: 74 ------KVLLRDMQRHPYKQLIMHLDFQRVNENEALTASVPLHFVNEDTSPAGKAADVVV 127
Query: 191 TIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPALKLLRSKDEPVC 244
T + + V C +P I+VDL EL + D+K+ PAL L + D+ +
Sbjct: 128 THELKEVTITCLPKDLPESIEVDLGELKAGDVVYLSDIKLPKGVEIPALALGKDHDDAIV 187
Query: 245 KIAGGR 250
G+
Sbjct: 188 TAKAGK 193
>gi|410453263|ref|ZP_11307221.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
bataviensis LMG 21833]
gi|409933386|gb|EKN70314.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
bataviensis LMG 21833]
Length = 211
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 151 APLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYID 210
A L+V FL + + +DV LV G+ + G++ GG L + D +PP I+
Sbjct: 85 AILHVDFLAVDKSSKINVDVRLVLVGE--AAGVKDGGVLQQPVHQLSITSTPDNIPPQIE 142
Query: 211 VDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
VD+S L V + +LAGD+ + DE + I
Sbjct: 143 VDISNLQVGETVLAGDIPSAGGFTINHEDDEVIASI 178
>gi|295110890|emb|CBL27640.1| ribosomal protein L25, Ctc-form [Synergistetes bacterium SGP1]
Length = 216
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 141 RKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLC 200
R+V ++ TD PL+V FLR + +++P+ G + +PG++ GG L T++
Sbjct: 72 REVQVNPLTDCPLHVDFLRLIKGRKITVNIPIEVLGRESAPGVKDGGVLETLREVEVETL 131
Query: 201 PADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRA 251
P +I P + VD+S L + I DL + ++L DE V + R
Sbjct: 132 PMNI-PDVLTVDVSALQIGDAIHVRDLALPEGVELKADPDEIVAVVVMSRG 181
>gi|254464271|ref|ZP_05077682.1| ribosomal protein L25, Ctc-form [Rhodobacterales bacterium Y4I]
gi|206685179|gb|EDZ45661.1| ribosomal protein L25, Ctc-form [Rhodobacterales bacterium Y4I]
Length = 207
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 15/189 (7%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G + R+AG VP +V+ GG+ +++Q +L+ L F S L
Sbjct: 13 RAGTGKGAARAARRAGMVPGVVY-------GGDAEPLAIQV-PFNELLKKLKAGQFKSTL 64
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
++L+V + VRV+ R V D P ++ +R + + + + + F +D
Sbjct: 65 WNLKVEGH-------DDVRVICRDVQRDVVKDLPTHLDLMRLRRTSKINLYIHVEFINED 117
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
+PG++KGG L ++ V+ A +P I VDL L++ I + + K +
Sbjct: 118 KAPGIKKGGMLTVVRPEVELNVTAGDIPEKIVVDLEGLNIGDVITISSVDLPAGAKPVID 177
Query: 239 KDEPVCKIA 247
+D + I+
Sbjct: 178 RDFVIANIS 186
>gi|121997779|ref|YP_001002566.1| 50S ribosomal protein L25/general stress protein Ctc
[Halorhodospira halophila SL1]
gi|166223688|sp|A1WVQ2.1|RL25_HALHL RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|121589184|gb|ABM61764.1| LSU ribosomal protein L25P [Halorhodospira halophila SL1]
Length = 209
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 25/204 (12%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A PR G + R+A RVP +V+ G + ++++ +Q+ +L L F
Sbjct: 9 AHPRTETGRGAMRRLRRARRVPGVVYGA-----GKEPQPVALENDQLYRL---LEEEAFF 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPL--NVTFLRAPPEALLKIDVPLV 173
S + +++ SE +++ ++ P K PL ++ R + + + VPL
Sbjct: 61 STILKVQMGSETEQA-IVKDLQRHPFK---------PLVQHIDLQRVREDQPITVHVPLH 110
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV---- 229
G++ SPG++KGG L+ ++ +C +PP+IDVD+S L V Q + +L +
Sbjct: 111 VHGEEQSPGVKKGGVLHHDLLDLEVVCLPKDLPPFIDVDVSSLKVGQAVHISELTLPEGV 170
Query: 230 -HPALKLLRSKDEPVCKIAGGRAS 252
AL+ D PV + R +
Sbjct: 171 QSAALQQGEEYDAPVVSVQATRKT 194
>gi|224823793|ref|ZP_03696902.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Pseudogulbenkiania ferrooxidans 2002]
gi|224604248|gb|EEG10422.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Pseudogulbenkiania ferrooxidans 2002]
Length = 192
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 17/177 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R AG++P++V+ G N +SV + + L
Sbjct: 5 LIAAKREQLGTSASRRLRHAGKLPAVVY-------GANTEAVSVVLDH-NPVYYALKEEG 56
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + +L + E K VL R +H L++ F R + + VPL
Sbjct: 57 FHTGILNLVIDGE--------KQAVLLRDYQMHPYKQLVLHMDFQRVDLNEKMHVKVPLH 108
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F G D S ++ +G ++ + V +P +I+VDLS + Q I DLK+
Sbjct: 109 FVGADASEAVKLQGAKISHVLTEVDVRALPAQLPSFIEVDLSAIQAGQTIHLSDLKL 165
>gi|288928358|ref|ZP_06422205.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 317 str.
F0108]
gi|288331192|gb|EFC69776.1| ribosomal protein L25, Ctc-form [Prevotella sp. oral taxon 317 str.
F0108]
Length = 200
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 21/195 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSR 117
R++ G + S + RK G +P ++ ++ G + L +V +RK+V +
Sbjct: 11 RSNLGKKASKEMRKEGLIPCNLYGEKKNADGLPEALSFAVPMADLRKVV-------YTPH 63
Query: 118 LF--DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
++ +L++ + K + +++ H TDA L+V F E + I +P+
Sbjct: 64 IYVVNLDIDGQ--------KHTAIMKELQFHPVTDALLHVDFYEINEEKSIAIGIPVNLV 115
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G ++ G+R GG L+ R + P +P +D+D++ L + + I AG+L L++
Sbjct: 116 G--LAQGVRDGGRLSLSIRKLMVKAPYKQIPEKLDIDVTALTIGKSIKAGELSFE-GLEV 172
Query: 236 LRSKDEPVCKIAGGR 250
+ KD VC + R
Sbjct: 173 VTPKDVIVCTVKMTR 187
>gi|434400005|ref|YP_007134009.1| LSU ribosomal protein L25P [Stanieria cyanosphaera PCC 7437]
gi|428271102|gb|AFZ37043.1| LSU ribosomal protein L25P [Stanieria cyanosphaera PCC 7437]
Length = 198
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEV-RSEFGS 129
R+ G +P+ ++ G +G +++ + L L + + L DL + +
Sbjct: 20 RREGFIPAALY----GHNGTESVSLTIDAKDAQTL---LKNAAVNNTLVDLSIPELPWNG 72
Query: 130 GDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYL 189
LI +V+V P K LH +++F L++ VP+ G+ + G+++GG L
Sbjct: 73 KALIREVQVHPWKKTLH-------HLSFFSVAAHGTLELVVPIKIVGE--AAGIKQGGIL 123
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
+ + C A+ +P I++++S+ ++ + GD+ + + L D V I
Sbjct: 124 EQMMTELNISCTAENIPESIEINISQFEIGSNLTVGDVILSEGVTALDESDRIVVAI 180
>gi|239817313|ref|YP_002946223.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Variovorax
paradoxus S110]
gi|259646698|sp|C5CYZ6.1|RL25_VARPS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|239803890|gb|ACS20957.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Variovorax
paradoxus S110]
Length = 224
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
+A RA GT S + R +G+ P IV+ E G +LI + N + L +
Sbjct: 3 FVAFERAKQGTGASRRLRISGKTPGIVYGGE-----GKPQLIELDHNALWHA---LKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + ++E+ +VL R V H ++ F R + + + VPL
Sbjct: 55 FHSSILEMELGGATS--------KVLLRDVQYHPFRQLVQHIDFQRVDAKTRMHMKVPLH 106
Query: 174 FRGDDVSPGLRKGGYLNT-IKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
++G++ S ++ L T + ++ C PAD+ P +I+VDLS L + D+K+
Sbjct: 107 YKGEEESDAVKLDHNLVTHVMTELEVSCLPADL-PEFIEVDLSGLKKNATLHVNDIKLPK 165
Query: 232 ALKLL 236
+K +
Sbjct: 166 GVKFV 170
>gi|148381066|ref|YP_001255607.1| 50S ribosomal protein L25 [Clostridium botulinum A str. ATCC 3502]
gi|153931183|ref|YP_001385439.1| 50S ribosomal protein L25 [Clostridium botulinum A str. ATCC 19397]
gi|153935360|ref|YP_001388846.1| 50S ribosomal protein L25 [Clostridium botulinum A str. Hall]
gi|148290550|emb|CAL84678.1| putative general stress protein [Clostridium botulinum A str. ATCC
3502]
gi|152927227|gb|ABS32727.1| 50S ribosomal protein L25 [Clostridium botulinum A str. ATCC 19397]
gi|152931274|gb|ABS36773.1| 50S ribosomal protein L25 [Clostridium botulinum A str. Hall]
Length = 178
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 24/186 (12%)
Query: 67 SVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGRSFFVSRLFDLEVR 124
S K R+ G+VP I++ G++ N + ++ N + VG G + D +V
Sbjct: 14 SNKVRRDGKVPGIIY----GKNLNNLMFEVGEIELNNMISQVGEHGVTDINYEGTDYKV- 68
Query: 125 SEFGSGDLIEKVRVLP-RKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGL 183
LI++V+ P +K +H + NVT L+ ++P++F GDD+ +
Sbjct: 69 -------LIKEVQKDPVKKNVIHIDLE---NVT----NSSNLINAEIPILFSGDDLI--M 112
Query: 184 RKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPV 243
+KGG + K +VK CP + +P I VDLS+ D+ + DL++ + + + D +
Sbjct: 113 KKGGIVQKEKNSVKVRCPEEKLPNNIMVDLSQYDIGKTFRISDLELGEDITFMENLDSTI 172
Query: 244 CKIAGG 249
I G
Sbjct: 173 VSIFFG 178
>gi|365920140|ref|ZP_09444492.1| ribosomal protein L25, Ctc-form [Cardiobacterium valvarum F0432]
gi|364578498|gb|EHM55700.1| ribosomal protein L25, Ctc-form [Cardiobacterium valvarum F0432]
Length = 219
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 43 LPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQI 102
+ + Y T+ A R G S + R+ G VP+IV+ GG ++ +S+ +Q
Sbjct: 1 MEKTMSNYAYTLSATVRQDNGKGASRRLRREGLVPAIVY-------GGEEKPLSIAISQ- 52
Query: 103 RKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPP 162
LV + F S++ L+V G GD + V+ R V H ++ F R
Sbjct: 53 DSLVRYGKFDSFYSQIICLQVE---GQGD----IEVIVRDVQRHLYKPLYQHLDFQRIVR 105
Query: 163 EALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
L+ V L F ++ S G++ GG + +V +C +P I++D++E + I
Sbjct: 106 GQELQATVSLHFINEESSVGVKAGGLVEHHLNSVDIVCLPRNLPENIEIDMAEAALGDVI 165
Query: 223 LAGDLKVHPALKLLRSKDEPVCKIA 247
DLK+ ++L+ + +A
Sbjct: 166 HLRDLKLPQGVRLVHEDERAEVVVA 190
>gi|440732738|ref|ZP_20912543.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
translucens DAR61454]
gi|440367508|gb|ELQ04569.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
translucens DAR61454]
Length = 215
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 22/198 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S + R+ G +P+IV+ GG + +++Q N + +F S +
Sbjct: 12 REVEGKGASRRLRRDGLIPAIVY-------GGELKPVNIQLNHNEVWLAS-QNDWFYSSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
L + +GD+ +VL R + H L++ F R L VPL F +D
Sbjct: 64 LSLSL-----NGDI---QKVLLRDMQRHPFKQLILHIDFQRVNDNEALHASVPLHFLNED 115
Query: 179 VSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPA 232
SP + + T + ++ +C +P +++VDLS L V I DLK+ P
Sbjct: 116 ASPAGKSVEVVVTHELNEIQVVCLPKDLPEFVEVDLSALSVGDVIHLSDLKLPAGVELPE 175
Query: 233 LKLLRSKDEPVCKIAGGR 250
LKL + D V G+
Sbjct: 176 LKLGKEHDVAVVIAKHGQ 193
>gi|42524123|ref|NP_969503.1| 50S ribosomal protein L25 [Bdellovibrio bacteriovorus HD100]
gi|71153121|sp|Q6MJR4.1|RL25_BDEBA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|39576331|emb|CAE80496.1| 50S ribosomal protein L25 [Bdellovibrio bacteriovorus HD100]
Length = 212
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
+ + LF+L+ + +G + VL + V +H T P +V F + ++++V +
Sbjct: 56 YENALFNLKSSDKTANG-----IVVLIKSVDVHPLTRRPQHVDFFALDLKKAVRVNVEVR 110
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
G + GL +GG LN + R+V+ C +P + D+S L V + D+KV ++
Sbjct: 111 LEGKAI--GLSEGGLLNVVLRSVEVECLPTEIPEFFTADISNLAVGDALHVSDIKVSGSV 168
Query: 234 KLLRSKDEPVCKI 246
K++ ++ + +
Sbjct: 169 KMITGAEQTIAVV 181
>gi|407803838|ref|ZP_11150670.1| 50S ribosomal protein L25/general stress protein Ctc [Alcanivorax
sp. W11-5]
gi|407022248|gb|EKE34003.1| 50S ribosomal protein L25/general stress protein Ctc [Alcanivorax
sp. W11-5]
Length = 212
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ R+P IV+ GG+ V T ++R+LV L F S + L++ +
Sbjct: 25 RQEARIPGIVY-------GGSAEPQMV-TLELRELVKALENEAFYSHVLTLKIDGKTQQA 76
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK-GGYL 189
L R + H P++ FLR + + VPL F +D G+++ GG +
Sbjct: 77 VL--------RDLQRHPAKGTPMHADFLRVDKTHKITMQVPLHFLNEDKCVGVKQQGGKI 128
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
V+ C +P ++++D++++ ++Q + D+K+ ++L+
Sbjct: 129 THNASEVEVSCLPQNLPEFLEIDMADVKLDQVVHLSDIKLPKGVELV 175
>gi|78189123|ref|YP_379461.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium
chlorochromatii CaD3]
gi|109893352|sp|Q3ARF7.1|RL25_CHLCH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|78171322|gb|ABB28418.1| LSU ribosomal protein L25P [Chlorobium chlorochromatii CaD3]
Length = 195
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 69 KERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFG 128
K RK+G VP++V+ + G +S+Q + KLV H S + DL+ F
Sbjct: 20 KLRKSGLVPAVVYHK-----GEETVAVSIQELALTKLV-HSAES----HIIDLQ----FP 65
Query: 129 SGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGY 188
G L R ++V H TD ++ F + ++++ VP+ G+ V G+ KGG
Sbjct: 66 DGKL---KRSFIKEVQFHPVTDRIIHADFQLFSADEIVEMVVPVSVSGESV--GVEKGGK 120
Query: 189 LNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV--HPALKLLRSKDEPVCKI 246
L I ++ +P + +D++ LD+ I ++ + +P L ++ D PV +
Sbjct: 121 LQIIMHSLTLKGKPTDMPEHFVIDITALDLAHSIHVREIPMTNYPGLTIMDEPDAPVITV 180
Query: 247 AGGR 250
R
Sbjct: 181 LATR 184
>gi|407937688|ref|YP_006853329.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
sp. KKS102]
gi|407895482|gb|AFU44691.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
sp. KKS102]
Length = 211
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 30/204 (14%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLG 110
+A RA GT S + R +G+ P IV+ GG +LI V N + L
Sbjct: 2 NFVAFERAKQGTGASRRLRNSGKTPGIVY-------GGAAEPQLIEVDHNALWHA---LK 51
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
+ F S + D+EV +V+ R V H L++ F R + L + V
Sbjct: 52 KEAFHSSVLDMEVAGTTS--------KVVLRDVQYHPYKQLVLHIDFQRVDDKTKLHLKV 103
Query: 171 PLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
PL + G + S ++ +N + + C +P +I VDLS+L+ + D+K+
Sbjct: 104 PLHYSGAEESNAVKVDKCMVNPVVNELDVTCMPSDLPEFIAVDLSKLEKGASLHLKDIKL 163
Query: 230 HPALKLLRSKDEPVCKIAGGRASD 253
+ V K+ GG+ ++
Sbjct: 164 PKGV---------VAKVRGGQNNN 178
>gi|374585774|ref|ZP_09658866.1| LSU ribosomal protein L25P [Leptonema illini DSM 21528]
gi|373874635|gb|EHQ06629.1| LSU ribosomal protein L25P [Leptonema illini DSM 21528]
Length = 194
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLG 110
+ TI A R++ G S + R AGR+P+ + ++ GN I + + KL+
Sbjct: 2 NRTIEASTRSARGKNESRRLRAAGRIPANLLDR------GNSTPIEIDDREFEKLIAGGL 55
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
RS S F L++ + VL +++H H + +V F + P ++ +
Sbjct: 56 RS---SSKFKLKLNGA--------EQEVLAKEIHRHPVSGRIFHVDFYKVNPGHKFRVAI 104
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVH 230
+ G + G++ GG L R +K + + + I+VD+++L V + + L +
Sbjct: 105 AVELTGS--AKGVKAGGALEHYIRQLKVVTVPEKIIEKIEVDITDLGVGEAVHLSQLNLP 162
Query: 231 PALKLLRSKDEPVCKIAGGR-----ASDQKK 256
+ + D VC++A R ASD K+
Sbjct: 163 SEWETRLTGDPVVCRVAQSRMTLKAASDGKE 193
>gi|320104416|ref|YP_004180007.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Isosphaera
pallida ATCC 43644]
gi|319751698|gb|ADV63458.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Isosphaera
pallida ATCC 43644]
Length = 202
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 63 GTRVSVKERKAGRVPSIVFEQEDG------QHGGNKRLISVQTNQIRKLVGHLGRSFFVS 116
GTRV+ K R+ G +P+I++ ++ +H R+I Q++++ +V V
Sbjct: 21 GTRVARKLRQQGLIPAIIYGHKEPNLPIVLKHDDVWRIIKQQSHRVDLVVAGKTEEVLVR 80
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
V+ + S D+I ++ F R PE ++ V L F+G
Sbjct: 81 -----HVQWDHLSRDII--------------------HLDFYRVSPEETVESIVRLEFKG 115
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
G+ GG L T +K C AD +P I VDLS L++ Q + A D+ + +KL
Sbjct: 116 --TPAGVAAGGLLETPVHELKVDCRADSIPDLIAVDLSGLELGQSLYARDVPLPAGVKLH 173
Query: 237 RSKDEPVCKIAG 248
+ D V +
Sbjct: 174 GNPDLLVAHVVA 185
>gi|308274567|emb|CBX31166.1| 50S ribosomal protein L25 [uncultured Desulfobacterium sp.]
Length = 211
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P++++ G + L+S+ I+ L L ++ + ++E+++ G
Sbjct: 18 RRMGEIPAVIY-----GPGKDTNLLSIT---IKDLEDILKKAKVGQAILNIEIQN----G 65
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
L + ++ +++ +H + L+V F + +K+ +P+V +G ++ G+ GG L
Sbjct: 66 ALHTRTAMI-KELQIHPVSRELLHVDFYEISMDRKIKVKIPVVTKG--IAKGIDFGGMLQ 122
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
IKR ++ LC +P I++D+++L++ I DL
Sbjct: 123 IIKREIEILCLPVGIPESIEIDITDLNIGDSIHVNDL 159
>gi|88704033|ref|ZP_01101748.1| 50S ribosomal subunit protein L25 [Congregibacter litoralis KT71]
gi|88701860|gb|EAQ98964.1| 50S ribosomal subunit protein L25 [Congregibacter litoralis KT71]
Length = 221
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
L F S++ D+ V + L + + H + ++ FLR + +K+
Sbjct: 55 LENEAFYSQVIDVSVDGDVQPAIL--------KDLQRHPARNDVMHADFLRVDAKVAIKV 106
Query: 169 DVPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
++PL F ++ G++ +GG + + ++ LC ++P YI+VD+ + I DL
Sbjct: 107 NIPLHFINEEKCHGVKIEGGIIEHLLTELEVLCLPGLIPEYIEVDMENVTTADIIHISDL 166
Query: 228 K-----VHPALKLLRSKDEPVCKIAGGRASDQK 255
K V AL+L D V ++ R D++
Sbjct: 167 KLPEGVVSTALELGEDHDMAVTSVSAKRGGDEE 199
>gi|149203915|ref|ZP_01880883.1| ribosomal protein L25 [Roseovarius sp. TM1035]
gi|149142357|gb|EDM30402.1| ribosomal protein L25 [Roseovarius sp. TM1035]
Length = 208
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 17/195 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A RA G + R+AG VP +VF GG+K +++ L+ L + F
Sbjct: 10 AQERAGTGKGAARAARRAGMVPGVVF-------GGDKEPLAINI-PFNALLKRLKKGRFK 61
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S LF+L+V + VRV+ R V D P +V +R + + + + F
Sbjct: 62 STLFNLQVEGH-------DDVRVICRDVQRDVVKDLPTHVDLMRLRRTTRINLFIHVDFI 114
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK- 234
+ LRKGG L ++ V+ A +P ++ VDLS+++ ++ + PA
Sbjct: 115 NAEQCKALRKGGVLTVVRPEVELNVLAGDIPDHVTVDLSKVEKIGDVVTISMVDLPAGSE 174
Query: 235 -LLRSKDEPVCKIAG 248
+++ +D +C I+
Sbjct: 175 PVIKDRDFVICNISA 189
>gi|387819381|ref|YP_005679728.1| ribosomal protein L25 general stress protein [Clostridium botulinum
H04402 065]
gi|322807425|emb|CBZ04999.1| ribosomal protein L25 general stress protein [Clostridium botulinum
H04402 065]
Length = 178
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 24/186 (12%)
Query: 67 SVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGRSFFVSRLFDLEVR 124
S K R+ G+VP I++ G++ N + ++ N + VG G + D +V
Sbjct: 14 SNKVRRDGKVPGIIY----GKNLNNLMFEVGEIELNSMISQVGEHGVTDINYEGTDYKV- 68
Query: 125 SEFGSGDLIEKVRVLP-RKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGL 183
LI++V+ P +K +H + NVT L+ ++P++F GDD+ +
Sbjct: 69 -------LIKEVQKDPVKKNVIHIDLE---NVT----NSSNLINAEIPILFSGDDLI--M 112
Query: 184 RKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPV 243
+KGG + K +VK CP + +P I VDLS+ D+ + DL++ + + + D +
Sbjct: 113 KKGGIVQKEKNSVKVRCPEEKLPNNIMVDLSQYDIGKTFRISDLELGEDITFMENLDSTI 172
Query: 244 CKIAGG 249
I G
Sbjct: 173 VSIFFG 178
>gi|258647538|ref|ZP_05735007.1| ribosomal protein L25, Ctc-form [Prevotella tannerae ATCC 51259]
gi|260852318|gb|EEX72187.1| ribosomal protein L25, Ctc-form [Prevotella tannerae ATCC 51259]
Length = 206
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGR 111
+I + R G R + R+ G +P ++ Q+ ++G + ++ +KL+
Sbjct: 5 SISGVKRTEVGKRATKALRREGLIPCNLYGQQKNENGEAVAMAFAISEKDAQKLI----- 59
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
+ ++ +++ + E + + R+ H D L++ FL E + I VP
Sbjct: 60 --YTPHIYLVDINIDG------EDHKAVLRESQFHPVKDNILHIDFLEVHAERPIVIGVP 111
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
+ +G ++ G+R GG L T+ R + +P + +D++EL + + I GDL +
Sbjct: 112 IQTQG--LAEGVRAGGRLMTLIRKINVRALYQDIPEKLQIDVTELKLGKSIKVGDLS-YD 168
Query: 232 ALKLLRSKDEPVCKIAGGRAS 252
L+L+ KD V + RA+
Sbjct: 169 KLELVTPKDVIVVSVKMTRAA 189
>gi|116751071|ref|YP_847758.1| 50S ribosomal protein L25/general stress protein Ctc
[Syntrophobacter fumaroxidans MPOB]
gi|166223726|sp|A0LPH1.1|RL25_SYNFM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|116700135|gb|ABK19323.1| LSU ribosomal protein L25P [Syntrophobacter fumaroxidans MPOB]
Length = 199
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 9/134 (6%)
Query: 95 ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLN 154
+SV ++ +L+ +G S+L L V + G+ ++ + VL R+V +H L+
Sbjct: 41 LSVPRQRLERLLRDMGEE---SKLLRLTVEGD-GTAEMKQ---VLIREVQVHPVRRRFLH 93
Query: 155 VTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
V F P + + ++VP+ G+ V G++KGG LN I+R + C +P + VD+S
Sbjct: 94 VDFYEVPLDHPIVVEVPVELLGEPV--GVKKGGTLNLIQRMLSVRCLPGEIPEKVQVDVS 151
Query: 215 ELDVEQKILAGDLK 228
+LD+ I L+
Sbjct: 152 KLDIGSSIQVEQLR 165
>gi|347541314|ref|YP_004848740.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Pseudogulbenkiania sp. NH8B]
gi|345644493|dbj|BAK78326.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Pseudogulbenkiania sp. NH8B]
Length = 192
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISV--QTNQIRKLVGHLGR 111
++A R GT S + R AG++P++V+ G N +SV + N + + G
Sbjct: 5 LIAAKREQLGTSASRRLRHAGKLPAVVY-------GANTEAVSVVLEHNPVYYALKEEG- 56
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F + + +L + E K VL R +H L++ F R + + VP
Sbjct: 57 --FHTGILNLVIDGE--------KQAVLLRDYQMHPYKQLVLHMDFQRVDLNEKMHVKVP 106
Query: 172 LVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
L F G D S ++ +G ++ + V +P +I+VDLS + Q I DLK+
Sbjct: 107 LHFVGADASEAVKLQGAKISHVLTEVDVRALPAQLPSFIEVDLSAIQAGQTIHLSDLKL 165
>gi|340618126|ref|YP_004736579.1| 50S ribosomal protein L25 [Zobellia galactanivorans]
gi|339732923|emb|CAZ96298.1| Ribosomal protein L25 [Zobellia galactanivorans]
Length = 209
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSR 117
R S G + + R AG+VP +V+ GG K L S R LV +
Sbjct: 11 RESVGKKATKALRNAGQVPCVVY-------GGEKPLHFSADELAFRDLV-------YTPA 56
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
+E+ GS KVR + + + H TD L++ F + + + +++P+ +G+
Sbjct: 57 AHTVEIDLN-GS-----KVRAIMQDIQFHPVTDRILHIDFYQLFDDKEVTMNIPVRLQGN 110
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
+PG+R GG L KR + D +P + DVD+S+L + + I L
Sbjct: 111 --APGVRSGGRLLFRKRKLAIKALPDNLPDFFDVDISKLKIGENITVESL 158
>gi|390991980|ref|ZP_10262229.1| ribosomal protein L25, Ctc-form [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372553267|emb|CCF69204.1| ribosomal protein L25, Ctc-form [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 211
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 22/192 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S + R AG +P+IV+ GG +S+Q N + + F+ S +
Sbjct: 12 RVDEGKGASRRLRHAGVIPAIVY-------GGELEPVSIQLNHEQIWLAQQNEWFY-SSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
DL + +GD+ +VL R + H +++ F R L VPL F +
Sbjct: 64 LDLNL-----NGDV---QQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEA 115
Query: 179 VSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPA 232
SP + + T + V+ +C +P +I+VDL L+V I ++K+ P
Sbjct: 116 SSPAGKSSEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEIPE 175
Query: 233 LKLLRSKDEPVC 244
LKL + D V
Sbjct: 176 LKLGKEHDVAVV 187
>gi|424834857|ref|ZP_18259548.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium
sporogenes PA 3679]
gi|365978418|gb|EHN14498.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium
sporogenes PA 3679]
Length = 178
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 165 LLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILA 224
L+ ++P++F GD++ ++KGG + K +VK CP + +P I VDLS+ D+ +
Sbjct: 96 LINAEIPILFSGDELI--MKKGGVVQKEKNSVKVRCPGEKLPNNIMVDLSQYDIGKTFRI 153
Query: 225 GDLKVHPALKLLRSKDEPVCKIAGG 249
DL++ + + S D + I G
Sbjct: 154 SDLELGEDITFMESLDSTIASIFFG 178
>gi|221135305|ref|ZP_03561608.1| 50S ribosomal protein L25/general stress protein Ctc [Glaciecola
sp. HTCC2999]
Length = 209
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S + R A +VP+I++ G +K +S+ T KL+ F S +
Sbjct: 13 RTDLGKGASRRLRHADKVPAILY-------GADKEPVSL-TLAHNKLMQAQEFEAFYSHV 64
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
L+V E KV L + + H L+V FLR + +VP+ F ++
Sbjct: 65 LTLDVDGE--------KVEALVKDMQRHPYKPKILHVDFLRVDASKAVHTNVPVHFINEE 116
Query: 179 VSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL- 236
+P ++ +GG+ ++ C +P +I+VDL+ +++ Q + D+ + + +
Sbjct: 117 TAPAIKTQGGHAEHHVNEIEVSCLPSQLPEFIEVDLTNVELGQTLHLSDITLPEGVSSIE 176
Query: 237 ----RSKDEPVCKI--AGGRASDQ 254
S D V I A G+A+D+
Sbjct: 177 LAKGESHDLAVVTIKAAKGKAADE 200
>gi|402548558|ref|ZP_10845411.1| 50S ribosomal protein L25/general stress protein Ctc [SAR86 cluster
bacterium SAR86C]
gi|402548859|ref|ZP_10845712.1| 50S ribosomal protein L25/general stress protein Ctc [SAR86 cluster
bacterium SAR86C]
Length = 229
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 74 GRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLI 133
G +P+I++ E I ++ N++ K F+ L +GDL
Sbjct: 28 GMIPAIIYGDEKDSLN-----IKLKLNELTK--ASQNELFYTQVLI-------IKNGDLE 73
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLR-KGGYLNTI 192
EKV + +++ L+ FLR + LK+ +P+ F ++ G++ +GG LN
Sbjct: 74 EKV--VLKELQKDPAKGKFLHADFLRVSRKTKLKVIIPINFLNEEECAGVKNEGGVLNKT 131
Query: 193 KRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
R V+ +C A +P ID+D++ LD+ Q +
Sbjct: 132 IREVEVMCLAGNIPESIDIDVTALDLGQSV 161
>gi|404404880|ref|ZP_10996464.1| 50S ribosomal protein L25/general stress protein Ctc [Alistipes sp.
JC136]
Length = 190
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
++ A+ RA G + + R+ G VP ++ G+ SV +I+ L+ + S
Sbjct: 5 SVKAVKRADFGKKAAKAVRREGMVPCVLCGN------GDTETFSVDPREIKPLI-YTPNS 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ V FD+E + E + R+V H + L++ F R + I +P+
Sbjct: 58 YIVE--FDIEGKKELA----------VMREVQFHPIREEILHLDFFRIADGKPVSIAIPV 105
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
G+ + G++ GG L R + + +P I VD++ L V + I GDL +
Sbjct: 106 RLTGN--AEGVKVGGKLALSARKLVVSALVENLPDEIVVDVTSLGVGKTIFVGDLNIEN- 162
Query: 233 LKLLRSKDEPVCKIAGGRAS 252
LK + VC + RAS
Sbjct: 163 LKFVTPASTAVCAVRVTRAS 182
>gi|338214175|ref|YP_004658232.1| 50S ribosomal protein L25 [Runella slithyformis DSM 19594]
gi|336307998|gb|AEI51100.1| 50S ribosomal protein L25 [Runella slithyformis DSM 19594]
Length = 187
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 143 VHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPA 202
V H +D L+ FL E +KI+VP+ F G V G+ KGG L R +K + A
Sbjct: 76 VQYHPVSDIILHADFLAVDDEKEIKIEVPVRFTGTAV--GVTKGGKLVQKLRKIKVVGLA 133
Query: 203 DIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRA 251
+P ++DV + +LD+ + + G LKV K++ + P+ + RA
Sbjct: 134 KNIPDFVDVPVGDLDLGKSVKVGQLKVE-GFKIVNNASLPIAGVEIPRA 181
>gi|398810407|ref|ZP_10569226.1| ribosomal protein L25, Ctc-form [Variovorax sp. CF313]
gi|398083039|gb|EJL73771.1| ribosomal protein L25, Ctc-form [Variovorax sp. CF313]
Length = 227
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 24/206 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGR 111
+A RA GT S + R +G+ P IV+ GG+ + LI + N L L +
Sbjct: 3 FVAFERAKQGTGASRRLRISGKTPGIVY-------GGDTQPQLIEIDHNA---LWHALKK 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F + + ++E+ G + KV L R V H ++ F R + + + VP
Sbjct: 53 EAFHASVLEMEI------GGAVSKV--LLRDVQYHPFRQLVQHIDFQRVDAKTRMTMKVP 104
Query: 172 LVFRGDDVSPGLRKG-GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKV 229
+ F+G++ S ++ +N + ++ C P+D+ P +I+VDLS L + D+K+
Sbjct: 105 VHFKGEEESEAVKIDLNLVNHVTTELELNCLPSDL-PEFIEVDLSGLKKNGTVTLKDIKL 163
Query: 230 HPALKLL-RSKDEPVCKIAGGRASDQ 254
+K + K PV A A+++
Sbjct: 164 PKGVKWVSHGKVNPVLASAVSPAAEE 189
>gi|406987406|gb|EKE07766.1| 50S ribosomal protein L25 [uncultured bacterium]
Length = 188
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 84/169 (49%), Gaps = 13/169 (7%)
Query: 66 VSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRS 125
V+ + R+ G VP+I++ G+ G ++V+ + +++++ + + +F+LE +
Sbjct: 15 VTSQLRREGMVPAILYGA--GKAGTP---VAVKNDTLKEILRKIQPGRLSTTIFELERGA 69
Query: 126 EFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK 185
+ ++ + + V H + +V FL L++I+VP+ G G++
Sbjct: 70 K--------TIQAIIKDVQYHVASYEIEHVDFLEMEESKLVEINVPISLVGAADCAGVKL 121
Query: 186 GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
GG++ + R++K C +P +D+ + + Q L DL++ P+++
Sbjct: 122 GGFIRQVIRSLKVSCLPKNIPESFSLDIRNVGIGQSKLLSDLEIPPSVR 170
>gi|160900866|ref|YP_001566448.1| 50S ribosomal protein L25/general stress protein Ctc [Delftia
acidovorans SPH-1]
gi|226736305|sp|A9BP18.1|RL25_DELAS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|160366450|gb|ABX38063.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Delftia
acidovorans SPH-1]
Length = 209
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGG--NKRLISVQTNQIRKLVGHLGR 111
+A RA GT S + R +G+ P IV+ GG +LI + N L L +
Sbjct: 3 FVAFERAKQGTGASRRLRNSGKAPGIVY-------GGAAEAQLIEIDHN---ALWHALKK 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + D+EV + +V+ R V H L+V F R + + + VP
Sbjct: 53 EVFHSSILDMEVNGQTS--------KVVLRDVQFHPYKQLILHVDFQRVDDKTKVHLKVP 104
Query: 172 LVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSEL 216
L F G + S ++ + + + + +C +P +I VDLS L
Sbjct: 105 LHFEGMEQSQAVKVENCTITPLVHELDVVCMPAQLPEFITVDLSGL 150
>gi|192359843|ref|YP_001981164.1| 50S ribosomal protein L25/general stress protein Ctc [Cellvibrio
japonicus Ueda107]
gi|226736293|sp|B3PJN6.1|RL25_CELJU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|190686008|gb|ACE83686.1| ribosomal protein L25, Ctc-form [Cellvibrio japonicus Ueda107]
Length = 203
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R A +VP+I++ GG+K ++V + +L+ HL F S + DL + S
Sbjct: 25 RLADQVPAIIY-------GGSKAPVNVSVSH-NELLKHLQHEAFFSHVIDLNIDGTSES- 75
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLR-KGGYL 189
V+ + V H L++ FLR L VPL F + S G++ +GG +
Sbjct: 76 -------VILKDVQRHPSKAQVLHLDFLRVDKNTKLHKQVPLHFINEATSVGVKTQGGKV 128
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+ C +P +I+VDL+ ++ Q + DLK+
Sbjct: 129 VHNLTQLDVTCLPQDLPEFIEVDLAAIEAGQILHISDLKL 168
>gi|333912831|ref|YP_004486563.1| 50S ribosomal protein L25 [Delftia sp. Cs1-4]
gi|333743031|gb|AEF88208.1| 50S ribosomal protein L25 [Delftia sp. Cs1-4]
Length = 209
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGG--NKRLISVQTNQIRKLVGHLGR 111
+A RA GT S + R +G+ P IV+ GG +LI + N L L +
Sbjct: 3 FVAFERAKQGTGASRRLRNSGKAPGIVY-------GGAAEAQLIEIDHN---ALWHALKK 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + D+EV + +V+ R V H L+V F R + + + VP
Sbjct: 53 EVFHSSILDMEVNGQTS--------KVVLRDVQFHPYKQLILHVDFQRVDDKTKVHLKVP 104
Query: 172 LVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSEL 216
L F G + S ++ + + + + +C +P +I VDLS L
Sbjct: 105 LHFEGMEQSQAVKVENCTITPLVHELDVVCMPAQLPEFITVDLSGL 150
>gi|347820357|ref|ZP_08873791.1| 50S ribosomal protein L25/general stress protein Ctc
[Verminephrobacter aporrectodeae subsp. tuberculatae
At4]
Length = 216
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 17/178 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
+A RA GT S + R +G+ P IV+ GG+ ++ + L L +
Sbjct: 2 NFVAFERAKQGTGASRRLRNSGKTPGIVY-------GGSVEPQRIEVDH-NALWHALKKE 53
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F S + D+E+ +VL R V H L++ F R + L + VPL
Sbjct: 54 AFHSSVLDMELAGTTS--------KVLLRDVQYHPYKQLVLHIDFQRVDEKTRLHMKVPL 105
Query: 173 VFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+ G + S ++ +N I + C +P +I VDLS+L+ + D+K+
Sbjct: 106 HYSGAEESSAVKVDKCMVNPIVNELDVTCMPSDLPEFIAVDLSKLEKGASLHLKDIKL 163
>gi|330818353|ref|YP_004362058.1| 50S ribosomal protein L25 [Burkholderia gladioli BSR3]
gi|327370746|gb|AEA62102.1| 50S ribosomal protein L25 [Burkholderia gladioli BSR3]
Length = 204
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 22/210 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R GT S + R AG+ IV+ E ++I + N + L +
Sbjct: 3 VVAFERTLQGTGASRRLRNAGKTTGIVYGGE-----AAPQMIELDHNALWHA---LKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DLEV + VL R V H L+V F R L VP+
Sbjct: 55 FHSSILDLEVAGK--------SQNVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPVH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F +VSP ++ ++ + + C +P +++VDLS+L+ Q + A D+ +
Sbjct: 107 FLNAEVSPAVKLSSAVVSHVVVELDIECLPAALPEFLEVDLSKLEAGQSVHAKDIVLPNG 166
Query: 233 LKLLRSKD--EPVCKIA---GGRASDQKKS 257
+ L+ D PV A G SD+ +
Sbjct: 167 VSLVAHVDAENPVIATATIPAGAVSDEAAA 196
>gi|294627824|ref|ZP_06706403.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292597738|gb|EFF41896.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 211
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 22/192 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G S + R AG +P+IV+ GG +S+Q N + + F+ S +
Sbjct: 12 RADEGKGASRRLRHAGVIPAIVY-------GGELEPVSIQLNHEQIWLAQQNEWFY-SSI 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
DL + +VL R + H +++ F R L VPL F +
Sbjct: 64 LDLNLNGGVQ--------QVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEA 115
Query: 179 VSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPA 232
SP + + T + V+ +C +P +I+VDL L+V I ++K+ P
Sbjct: 116 SSPAGKSSEVVVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEIPE 175
Query: 233 LKLLRSKDEPVC 244
LKL + D V
Sbjct: 176 LKLGKEHDVAVV 187
>gi|424842939|ref|ZP_18267564.1| ribosomal protein L25, Ctc-form [Saprospira grandis DSM 2844]
gi|395321137|gb|EJF54058.1| ribosomal protein L25, Ctc-form [Saprospira grandis DSM 2844]
Length = 196
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 23/201 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R++ G S + RK GR+P +V+ + H L +IR L+
Sbjct: 11 RSNLGKSSSRELRKEGRIPCVVYGNGENLHFTTTAL------EIRDLI------------ 52
Query: 119 FDLEVR-SEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
+ E+R + GD + V + + V H TD L++ F LK +VP+ G
Sbjct: 53 YTDELRKASIKLGD--KTVEAIVKDVQFHPVTDKILHMDFQAIVAGQTLKTEVPIRLVGS 110
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
S G + GG L R +K L + + YI D+S LD+ + + D++V ++++
Sbjct: 111 --SKGQKVGGTLVQKMRKLKVLIQPESLCAYIPADVSPLDLGKSMRVRDIQVTEGIEIMT 168
Query: 238 SKDEPVCKIAGGRASDQKKSK 258
+ PV + RA +SK
Sbjct: 169 NSSIPVASVDIPRALRSAQSK 189
>gi|332798112|ref|YP_004459611.1| 50S ribosomal protein L25 [Tepidanaerobacter acetatoxydans Re1]
gi|438001015|ref|YP_007270758.1| LSU ribosomal protein L25p [Tepidanaerobacter acetatoxydans Re1]
gi|332695847|gb|AEE90304.1| 50S ribosomal protein L25 [Tepidanaerobacter acetatoxydans Re1]
gi|432177809|emb|CCP24782.1| LSU ribosomal protein L25p [Tepidanaerobacter acetatoxydans Re1]
Length = 210
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 69 KERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFG 128
K ++ G+VP++V+ + G ISV ++ +++ G S L +LE+ E
Sbjct: 20 KLKREGKVPAVVYGK-----GYETTSISVDDKELSRILKSRGES----SLINLELNGE-- 68
Query: 129 SGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGY 188
VL ++V + ++ +V F + + ++ ++P+V +GD + G+++GG
Sbjct: 69 ------AFPVLIKEVQRNVLKNSMEHVDFFKVSMDEEVEYNLPIVLKGD--AKGVKEGGV 120
Query: 189 LNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAG 248
L KR V + + I++D+S++D+ + DLK+ +L DE + +
Sbjct: 121 LQHQKREVAVKSLPNDMLDNIEIDISDMDIGDTLTVADLKIGDKNTVLDDPDEVIVSVLA 180
Query: 249 GR 250
R
Sbjct: 181 PR 182
>gi|194364505|ref|YP_002027115.1| 50S ribosomal protein L25/general stress protein Ctc
[Stenotrophomonas maltophilia R551-3]
gi|194347309|gb|ACF50432.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Stenotrophomonas maltophilia R551-3]
Length = 206
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R AG +P+IV+ GGN ++V + + F+ S + DL + +
Sbjct: 24 RHAGVIPAIVY-------GGNAEPVAVSLDHNEIWLAQQNEWFYAS-ILDLNLDGQVQ-- 73
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
+VL R + H +++ FLR L VPL F +D SP + +
Sbjct: 74 ------KVLLRDMQRHPYKQLIMHLDFLRVNENEKLTASVPLHFINEDTSPAGKAADVVV 127
Query: 191 TIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPALKLLRSKDEPVC 244
+ + V C +P I+VDL EL + D+K+ PAL L + D+ +
Sbjct: 128 AHELKEVSISCLPKDLPESIEVDLGELKAGDIVYLSDIKLPKGVEIPALALGKDHDDAIV 187
Query: 245 KIAGGRA 251
G+
Sbjct: 188 TAKHGKG 194
>gi|187776969|ref|ZP_02993442.1| hypothetical protein CLOSPO_00513 [Clostridium sporogenes ATCC
15579]
gi|187775628|gb|EDU39430.1| ribosomal protein L25, Ctc-form [Clostridium sporogenes ATCC 15579]
Length = 178
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 67 SVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRS- 125
S K R+ G+VP I++ + N + VG + + +S++ + V
Sbjct: 14 SNKIRREGKVPGIIYGK--------------NLNNLMFEVGEIELNSMISQVGEHGVTDV 59
Query: 126 EFGSGD---LIEKVRVLP-RKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSP 181
+G D LI++V+ P +K +H + NVT L+ ++P++F GD++
Sbjct: 60 NYGGADYKVLIKEVQKDPVKKNVIHIDLE---NVT----NSSNLINAEIPILFSGDELI- 111
Query: 182 GLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDE 241
++KGG + K +VK CP + +P I +DLS+ ++ + DL++ + + S D
Sbjct: 112 -MKKGGVVQKEKNSVKVRCPEEKLPNNIMIDLSQYNIGKTFRISDLELGEDITFMESLDS 170
Query: 242 PVCKIAGG 249
+ I G
Sbjct: 171 TIASIFFG 178
>gi|371776149|ref|ZP_09482471.1| 50S ribosomal protein L25/general stress protein Ctc [Anaerophaga
sp. HS1]
Length = 194
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 89/197 (45%), Gaps = 22/197 (11%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R + G + + RK G++P +++ G K I L+ + F
Sbjct: 8 ATKRENLGKSATRQLRKEGKIPCVIY--------GGKETIHASA-----LLKDFNKLIFT 54
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
++ + + + +K V+ + V H TD ++ FL+ + + I++P+
Sbjct: 55 PKVHIINLDLDG------QKYNVIIQDVQYHPVTDNAIHADFLQVFDDKPITIEIPVKLN 108
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G ++ G++ GG L KR +K A +P +++D++ L + + I G+L ++L
Sbjct: 109 G--LAAGVKAGGKLTLEKRKLKVKGLAKNIPDILEIDVTNLGLGKSIQVGELNFEN-IEL 165
Query: 236 LRSKDEPVCKIAGGRAS 252
L S ++ V + RA+
Sbjct: 166 LNSSNQVVAAVKLTRAA 182
>gi|152985832|ref|YP_001350652.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa PA7]
gi|452877561|ref|ZP_21954837.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa VRFPA01]
gi|166223704|sp|A6VC67.1|RL25_PSEA7 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|150960990|gb|ABR83015.1| ribosomal protein L25, Ctc-form [Pseudomonas aeruginosa PA7]
gi|452185690|gb|EME12708.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa VRFPA01]
Length = 204
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 20/184 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R A +VP++++ GG+K SV T ++R++ L S + L V
Sbjct: 24 RNAAQVPAVIY-------GGDKEPQSV-TLELREIAKLLENEAAFSHVIALNVGGA---- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK-GGYL 189
K VL + + H ++ FLR + L VPL F +DV+ G+++ GG +
Sbjct: 72 ----KETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEDVAVGVKQAGGEI 127
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR---SKDEPVCKI 246
+ V+ C +P +I+VD++++++ Q + DLK ++L++ D V I
Sbjct: 128 SHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQLAHGNDLAVANI 187
Query: 247 AGGR 250
R
Sbjct: 188 HASR 191
>gi|209523976|ref|ZP_03272528.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrospira
maxima CS-328]
gi|376003832|ref|ZP_09781633.1| 50S ribosomal protein L25 (General stress protein CTC) [Arthrospira
sp. PCC 8005]
gi|423063705|ref|ZP_17052495.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrospira
platensis C1]
gi|209495648|gb|EDZ95951.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrospira
maxima CS-328]
gi|375327774|emb|CCE17386.1| 50S ribosomal protein L25 (General stress protein CTC) [Arthrospira
sp. PCC 8005]
gi|406715137|gb|EKD10295.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrospira
platensis C1]
Length = 201
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 83/187 (44%), Gaps = 19/187 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P++++ G G +++ L + + L L +
Sbjct: 20 RREGLIPAVLY----GHKGAESEELTIDAKSAENL---MKKGAVNHTLIQLNIP------ 66
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK-GGYL 189
DL + L R+V H P +++F +++ +PL F G+ + G++ GG L
Sbjct: 67 DLSWAGKALLREVQTHPWKGFPYHLSFFSVGTLESVEVTIPLNFIGEPI--GVKNSGGML 124
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI--- 246
+ + V+ C +P IDV++S L+V + +L++ ++++ D+ V I
Sbjct: 125 DLVITEVQVNCKPGNIPEAIDVEVSSLEVGDALHISELQLPEGVEVIAEADQVVASILYR 184
Query: 247 AGGRASD 253
GG+A D
Sbjct: 185 GGGQAED 191
>gi|153938247|ref|YP_001392394.1| 50S ribosomal protein L25 [Clostridium botulinum F str. Langeland]
gi|384463368|ref|YP_005675963.1| 50S ribosomal protein L25 [Clostridium botulinum F str. 230613]
gi|152934143|gb|ABS39641.1| 50S ribosomal protein L25 [Clostridium botulinum F str. Langeland]
gi|295320385|gb|ADG00763.1| 50S ribosomal protein L25 [Clostridium botulinum F str. 230613]
Length = 178
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 24/186 (12%)
Query: 67 SVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGRSFFVSRLFDLEVR 124
S K R+ G+VP IV+ G++ N + ++ N + VG G + D +V
Sbjct: 14 SNKVRRDGKVPGIVY----GKNLNNLMFEVGEIELNNMISQVGEHGVTDINYEGTDYKV- 68
Query: 125 SEFGSGDLIEKVRVLP-RKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGL 183
LI++V+ P +K +H + NVT L+ ++P++F GD++ +
Sbjct: 69 -------LIKEVQKDPVKKNVIHIDLE---NVT----NSSNLINAEIPILFSGDELI--M 112
Query: 184 RKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPV 243
+KGG + K +VK CP + +P I VDLS+ D+ + DL++ + + + D +
Sbjct: 113 KKGGVVQKEKNSVKVRCPEEKLPNNIMVDLSQYDIGKTFRISDLELGEDITFMENLDSTI 172
Query: 244 CKIAGG 249
I G
Sbjct: 173 VSIFFG 178
>gi|373486557|ref|ZP_09577230.1| LSU ribosomal protein L25P [Holophaga foetida DSM 6591]
gi|372011418|gb|EHP12013.1| LSU ribosomal protein L25P [Holophaga foetida DSM 6591]
Length = 209
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 32/206 (15%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLG 110
+ETI+ PR G + R A +P++++ G N+ +S+ + K+V +
Sbjct: 3 EETIVVTPREKVGKNATRDLRNASLIPAVIY-------GLNEPTVSIAISP--KVVARI- 52
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVR--------VLPRKVHLHSGTDAPLNVTFLRAPP 162
+ SE G LI R V+ + + T +V F+R P
Sbjct: 53 ------------IASESGMNSLINMQREGTDIKRHVIIKDLQRDPVTGRLSHVDFMRVDP 100
Query: 163 EALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
+++ PLV +G+ + G+++GG L+ R V+ C +P +ID++++ + + +
Sbjct: 101 THKVRVKAPLVLKGNPI--GVKEGGILDFTHREVEVECLPAFIPGHIDINVAGMRIGDTL 158
Query: 223 LAGDLKVHPALKLLRSKDEPVCKIAG 248
+ L ++ +C I G
Sbjct: 159 RVDQVTFDTHLTIIGDTHNVICTIQG 184
>gi|110833378|ref|YP_692237.1| 50S ribosomal protein L25 [Alcanivorax borkumensis SK2]
gi|123050701|sp|Q0VS83.1|RL25_ALCBS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|110646489|emb|CAL15965.1| 50S ribosomal protein L25 [Alcanivorax borkumensis SK2]
Length = 214
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 22/178 (12%)
Query: 75 RVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIE 134
RVP I++ E ++ISV+ +++K L F S + L++
Sbjct: 29 RVPGILYGGE-----AEPQMISVELRELKKA---LENEAFYSHILTLKLDGA-------- 72
Query: 135 KVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK-GGYLNTIK 193
V+ + R + H PL+V LR + + VPL F ++ S G++K GG +
Sbjct: 73 DVQAVLRDMQRHPAKGHPLHVDLLRVDKTHKITMSVPLHFTNEESSIGVKKQGGEIQHNF 132
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR-----SKDEPVCKI 246
V+ C +P +I+VD++ +++ + DLK+ ++L + D+PV +
Sbjct: 133 AEVEVSCLPQHLPEFIEVDMANAELDSVVHLSDLKLPKGVELTQLALGEDHDQPVAAV 190
>gi|319940809|ref|ZP_08015148.1| 50S ribosomal protein L25 [Sutterella wadsworthensis 3_1_45B]
gi|319805691|gb|EFW02472.1| 50S ribosomal protein L25 [Sutterella wadsworthensis 3_1_45B]
Length = 214
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A R + GT S + R+A ++P I++ GG ++ + L +
Sbjct: 3 VIATTRTTQGTGASRRLRRADKLPGIIY-------GGKNPATPIELEH-NPIFFALRKEK 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + +E+ D E++ VL R +H +++ F R P+ ++ + VPL
Sbjct: 55 FHASILTMEL-------DGKEELVVL-RDFQMHPYKQQVMHIDFQRIAPDEVVTMRVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F G+++SP ++ ++ V+ C +P +I VDLS+++ + A DL V
Sbjct: 107 FSGEELSPAVKIDKCIISRATAYVEVACLPRDLPEFIAVDLSKMETGTTLHATDLVVPEG 166
Query: 233 LKLL 236
+K++
Sbjct: 167 VKMV 170
>gi|425444328|ref|ZP_18824382.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 9443]
gi|389730312|emb|CCI05393.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 9443]
Length = 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P++++ G +G + V L L ++ + L D+ V +G
Sbjct: 20 RRQGLIPAVLY----GHNGTESVSLVVGEKAALTL---LKKASVNNTLVDVNVPEMPWTG 72
Query: 131 D-LIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYL 189
LI++V+ P K +L+ +++F L I VP+ G+ + G ++GG +
Sbjct: 73 KALIQEVQSHPWKRNLY-------HLSFFSVSAHGKLDIVVPIKAIGEAI--GTKQGGLI 123
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEP 242
V C AD +P I+ D+S + V Q +L GDLK+ + L KD+P
Sbjct: 124 EQFVNEVNVSCIADNIPEVIEFDVSGIGVGQSLLVGDLKMPEGVTL---KDDP 173
>gi|118603027|ref|YP_904242.1| 50S ribosomal protein L25P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|166223716|sp|A1AXW4.1|RL25_RUTMC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|118567966|gb|ABL02771.1| LSU ribosomal protein L25P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 222
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI A+ R G S + R+ ++P+IV+ G R I++
Sbjct: 4 TINALTRDDQGKGASHRLRRNHKIPAIVYGT-----GKAPRNITLDV------------- 45
Query: 113 FFVSRLFDLEVRSEFGSGDLI---EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
F ++RL + E S DLI +K V+ + + H + +V FLR + +
Sbjct: 46 FEITRLLENE-ESYTSVLDLIVDKKKEAVIIKDLQRHPAKNIVTHVDFLRINLKQAIVTS 104
Query: 170 VPLVFRGDDVSPGLRKGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKI 222
VPL F G++ + +R G LN +V+ C P D+ P IDVD+S L + + I
Sbjct: 105 VPLHFNGEENNEAMRLGAILNQFVTSVEVSCLPTDL-PHAIDVDISNLTMGEHI 157
>gi|390441616|ref|ZP_10229659.1| 50S ribosomal protein L25 [Microcystis sp. T1-4]
gi|422302405|ref|ZP_16389768.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 9806]
gi|425455645|ref|ZP_18835360.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 9807]
gi|389788401|emb|CCI15991.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 9806]
gi|389803435|emb|CCI17643.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 9807]
gi|389835082|emb|CCI33785.1| 50S ribosomal protein L25 [Microcystis sp. T1-4]
Length = 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P++++ G +G + V L L ++ + L D+ V +G
Sbjct: 20 RRQGLIPAVLY----GHNGTESVSLVVGEKAALTL---LKKASVNNTLVDVNVPEMPWTG 72
Query: 131 D-LIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYL 189
LI++V+ P K +L+ +++F L I VP+ G+ + G ++GG +
Sbjct: 73 KALIQEVQSHPWKRNLY-------HLSFFSVSAHGKLDIVVPIKAIGEAI--GTKQGGLI 123
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEP 242
V C AD +P I+ D+S + V Q +L GDLK+ + L KD+P
Sbjct: 124 EQFVNEVNVSCIADNIPEVIEFDVSGIGVGQSLLVGDLKMPEGVTL---KDDP 173
>gi|119357476|ref|YP_912120.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium
phaeobacteroides DSM 266]
gi|166223674|sp|A1BH19.1|RL25_CHLPD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|119354825|gb|ABL65696.1| LSU ribosomal protein L25P [Chlorobium phaeobacteroides DSM 266]
Length = 198
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 27/187 (14%)
Query: 67 SVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQI--RKLVGHLGRSFFVSRLFDLEVR 124
+ K RK G VP++++ H G + ISV N+I +KLV H S + DL+
Sbjct: 18 AAKLRKTGIVPAVIY------HKGEET-ISVSVNEIALKKLV-HSAES----HIIDLK-- 63
Query: 125 SEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLR 184
F G + VR + V TD ++ F + L+++DVP+ GD V G+
Sbjct: 64 --FPDG---KTVRSFIKDVQFDPVTDRIIHTDFQLFSADELVEMDVPVGTTGDAV--GVE 116
Query: 185 KGGYLNTIKRTVKFL-CPADIVPPYIDVDLSELDVEQKILAGD--LKVHPALKLLRSKDE 241
KGG + IK + PAD+ P + +D + L++ I + + P L ++ D
Sbjct: 117 KGGRIQIIKHALTLKGMPADM-PDHFLIDCTNLEIGHSIHVREIPMDARPGLTIMDDPDT 175
Query: 242 PVCKIAG 248
PV I
Sbjct: 176 PVVTIVA 182
>gi|373499864|ref|ZP_09590260.1| 50S ribosomal protein L25, Ctc-form [Prevotella micans F0438]
gi|371956102|gb|EHO73897.1| 50S ribosomal protein L25, Ctc-form [Prevotella micans F0438]
Length = 210
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
E+ + +++ H TDA L+V F + + + VP+ G ++ G+R GG +N
Sbjct: 73 ERHTAVMKELQFHPVTDALLHVDFYEVNDQKPIVMGVPVKLIG--LAQGVRDGGRMNMSI 130
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRAS 252
R + P +P ++D+D+++L + + I G+L L+++ + VC I R S
Sbjct: 131 RKINVRAPYQQIPEHLDIDVTKLTLGKSIKVGELSFE-GLEMITPSEVVVCSIKTTRNS 188
>gi|365120463|ref|ZP_09338050.1| ribosomal protein L25, Ctc-form [Tannerella sp. 6_1_58FAA_CT1]
gi|363647518|gb|EHL86733.1| ribosomal protein L25, Ctc-form [Tannerella sp. 6_1_58FAA_CT1]
Length = 216
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 16/157 (10%)
Query: 96 SVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNV 155
+V T +RKLV + +F +++ GD +K + + + + H TDA L++
Sbjct: 67 TVSTESVRKLV-------YTPEIFAIDLTI----GD--KKTKAVIKDIQFHPVTDAILHM 113
Query: 156 TFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSE 215
FL + + ++VP+ G S G++ GG L+ R +K +P + +++
Sbjct: 114 DFLEVNEQKPIIMEVPVALEGH--SEGVKAGGKLSLEMRKLKVKAIYSQIPEKLVINIDN 171
Query: 216 LDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRAS 252
L + + I G+L L+L+ +K+ VC + RA+
Sbjct: 172 LGLGKTIQVGELHFE-GLELMNAKNAVVCAVKLTRAA 207
>gi|334144463|ref|YP_004537619.1| 50S ribosomal protein L25 [Thioalkalimicrobium cyclicum ALM1]
gi|333965374|gb|AEG32140.1| 50S ribosomal protein L25 [Thioalkalimicrobium cyclicum ALM1]
Length = 193
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R++ G S + R G++P I++ GG+K +SV L +F L
Sbjct: 10 RSTEGKGASRRLRHTGQIPGIIY-------GGDKDAVSVT----------LDANFVKKTL 52
Query: 119 FDLEVRSEFGSGDL--IEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
+ ++ + + D+ K V+ + + H +++ R + VP+ F G
Sbjct: 53 MNNDIYNTILTVDVEGASKESVVIKDMQRHPARADVMHIDLQRVTDNGRVVKRVPIKFVG 112
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+PG++ GG + ++TV+ C A +P I++D+S ++ + + DL++
Sbjct: 113 SAKAPGVKLGGLMTFFQKTVEVRCSAKNLPTAIEIDVSGMEAGESLRLSDLQL 165
>gi|386717193|ref|YP_006183519.1| 50S ribosomal protein L25 [Stenotrophomonas maltophilia D457]
gi|408822214|ref|ZP_11207104.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
geniculata N1]
gi|384076755|emb|CCH11340.1| LSU ribosomal protein L25p [Stenotrophomonas maltophilia D457]
Length = 205
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 22/186 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R AG +P+IV+ GGN +++ + + F+ S + DL + +
Sbjct: 24 RHAGVIPAIVY-------GGNAEPVAISLDHNEIWLAQQNEWFYAS-ILDLNLDGQVQ-- 73
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
+VL R + H +++ F R L VPL F +D SP + +
Sbjct: 74 ------KVLLRDMQRHPYKQLIMHLDFQRVNENEALTASVPLHFVNEDTSPAGKAADVVV 127
Query: 191 TIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPALKLLRSKDEPVC 244
T + + V C +P I+VDL EL + ++K+ PAL L + D+ +
Sbjct: 128 THELKEVTITCLPKDLPESIEVDLGELKAGDVVYLSNIKLPKGVEIPALALGKDHDDAIV 187
Query: 245 KIAGGR 250
G+
Sbjct: 188 TAKAGK 193
>gi|350564647|ref|ZP_08933464.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalimicrobium aerophilum AL3]
gi|349777666|gb|EGZ32029.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalimicrobium aerophilum AL3]
Length = 193
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R++ G S + R G++P I++ GG+K +SV L +F L
Sbjct: 10 RSTEGKGASRRLRHTGQIPGIIY-------GGDKDAVSVT----------LDANFVKKAL 52
Query: 119 FDLEVRSEFGSGDL--IEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
+ ++ + + D+ + V+ + + H +++ R + VP+ F G
Sbjct: 53 MNNDIYNTILTVDVEGASQENVVIKDMQRHPARADVMHIDLQRVTDNGRVVKRVPIKFAG 112
Query: 177 DDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+PG++ GG + ++TV+ C A +P I++D+S ++ + + DL++
Sbjct: 113 AAKAPGVKLGGLMTFFQKTVEIRCSAKNLPTAIEIDVSTMEAGESLRLSDLQL 165
>gi|260912295|ref|ZP_05918846.1| 50S ribosomal protein L25 [Prevotella sp. oral taxon 472 str.
F0295]
gi|260633596|gb|EEX51735.1| 50S ribosomal protein L25 [Prevotella sp. oral taxon 472 str.
F0295]
Length = 200
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSR 117
R++ G + S + RK G +P ++ ++ G + L +V ++RK+V +
Sbjct: 11 RSNLGKKASKEMRKEGLIPCNLYGEKKNADGQPEALSFAVPMAELRKVV-------YTPH 63
Query: 118 LF--DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
++ +L++ + K + +++ H TDA L+ F E + I +P+
Sbjct: 64 IYVVNLDIDGQ--------KHTAIMKELQFHPVTDALLHADFYEINEEKSIAIGIPVNLV 115
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G ++ G+R GG L+ R + P +P +D+D++ L + + I AG++ L++
Sbjct: 116 G--LAQGVRDGGRLSLSIRKLVVKAPYKQIPEKLDIDVTALTIGKSIKAGEVSFE-GLEV 172
Query: 236 LRSKDEPVCKI 246
+ KD VC +
Sbjct: 173 VTPKDVIVCTV 183
>gi|256821850|ref|YP_003145813.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Kangiella
koreensis DSM 16069]
gi|256795389|gb|ACV26045.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kangiella
koreensis DSM 16069]
Length = 229
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFG 128
R+A ++P+IV+ GG + + IS+ NQI + L S + L++
Sbjct: 24 READQIPAIVY-------GGKEEPKSISLNHNQI---INMLDEEAVYSSIIKLDI----- 68
Query: 129 SGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGY 188
+G + E V+ + + H+ L++ R ++ +V L F + +PG++ GG
Sbjct: 69 AGKVEE---VVIKDIQRHAYKPKVLHMDLKRIVRGEIMNANVALHFINEKSAPGVKAGGI 125
Query: 189 LNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
++ +V+ C +P YI+VDL L++ + I DLK+ ++L
Sbjct: 126 VSHQVTSVEVACRPRNLPEYIEVDLGALEIGETIHLSDLKLPEGVEL 172
>gi|163858319|ref|YP_001632617.1| 50S ribosomal protein L25 [Bordetella petrii DSM 12804]
gi|226736285|sp|A9I6W5.1|RL25_BORPD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|163262047|emb|CAP44349.1| 50S ribosomal protein L25 [Bordetella petrii]
Length = 207
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 17/162 (10%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ G+ S + R+AGRVP+IV+ GG+ ++++ + ++ L + F
Sbjct: 5 ATARSVQGSSASRRLRRAGRVPAIVY-------GGSAAPLNIELDH-NEIYHALRKEEFH 56
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ + +++ ++ VL R V H+ L+V F R L VPL F
Sbjct: 57 ASILQMQLDG--------KEEAVLLRSVQWHAYKPQVLHVDFQRVDANQALHTKVPLHFI 108
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSEL 216
+ SP ++ ++ + ++ C +P YI+VDL L
Sbjct: 109 NGENSPAVKLSSAIISHVVTELEITCLPAALPQYIEVDLGNL 150
>gi|49089156|gb|AAT51649.1| PA4671, partial [synthetic construct]
Length = 205
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 20/184 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R AG VP++V+ GG+K SV T ++R++ L S + L V
Sbjct: 24 RNAGLVPAVVY-------GGDKEPQSV-TLELREIAKLLENEAAFSHVIALNVGGA---- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK-GGYL 189
K VL + + H ++ FLR + L VPL F ++V+ G+++ GG +
Sbjct: 72 ----KETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGVKQAGGEI 127
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR---SKDEPVCKI 246
+ V+ C +P +I+VD++++++ Q + DLK ++L++ D V I
Sbjct: 128 SHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQLAHGNDLAVANI 187
Query: 247 AGGR 250
R
Sbjct: 188 HASR 191
>gi|15599866|ref|NP_253360.1| 50S ribosomal protein L25 [Pseudomonas aeruginosa PAO1]
gi|107099662|ref|ZP_01363580.1| hypothetical protein PaerPA_01000680 [Pseudomonas aeruginosa PACS2]
gi|218893768|ref|YP_002442637.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa LESB58]
gi|254238589|ref|ZP_04931912.1| hypothetical protein PACG_04744 [Pseudomonas aeruginosa C3719]
gi|254244437|ref|ZP_04937759.1| hypothetical protein PA2G_05295 [Pseudomonas aeruginosa 2192]
gi|386060828|ref|YP_005977350.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa M18]
gi|392986340|ref|YP_006484927.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa DK2]
gi|416855501|ref|ZP_11911532.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa 138244]
gi|418588025|ref|ZP_13152042.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa MPAO1/P1]
gi|418590132|ref|ZP_13154047.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa MPAO1/P2]
gi|419754581|ref|ZP_14280941.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa PADK2_CF510]
gi|420141859|ref|ZP_14649498.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa CIG1]
gi|421156097|ref|ZP_15615551.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa ATCC 14886]
gi|421163230|ref|ZP_15621957.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa ATCC 25324]
gi|421182733|ref|ZP_15640205.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa E2]
gi|421519229|ref|ZP_15965901.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa PAO579]
gi|71153159|sp|Q9HVC4.1|RL25_PSEAE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736352|sp|B7V0L7.1|RL25_PSEA8 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|9950927|gb|AAG08058.1|AE004881_1 probable ribosomal protein L25 [Pseudomonas aeruginosa PAO1]
gi|126170520|gb|EAZ56031.1| hypothetical protein PACG_04744 [Pseudomonas aeruginosa C3719]
gi|126197815|gb|EAZ61878.1| hypothetical protein PA2G_05295 [Pseudomonas aeruginosa 2192]
gi|218773996|emb|CAW29811.1| probable ribosomal protein L25 [Pseudomonas aeruginosa LESB58]
gi|334842858|gb|EGM21457.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa 138244]
gi|347307134|gb|AEO77248.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa M18]
gi|375041165|gb|EHS33878.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa MPAO1/P1]
gi|375051083|gb|EHS43556.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa MPAO1/P2]
gi|384398994|gb|EIE45397.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa PADK2_CF510]
gi|392321845|gb|AFM67225.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa DK2]
gi|403245416|gb|EJY59233.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa CIG1]
gi|404346214|gb|EJZ72565.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa PAO579]
gi|404519476|gb|EKA30228.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa ATCC 14886]
gi|404529478|gb|EKA39514.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa ATCC 25324]
gi|404541479|gb|EKA50836.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa E2]
gi|453042721|gb|EME90460.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa PA21_ST175]
Length = 204
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 20/184 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R AG VP++V+ GG+K SV T ++R++ L S + L V
Sbjct: 24 RNAGLVPAVVY-------GGDKEPQSV-TLELREIAKLLENEAAFSHVIALNVGGA---- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK-GGYL 189
K VL + + H ++ FLR + L VPL F ++V+ G+++ GG +
Sbjct: 72 ----KETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGVKQAGGEI 127
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR---SKDEPVCKI 246
+ V+ C +P +I+VD++++++ Q + DLK ++L++ D V I
Sbjct: 128 SHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQLAHGNDLAVANI 187
Query: 247 AGGR 250
R
Sbjct: 188 HASR 191
>gi|425459350|ref|ZP_18838836.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 9808]
gi|389822967|emb|CCI29228.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 9808]
Length = 185
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P++++ G +G + V L L ++ + L D+ V +G
Sbjct: 20 RRQGFIPAVLY----GHNGTESVSLVVGEKAALTL---LKKASVNNTLVDVNVPEMPWTG 72
Query: 131 D-LIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYL 189
LI++V+ P K +L+ +++F L I VP+ G+ + G ++GG +
Sbjct: 73 KALIQEVQSHPWKRNLY-------HLSFFSVSAHGKLDIVVPIKAIGEAI--GTKQGGLI 123
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEP 242
V C AD +P I+ D+S + V Q +L GDLK+ + L KD+P
Sbjct: 124 EQFVNEVNVSCIADNIPEVIEFDVSGIGVGQSLLVGDLKMPEGVTL---KDDP 173
>gi|116052816|ref|YP_793133.1| 50S ribosomal protein L25 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296391492|ref|ZP_06880967.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa PAb1]
gi|313107333|ref|ZP_07793528.1| putative ribosomal protein L25 [Pseudomonas aeruginosa 39016]
gi|355652201|ref|ZP_09056636.1| 50S ribosomal protein L25, Ctc-form [Pseudomonas sp. 2_1_26]
gi|416874252|ref|ZP_11918021.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa 152504]
gi|421170456|ref|ZP_15628408.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa ATCC 700888]
gi|421176924|ref|ZP_15634582.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa CI27]
gi|424944552|ref|ZP_18360315.1| probable ribosomal protein L25 [Pseudomonas aeruginosa NCMG1179]
gi|451985063|ref|ZP_21933294.1| LSU ribosomal protein L25p [Pseudomonas aeruginosa 18A]
gi|122257173|sp|Q02G03.1|RL25_PSEAB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|115588037|gb|ABJ14052.1| putative ribosomal protein L25 [Pseudomonas aeruginosa UCBPP-PA14]
gi|310880030|gb|EFQ38624.1| putative ribosomal protein L25 [Pseudomonas aeruginosa 39016]
gi|334843656|gb|EGM22242.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa 152504]
gi|346060998|dbj|GAA20881.1| probable ribosomal protein L25 [Pseudomonas aeruginosa NCMG1179]
gi|354824409|gb|EHF08660.1| 50S ribosomal protein L25, Ctc-form [Pseudomonas sp. 2_1_26]
gi|404523394|gb|EKA33818.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa ATCC 700888]
gi|404530294|gb|EKA40301.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa CI27]
gi|451757237|emb|CCQ85817.1| LSU ribosomal protein L25p [Pseudomonas aeruginosa 18A]
Length = 204
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 20/184 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R AG VP++V+ GG+K SV T ++R++ L S + L V
Sbjct: 24 RNAGLVPAVVY-------GGDKEPQSV-TLELREIAKLLENEAAFSHVIALNVGGA---- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK-GGYL 189
K VL + + H ++ FLR + L VPL F ++V+ G+++ GG +
Sbjct: 72 ----KETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGVKQSGGEI 127
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR---SKDEPVCKI 246
+ V+ C +P +I+VD++++++ Q + DLK ++L++ D V I
Sbjct: 128 SHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQLAHGNDLAVANI 187
Query: 247 AGGR 250
R
Sbjct: 188 HASR 191
>gi|91787188|ref|YP_548140.1| 50S ribosomal protein L25/general stress protein Ctc [Polaromonas
sp. JS666]
gi|123165230|sp|Q12E00.1|RL25_POLSJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91696413|gb|ABE43242.1| LSU ribosomal protein L25P [Polaromonas sp. JS666]
Length = 227
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
+A RA GT S + R GR P IV+ G LI + N + + +
Sbjct: 3 FVAFERAKQGTGASRRLRITGRTPGIVYGGT-----GEPSLIELDHNALWHAIK---KEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + ++E+ G EKV L R + +H L++ F R L + VPL
Sbjct: 55 FHASVLEMEM------GGKTEKV--LLRDLQMHPFKQQVLHIDFQRVDARTRLTMKVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
+ G++ SP ++ + +N + + C +P +ID++L L + D+ +
Sbjct: 107 YSGEEESPAVKVENCLVNHVLTELSISCLPKDLPEFIDINLGGLKKGTSLHVKDITLPKG 166
Query: 233 LKLLR--SKDEPV 243
+K + +D PV
Sbjct: 167 VKFVAKGGQDNPV 179
>gi|269468550|gb|EEZ80199.1| ribosomal protein L25/general stress protein Ctc [uncultured SUP05
cluster bacterium]
Length = 218
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 18/153 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ +VP+IV+ G + I++ ++I L L + + + DL + + S
Sbjct: 7 RREEKVPAIVYGA-----GKDPSAITLNIHEITHL---LEKDGAFTSVLDLAIDKKTES- 57
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
V+ + + H + +V LR + + ++PL F G+D + +R G LN
Sbjct: 58 -------VIIKDLQRHPAKNCITHVDLLRINMKQTITTNIPLNFIGEDDNEAMRLGAILN 110
Query: 191 TIKRTVKFLC-PADIVPPYIDVDLSELDVEQKI 222
TV+ C PAD+ P IDVD+S L++ I
Sbjct: 111 QFINTVEVSCLPADM-PNGIDVDISGLEIGDHI 142
>gi|406946700|gb|EKD77822.1| 50S ribosomal protein L25 [uncultured bacterium]
Length = 244
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R S G + + R+ RVP+I++ G IS+ N++ K + H
Sbjct: 9 AQARQSTGKPAARRLRREDRVPAILYGA-----GKEPMPISLSHNKVIKALEH---EAIY 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S + L V G+ + +V+ + + H +++ FLR + + + VPL F
Sbjct: 61 SHILTLNVE---GASE-----KVVLKALMRHPTKPKIMHMDFLRINTKEKIHMRVPLHFL 112
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKI 222
G+ SPGL+ GG L+ + ++ C P D+ P +I+VD+S L + I
Sbjct: 113 GEAKSPGLKDGGVLSKLITHLEITCLPLDL-PEFIEVDVSGLTIGDSI 159
>gi|304382452|ref|ZP_07364950.1| 50S ribosomal protein L25 [Prevotella marshii DSM 16973]
gi|304336405|gb|EFM02643.1| 50S ribosomal protein L25 [Prevotella marshii DSM 16973]
Length = 207
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 137 RVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTV 196
+ + +++ H TDA L+V F E + + +P+ G ++ G+R GG +N R +
Sbjct: 77 KAILKELQFHPVTDALLHVDFYEINEEKDITVGIPVKLTG--LAQGVRDGGRMNLSIRKI 134
Query: 197 KFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGR 250
P +P +++D++ L + + I G L L+++ SK+ VC + R
Sbjct: 135 NVRAPYKRIPEQLEIDVTPLQIGKSIKVGQLNFE-GLEIVTSKEVIVCSVKMTR 187
>gi|297568582|ref|YP_003689926.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfurivibrio alkaliphilus AHT2]
gi|296924497|gb|ADH85307.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfurivibrio alkaliphilus AHT2]
Length = 189
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+AGR P++++ + + +S+ T+ K + + R + + +LEV + G
Sbjct: 23 RRAGRTPAVLYGPQ-----MEPQALSLDTHTFTKALFSVHRR---NSVINLEVSDDGG-- 72
Query: 131 DLIEKVR-VLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYL 189
EK+ V+ R++ D L+ F + L VPL +RG + G+ GG L
Sbjct: 73 ---EKIHHVVTREIQTDPILDQVLHADFYVISLDEPLVFQVPLRYRGK--AKGVDMGGDL 127
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGG 249
T V A +P I+VD+S L ++ G+L + ++L++ KDE +AGG
Sbjct: 128 VTSLHKVSLKGKALDIPDDIEVDVSGLGPNSELTCGELSLPAGVELVQGKDEVCVAVAGG 187
>gi|384082302|ref|ZP_09993477.1| 50S ribosomal protein L25/general stress protein Ctc [gamma
proteobacterium HIMB30]
Length = 210
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R G VP+IV+ GG + S+Q + L L F S + LE+ +
Sbjct: 24 RLEGLVPAIVY-------GGKNKPKSIQLAH-KDLKRALEEESFYSSVITLEIDGK---- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLR-KGGYL 189
V+ + + H L+ F RA +LK++VP+ F + G++ +GG +
Sbjct: 72 ----DEPVILKALQRHPAKPLVLHADFQRASAGTVLKVNVPVHFLNETSCKGVKMQGGVI 127
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
+ ++ C +P +I+VDL+E++++Q I DLK
Sbjct: 128 HHDAVEIEVSCSPKDLPEFIEVDLAEVELDQVIHLSDLK 166
>gi|452824098|gb|EME31103.1| hypothetical protein Gasu_16030 [Galdieria sulphuraria]
Length = 292
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
++DL + ++ GS + K R + R LH P ++ F+R P L K+ +P+V D
Sbjct: 152 VYDLRIMTKDGSREW--KQRAVARHFDLHHIQLRPDSILFVRCIPNHLYKMRLPVVLLND 209
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPP-YIDVDLSELDVEQKILAGDLKVHPALKLL 236
D GLR G+L R V + PP + DL + KI DL V P +++
Sbjct: 210 DKCEGLRN-GHLIRYHRAVDVIAENIECPPAAVFADLGGKVADSKIFVRDLLVPPGVQIC 268
Query: 237 RSKDEPV 243
+D+ +
Sbjct: 269 EWQDKEM 275
>gi|298372822|ref|ZP_06982812.1| ribosomal protein L25, Ctc-form [Bacteroidetes oral taxon 274 str.
F0058]
gi|298275726|gb|EFI17277.1| ribosomal protein L25, Ctc-form [Bacteroidetes oral taxon 274 str.
F0058]
Length = 221
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 141 RKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLC 200
+ + LH TD L++ FL P+ + I+VP+V D + G+R GG LN I + +K
Sbjct: 98 KDLQLHPVTDEILHIDFLAVFPDIPMTIEVPVVL--DGFAAGVRAGGKLNLISKKLKVKG 155
Query: 201 PADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRAS 252
+ +P + +++ L++ + I L L LL + D VC +A R +
Sbjct: 156 LSKDIPEKLHINVENLELGKAIQIKHLNF-DNLTLLNAPDNVVCVVAVTRGA 206
>gi|42526848|ref|NP_971946.1| 50S ribosomal protein L25 [Treponema denticola ATCC 35405]
gi|449109576|ref|ZP_21746210.1| 50S ribosomal protein L25 [Treponema denticola ATCC 33520]
gi|449112089|ref|ZP_21748644.1| 50S ribosomal protein L25 [Treponema denticola ATCC 33521]
gi|449113107|ref|ZP_21749622.1| 50S ribosomal protein L25 [Treponema denticola ATCC 35404]
gi|449115688|ref|ZP_21752148.1| 50S ribosomal protein L25 [Treponema denticola H-22]
gi|449120254|ref|ZP_21756640.1| 50S ribosomal protein L25 [Treponema denticola H1-T]
gi|449122659|ref|ZP_21758992.1| 50S ribosomal protein L25 [Treponema denticola MYR-T]
gi|449126080|ref|ZP_21762374.1| 50S ribosomal protein L25 [Treponema denticola OTK]
gi|449131094|ref|ZP_21767311.1| 50S ribosomal protein L25 [Treponema denticola SP37]
gi|71153672|sp|Q73N16.1|RL25_TREDE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|41817163|gb|AAS11857.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Treponema
denticola ATCC 35405]
gi|448938794|gb|EMB19721.1| 50S ribosomal protein L25 [Treponema denticola OTK]
gi|448940440|gb|EMB21346.1| 50S ribosomal protein L25 [Treponema denticola SP37]
gi|448947649|gb|EMB28493.1| 50S ribosomal protein L25 [Treponema denticola MYR-T]
gi|448948398|gb|EMB29235.1| 50S ribosomal protein L25 [Treponema denticola H1-T]
gi|448955174|gb|EMB35941.1| 50S ribosomal protein L25 [Treponema denticola H-22]
gi|448956370|gb|EMB37131.1| 50S ribosomal protein L25 [Treponema denticola ATCC 33521]
gi|448958819|gb|EMB39547.1| 50S ribosomal protein L25 [Treponema denticola ATCC 33520]
gi|448960687|gb|EMB41396.1| 50S ribosomal protein L25 [Treponema denticola ATCC 35404]
Length = 211
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 27/195 (13%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R++ G +VK RKAGR+P++++++ G I V + KL + S V
Sbjct: 8 ANERSTYGKNAAVKMRKAGRIPAVMYDRH-----GKSVPIDVDEREFMKLFKLVTESTIV 62
Query: 116 SRLF---DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ D EV + D++ +D ++ F L+ V +
Sbjct: 63 TLNAAGKDYEVFIKDFQHDIV---------------SDKIKHIDFYEVERGKTLRTKVKI 107
Query: 173 VFRGDDVSP-GLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
G SP G+R GG L T ++ C +P I VD+S LDV Q + D+K+
Sbjct: 108 RLEG---SPEGVRHGGILETGITELELECLPKDLPARIIVDVSALDVNQSLHVRDIKLPE 164
Query: 232 ALKLLRSKDEPVCKI 246
A+ +L S D V I
Sbjct: 165 AVTVLTSDDITVAAI 179
>gi|379729131|ref|YP_005321327.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Saprospira
grandis str. Lewin]
gi|378574742|gb|AFC23743.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Saprospira
grandis str. Lewin]
Length = 195
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 23/201 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R++ G S + RK GR+P +V+ + H L +IR L+
Sbjct: 11 RSNLGKSSSRELRKEGRIPCVVYGNGENLHFTTTAL------EIRDLI------------ 52
Query: 119 FDLEVR-SEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
+ E+R + GD + V + + V H TD L++ F LK +VP+ G+
Sbjct: 53 YTDELRKASIKLGD--KTVEAIVKDVQFHPVTDKILHMDFQAIVAGQTLKTEVPIRLVGN 110
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
S G + GG L R +K L + + YI D++ LD+ + + D++V ++++
Sbjct: 111 --SKGQKVGGTLVQKMRKLKVLIQPESLCAYIPADVTPLDLGKSMRVRDIQVTEGIEIMT 168
Query: 238 SKDEPVCKIAGGRASDQKKSK 258
+ PV + RA +SK
Sbjct: 169 NGSIPVASVDIPRALRSAQSK 189
>gi|406934997|gb|EKD69094.1| 50S ribosomal protein L25 [uncultured bacterium]
Length = 223
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
+I A R S GT + K + GR+P+I++ + G ++++ + +
Sbjct: 5 SIKAEVRKSAGTSANNKLKTKGRIPAILYGR-----GKESTMLTLTKLDFENIFKKNNKR 59
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
S F+ + + LI+ ++ P K+ + +V F ++ VP+
Sbjct: 60 AIYSVNFN-DGAKDLVKNTLIKDIQYDPIKMRI-------THVDFYEYDENKKIRTRVPV 111
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
+ G + GL+KGG L IK V+ C +P + +VD++ LDV I DL V
Sbjct: 112 LTHGTPI--GLKKGGILTHIKDQVEIDCLPINIPDHFEVDVTNLDVHHTIRVSDLTVAKE 169
Query: 233 LKLLRSKDEPVCKIAGGRASDQK 255
+ ++ + + ++ R ++K
Sbjct: 170 IHVISDPHDVLITVSMPRIEEEK 192
>gi|443310324|ref|ZP_21039980.1| ribosomal protein L25, Ctc-form [Synechocystis sp. PCC 7509]
gi|442779603|gb|ELR89840.1| ribosomal protein L25, Ctc-form [Synechocystis sp. PCC 7509]
Length = 206
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 87/183 (47%), Gaps = 16/183 (8%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P+ ++ G G +++V+ + +L+ G + S + DL +
Sbjct: 20 RREGLIPASLY----GHKGTESIMLTVKAKTLEQLLKKAGVN---STVVDLNIP------ 66
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLR-KGGYL 189
DL + + L R+V +H +V+F + ++++VP+ F G+ +PG++ +GG L
Sbjct: 67 DLSWRGKTLLREVQIHPVKRWAYHVSFFALAAQESVEVEVPVHFVGE--APGVKMEGGVL 124
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGG 249
+ + ++ C +P I+VD+S L ++ + +L + + +L V +
Sbjct: 125 DVVLTELEVKCAPGSIPDAIEVDISGLHLKDILYVSELVLPAGITVLGDPGRTVASVVQS 184
Query: 250 RAS 252
R S
Sbjct: 185 RVS 187
>gi|333999131|ref|YP_004531743.1| 50S ribosomal protein L25, Ctc-form [Treponema primitia ZAS-2]
gi|333740870|gb|AEF86360.1| ribosomal protein L25, Ctc-form [Treponema primitia ZAS-2]
Length = 214
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 25/189 (13%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKL--VGHLGRSFFVS 116
RA G+ + + RK GR+P++V+ G + +S+ + + + V + S V+
Sbjct: 11 RAESGSAEARRTRKEGRIPAVVY-------GRTGKALSIDLDALEFINSVRGISESTIVT 63
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAP-LNVTFLRAPPEALLKIDVPLVFR 175
D + F V+ R + TD L+V F L+ V +
Sbjct: 64 INVDGQAHEAF--------VKDTQRNI-----TDGQILHVDFYEVERGVSLRAKVSVHVH 110
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G+ V G+R+GG L + ++ C +P IDVD++EL V Q I DLK+ ++L
Sbjct: 111 GNPV--GVREGGILESPLHDIEVECLPKDLPERIDVDIAELKVNQSIHVRDLKLGEGVRL 168
Query: 236 LRSKDEPVC 244
+ + D+ V
Sbjct: 169 ISNPDQVVA 177
>gi|338536292|ref|YP_004669626.1| 50S ribosomal protein L25/general stress protein Ctc [Myxococcus
fulvus HW-1]
gi|337262388|gb|AEI68548.1| 50S ribosomal protein L25/general stress protein Ctc [Myxococcus
fulvus HW-1]
Length = 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A PR G V+ + R G +P++V+ G+H +SV +R+ +
Sbjct: 7 TLEAKPREGSGKGVARRLRAQGLIPAVVY----GKHLEKPVHLSVDPKAVRQAIN----- 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F+ + + GD +VL + + T A L+ FL P +K++VPL
Sbjct: 58 --TPHKFNTLINIKVEGGDR----QVLLKDYQMEPVTRAILHADFLDVRPNEQVKVNVPL 111
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
V G + G+ GG L +R ++ +P I+VD++ + + + + D+K+
Sbjct: 112 VLTGR--AQGVADGGLLTQARREIEVWSLPASIPERIEVDVTPMKITEVLHINDVKL 166
>gi|198277115|ref|ZP_03209646.1| hypothetical protein BACPLE_03323 [Bacteroides plebeius DSM 17135]
gi|198269613|gb|EDY93883.1| ribosomal protein L25, Ctc-form [Bacteroides plebeius DSM 17135]
Length = 198
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 88/191 (46%), Gaps = 21/191 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGN-KRLISVQTNQIRKLVGHLGRSFFVSR 117
R G + + + RK VP +++ + ++G +V T +R LV +
Sbjct: 11 RTETGKKATRELRKDNGVPCVLYGTQKDENGNQVATHFTVPTEGLRNLV-------YTPH 63
Query: 118 LF--DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
++ DL + + V + + + H TD L+V F + + ++VP+
Sbjct: 64 IYVVDLNIDGKI--------VNAIMKDIQFHPVTDKILHVDFYQIDESKPIVMEVPVKLE 115
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G ++ G++ GG L R +K +++P + VD++ L + + I G+LK + L+L
Sbjct: 116 G--LAEGVKAGGKLALQIRKLKVKALYNVIPERLVVDVTPLGLGKTIKVGELK-YEGLEL 172
Query: 236 LRSKDEPVCKI 246
L +K+ VC +
Sbjct: 173 LNAKEAVVCAV 183
>gi|425440361|ref|ZP_18820666.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 9717]
gi|389719211|emb|CCH96923.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 9717]
Length = 185
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 32/179 (17%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGH------LGRSFFVSRLFDLEVR 124
R+ G +P++++ H G T + +VG L ++ + L D+ V
Sbjct: 20 RRQGLIPAVLY-----GHSG--------TESVSLVVGEKAALTLLKKASVNNTLVDVNVP 66
Query: 125 SEFGSGD-LIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGL 183
+G LI++V+ P K +L+ +++F L I VP+ G+ + G
Sbjct: 67 EMPWTGKALIQEVQSHPWKRNLY-------HLSFFSVSAHGKLDIVVPIKAIGEAI--GT 117
Query: 184 RKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEP 242
++GG + V C AD +P I+ D+S + V Q +L GDLK+ + L KD+P
Sbjct: 118 KQGGLIEQFVNEVNVSCIADNIPEVIEFDVSGIGVGQSLLVGDLKMPEGVTL---KDDP 173
>gi|374854422|dbj|BAL57304.1| 50S ribosomal protein L25 [uncultured Bacteroidetes bacterium]
Length = 187
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 22/194 (11%)
Query: 58 PRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSR 117
PR G+ + + R+AG+VP ++ + G L S+ + K+V F
Sbjct: 10 PRGERGSALVRRLRRAGKVPCALYGK------GIHHLFSLPQTEAHKIV-------FTPH 56
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
++ E+ G G E + R+ LH D L++ F PE + + +P+ G
Sbjct: 57 VYLFEI----GLGG--ETYTAILREYQLHPVHDYVLHLDFWVCGPEDEITVALPVKLVG- 109
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
+ G++ GG L + R +K +P +++D+S L + + + AG +++ P ++L
Sbjct: 110 -TAEGVQMGGKLVPMARRLKVRGKVKDLPALLEIDISGLKLGKTLTAGKVQL-PGIQLAV 167
Query: 238 SKDEPVCKIAGGRA 251
S D + ++ RA
Sbjct: 168 SPDTAIARVEVPRA 181
>gi|406025198|ref|YP_006705499.1| 50S ribosomal protein L25 [Cardinium endosymbiont cEper1 of
Encarsia pergandiella]
gi|404432797|emb|CCM10079.1| 50S ribosomal protein L25 [Cardinium endosymbiont cEper1 of
Encarsia pergandiella]
Length = 194
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRS 112
IL RA+ G S K R A +VP +++ GG +++ V +R L+ + +
Sbjct: 6 ILGYKRANLGKAESKKLRAAAQVPGVLY-------GGTEQVHFYVPMVLLRDLI-YTPHA 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
FV DL + R + +++ H ++ L+V FL+ +K+D+P
Sbjct: 58 HFV----DLNIEGSI--------YRCVLQEMQFHPVSEMMLHVDFLQIFDNKKIKMDIPT 105
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F G + G+ KGG L+ +R + + +P +D+D+S LD+ Q + + +
Sbjct: 106 AFVGKAI--GVAKGGVLSKKQRKLPISAYPNNMPSIVDIDVSHLDLGQIVRVHQIPIE-N 162
Query: 233 LKLLRSKDEPVCKIAGGRASDQKKSK 258
+L + PV I RA SK
Sbjct: 163 YTILALPNTPVASIEIPRALRSAASK 188
>gi|168179611|ref|ZP_02614275.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium
botulinum NCTC 2916]
gi|226950546|ref|YP_002805637.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium
botulinum A2 str. Kyoto]
gi|182669554|gb|EDT81530.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium
botulinum NCTC 2916]
gi|226843949|gb|ACO86615.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium
botulinum A2 str. Kyoto]
Length = 178
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 24/186 (12%)
Query: 67 SVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGRSFFVSRLFDLEVR 124
S K R+ G+VP I++ G++ N + ++ N + VG G + D +V
Sbjct: 14 SNKVRRDGKVPGIIY----GKNLNNLMFEVGEIELNSMISQVGEHGVTDINYEGTDYKV- 68
Query: 125 SEFGSGDLIEKVRVLP-RKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGL 183
LI++V+ P +K +H + NVT L+ ++P++F GD++ +
Sbjct: 69 -------LIKEVQKDPVKKNVIHIDLE---NVT----NSSNLINAEIPILFSGDELI--M 112
Query: 184 RKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPV 243
+KGG + K +VK CP + +P I VDLS+ D+ + DL++ + + + D +
Sbjct: 113 KKGGVVQKEKNSVKVRCPEEKLPNNIMVDLSQYDIGKTFRISDLELGEDITFMENLDSTI 172
Query: 244 CKIAGG 249
I G
Sbjct: 173 VSIFFG 178
>gi|410669124|ref|YP_006921495.1| 50S ribosomal protein L25 [Thermacetogenium phaeum DSM 12270]
gi|409106871|gb|AFV12996.1| 50S ribosomal protein L25 [Thermacetogenium phaeum DSM 12270]
Length = 215
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Query: 63 GTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDL 121
GT+ SV+ R G +P++++ +E G L+SV T + +++ + S L +L
Sbjct: 14 GTKGSVRALRNQGMLPAVLYGKEVG-----NVLLSVPTKSLEQVITN---HSIGSTLINL 65
Query: 122 EVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSP 181
+V G + V+ R++ L+ F + ++ ++P+V G+ +P
Sbjct: 66 DVADGEKGGSYL----VMCREIQRDPVRRELLHADFYQVDLTEEIETEIPVVLVGE--AP 119
Query: 182 GLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDE 241
G+++GG L + RTV +P ++ D+S+L++ ++ GDL+ ++++ S++
Sbjct: 120 GVKQGGILQNMLRTVIVSSLPTQIPERLEADISKLEIGDQLTVGDLEPPAGVRIVSSRES 179
Query: 242 PVCKI 246
+ +
Sbjct: 180 VIALV 184
>gi|389775873|ref|ZP_10193719.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
spathiphylli B39]
gi|388436936|gb|EIL93766.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
spathiphylli B39]
Length = 231
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 82/199 (41%), Gaps = 22/199 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R G S + R A VP++V+ G + S+Q L+ F
Sbjct: 7 IKAQSRKDEGKGASRRLRHAAFVPAVVY-------GAGQPPESIQIEHNTILLAAKNEWF 59
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DL V + +VL R H +++ FLR A L+ +VPL
Sbjct: 60 F-SSVLDLNVDGKVQ--------KVLVRDWQKHPFKQLMMHMDFLRIDENAKLRANVPLH 110
Query: 174 FRGDDVSPGLRKGGYLNTIKRT-VKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV--- 229
F + SP + G + + T V+ C +P YI++DL EL I LK+
Sbjct: 111 FLNQEKSPAGKTSGVVISHNLTEVEVSCLPKDLPAYIELDLGELVAGDIIHLSQLKLPAN 170
Query: 230 --HPALKLLRSKDEPVCKI 246
PAL+L + D V +
Sbjct: 171 VELPALQLGEAHDAAVVTV 189
>gi|153876444|ref|ZP_02003761.1| Ribosomal protein L25 [Beggiatoa sp. PS]
gi|152067092|gb|EDN66239.1| Ribosomal protein L25 [Beggiatoa sp. PS]
Length = 212
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
RKAG VP+I++ GG+K IS+ + L+ L F SR+ + + +
Sbjct: 23 RKAGYVPAIIY-------GGDKEPISLTLSH-NDLLRQLEHEAFYSRILTVNIDDQPEQA 74
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
L + +H H L++ F R L +VPL F + S G++ GG L
Sbjct: 75 VL--------KDLHRHPYRPTILHLDFQRVSEAQKLYREVPLHFINESKSVGVKLGGGLV 126
Query: 191 TIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL--LRSKD 240
+ V+ C +P +I+VDL+E+++ + DL + +++ L SKD
Sbjct: 127 SHHLAEVEIRCFPKDLPEFIEVDLTEINLNDTVHLSDLVLSEGVEIVALISKD 179
>gi|372268004|ref|ZP_09504052.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alteromonas
sp. S89]
Length = 210
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R +VP+I++ GG SV Q + L L F S + L V + +
Sbjct: 24 RLEAKVPAIIY-------GGKAEPQSVSLLQ-KDLFKALESESFYSSVITLSVEGKDET- 74
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
V+ R + H L+ F R + + VPL F ++ S G++ GG ++
Sbjct: 75 -------VILRDLQRHPAKAILLHADFQRVSANTKVHVKVPLHFLNEESSKGVKAGGIVS 127
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+ PA +P +I+VDL++L+++ I D+K+
Sbjct: 128 HTLNELDITAPASKLPEFIEVDLADLELDGTIHISDIKL 166
>gi|375013314|ref|YP_004990302.1| 50S ribosomal protein L25 [Owenweeksia hongkongensis DSM 17368]
gi|359349238|gb|AEV33657.1| ribosomal protein L25, Ctc-form [Owenweeksia hongkongensis DSM
17368]
Length = 210
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 137 RVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTV 196
R + R V H +DA +V F + + + I VP+ G+ S G+R GG L R +
Sbjct: 70 RTVIRDVQYHPVSDAIEHVDFFQTSADKAITIQVPINLVGN--SRGVRNGGRLKVNLRKL 127
Query: 197 KFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
K + +P +ID+D++E+ + Q + D+
Sbjct: 128 KVTATEEHLPGHIDIDITEVRIGQSVRVSDVN 159
>gi|291514751|emb|CBK63961.1| ribosomal protein L25, Ctc-form [Alistipes shahii WAL 8301]
Length = 190
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
++ A+ RA G + + R+ G VP ++ G SV +I+ L+ + S
Sbjct: 5 SVKAVKRADFGKKAAKAIRREGMVPCVLC------GNGETETFSVDPREIKPLI-YTPNS 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ V FD+E + E + + R+ H + L++ F R + I +P+
Sbjct: 58 YIVE--FDIEGKKE----------QAVLREAQFHPVREEILHLDFYRIAEGKPVSIAIPV 105
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
G+ + G++ GG L R + + +P I VD++EL V + I GDL+
Sbjct: 106 RLTGN--AEGVKVGGKLALSARKLVVSALVENLPDEIVVDVTELGVGKTIFVGDLEFEN- 162
Query: 233 LKLLRSKDEPVCKIAGGRAS 252
LK + VC + RAS
Sbjct: 163 LKFITPATTAVCAVRVTRAS 182
>gi|170757176|ref|YP_001782751.1| 50S ribosomal protein L25 [Clostridium botulinum B1 str. Okra]
gi|429246436|ref|ZP_19209756.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium
botulinum CFSAN001628]
gi|169122388|gb|ACA46224.1| 50S ribosomal protein L25 [Clostridium botulinum B1 str. Okra]
gi|428756526|gb|EKX79078.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium
botulinum CFSAN001628]
Length = 178
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 24/186 (12%)
Query: 67 SVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGRSFFVSRLFDLEVR 124
S K R+ G+VP I++ G++ N + ++ N + VG G + D +V
Sbjct: 14 SNKVRRDGKVPGIIY----GKNLNNLMFEVGEIELNNMISQVGEHGVTDINYEGTDYKV- 68
Query: 125 SEFGSGDLIEKVRVLP-RKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGL 183
LI++V+ P +K +H + NVT L+ ++P++F GD++ +
Sbjct: 69 -------LIKEVQKDPVKKNVIHIDLE---NVT----NSSNLINAEIPILFSGDELI--M 112
Query: 184 RKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPV 243
+KGG + K +VK CP + +P I +DLS+ D+ + DL++ + + + D +
Sbjct: 113 KKGGVVQKEKNSVKVRCPEEKLPNNIMIDLSQYDIGKTFRISDLELGEDITFMENLDSTI 172
Query: 244 CKIAGG 249
I G
Sbjct: 173 VSIFFG 178
>gi|84500224|ref|ZP_00998490.1| ribosomal protein L25 [Oceanicola batsensis HTCC2597]
gi|84392158|gb|EAQ04426.1| ribosomal protein L25 [Oceanicola batsensis HTCC2597]
Length = 188
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 76 VPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEK 135
VP IV+ GG+ + +Q L+ L F++ L++L+V +
Sbjct: 2 VPGIVY-------GGDNDPLPIQI-PFNDLLKKLKAGRFLATLWNLKVDGH-------DD 46
Query: 136 VRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRT 195
VRV+ R V D P ++ +R + + + +P+ F +D +PG+++GG L ++
Sbjct: 47 VRVICRNVQRDVVKDLPTHLDLMRLRRTSRVNLHIPVEFINEDAAPGIKRGGVLTVVRAD 106
Query: 196 VKFLCPADIVPPYIDVDLSELDVEQKI 222
V+ A +P I VDL+ L++ +
Sbjct: 107 VELNVLAGDIPEKIVVDLTGLEIGDTV 133
>gi|346226487|ref|ZP_08847629.1| 50S ribosomal protein L25/general stress protein Ctc [Anaerophaga
thermohalophila DSM 12881]
Length = 195
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 29/204 (14%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R + G + + R+ G+VP +++ ++ H S + KLV +
Sbjct: 8 ASKRDNLGKTATKQLRREGKVPCVIYGDKETIHA------SALLKEFNKLV-------YT 54
Query: 116 SR--LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
+ L +L V + K V+ + + H +D ++V FL+ + + +++P+
Sbjct: 55 PKVHLVNLNVDGK--------KYNVVIQDIQYHPVSDDAMHVDFLQVFDDKPITMEIPVK 106
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
+G ++ G++ GG L+ KR +K A +P ++VD++ L + + I G L L
Sbjct: 107 LKG--LAAGVKAGGKLSLEKRKLKVKGLAKDMPDMLEVDITNLGLGKGIQVGQLNF-DNL 163
Query: 234 KLLRSKDEPVCKIA---GGRASDQ 254
+LL +K++ V + G RA+ Q
Sbjct: 164 ELLNNKNQVVVSVKLTRGARAAGQ 187
>gi|241764085|ref|ZP_04762123.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax
delafieldii 2AN]
gi|241366616|gb|EER61097.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax
delafieldii 2AN]
Length = 213
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 21/167 (12%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLG 110
+A RA GT S + R +G+ P IV+ GG+ +LI V N + L
Sbjct: 2 NFVAYERAKQGTGASRRLRNSGKTPGIVY-------GGSAEPQLIEVDHNALWHA---LK 51
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
+ F S + D+EV +VL R V H L++ F R + L + V
Sbjct: 52 KEAFHSSVLDMEVAGTTS--------KVLLRDVQYHPYKQLVLHIDFQRVDDKTKLHMKV 103
Query: 171 PLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSEL 216
PL F + S ++ +N + + C +P +I VDLS L
Sbjct: 104 PLHFSNAEESDAVKVDKCMVNPVVNELDVTCMPSDLPEFIAVDLSTL 150
>gi|406982317|gb|EKE03652.1| hypothetical protein ACD_20C00172G0005 [uncultured bacterium]
Length = 200
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF-GS 129
R G++P+ V+ G N +S+Q ++ ++F ++ D V E G
Sbjct: 22 RAEGKLPATVY-------GHNFDSVSLQLDE---------KAFSMAYKGDKTVILELKGD 65
Query: 130 GDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYL 189
GD L + V ++ TD N+ F LK+ VP+ G+ SP ++ GG L
Sbjct: 66 GD---TYNALVKHVQSNAITDEIYNIEFYNVKTGEKLKVSVPVAIVGE--SPAVKAGGIL 120
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSEL-DVEQKILAGDLKVHPA 232
T + ++ C +P I+V +S L ++E I GD+K +PA
Sbjct: 121 RTPQSEIEIECLPKDIPSVIEVSISGLENLEDTITVGDIK-YPA 163
>gi|302877722|ref|YP_003846286.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Gallionella
capsiferriformans ES-2]
gi|302580511|gb|ADL54522.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Gallionella
capsiferriformans ES-2]
Length = 202
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 32/185 (17%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T A R + GT S + RKAG VP +V+ G+ + ++ N S
Sbjct: 4 TFNATTRKTQGTGASRRLRKAGSVPGVVY--------GSGEAVMIEMNHNELYYKLRAES 55
Query: 113 FFVSRL-FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPL-----NVTFLRAPPEALL 166
F S L +L+ + E V L + + P ++ F R +
Sbjct: 56 FHASVLTMNLDGKEE---------------AVQLRAFVNHPFRQQVQHLDFQRVDLSKKI 100
Query: 167 KIDVPLVFRGDDVSPGLRK-GGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILA 224
I VPL F D++P ++ GG ++ + + C PAD+ P +I+VDL + + +
Sbjct: 101 HIKVPLHFINQDIAPAVKTGGGKISHVMIEAEISCLPADL-PAFIEVDLGGMQLGHSVHL 159
Query: 225 GDLKV 229
G+LK+
Sbjct: 160 GELKL 164
>gi|405354022|ref|ZP_11023431.1| LSU ribosomal protein L25p [Chondromyces apiculatus DSM 436]
gi|397092713|gb|EJJ23462.1| LSU ribosomal protein L25p [Myxococcus sp. (contaminant ex DSM
436)]
Length = 220
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A PR G V+ + R G +P++V+ G+H ISV +R+ +
Sbjct: 7 TLEAQPREGSGKGVARRLRAQGLIPAVVY----GKHLEKPVHISVDPKAVRQAIN----- 57
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F+ ++ + GD VL + + T A L+ FL + +K++VPL
Sbjct: 58 --TPHKFNTLIKIKVAGGDR----EVLLKDYQMEPVTRAILHADFLDVRADEQVKVNVPL 111
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
V G + G+ GG L +R ++ +P I+VD++ + + + + D+K+
Sbjct: 112 VLTGR--AQGVADGGLLTQARRELEVWSLPAAIPERIEVDVTPMKITEVLHINDVKL 166
>gi|319787942|ref|YP_004147417.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Pseudoxanthomonas suwonensis 11-1]
gi|317466454|gb|ADV28186.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Pseudoxanthomonas suwonensis 11-1]
Length = 207
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S + R+ G+VP+IV+ GG +S+Q + KL +F S +
Sbjct: 11 REDEGKGASRRLRRDGKVPAIVY-------GGELAPVSIQLDH-EKLWLAQQNEWFYSSI 62
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
DL + +GD+ +VL R + H +++ F R + +L+ VPL F +
Sbjct: 63 LDLSL-----NGDV---QKVLLRDMQRHPYKQQIMHLDFQRVSDDEVLRAAVPLRFVNEA 114
Query: 179 VSPGLRKGGYLNTIKRT-VKFLCPADIVPPYIDVDLSELDV 218
SP + G + + T V C +P I+VDLS+L V
Sbjct: 115 KSPAGKTAGVVIMHELTEVNVACLPKDLPEAIEVDLSDLAV 155
>gi|443651633|ref|ZP_21130654.1| ribosomal protein L25, Ctc-form [Microcystis aeruginosa DIANCHI905]
gi|159027424|emb|CAO89389.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443334492|gb|ELS49003.1| ribosomal protein L25, Ctc-form [Microcystis aeruginosa DIANCHI905]
Length = 185
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P++++ G +G + V L L ++ + L D+ V +G
Sbjct: 20 RRQGLIPAVLY----GHNGTESVSLVVGEKAALTL---LKKASVNNTLVDVNVPEMPWTG 72
Query: 131 D-LIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYL 189
L+++V+ P K +L+ +++F L I VP+ G+ + G ++GG +
Sbjct: 73 KALLQEVQSHPWKRNLY-------HLSFFSVSAHGKLDIVVPIKAIGEAI--GTKQGGLI 123
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEP 242
V C AD +P I+ D+S + V Q +L GDLK+ + L KD+P
Sbjct: 124 EQFVNEVNVSCIADNIPEVIEFDVSGIGVGQSLLVGDLKMPEGVTL---KDDP 173
>gi|110639011|ref|YP_679220.1| 50S ribosomal protein L25 [Cytophaga hutchinsonii ATCC 33406]
gi|122966643|sp|Q11RT6.1|RL25_CYTH3 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|110281692|gb|ABG59878.1| LSU ribosomal protein L25P [Cytophaga hutchinsonii ATCC 33406]
Length = 192
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
++ + + ++V H + L+V FL + +K+++P+ F G SPG+ KGG L
Sbjct: 67 KQYKCVVQEVQFHPINEMLLHVDFLLLDDKKQVKMNIPVKFEG--TSPGVIKGGKLVQKV 124
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRASD 253
T++ +P I D+S+L++ + + GD+K + +L +K PVC + R+
Sbjct: 125 ATLQVKAFPKDLPDVILADISQLELAKSVKVGDIKTN-NYTILNAKSIPVCTVTIPRSLK 183
Query: 254 QKKS 257
Q+++
Sbjct: 184 QEEA 187
>gi|383315921|ref|YP_005376763.1| 50S ribosomal protein L25 [Frateuria aurantia DSM 6220]
gi|379043025|gb|AFC85081.1| ribosomal protein L25, Ctc-form [Frateuria aurantia DSM 6220]
Length = 212
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 17/164 (10%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R G S + R A VP++V+ G + I ++ N I H +
Sbjct: 7 IKAESRKDEGKGASRRLRHAAYVPAVVYGA-----GKAPQSIQIEHNTILLAARH---EW 58
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DL + +EKV L R H L++ F R ALL+ +VPL
Sbjct: 59 FFSSVLDLNIDGN------VEKV--LVRDWQKHPFKQQMLHMDFQRVDQNALLRANVPLH 110
Query: 174 FRGDDVSPGLRKGGYLNTIKRT-VKFLCPADIVPPYIDVDLSEL 216
F D SP + + + T V+ C +P +I+VDL+ L
Sbjct: 111 FLNQDTSPAGKASHVVVSHALTEVEVTCLPKDLPEFIEVDLASL 154
>gi|168181809|ref|ZP_02616473.1| 50S ribosomal protein L25 [Clostridium botulinum Bf]
gi|237796572|ref|YP_002864124.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium
botulinum Ba4 str. 657]
gi|182675191|gb|EDT87152.1| 50S ribosomal protein L25 [Clostridium botulinum Bf]
gi|229262239|gb|ACQ53272.1| 50S ribosomal protein L25 [Clostridium botulinum Ba4 str. 657]
Length = 178
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 24/186 (12%)
Query: 67 SVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGRSFFVSRLFDLEVR 124
S K R+ G+VP I++ G++ N + ++ N + VG G + D +V
Sbjct: 14 SNKVRRDGKVPGIIY----GKNLSNLMFEVGEIELNNMISQVGEHGVTDINYEGTDYKV- 68
Query: 125 SEFGSGDLIEKVRVLP-RKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGL 183
LI++V+ P +K +H + NVT L+ ++P++F GD++ +
Sbjct: 69 -------LIKEVQKDPVKKNVIHIDLE---NVT----NSSNLINAEIPILFSGDELI--M 112
Query: 184 RKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPV 243
+KGG + K +VK CP + +P I +DLS+ D+ + DL++ + + + D +
Sbjct: 113 KKGGVVQKEKNSVKVRCPEEKLPNNIMIDLSQYDIGKTFRISDLELGEDITFMENLDSTI 172
Query: 244 CKIAGG 249
I G
Sbjct: 173 VSIFFG 178
>gi|51893432|ref|YP_076123.1| 50S ribosomal protein L25 [Symbiobacterium thermophilum IAM 14863]
gi|71153113|sp|Q67M16.1|RL252_SYMTH RecName: Full=50S ribosomal protein L25 2; AltName: Full=General
stress protein CTC 2
gi|51857121|dbj|BAD41279.1| 50S ribosomal protein L25 [Symbiobacterium thermophilum IAM 14863]
Length = 194
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A PR + G+R S + R+AG VP I++ G +SV++ Q+ +LV GR
Sbjct: 5 ATPRGT-GSRASRRLRQAGFVPGIIY-----GPGVEPLAVSVRSTQLERLVERQGRGH-- 56
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
L ++V E ++ ++ L R + T +V FL+ + + VP+V
Sbjct: 57 --LIHVQVEGEANPRQVV--IKQLQRDILTQQVT----HVDFLQVDMNRTITLTVPIVVV 108
Query: 176 GDDVSPGLRKGGYLNTIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALK 234
G++ + R+ G L T + V+ C +P + +D+S L + A L P ++
Sbjct: 109 GEEQA---RRRGLLITHELDEVEVECRPTEIPEAVTLDVSGLTEPGPVTAASLSAPPGVR 165
Query: 235 LLRSKDEPV--CKIAGGRASDQKKS 257
+L D V C + GG ++ +
Sbjct: 166 VLEDPDTVVVSCTVIGGGEEEEAST 190
>gi|335424592|ref|ZP_08553600.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Salinisphaera
shabanensis E1L3A]
gi|334888930|gb|EGM27225.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Salinisphaera
shabanensis E1L3A]
Length = 242
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 20/175 (11%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKR--LISVQTNQIRKLVGHLGRSF 113
A R + G + + R+ GRVP+I++ GGN +++++ N + HL
Sbjct: 8 AEKRTAKGRAENRRLRREGRVPAIIY-------GGNGEPVMLTLEHNDLDH---HLDNEA 57
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + + V G G V+ R + H + FLR L++ VPL
Sbjct: 58 FFSHIIKINVA---GGG----SEEVVLRDLQRHPAKPFIEHADFLRIVAGEALRMSVPLH 110
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
F G++ PG+ + G + ++ C +P YI+VD S+L + + +L
Sbjct: 111 FVGEEECPGVADEDGVVQHNMNDIEIECLPRNLPEYIEVDCSKLHLHDSVHLSEL 165
>gi|303256347|ref|ZP_07342363.1| ribosomal protein L25, Ctc-form [Burkholderiales bacterium 1_1_47]
gi|330999042|ref|ZP_08322767.1| ribosomal protein L25, Ctc-form [Parasutterella excrementihominis
YIT 11859]
gi|302861076|gb|EFL84151.1| ribosomal protein L25, Ctc-form [Burkholderiales bacterium 1_1_47]
gi|329575784|gb|EGG57310.1| ribosomal protein L25, Ctc-form [Parasutterella excrementihominis
YIT 11859]
Length = 217
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 21/175 (12%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A+ R + GT S + R+A ++P IV+ GG ++ + ++ L + F
Sbjct: 5 AVTRKAQGTGASRRLRRAEKLPGIVY-------GGKVAATPIELDH-NEIFHALRKEKFH 56
Query: 116 SRLFD--LEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
+ + + L+ +SE RVL R +H L++ F R + ++++VPL
Sbjct: 57 ASILEMVLDGKSE----------RVLLRSFQMHPYKPQVLHIDFQRISADEQIRMNVPLH 106
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
F G++ SP + +N + C D +P +I VDLS L V++ + DL
Sbjct: 107 FVGEEKSPAITIDKTNVNHALTELLVSCLPDQLPEFITVDLSGLTVDKPVHVSDL 161
>gi|288554661|ref|YP_003426596.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
pseudofirmus OF4]
gi|288545821|gb|ADC49704.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
pseudofirmus OF4]
Length = 211
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 25/192 (13%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK---RLISVQTNQIRKLVGHL 109
T+ A PR + + RK G VP+I++ GNK + + V++ + K V +
Sbjct: 4 TLQANPRTDLTGSATRQIRKDGHVPAILY--------GNKIESKPVYVESVEFLKTVREV 55
Query: 110 GRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
G++ LF L V GS K +V+ V + + ++V F ++ + D
Sbjct: 56 GKN----GLFSLNVD---GS-----KHQVMIHDVQIDPLKNEYVHVDFFEVDMKSEIDAD 103
Query: 170 VPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
VP+ G+ +PG ++GG L+ + + C + +P I VD+S L++ I DL+
Sbjct: 104 VPVRLTGE--APGTKEGGVLSHLLYDISVKCLPNDIPEEIKVDVSGLNIGDSIQITDLRD 161
Query: 230 HPALKLLRSKDE 241
++ + +E
Sbjct: 162 KVSVDITNEDEE 173
>gi|260893657|ref|YP_003239754.1| 50S ribosomal protein L25/general stress protein Ctc [Ammonifex
degensii KC4]
gi|260865798|gb|ACX52904.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ammonifex
degensii KC4]
Length = 197
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 18/165 (10%)
Query: 74 GRVPSIVFEQEDGQHGGNKRLISVQTN-QIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDL 132
G++P++V+ K L SV +R L LG +L DL++ GD
Sbjct: 25 GKIPAVVY---------GKALGSVPVEVSLRDLKKVLGGETIKGKLIDLKI-----VGDG 70
Query: 133 IEKV-RVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNT 191
E+ + L +++ + T ++V F + + VP+ G+ V G++KGG L
Sbjct: 71 WERQEKALVKEMQHNPLTGELIHVDFHQVSLTEEVTATVPVELSGEPV--GVKKGGVLEH 128
Query: 192 IKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
R V+ C +P I VD+S LDV I DL V P +K+L
Sbjct: 129 FLREVEISCLPTALPEVIKVDVSSLDVGDTIFVRDLPVPPGVKVL 173
>gi|220933713|ref|YP_002512612.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254801065|sp|B8GLA7.1|RL25_THISH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|219995023|gb|ACL71625.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 212
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 81/164 (49%), Gaps = 17/164 (10%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A PRA G S + R+AG+VP+I++ + G + + I++ N + + +L F
Sbjct: 9 AEPRADQGKGASRRLRRAGKVPAILYGE-----GKDPQPITLDHNAV---MLNLEHEAFY 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S + +++ G EK + R V H L++ LR + +++ VPL F
Sbjct: 61 SHILSVKL------GGKAEK--AILRDVQRHPCKPIILHLDLLRVSEDHAIRVHVPLHFT 112
Query: 176 GDDVSPGLRKGGYLNTIKRT-VKFLCPADIVPPYIDVDLSELDV 218
++ G++ GG + + + V+ C +P +I+VD++ L+V
Sbjct: 113 NEESCVGVKTGGGMVSHQMVEVEVECLPKHLPEFIEVDVASLNV 156
>gi|334338783|ref|YP_004543763.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfotomaculum ruminis DSM 2154]
gi|334090137|gb|AEG58477.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfotomaculum ruminis DSM 2154]
Length = 212
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 94/192 (48%), Gaps = 21/192 (10%)
Query: 64 TRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHL-GRSFFVSRLFDL 121
+R S++E R+AG +P++V+ G+H + ISV +++K++ GR+ +S +
Sbjct: 15 SRSSLREIREAGEIPAVVY----GKHV-DSLSISVDGKELKKILNSTTGRNTLISMKVNG 69
Query: 122 EVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSP 181
++ +++ ++V P + + +V F + ++ ++ VP+ G S
Sbjct: 70 GKQTV-----MVKNLQVDPLRHDIQ-------HVDFQQISEDSKIRTVVPIQLVG--TSK 115
Query: 182 GLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDE 241
G+ GG + R+ + C +P I VD+S+L++ + DL V +K+L
Sbjct: 116 GVALGGVIQQELRSAEVECLPSQIPDAIKVDISDLEIGDALTVCDLNVASEIKILDHPRS 175
Query: 242 PVCKIAGGRASD 253
V +A RAS+
Sbjct: 176 TVVSVAAARASE 187
>gi|149369577|ref|ZP_01889429.1| 50S ribosomal protein L25/general stress protein Ctc [unidentified
eubacterium SCB49]
gi|149357004|gb|EDM45559.1| 50S ribosomal protein L25/general stress protein Ctc [unidentified
eubacterium SCB49]
Length = 204
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 24/201 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI R S G + + R AG+VP +V+ E H L
Sbjct: 5 TINGSQRESVGKKATKALRDAGKVPCVVYGGEAPIHFSADELA----------------- 47
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F ++ +V + D +KV + + + H TD L++ F + + + +++P+
Sbjct: 48 -FSKLVYTPDVHTVVIELDG-KKVDAILQDIQFHPVTDRILHIDFYQISDDKEVMLEIPV 105
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKF-LCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
G+ S G+R GG L + R ++ PA++ P I+VD++E+ + K+ +
Sbjct: 106 RITGN--SRGVRNGGTLRIVSRKLRVKAIPANL-PDVIEVDITEMKIGDKLYVT-AAAND 161
Query: 232 ALKLLRSKDEPVCKIAGGRAS 252
+L S +E +C++ R +
Sbjct: 162 KFTILHSDNEVICQVRTSRTA 182
>gi|386828642|ref|ZP_10115749.1| ribosomal protein L25, Ctc-form [Beggiatoa alba B18LD]
gi|386429526|gb|EIJ43354.1| ribosomal protein L25, Ctc-form [Beggiatoa alba B18LD]
Length = 207
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 16/175 (9%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
++A RA G S + R+ +VP++++ G + IS+ +Q +++ HL
Sbjct: 9 VIAQSRADIGKGASRRLRRDNKVPAVLY-------GATQEPISLTLSQ-KEISKHLEHES 60
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + +++ G+ EK + + V H ++V F R + + VPL
Sbjct: 61 FYSHVLTIQI-----DGNKTEKA--VLKAVQRHPYRPIVMHVDFQRINESEKIHMHVPLH 113
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
F ++ ++ +GG ++ V+ C +P YI +DL ++++ Q I DL
Sbjct: 114 FINEESCAAVKTQGGVISHHLSEVEIYCLPKDLPEYIAIDLEKVELGQTIHLSDL 168
>gi|425435482|ref|ZP_18815933.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 9432]
gi|425450867|ref|ZP_18830690.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 7941]
gi|440754595|ref|ZP_20933797.1| ribosomal protein L25, Ctc-form [Microcystis aeruginosa TAIHU98]
gi|389680006|emb|CCH91294.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 9432]
gi|389768110|emb|CCI06688.1| 50S ribosomal protein L25 [Microcystis aeruginosa PCC 7941]
gi|440174801|gb|ELP54170.1| ribosomal protein L25, Ctc-form [Microcystis aeruginosa TAIHU98]
Length = 185
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P++++ G +G + V L L ++ + L D+ V +G
Sbjct: 20 RRQGLIPAVLY----GHNGTESVSLVVGEKAALTL---LKKASVNNTLVDVNVPEMPWTG 72
Query: 131 D-LIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYL 189
LI++V+ P K +L+ +++F L I VP+ G+ + G ++GG +
Sbjct: 73 KALIQEVQSHPWKRNLY-------HLSFFSVSAHGKLDIVVPIKAIGEAI--GTKQGGLI 123
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEP 242
V C AD +P I+ D+S + V Q +L GDLK+ + L KD+P
Sbjct: 124 EQFVNEVNVSCIADNIPEVIEFDVSGIGVGQFLLVGDLKMPEGVTL---KDDP 173
>gi|168704119|ref|ZP_02736396.1| 50S ribosomal protein L25/general stress protein Ctc [Gemmata
obscuriglobus UQM 2246]
Length = 216
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 25/196 (12%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ RA G+R + + RK G VP+IV+ G + +S+ N L ++
Sbjct: 6 TLKTTARAETGSRAAARLRKQGLVPAIVY-------GHKQANVSLAVN-----AKELDQA 53
Query: 113 FFV--SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
V +R+ DL++ + + VL R++ ++V F R L+++ V
Sbjct: 54 IRVQHARVLDLDIEGKTET--------VLIRELQWDYLGKEMIHVDFERKDRAELVRVSV 105
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVH 230
P+ + +P GG L+ + CP +P I +D++ L + I DL +
Sbjct: 106 PVALKN---APKATGGGVLDQPFHALHVECPLGAIPESIAIDITNLTLGHPIHIRDLALP 162
Query: 231 PALKLLRSKDEPVCKI 246
P +K+L + + V ++
Sbjct: 163 PGVKVLDAPEGVVVQL 178
>gi|194336703|ref|YP_002018497.1| 50S ribosomal protein L25/general stress protein Ctc [Pelodictyon
phaeoclathratiforme BU-1]
gi|226736345|sp|B4SAJ4.1|RL25_PELPB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|194309180|gb|ACF43880.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pelodictyon
phaeoclathratiforme BU-1]
Length = 199
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
Query: 69 KERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSRLF-DLEVRSE 126
K RK G VP +++ H G + + ISV +RKLV H S + F D +++
Sbjct: 20 KLRKNGIVPGVIY------HKGEETIAISVNELALRKLV-HSAESHIIDLQFPDGKIKRS 72
Query: 127 FGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKG 186
F + V H TD ++ F E +++++VP+ G+ S G+ KG
Sbjct: 73 F------------IKDVQFHPVTDRIIHTDFQLFSAEEIIELEVPVAVSGE--SAGVEKG 118
Query: 187 GYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGD--LKVHPALKLLRSKDEPVC 244
G L I + + +P ++ VD++ L++ I + L + L+++ D PV
Sbjct: 119 GKLLIILHALTIKGKPEDMPDHLVVDVTALEIGHSIHVKEIPLDAYTGLQIMDDPDTPVI 178
Query: 245 KIAGGR 250
+ +
Sbjct: 179 TVLASK 184
>gi|225166107|ref|ZP_03727838.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Diplosphaera
colitermitum TAV2]
gi|224799649|gb|EEG18147.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Diplosphaera
colitermitum TAV2]
Length = 250
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 19/198 (9%)
Query: 58 PRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHL-GRSFFVS 116
PRA G S + RKA ++P+I++ G+H + L +V + KL+ + GRS +
Sbjct: 12 PRAQTGRSASRRVRKANQIPAILY----GKHTKPETL-AVDAPEFAKLLKAVAGRSLII- 65
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
E+ + + D K ++V TD L+V + + I+VP+ G
Sbjct: 66 -----ELHRKDKATD--NKALSFLQEVQRDPITDRFLHVDLQEVKADEKMDINVPVSLVG 118
Query: 177 DDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
+ S G++ + G L+ T++ C +PP+I+VD++EL + I G +K ++L
Sbjct: 119 E--SFGVKNQNGVLDINAHTLRIRCLPKDLPPHIEVDVTELKAGESIKVGSIKAPAGVEL 176
Query: 236 LRSKDEPV--CKIAGGRA 251
P+ C+I A
Sbjct: 177 RDLPGHPIVSCQIVEEEA 194
>gi|325298380|ref|YP_004258297.1| 50S ribosomal protein L25 [Bacteroides salanitronis DSM 18170]
gi|324317933|gb|ADY35824.1| 50S ribosomal protein L25 [Bacteroides salanitronis DSM 18170]
Length = 198
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 17/189 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSR 117
R G + + RK +VP I++ + ++G +V +R LV + + V+
Sbjct: 11 RTETGKKATHDLRKNNQVPCILYGMKKDENGNPAATPFAVTVEGLRNLV-YTPHIYVVNL 69
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
D +V V + + + H TDA L+V F + E + ++VP+ G
Sbjct: 70 NIDGQV------------VNAIMKDIQFHPVTDAILHVDFYQINEENPIVMEVPVQLEG- 116
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
++ G++ GG L R +K + +P + ++++ L + + I G+L L+LL
Sbjct: 117 -LAEGVKAGGKLALQVRKLKVKALYNNIPERLVINVTNLGLGKTIKVGELHF-DNLELLN 174
Query: 238 SKDEPVCKI 246
+KD VC +
Sbjct: 175 AKDTVVCAV 183
>gi|297207396|ref|ZP_06923835.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|296887959|gb|EFH26853.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus ATCC
51811]
Length = 219
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 56 AIPRASPGTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIR--KLVGHLGRS 112
+I R TR +K+ RK+G+VP++V+ G + +SV+ +++ K++ +GR+
Sbjct: 8 SIIRQGKQTRSDLKQLRKSGKVPAVVY-------GYGTKNVSVKVDEVEFIKVIREVGRN 60
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ E G G + ++V+ + ++ FL ++VP+
Sbjct: 61 GVI----------ELGVGS--KTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPV 108
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
G+ V G ++GG + ++ D +P I+VD++EL++ + D+KV
Sbjct: 109 QLVGEAV--GAKEGGVVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGD 166
Query: 233 LKLLRSKDEPVCKIAG 248
K+ E V +
Sbjct: 167 FKIENDSSESVVTVVA 182
>gi|226946187|ref|YP_002801260.1| 50S ribosomal protein L25/general stress protein Ctc [Azotobacter
vinelandii DJ]
gi|259646681|sp|C1DEV6.1|RL25_AZOVD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226721114|gb|ACO80285.1| ribosomal protein L25 [Azotobacter vinelandii DJ]
Length = 198
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFG 128
R A +VP++++ GG+K + IS+ I KL+ + F S + L + G
Sbjct: 24 RNAAQVPAVIY-------GGDKEPQSISILAKDITKLIE--DEAAF-SHVITLNIA---G 70
Query: 129 SGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK-GG 187
+ + VL + + H A ++ FLR + L VPL F + S G+++ GG
Sbjct: 71 ATE-----TVLIKALQRHPSKAAVMHADFLRVVADHKLSAVVPLHFVNAETSVGVKQQGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL---RSKDEPVC 244
++ + V+ C +P +I+VDL++++V Q + +L V ++L+ D V
Sbjct: 126 EVSHVISEVEVSCLPKDLPEFIEVDLAQVEVGQIVHLSNLSVPAGVELVALAHGNDLAVA 185
Query: 245 KIAGGRASDQ 254
I R ++
Sbjct: 186 NIHASRVKEE 195
>gi|39995768|ref|NP_951719.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter
sulfurreducens PCA]
gi|409911212|ref|YP_006889677.1| 50S ribosomal protein L25 [Geobacter sulfurreducens KN400]
gi|71153144|sp|Q74FE7.1|RL25_GEOSL RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|39982532|gb|AAR33992.1| ribosomal protein L25 [Geobacter sulfurreducens PCA]
gi|298504778|gb|ADI83501.1| ribosomal protein L25 [Geobacter sulfurreducens KN400]
Length = 194
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 153 LNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVD 212
L+V F R + +K+ VPLV G + G+++GG L+ + ++ C +P I+VD
Sbjct: 91 LHVDFHRISLDEKVKVHVPLVMVG--TAAGVKEGGMLDVVTYSLDVECLPTAIPEAINVD 148
Query: 213 LSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAG 248
++ L + I +L + +K+L + P+ I G
Sbjct: 149 VTNLAIGHSIHVSELVLPAGIKVLNDPETPIVSIHG 184
>gi|395217681|ref|ZP_10401723.1| 50S ribosomal protein L25/general stress protein Ctc [Pontibacter
sp. BAB1700]
gi|394454890|gb|EJF09471.1| 50S ribosomal protein L25/general stress protein Ctc [Pontibacter
sp. BAB1700]
Length = 195
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 9/99 (9%)
Query: 137 RVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTV 196
R + + V H + L+V FL+ + +KIDVP+ F G+ SPG+ GG L T R +
Sbjct: 70 RAILQDVQFHPVNEMLLHVDFLQLQEDKEVKIDVPVKFVGN--SPGVMVGGKLVTKLRKL 127
Query: 197 KF-LCPADIVPPYIDVDLSELDVEQ-----KILAGDLKV 229
K PA++ P YI+V++S+L++ + KI GD ++
Sbjct: 128 KIKALPANL-PDYIEVNISDLELGKSIKVSKIAKGDYEI 165
>gi|162455217|ref|YP_001617584.1| 50S ribosomal protein L25/general stress protein Ctc [Sorangium
cellulosum So ce56]
gi|189042374|sp|A9GXJ8.1|RL25_SORC5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|161165799|emb|CAN97104.1| 50S ribosomal protein L25 [Sorangium cellulosum So ce56]
Length = 229
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 88/193 (45%), Gaps = 21/193 (10%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQI--RKLVGHLGRSF 113
A R G S + R+AG++P+I + +E ++ Q+ I + L+ LG
Sbjct: 8 ATRREDSGKSASSRLRRAGQIPAIAYGRE----------LAPQSVAISPKALLQVLGSDH 57
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
+ + +L + + + + V+ R H + ++ F++ + + + +P
Sbjct: 58 GKNSVVELAIENG-------QTLTVMVRDYDYHPISRELVHADFIQVKLDQPVDVQIP-- 108
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
FR G+ GG L I RT+ C + +P +I++D++ELD+ A LK+ +
Sbjct: 109 FRCVGKPKGVVTGGVLQQIFRTIPVRCLPEKIPSFIEIDVTELDLGDSYKASGLKLPEGV 168
Query: 234 KLLRSKDEPVCKI 246
K L + D+ + +
Sbjct: 169 KTLLADDQTIAVV 181
>gi|429463183|ref|YP_007184646.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|429338697|gb|AFZ83120.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
Length = 141
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 137 RVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG-YLNTIKRT 195
+V+ R V H L+V F R + VPL F + SP ++ GG +N +
Sbjct: 11 QVILRSVQWHPYKQQVLHVDFQRVSANQNINTKVPLHFLNAETSPAVKLGGAIINHVITE 70
Query: 196 VKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA----GGRA 251
++ C ++PP+I++DLS +++ I D+ + + S +P+ A G
Sbjct: 71 LEISCLPAVLPPFIEIDLSNIELGNSIHFSDIILPAGVSYNGSDPDPLLATAFVNEGVDD 130
Query: 252 SDQK 255
DQK
Sbjct: 131 EDQK 134
>gi|449128421|ref|ZP_21764667.1| 50S ribosomal protein L25 [Treponema denticola SP33]
gi|448940829|gb|EMB21733.1| 50S ribosomal protein L25 [Treponema denticola SP33]
Length = 210
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R++ G +VK RKAGR+P++++++ G I V + KL + S V
Sbjct: 8 ANERSTYGKNAAVKMRKAGRIPAVMYDRH-----GKSVPIDVDEREFMKLFKLVTESTIV 62
Query: 116 SRLF---DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ D EV + D++ D ++ F L+ V +
Sbjct: 63 TLNAAGKDYEVFIKDFQHDIVR---------------DKIKHIDFYEVERGKTLRTKVKI 107
Query: 173 VFRGDDVSP-GLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
G SP G+R GG L T ++ C +P I VD+S LDV Q + D+K+
Sbjct: 108 KLEG---SPEGVRHGGILETGITELELECLPKDLPARIVVDVSALDVNQSLHVRDIKLPE 164
Query: 232 ALKLLRSKDEPVCKI 246
A+ +L S D V I
Sbjct: 165 AVTVLTSDDITVAAI 179
>gi|157363317|ref|YP_001470084.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga
lettingae TMO]
gi|157313921|gb|ABV33020.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga
lettingae TMO]
Length = 216
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 27/198 (13%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTN--QIRKLVGHLGRSF 113
A+ R G R K R G +P++V+ G +S+ N ++ KL+ +
Sbjct: 5 AMLRNERGKRSVRKMRAKGLIPAVVY-------GPETEPLSINLNKSEVEKLLAKASEAL 57
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
V LE++ + D E++ V +KV + TD +++ F + +KI+VP+
Sbjct: 58 PVG----LEIKYD----DRSEEMEVFIKKVQVDKVTDEIVHIDFYKPAKGHTMKINVPIR 109
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPP----YIDVDLSELDVEQKILAGDLKV 229
G + G+ KGG L + P + +P +I++D++ L++ Q + DL++
Sbjct: 110 VFGKAI--GVEKGGILEIVHNE----LPVETLPSALIDHIEIDVTHLELGQSVHVKDLRL 163
Query: 230 HPALKLLRSKDEPVCKIA 247
+K L +E + I
Sbjct: 164 PSGMKALLHPEEALVTIV 181
>gi|37519968|ref|NP_923345.1| 50S ribosomal protein L25 [Gloeobacter violaceus PCC 7421]
gi|68053196|sp|Q7NNL2.1|RL25_GLOVI RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|35210960|dbj|BAC88340.1| 50S ribosomal protein L25 [Gloeobacter violaceus PCC 7421]
Length = 211
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 15/176 (8%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ GR+P++++ G G + ++ L L R + + L+V + SG
Sbjct: 20 RREGRIPAVLY----GHRGTQSLALELEQRTAEDL---LKRVTINNTILPLKVERGW-SG 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
D VL R+V + L+++F + +D+PLVF G+ V + GG L
Sbjct: 72 D------VLLREVQHDAVGGKLLHLSFFAVAGHGSITLDLPLVFTGEAVGVKM-DGGLLE 124
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
+ + P VP I+VD+S + V + DL + P ++++ + D V +
Sbjct: 125 KVLTQLTVNTPPTDVPEAIEVDISTMQVGDMLYVKDLVLPPGIEVVNTPDLVVAHL 180
>gi|381182422|ref|ZP_09891230.1| 50S ribosomal protein L25/general stress protein Ctc [Listeriaceae
bacterium TTU M1-001]
gi|380317696|gb|EIA21007.1| 50S ribosomal protein L25/general stress protein Ctc [Listeriaceae
bacterium TTU M1-001]
Length = 208
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 19/184 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R AGR+P I++ G N +SV + ++ K + GR+ S D GS
Sbjct: 22 RNAGRIPGIIY----GYQSENIT-VSVDSLELIKAIREHGRNAVFSVTVD-------GS- 68
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
K+ VL + + D ++V FL ++ DV + GD S G+++GG L
Sbjct: 69 ----KLNVLLHEYQVDPLKDELIHVDFLAVNMSEEVEADVRIDLVGD--SSGVKEGGVLQ 122
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGR 250
+ V D +P I+VD+++L + + GD+ ++ +E V ++ R
Sbjct: 123 QVLYEVTVAATPDKLPEAIEVDIAKLAIGDALTIGDIPKDKNYEIKTEAEEVVVTVSAPR 182
Query: 251 ASDQ 254
++
Sbjct: 183 TEEE 186
>gi|422341832|ref|ZP_16422772.1| 50S ribosomal protein L25 [Treponema denticola F0402]
gi|449102800|ref|ZP_21739547.1| 50S ribosomal protein L25 [Treponema denticola AL-2]
gi|449107201|ref|ZP_21743858.1| 50S ribosomal protein L25 [Treponema denticola ASLM]
gi|451968897|ref|ZP_21922126.1| 50S ribosomal protein L25 [Treponema denticola US-Trep]
gi|325473900|gb|EGC77088.1| 50S ribosomal protein L25 [Treponema denticola F0402]
gi|448963002|gb|EMB43687.1| 50S ribosomal protein L25 [Treponema denticola ASLM]
gi|448965602|gb|EMB46263.1| 50S ribosomal protein L25 [Treponema denticola AL-2]
gi|451702350|gb|EMD56772.1| 50S ribosomal protein L25 [Treponema denticola US-Trep]
Length = 211
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 84/195 (43%), Gaps = 27/195 (13%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R++ G +VK R+AGR+P++++++ G I V + KL + S V
Sbjct: 8 ANERSTYGKNAAVKMRRAGRIPAVMYDRH-----GKSVPIDVDEREFMKLFKLVTESTIV 62
Query: 116 SRLF---DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ D EV + D++ +D ++ F L+ V +
Sbjct: 63 TLNAAGKDYEVFIKDFQHDIV---------------SDKIKHIDFYEVERGKTLRTKVKI 107
Query: 173 VFRGDDVSP-GLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
G SP G+R GG L T ++ C +P I VD+S LDV Q + D+K+
Sbjct: 108 RLEG---SPEGVRHGGILETGITELELECLPKDLPARIIVDVSALDVNQSLHVRDIKLPE 164
Query: 232 ALKLLRSKDEPVCKI 246
A+ +L S D V I
Sbjct: 165 AVTVLTSDDITVAAI 179
>gi|160902897|ref|YP_001568478.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Petrotoga
mobilis SJ95]
gi|160360541|gb|ABX32155.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Petrotoga
mobilis SJ95]
Length = 219
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
+ L +L V+ E D EK + V H +D P++V F + + +PL F
Sbjct: 59 TTLIELNVKGE----DSEEKFTCFVKSVQRHKVSDQPIHVDFYVPEEGRKMNLRIPLEFE 114
Query: 176 GDDVSPGLRKGGYLNTIKRTVKF-LCPADIVPPYIDVDLSELDVEQKILAGDLK 228
G+ + G+ +GGYLNT + + P+DIV I VD+S L + + + D+K
Sbjct: 115 GEPI--GVTQGGYLNTYVHEIPVAILPSDIVDS-IKVDISALKLGESLSVSDIK 165
>gi|386728257|ref|YP_006194640.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
71193]
gi|418980450|ref|ZP_13528231.1| LSU ribosomal protein L25P [Staphylococcus aureus subsp. aureus
DR10]
gi|379991775|gb|EIA13239.1| LSU ribosomal protein L25P [Staphylococcus aureus subsp. aureus
DR10]
gi|384229550|gb|AFH68797.1| LSU ribosomal protein L25P [Staphylococcus aureus subsp. aureus
71193]
Length = 221
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 56 AIPRASPGTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIR--KLVGHLGRS 112
+I R TR +K+ RK+G+VP++V+ G + +SV+ +++ K++ +GR+
Sbjct: 10 SIIRQGKQTRSDLKQLRKSGKVPAVVY-------GYGTKNVSVKVDEVEFIKVIREVGRN 62
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ E G G + ++V+ + ++ FL ++VP+
Sbjct: 63 GVI----------ELGVGS--KTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPV 110
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
G+ V G ++GG + ++ D +P I+VD++EL++ + D+KV
Sbjct: 111 QLVGEAV--GAKEGGVVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGD 168
Query: 233 LKLLRSKDEPVCKIAG 248
K+ E V +
Sbjct: 169 FKIENDSAESVVTVVA 184
>gi|406887537|gb|EKD34292.1| hypothetical protein ACD_75C02403G0002, partial [uncultured
bacterium]
Length = 200
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 16/182 (8%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
RK G P++ + G +SV + K++ + F+ L + E
Sbjct: 23 RKKGLTPAVFY-----GRGEEAIPLSVNVTDLTKIIKTRKENIFIKLLIEGE-------- 69
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
+ +EK+ ++ +++ + + + F + L ID+PL F G + G+ GG L
Sbjct: 70 NSLEKLTMI-KELQIEPVSRRFYHADFYEIRMDHKLTIDIPLRFVGTPI--GVENGGELQ 126
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGR 250
+KR +K C +P +IDVD+S L++ I DL++ +++L D V ++ +
Sbjct: 127 HLKRDIKVSCLPAAMPDFIDVDVSGLEIGASIKIQDLQIPEGVEVLDPGDVGVAIVSFVK 186
Query: 251 AS 252
S
Sbjct: 187 VS 188
>gi|408370955|ref|ZP_11168727.1| 50S ribosomal protein L25/general stress protein Ctc [Galbibacter
sp. ck-I2-15]
gi|407743512|gb|EKF55087.1| 50S ribosomal protein L25/general stress protein Ctc [Galbibacter
sp. ck-I2-15]
Length = 203
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 29/198 (14%)
Query: 53 TILAIPRASPGTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLG 110
TI R S G +VS K R AG+VP +++ GG+K L S + + LV
Sbjct: 5 TIKGSQRESVG-KVSTKALRNAGKVPCVIY-------GGDKALHFSAEEKAFKDLV---- 52
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
+ + + E G+ + + + H TD L++ F + + + I++
Sbjct: 53 ---YTPNAHTVVISLEDGAS-----YNAILQDIQFHPVTDTILHIDFYQLEDDREVTIEI 104
Query: 171 PLVFRGDDVSPGLRKGGYL--NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
P+ R V+PG+ GG L N+ K VK L PA++ P YI+ D+S L++ K+ +
Sbjct: 105 PV--RTVGVAPGVLAGGVLRLNSRKLKVKAL-PANL-PDYIEADISGLEIGNKLYVTKV- 159
Query: 229 VHPALKLLRSKDEPVCKI 246
+ K++ + VC++
Sbjct: 160 ANENYKIMHPDNTVVCQV 177
>gi|389737032|ref|ZP_10190525.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
sp. 115]
gi|388437814|gb|EIL94578.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
sp. 115]
Length = 218
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 24/198 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I A R G S + R AG VP++V+ E I ++ N I H +
Sbjct: 7 IKAQSRKDEGKGASRRLRHAGFVPAVVYGAEQAPQN-----IQIEHNTILLAAKH---EW 58
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F S + DL V + +VL R H +++ FLR + L++ VPL
Sbjct: 59 FFSSILDLNVDGKVQ--------KVLVRDWQKHPFKQLMMHMDFLRINEKEALRVSVPLH 110
Query: 174 FRGDDVSPGLRKGGYLNTIKRT-VKFLCPADIVPPYIDVDLSEL------DVEQKILAGD 226
F + S + G + + T ++ C +P +I++DL++L + Q L
Sbjct: 111 FLNQEASAAGKTSGVVISHNLTELEISCLPKNLPEFIELDLADLKPGDIIHMSQIKLPAG 170
Query: 227 LKVHPALKLLRSKDEPVC 244
+++ PAL L S D V
Sbjct: 171 VEI-PALHLGASHDSAVV 187
>gi|426404602|ref|YP_007023573.1| 50S ribosomal protein L25 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425861270|gb|AFY02306.1| 50S ribosomal protein L25 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 213
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
+ + LF+L+ + +G + VL + V +H + P +V F + ++++V +
Sbjct: 56 YENALFNLKSSDKNANG-----IVVLIKSVDVHPLSRRPQHVDFFALDLKKAVRVNVEVR 110
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
G + GL +GG LN + R+V+ C +P + D+S L V + D+K ++
Sbjct: 111 LEGKAI--GLSEGGLLNVVLRSVEVECLPTEIPEFFTADISNLAVGDALHVSDIKTAGSV 168
Query: 234 KLLRSKDEPVCKI 246
K++ ++ V +
Sbjct: 169 KMITGAEQTVAVV 181
>gi|193215984|ref|YP_001997183.1| 50S ribosomal protein L25/general stress protein Ctc
[Chloroherpeton thalassium ATCC 35110]
gi|226736298|sp|B3QWH6.1|RL25_CHLT3 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|193089461|gb|ACF14736.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Chloroherpeton thalassium ATCC 35110]
Length = 199
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 87/177 (49%), Gaps = 24/177 (13%)
Query: 54 ILAIPRASPGTRVSVKERKA-GRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGR 111
+L R PG + +K+ +A G VP+ ++ H G + +SV+ +RK++ +
Sbjct: 5 VLEAERRMPGKKSDLKQLRANGNVPATLY------HKGEPSISLSVKEQSLRKVI-YTTE 57
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
S ++ F D EK V+ + + TD+ + F + ++++VP
Sbjct: 58 SHIINLRFT----------DGTEKPSVM-KDYQFNPLTDSITHADFQLLKSDEYVEVEVP 106
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
++F G+ V G+ KGG + ++ C P+D+ P +I VD+S +D+ + + G+L
Sbjct: 107 ILFTGNPV--GVVKGGMVQATLHKLEIRCLPSDM-PEHITVDISSMDMGESLHVGEL 160
>gi|415684056|ref|ZP_11449211.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus CGS00]
gi|315193864|gb|EFU24258.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus CGS00]
Length = 213
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 56 AIPRASPGTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIR--KLVGHLGRS 112
+I R TR +K+ RK+G+VP++V+ G + +SV+ +++ K++ +GR+
Sbjct: 6 SIIRQGKQTRSDLKQLRKSGKVPAVVY-------GYGTKNVSVKVDEVEFIKVIREVGRN 58
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ E G G + ++V+ + ++ FL ++VP+
Sbjct: 59 GVI----------ELGVGS--KTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPV 106
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
G+ V G ++GG + ++ D +P I+VD++EL++ + D+KV
Sbjct: 107 QLVGEAV--GAKEGGVVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGD 164
Query: 233 LKLLRSKDEPVCKIAG 248
K+ E V +
Sbjct: 165 FKIENDSAESVVTVVA 180
>gi|167579760|ref|ZP_02372634.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
thailandensis TXDOH]
gi|167617836|ref|ZP_02386467.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
thailandensis Bt4]
Length = 167
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
L + F S + DLEV + RVL R V H L+V F R P+ L
Sbjct: 13 LKKEAFHSSILDLEVAGK--------SQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHT 64
Query: 169 DVPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGD 226
VPL F + SP ++ ++ + ++ C PAD+ P +++VDLS+++ Q + A D
Sbjct: 65 KVPLHFLNAESSPAVKLSSAVVSHVVTEIEVECLPADL-PEFLEVDLSKIEAGQSLHAKD 123
Query: 227 L 227
+
Sbjct: 124 I 124
>gi|390953781|ref|YP_006417539.1| 50S ribosomal protein L25 [Aequorivita sublithincola DSM 14238]
gi|390419767|gb|AFL80524.1| LSU ribosomal protein L25P [Aequorivita sublithincola DSM 14238]
Length = 216
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 90/201 (44%), Gaps = 28/201 (13%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI R S G + + R AG VP +V+ G K IS +I
Sbjct: 5 TIKGSQRESVGKKATKALRNAGMVPCVVY--------GGKEPISFSAEEIA--------- 47
Query: 113 FFVSRLFDLEVRS---EFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
F + ++ +V + + G KV+ + + + H TD L++ F + + + ++
Sbjct: 48 -FKNLVYTPDVHTVVVDLGGS----KVQAILQDIQFHPVTDRILHIDFYQIFDDKEVMME 102
Query: 170 VPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+P+ G+ + G+R GG L + R ++ + +P +I+ D++E+ + K+ ++
Sbjct: 103 IPVRTTGN--ARGVRNGGTLRIVTRKLRVKALPENLPDFIEADITEMKIGAKMYTKSIET 160
Query: 230 HPALKLLRSKDEPVCKIAGGR 250
K++ ++ +C++ R
Sbjct: 161 D-NFKIMHPENTVICQVRTSR 180
>gi|317126792|ref|YP_004093074.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus
cellulosilyticus DSM 2522]
gi|315471740|gb|ADU28343.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus
cellulosilyticus DSM 2522]
Length = 212
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 20/184 (10%)
Query: 63 GTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLE 122
G+R++ K R G VP +++ G+ GNK ++V+ + + K++ GR+ +F L+
Sbjct: 14 GSRLN-KIRNDGNVPGVIY----GKTIGNKP-VTVEGSSLLKMIRENGRN----GVFKLD 63
Query: 123 VRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPG 182
V + + +I ++V P K + ++V F A ++ L DVP+ G+ + G
Sbjct: 64 VDGQ-QTDVMIYDIQVDPLKNEV-------IHVDFYAADMKSELDADVPVQAVGEAI--G 113
Query: 183 LRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEP 242
++ GG L V + +P I++D+S+LDV + DLK ++ +E
Sbjct: 114 VKNGGVLQQSLHEVSVKALPNDLPDSIEIDVSQLDVNDSLQVKDLKTSGKYEINNDPEES 173
Query: 243 VCKI 246
V I
Sbjct: 174 VLSI 177
>gi|53804648|ref|YP_113532.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylococcus
capsulatus str. Bath]
gi|68053083|sp|Q60A15.1|RL25_METCA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|53758409|gb|AAU92700.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylococcus
capsulatus str. Bath]
Length = 202
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G S + R AG+VP++++ GG +S+ + K+V +L S +
Sbjct: 12 RHQLGKGASRRLRHAGKVPAVLY-------GGGGEPVSLLLDH-HKVVKNLENEATYSHV 63
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
+ D E+ +L + V H +++ F R +++ VPL F +
Sbjct: 64 LTIRF-------DGREENAIL-KAVQRHPAKPVVMHLDFQRVSAADKIRVHVPLHFINQE 115
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
S G++KGG ++ V+ C +P YI+VDL+++D+ I DLK+
Sbjct: 116 SSVGVKKGGVVSHGMVDVEVDCLPKDLPEYIEVDLAQVDIGGIIHLSDLKL 166
>gi|418993213|ref|ZP_13540853.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG290]
gi|377747273|gb|EHT71238.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG290]
Length = 217
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 88/194 (45%), Gaps = 24/194 (12%)
Query: 56 AIPRASPGTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIR--KLVGHLGRS 112
+I R TR +K+ RK+G+VP++V+ G + +SV+ +++ K++ +GR+
Sbjct: 6 SIIRQGKQTRSDLKQLRKSGKVPAVVY-------GYGTKNVSVKVDEVEFIKVIREVGRN 58
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ E G G + ++V+ + ++ FL ++VP+
Sbjct: 59 GVI----------ELGVGS--KTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPV 106
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
G+ V G ++GG + ++ D +P I+VD++EL++ + D+KV
Sbjct: 107 QLVGEAV--GAKEGGVVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGD 164
Query: 233 LKLLRSKDEPVCKI 246
K+ E V +
Sbjct: 165 FKIENDSAESVVTV 178
>gi|297591588|ref|ZP_06950225.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MN8]
gi|300910355|ref|ZP_07127808.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
TCH70]
gi|384865904|ref|YP_005746100.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
TCH60]
gi|422742504|ref|ZP_16796508.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422747257|ref|ZP_16801175.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus MRSA131]
gi|297575457|gb|EFH94174.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MN8]
gi|300888344|gb|EFK83531.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
TCH70]
gi|312436409|gb|ADQ75480.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
TCH60]
gi|320139412|gb|EFW31290.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144189|gb|EFW35957.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus MRSA177]
gi|408422937|emb|CCJ10348.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
ST228]
gi|408424925|emb|CCJ12312.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
ST228]
gi|408426914|emb|CCJ14277.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
ST228]
gi|408428902|emb|CCJ26067.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
ST228]
gi|408430890|emb|CCJ18205.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
ST228]
gi|408432884|emb|CCJ20169.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
ST228]
gi|408434873|emb|CCJ22133.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
ST228]
gi|408436858|emb|CCJ24101.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
ST228]
Length = 219
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 56 AIPRASPGTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIR--KLVGHLGRS 112
+I R TR +K+ RK+G+VP++V+ G + +SV+ +++ K++ +GR+
Sbjct: 8 SIIRQGKQTRSDLKQLRKSGKVPAVVY-------GYGTKNVSVKVDEVEFIKVIREVGRN 60
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ E G G + ++V+ + ++ FL ++VP+
Sbjct: 61 GVI----------ELGVGS--KTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPV 108
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
G+ V G ++GG + ++ D +P I+VD++EL++ + D+KV
Sbjct: 109 QLVGEAV--GAKEGGVVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGD 166
Query: 233 LKLLRSKDEPVCKIAG 248
K+ E V +
Sbjct: 167 FKIENDSAESVVTVVA 182
>gi|262407250|ref|ZP_06083798.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_22]
gi|293370794|ref|ZP_06617340.1| ribosomal protein L25, Ctc-form [Bacteroides ovatus SD CMC 3f]
gi|294644676|ref|ZP_06722426.1| ribosomal protein L25, Ctc-form [Bacteroides ovatus SD CC 2a]
gi|294809063|ref|ZP_06767785.1| ribosomal protein L25, Ctc-form [Bacteroides xylanisolvens SD CC
1b]
gi|298482671|ref|ZP_07000855.1| ribosomal protein L25, Ctc-form [Bacteroides sp. D22]
gi|336405873|ref|ZP_08586540.1| 50S ribosomal protein L25 [Bacteroides sp. 1_1_30]
gi|345509684|ref|ZP_08789276.1| 50S ribosomal protein L25 [Bacteroides sp. D1]
gi|423212606|ref|ZP_17199135.1| 50S ribosomal protein L25 [Bacteroides xylanisolvens CL03T12C04]
gi|229446446|gb|EEO52237.1| 50S ribosomal protein L25 [Bacteroides sp. D1]
gi|262354058|gb|EEZ03150.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_22]
gi|292634154|gb|EFF52697.1| ribosomal protein L25, Ctc-form [Bacteroides ovatus SD CMC 3f]
gi|292640010|gb|EFF58278.1| ribosomal protein L25, Ctc-form [Bacteroides ovatus SD CC 2a]
gi|294443788|gb|EFG12533.1| ribosomal protein L25, Ctc-form [Bacteroides xylanisolvens SD CC
1b]
gi|295087142|emb|CBK68665.1| LSU ribosomal protein L25P [Bacteroides xylanisolvens XB1A]
gi|298271134|gb|EFI12711.1| ribosomal protein L25, Ctc-form [Bacteroides sp. D22]
gi|335936340|gb|EGM98271.1| 50S ribosomal protein L25 [Bacteroides sp. 1_1_30]
gi|392694464|gb|EIY87691.1| 50S ribosomal protein L25 [Bacteroides xylanisolvens CL03T12C04]
Length = 196
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 24/189 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQ-IRKLVGHLGRSFFVSR 117
R+S R + RK G VP +++ GGN+ + TN+ +R LV + + V
Sbjct: 16 RSSEQARALKEIRKNGGVPCVLY-------GGNEVVHFTVTNEGLRNLV-YTPHIYVVDL 67
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
+ D + KV + + + H D L+V F + + ++VP+ G
Sbjct: 68 IIDGK------------KVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLEG- 114
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
++ G++ GG L R +K +++P + V++S L + + + G+L L+L+
Sbjct: 115 -LAEGVKAGGKLALQMRKIKVKALYNVIPEKLTVNVSHLGLGKTVKVGELS-FEGLELIS 172
Query: 238 SKDEPVCKI 246
+K+ VC +
Sbjct: 173 AKEAVVCAV 181
>gi|425738704|ref|ZP_18856961.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus massiliensis S46]
gi|425478975|gb|EKU46157.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus massiliensis S46]
Length = 219
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 69 KERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIR--KLVGHLGRSFFVSRLFDLEVRSE 126
K R+AG+VP++V+ G + +SV+ +++ K++ +GR+ + E
Sbjct: 20 KIREAGKVPAVVY-------GYGTKNVSVKVDEVEFIKVIREVGRNGVI----------E 62
Query: 127 FGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKG 186
G G ++V+V+ + ++ FL ++VP+ G+ V G ++G
Sbjct: 63 LGVGS--KQVKVMVSDYQFDPLKNKITHIDFLAINMTEERTVEVPVHLVGEAV--GAKEG 118
Query: 187 GYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
G + ++ D +P YI+VD++EL++ + D+K+ + K++ V +
Sbjct: 119 GVVEQPLFDLEVTATPDNIPEYIEVDITELEINDSLTVADVKIDGDYTIENEKEDSVVAV 178
Query: 247 A 247
Sbjct: 179 V 179
>gi|212691832|ref|ZP_03299960.1| hypothetical protein BACDOR_01327 [Bacteroides dorei DSM 17855]
gi|237708038|ref|ZP_04538519.1| 50S ribosomal protein L25 [Bacteroides sp. 9_1_42FAA]
gi|265756187|ref|ZP_06090516.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_33FAA]
gi|345516493|ref|ZP_08795983.1| 50S ribosomal protein L25 [Bacteroides dorei 5_1_36/D4]
gi|423232193|ref|ZP_17218595.1| 50S ribosomal protein L25 [Bacteroides dorei CL02T00C15]
gi|423242006|ref|ZP_17223117.1| 50S ribosomal protein L25 [Bacteroides dorei CL03T12C01]
gi|423246744|ref|ZP_17227797.1| 50S ribosomal protein L25 [Bacteroides dorei CL02T12C06]
gi|212665588|gb|EEB26160.1| ribosomal protein L25, Ctc-form [Bacteroides dorei DSM 17855]
gi|229437006|gb|EEO47083.1| 50S ribosomal protein L25 [Bacteroides dorei 5_1_36/D4]
gi|229457866|gb|EEO63587.1| 50S ribosomal protein L25 [Bacteroides sp. 9_1_42FAA]
gi|263233778|gb|EEZ19387.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_33FAA]
gi|392625257|gb|EIY19328.1| 50S ribosomal protein L25 [Bacteroides dorei CL02T00C15]
gi|392634720|gb|EIY28634.1| 50S ribosomal protein L25 [Bacteroides dorei CL02T12C06]
gi|392640235|gb|EIY34040.1| 50S ribosomal protein L25 [Bacteroides dorei CL03T12C01]
Length = 198
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 21/191 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHG-GNKRLISVQTNQIRKLVGHLGRSFFVSR 117
R G + + + RK VP +++ + ++G SV T +R LV +
Sbjct: 11 RTDVGKKATHELRKNNGVPCVLYGVQKDENGLPVATHFSVPTEGLRNLV-------YTPH 63
Query: 118 LF--DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
++ DL + + V + + + H TDA L+V F + + ++VP+
Sbjct: 64 IYVVDLNIDGKI--------VNAILKDIQFHPVTDAILHVDFYQIDEAKPIVMEVPVQLE 115
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G ++ G+R GG L R +K +++P + VD++ L + + I G+L + L+L
Sbjct: 116 G--LAEGVRAGGKLALQLRKLKVKALYNVIPERLVVDVTSLGLGKTIKVGELS-YEGLEL 172
Query: 236 LRSKDEPVCKI 246
+ +K+ VC +
Sbjct: 173 INAKEAVVCAV 183
>gi|15923491|ref|NP_371025.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926178|ref|NP_373711.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
N315]
gi|21282185|ref|NP_645273.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus MW2]
gi|49485365|ref|YP_042586.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650042|ref|YP_185433.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus COL]
gi|82750208|ref|YP_415949.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus RF122]
gi|87162260|ref|YP_493188.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88194261|ref|YP_499053.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|148266960|ref|YP_001245903.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus JH9]
gi|150393006|ref|YP_001315681.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus JH1]
gi|151220676|ref|YP_001331498.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus str. Newman]
gi|156978829|ref|YP_001441088.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus Mu3]
gi|161508741|ref|YP_001574400.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|221142307|ref|ZP_03566800.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus str. JKD6009]
gi|253315230|ref|ZP_04838443.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|253730969|ref|ZP_04865134.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253735236|ref|ZP_04869401.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus TCH130]
gi|255005294|ref|ZP_05143895.2| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257424613|ref|ZP_05601041.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257427279|ref|ZP_05603680.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257429916|ref|ZP_05606302.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus 68-397]
gi|257432618|ref|ZP_05608980.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus E1410]
gi|257435522|ref|ZP_05611572.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus M876]
gi|257794258|ref|ZP_05643237.1| 50S ribosomal protein L25 [Staphylococcus aureus A9781]
gi|258407225|ref|ZP_05680370.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Staphylococcus aureus A9763]
gi|258420808|ref|ZP_05683744.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus A9719]
gi|258424463|ref|ZP_05687342.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus A9635]
gi|258429618|ref|ZP_05688292.1| ribosomal protein L25 [Staphylococcus aureus A9299]
gi|258446112|ref|ZP_05694273.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus A6300]
gi|258448020|ref|ZP_05696150.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Staphylococcus aureus A6224]
gi|258452818|ref|ZP_05700813.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus A5948]
gi|258453834|ref|ZP_05701807.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Staphylococcus aureus A5937]
gi|262049986|ref|ZP_06022845.1| 50S ribosomal protein L25 [Staphylococcus aureus D30]
gi|262052530|ref|ZP_06024727.1| 50S ribosomal protein L25 [Staphylococcus aureus 930918-3]
gi|269202121|ref|YP_003281390.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus ED98]
gi|282895109|ref|ZP_06303329.1| 50S ribosomal protein L25 [Staphylococcus aureus A8117]
gi|282903087|ref|ZP_06310979.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus C160]
gi|282904876|ref|ZP_06312736.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282907823|ref|ZP_06315661.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282910139|ref|ZP_06317945.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282913329|ref|ZP_06321120.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus M899]
gi|282915819|ref|ZP_06323587.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
D139]
gi|282918282|ref|ZP_06326022.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
C427]
gi|282923033|ref|ZP_06330719.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
C101]
gi|282925576|ref|ZP_06333229.1| 50S ribosomal protein L25, Ctc-form [Staphylococcus aureus A9765]
gi|283768936|ref|ZP_06341845.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus H19]
gi|283957291|ref|ZP_06374749.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus A017934/97]
gi|284023510|ref|ZP_06377908.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus 132]
gi|293500378|ref|ZP_06666230.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
58-424]
gi|293509316|ref|ZP_06668032.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
M809]
gi|293515905|ref|ZP_06670595.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus M1015]
gi|294850361|ref|ZP_06791094.1| 50S ribosomal protein L25 [Staphylococcus aureus A9754]
gi|295407391|ref|ZP_06817188.1| 50S ribosomal protein L25 [Staphylococcus aureus A8819]
gi|295427035|ref|ZP_06819672.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296276154|ref|ZP_06858661.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus MR1]
gi|297246471|ref|ZP_06930311.1| 50S ribosomal protein L25 [Staphylococcus aureus A8796]
gi|304380518|ref|ZP_07363195.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|379013782|ref|YP_005290018.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus VC40]
gi|379020271|ref|YP_005296933.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
M013]
gi|379794972|ref|YP_005324970.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp.
aureus MSHR1132]
gi|384546780|ref|YP_005736033.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus ED133]
gi|384549365|ref|YP_005738617.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp.
aureus JKD6159]
gi|384861163|ref|YP_005743883.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|384863829|ref|YP_005749188.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|384869085|ref|YP_005751799.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
T0131]
gi|385780766|ref|YP_005756937.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
11819-97]
gi|386830144|ref|YP_006236798.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387142189|ref|YP_005730582.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp.
aureus TW20]
gi|387149661|ref|YP_005741225.1| 50S ribosomalprotein L25p [Staphylococcus aureus 04-02981]
gi|387601855|ref|YP_005733376.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus ST398]
gi|387779639|ref|YP_005754437.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp.
aureus LGA251]
gi|404477883|ref|YP_006709314.1| 50S ribosomal protein L25 [Staphylococcus aureus 08BA02176]
gi|415689613|ref|ZP_11452872.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus CGS01]
gi|415694301|ref|ZP_11455827.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus CGS03]
gi|416842434|ref|ZP_11905015.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus O11]
gi|416847786|ref|ZP_11907370.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus O46]
gi|417648745|ref|ZP_12298564.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21189]
gi|417652222|ref|ZP_12301973.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21172]
gi|417654403|ref|ZP_12304124.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21193]
gi|417797733|ref|ZP_12444925.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21305]
gi|417798426|ref|ZP_12445593.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21310]
gi|417800567|ref|ZP_12447682.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21318]
gi|417888522|ref|ZP_12532630.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21195]
gi|417891611|ref|ZP_12535672.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21200]
gi|417892283|ref|ZP_12536334.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21201]
gi|417896652|ref|ZP_12540597.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21235]
gi|417899045|ref|ZP_12542956.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21259]
gi|417900640|ref|ZP_12544521.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21266]
gi|417903845|ref|ZP_12547679.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21269]
gi|418276815|ref|ZP_12891630.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21178]
gi|418281837|ref|ZP_12894636.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21202]
gi|418284569|ref|ZP_12897287.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21209]
gi|418307971|ref|ZP_12919641.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21194]
gi|418310698|ref|ZP_12922233.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21331]
gi|418312123|ref|ZP_12923634.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21334]
gi|418316045|ref|ZP_12927491.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21340]
gi|418318428|ref|ZP_12929831.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21232]
gi|418320560|ref|ZP_12931917.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus VCU006]
gi|418423670|ref|ZP_12996819.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
VRS1]
gi|418426614|ref|ZP_12999642.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418429540|ref|ZP_13002474.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|418432435|ref|ZP_13005237.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418436151|ref|ZP_13007969.1| hypothetical protein MQI_02121 [Staphylococcus aureus subsp. aureus
VRS5]
gi|418439046|ref|ZP_13010770.1| hypothetical protein MQK_02109 [Staphylococcus aureus subsp. aureus
VRS6]
gi|418442029|ref|ZP_13013648.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418445154|ref|ZP_13016648.1| hypothetical protein MQO_02246 [Staphylococcus aureus subsp. aureus
VRS8]
gi|418448096|ref|ZP_13019504.1| hypothetical protein MQQ_02319 [Staphylococcus aureus subsp. aureus
VRS9]
gi|418450922|ref|ZP_13022265.1| hypothetical protein MQS_02506 [Staphylococcus aureus subsp. aureus
VRS10]
gi|418453939|ref|ZP_13025213.1| hypothetical protein MQU_02471 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418456843|ref|ZP_13028059.1| hypothetical protein MQW_02509 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418559624|ref|ZP_13124162.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21252]
gi|418561449|ref|ZP_13125939.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21262]
gi|418565523|ref|ZP_13129923.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21264]
gi|418567828|ref|ZP_13132191.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21272]
gi|418571184|ref|ZP_13135427.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21283]
gi|418573256|ref|ZP_13137455.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21333]
gi|418580104|ref|ZP_13144193.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418581172|ref|ZP_13145256.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418596741|ref|ZP_13160293.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21342]
gi|418599398|ref|ZP_13162883.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21343]
gi|418601109|ref|ZP_13164552.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21345]
gi|418638225|ref|ZP_13200527.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-3]
gi|418642116|ref|ZP_13204316.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-24]
gi|418644609|ref|ZP_13206750.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-55]
gi|418648479|ref|ZP_13210522.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-88]
gi|418651232|ref|ZP_13213241.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-91]
gi|418653659|ref|ZP_13215595.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-99]
gi|418657225|ref|ZP_13219001.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-105]
gi|418658058|ref|ZP_13219803.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-111]
gi|418662419|ref|ZP_13223969.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-122]
gi|418873750|ref|ZP_13428032.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-125]
gi|418874517|ref|ZP_13428784.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIGC93]
gi|418878796|ref|ZP_13433029.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418880205|ref|ZP_13434426.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418883133|ref|ZP_13437334.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418885794|ref|ZP_13439945.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418888400|ref|ZP_13442538.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1524]
gi|418891066|ref|ZP_13445185.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418893958|ref|ZP_13448060.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418896883|ref|ZP_13450957.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418901590|ref|ZP_13455640.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418902760|ref|ZP_13456802.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418907114|ref|ZP_13461134.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|418908251|ref|ZP_13462260.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG149]
gi|418911168|ref|ZP_13465152.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG547]
gi|418914968|ref|ZP_13468937.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418917796|ref|ZP_13471753.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418919315|ref|ZP_13473262.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418922130|ref|ZP_13476048.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418924725|ref|ZP_13478629.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418927814|ref|ZP_13481701.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418930527|ref|ZP_13484376.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418934830|ref|ZP_13488650.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418946680|ref|ZP_13499095.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-157]
gi|418950481|ref|ZP_13502654.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-160]
gi|418953508|ref|ZP_13505499.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-189]
gi|418982904|ref|ZP_13530610.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418984998|ref|ZP_13532689.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1500]
gi|418988925|ref|ZP_13536595.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1835]
gi|418990391|ref|ZP_13538053.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1096]
gi|419774475|ref|ZP_14300442.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CO-23]
gi|419784373|ref|ZP_14310142.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-M]
gi|421150863|ref|ZP_15610515.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus str. Newbould 305]
gi|424768342|ref|ZP_18195627.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CM05]
gi|424784353|ref|ZP_18211164.1| LSU ribosomal protein L25p [Staphylococcus aureus CN79]
gi|440707790|ref|ZP_20888475.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21282]
gi|440736498|ref|ZP_20916097.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus DSM
20231]
gi|443636489|ref|ZP_21120596.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21236]
gi|443638636|ref|ZP_21122674.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21196]
gi|448741239|ref|ZP_21723207.1| 50S ribosomal protein L25 [Staphylococcus aureus KT/314250]
gi|448745281|ref|ZP_21727141.1| 50S ribosomal protein L25 [Staphylococcus aureus KT/Y21]
gi|68053029|sp|Q5HIH4.1|RL25_STAAC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71153660|sp|Q99WA2.1|RL25_STAAM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71153661|sp|Q7A7B3.1|RL25_STAAN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71153663|sp|Q6GBY7.1|RL25_STAAS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71153664|sp|Q7A1S4.1|RL25_STAAW RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|109893398|sp|Q2FJE0.1|RL25_STAA3 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|109893399|sp|Q2YVY4.1|RL25_STAAB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|13700391|dbj|BAB41689.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
N315]
gi|14246269|dbj|BAB56663.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
Mu50]
gi|21203621|dbj|BAB94321.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus MW2]
gi|49243808|emb|CAG42233.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57284228|gb|AAW36322.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus COL]
gi|82655739|emb|CAI80138.1| 50S ribosomal protein L25 general stress protein [Staphylococcus
aureus RF122]
gi|87128234|gb|ABD22748.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87201819|gb|ABD29629.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147740029|gb|ABQ48327.1| LSU ribosomal protein L25P [Staphylococcus aureus subsp. aureus
JH9]
gi|149945458|gb|ABR51394.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Staphylococcus aureus subsp. aureus JH1]
gi|150373476|dbj|BAF66736.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156720964|dbj|BAF77381.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus Mu3]
gi|160367550|gb|ABX28521.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253725281|gb|EES94010.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253726796|gb|EES95525.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus TCH130]
gi|257272640|gb|EEV04760.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275930|gb|EEV07398.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257279432|gb|EEV10027.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus 68-397]
gi|257282483|gb|EEV12616.1| ribosomal protein L25 [Staphylococcus aureus subsp. aureus E1410]
gi|257285159|gb|EEV15276.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus M876]
gi|257788230|gb|EEV26570.1| 50S ribosomal protein L25 [Staphylococcus aureus A9781]
gi|257841183|gb|EEV65632.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Staphylococcus aureus A9763]
gi|257843200|gb|EEV67613.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus A9719]
gi|257845332|gb|EEV69367.1| LSU ribosomal protein L25, Ctc-form [Staphylococcus aureus A9635]
gi|257849677|gb|EEV73644.1| ribosomal protein L25 [Staphylococcus aureus A9299]
gi|257855089|gb|EEV78031.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus A6300]
gi|257858710|gb|EEV81583.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Staphylococcus aureus A6224]
gi|257859504|gb|EEV82357.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus A5948]
gi|257864005|gb|EEV86760.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Staphylococcus aureus A5937]
gi|259159577|gb|EEW44624.1| 50S ribosomal protein L25 [Staphylococcus aureus 930918-3]
gi|259161921|gb|EEW46504.1| 50S ribosomal protein L25 [Staphylococcus aureus D30]
gi|262074411|gb|ACY10384.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus ED98]
gi|269940072|emb|CBI48448.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp.
aureus TW20]
gi|282314552|gb|EFB44939.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
C101]
gi|282317848|gb|EFB48217.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
C427]
gi|282320310|gb|EFB50652.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
D139]
gi|282322800|gb|EFB53120.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus M899]
gi|282325987|gb|EFB56293.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282328299|gb|EFB58574.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282331993|gb|EFB61502.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282592480|gb|EFB97492.1| 50S ribosomal protein L25, Ctc-form [Staphylococcus aureus A9765]
gi|282596513|gb|EFC01473.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus C160]
gi|282762527|gb|EFC02667.1| 50S ribosomal protein L25 [Staphylococcus aureus A8117]
gi|283461117|gb|EFC08203.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus H19]
gi|283469793|emb|CAQ49004.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus ST398]
gi|283791215|gb|EFC30025.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus A017934/97]
gi|285816200|gb|ADC36687.1| LSU ribosomal protein L25p [Staphylococcus aureus 04-02981]
gi|290921313|gb|EFD98371.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus M1015]
gi|291096338|gb|EFE26598.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
58-424]
gi|291467861|gb|EFF10371.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
M809]
gi|294822785|gb|EFG39221.1| 50S ribosomal protein L25 [Staphylococcus aureus A9754]
gi|294967748|gb|EFG43780.1| 50S ribosomal protein L25 [Staphylococcus aureus A8819]
gi|295129038|gb|EFG58667.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297176658|gb|EFH35920.1| 50S ribosomal protein L25 [Staphylococcus aureus A8796]
gi|298693831|gb|ADI97053.1| ribosomal Protein L25 [Staphylococcus aureus subsp. aureus ED133]
gi|302332214|gb|ADL22407.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302750392|gb|ADL64569.1| 50S ribosomal protein L25 Ctc-form [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340963|gb|EFM06886.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312828996|emb|CBX33838.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315128629|gb|EFT84632.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus CGS03]
gi|315196184|gb|EFU26540.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus CGS01]
gi|323438733|gb|EGA96473.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus O11]
gi|323442055|gb|EGA99690.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus O46]
gi|329313220|gb|AEB87633.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
T0131]
gi|329725045|gb|EGG61540.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21172]
gi|329729782|gb|EGG66179.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21189]
gi|329731082|gb|EGG67454.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21193]
gi|334266204|gb|EGL84687.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21305]
gi|334275945|gb|EGL94218.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21310]
gi|334277839|gb|EGL96056.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21318]
gi|341840492|gb|EGS81996.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21235]
gi|341846783|gb|EGS87973.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21259]
gi|341847472|gb|EGS88652.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21266]
gi|341848893|gb|EGS90049.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21269]
gi|341851838|gb|EGS92745.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21200]
gi|341855017|gb|EGS95875.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21195]
gi|341857904|gb|EGS98711.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21201]
gi|344176741|emb|CCC87203.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp.
aureus LGA251]
gi|356871962|emb|CCE58301.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp.
aureus MSHR1132]
gi|359829580|gb|AEV77558.1| LSU ribosomal protein L25p [Staphylococcus aureus subsp. aureus
M013]
gi|364521755|gb|AEW64505.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 11819-97]
gi|365172217|gb|EHM62945.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21202]
gi|365173229|gb|EHM63813.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21209]
gi|365173993|gb|EHM64394.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21178]
gi|365227051|gb|EHM68258.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus VCU006]
gi|365236219|gb|EHM77119.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21331]
gi|365238798|gb|EHM79627.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21334]
gi|365242015|gb|EHM82743.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21340]
gi|365242687|gb|EHM83388.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21194]
gi|365243045|gb|EHM83737.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21232]
gi|371973175|gb|EHO90534.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21264]
gi|371974644|gb|EHO91964.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21252]
gi|371977527|gb|EHO94794.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21262]
gi|371981203|gb|EHO98388.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21283]
gi|371981499|gb|EHO98673.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21272]
gi|371982579|gb|EHO99729.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21333]
gi|374362479|gb|AEZ36584.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus VC40]
gi|374396681|gb|EHQ67908.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21342]
gi|374396927|gb|EHQ68146.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21343]
gi|374399854|gb|EHQ70987.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21345]
gi|375017647|gb|EHS11255.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-24]
gi|375018507|gb|EHS12085.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-99]
gi|375022928|gb|EHS16395.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-3]
gi|375025128|gb|EHS18536.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-55]
gi|375026104|gb|EHS19492.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-88]
gi|375026242|gb|EHS19626.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-91]
gi|375031228|gb|EHS24515.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-105]
gi|375036470|gb|EHS29541.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-122]
gi|375039363|gb|EHS32293.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-111]
gi|375365890|gb|EHS69915.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-125]
gi|375374893|gb|EHS78508.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-189]
gi|375376903|gb|EHS80406.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-160]
gi|375377608|gb|EHS81061.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-157]
gi|377693074|gb|EHT17450.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377693302|gb|EHT17675.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377700073|gb|EHT24418.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377700682|gb|EHT25017.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377703414|gb|EHT27729.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377708212|gb|EHT32502.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377712216|gb|EHT36437.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377716785|gb|EHT40966.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377716819|gb|EHT40999.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377716864|gb|EHT41043.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377723820|gb|EHT47942.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377725359|gb|EHT49473.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG547]
gi|377727606|gb|EHT51711.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377733050|gb|EHT57097.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377733140|gb|EHT57186.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377736310|gb|EHT60336.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377739142|gb|EHT63149.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377743397|gb|EHT67379.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377747027|gb|EHT70995.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377749431|gb|EHT73380.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377755244|gb|EHT79147.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG1524]
gi|377755320|gb|EHT79221.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377757052|gb|EHT80947.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIG149]
gi|377761346|gb|EHT85220.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377762370|gb|EHT86235.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|377767527|gb|EHT91322.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIGC348]
gi|377769827|gb|EHT93594.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIGC128]
gi|377772264|gb|EHT96015.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CIGC93]
gi|383364119|gb|EID41439.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus IS-M]
gi|383971751|gb|EID87816.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CO-23]
gi|385195536|emb|CCG15145.1| putative 50S ribosomal protein L25 [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387721175|gb|EIK09056.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387721214|gb|EIK09094.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387722606|gb|EIK10395.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387727659|gb|EIK15166.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387729598|gb|EIK17029.1| hypothetical protein MQI_02121 [Staphylococcus aureus subsp. aureus
VRS5]
gi|387731694|gb|EIK18960.1| hypothetical protein MQK_02109 [Staphylococcus aureus subsp. aureus
VRS6]
gi|387738608|gb|EIK25640.1| hypothetical protein MQO_02246 [Staphylococcus aureus subsp. aureus
VRS8]
gi|387739761|gb|EIK26749.1| hypothetical protein MQQ_02319 [Staphylococcus aureus subsp. aureus
VRS9]
gi|387740020|gb|EIK26993.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387747061|gb|EIK33776.1| hypothetical protein MQS_02506 [Staphylococcus aureus subsp. aureus
VRS10]
gi|387748398|gb|EIK35081.1| hypothetical protein MQU_02471 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387749225|gb|EIK35865.1| hypothetical protein MQW_02509 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|394329083|gb|EJE55206.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus aureus subsp. aureus str. Newbould 305]
gi|402348616|gb|EJU83597.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus CM05]
gi|404439372|gb|AFR72565.1| putative 50S ribosomal protein L25 [Staphylococcus aureus
08BA02176]
gi|421957271|gb|EKU09594.1| LSU ribosomal protein L25p [Staphylococcus aureus CN79]
gi|436429598|gb|ELP26964.1| 50S ribosomal protein L25 [Staphylococcus aureus subsp. aureus DSM
20231]
gi|436505644|gb|ELP41532.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21282]
gi|443407665|gb|ELS66210.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21236]
gi|443408957|gb|ELS67465.1| ribosomal protein L25, Ctc-form [Staphylococcus aureus subsp.
aureus 21196]
gi|445548031|gb|ELY16289.1| 50S ribosomal protein L25 [Staphylococcus aureus KT/314250]
gi|445561403|gb|ELY17607.1| 50S ribosomal protein L25 [Staphylococcus aureus KT/Y21]
Length = 217
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 56 AIPRASPGTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIR--KLVGHLGRS 112
+I R TR +K+ RK+G+VP++V+ G + +SV+ +++ K++ +GR+
Sbjct: 6 SIIRQGKQTRSDLKQLRKSGKVPAVVY-------GYGTKNVSVKVDEVEFIKVIREVGRN 58
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ E G G + ++V+ + ++ FL ++VP+
Sbjct: 59 GVI----------ELGVGS--KTIKVMVADYQFDPLKNQITHIDFLAINMSEERTVEVPV 106
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
G+ V G ++GG + ++ D +P I+VD++EL++ + D+KV
Sbjct: 107 QLVGEAV--GAKEGGVVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVKVTGD 164
Query: 233 LKLLRSKDEPVCKIAG 248
K+ E V +
Sbjct: 165 FKIENDSAESVVTVVA 180
>gi|399926744|ref|ZP_10784102.1| 50S ribosomal protein L25/general stress protein Ctc [Myroides
injenensis M09-0166]
Length = 202
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 24/196 (12%)
Query: 53 TILAIPRASPGTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGR 111
TI R S G +VS K R AG VP +++ GG + + + + G +
Sbjct: 5 TIKGSERESVG-KVSTKALRNAGMVPCVLY-------GGTEPAVHFAAEE-KAFKGLVYT 55
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
+ + DLE +F + + + + H TD L++ F + + + ++VP
Sbjct: 56 PNVHTVVIDLENGKKFNA---------ILQDIQFHPVTDEILHIDFYQLHDDKEITLEVP 106
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKF-LCPADIVPPYIDVDLSELDVEQKILAGDLKVH 230
+ G+ S G+ GG LN R +K PA++ P +++V++S LD+ K+ D+ V
Sbjct: 107 VKVVGN--SKGVMAGGVLNLNLRKLKVKALPANL-PDFVEVNISNLDMGNKLYVTDV-VA 162
Query: 231 PALKLLRSKDEPVCKI 246
KLL + VC++
Sbjct: 163 NNYKLLHPDNTVVCQV 178
>gi|388259161|ref|ZP_10136335.1| ribosomal protein L25/general stress protein Ctc [Cellvibrio sp.
BR]
gi|387937119|gb|EIK43676.1| ribosomal protein L25/general stress protein Ctc [Cellvibrio sp.
BR]
Length = 202
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R A +VP++++ GGN ISV ++ +L+ HL F S + L V + +
Sbjct: 25 RLAKQVPAVIY-------GGNVAPISVSVSE-NELMKHLEHEAFYSHIISLNV--DGAAQ 74
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLR-KGGYL 189
D+I K V H L++ FLR + VPL F + S G++ +GG +
Sbjct: 75 DVILK------DVQRHPSKPVVLHLDFLRIDKSTKVHTHVPLHFINEAGSKGVKIQGGKV 128
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+ +C +P +I+VDL++ +V I DLK+
Sbjct: 129 VHNLTQLDIICFPHQLPEFIEVDLADAEVGTIIHISDLKL 168
>gi|389580921|ref|ZP_10170948.1| ribosomal protein L25, Ctc-form [Desulfobacter postgatei 2ac9]
gi|389402556|gb|EIM64778.1| ribosomal protein L25, Ctc-form [Desulfobacter postgatei 2ac9]
Length = 207
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK---RLISVQTNQIRKLVGHLGRSFFV 115
R S G + K R +P IV+ G K +S+ N K++ G +
Sbjct: 11 RESTGKGAAKKLRADNAIPGIVY--------GAKIEPVKVSIDVNTFDKVIRENGTTGL- 61
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
FDL+V E +G + V+ +++ + ++ F +A + I VP+ +
Sbjct: 62 --FFDLKVEGEGETGRM-----VMLKEIQMDPFGLRYQHIDFHEIDMDATVSIVVPVEVQ 114
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G S G+++GG + I+R ++ +C P I +D+SEL++ I D+ + +++
Sbjct: 115 G--TSAGVKEGGMVQIIRRDLEVICKPKDTPESIKLDISELEIGDSIHVADIDLGAEIEI 172
>gi|338733705|ref|YP_004672178.1| 50S ribosomal protein L25 [Simkania negevensis Z]
gi|336483088|emb|CCB89687.1| 50S ribosomal protein L25 [Simkania negevensis Z]
Length = 185
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Query: 76 VPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEK 135
+P+++++ +G+ G N V ++ ++ L + + + +F+L++ + K
Sbjct: 25 IPAVIYQ--NGKPGENA---IVNGSEFHTILRGLQKGYLPTTIFELDLDGK--------K 71
Query: 136 VRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRT 195
+ + + + H T L++ FL + + + VP+ F G G++ GG+L + R
Sbjct: 72 SKAIVKDIQYHPTTYQILHLDFLLLSDDVPVDVKVPISFEGQADCVGIKLGGFLRPVIRH 131
Query: 196 VKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA 247
V+ C +P VD+ L + Q+ D+++ A++ L E V IA
Sbjct: 132 VRVRCLPKDIPTDFKVDVRSLAIGQEKRIRDIEMGDAIRTLVRPQEVVVVIA 183
>gi|422348782|ref|ZP_16429674.1| ribosomal protein L25, Ctc-form [Sutterella wadsworthensis
2_1_59BFAA]
gi|404658834|gb|EKB31696.1| ribosomal protein L25, Ctc-form [Sutterella wadsworthensis
2_1_59BFAA]
Length = 203
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 17/178 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
I+A R GT S + R+A ++P IV+ GGN ++ + L +
Sbjct: 2 NIIATTRNVQGTGASRRLRRADKLPGIVY-------GGNLPATPIELEH-NPIFYALRKE 53
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F + + +E+ D E++ VL R +H +++ F R P + + VPL
Sbjct: 54 KFHASILTMEL-------DGKEELVVL-RAFQMHPYKPQVMHIDFQRINPNEKVTMRVPL 105
Query: 173 VFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F+G++ SP ++ ++ ++ C +P +I VDLS+L+ Q A L++
Sbjct: 106 HFQGEEESPAVKVSKCIVSHAVSAIEVTCMPKELPEFITVDLSKLEAGQTFHASMLQL 163
>gi|408418648|ref|YP_006760062.1| 50S ribosomal protein L25 RplY [Desulfobacula toluolica Tol2]
gi|405105861|emb|CCK79358.1| RplY: 50S ribosomal protein L25 [Desulfobacula toluolica Tol2]
Length = 215
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G V+ K R+ +P+IV+ + + ++S+ T +++ G +
Sbjct: 11 REKSGKGVARKLRRNNEIPAIVYGAKK-----DSMMLSLDTVAFDRIIRKNGS---MGLF 62
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
F+L+V GD E+ V+ + + + + L++ + + I VP+ GD
Sbjct: 63 FNLKV-----GGDSGEEKMVMLKNMQMDTFGLKYLHIDLHEIDMDNQVSITVPVEAVGD- 116
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
S G+++GG L I+R + LC P I VD+S+LDV + D+ + +++
Sbjct: 117 -SKGVKEGGLLQIIRRELDVLCKPTDAPDSIKVDISDLDVGDAVHVEDIDLGEGIEI 172
>gi|283780445|ref|YP_003371200.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pirellula
staleyi DSM 6068]
gi|283438898|gb|ADB17340.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pirellula
staleyi DSM 6068]
Length = 208
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 22/176 (12%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGR 111
ET+ R GT + + R G+VP++++ HG ++V + +I V H G+
Sbjct: 4 ETLNVTKRDKLGTANNRRLRYTGKVPAVLY-----GHGEASISLTVASEEIWAAVKHGGK 58
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
L +L+ GD+ E L R V + +++ +R + +
Sbjct: 59 ------LVNLK-------GDVTESA--LIRAVQWDVWSKEIIHIDLMRVSASEKVSTTIA 103
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
+ +G + GL +GG L I ++ LCPA +P + V+++ L + + I A ++
Sbjct: 104 VELKG--TAAGLTEGGVLQFITHELEILCPAAEIPEKLIVNVNNLHLGKAIHANEV 157
>gi|170760837|ref|YP_001788437.1| 50S ribosomal protein L25 [Clostridium botulinum A3 str. Loch
Maree]
gi|169407826|gb|ACA56237.1| 50S ribosomal protein L25 [Clostridium botulinum A3 str. Loch
Maree]
Length = 178
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 24/186 (12%)
Query: 67 SVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGRSFFVSRLFDLEVR 124
S K R+ G+VP I++ G++ N + ++ N + VG G + D +V
Sbjct: 14 SNKVRRDGKVPGIIY----GKNLNNLMFEVGEIELNSMISQVGEHGVTDINYEGTDYKV- 68
Query: 125 SEFGSGDLIEKVRVLP-RKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGL 183
LI++V+ P +K +H + NVT L+ ++P++F GD++ +
Sbjct: 69 -------LIKEVQKDPVKKNVIHIDLE---NVT----NSSNLVNAEIPILFSGDELI--M 112
Query: 184 RKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPV 243
+KGG + K +VK CP + +P I +DLS+ D+ + DL++ + + + D +
Sbjct: 113 KKGGVVQKEKDSVKVRCPEEKLPNNIMIDLSQYDIGKTFRISDLELGEDITFMENLDSTI 172
Query: 244 CKIAGG 249
I G
Sbjct: 173 VSIFFG 178
>gi|83588951|ref|YP_428960.1| 50S ribosomal protein L25/general stress protein Ctc [Moorella
thermoacetica ATCC 39073]
gi|109893369|sp|Q2RMC2.1|RL25_MOOTA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|83571865|gb|ABC18417.1| LSU ribosomal protein L25P [Moorella thermoacetica ATCC 39073]
Length = 208
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 52 ETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGR 111
+T+ R G + + + R+ G++P I++ G+ N +I + Q+ ++ G
Sbjct: 4 QTLEVTMRPEVGKQAARRLRRQGKLPGIIY----GKKIANLAVI-IPARQLEHILATEGE 58
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
+ + + G G E V+ R+V H +V F + E L+ VP
Sbjct: 59 NALLKLVVS-------GDGQNKEFTAVI-REVQRHPLKGNLTHVDFYQVSMEDKLRATVP 110
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKVH 230
++ G+ + G+++GG L R ++ PAD+ P I VD+S L V + + G++KV
Sbjct: 111 VILEGE--ARGVKEGGILQHGVREIEIESLPADL-PESIVVDVSHLGVGEHLTVGEIKVP 167
Query: 231 PALKLLRSKDEPVCKIAGGRA 251
+K+L D + + RA
Sbjct: 168 AGVKILSEPDTVIATVVTTRA 188
>gi|255692808|ref|ZP_05416483.1| ribosomal protein L25, Ctc-form [Bacteroides finegoldii DSM 17565]
gi|423299015|ref|ZP_17277040.1| 50S ribosomal protein L25 [Bacteroides finegoldii CL09T03C10]
gi|260621437|gb|EEX44308.1| ribosomal protein L25, Ctc-form [Bacteroides finegoldii DSM 17565]
gi|408474364|gb|EKJ92883.1| 50S ribosomal protein L25 [Bacteroides finegoldii CL09T03C10]
Length = 196
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 24/189 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQ-IRKLVGHLGRSFFVSR 117
R+S R + RK G VP +++ GGN+ + TN+ +R LV + + V
Sbjct: 16 RSSEQARALKEMRKNGGVPCVLY-------GGNEVVHFTVTNEGLRNLV-YTPHIYVVDL 67
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
+ D + KV + + + H D L+V F + + ++VP+ G
Sbjct: 68 VIDGK------------KVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLEG- 114
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
++ G++ GG L R +K +++P + +++S L + + I G+L L+L+
Sbjct: 115 -LAEGVKAGGKLALQMRKIKVKALYNVIPEKLIINVSHLGLGKTIKVGELS-FEGLELIS 172
Query: 238 SKDEPVCKI 246
+K+ VC +
Sbjct: 173 AKEAVVCAV 181
>gi|442803559|ref|YP_007371708.1| 50S ribosomal protein L25 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739409|gb|AGC67098.1| 50S ribosomal protein L25 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 205
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 152 PLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDV 211
P+++ F + +++K+ VP F G + R LN ++ ++ +P +ID+
Sbjct: 83 PIHIDFYASSENSVVKVTVPFKFVGREKLGSNRL--VLNILEDEIEIQGVLKDLPEFIDI 140
Query: 212 DLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA 247
D+SE+ +I GD+K+ +KLL +DE V K+
Sbjct: 141 DVSEMTDGSEITMGDIKLPAGVKLLSKEDEIVAKVV 176
>gi|414083470|ref|YP_006992178.1| 50S ribosomal protein L25 [Carnobacterium maltaromaticum LMA28]
gi|412997054|emb|CCO10863.1| ribosomal protein L25, Ctc-form [Carnobacterium maltaromaticum
LMA28]
Length = 196
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 145 LHSGTDA----PLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN-TIKRTVKFL 199
+ TDA + V F+ + L +++ +V D V G+++GG LN T+ T+
Sbjct: 75 MEEQTDALSGKWIYVDFVSVDMKELTEVEAQIVLINDAV--GVKQGGMLNQTLYSTLVSA 132
Query: 200 CPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
P D +P I+VD+S+L++ Q I GDLK + +L K+E + +
Sbjct: 133 TP-DKLPETIEVDVSKLEIGQSITIGDLKENKDYTILADKEEQIAAV 178
>gi|428780847|ref|YP_007172633.1| 50S ribosomal protein L25 [Dactylococcopsis salina PCC 8305]
gi|428695126|gb|AFZ51276.1| ribosomal protein L25, Ctc-form [Dactylococcopsis salina PCC 8305]
Length = 215
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P+ ++ G G + + + L L + + L ++ V
Sbjct: 22 RREGFIPTALY----GHKGAESMSLVAKAKDVEML---LKNASINNSLVEVAVT------ 68
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
D K + L R+V H +V+F + +++ VP+ G+ + G+R+GG L
Sbjct: 69 DASWKGKALIREVQKHPWRPDIYHVSFFAVAGQDSVEVTVPVNLEGE--AEGVREGGVLE 126
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
I + CP D +P I++D++E+ V + G+L +
Sbjct: 127 QIITELTIQCPPDQIPEVINIDVTEMPVGTTLHIGELNL 165
>gi|53712489|ref|YP_098481.1| 50S ribosomal protein L25 [Bacteroides fragilis YCH46]
gi|60680689|ref|YP_210833.1| 50S ribosomal protein L25 [Bacteroides fragilis NCTC 9343]
gi|265762652|ref|ZP_06091220.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_16]
gi|336408720|ref|ZP_08589210.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_56FAA]
gi|375357535|ref|YP_005110307.1| putative ribosomal L25p family stress protein [Bacteroides fragilis
638R]
gi|383117417|ref|ZP_09938162.1| 50S ribosomal protein L25 [Bacteroides sp. 3_2_5]
gi|423249172|ref|ZP_17230188.1| 50S ribosomal protein L25 [Bacteroides fragilis CL03T00C08]
gi|423256517|ref|ZP_17237445.1| 50S ribosomal protein L25 [Bacteroides fragilis CL03T12C07]
gi|423258509|ref|ZP_17239432.1| 50S ribosomal protein L25 [Bacteroides fragilis CL07T00C01]
gi|423264520|ref|ZP_17243523.1| 50S ribosomal protein L25 [Bacteroides fragilis CL07T12C05]
gi|423268916|ref|ZP_17247888.1| 50S ribosomal protein L25 [Bacteroides fragilis CL05T00C42]
gi|423273523|ref|ZP_17252470.1| 50S ribosomal protein L25 [Bacteroides fragilis CL05T12C13]
gi|423281631|ref|ZP_17260516.1| 50S ribosomal protein L25 [Bacteroides fragilis HMW 615]
gi|68053087|sp|Q64X29.1|RL25_BACFR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|81316243|sp|Q5LG55.1|RL25_BACFN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|52215354|dbj|BAD47947.1| putative 50S ribosomal protein L25 [Bacteroides fragilis YCH46]
gi|60492123|emb|CAH06886.1| putative ribosomal L25p family stress protein [Bacteroides fragilis
NCTC 9343]
gi|251947256|gb|EES87538.1| 50S ribosomal protein L25 [Bacteroides sp. 3_2_5]
gi|263255260|gb|EEZ26606.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_16]
gi|301162216|emb|CBW21761.1| putative ribosomal L25p family stress protein [Bacteroides fragilis
638R]
gi|335935153|gb|EGM97127.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 2_1_56FAA]
gi|387776089|gb|EIK38189.1| 50S ribosomal protein L25 [Bacteroides fragilis CL07T00C01]
gi|392649049|gb|EIY42734.1| 50S ribosomal protein L25 [Bacteroides fragilis CL03T12C07]
gi|392656719|gb|EIY50357.1| 50S ribosomal protein L25 [Bacteroides fragilis CL03T00C08]
gi|392702225|gb|EIY95371.1| 50S ribosomal protein L25 [Bacteroides fragilis CL05T00C42]
gi|392706786|gb|EIY99909.1| 50S ribosomal protein L25 [Bacteroides fragilis CL07T12C05]
gi|392707816|gb|EIZ00931.1| 50S ribosomal protein L25 [Bacteroides fragilis CL05T12C13]
gi|404582672|gb|EKA87363.1| 50S ribosomal protein L25 [Bacteroides fragilis HMW 615]
Length = 196
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 22/188 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R+S R + R G VP +++ E+ H +V +R LV + + V +
Sbjct: 16 RSSEQARALKEIRNNGGVPCVLYGGEEVVH------FTVTNEGLRNLV-YTPHIYVVDLV 68
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
D + KV + + + H D L+V F + + ++VP+ G
Sbjct: 69 IDGK------------KVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLEG-- 114
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
++ G++ GG L R +K +I+P + +++S L + + + G+L + L+LL +
Sbjct: 115 LAEGVKAGGKLALQMRKLKVKALYNIIPEKLTINVSHLGLGKTVKVGELS-YEGLELLNA 173
Query: 239 KDEPVCKI 246
K+ VC +
Sbjct: 174 KEAVVCAV 181
>gi|392529673|ref|ZP_10276810.1| 50S ribosomal protein L25/general stress protein Ctc
[Carnobacterium maltaromaticum ATCC 35586]
Length = 196
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 145 LHSGTDA----PLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN-TIKRTVKFL 199
+ TDA + V F+ + L +++ +V D V G+++GG LN T+ T+
Sbjct: 75 MEEQTDALSGKWIYVDFVSVDMKELTEVEAQIVLINDAV--GVKQGGMLNQTLYSTLVSA 132
Query: 200 CPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
P D +P I+VD+S+L++ Q I GDLK + +L K+E + +
Sbjct: 133 TP-DKLPETIEVDVSKLEIGQSITIGDLKENKDYTILADKEEQIAAV 178
>gi|372223146|ref|ZP_09501567.1| 50S ribosomal protein L25/general stress protein Ctc
[Mesoflavibacter zeaxanthinifaciens S86]
Length = 204
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI R S G + R AG+VP +++ E H S + ++LV
Sbjct: 5 TIKGSQRESVGKAATKALRNAGKVPCVIYGGESPIH------FSAEELSFKELV------ 52
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ + + E G + + + + + H TD+ L++ F + + + +++P+
Sbjct: 53 -YTPNAYTAVIELENG-----QSINAVLQDIQFHPVTDSILHIDFFQLFDDKPVTMNIPV 106
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
G+ SPG+R GG L R + +++P I VD+S+L + KI L+V
Sbjct: 107 RLEGN--SPGVRNGGRLLFRNRKLSVKALPNLLPDEIVVDISKLKIGGKIAVESLRV 161
>gi|359782578|ref|ZP_09285798.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
psychrotolerans L19]
gi|359369398|gb|EHK69969.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
psychrotolerans L19]
Length = 207
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 22/181 (12%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R AG VP++++ GG+K S+ T + L L + + L+V GS
Sbjct: 24 RNAGNVPAVIY-------GGDKAPTSI-TLVAKDLTKMLESEAAYASVITLKVD---GSN 72
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG--Y 188
+ VL + + H ++ FLR L VPL F + S G+++ G
Sbjct: 73 E-----SVLVKALQRHPSKGYVMHADFLRVVAGQKLTAHVPLHFMNQETSVGVKQQGGEI 127
Query: 189 LNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL---RSKDEPVCK 245
L+TI P D+ P +I+VD+++++++Q + DL V ++L+ D PV
Sbjct: 128 LHTINEVEVSCLPKDL-PEFIEVDMAKVELDQIVHLSDLNVPAGVELVSLAHGSDLPVAS 186
Query: 246 I 246
I
Sbjct: 187 I 187
>gi|189499938|ref|YP_001959408.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium
phaeobacteroides BS1]
gi|226736296|sp|B3EPZ5.1|RL25_CHLPB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189495379|gb|ACE03927.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobium
phaeobacteroides BS1]
Length = 209
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 69 KERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
K R G+VP++V+ H G + + I V ++KLV H S + F
Sbjct: 20 KLRDQGKVPAVVY------HKGEETIHICVDERSLKKLV-HSSESHLIDLTFP------- 65
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
D EK R ++V TD ++ F +L++DVP F G+ +PG+ GG
Sbjct: 66 ---DGKEK-RSFLKEVQFDPVTDKIIHADFQFFSAGEVLEMDVPTTFIGEGEAPGVVAGG 121
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 222
+ I ++K +P +I +D+S +++ Q +
Sbjct: 122 NVQVILHSLKVKAVPSNIPQHITIDVSGMELGQTM 156
>gi|408483927|ref|ZP_11190146.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. R81]
Length = 198
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 22/180 (12%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGH 108
D T+ A R G S + R A +P++V+ GGNK +++ +I KL
Sbjct: 3 DFTLNAQARTDLGKGASRRLRHAANIPAVVY-------GGNKPAESVTILAKEIAKL--- 52
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
S + +L V K V+ + + H ++ F+R L
Sbjct: 53 FENEAAYSHVIELNVDGA--------KQNVIVKAMQRHPSKQFIMHADFVRVVAGQKLTA 104
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
VP+ F G++ +P ++KGG ++ + ++ C +P +I+VDLS L+V + DLK
Sbjct: 105 IVPVHFVGEE-AP-VKKGGEISHVLNEIEVTCLPKDLPEFIEVDLSALEVGAIVHLSDLK 162
>gi|344206156|ref|YP_004791297.1| 50S ribosomal protein L25 [Stenotrophomonas maltophilia JV3]
gi|343777518|gb|AEM50071.1| 50S ribosomal protein L25 [Stenotrophomonas maltophilia JV3]
Length = 205
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 22/180 (12%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R AG +P+IV+ GGN +++ + + F+ S + DL + +
Sbjct: 24 RHAGVIPAIVY-------GGNAEPVAISLDHNEIWLAQQNEWFYAS-ILDLNLDGQVQ-- 73
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
+VL R + H +++ F R L VPL F +D SP + +
Sbjct: 74 ------KVLLRDMQRHPYKQLIMHLDFQRVNENEALTASVPLHFINEDTSPAGKAADVVV 127
Query: 191 TIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPALKLLRSKDEPVC 244
T + + V C +P I+VDL EL + ++K+ PAL L + D+ +
Sbjct: 128 THELKEVTITCLPKDLPESIEVDLGELKAGDVVYLSNIKLPKGVEIPALALGKDHDDAIV 187
>gi|296113815|ref|YP_003627753.1| 50S ribosomal protein L25 [Moraxella catarrhalis RH4]
gi|416216089|ref|ZP_11623490.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 7169]
gi|416220560|ref|ZP_11625484.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 103P14B1]
gi|416233982|ref|ZP_11629580.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 12P80B1]
gi|416239551|ref|ZP_11632024.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC1]
gi|416243882|ref|ZP_11634147.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC7]
gi|416245591|ref|ZP_11634574.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC8]
gi|416249283|ref|ZP_11636459.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis CO72]
gi|416256221|ref|ZP_11639588.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis O35E]
gi|421780612|ref|ZP_16217100.1| 50S ribosomal protein L25 [Moraxella catarrhalis RH4]
gi|295921509|gb|ADG61860.1| 50S ribosomal protein L25 [Moraxella catarrhalis BBH18]
gi|326562159|gb|EGE12487.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 7169]
gi|326565659|gb|EGE15822.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 12P80B1]
gi|326566227|gb|EGE16379.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 103P14B1]
gi|326567120|gb|EGE17242.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC1]
gi|326568384|gb|EGE18464.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC7]
gi|326572285|gb|EGE22280.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC8]
gi|326574299|gb|EGE24246.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis O35E]
gi|326576207|gb|EGE26122.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis CO72]
gi|407812300|gb|EKF83086.1| 50S ribosomal protein L25 [Moraxella catarrhalis RH4]
Length = 223
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 23/193 (11%)
Query: 53 TILAIPRASP--GTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLIS--VQTNQIRKLVGH 108
T+ + RA G S + RK VP+I++ GGN ++ V+TN+I K + +
Sbjct: 5 TLNGVARAESQQGKGASRRLRKDNLVPAIIY-------GGNDEAVAICVKTNEIVKALSN 57
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
SFF S + + + ++I ++ L R H PL++ F R +
Sbjct: 58 --ESFFSSVIT---INLDGAEHEVI--IKALQR----HPSKGFPLHIDFQRIVRGQTMNF 106
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
+VP+ +D S G ++GG L + ++ C +P I+VD++ L + I D+
Sbjct: 107 NVPVNIINEDSSVGKKEGGILTILVNDIEVNCLPRNLPEAIEVDVANLAIGDSIHLSDVT 166
Query: 229 VHPALKLLRSKDE 241
+ P L + DE
Sbjct: 167 L-PNEVTLVTHDE 178
>gi|312109199|ref|YP_003987515.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. Y4.1MC1]
gi|336233593|ref|YP_004586209.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
thermoglucosidasius C56-YS93]
gi|423718316|ref|ZP_17692498.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
thermoglucosidans TNO-09.020]
gi|311214300|gb|ADP72904.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. Y4.1MC1]
gi|335360448|gb|AEH46128.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
thermoglucosidasius C56-YS93]
gi|383365252|gb|EID42551.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
thermoglucosidans TNO-09.020]
Length = 210
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 25/179 (13%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVS-RLFDLEVRSEFGS 129
R G +P I++ G++ NK +I V + +K + GR ++ +L D
Sbjct: 22 RLQGNIPGILY----GKNVENK-MIFVNGSDFQKTIREAGRHSLITLKLND--------- 67
Query: 130 GDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYL 189
E+ VL R V S L+V F + IDV + F G+ + G++ GG L
Sbjct: 68 ----EEYSVLLRDVQRDSLRGNILHVDFQAVDMSTEVDIDVDIRFIGE--AAGVKDGGVL 121
Query: 190 --NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
N + +++ L PA+I PP ID+D+S L + I GD+K ++ E + I
Sbjct: 122 QQNLHQLSIRVL-PANI-PPSIDIDISHLQIGDTITVGDVKTDGKYEINHEPSEVIATI 178
>gi|387792172|ref|YP_006257237.1| 50S ribosomal protein L25 [Solitalea canadensis DSM 3403]
gi|379655005|gb|AFD08061.1| ribosomal protein L25, Ctc-form [Solitalea canadensis DSM 3403]
Length = 198
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 141 RKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFL- 199
+ H TD ++V FL + + +++P+ G SPG+R GG LN R +K
Sbjct: 74 KDAQFHPLTDVVVHVDFLELFDDKEVVMELPIRLEG--TSPGVRIGGKLNQKYRKLKVKG 131
Query: 200 CPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRASDQ 254
P + V Y+ VD+S+L++ + I G++K+ L++L +K + + + RA+ Q
Sbjct: 132 LPKNFV-DYVPVDISKLELGKNIRVGEIKLE-NLEILNAKVDTMVSVLASRATRQ 184
>gi|254525296|ref|ZP_05137351.1| ribosomal protein L25, Ctc-form [Stenotrophomonas sp. SKA14]
gi|219722887|gb|EED41412.1| ribosomal protein L25, Ctc-form [Stenotrophomonas sp. SKA14]
Length = 205
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 22/186 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R AG +P+IV+ GGN +++ + + F+ S + DL + +
Sbjct: 24 RHAGVIPAIVY-------GGNAEPVAISLDHNEIWLAQQNEWFYAS-ILDLNLDGQVQ-- 73
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
+VL R + H +++ F R L VPL F +D SP + +
Sbjct: 74 ------KVLLRDMQRHPYKQLIMHLDFQRVNENEALTASVPLHFINEDTSPAGKAADVVV 127
Query: 191 TIK-RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-----HPALKLLRSKDEPVC 244
T + + V C +P I+VDL++L + ++K+ PAL L + D+ +
Sbjct: 128 THELKEVTISCLPKDLPESIEVDLADLAAGDVVYLSNIKLPKGVEIPALALGKDHDDAIV 187
Query: 245 KIAGGR 250
G+
Sbjct: 188 TAKHGK 193
>gi|331005803|ref|ZP_08329161.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC1989]
gi|330420384|gb|EGG94692.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC1989]
Length = 213
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R++ VP I++ GG+K+ + Q + L+ HL F S + +EV + +
Sbjct: 26 RESSMVPGIIY-------GGSKKPQMISLLQ-KDLIKHLENEAFYSHIISVEV--DGAAQ 75
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLR-KGGYL 189
D+I K + H ++ LR VPL F ++ S G++ +GG +
Sbjct: 76 DVILK------DLQRHPAKPLIYHLDLLRVSKTKKFTTRVPLHFINEETSKGVKVQGGMI 129
Query: 190 NTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
+ ++ C PAD+ P YI+VDL+++++ Q + DL
Sbjct: 130 SHSVTELEISCLPADL-PEYIEVDLADVEIGQTVHISDL 167
>gi|399117243|emb|CCG20057.1| 50S ribosomal protein L25 [Taylorella asinigenitalis 14/45]
Length = 212
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 17/174 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ G+ S + R+ GR+P IV+ GG +++ + ++ L + F
Sbjct: 5 AKARSVQGSSASRRLRREGRLPGIVY-------GGKGEPLNIDLDH-NEIFHALRKQEFH 56
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S L ++++ + + VL R V H L++ FLR + +PL F
Sbjct: 57 SSLLEMDLDGKTET--------VLLRAVQWHPYKPQVLHIDFLRIERGQPITTKIPLHFI 108
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
D+ SP ++ G ++ I ++ C +P I VDL EL+ + I +K
Sbjct: 109 NDENSPAVKLHGNLISKIVTEIEVTCLPKDLPSEIVVDLGELEADSVIHLSSIK 162
>gi|348589678|ref|YP_004874140.1| 50S ribosomal protein L25p [Taylorella asinigenitalis MCE3]
gi|347973582|gb|AEP36117.1| LSU ribosomal protein L25p [Taylorella asinigenitalis MCE3]
Length = 212
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 17/174 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R+ G+ S + R+ GR+P IV+ GG +++ + ++ L + F
Sbjct: 5 AKARSVQGSSASRRLRREGRLPGIVY-------GGKGEPLNIDLDH-NEIFHALRKQEFH 56
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S L ++++ + + VL R V H L++ FLR + +PL F
Sbjct: 57 SSLLEMDLDGKTET--------VLLRAVQWHPYKPQVLHIDFLRIERGQPITTKIPLHFI 108
Query: 176 GDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
D+ SP ++ G ++ I ++ C +P I VDL EL+ + I +K
Sbjct: 109 NDENSPAVKLHGNLISKIVTEIEVTCLPKDLPSEIVVDLGELEADSVIHLSSIK 162
>gi|429739422|ref|ZP_19273178.1| ribosomal protein L25, Ctc-form [Prevotella saccharolytica F0055]
gi|429156997|gb|EKX99608.1| ribosomal protein L25, Ctc-form [Prevotella saccharolytica F0055]
Length = 201
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 89/193 (46%), Gaps = 17/193 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSR 117
R+ G + S + RK G +P ++ + +G + + V ++RK+V +
Sbjct: 11 RSDLGKKASKEMRKEGMIPCNLYGEAKNANGQPEAVAFMVPMAELRKVV-------YTPH 63
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
++ + + + +K + +++ H TDA L+V F + + I +P+ G
Sbjct: 64 IYVINLDIDG------KKHTAIMKELQFHPVTDALLHVDFFEINEKKDISIGIPVNLVGH 117
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
+ G+R GG ++ R + P +P +D+D++ + + + I AG+L L+++
Sbjct: 118 --AQGVRDGGRMSLSIRKLVVKAPYKQIPEKLDIDVTAMTIGKSIKAGELNF-DGLEIIT 174
Query: 238 SKDEPVCKIAGGR 250
KD +C I R
Sbjct: 175 PKDVVICSIKMTR 187
>gi|374815153|ref|ZP_09718890.1| 50S ribosomal protein L25, Ctc-form [Treponema primitia ZAS-1]
Length = 214
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 25/189 (13%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLG--RSFFVS 116
R G+ + + R+AGR+P++V+ G + +S+ + + + G S V+
Sbjct: 11 RTEAGSGGARRIRQAGRIPAVVY-------GRTGKALSIDLDALEFVNSAKGISESTIVT 63
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAP-LNVTFLRAPPEALLKIDVPLVFR 175
D + F V+ R + TD L+V F L+ V +
Sbjct: 64 INVDGQTHQAF--------VKDTQRNI-----TDGKILHVDFYEVEAGISLRAKVSVHVH 110
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G+ V G+R+GG L + ++ C +P IDVD++EL V Q I DLK+ ++L
Sbjct: 111 GNPV--GVREGGILESPLHEIEVECLPKDLPERIDVDIAELKVNQSIHVRDLKLGDGVRL 168
Query: 236 LRSKDEPVC 244
+ + D+ V
Sbjct: 169 ISNADQVVA 177
>gi|119944671|ref|YP_942351.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Psychromonas
ingrahamii 37]
gi|226736354|sp|A1STD7.1|RL25_PSYIN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|119863275|gb|ABM02752.1| LSU ribosomal protein L25P [Psychromonas ingrahamii 37]
Length = 203
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R G S + R A VP+IV+ G +K +S+ + ++ G F
Sbjct: 7 ATTRTDLGKGASRRLRHADLVPAIVY-------GADKEAVSLTFTH-KDIIKAEGIEAFY 58
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
S + DLE+ D + + +V+ + + H+ ++ LR + L VPL F
Sbjct: 59 SSVLDLEI-------DGVSE-QVVLKDLQRHAFKARIQHLDLLRVDAKHKLHTTVPLHFI 110
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDV 218
+ +S ++ GG + V+ LC +P +I+VD+S +++
Sbjct: 111 NEGLSEAIKNGGIVYRTINEVEVLCLPKDLPSFIEVDISTMEI 153
>gi|167835375|ref|ZP_02462258.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
thailandensis MSMB43]
gi|424902098|ref|ZP_18325614.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
thailandensis MSMB43]
gi|390932473|gb|EIP89873.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
thailandensis MSMB43]
Length = 167
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
L + F S + DLEV + RVL R V H L+V F R P+ L
Sbjct: 13 LKKEAFHSSILDLEVAGK--------SQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHT 64
Query: 169 DVPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGD 226
VPL F + SP ++ ++ + ++ C PAD+ P +++VDLS+++ Q + D
Sbjct: 65 KVPLHFLNAETSPAVKLSSAVVSHVVTEIEIECLPADL-PEFLEVDLSKIEAGQSLHVKD 123
Query: 227 L 227
+
Sbjct: 124 I 124
>gi|150006312|ref|YP_001301056.1| 50S ribosomal protein L25 [Bacteroides vulgatus ATCC 8482]
gi|294776297|ref|ZP_06741781.1| ribosomal protein L25, Ctc-form [Bacteroides vulgatus PC510]
gi|319641348|ref|ZP_07996043.1| 50S ribosomal protein L25 [Bacteroides sp. 3_1_40A]
gi|345521337|ref|ZP_08800666.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 4_3_47FAA]
gi|423314517|ref|ZP_17292451.1| 50S ribosomal protein L25 [Bacteroides vulgatus CL09T03C04]
gi|166223663|sp|A6L6X0.1|RL25_BACV8 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|149934736|gb|ABR41434.1| putative 50S ribosomal protein L25 [Bacteroides vulgatus ATCC 8482]
gi|254837954|gb|EET18263.1| 50S ribosomal protein L25, Ctc-form [Bacteroides sp. 4_3_47FAA]
gi|294449884|gb|EFG18400.1| ribosomal protein L25, Ctc-form [Bacteroides vulgatus PC510]
gi|317387029|gb|EFV67913.1| 50S ribosomal protein L25 [Bacteroides sp. 3_1_40A]
gi|392682332|gb|EIY75678.1| 50S ribosomal protein L25 [Bacteroides vulgatus CL09T03C04]
Length = 198
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 88/191 (46%), Gaps = 21/191 (10%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHG-GNKRLISVQTNQIRKLVGHLGRSFFVSR 117
R G + + + RK VP +++ + ++G SV T +R LV +
Sbjct: 11 RTDVGKKATHELRKNNGVPCVLYGVQKDENGLPVATHFSVPTEGLRNLV-------YTPH 63
Query: 118 LF--DLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFR 175
++ DL + + V + + + H TDA L+V F + + ++VP+
Sbjct: 64 IYVVDLNIDGKI--------VNAILKDIQFHPVTDAILHVDFYQIDEAKPIVMEVPVQLE 115
Query: 176 GDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
G ++ G+R GG L R +K +++P + VD++ L + + + G+L + L+L
Sbjct: 116 G--LAEGVRAGGKLALQLRKLKVKALYNVIPERLVVDVTSLGLGKTVKVGELS-YEGLEL 172
Query: 236 LRSKDEPVCKI 246
+ +K+ VC +
Sbjct: 173 INAKEAVVCAV 183
>gi|386288630|ref|ZP_10065770.1| 50S ribosomal protein L25/general stress protein Ctc [gamma
proteobacterium BDW918]
gi|385278185|gb|EIF42157.1| 50S ribosomal protein L25/general stress protein Ctc [gamma
proteobacterium BDW918]
Length = 210
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 27/215 (12%)
Query: 51 DETILAIPRASPGTRVSVKERK-AGRVPSIVFEQEDGQHGGNKRLISVQTNQIRK-LVGH 108
D T+ A RA G S + R+ G +P+IV+ GG K N I K L+
Sbjct: 4 DYTVSATVRADVGKGASRRLRRLEGEIPAIVY-------GGEKA--PQMLNLIHKDLIRL 54
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
L F + + L+V + K V+ + + H L+ FLR + + +
Sbjct: 55 LNDEAFYTSILTLDVDGQ--------KESVVLKDLQRHPAKLRVLHADFLRVNADTPITL 106
Query: 169 DVPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
VPL F +D+ G++ +GG + ++ C +P +I+VD+++++ + DL
Sbjct: 107 HVPLHFLNEDICVGVKLQGGNITHAATDIEVQCLPKDLPEFIEVDMAKIETGTTLHISDL 166
Query: 228 KV-----HPALKLLRSKDEPVCKIAG--GRASDQK 255
+ AL L D+ + + G +SD +
Sbjct: 167 VLPAGVSSTALALGEDHDQAIATVHAPRGASSDDE 201
>gi|375111020|ref|ZP_09757232.1| 50S ribosomal protein L25/general stress protein Ctc [Alishewanella
jeotgali KCTC 22429]
gi|374568850|gb|EHR40021.1| 50S ribosomal protein L25/general stress protein Ctc [Alishewanella
jeotgali KCTC 22429]
Length = 200
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 25/208 (12%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G S + R A +VP+I++ GG+K +S+ + + L +
Sbjct: 7 TLNAEVRNDLGKGASRRLRHADQVPAIIY-------GGHKPALSITLDHAKLLKAQSFEA 59
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F+ S + + V E +V+ + + + H L+V F R L VP+
Sbjct: 60 FY-SHILTISVGGE--------EVKAIVKAMQRHPFKPKILHVDFQRVEAGHELHTTVPV 110
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F +D + +KGG + V+ C +P +I+VDL+++ V + D+K
Sbjct: 111 HFLNEDAAA--KKGGVVVHGLNEVEITCLPQDLPEFIEVDLADVAVGVTLHLSDIKAPKG 168
Query: 233 LKLLR-----SKDEPVCKIA--GGRASD 253
+K ++ D PV + G+A D
Sbjct: 169 VKFVQLTKGEGHDLPVVSVNKPAGKAED 196
>gi|167561485|ref|ZP_02354401.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
oklahomensis EO147]
gi|167568715|ref|ZP_02361589.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
oklahomensis C6786]
Length = 167
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
L + F S + DLEV + +VL R V H L+V F R + L
Sbjct: 13 LKKEAFHSSILDLEVAGQ--------SQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHT 64
Query: 169 DVPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
VPL F +VSP ++ ++ + ++ C +P +++VDLS+++ Q + A D+
Sbjct: 65 KVPLHFLNAEVSPAVKLSSAVVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSLHAKDI 124
>gi|325286677|ref|YP_004262467.1| 50S ribosomal protein L25 [Cellulophaga lytica DSM 7489]
gi|324322131|gb|ADY29596.1| 50S ribosomal protein L25 [Cellulophaga lytica DSM 7489]
Length = 203
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 25/200 (12%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI R S G + + R AG VP +V+ E H L + LV
Sbjct: 5 TITGSKRESVGKKATKALRNAGMVPCVVYGGEQPLHFSAPEL------AFKDLV------ 52
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ + + E G EKV + + + H +D +++ F + + + +D+P+
Sbjct: 53 -YTPNAHTVVIDLENG-----EKVNAVIQDIQFHPVSDRIIHIDFYQLFDDKAVTMDIPV 106
Query: 173 VFRGDDVSPGLRKGGYLNTIKR--TVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVH 230
G+ SPG+R GG L KR T+K L PA + P + DVD+++L + I L V+
Sbjct: 107 RLVGN--SPGVRNGGRLLFRKRKLTIKAL-PAKL-PDFFDVDINKLKIGGNIAVSSL-VN 161
Query: 231 PALKLLRSKDEPVCKIAGGR 250
+L + V ++ R
Sbjct: 162 DDFTILHPDNTVVVQVKSSR 181
>gi|423279685|ref|ZP_17258598.1| 50S ribosomal protein L25 [Bacteroides fragilis HMW 610]
gi|404584673|gb|EKA89317.1| 50S ribosomal protein L25 [Bacteroides fragilis HMW 610]
Length = 196
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 131 DLI---EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
DLI +KV + + + H D L+V F + + ++VP+ G ++ G++ GG
Sbjct: 66 DLIIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLEG--LAEGVKAGG 123
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
L R +K +++P + V++S L + + + G+L + L+LL +KD VC +
Sbjct: 124 KLALQMRKLKVKALYNVIPEKLTVNVSHLGLGKTVKVGELS-YEGLELLNAKDAVVCAV 181
>gi|409991823|ref|ZP_11275052.1| 50S ribosomal protein L25/general stress protein Ctc [Arthrospira
platensis str. Paraca]
gi|291572085|dbj|BAI94357.1| 50S ribosomal protein L25 [Arthrospira platensis NIES-39]
gi|409937317|gb|EKN78752.1| 50S ribosomal protein L25/general stress protein Ctc [Arthrospira
platensis str. Paraca]
Length = 201
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 83/187 (44%), Gaps = 19/187 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P++++ G G +++ L + + L L +
Sbjct: 20 RREGLIPAVLY----GHKGAESEELTIDAKTAENL---MKKGAVNHTLIQLNIP------ 66
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK-GGYL 189
DL + L R+V H P +++F +++ +PL F G+ + G++ GG L
Sbjct: 67 DLSWAGKALLREVQTHPWKGFPYHLSFFSIGTLESVEVTIPLNFIGEPM--GVKNSGGML 124
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI--- 246
+ + V+ C +P IDV++S L+V + +LK+ ++++ D+ V I
Sbjct: 125 DLVITEVQVNCKPGNIPEAIDVEVSALEVGDALHIHELKLPEGVEVIAEADQVVASILYR 184
Query: 247 AGGRASD 253
GG+A +
Sbjct: 185 GGGQAEN 191
>gi|91204543|emb|CAJ70771.1| similar to 50S ribosomal protein L25 (TL5) [Candidatus Kuenenia
stuttgartiensis]
Length = 212
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 21/183 (11%)
Query: 64 TRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEV 123
T+ K R G +P++V+ H + L+SV + +++ R +S +D
Sbjct: 16 TKAVRKLRATGHIPAVVY-----GHKEDNVLLSVDGGEFGRVLNAGAR--MISLAYDRTK 68
Query: 124 RSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGL 183
S VL + V + +D L+V F R + + + VP++ G V G+
Sbjct: 69 ES------------VLIKDVQYDNLSDKVLHVDFARVSMDERVTLKVPIILSGSAV--GV 114
Query: 184 RKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPV 243
+ GG L + ++ C VP I V++SEL++ + I +L +K L + V
Sbjct: 115 KAGGVLTQTMKNIEIECFPAAVPEDIKVNVSELEMGKSIHVKELPSIAGIKYLSDAESVV 174
Query: 244 CKI 246
+
Sbjct: 175 VSV 177
>gi|56961862|ref|YP_173584.1| 50S ribosomal protein L25 [Bacillus clausii KSM-K16]
gi|68053067|sp|Q5WAD7.1|RL25_BACSK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|56908096|dbj|BAD62623.1| ribosomal protein L25 family general stress protein [Bacillus
clausii KSM-K16]
Length = 218
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 11/125 (8%)
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
LFDL++ + ++++V++ P + ++V F ++VP+ GD
Sbjct: 59 LFDLQLENGGKHHVMVQEVQIDPL-------NNQYMHVDFFEVDMNEERDVNVPVHLEGD 111
Query: 178 DVSPGLRKGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
+PG ++GG +N + + C PADI P I VD+S L++ + D++ + + ++
Sbjct: 112 --APGAKEGGIVNHLLYEITVHCLPADI-PESITVDISNLNIGDSLSVSDIRANVPVTIV 168
Query: 237 RSKDE 241
DE
Sbjct: 169 NEDDE 173
>gi|393781026|ref|ZP_10369227.1| 50S ribosomal protein L25 [Bacteroides salyersiae CL02T12C01]
gi|392677361|gb|EIY70778.1| 50S ribosomal protein L25 [Bacteroides salyersiae CL02T12C01]
Length = 196
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+KV + + + H D L+V F + + ++VP+ G ++ G++ GG L
Sbjct: 72 KKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLEG--LAEGVKAGGKLVLQM 129
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
R +K +I+P + V++S L + + + G+L + L+LL +KD VC +
Sbjct: 130 RKLKVKALYNIIPEKLTVNVSHLGLGKTVKVGELN-YEGLELLNAKDAVVCAV 181
>gi|319953434|ref|YP_004164701.1| 50S ribosomal protein L25 [Cellulophaga algicola DSM 14237]
gi|319422094|gb|ADV49203.1| LSU ribosomal protein L25P [Cellulophaga algicola DSM 14237]
Length = 207
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 25/202 (12%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI R S G + + R AG+VP +++ E H S + LV
Sbjct: 5 TISGSKRESVGKKATKALRNAGKVPCVLYGGETPLH------FSADEPAFKTLV------ 52
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ + E G +K + + + H TDA L++ F + + + +D+P+
Sbjct: 53 -YTPNAHTAVIEIEGG-----DKFDAVLQDIQFHPVTDAILHIDFYQLFADKEVTMDIPV 106
Query: 173 VFRGDDVSPGLRKGGYLNTIKR--TVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVH 230
+G+ SPG+ GG L KR T+K L PA + P + D+D+S+L + I L +
Sbjct: 107 QLKGN--SPGVMNGGRLLFRKRKLTIKAL-PAKL-PDFFDIDISKLKIGNNITVETL-LK 161
Query: 231 PALKLLRSKDEPVCKIAGGRAS 252
+L ++ V ++ R +
Sbjct: 162 DEFTILHPENTVVVQVKSARNA 183
>gi|126665169|ref|ZP_01736152.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter
sp. ELB17]
gi|126630539|gb|EBA01154.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter
sp. ELB17]
Length = 211
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 27/205 (13%)
Query: 51 DETILAIPRASPGTRVSVKERKAGR-VPSIVFEQEDGQHGGNKRL--ISVQTNQIRKLVG 107
D I A PR G S + R+ R +P+I++ GG+K IS+ N+++K
Sbjct: 4 DFVIEAFPRDDQGRGASRRLRRQERKIPAIIY-------GGHKDATPISIWHNELKKA-- 54
Query: 108 HLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLK 167
L F SR+ +E+ E K V+ + + H + F R + +
Sbjct: 55 -LENEAFYSRVLTIELNGE--------KESVILKDLQRHPYKPLLSHADFQRINKDEEIF 105
Query: 168 IDVPLVFRGDDVSPGLRK-GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGD 226
+ VPL ++ +P ++ GG + V+ C +P +I++DL +++++ + D
Sbjct: 106 VHVPLHLVNEETAPAIKTFGGVAFRLMTQVEVACLPQNLPEFIEIDLFDVEMDGIVHMSD 165
Query: 227 LKVH-----PALKLLRSKDEPVCKI 246
LK+ PAL+ D+ + I
Sbjct: 166 LKLPEGVRIPALQHGAEHDQAIVTI 190
>gi|119477473|ref|ZP_01617664.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma
proteobacterium HTCC2143]
gi|119449399|gb|EAW30638.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma
proteobacterium HTCC2143]
Length = 216
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 95 ISVQTNQIRKLVGHLGRSFFVSRL-FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPL 153
++ N+I KL + +FF S + +L+ +SE +V+ + + H + +
Sbjct: 44 VTFAMNEIVKLAEN--EAFFTSLVDLNLDGKSE----------QVVIKDMQRHPARETIM 91
Query: 154 NVTFLRAPPEALLKIDVPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVD 212
+V FLR + + + VP F +D G++ +GG ++ ++ C +P YI+VD
Sbjct: 92 HVDFLRVSAKTKITMQVPFHFTNEDTCHGVKIEGGSVSHALNDIEITCLPKDLPEYIEVD 151
Query: 213 LSELDVEQKILAGDL 227
++ L V + DL
Sbjct: 152 MAALKVGDNVHLSDL 166
>gi|402830700|ref|ZP_10879396.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. CM59]
gi|402283900|gb|EJU32407.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. CM59]
Length = 198
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 84/198 (42%), Gaps = 22/198 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI+ R S G S R AG+VP +++ E+ H S + +KLV
Sbjct: 5 TIVGSQRESVGKAASKALRNAGKVPCVLYGGENTIH------FSADSLAFKKLV------ 52
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ ++ + E G + + + + TD L+V F + + + ++VP+
Sbjct: 53 -YTPNVYTATI--ELGG----KTYTAILQDIQFDPVTDKILHVDFYQLHKDKEITLEVPI 105
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
G +PG+ GG L + R +K D +P ++ VD+S +++ + +
Sbjct: 106 QIVG--TAPGVMAGGTLRIVNRKLKVKALPDNLPDFVPVDISWMEMGNRFYVTKI-AQEN 162
Query: 233 LKLLRSKDEPVCKIAGGR 250
K++ + VC++ R
Sbjct: 163 YKIMHPDNTVVCQVRVSR 180
>gi|307151053|ref|YP_003886437.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Cyanothece
sp. PCC 7822]
gi|306981281|gb|ADN13162.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cyanothece
sp. PCC 7822]
Length = 191
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P+ ++ G G ++V+ + L L ++ + L D+ + SG
Sbjct: 20 RRQGLIPAALY----GHKGTESISLTVKEKDAQVL---LKKASVNNTLVDVNIPDVPWSG 72
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
+ L R+V +H + +++F +++ VPL G+ + G+++GG +
Sbjct: 73 ------KALIREVQIHPWKRSVYHLSFFSVAAHGKIEVVVPLHLVGE--AAGVKQGGLIE 124
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+ ++ C + +P ID+DL L + + GDLK+
Sbjct: 125 QVISSIAVDCLPESIPEAIDIDLGPLGIGDSVSIGDLKL 163
>gi|416156555|ref|ZP_11604594.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 101P30B1]
gi|416228010|ref|ZP_11627362.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 46P47B1]
gi|326564476|gb|EGE14702.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 46P47B1]
gi|326574883|gb|EGE24813.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 101P30B1]
Length = 223
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 23/193 (11%)
Query: 53 TILAIPRASP--GTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLIS--VQTNQIRKLVGH 108
T+ + RA G S + RK VP+I++ GGN ++ V+TN++ K + +
Sbjct: 5 TLNGVARAESQQGKGASRRLRKDNLVPAIIY-------GGNDEAVAICVKTNEVVKALSN 57
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
SFF S + + + ++I ++ L R H PL++ F R +
Sbjct: 58 --ESFFSSVIT---INLDGAEHEVI--IKALQR----HPSKGFPLHIDFQRIVRGQTMNF 106
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
+VP+ +D S G ++GG L + ++ C +P I+VD++ L + I D+
Sbjct: 107 NVPVNIINEDSSVGKKEGGILTILVNDIEVNCLPRNLPEAIEVDVANLAIGDSIHLSDVT 166
Query: 229 VHPALKLLRSKDE 241
+ P L + DE
Sbjct: 167 L-PNEVTLVTHDE 178
>gi|402548569|ref|ZP_10845422.1| 50S ribosomal protein L25/general stress protein Ctc [SAR86 cluster
bacterium SAR86C]
Length = 165
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 74 GRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLI 133
G +P+I++ E I ++ N++ K F+ L +GDL
Sbjct: 28 GMIPAIIYGDEKDSLN-----IKLKLNELTK--ASQNELFYTQVLI-------IKNGDLE 73
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLR-KGGYLNTI 192
EKV + +++ L+ FLR + LK+ +P+ F ++ G++ + G LN
Sbjct: 74 EKV--VLKELQKDPAKGKFLHADFLRVSRKTKLKVIIPINFLNEEECAGVKNECGVLNKT 131
Query: 193 KRTVKFLCPADIVPPYIDVDLSELDV 218
R V+ +C A +P ID+D++ LD+
Sbjct: 132 IREVEVMCLAGNIPESIDIDVTALDL 157
>gi|281412600|ref|YP_003346679.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga
naphthophila RKU-10]
gi|281373703|gb|ADA67265.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga
naphthophila RKU-10]
Length = 215
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 13/188 (6%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G R + + R++G VP++V+ G I V+ R ++ + + +
Sbjct: 9 REVKGKREARRLRRSGEVPAVVY-------GPATEPIPVKIK--RSVLEKIFHTISEATP 59
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
L ++ + G+ + + V + V ++ +++ F ++I+VPL G
Sbjct: 60 IQLIIKDD--QGNTVAEKTVFLKMVQRDKVSETVVHLDFYEPTKGHRMRINVPLKVVGKP 117
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
V G+ KGG+L + D VP I+VD+S LD+ I A DLK+ +K L
Sbjct: 118 V--GVEKGGFLEVFHEEIPVETDPDKVPQEIEVDVSSLDLGDVIHARDLKLPEGVKCLLE 175
Query: 239 KDEPVCKI 246
++E V +
Sbjct: 176 EEEAVVSV 183
>gi|170289080|ref|YP_001739318.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga
sp. RQ2]
gi|226736373|sp|B1LBD7.1|RL25_THESQ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|170176583|gb|ACB09635.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga
sp. RQ2]
Length = 215
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 13/188 (6%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G R + + R++G VP++V+ G I V+ R ++ + + +
Sbjct: 9 REVKGKREARRLRRSGEVPAVVY-------GPATEPIPVKIK--RSVLEKIFHTISEATP 59
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
L ++ + G+ + + V + V ++ +++ F ++I+VPL G
Sbjct: 60 IQLIIKDD--QGNTVAEKTVFLKMVQRDKVSETVVHLDFYEPTKGHRMRINVPLKVVGKP 117
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
V G+ KGG+L + D VP I+VD+S LD+ I A DLK+ +K L
Sbjct: 118 V--GVEKGGFLEVFHEEIPVETDPDKVPQEIEVDVSSLDLGDVIHARDLKLPEGVKCLLE 175
Query: 239 KDEPVCKI 246
++E V +
Sbjct: 176 EEEAVVSV 183
>gi|402817159|ref|ZP_10866748.1| 50S ribosomal protein L25 [Paenibacillus alvei DSM 29]
gi|402505265|gb|EJW15791.1| 50S ribosomal protein L25 [Paenibacillus alvei DSM 29]
Length = 206
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 55 LAIPRASPGTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
L R + TR S++E R+ GR+P +V+ + + V + + KL +GR+
Sbjct: 10 LKAERRTDFTRSSLRELRQKGRIPGVVYGADM-----ESTALHVDSREFAKL-ARVGRT- 62
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
+F L++ ++ V+ L + V G A ++ F + ++I VP+
Sbjct: 63 ---EVFQLQIEG-------MKPVQALIKDVV--KGDGAYAHIDFQQVSANHPIRIHVPIE 110
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
+ G V G++KGG L T + ++ +P I VD+S L + K+L D++V +
Sbjct: 111 YVGTPV--GVKKGGILQTQETNLEIEGLPAHLPSVIQVDISTLRIGGKLLVEDVQVPEHI 168
Query: 234 KLLRSKDEPVCKIAGGRA 251
L+ K+E + I R
Sbjct: 169 HLISHKNELLVSIVTQRG 186
>gi|397169689|ref|ZP_10493120.1| 50S ribosomal protein L25/general stress protein Ctc [Alishewanella
aestuarii B11]
gi|396088677|gb|EJI86256.1| 50S ribosomal protein L25/general stress protein Ctc [Alishewanella
aestuarii B11]
Length = 200
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 25/208 (12%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G S + R A +VP+I++ GG+K +S+ + + L +
Sbjct: 7 TLNAEVRNDLGKGASRRLRHADQVPAIIY-------GGHKPALSITLDHSKLLKAQSFEA 59
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F+ S + + V E +V+ + + + H L+V F R L VP+
Sbjct: 60 FY-SHILTISVGGE--------EVKAIVKAMQRHPFKPKILHVDFQRVEAGHELHTTVPV 110
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F +D + +KGG + V+ C +P +I+VDL+++ V + D+K
Sbjct: 111 HFLNEDAAA--KKGGVVVHGLNEVEITCLPQDLPEFIEVDLADVAVGVTLHLSDIKAPKG 168
Query: 233 LKLLR-----SKDEPVCKIA--GGRASD 253
+K ++ D PV + G+A D
Sbjct: 169 VKFVQLTKGEGHDLPVVSVNKPAGKAED 196
>gi|88810857|ref|ZP_01126114.1| Ribosomal protein L25 [Nitrococcus mobilis Nb-231]
gi|88792487|gb|EAR23597.1| Ribosomal protein L25 [Nitrococcus mobilis Nb-231]
Length = 233
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFV 115
A R G S + R+A ++P+I++ G K I++ ++ +++G + F
Sbjct: 9 AAVRTDQGKSASRRLRRAKKLPAILY-------GAKKDAIALALDE-EQVMGLMRDETFF 60
Query: 116 SRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFL---RAPPEALLKIDVPL 172
S++ D+ + GD E R + + + H PL V + R L+ VPL
Sbjct: 61 SQIIDVNI------GDTTE--RAILKDLQRHPVK--PLVVLHMDLQRVTAGQKLRQRVPL 110
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F ++ + G+++GG L+ V+ C +P YI+VD++ L +++ DLK+
Sbjct: 111 HFINEEKAVGVKQGGTLHHDLLDVEIECLPRHLPAYIEVDIATLGLDEAYHLSDLKLPKG 170
Query: 233 LKLLRSKDEP 242
+ L D+P
Sbjct: 171 VVLTALGDDP 180
>gi|358053209|ref|ZP_09146981.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus simiae CCM 7213]
gi|357257305|gb|EHJ07590.1| 50S ribosomal protein L25/general stress protein Ctc
[Staphylococcus simiae CCM 7213]
Length = 218
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 89/195 (45%), Gaps = 24/195 (12%)
Query: 56 AIPRASPGTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIR--KLVGHLGRS 112
+I R TR +K+ RK+G+VP++++ G + +SV+ +++ K++ +GR+
Sbjct: 6 SIIRQGKQTRSDLKQLRKSGKVPAVMY-------GYGTKNVSVKVDEVEFIKVIREVGRN 58
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ E G G + ++V+ + ++ FL ++VP+
Sbjct: 59 GVI----------ELGVGS--KSIKVMVSDYQYDPLKNQITHIDFLAINMSEERTVEVPV 106
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
G+ V G ++GG ++ ++ D +P I+VD++EL+V + D+K
Sbjct: 107 QLVGEAV--GAKEGGVVDQPLFNLEVTATPDNIPEAIEVDITELNVNDVLTVADVKTTGD 164
Query: 233 LKLLRSKDEPVCKIA 247
+ +EPV +
Sbjct: 165 FTIENDPEEPVVSVV 179
>gi|160887365|ref|ZP_02068368.1| hypothetical protein BACOVA_05384 [Bacteroides ovatus ATCC 8483]
gi|237722654|ref|ZP_04553135.1| 50S ribosomal protein L25 [Bacteroides sp. 2_2_4]
gi|299148941|ref|ZP_07042003.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_23]
gi|336415791|ref|ZP_08596129.1| 50S ribosomal protein L25 [Bacteroides ovatus 3_8_47FAA]
gi|423288303|ref|ZP_17267154.1| 50S ribosomal protein L25 [Bacteroides ovatus CL02T12C04]
gi|423295441|ref|ZP_17273568.1| 50S ribosomal protein L25 [Bacteroides ovatus CL03T12C18]
gi|156107776|gb|EDO09521.1| ribosomal protein L25, Ctc-form [Bacteroides ovatus ATCC 8483]
gi|229448464|gb|EEO54255.1| 50S ribosomal protein L25 [Bacteroides sp. 2_2_4]
gi|298513702|gb|EFI37589.1| ribosomal protein L25, Ctc-form [Bacteroides sp. 3_1_23]
gi|335939694|gb|EGN01566.1| 50S ribosomal protein L25 [Bacteroides ovatus 3_8_47FAA]
gi|392671192|gb|EIY64668.1| 50S ribosomal protein L25 [Bacteroides ovatus CL02T12C04]
gi|392673169|gb|EIY66633.1| 50S ribosomal protein L25 [Bacteroides ovatus CL03T12C18]
Length = 196
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 24/189 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQ-IRKLVGHLGRSFFVSR 117
R+S R + RK G VP +++ GGN+ + TN+ +R LV + + V
Sbjct: 16 RSSEQARALKEIRKNGGVPCVLY-------GGNEVVHFTVTNEGLRNLV-YTPHIYVVDL 67
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
+ D + KV + + + H D L+V F + + ++VP+ G
Sbjct: 68 VIDGK------------KVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLEG- 114
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
++ G++ GG L R +K +++P + V++S L + + + G+L L+L+
Sbjct: 115 -LAEGVKAGGKLALQMRKIKVKALYNVIPEKLIVNVSHLGLGKTVKVGELS-FEGLELIS 172
Query: 238 SKDEPVCKI 246
+K+ VC +
Sbjct: 173 AKEAVVCAV 181
>gi|153807759|ref|ZP_01960427.1| hypothetical protein BACCAC_02042 [Bacteroides caccae ATCC 43185]
gi|423217580|ref|ZP_17204076.1| 50S ribosomal protein L25 [Bacteroides caccae CL03T12C61]
gi|149129368|gb|EDM20582.1| ribosomal protein L25, Ctc-form [Bacteroides caccae ATCC 43185]
gi|392628739|gb|EIY22765.1| 50S ribosomal protein L25 [Bacteroides caccae CL03T12C61]
Length = 196
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 24/189 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSR 117
R+S R + RK G VP +++ GGN+ + +V +R LV + + V
Sbjct: 16 RSSEQARALKEIRKNGGVPCVLY-------GGNEVVHFTVPNEGLRNLV-YTPHIYVVDL 67
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
+ D + KV + + + H D L+V F + + ++VP+ G
Sbjct: 68 IIDGK------------KVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLEG- 114
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
++ G++ GG L R +K +++P + V++S L + + + G+L L+L+
Sbjct: 115 -LAEGVKAGGKLALQMRKIKVKALYNVIPEKLTVNVSHLGLGKTVKVGELSFE-GLELMS 172
Query: 238 SKDEPVCKI 246
+K+ VC +
Sbjct: 173 AKEAVVCAV 181
>gi|254482824|ref|ZP_05096061.1| ribosomal protein L25, Ctc-form [marine gamma proteobacterium
HTCC2148]
gi|214036905|gb|EEB77575.1| ribosomal protein L25, Ctc-form [marine gamma proteobacterium
HTCC2148]
Length = 220
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 23/156 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFG 128
R AG+VP+I++ GG+K + +++ I K L F S++ ++ V E
Sbjct: 25 RLAGKVPAIIY-------GGDKDPQSLTLVRKDIEK---SLENEAFYSQVLEVNVAGEVQ 74
Query: 129 SGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLR-KGG 187
+ + + + H + ++ FLR + +K++VP+ F ++ G++ +GG
Sbjct: 75 --------KAILKDLQRHPAKNNVMHADFLRIDEKVAIKVNVPIHFLNEEDCAGVKMEGG 126
Query: 188 YLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKI 222
+ ++ C P DI P YI+VD+ E+ Q I
Sbjct: 127 MIQHQATDIEVSCLPGDI-PEYIEVDMLEVITGQII 161
>gi|383114761|ref|ZP_09935523.1| 50S ribosomal protein L25 [Bacteroides sp. D2]
gi|313693527|gb|EFS30362.1| 50S ribosomal protein L25 [Bacteroides sp. D2]
Length = 196
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 24/189 (12%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQ-IRKLVGHLGRSFFVSR 117
R+S R + RK G VP +++ GGN+ + TN+ +R LV + + V
Sbjct: 16 RSSEQARALKEIRKDGGVPCVLY-------GGNEVVHFTVTNEGLRNLV-YTPHIYVVDL 67
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
+ D + KV + + + H D L+V F + + ++VP+ G
Sbjct: 68 VIDGK------------KVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLEG- 114
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
++ G++ GG L R +K +++P + V++S L + + + G+L L+L+
Sbjct: 115 -LAEGVKAGGKLALQMRKIKVKALYNVIPEKLIVNVSHLGLGKTVKVGELS-FEGLELIS 172
Query: 238 SKDEPVCKI 246
+K+ VC +
Sbjct: 173 AKEAVVCAV 181
>gi|254284038|ref|ZP_04959006.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR51-B]
gi|219680241|gb|EED36590.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR51-B]
Length = 200
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + + D++V S V+ + + H P++ FLR + LK+ +P+
Sbjct: 31 FYTAIIDIDVEGTHES--------VILKDLQRHPAKGFPMHADFLRINADTELKVAIPIH 82
Query: 174 FRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
F +D G++ GG + + ++ C +P YI+VD++ LD+ I D+ +
Sbjct: 83 FMNEDTCVGVKVNGGVIQRQETDIEVSCLPRNIPEYIEVDMAALDIGDSIHLTDVTL 139
>gi|295132327|ref|YP_003583003.1| 50S ribosomal protein L25 [Zunongwangia profunda SM-A87]
gi|294980342|gb|ADF50807.1| 50S ribosomal protein L25/general stress protein Ctc [Zunongwangia
profunda SM-A87]
Length = 213
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 26/201 (12%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI R S G + + R AG+VP +++ GG+ + T +I
Sbjct: 5 TIKGSKRESVGKKATKALRNAGQVPCVLY-------GGDAEPLHFTTEEIS--------- 48
Query: 113 FFVSRLFDLEVRS---EFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKID 169
F ++ +V + E SG EK + + + H TD L+V F + ++
Sbjct: 49 -FQHLVYTPDVHTVVIELKSG---EKYNAILQDIQFHPVTDNILHVDFYEIFDNKPITME 104
Query: 170 VPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+P+ G V+ G++ GG L R +K ++P YI+ D+++L + QK+ ++
Sbjct: 105 IPIHTVG--VARGVKNGGVLRYNLRRLKVRGLPGVLPDYIEADVTKLKIGQKLYVTAVE- 161
Query: 230 HPALKLLRSKDEPVCKIAGGR 250
K+ + +C++ R
Sbjct: 162 SEDYKIQHPDNTVICQVRTSR 182
>gi|291296896|ref|YP_003508294.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus
ruber DSM 1279]
gi|290471855|gb|ADD29274.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus
ruber DSM 1279]
Length = 206
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R AG++P +V+ +++ N +++ V + K+ F++ + E +G
Sbjct: 19 RDAGKLPGVVYNRQE-----NYKVV-VDLKEFNKV--------FLAAGIHHVITLELENG 64
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
++ L R+V+L P +V F E +L + +P+ G + G+R+GG L
Sbjct: 65 KTVD---TLVRQVNLDKRRRRPDHVDFYALSDEPVL-MWIPIKIEG--TAQGVREGGVLQ 118
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
+ V+ +PP+I+VD+S L + I A +L++ P + L + + + I
Sbjct: 119 LVNNDVQVKVSPKAIPPHIEVDVSHLRIGDSIHANELRLPPGVTLAMNPSDTIVAI 174
>gi|145219519|ref|YP_001130228.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium
phaeovibrioides DSM 265]
gi|189042365|sp|A4SE17.1|RL25_PROVI RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|145205683|gb|ABP36726.1| LSU ribosomal protein L25P [Chlorobium phaeovibrioides DSM 265]
Length = 203
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 84/183 (45%), Gaps = 23/183 (12%)
Query: 69 KERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLF-DLEVRSEF 127
K RK+G VP++V+ + G +SV ++ KLV H S + F D +V+ F
Sbjct: 20 KIRKSGNVPAVVYHK-----GEETVAVSVNELELNKLV-HTAESHIIDLRFPDGKVKRSF 73
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
+ V H TD ++ F + ++++DVP+ G+ V G+ KGG
Sbjct: 74 ------------IKAVQFHPVTDRIIHTDFQLFAADEVIEMDVPVSVTGESV--GVDKGG 119
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL--KVHPALKLLRSKDEPVCK 245
L ++ + +P ++ +D++++++ + D+ + + L+++ + PV
Sbjct: 120 KLQILRHNLTLKGKPTDMPDHLVIDITDMEIGSIVHVKDIPAQSYENLEIMIDPETPVVS 179
Query: 246 IAG 248
+
Sbjct: 180 VVA 182
>gi|311746128|ref|ZP_07719913.1| ribosomal protein L25 [Algoriphagus sp. PR1]
gi|126576349|gb|EAZ80627.1| ribosomal protein L25 [Algoriphagus sp. PR1]
Length = 196
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 136 VRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRT 195
V+ + ++ H ++ L+ F+ + +K ++P+ G SPGL KGG L R+
Sbjct: 71 VKAVLKEAQFHPVSEVLLHADFMAFTNDKPIKFEIPVKVSGS--SPGLAKGGKLEFKTRS 128
Query: 196 VKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRASDQK 255
+K A +P YI+ D+S+LD+ + +LK ++L S + + I RA K
Sbjct: 129 LKVKGLAGDLPDYIEADISKLDLGKSFKVSELKAE-GFEILTSPNVSLVTIGIPRALRGK 187
Query: 256 K 256
K
Sbjct: 188 K 188
>gi|90416946|ref|ZP_01224875.1| probable ribosomal protein L25 [gamma proteobacterium HTCC2207]
gi|90331293|gb|EAS46537.1| probable ribosomal protein L25 [gamma proteobacterium HTCC2207]
Length = 215
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 20/180 (11%)
Query: 51 DETILAIPRASPGTRVSVKERK-AGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGH- 108
D T+ A R G S + R+ A VP+IV+ GG K Q + I K V
Sbjct: 4 DFTLHAKGREDTGKGASRRLRRLAAEVPAIVY-------GGKKT--PAQISLIHKDVAKA 54
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
L F S + L++ + S D+I K V H L++ FLR + LL+
Sbjct: 55 LENEAFYSHVIALDIDGK--SEDVILK------DVQRHPIKPVILHLDFLRVNKKTLLQT 106
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRT-VKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
P+ F +D+ G++ GG L T + C +P YI+VD++ +++ Q + D+
Sbjct: 107 KAPIHFINEDICVGVKIGGGLIAHTMTEIDISCLPQDLPEYIEVDMAAVEIGQTLHISDI 166
>gi|441497241|ref|ZP_20979458.1| LSU ribosomal protein L25p [Fulvivirga imtechensis AK7]
gi|441439042|gb|ELR72369.1| LSU ribosomal protein L25p [Fulvivirga imtechensis AK7]
Length = 177
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 135 KVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKR 194
+ + + + + H ++ L+V FL+ +K++VP+ F GD +PG+ KGG L +R
Sbjct: 38 EYKAIMQDLQFHPVSEVILHVDFLQLFEGKPIKMNVPVHFEGD--APGVTKGGTLIKKRR 95
Query: 195 --TVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
+VK L P D+ P YI V+LS+LD + I G+++
Sbjct: 96 YLSVKAL-PKDM-PEYITVNLSKLDFGKAIKVGEIE 129
>gi|16802257|ref|NP_463742.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes EGD-e]
gi|46906443|ref|YP_012832.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes serotype 4b str. F2365]
gi|47093153|ref|ZP_00230928.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes str. 4b H7858]
gi|47096204|ref|ZP_00233803.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes str. 1/2a F6854]
gi|217965703|ref|YP_002351381.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes HCC23]
gi|226222840|ref|YP_002756947.1| general stress protein [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|254825875|ref|ZP_05230876.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL J1-194]
gi|254829302|ref|ZP_05233989.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL N3-165]
gi|254854441|ref|ZP_05243789.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL R2-503]
gi|254913928|ref|ZP_05263940.1| general stress protein Ctc [Listeria monocytogenes J2818]
gi|254933051|ref|ZP_05266410.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes HPB2262]
gi|254938281|ref|ZP_05269978.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes F6900]
gi|254992856|ref|ZP_05275046.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes FSL J2-064]
gi|255026020|ref|ZP_05298006.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes FSL J2-003]
gi|255028168|ref|ZP_05300119.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes LO28]
gi|255520467|ref|ZP_05387704.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes FSL J1-175]
gi|284803050|ref|YP_003414915.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes 08-5578]
gi|284996191|ref|YP_003417959.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes 08-5923]
gi|290894281|ref|ZP_06557248.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL J2-071]
gi|300766344|ref|ZP_07076303.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL N1-017]
gi|386006940|ref|YP_005925218.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes L99]
gi|386025520|ref|YP_005946296.1| ribosomal protein L25 (general stress protein Ctc) [Listeria
monocytogenes M7]
gi|386042548|ref|YP_005961353.1| 50S ribosomal protein L25 Ctc-form [Listeria monocytogenes 10403S]
gi|386045849|ref|YP_005964181.1| 50S ribosomal protein L25 Ctc-form [Listeria monocytogenes J0161]
gi|386049140|ref|YP_005967131.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL R2-561]
gi|386052488|ref|YP_005970046.1| 50S ribosomal protein L25 [Listeria monocytogenes Finland 1998]
gi|386730976|ref|YP_006204472.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes 07PF0776]
gi|404279761|ref|YP_006680659.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2755]
gi|404282642|ref|YP_006683539.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2372]
gi|404285578|ref|YP_006692164.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|404406664|ref|YP_006689379.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2376]
gi|404409444|ref|YP_006695032.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC5850]
gi|404412311|ref|YP_006697898.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC7179]
gi|405748553|ref|YP_006672019.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes ATCC 19117]
gi|405751427|ref|YP_006674892.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2378]
gi|405757198|ref|YP_006686474.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2479]
gi|406702983|ref|YP_006753337.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes L312]
gi|417314256|ref|ZP_12100961.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes J1816]
gi|417318672|ref|ZP_12105245.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes J1-220]
gi|424713075|ref|YP_007013790.1| 50S ribosomal protein L25 [Listeria monocytogenes serotype 4b str.
LL195]
gi|424821940|ref|ZP_18246953.1| 50S ribosomal protein L25 [Listeria monocytogenes str. Scott A]
gi|71153150|sp|Q724K2.1|RL25_LISMF RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71153151|sp|Q8YAD3.1|RL25_LISMO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|16409576|emb|CAD00738.1| ctc [Listeria monocytogenes EGD-e]
gi|46879707|gb|AAT03009.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes serotype 4b str. F2365]
gi|47015452|gb|EAL06386.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes str. 1/2a F6854]
gi|47018460|gb|EAL09218.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes serotype 4b str. H7858]
gi|118420012|gb|ABK88268.1| general stress protein Ctc [Listeria monocytogenes]
gi|217334973|gb|ACK40767.1| ribosomal protein L25, Ctc-form [Listeria monocytogenes HCC23]
gi|225875302|emb|CAS03999.1| Putative general stress protein [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258601715|gb|EEW15040.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL N3-165]
gi|258607841|gb|EEW20449.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL R2-503]
gi|258610892|gb|EEW23500.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes F6900]
gi|284058612|gb|ADB69553.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes 08-5578]
gi|284061658|gb|ADB72597.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes 08-5923]
gi|290556165|gb|EFD89712.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL J2-071]
gi|293584609|gb|EFF96641.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes HPB2262]
gi|293591946|gb|EFG00281.1| general stress protein Ctc [Listeria monocytogenes J2818]
gi|293595114|gb|EFG02875.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL J1-194]
gi|300512943|gb|EFK40031.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL N1-017]
gi|307569750|emb|CAR82929.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes L99]
gi|328467967|gb|EGF38994.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes J1816]
gi|328469739|gb|EGF40661.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes J1-220]
gi|332310620|gb|EGJ23715.1| 50S ribosomal protein L25 [Listeria monocytogenes str. Scott A]
gi|336022101|gb|AEH91238.1| ribosomal protein L25 (general stress protein Ctc) [Listeria
monocytogenes M7]
gi|345532840|gb|AEO02281.1| 50S ribosomal protein L25 Ctc-form [Listeria monocytogenes J0161]
gi|345535782|gb|AEO05222.1| 50S ribosomal protein L25 Ctc-form [Listeria monocytogenes 10403S]
gi|346422986|gb|AEO24511.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL R2-561]
gi|346645139|gb|AEO37764.1| 50S ribosomal protein L25 [Listeria monocytogenes Finland 1998]
gi|384389734|gb|AFH78804.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes 07PF0776]
gi|404217753|emb|CBY69117.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes ATCC 19117]
gi|404220627|emb|CBY71990.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2378]
gi|404226396|emb|CBY47801.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2755]
gi|404229270|emb|CBY50674.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC5850]
gi|404232144|emb|CBY53547.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2372]
gi|404235080|emb|CBY56482.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2479]
gi|404238010|emb|CBY59411.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC7179]
gi|404240813|emb|CBY62213.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2376]
gi|404244507|emb|CBY02732.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|406360013|emb|CBY66286.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes L312]
gi|424012259|emb|CCO62799.1| 50S ribosomal protein L25 [Listeria monocytogenes serotype 4b str.
LL195]
gi|441469759|emb|CCQ19514.1| 50S ribosomal protein L25 [Listeria monocytogenes]
gi|441472895|emb|CCQ22649.1| 50S ribosomal protein L25 [Listeria monocytogenes N53-1]
Length = 207
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 19/184 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R G+VP I++ G N +SV + ++ K V GR+ S D +
Sbjct: 22 RSEGKVPGIIY----GYKSENVP-VSVDSLELIKAVRDNGRNAVFSVTVDGK-------- 68
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
K+ VL + + D ++V L ++ DV +V GD +PG++ GG L
Sbjct: 69 ----KLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVGD--APGVKAGGVLQ 122
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGR 250
I VK + +P I++D+S L++ + DL + + ++E V ++ R
Sbjct: 123 QIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQAEEEETVVTVSAPR 182
Query: 251 ASDQ 254
A ++
Sbjct: 183 AEEE 186
>gi|16799320|ref|NP_469588.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
innocua Clip11262]
gi|422411571|ref|ZP_16488530.1| ribosomal protein L25, Ctc-form [Listeria innocua FSL S4-378]
gi|422414645|ref|ZP_16491602.1| ribosomal protein L25, Ctc-form [Listeria innocua FSL J1-023]
gi|423100946|ref|ZP_17088650.1| ribosomal protein L25, Ctc-form [Listeria innocua ATCC 33091]
gi|71153149|sp|Q92F64.1|RL25_LISIN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|16412672|emb|CAC95476.1| ctc [Listeria innocua Clip11262]
gi|117957151|gb|ABK59047.1| Ctc [Listeria innocua]
gi|117957159|gb|ABK59054.1| Ctc [Listeria innocua]
gi|118723078|gb|ABL10242.1| general stress protein [Listeria innocua]
gi|118723086|gb|ABL10249.1| general stress protein [Listeria innocua]
gi|118723094|gb|ABL10256.1| general stress protein [Listeria innocua]
gi|118723102|gb|ABL10263.1| general stress protein [Listeria innocua]
gi|118723110|gb|ABL10270.1| general stress protein [Listeria innocua]
gi|118723118|gb|ABL10277.1| general stress protein [Listeria innocua]
gi|118723126|gb|ABL10284.1| general stress protein [Listeria innocua]
gi|313621020|gb|EFR92141.1| ribosomal protein L25, Ctc-form [Listeria innocua FSL S4-378]
gi|313625452|gb|EFR95201.1| ribosomal protein L25, Ctc-form [Listeria innocua FSL J1-023]
gi|370792482|gb|EHN60349.1| ribosomal protein L25, Ctc-form [Listeria innocua ATCC 33091]
Length = 207
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 19/184 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R G+VP I++ G N +SV + ++ K V GR+ S D +
Sbjct: 22 RSEGKVPGIIY----GYKSENVP-VSVDSLELIKAVRDNGRNAVFSVTVDGK-------- 68
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
K+ VL + + D ++V L ++ DV +V GD +PG++ GG L
Sbjct: 69 ----KLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVGD--APGVKAGGVLQ 122
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGR 250
I VK + +P I++D+S L++ + DL + + ++E V ++ R
Sbjct: 123 QIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQAEEEETVVTVSAPR 182
Query: 251 ASDQ 254
A ++
Sbjct: 183 AEEE 186
>gi|385809174|ref|YP_005845570.1| 50S ribosomal protein L25P [Ignavibacterium album JCM 16511]
gi|383801222|gb|AFH48302.1| Ribosomal protein L25P [Ignavibacterium album JCM 16511]
Length = 213
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 22/204 (10%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R +P + RK+G+VP + + + I V + I+ LV
Sbjct: 5 TLEAKKRQTPTKSALNQLRKSGKVPGVFYSKHH-----EPITIEVPESAIKPLV------ 53
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F S+ + + + G EK + + V TD ++ + ++ +VP+
Sbjct: 54 -FTSKTSWISLSLDSG-----EKYDCVIKDVQFDPVTDKIVHFDLIGLQVGEKIQFEVPV 107
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKVHP 231
+ +G + G+++GG + ++ C P DI P +I+VD++ L + I DL V P
Sbjct: 108 LLKGTAI--GVKEGGVVQHFAHKLEVECLPTDI-PEHIEVDITNLKIGDSIHVSDLSV-P 163
Query: 232 ALKLLRSKDEPVCKIAGGRASDQK 255
+ + S D V + RA ++
Sbjct: 164 GISFITSADALVVSVTHPRAEKEE 187
>gi|380764231|pdb|3TVE|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Leu Complex
Length = 175
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 139 LPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKF 198
L R+V+L P +V F E + ++ VPL F G G+R GG L I R +
Sbjct: 70 LVRQVNLDKRRRRPEHVDFFVLSDEPV-EMYVPLRFVG--TPAGVRAGGVLQEIHRDILV 126
Query: 199 LCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA 247
+P +I+VD+S L++ + A DLK+ P ++L S +E + +
Sbjct: 127 KVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAVV 175
>gi|390956456|ref|YP_006420213.1| 50S ribosomal protein L25 [Terriglobus roseus DSM 18391]
gi|390411374|gb|AFL86878.1| ribosomal protein L25, Ctc-form [Terriglobus roseus DSM 18391]
Length = 223
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 26/181 (14%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLV----GHLGRSFFVSRLFDLEVRSE 126
R +G +P++++ G + I+V I K++ GH + +FDL + +
Sbjct: 26 RVSGLIPAVIYGA-----GIESQAITVDPKSILKILHSESGH-------NTIFDLNIENG 73
Query: 127 FGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKG 186
G+ +I + P K L L++ R + +K+ VP++ G V + G
Sbjct: 74 AGAKAMIVDWQYEPIKGKL-------LHIDLKRIAMDKTMKVSVPVMLSGIPVGVKM-GG 125
Query: 187 GYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCK 245
G L+ + R ++ C P DI P +ID+D++ L++ I DL ++K L + V
Sbjct: 126 GVLDQVLREIEVECFPGDI-PSHIDIDVTNLELHGAIHVSDLPHTGSVKFLAEETALVAH 184
Query: 246 I 246
+
Sbjct: 185 V 185
>gi|381191053|ref|ZP_09898565.1| 50S ribosomal protein L25/general stress protein Ctc [Thermus sp.
RL]
gi|380451142|gb|EIA38754.1| 50S ribosomal protein L25/general stress protein Ctc [Thermus sp.
RL]
Length = 206
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 139 LPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKF 198
L R+V+L P +V F E + ++ VPL F G G+R GG L I R +
Sbjct: 70 LVRQVNLDKRRRRPEHVDFFVLSDEPV-EMYVPLRFVG--TPAGVRXGGVLQEIHRDILV 126
Query: 199 LCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA 247
+P +I+VD+S L++ + A DLK+ P ++L S +E + +
Sbjct: 127 KVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAVV 175
>gi|261405476|ref|YP_003241717.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Paenibacillus
sp. Y412MC10]
gi|261281939|gb|ACX63910.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus
sp. Y412MC10]
Length = 210
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 91/186 (48%), Gaps = 26/186 (13%)
Query: 64 TRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSRLFDL 121
TR S +E R++G +P +V+ G + + ++V KL H GRS +F L
Sbjct: 18 TRASRRELRESGGLPGVVY------GAGEESIPVAVDFKDTAKLF-HTGRS----EVFQL 66
Query: 122 EVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSP 181
++ GSG KV VL + + G + +V FLR +++ +P+ ++G +
Sbjct: 67 DIP---GSG----KVPVLIKDIQKRRGNVS--HVDFLRISMNKPVRVSIPVDYQG--TAA 115
Query: 182 GLRKGGYLNTIKRTVKFL-CPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKD 240
G + GG L T ++ P D+ P ++ D+S L++ K+ DLKV + L S++
Sbjct: 116 GTKSGGILQTQVTEIEVEGLPGDL-PTTLEADVSALEIGDKLTVADLKVPEGITLHASEE 174
Query: 241 EPVCKI 246
E + +
Sbjct: 175 EILATV 180
>gi|254515307|ref|ZP_05127368.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR5-3]
gi|219677550|gb|EED33915.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR5-3]
Length = 220
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 102 IRK-LVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRA 160
IRK L L F S++ D+ V + L + + H + ++ FLR
Sbjct: 47 IRKDLEKSLENEAFFSQVIDVNVDGDVQPAIL--------KDLQRHPARNDVMHADFLRV 98
Query: 161 PPEALLKIDVPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVE 219
+ +K+ VPL F ++ G++ +GG + + ++ LC ++P YI+VD+ +
Sbjct: 99 DAKVAIKVSVPLHFINEEKCHGVKIEGGIIEHMLTELEVLCLPGLIPEYIEVDMENVTTA 158
Query: 220 QKILAGDLK-----VHPALKLLRSKDEPVCKIAGGRA 251
+ DLK V AL+L D V ++ R
Sbjct: 159 DILHISDLKLPEGVVSTALELGEDHDMAVTTVSAKRG 195
>gi|46199527|ref|YP_005194.1| 50S ribosomal protein L25 [Thermus thermophilus HB27]
gi|55981558|ref|YP_144855.1| 50S ribosomal protein L25 [Thermus thermophilus HB8]
gi|384431772|ref|YP_005641132.1| 50S ribosomal protein L25 [Thermus thermophilus SG0.5JP17-16]
gi|386359906|ref|YP_006058151.1| 50S ribosomal protein L25 [Thermus thermophilus JL-18]
gi|62287407|sp|Q5SHZ1.1|RL25_THET8 RecName: Full=50S ribosomal protein L25; Short=TL5
gi|71153670|sp|Q72IA7.1|RL25_THET2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|116668257|pdb|2J01|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4).
This File Contains The 50s Subunit From Molecule I.
gi|116668318|pdb|2J03|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 4 Of 4).
This File Contains The 50s Subunit From Molecule Ii.
gi|119389755|pdb|2HGJ|Y Chain Y, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
Showing How The 16s 3'-End Mimicks Mrna E And P Codons.
This Entry 2hgj Contains 50s Ribosomal Subunit. The 30s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgi.
gi|119389812|pdb|2HGQ|Y Chain Y, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
With Translocated And Rotated Shine-Dalgarno Duplex.
This Entry 2hgq Contains 50s Ribosomal Subunit. The 30s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgp.
gi|119389868|pdb|2HGU|Y Chain Y, 70s T.Th. Ribosome Functional Complex With Mrna And E- And
P-Site Trnas At 4.5a. This Entry 2hgu Contains 50s
Ribosomal Subunit. The 30s Ribosomal Subunit Can Be
Found In Pdb Entry 2hgr.
gi|149240905|pdb|1VSA|T Chain T, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
Functional Interactions And Rearrangements. This File,
1vsa, Contains The 50s Ribosome Subunit. 30s Ribosome
Subunit Is In The File 2ow8
gi|157836540|pdb|2V47|Z Chain Z, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 2 Of 4). This File Contains The 50s
Subunit For Molecule 1.
gi|157836596|pdb|2V49|Z Chain Z, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 4 Of 4). This File Contains The 50s
Subunit Of Molecule 2.
gi|160285447|pdb|1VSP|T Chain T, Interactions And Dynamics Of The Shine-Dalgarno Helix In
The 70s Ribosome. This File, 1vsp, Contains The 50s
Ribosome Subunit. 30s Ribosome Subunit Is In The File
2qnh
gi|209156539|pdb|3D5B|Z Chain Z, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 50s Subunit Of One 70s
Ribosome. The Entire Crystal Structure Contains Two 70s
Ribosomes As Described In Remark 400.
gi|209156593|pdb|3D5D|Z Chain Z, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 50s Subunit Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|218766816|pdb|3F1F|Z Chain Z, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes As Described In
Remark 400.
gi|218766872|pdb|3F1H|Z Chain Z, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
50s Subunit Of The Second 70s Ribosome. The Entire
Crystal Structure Contains Two 70s Ribosomes As
Described In Remark 400.
gi|226887455|pdb|2WDI|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 50s Subunit For Molecule I.
gi|226887487|pdb|2WDJ|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 50s Subunit For Molecule Ii.
gi|226887544|pdb|2WDL|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 50s
Subunit For Molecule I.
gi|226887601|pdb|2WDN|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 50s
Subunit For Molecule Ii.
gi|237823587|pdb|2WH2|Z Chain Z, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome
gi|237823646|pdb|2WH4|Z Chain Z, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome
gi|260100031|pdb|3HUX|Z Chain Z, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 50s Subunit For Molecule I.
gi|260100087|pdb|3HUZ|Z Chain Z, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 50s Subunit For Molecule Ii.
gi|261824545|pdb|2WRJ|Z Chain Z, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 2 Of 4).
gi|261824607|pdb|2WRL|Z Chain Z, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State. (Part 4 Of
4).
gi|261824666|pdb|2WRO|Z Chain Z, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 2 Of 4).
gi|261824725|pdb|2WRR|Z Chain Z, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 4 Of 4).
gi|281307213|pdb|3KIR|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 2 Of 4)
gi|281307271|pdb|3KIT|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 4 Of 4)
gi|281307329|pdb|3KIW|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 2 Of 4)
gi|281307387|pdb|3KIY|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 4 Of 4)
gi|288965650|pdb|3KNI|Z Chain Z, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 50s Subunit For Molecule I
gi|288965682|pdb|3KNK|Z Chain Z, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 50s Subunit For Molecule Ii.
gi|288965714|pdb|3KNM|Z Chain Z, The Structures Of Capreomycin Bound To The 70s Ribosome.
Thi Contains The 50s Subunit For Molecule I.
gi|288965746|pdb|3KNO|Z Chain Z, The Structures Of Capreomycin Bound To The 70s Ribosome.
Thi Contains The 50s Subunit For Molecule Ii
gi|294979494|pdb|3I8F|V Chain V, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8f Contains 50s Ribosomal Subunit. The 30s
Ribosoma Can Be Found In Pdb Entry 3i8g. Molecule B In
The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
(50s).
gi|294979578|pdb|3I8I|V Chain V, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8i Contains 50s Ribosomal Subnit. The 30s
Ribosomal Can Be Found In Pdb Entry 3i8h. Molecule A In
The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
(30s).
gi|294979632|pdb|3I9C|V Chain V, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9c Contains 50s Ribosomal Subunit Of Molecule B.
The 30s Subunit Can Be Found In Pdb Entry 3i9b. Molecule
A In The S Asymmetric Unit Is Deposited As 3i9d (30s)
And 3i9e (50s)
gi|294979686|pdb|3I9E|V Chain V, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9e Contains 50s Ribosomal Subunit Of Molecule A.
The 30s Subunit Can Be Found In Pdb Entry 3i9d. Molecule
B In The S Asymmetric Unit Is Deposited As 3i9b (30s)
And 3i9c (50s)
gi|295982133|pdb|2X9S|Z Chain Z, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|295982192|pdb|2X9U|Z Chain Z, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|300508650|pdb|3MRZ|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3mrz Contains 50s Ribosomal Subunit. The 30s
Ribosomal Subunit Can Be Found In Pdb Entry 3ms0.
Molecule A In The Same Asymmetric Unit Is Deposited As
3mr8 (50s) And 3ms1 (30s).
gi|300508705|pdb|3MS1|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3ms1 Contains 50s Ribosomal Subunit. The 30s
Ribosomal Subunit Can Be Found In Pdb Entry 3mr8.
Molecule B In The Same Asymmetric Unit Is Deposited As
3mrz (50s) And 3ms0 (30s).
gi|307568019|pdb|2XG0|Z Chain Z, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 2 Of 4)
gi|307568077|pdb|2XG2|Z Chain Z, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 4 Of 4)
gi|309320306|pdb|3OH5|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Chloramphenicol. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320336|pdb|3OH7|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Chloramphenicol. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320408|pdb|3OHJ|Z Chain Z, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 50s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320438|pdb|3OHK|Z Chain Z, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 50s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320489|pdb|3OHZ|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 50s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320540|pdb|3OI1|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 50s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320591|pdb|3OI3|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 50s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320642|pdb|3OI5|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 50s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|312207731|pdb|2XQE|Z Chain Z, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s
Ribosome With A Gtp Analog
gi|313754055|pdb|2XTG|Z Chain Z, Trna Tranlocation On The 70s Ribosome: The Pre-
Translocational Translocation Intermediate Ti(Pre)
gi|313754113|pdb|2XUX|Z Chain Z, Trna Translocation On The 70s Ribosome: The Post-
Translocational Translocation Intermediate Ti(Post)
gi|325533460|pdb|2Y0V|Z Chain Z, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533519|pdb|2Y0X|Z Chain Z, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533578|pdb|2Y0Z|Z Chain Z, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533637|pdb|2Y11|Z Chain Z, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|325533696|pdb|2Y13|Z Chain Z, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533755|pdb|2Y15|Z Chain Z, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533814|pdb|2Y17|Z Chain Z, Ef-Tu Complex 3
gi|325533873|pdb|2Y19|Z Chain Z, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|347948851|pdb|3ZVP|Z Chain Z, Crystal Structure Of The Hybrid State Of Ribosome In
Complex With The Guanosine Triphosphatase Release Factor
3
gi|374074465|pdb|3UXQ|Z Chain Z, The Structure Of Thermorubin In Complex With The 70s
Ribosome From Thermus Thermophilus. This File Contains
The 50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|374074495|pdb|3UXR|Z Chain Z, The Structure Of Thermorubin In Complex With The 70s
Ribosome From Thermus Thermophilus. This File Contains
The 50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|380764389|pdb|3UYE|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex
gi|380764446|pdb|3UYG|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex
gi|380764480|pdb|3UZ1|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex With Paromomycin
gi|380764510|pdb|3UZ2|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex With Paromomycin.
gi|380764642|pdb|3UZ8|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Tyr Complex.
gi|380764672|pdb|3UZ9|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Tyr Complex.
gi|380764706|pdb|3UZF|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex
gi|380764762|pdb|3UZH|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex.
gi|380764818|pdb|3UZK|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex With Paromomycin
gi|380764899|pdb|3UZN|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-cognate
Trna-tyr Complex With Paromomycin
gi|381353146|pdb|4ABS|Z Chain Z, Complex Of Smpb, A Tmrna Fragment And Ef-Tu-Gdp-Kirromycin
With The 70s Ribosome
gi|381353236|pdb|4DHA|Z Chain Z, Crystal Structure Of Yaej Bound To The 70s Ribosome
gi|381353290|pdb|4DHC|Z Chain Z, Crystal Structure Of Yaej Bound To The 70s Ribosome
gi|388325985|pdb|3V23|Z Chain Z, Crystal Structure Of Rmf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 50s Subunit Of
The 1st Ribosome In The Asu
gi|388326038|pdb|3V25|Z Chain Z, Crystal Structure Of Rmf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 50s Subunit Of
The 2nd Ribosome In The Asu
gi|388326091|pdb|3V27|Z Chain Z, Crystal Structure Of Hpf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 50s Subunit Of
The 1st Ribosome In The Asu
gi|388326214|pdb|3V29|Z Chain Z, Crystal Structure Of Hpf Bound To The 70s Ribosome. This
Entry Contains The 50s Subunit Of The 2nd Molecule In
The Asu.
gi|388326267|pdb|3V2D|Z Chain Z, Crystal Structure Of Yfia Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 50s Subunit Of
The 1st Ribosome In The Asu
gi|388326320|pdb|3V2F|Z Chain Z, Crystal Structure Of Yfia Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 50s Subunit Of
The 2nd Ribosome In The Asu
gi|451928732|pdb|4G5L|V Chain V, Crystal Structure Of The 70s Ribosome With Tetracycline.
This Entry Contains The 50s Subunit Of Molecule A.
gi|451928785|pdb|4G5N|V Chain V, Crystal Structure Of The 70s Ribosome With Tetracycline.
This Entry Contains The 50s Subunit Of Molecule B.
gi|451928839|pdb|4G5U|V Chain V, Crystal Structure Of The 70s Ribosome With Tigecycline.
This Entry Contains The 50s Subunit Of Molecule A.
gi|451928893|pdb|4G5W|V Chain V, Crystal Structure Of The 70s Ribosome With Tigecycline.
This Entry Contains The 50s Subunit Of Molecule B.
gi|46197153|gb|AAS81567.1| LSU ribosomal protein L25P [Thermus thermophilus HB27]
gi|55772971|dbj|BAD71412.1| 50S ribosomal protein L25 (TL5) [Thermus thermophilus HB8]
gi|333967240|gb|AEG34005.1| 50S ribosomal protein L25 [Thermus thermophilus SG0.5JP17-16]
gi|383508933|gb|AFH38365.1| ribosomal protein L25, Ctc-form [Thermus thermophilus JL-18]
Length = 206
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 139 LPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKF 198
L R+V+L P +V F E + ++ VPL F G G+R GG L I R +
Sbjct: 70 LVRQVNLDKRRRRPEHVDFFVLSDEPV-EMYVPLRFVG--TPAGVRAGGVLQEIHRDILV 126
Query: 199 LCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA 247
+P +I+VD+S L++ + A DLK+ P ++L S +E + +
Sbjct: 127 KVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAVV 175
>gi|380764312|pdb|3TVH|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Leu Complex
Length = 179
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 139 LPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKF 198
L R+V+L P +V F E + ++ VPL F G G+R GG L I R +
Sbjct: 70 LVRQVNLDKRRRRPEHVDFFVLSDEPV-EMYVPLRFVG--TPAGVRAGGVLQEIHRDILV 126
Query: 199 LCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA 247
+P +I+VD+S L++ + A DLK+ P ++L S +E + +
Sbjct: 127 KVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAVV 175
>gi|329925390|ref|ZP_08280312.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF5]
gi|328939877|gb|EGG36214.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF5]
Length = 210
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 91/186 (48%), Gaps = 26/186 (13%)
Query: 64 TRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSRLFDL 121
TR S +E R++G +P +V+ G + + ++V KL H GRS +F L
Sbjct: 18 TRASRRELRESGGLPGVVY------GAGEESIPVAVDFKDTAKLF-HTGRS----EVFQL 66
Query: 122 EVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSP 181
++ GSG KV VL + + G + +V FLR +++ +P+ ++G +
Sbjct: 67 DIP---GSG----KVPVLIKDIQKRRGNVS--HVDFLRISMNKPVRVSIPVDYQG--TAA 115
Query: 182 GLRKGGYLNTIKRTVKFL-CPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKD 240
G + GG L T ++ P D+ P ++ D+S L++ K+ DLKV + L S++
Sbjct: 116 GTKSGGILQTQVTEIEVEGLPGDL-PTTLEADVSTLEIGDKLTVADLKVPEGITLHASEE 174
Query: 241 EPVCKI 246
E + +
Sbjct: 175 EILATV 180
>gi|90408736|ref|ZP_01216883.1| Ribosomal protein L25 [Psychromonas sp. CNPT3]
gi|90310153|gb|EAS38291.1| Ribosomal protein L25 [Psychromonas sp. CNPT3]
Length = 205
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 22/177 (12%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISV--QTNQIRKLVGHLGR 111
++A R G S + R A VP IV+ G K IS+ + ++RK+
Sbjct: 5 LVAQTRTDLGKGASRRLRHAELVPGIVY-------GIGKDPISLTFEQKELRKIES---V 54
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
F S + DLE+ +EKV + + + H+ + ++ LR L+ +P
Sbjct: 55 EAFYSSILDLEIDGT------VEKV--VLKALQRHAFKEQIQHLDLLRVDASHKLQTTIP 106
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILAGDL 227
L F D + L+ GG L I V C P D+ P +I DL+ L++ + DL
Sbjct: 107 LHFINADTNEALKAGGVLTQIMNEVSISCLPTDL-PAFITADLANLEMGTSLHISDL 162
>gi|405754293|ref|YP_006677757.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2540]
gi|404223493|emb|CBY74855.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2540]
Length = 207
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 19/184 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R G+VP I++ G N +SV + ++ K V GR+ S D +
Sbjct: 22 RSEGKVPGIIY----GYKSENVP-VSVDSLELIKAVRDNGRNAVFSVTVDGK-------- 68
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
K+ VL + + D ++V L ++ DV +V GD +PG++ GG L
Sbjct: 69 ----KLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVGD--APGVKAGGVLQ 122
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGR 250
I VK + +P I++D+S L++ + DL + + ++E V ++ R
Sbjct: 123 QIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQAGEEETVVTVSAPR 182
Query: 251 ASDQ 254
A ++
Sbjct: 183 AEEE 186
>gi|312144320|ref|YP_003995766.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium
hydrogeniformans]
gi|311904971|gb|ADQ15412.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium
hydrogeniformans]
Length = 226
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 21/190 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R G V+ K R+ G++P +V+ + G + + I + + I KL F + +
Sbjct: 11 RTESGKGVARKIRRDGKIPGVVYGR-----GKDPKSIKLDPSDIEKL-------LFSNAI 58
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
DL V + G E+ V+ + L+V F + + + VPL G
Sbjct: 59 IDLTVADDDG-----EESTVIIKDFQKSVIKRELLHVDFQYISMDEKITVSVPLHLEG-- 111
Query: 179 VSPGLRKGGYLNTIKRTVKF-LCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
+ G+ GG L + R V PA+I P I +D+S+L++ + A DL + + L+
Sbjct: 112 TAAGVHDGGVLQQLLRNVDIDALPAEI-PSEITIDISDLEMGDSLSAADLDLPEGIDLVT 170
Query: 238 SKDEPVCKIA 247
E + +
Sbjct: 171 DSSEVIVTVV 180
>gi|62297563|sp|P56930.3|RL25_THETH RecName: Full=50S ribosomal protein L25; Short=TL5
gi|14719583|pdb|1FEU|A Chain A, Crystal Structure Of Ribosomal Protein Tl5, One Of The Ctc
Family Proteins, Complexed With A Fragment Of 5s Rrna.
gi|14719586|pdb|1FEU|D Chain D, Crystal Structure Of Ribosomal Protein Tl5, One Of The Ctc
Family Proteins, Complexed With A Fragment Of 5s Rrna.
gi|5640135|emb|CAA64209.1| ribosomal protein TL5 [Thermus thermophilus]
Length = 206
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 139 LPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKF 198
L R+V+L P +V F E + ++ VPL F G G+R GG L I R +
Sbjct: 70 LVRQVNLDKRRRRPEHVDFFVLSDEPV-EMYVPLRFVG--TPAGVRAGGVLQEIHRDILV 126
Query: 199 LCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA 247
+P +I+VD+S L++ + A DLK+ P ++L S +E + +
Sbjct: 127 KVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAVV 175
>gi|224510801|pdb|3FIN|Z Chain Z, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
And Ef- Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
6.4 A Cryo-Em Map. This File Contains The 50s Subunit
Length = 177
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 139 LPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKF 198
L R+V+L P +V F E + ++ VPL F G G+R GG L I R +
Sbjct: 68 LVRQVNLDKRRRRPEHVDFFVLSDEPV-EMYVPLRFVG--TPAGVRAGGVLQEIHRDILV 124
Query: 199 LCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA 247
+P +I+VD+S L++ + A DLK+ P ++L S +E + +
Sbjct: 125 KVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAVV 173
>gi|320109099|ref|YP_004184689.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Terriglobus
saanensis SP1PR4]
gi|319927620|gb|ADV84695.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Terriglobus
saanensis SP1PR4]
Length = 233
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 29/202 (14%)
Query: 52 ETILAIPRASPGTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLV---- 106
E I A+PR + + R +G +P++V+ G + ++V I +++
Sbjct: 7 EAIAAVPRTGKFNKNHARRVRVSGLIPAVVYGA-----GQDSVAVTVDPKAITRILHSES 61
Query: 107 GHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALL 166
GH + +FDL V +I + P K L L++ F R + +
Sbjct: 62 GH-------NTIFDLSVEGTGVVKAMIVDWQYEPIKGKL-------LHIDFKRIAMDKAM 107
Query: 167 KIDVPLVFRGDDVSPGLRK-GGYLNTIKRTVKFLC-PADIVPPYIDVDLSELDVEQKILA 224
++ VP++ G V G++ GG L+ I R V+ C P DI P +IDVD++ L++ I
Sbjct: 108 RVSVPVMLTG--VPVGVKNSGGILDQILREVQIECLPGDI-PSHIDVDVAGLELYGAIHV 164
Query: 225 GDLKVHPALKLLRSKDEPVCKI 246
DL +K L + V +
Sbjct: 165 ADLPHGGKIKFLEEETALVAHV 186
>gi|116871593|ref|YP_848374.1| 50S ribosomal protein L25 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116740471|emb|CAK19591.1| ribosomal 50S general stress protein L25/Ctc [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 207
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 19/184 (10%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R G+VP I++ G N +SV + ++ K V GR+ S D +
Sbjct: 22 RSEGKVPGIIY----GYKSENVP-VSVDSLELIKAVRDNGRNAVFSVTVDGK-------- 68
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
K+ VL + + D ++V L ++ DV +V GD +PG++ GG L
Sbjct: 69 ----KLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVGD--APGVKAGGVLQ 122
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGR 250
I VK + +P I++D+S L++ + DL + + ++E V ++ R
Sbjct: 123 QIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPNNKDYVVQAEEEETVVTVSAPR 182
Query: 251 ASDQ 254
A ++
Sbjct: 183 AEEE 186
>gi|257455798|ref|ZP_05621024.1| ribosomal protein L25, Ctc-form [Enhydrobacter aerosaccus SK60]
gi|257446812|gb|EEV21829.1| ribosomal protein L25, Ctc-form [Enhydrobacter aerosaccus SK60]
Length = 241
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 15/167 (8%)
Query: 63 GTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLE 122
G S + RK VP+IV+ G +K S+ + +L+ L F S + +
Sbjct: 19 GKGASRRLRKQNLVPAIVY-------GADKEPASIAI-RYNELIKSLETESFFSHILTIN 70
Query: 123 VRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPG 182
V + G+ +++ ++ L R H + P++ F R + I VP+ + G + +PG
Sbjct: 71 VEGQ-GTEEVV--IKALQR----HPAKNTPMHADFQRIVRGQAMHITVPVHYVGAEDAPG 123
Query: 183 LRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 229
+ GG + ++ +P Y+ VD+S ++V I D+++
Sbjct: 124 HKAGGIFVSNATELEITAIPSKIPEYLTVDVSGMNVGDSIHLLDIQL 170
>gi|428223104|ref|YP_007107274.1| 50S ribosomal protein L25 [Synechococcus sp. PCC 7502]
gi|427996444|gb|AFY75139.1| ribosomal protein L25, Ctc-form [Synechococcus sp. PCC 7502]
Length = 186
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ GRVP+ ++ G G ++V T L L ++ + L D+ V SG
Sbjct: 20 RRGGRVPATIY----GHKGAESTAVTVNTKDAITL---LRQAVVNNTLIDVNVTDGDFSG 72
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
+ +L R+V H + +++F ++ +++ +P+ F G V + G +
Sbjct: 73 -----ITIL-REVQYHPYKNDIYHISFFSIASQSKIEVSIPVTFVGVPVGVKVGGG-SVE 125
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGR 250
+ ++ CP +P +VD+S+LDV Q + D+ + + + + IAGGR
Sbjct: 126 VLMNEIQVSCPPTAIPVSFEVDISKLDVGQGLHVSDIVLPEGVSVTSDGTPLLITIAGGR 185
>gi|424662254|ref|ZP_18099291.1| 50S ribosomal protein L25 [Bacteroides fragilis HMW 616]
gi|404578043|gb|EKA82779.1| 50S ribosomal protein L25 [Bacteroides fragilis HMW 616]
Length = 196
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 84/188 (44%), Gaps = 22/188 (11%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
R+S R + R G VP +++ ++ H +V +R LV + + V +
Sbjct: 16 RSSEQARALKEIRNNGGVPCVLYGGKEVVH------FTVTNEGLRNLV-YTPHIYVVDLV 68
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
D + KV + + + H D L+V F + + ++VP+ G
Sbjct: 69 IDGK------------KVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLEG-- 114
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRS 238
++ G++ GG L R +K +++P + V+++ L + + + G+L + L+LL +
Sbjct: 115 LAEGVKAGGKLALQMRKLKVKALYNVIPEKLTVNVAHLGLGKTVKVGELS-YEGLELLNA 173
Query: 239 KDEPVCKI 246
KD VC +
Sbjct: 174 KDAVVCAV 181
>gi|374340719|ref|YP_005097455.1| 50S ribosomal protein L25 [Marinitoga piezophila KA3]
gi|372102253|gb|AEX86157.1| ribosomal protein L25, Ctc-form [Marinitoga piezophila KA3]
Length = 207
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 14/181 (7%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
+K G +P+IV+ G GGN I+++ + + + + + L + E G
Sbjct: 22 KKEGFIPAIVYGP--GLEGGN---IALKVSSVDAFL--MIEKIEETTPIQLNIEKENGE- 73
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
V + + H +D P+++ F + +++P+ F G+ + GL +GG L
Sbjct: 74 --TYSVTTFLKTLQRHKVSDKPIHIDFYVPSAGHKMHLNIPIEFTGE--AKGLSRGGMLE 129
Query: 191 TIKRTVKF-LCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGG 249
+ + P DIV ++ VD+SELD+ I DL + + +L +E V +
Sbjct: 130 IHYHELPVEILPKDIVEKFV-VDISELDLGDHITVKDLNISEEIDVLLDPEEVVIAVTEP 188
Query: 250 R 250
R
Sbjct: 189 R 189
>gi|322812593|pdb|3PYO|V Chain V, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 50s Subunit Of The First 70s Ribosome.
gi|322812646|pdb|3PYR|V Chain V, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 50s Subunit Of The Second 70s
Ribosome.
gi|322812699|pdb|3PYT|V Chain V, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 50s Subunit Of The First 70s Ribosome.
gi|322812752|pdb|3PYV|V Chain V, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 50s Subunit Of The Second 70s Ribosome
Length = 188
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 139 LPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKF 198
L R+V+L P +V F E + ++ VPL F G G+R GG L I R +
Sbjct: 68 LVRQVNLDKRRRRPEHVDFFVLSDEPV-EMYVPLRFVG--TPAGVRAGGVLQEIHRDILV 124
Query: 199 LCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA 247
+P +I+VD+S L++ + A DLK+ P ++L S +E + +
Sbjct: 125 KVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPGVELAVSPEETIAAVV 173
>gi|154494974|ref|ZP_02033979.1| hypothetical protein PARMER_04020 [Parabacteroides merdae ATCC
43184]
gi|423348327|ref|ZP_17326011.1| 50S ribosomal protein L25 [Parabacteroides merdae CL03T12C32]
gi|423725167|ref|ZP_17699307.1| 50S ribosomal protein L25 [Parabacteroides merdae CL09T00C40]
gi|154085524|gb|EDN84569.1| ribosomal protein L25, Ctc-form [Parabacteroides merdae ATCC 43184]
gi|409214429|gb|EKN07439.1| 50S ribosomal protein L25 [Parabacteroides merdae CL03T12C32]
gi|409234795|gb|EKN27619.1| 50S ribosomal protein L25 [Parabacteroides merdae CL09T00C40]
Length = 194
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 22/188 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
RK +P++++ E H ++ + +R LV + +F +E+ +
Sbjct: 28 RKNNEIPAVLYGGEKVSH------FTITKDSVRNLV-------YSPEIFVVELTIDG--- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
+K + + + TDA L++ FL + ++VP+V G + G++ GG LN
Sbjct: 72 ---KKTMAIVKDIQFQPVTDAILHMDFLEVSENKPVVMEVPVVLEGH--AEGVKAGGKLN 126
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGR 250
R +K +P + +++ L + + + G L L+L+ +K+ VC + R
Sbjct: 127 LQMRKLKVKALYTAIPEKLFINVDHLGLGKTMQVGALHFE-GLELMNAKNAVVCAVQLTR 185
Query: 251 ASDQKKSK 258
A+ ++K
Sbjct: 186 AARGAQAK 193
>gi|229588277|ref|YP_002870396.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
fluorescens SBW25]
gi|259646693|sp|C3KCS0.1|RL25_PSEFS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|229360143|emb|CAY47000.1| putative ribosomal protein L25p family [Pseudomonas fluorescens
SBW25]
Length = 200
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 22/180 (12%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGH 108
D T+ A R G S + R A +P++V+ GGNK +++ + +I KL
Sbjct: 3 DFTLNAQARTDLGKGASRRLRHAANIPAVVY-------GGNKPAESVTILSKEIAKL--- 52
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
S + +L V K V+ + + H ++ F+R L
Sbjct: 53 FENEAAYSHVIELNVDGT--------KQNVIVKAMQRHPSKQFIMHADFVRVVAGQKLTA 104
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
VP+ F G+D +P ++KGG ++ ++ C +P +I+VDLS ++ I DLK
Sbjct: 105 IVPVHFVGED-AP-VKKGGVVSHTATELEVTCLPKDLPEFIEVDLSAAEIGTIIHLSDLK 162
>gi|387891951|ref|YP_006322248.1| 50S ribosomal protein L25 [Pseudomonas fluorescens A506]
gi|423689820|ref|ZP_17664340.1| ribosomal protein L25, Ctc-form [Pseudomonas fluorescens SS101]
gi|387161523|gb|AFJ56722.1| ribosomal protein L25, Ctc-form [Pseudomonas fluorescens A506]
gi|388002328|gb|EIK63657.1| ribosomal protein L25, Ctc-form [Pseudomonas fluorescens SS101]
Length = 199
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 22/178 (12%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLG 110
T+ A R G S + R A +P++V+ GGNK +++ +I KL
Sbjct: 5 TLNAQARTDLGKGASRRLRHAANIPAVVY-------GGNKPAESVTILAKEIAKL---FE 54
Query: 111 RSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDV 170
S + +L V K V+ + + H ++ F+R L V
Sbjct: 55 NEAAYSHVIELNVDGA--------KQNVIVKAMQRHPSKQFIMHADFVRVVAGQKLTAIV 106
Query: 171 PLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
P+ F G++ +P ++KGG ++ + ++ C +P +I+VDLS L++ + DLK
Sbjct: 107 PVHFVGEE-AP-VKKGGEISHVLNEIEVTCLPKDLPEFIEVDLSALEIGAIVHLSDLK 162
>gi|188575471|ref|YP_001912400.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|188519923|gb|ACD57868.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 179
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 88 HGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHS 147
+GG +S+Q N + + F+ S + DL + +GD+ +VL R + H
Sbjct: 2 YGGELEPVSIQLNHEQIWLAQQNEWFY-SSILDLNL-----NGDV---QQVLLRDIQRHP 52
Query: 148 GTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK-RTVKFLCPADIVP 206
+++ F R L VPL F ++ SP + + T + V+ +C +P
Sbjct: 53 FKQLIMHIDFQRVSANQKLSAAVPLHFINEEASPAGKSSEVVVTHELNEVQVVCLPKDLP 112
Query: 207 PYIDVDLSELDVEQKILAGDLKV-----HPALKLLRSKDEPVC 244
+I+VDL L+V I ++K+ P LKL + +D V
Sbjct: 113 EFIEVDLGALEVGNVIHLSEIKLPAGVEIPELKLGKERDVAVV 155
>gi|410100808|ref|ZP_11295764.1| 50S ribosomal protein L25 [Parabacteroides goldsteinii CL02T12C30]
gi|409214089|gb|EKN07100.1| 50S ribosomal protein L25 [Parabacteroides goldsteinii CL02T12C30]
Length = 196
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
RK +P++++ E H +V +RKLV + +F +E+ +
Sbjct: 28 RKNQEIPAVLYGGEKVTH------FTVNVEGVRKLV-------YTPEIFAVELNIDG--- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
+K + + + TDA +++ F+ + I+VP+V G + G++ GG L
Sbjct: 72 ---KKTMAIVKDIQFQPVTDAIMHMDFMEVSDSKPVTIEVPVVLTGH--AEGVKAGGKLT 126
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGR 250
R +K +P + +++ L + + + G L L+L+ +K+ VC + R
Sbjct: 127 LRMRKLKVKAIYTQIPEKLTINVDHLGLGKSMQVGALHFE-GLELMNAKNAVVCAVQLTR 185
Query: 251 AS 252
A+
Sbjct: 186 AA 187
>gi|169825682|ref|YP_001695840.1| 50S ribosomal protein L25 [Lysinibacillus sphaericus C3-41]
gi|226736335|sp|B1HSV6.1|RL25_LYSSC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|168990170|gb|ACA37710.1| 50S ribosomal protein L25 (General stress protein CTC)
[Lysinibacillus sphaericus C3-41]
Length = 198
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 53 TILAIPRASPGTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGR 111
T+L++ + G R ++ + RK G +P++++ + + IS+ + +K + G+
Sbjct: 3 TVLSVTKRETGHRSTLTQLRKGGAIPAVIY-----GYKLDSTPISISAKEFKKSIQKNGQ 57
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
+ S DLE + KV V+ +V S D +V FL L++DVP
Sbjct: 58 NSVFS--LDLEGK----------KVNVVVSEVQQCSLKDEVNHVDFLAINMAEELEVDVP 105
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKF-LCPADIVPPYIDVDLSELDVEQKILAGDLKVH 230
+ G V G+ +GG L +K + PA++ P I+VD+S L V + + +++
Sbjct: 106 IKLIGQSV--GVSEGGILMQPNLELKVKVKPAEL-PDSIEVDISSLKVGESLTVAEIRHQ 162
Query: 231 PALKLLRSKDEPVCKIAGGRASDQ 254
++++ D + I +++Q
Sbjct: 163 TPVEIISEDDYLLVTIVAPVSAEQ 186
>gi|410479144|ref|YP_006766781.1| 50S ribosomal protein L25 [Leptospirillum ferriphilum ML-04]
gi|424867697|ref|ZP_18291477.1| Ribosomal protein L25 [Leptospirillum sp. Group II 'C75']
gi|124514473|gb|EAY55986.1| ribosomal protein L25 [Leptospirillum rubarum]
gi|387221751|gb|EIJ76264.1| Ribosomal protein L25 [Leptospirillum sp. Group II 'C75']
gi|406774396|gb|AFS53821.1| ribosomal protein L25 [Leptospirillum ferriphilum ML-04]
Length = 207
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 15/189 (7%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRK-LVGHLGRSFFVSR 117
R+S G ++ + R AG++P++++ + G +S+ ++K H G
Sbjct: 11 RSSNGKGIARRLRMAGQIPAVLYSR------GKATSLSLNLAHVQKAFHSHAGS----HA 60
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
+F L+V G+ D V L R V T +++ F + L++ VP+ G
Sbjct: 61 IFRLKVT---GTSDGKGSVMALIRDVQRDPLTGRIMHLDFFELSEKDLVRNKVPVEIIG- 116
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
+ G++ GG L R + C +P ++ VD S L + + DL P L++L
Sbjct: 117 ETPAGVKLGGVLEHHVREITVECLPAAMPDHLKVDASSLAMNESFHVRDLPAMPGLRVLD 176
Query: 238 SKDEPVCKI 246
S D + I
Sbjct: 177 SPDTVLVHI 185
>gi|393762743|ref|ZP_10351369.1| large subunit 50S ribosomal protein L25 [Alishewanella agri BL06]
gi|392606365|gb|EIW89250.1| large subunit 50S ribosomal protein L25 [Alishewanella agri BL06]
Length = 201
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R+ G S + R A +VP+I++ GG++ +S+ + + L +
Sbjct: 7 TLNAEVRSDLGKGASRRLRHADKVPAIIY-------GGHQPALSITLDHSKLLKAQSFEA 59
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F+ S + + V E +V+ + + + H L+V F R L VP+
Sbjct: 60 FY-SHILTINVGGE--------EVKAIVKAMQRHPFKPKVLHVDFQRVEAGHELHTTVPV 110
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
F +D + +KGG + V+ C +P +I+VDL+++ V + D+K
Sbjct: 111 HFLNEDAAG--KKGGVVVHGLNEVEITCLPQDLPEFIEVDLADVAVGVTLHLSDIKAPKG 168
Query: 233 LKLLR-----SKDEPVCKIA--GGRASDQKKSK 258
+K ++ D PV + G+A ++ ++
Sbjct: 169 VKFVQLTKGEGHDLPVVSVNKPAGKAEEETAAE 201
>gi|428312219|ref|YP_007123196.1| 50S ribosomal protein L25 [Microcoleus sp. PCC 7113]
gi|428253831|gb|AFZ19790.1| LSU ribosomal protein L25P [Microcoleus sp. PCC 7113]
Length = 199
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 131 DLIEKVRVLPRKVHLHSGTDAPL-NVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYL 189
D+ + L R+V H + + +++F + L++ VPL F G + G++ GG L
Sbjct: 67 DISWNGKALLREVQSHPWKRSQIYHLSFFSVASQDSLEVTVPLHFVGQ--AAGIKSGGIL 124
Query: 190 NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGG 249
+ + ++ C +P IDVD+S L++ + GDL + + + + + + G
Sbjct: 125 DPVITEIQVQCAPGDIPESIDVDVSNLEIGDSLHVGDLILPQGITPMLEPETTIVIVGGY 184
Query: 250 RASDQKKSK 258
Q+ ++
Sbjct: 185 AGGTQEGTE 193
>gi|189501903|ref|YP_001957620.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Amoebophilus asiaticus 5a2]
gi|226736276|sp|B3ERN9.1|RL25_AMOA5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189497344|gb|ACE05891.1| hypothetical protein Aasi_0482 [Candidatus Amoebophilus asiaticus
5a2]
Length = 196
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 22/198 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
I+ RA+ G + S + R +VP +++ GG +++ I K + + +++
Sbjct: 6 IIGYRRANLGKQASKQLRNDAQVPGVLY-------GGKEQVHFYTPMAILKDLVYTPQAY 58
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
FV+ + + + + + + H + L++ L+ + +K+D+P+V
Sbjct: 59 FVTLNLEGAIYN------------CILQDIQFHPVNEVILHIDLLQIFEDKQIKMDIPIV 106
Query: 174 FRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
GD +PG+ KGG L K+ + + +P I VD+S LDV Q +K
Sbjct: 107 LVGD--APGVVKGGNLVHKKKKLSVVAYPKDMPDTIPVDISGLDVGQMTRVSHIKAE-NY 163
Query: 234 KLLRSKDEPVCKIAGGRA 251
+L PV + RA
Sbjct: 164 TILAVPGTPVAVVETTRA 181
>gi|146283515|ref|YP_001173668.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri A1501]
gi|166223708|sp|A4VPC5.1|RL25_PSEU5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|145571720|gb|ABP80826.1| probable ribosomal protein L25 [Pseudomonas stutzeri A1501]
Length = 205
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 24/194 (12%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFG 128
R A VP++++ GGN + IS+ KL L S + +L V +
Sbjct: 24 RNAALVPAVIY-------GGNNAPQSISILAKDFAKL---LENEASFSHVLNLNVDGQNE 73
Query: 129 SGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRK-GG 187
S VL + + H L+ F+R L VPL F + S G++K GG
Sbjct: 74 S--------VLIKALQRHPAKGFVLHADFVRVVAGHKLTATVPLHFINQETSVGVKKQGG 125
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL---RSKDEPVC 244
+ V+ C +P +I+VD++ ++V Q + D+K+ ++L+ D PV
Sbjct: 126 EILHNLNEVEVSCMPQDLPEFIEVDMANVEVGQVLHMTDIKLPKGVELVALAHGSDLPVA 185
Query: 245 KIAGGRASDQKKSK 258
+ R S + K
Sbjct: 186 NVHAPRVSKEDAPK 199
>gi|399543897|ref|YP_006557205.1| 50S ribosomal protein L25 [Marinobacter sp. BSs20148]
gi|399159229|gb|AFP29792.1| 50S ribosomal protein L25 [Marinobacter sp. BSs20148]
Length = 209
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 27/205 (13%)
Query: 51 DETILAIPRASPGTRVSVKERKAGR-VPSIVFEQEDGQHGGNKRL--ISVQTNQIRKLVG 107
D I A PR G S + R+ R +P+I++ GG+K IS+ N+++K
Sbjct: 4 DFVIEAFPRDDQGRGASRRLRREERKIPAIIY-------GGHKEAVPISIWHNELKKA-- 54
Query: 108 HLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLK 167
L F SR+ +E+ + K V+ + + H + F R + +
Sbjct: 55 -LENEAFYSRVLTIELNGK--------KESVILKDLQRHPYKPLLSHADFQRINKDEEIF 105
Query: 168 IDVPLVFRGDDVSPGLRK-GGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGD 226
+ VPL ++ +P ++ GG + V+ C +P +I++DL +++++ + D
Sbjct: 106 VHVPLHLVNEETAPAIKTFGGVAFRLMTQVEVACLPQNLPEFIEIDLFDVEMDGIVHMSD 165
Query: 227 LKVH-----PALKLLRSKDEPVCKI 246
LK+ PAL+ D+ + I
Sbjct: 166 LKLPEGVRIPALQHGAEHDQAIVTI 190
>gi|206901159|ref|YP_002250500.1| 50S ribosomal protein L25/general stress protein Ctc [Dictyoglomus
thermophilum H-6-12]
gi|226736310|sp|B5YD92.1|RL25_DICT6 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|206740262|gb|ACI19320.1| ribosomal protein L25, Ctc-form [Dictyoglomus thermophilum H-6-12]
Length = 207
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLV--GHLGRSFFVS 116
R G + + K R++ +P +V+ G H + V+ + L+ GH + +
Sbjct: 11 RDKIGKQYAKKYRRSNLIPGVVY----GAHLKENIHVLVEKKDLWNLIKKGH-SKEQHIL 65
Query: 117 RLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRG 176
RL + + +++ +++ P K D L+V F E ++ + VP+V G
Sbjct: 66 RLIIEDGENTITENAILQDIQIDPIK-------DDLLHVDFHAVSLEEVVDVYVPVVLVG 118
Query: 177 DDVSPGLRKGGYL-NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKL 235
+ S G+++GG L + ++ + P D VPP+I+VD+++L++ I GDL + +K+
Sbjct: 119 E--SKGVKQGGILQHGVEEILIRALPLD-VPPHIEVDITDLEIGDSITVGDLNLPENIKV 175
Query: 236 LRSKDEPVCKI 246
L DE + I
Sbjct: 176 LTPADEVIVNI 186
>gi|121603807|ref|YP_981136.1| 50S ribosomal protein L25/general stress protein Ctc [Polaromonas
naphthalenivorans CJ2]
gi|166223703|sp|A1VKN7.1|RL25_POLNA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|120592776|gb|ABM36215.1| LSU ribosomal protein L25P [Polaromonas naphthalenivorans CJ2]
Length = 218
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 54 ILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSF 113
+A RA GT S + R GR P IV+ GG I ++ + L + +
Sbjct: 3 FVAFERAKQGTGASRRLRITGRTPGIVY-------GGTAEPILIEIDH-NALWHAIKKEA 54
Query: 114 FVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLV 173
F + ++E+ + +VL R + +H ++ F R + + VP+
Sbjct: 55 FHGSILEMELGGT--------EHKVLLRDLQMHPYKQQVQHIDFQRVEARTRMTVKVPVH 106
Query: 174 FRGDDVSPGLRKGGYLNT-IKRTVKFLC-PADIVPPYIDVDLSEL 216
F G++ SP ++ L T + + C PADI P +I VDL L
Sbjct: 107 FSGEEESPAVKTENCLVTHVLTEMTVSCFPADI-PDFIAVDLGGL 150
>gi|357060219|ref|ZP_09120992.1| 50S ribosomal protein L25 [Alloprevotella rava F0323]
gi|355376491|gb|EHG23735.1| 50S ribosomal protein L25 [Alloprevotella rava F0323]
Length = 202
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 86/193 (44%), Gaps = 17/193 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSR 117
RA G + + R+ G VP ++ Q+ +G + ++ + KL+ F
Sbjct: 11 RADLGKKATKAARREGLVPCNLYGQQKDANGNAVAIAFTISEKEANKLI-------FTPH 63
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
++ ++++ + E + + R+ H D L++ FL E + I VP+ +G
Sbjct: 64 IYLIDIKIDG------EDHKAILREAQFHPVKDNILHLDFLEVHEERPIVIGVPIQTKG- 116
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
++ G+R GG L T+ R + +P + +D++ L + + I G+L L+L+
Sbjct: 117 -LAEGVRAGGRLTTLIRKINVKALYQDIPEKLVIDVTNLQLGKSIKVGELSFDK-LELVT 174
Query: 238 SKDEPVCKIAGGR 250
KD V + R
Sbjct: 175 PKDVNVVSVKMTR 187
>gi|418324782|ref|ZP_12936008.1| ribosomal protein L25, Ctc-form [Staphylococcus pettenkoferi
VCU012]
gi|365224105|gb|EHM65372.1| ribosomal protein L25, Ctc-form [Staphylococcus pettenkoferi
VCU012]
Length = 220
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 56 AIPRASPGTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIR--KLVGHLGRS 112
+I R TR +K R +G+VPS+V+ G + +SV+ +++ K++ +GR+
Sbjct: 6 SIIRQGKQTRSELKALRNSGKVPSVVY-------GYGTKNVSVKVDEVEFIKVIREVGRN 58
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
+ DL V S+ ++V+ + ++ FL ++VP+
Sbjct: 59 ----GVIDLGVGSK--------TIKVMVSDYQFDPLKNKITHIDFLAINMSEERTVEVPV 106
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPA 232
G+ V G ++GG + ++ + +P YI+VD+SEL++ I DLK
Sbjct: 107 HLVGEAV--GAKEGGVVEQPLFDLEVTATPENIPEYIEVDISELNINDSISVEDLKTKGD 164
Query: 233 LKLLRSKDEPVCKIA 247
+ +++ V +
Sbjct: 165 FTIENDENDSVVTVV 179
>gi|259415376|ref|ZP_05739297.1| ribosomal protein L25, Ctc-form [Silicibacter sp. TrichCH4B]
gi|259348606|gb|EEW60368.1| ribosomal protein L25, Ctc-form [Silicibacter sp. TrichCH4B]
Length = 209
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G + R+A VP +VF GG+ +++Q L+ L F S L
Sbjct: 13 RAGTGKGAARAARRAHMVPGVVF-------GGDADPLAIQI-PYNVLLKRLKAGRFKSTL 64
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
F+L+V + VRV+ R V D P + +R + + + +P+ F ++
Sbjct: 65 FNLKVEGH-------DDVRVICRDVQRDVVKDLPTHFDLMRLRRTSKINLFIPVEFINEE 117
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
GL++GG L ++ V+ + A +P + VDL+
Sbjct: 118 ECVGLKRGGVLTVVRAEVELIVTAGDIPEKLTVDLT 153
>gi|258513562|ref|YP_003189784.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfotomaculum acetoxidans DSM 771]
gi|257777267|gb|ACV61161.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfotomaculum acetoxidans DSM 771]
Length = 219
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 89/193 (46%), Gaps = 17/193 (8%)
Query: 56 AIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLV-GHLGRSFF 114
A PR G S K G +P++++ + G + + ++ + ++ GR+
Sbjct: 14 AYPREGCGKGYSNKLFSKGYMPAVLYSKSIGS-----KPLELEARALEDVLKSKTGRN-- 66
Query: 115 VSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVF 174
+ DL ++S GD + +V+ + + H + L+ FL ++I +V
Sbjct: 67 --SVIDLHLKS----GDGEDSYKVMVKDLQYHPIRRSYLHADFLEISLTDRVQIAAKVVL 120
Query: 175 RGDDVSPGL-RKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL 233
G+ +PG+ +GG L+ I R V C +P I VD+S+L + + DL+ P +
Sbjct: 121 VGE--APGVAEEGGILDQIIREVGVKCLPGSIPDIITVDVSKLYIGDSVAVMDLQAGPDI 178
Query: 234 KLLRSKDEPVCKI 246
++L +D V ++
Sbjct: 179 EILADEDLVVARV 191
>gi|333893689|ref|YP_004467564.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas
sp. SN2]
gi|332993707|gb|AEF03762.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas
sp. SN2]
Length = 210
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 16/175 (9%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
T+ A R G S + R+ ++P I++ GG + +S+ + K+
Sbjct: 7 TLDATVRTDLGKGASRRLRREDKLPGIIY-------GGEEAPVSITLDH-NKVNNAADFE 58
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
F S + L V + V VL + + H+ L+V F R L +VPL
Sbjct: 59 AFYSHVLTLNVDGK--------AVEVLVKDMQRHAFKPRILHVDFQRVIAGQELHTNVPL 110
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
F +D S ++ GG ++ C +P +I+VD++ ++++ + DL
Sbjct: 111 HFINEDKSAAIKAGGIAEHHVNEIEITCLPKDLPEFIEVDIANVEMDSTLHLSDL 165
>gi|148265701|ref|YP_001232407.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter
uraniireducens Rf4]
gi|189042359|sp|A5G7R6.1|RL25_GEOUR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|146399201|gb|ABQ27834.1| LSU ribosomal protein L25P [Geobacter uraniireducens Rf4]
Length = 194
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 166 LKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAG 225
+++ VP+ G V G+++GG L+ ++ C +P +IDVD++EL + + G
Sbjct: 104 VRVKVPVNLVGSAV--GVKEGGLLDFAMHEIEIECFPTHIPEHIDVDVTELTIGHSLHIG 161
Query: 226 DLKVHPALKLLRSKDEPVCKIAG 248
D+K P +K+L V I G
Sbjct: 162 DIKELPGIKVLGDATVSVVSILG 184
>gi|410664410|ref|YP_006916781.1| 50S ribosomal protein L25/general stress protein Ctc [Simiduia
agarivorans SA1 = DSM 21679]
gi|409026767|gb|AFU99051.1| 50S ribosomal protein L25/general stress protein Ctc [Simiduia
agarivorans SA1 = DSM 21679]
Length = 210
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 22/181 (12%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R AG+VP+I++ GG ++Q + + LV HL F S + L V +
Sbjct: 25 RLAGKVPAIIY-------GGKSEPQNIQISH-KDLVHHLENEAFYSHIISLVVDGKAED- 75
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYL- 189
V+ + + H L+ F R +K+ VPL F + + G+++GG +
Sbjct: 76 -------VILKDLQRHPAKPVILHADFQRVVKGQKMKVSVPLHFINEASAKGVKQGGGIV 128
Query: 190 -NTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPAL---KLLRSKDEPVCK 245
+ + + P D+ P +I+VD++ L++ + ++ + AL +L D PV
Sbjct: 129 SHLVSELEVNVLPKDL-PEFIEVDVANLELGATLHISEINLPKALESVELAHGHDLPVVT 187
Query: 246 I 246
I
Sbjct: 188 I 188
>gi|218262818|ref|ZP_03477176.1| hypothetical protein PRABACTJOHN_02856 [Parabacteroides johnsonii
DSM 18315]
gi|423341865|ref|ZP_17319580.1| 50S ribosomal protein L25 [Parabacteroides johnsonii CL02T12C29]
gi|218223113|gb|EEC95763.1| hypothetical protein PRABACTJOHN_02856 [Parabacteroides johnsonii
DSM 18315]
gi|409219958|gb|EKN12917.1| 50S ribosomal protein L25 [Parabacteroides johnsonii CL02T12C29]
Length = 194
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 22/188 (11%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
RK +P++++ E H ++ + +R LV + +F +E+ +
Sbjct: 28 RKNNEIPAVLYGGEKVSH------FTITKDSVRNLV-------YSPEIFVVELAIDG--- 71
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
+K + + + TDA L++ FL + ++VP+V G + G++ GG LN
Sbjct: 72 ---KKTMAIVKDIQFQPVTDAILHMDFLEVSDNKPVVMEVPVVLEGH--AEGVKAGGKLN 126
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGR 250
R +K +P + +++ L + + + G L L+L+ +K+ VC + R
Sbjct: 127 LQMRKLKVKALYTAIPEKLFINVDHLGLGKTMQVGALHFE-GLELMNAKNAVVCAVQLTR 185
Query: 251 ASDQKKSK 258
A+ ++K
Sbjct: 186 AARGAQAK 193
>gi|313145682|ref|ZP_07807875.1| 50S ribosomal protein L25 [Bacteroides fragilis 3_1_12]
gi|313134449|gb|EFR51809.1| 50S ribosomal protein L25 [Bacteroides fragilis 3_1_12]
Length = 196
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 131 DLI---EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
DLI +KV + + + H D L+V F + + ++VP+ G ++ G++ GG
Sbjct: 66 DLIIDGKKVNAILKDIQFHPVKDTILHVDFYQIDEAKPIVMEVPVQLEG--LAEGVKAGG 123
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKI 246
L R +K +++P + V++S L + + + G+L + L+LL +K+ VC +
Sbjct: 124 KLALQMRKLKVKALYNVIPEKLTVNVSHLGLGKTVKVGELS-YEGLELLNAKEAVVCAV 181
>gi|206895312|ref|YP_002247107.1| 50S ribosomal protein L25 [Coprothermobacter proteolyticus DSM
5265]
gi|206737929|gb|ACI17007.1| ribosomal protein L25, Ctc-form [Coprothermobacter proteolyticus
DSM 5265]
Length = 211
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 63 GTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLE 122
GTR K RK G VP++++ GQ L+ ++ IR+ V LGRS +L+
Sbjct: 14 GTRKVKKIRKNGYVPAVLY----GQDMEATPLLLERSQVIRERV-TLGRSL------ELD 62
Query: 123 VRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPG 182
V + VRV+ ++ + + +++ F + + + +P+V G+ V G
Sbjct: 63 VDGKI--------VRVIVKEEQVDPISQEVIHLDFQALSAGSTVTVSIPIVLVGEPV--G 112
Query: 183 LRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL 236
++KGG L R ++ P + + + VD+S +D+ I G+L + P K+
Sbjct: 113 IKKGGILEFPTREIEVELPTEKLVEQVTVDVSNMDIGDIIHIGELDLPPEAKIF 166
>gi|297565117|ref|YP_003684089.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus
silvanus DSM 9946]
gi|296849566|gb|ADH62581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus
silvanus DSM 9946]
Length = 205
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 138 VLPRKVHLHSGTDAPLNVTF--LRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRT 195
VL R+V+L P +V F L P A+ VPL F G G+R GG ++T+ R
Sbjct: 68 VLVRQVNLDKRKRRPSHVDFYALSDEPVAMY---VPLKFVG--TPQGVRLGGVMDTVLRD 122
Query: 196 VKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIA 247
++ +P +I+VD+S L + + DLK+ P +KL D V I
Sbjct: 123 IEVKVSPRNIPDFIEVDVSGLGIGDSLHLSDLKLPPGVKLNMKGDSTVVTIV 174
>gi|424864508|ref|ZP_18288411.1| ribosomal protein L25, Ctc-form [SAR86 cluster bacterium SAR86B]
gi|400759254|gb|EJP73436.1| ribosomal protein L25, Ctc-form [SAR86 cluster bacterium SAR86B]
Length = 235
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 153 LNVTFLRAPPEALLKIDVPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDV 211
L+ FLR + LK+ +P F +D G++ +GG ++ R ++ LC A +P I+V
Sbjct: 91 LHADFLRVSRKTKLKVVIPFTFLNEDDCEGVKTEGGVISKATREIEILCSAGDIPESIEV 150
Query: 212 DLSELDVEQKILAGDLKV 229
D++ L + I DL +
Sbjct: 151 DVTSLMIGDAIRLTDLNL 168
>gi|26987457|ref|NP_742882.1| 50S ribosomal protein L25 [Pseudomonas putida KT2440]
gi|24982120|gb|AAN66346.1|AE016263_3 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
putida KT2440]
Length = 217
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 22/191 (11%)
Query: 40 LDGLPRPDPRYDETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISV 97
L GL + + T+ A R G S + R + +P++V+ GGN+ + +++
Sbjct: 12 LGGLLWRNKMTEFTLNAQARTDLGKGASRRLRHSANIPAVVY-------GGNQDAQSLTI 64
Query: 98 QTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTF 157
+I KL S + +L V K V+ + + H ++ F
Sbjct: 65 LAKEITKL---FENEAAFSHVLELNVDGA--------KQNVVVKALQRHPAKGFIMHADF 113
Query: 158 LRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELD 217
+R L VP+ F ++ ++KGG ++ ++ ++ C A +P +I+VDL+ +
Sbjct: 114 VRVVAGQKLTAKVPVHFINEEAP--VKKGGEISHVESEIEVSCEAKDLPEFIEVDLANAE 171
Query: 218 VEQKILAGDLK 228
+ I DLK
Sbjct: 172 IGTIIHLSDLK 182
>gi|336171899|ref|YP_004579037.1| 50S ribosomal protein L25 [Lacinutrix sp. 5H-3-7-4]
gi|334726471|gb|AEH00609.1| 50S ribosomal protein L25 [Lacinutrix sp. 5H-3-7-4]
Length = 210
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 20/176 (11%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRS 112
TI R S G + + R AG+VP +++ GG+K + L S
Sbjct: 5 TINGSQRESVGKKSTKALRNAGQVPCVLY-------GGDK--------AVHFSAAELAFS 49
Query: 113 FFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPL 172
V V E GD + + + H TD L++ F + + + +D+P+
Sbjct: 50 KLVYTPNAHTVVIELEGGDTYNAIL---QDIQFHPVTDRILHIDFYQVFEDKEITMDIPV 106
Query: 173 VFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
+ G+ G+R GG L KR+++ +P YID D+ L + K+ L+
Sbjct: 107 RYIGN--PRGVRNGGVLRKNKRSLRVKALPGNLPDYIDADIENLKIGNKLYITKLE 160
>gi|110597921|ref|ZP_01386203.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobium
ferrooxidans DSM 13031]
gi|110340498|gb|EAT58984.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobium
ferrooxidans DSM 13031]
Length = 199
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 23/185 (12%)
Query: 69 KERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEF 127
K RK G VP++++ H G + + +SV ++KLV H S + DL+ F
Sbjct: 20 KLRKNGIVPAVIY------HKGEETIPVSVNEIALKKLV-HSAES----HIIDLQ----F 64
Query: 128 GSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGG 187
G + R ++V H TD ++ F + +++++VP+ GD + G+ KGG
Sbjct: 65 PDGRI---KRSFIKQVQFHPVTDRIIHTDFQLFAADEVIELEVPVSVTGDSI--GVEKGG 119
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGD--LKVHPALKLLRSKDEPVCK 245
L I+ + + +P ++ VD++ L++ I + + + L + D PV
Sbjct: 120 RLQIIRHALTIKGKPEDMPDHLIVDVTALEIGHSIHVREIPMTAYAGLVISDDPDTPVIT 179
Query: 246 IAGGR 250
+ +
Sbjct: 180 VLASK 184
>gi|160872526|ref|ZP_02062658.1| ribosomal protein L25, Ctc-form [Rickettsiella grylli]
gi|159121325|gb|EDP46663.1| ribosomal protein L25, Ctc-form [Rickettsiella grylli]
Length = 237
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFG 128
R RVP+I++ G ++ IS++ NQ+ + L F S + + +
Sbjct: 28 RLENRVPAILY-------GASEPPLPISLEHNQVLRA---LENEAFYSHILTINIEG--- 74
Query: 129 SGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLR-KGG 187
E+ VL + + H+ L++ R + + + VPL F+G+ +PG++ +GG
Sbjct: 75 ----TEQKAVL-KDLQRHAYKPYILHMDLQRVSAKEKITMSVPLHFKGETEAPGVKDEGG 129
Query: 188 YLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLL----RSKDEPV 243
L + +V+ C +P Y++VD+S+L +++ I L + ++L +D P+
Sbjct: 130 VLTKLLTSVEVRCLPVSLPEYLEVDVSKLRLDESISLSQLHLPEGVELTAAISHEEDRPL 189
Query: 244 CKIAGGRA 251
I RA
Sbjct: 190 VNIHIPRA 197
>gi|99080057|ref|YP_612211.1| 50S ribosomal protein L25 [Ruegeria sp. TM1040]
gi|123379135|sp|Q1GK67.1|RL25_SILST RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|99036337|gb|ABF62949.1| LSU ribosomal protein L25P [Ruegeria sp. TM1040]
Length = 209
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRL 118
RA G + R+A VP +VF GG+ +++Q L+ L F S L
Sbjct: 13 RAGTGKGAARAARRANLVPGVVF-------GGDADPLAIQI-PYNVLLKRLKAGRFKSTL 64
Query: 119 FDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDD 178
F+L+V + VRV+ R V D P + +R + + + +P+ F ++
Sbjct: 65 FNLKVEGH-------DDVRVICRDVQRDVVKDLPTHFDLMRLRRTSKINLFIPVEFINEE 117
Query: 179 VSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLS 214
GL++GG L ++ V+ + A +P + VDL+
Sbjct: 118 ECVGLKRGGVLTVVRAEVELVVTAGDIPEKLTVDLT 153
>gi|227537439|ref|ZP_03967488.1| stress induced RNA binding ribosomal protein L25p family protein
[Sphingobacterium spiritivorum ATCC 33300]
gi|227242713|gb|EEI92728.1| stress induced RNA binding ribosomal protein L25p family protein
[Sphingobacterium spiritivorum ATCC 33300]
Length = 198
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 134 EKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIK 193
+K + + + H TD +++ FL + + +++P+ G SPG++ GG L
Sbjct: 67 KKSKAIVQDAQFHPLTDLVIHIDFLELSDDKEVSVNIPVTLTG--TSPGVKMGGKLVQKL 124
Query: 194 RTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRA 251
RT++ + +P I+V + L+V + + +++ A K+L + D+ + + RA
Sbjct: 125 RTLRVKATPNNLPQSIEVPMESLEVGKSVRVAQVQLKDA-KILNNSDDTIVSVVMSRA 181
>gi|403253524|ref|ZP_10919825.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga
sp. EMP]
gi|402811058|gb|EJX25546.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga
sp. EMP]
Length = 215
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 166 LKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAG 225
++I+VPL G V G+ KGG+L + D VP I+VD+S LD+ I A
Sbjct: 105 MRINVPLKVVGKPV--GVEKGGFLEVFHEEIPVETDPDKVPQEIEVDVSSLDLGDVIHAK 162
Query: 226 DLKVHPALKLLRSKDEPVCKI 246
DLK+ +K L ++E V +
Sbjct: 163 DLKLPEGVKCLLEEEEAVVSV 183
>gi|332877495|ref|ZP_08445242.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357046622|ref|ZP_09108242.1| ribosomal protein L25, Ctc-form [Paraprevotella clara YIT 11840]
gi|332684601|gb|EGJ57451.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355530424|gb|EHG99836.1| ribosomal protein L25, Ctc-form [Paraprevotella clara YIT 11840]
Length = 197
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 59 RASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGRSFFVSR 117
RA+ G + + + RKA VP ++ + ++G L +V +++R L+ +
Sbjct: 11 RAAFGKKAAREIRKANAVPCNLYGEAKDENGAPVALPFTVTNDELRNLI-------YSPD 63
Query: 118 LFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGD 177
++ + + + ++ + + +++ H D L+V F + ++VP+ G
Sbjct: 64 IYAVNLNIDG------KECKAILKEIQFHPVKDNVLHVDFYEITDTKPIVMEVPIKLNG- 116
Query: 178 DVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLR 237
++ G++ GG L R +K +P +++D++ L + + I G+L L+L+
Sbjct: 117 -LAEGVKAGGRLAASVRKLKVKAVYTNIPERLNIDVTSLGLGKTIKVGELHFE-GLELVT 174
Query: 238 SKDEPVCKIAGGRAS 252
SK+ VC++ R +
Sbjct: 175 SKEVVVCQVKMTRGA 189
>gi|254787718|ref|YP_003075147.1| 50S ribosomal protein L25/general stress protein Ctc
[Teredinibacter turnerae T7901]
gi|237686716|gb|ACR13980.1| ribosomal protein L25/general stress protein Ctc [Teredinibacter
turnerae T7901]
Length = 209
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 21/182 (11%)
Query: 51 DETILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNK--RLISVQTNQIRKLVGH 108
D T+ A R G S + R VP+IV+ GG K + I++ N+ V H
Sbjct: 5 DFTLNAKARDDQGKGASRRLRHDNLVPAIVY-------GGEKDPQNIAIAQNE---FVKH 54
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
L F S + L V E K V+ + + H L+ FLR L
Sbjct: 55 LENEAFYSHIVTLVVDGE--------KQDVILKDLQRHPAKAQLLHADFLRVSRTQKLTT 106
Query: 169 DVPLVFRGDDVSPGLR-KGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDL 227
VPL F ++ G++ +GG + ++ C +P +I+VDL + +V + DL
Sbjct: 107 RVPLHFINEESCKGVKLQGGVVAHSLTELEISCLPQDLPEFIEVDLKDAEVGHIVHISDL 166
Query: 228 KV 229
+
Sbjct: 167 NL 168
>gi|383449437|ref|YP_005356158.1| 50S ribosomal protein L25 [Flavobacterium indicum GPTSA100-9]
gi|380501059|emb|CCG52101.1| 50S ribosomal protein L25 [Flavobacterium indicum GPTSA100-9]
Length = 201
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 26/200 (13%)
Query: 53 TILAIPRASPGTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGR 111
TI R S G +VS K R AG VP +++ ++ H S + KLV
Sbjct: 5 TIKGSERESVG-KVSTKALRNAGMVPCVLYGGQNPVH------FSAEEKSFSKLV----- 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
+ +E+ + G +K + + + H +D +++ F + ++VP
Sbjct: 53 --YTPEAHTVEI--DLGG----KKFNGILQDIQFHPVSDKIMHIDFYELDAAKEVTMEVP 104
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKF-LCPADIVPPYIDVDLSELDVEQKILAGDLKVH 230
+ F G+ S G+ GG L +R +K PA++ P +++ D++ LD+ K+ L V+
Sbjct: 105 VKFVGN--SKGVMAGGDLQVNQRKLKVRALPANL-PDFVEADITPLDMGNKLYVTSLPVN 161
Query: 231 PALKLLRSKDEPVCKIAGGR 250
K+L + VCK+ R
Sbjct: 162 -NFKILHPDNTVVCKVKISR 180
>gi|126653272|ref|ZP_01725383.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp.
B14905]
gi|126589946|gb|EAZ84075.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp.
B14905]
Length = 198
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 53 TILAIPRASPGTRVSVKE-RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGR 111
T+L++ + G R ++ + RK G +P++++ + + IS+ + +K + G+
Sbjct: 3 TVLSVTKRETGHRSTLTQLRKGGAIPAVIY-----GYKLDSTPISISAKEFKKSIQKNGQ 57
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
+ S DLE + KV V+ +V S D +V FL L+ DVP
Sbjct: 58 NSVFS--LDLEGK----------KVNVVVSEVQQCSLKDEVNHVDFLAINMAEELEADVP 105
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKF-LCPADIVPPYIDVDLSELDVEQKILAGDLKVH 230
+ G V G+ +GG L +K + PA++ P I+VD+S L V + + +++
Sbjct: 106 IKLVGQSV--GVSEGGILMQPNLELKVKVKPAEL-PDSIEVDISSLKVGESLTVAEIRNQ 162
Query: 231 PALKLLRSKDEPVCKIAGGRASDQKK 256
++++ D + I +++Q++
Sbjct: 163 TPVEVISEDDYLLVTIVAPVSAEQEE 188
>gi|147676447|ref|YP_001210662.1| 50S ribosomal protein L25/general stress protein Ctc [Pelotomaculum
thermopropionicum SI]
gi|226736346|sp|A5D632.1|RL25_PELTS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|146272544|dbj|BAF58293.1| ribosomal protein L25 [Pelotomaculum thermopropionicum SI]
Length = 209
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 15/179 (8%)
Query: 71 RKAGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVGHLGRSFFVSRLFDLEVRSEFGSG 130
R+ G +P++V+ + G I+V +++K++ G + + R +
Sbjct: 22 REKGMIPAVVYGKNVGSLS-----IAVDAGELQKILEGAGSNALI--------RMKIKEN 68
Query: 131 DLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLN 190
I K VL ++V ++ F + + + VP+ G + G +GG L
Sbjct: 69 GKIRKHNVLVKEVQRDPVRRELIHADFHQVSLKDRVHATVPVHLTGS--AAGTVEGGVLT 126
Query: 191 TIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGG 249
+ R V+ C A +P I VD+S L + I DL + P ++ L + PV + G
Sbjct: 127 PLLRRVEMECLASEIPEAITVDVSGLRIGDTITVADLPLPPGVRALEDPEAPVVTVTAG 185
>gi|305665462|ref|YP_003861749.1| putative ribosomal L25p family stress protein [Maribacter sp.
HTCC2170]
gi|88710218|gb|EAR02450.1| putative ribosomal L25p family stress protein [Maribacter sp.
HTCC2170]
Length = 219
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 28/186 (15%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL-ISVQTNQIRKLVGHLGR 111
TI R S G + + R AG+VP +V+ GG K L S + LV
Sbjct: 5 TIKGSERESVGKKATKALRNAGKVPCVVY-------GGEKPLHFSANELAFKNLV----- 52
Query: 112 SFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKIDVP 171
+ + + V E G +KV + + + H TD +++ F + + + +++P
Sbjct: 53 --YTANAHTVVVELENG-----DKVNAVMQDIQFHPVTDKIIHIDFYQLFKDKEVTMNIP 105
Query: 172 LVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI-----LAGD 226
+ G+ SPG+R GG L KR + + + + VD+S L + I L+ D
Sbjct: 106 VRLEGN--SPGVRNGGRLLFRKRKLTIKAFPENLIDFFKVDISTLKIGDNISVESLLSND 163
Query: 227 LKV-HP 231
+ HP
Sbjct: 164 FSILHP 169
>gi|409198032|ref|ZP_11226695.1| 50S ribosomal protein L25/general stress protein Ctc [Marinilabilia
salmonicolor JCM 21150]
Length = 191
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 143 VHLHSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPA 202
V H TD L+V FL+ + + I++P+ +G ++ G++ GG L KR +K A
Sbjct: 76 VQYHPVTDDALHVDFLQVFEDKPVVIEIPVKTKG--LAAGVKAGGKLTIEKRKLKVKGLA 133
Query: 203 DIVPPYIDVDLSELDVEQKILAGDLKVHPALKLLRSKDEPVCKIAGGRAS 252
+P +++D+++L + + + G+L L+LL +K++ V + RA+
Sbjct: 134 KDLPTLLEIDIAKLGLGKGLKVGELDFEN-LELLNNKNQVVVSVKLTRAA 182
>gi|332878587|ref|ZP_08446307.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332683488|gb|EGJ56365.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 198
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 30/202 (14%)
Query: 53 TILAIPRASPGTRVSVKERKAGRVPSIVFEQEDGQHGGNKRL----ISVQTNQIRKLVGH 108
TI R S G S R AG+VP +++ +D H L I N +
Sbjct: 5 TIKGSQRESVGKAASKALRNAGQVPCVLYGGDDVLHFSAPELAFAGIVYTPNVYTATIEV 64
Query: 109 LGRSFFVSRLFDLEVRSEFGSGDLIEKVRVLPRKVHLHSGTDAPLNVTFLRAPPEALLKI 168
G+S+ + + + TD +++ F + + I
Sbjct: 65 NGKSY-----------------------TAILQDIQFDPVTDKIIHIDFYQLNKNKEITI 101
Query: 169 DVPLVFRGDDVSPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLK 228
+VP+ +G SPG+ GG L + R +K D +P +I VD+S L++ ++ L
Sbjct: 102 EVPIQIQG--TSPGVMAGGTLRVVNRKLKIKALPDNLPDFIPVDISALEMGNRLYITKLP 159
Query: 229 VHPALKLLRSKDEPVCKIAGGR 250
K++ + VC+I R
Sbjct: 160 -QENYKIMHPDNTVVCQIRVSR 180
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.139 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,177,482,533
Number of Sequences: 23463169
Number of extensions: 181450181
Number of successful extensions: 365075
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 911
Number of HSP's that attempted gapping in prelim test: 363574
Number of HSP's gapped (non-prelim): 1623
length of query: 258
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 119
effective length of database: 9,097,814,876
effective search space: 1082639970244
effective search space used: 1082639970244
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)