Query 025092
Match_columns 258
No_of_seqs 190 out of 312
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 03:34:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025092.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025092hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v2b_A 23-kDa polypeptide of p 100.0 1.6E-50 5.6E-55 346.3 13.0 172 86-258 1-177 (177)
2 2xb3_A PSBP protein; photosynt 100.0 3.4E-36 1.2E-40 253.2 15.2 151 90-257 4-164 (165)
3 2lnj_A SLL1418 protein, putati 100.0 5.9E-37 2E-41 259.9 0.0 151 91-257 11-169 (170)
4 1tu1_A Hypothetical protein PA 97.7 0.00084 2.9E-08 54.7 13.1 137 95-258 4-142 (148)
5 3lyd_A Uncharacterized protein 93.2 2.3 7.8E-05 35.2 13.2 132 99-257 17-157 (161)
6 3hlz_A Uncharacterized protein 40.6 28 0.00096 30.5 4.3 39 99-140 11-49 (269)
7 2pq4_B Periplasmic nitrate red 27.4 32 0.0011 21.0 1.8 12 52-63 3-14 (35)
8 1ywi_A Formin-binding protein 25.9 38 0.0013 21.1 2.0 21 222-242 18-38 (41)
9 2ysi_A Transcription elongatio 23.9 23 0.0008 22.0 0.7 21 223-243 17-37 (40)
10 1e0l_A Formin binding protein; 20.3 27 0.00093 21.2 0.5 21 223-243 13-33 (37)
No 1
>1v2b_A 23-kDa polypeptide of photosystem II oxygen- evolving complex; alpha-beta, riken structural genomics/proteomics initiative, RSGI; HET: GLC; 1.60A {Nicotiana tabacum} SCOP: d.107.1.2
Probab=100.00 E-value=1.6e-50 Score=346.26 Aligned_cols=172 Identities=78% Similarity=1.251 Sum_probs=138.7
Q ss_pred CCCCCCCCceeccCCceEEecCCCCccCccccCCCceEEeecCCCCCCcEEEEEecCCCCccccCCChHHHHHHHHHHHH
Q 025092 86 GKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLG 165 (258)
Q Consensus 86 ~~p~~~~~f~~y~~dgYsf~yP~~W~~~~e~~~~G~dv~f~d~~~~~~nVsV~v~p~~~~sI~d~Gspeeva~~v~~~L~ 165 (258)
|+||.++||++|.+|||+|+||++|+++++.+++|++++|+|+++.++||+|+|+|+++++|+|||+|++||++|+++|+
T Consensus 1 ~~~~~~~g~~~y~~~gysf~yP~~W~~~~~~~~~G~~~~f~d~~~~~~nvsV~v~p~~~~si~dlGspe~~~~~v~~~l~ 80 (177)
T 1v2b_A 1 GKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQVDYLLG 80 (177)
T ss_dssp ------CCEEEEECSSEEEEEETTCEECCCCCSTTEEEEEEETTEEEEEEEEEEEECSCSSGGGGCSHHHHHHHTGGGC-
T ss_pred CCCCCCCCceEEecCCEEEEcCCCCcccccccCCCceEEEeCCcCCCccEEEEEeCCCCCChhHCCCHHHHHHHHHHHHH
Confidence 57888999999999999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCCCCccccccceeeecccC----CCeEEEEEEEEcCCCCCCcceEEEEEEEeCCEEEEEEeEecccccc
Q 025092 166 KQAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWF 241 (258)
Q Consensus 166 ~~~~~~~t~s~~g~~~~~v~~a~ll~a~~r----~~YY~~Ey~~~~~~g~e~~rH~L~~~tv~~gkLYtl~~qa~e~rW~ 241 (258)
++++.+++++++||+|+.+++++||++.+| ++||+|||.+++++|+|+.||+|+++||+|||||+|++|++|+||+
T Consensus 81 ~~~~~~~~~~~~gf~~~~~~~a~ll~a~~r~~~G~~YY~~E~~~~~~~g~e~~rH~l~~~tv~~gkLY~l~~~a~e~~W~ 160 (177)
T 1v2b_A 81 RQAYSGKTDSEGGFESDAVAIANVLETSTAEVGGKQYYYLSILTRTADGNEGGKHQLVTATVNDGKLYICKAQAGDKRWF 160 (177)
T ss_dssp -----------------CCCEEEEEEEEEEEETTEEEEEEEEEEEC-----CCEEEEEEEEEETTEEEEEEEEEEGGGCS
T ss_pred HHhhcccccccCCcccCcccceEEEEeEEEEeCCeEEEEEEEEEecCCCCccccEEEEEEEEECCEEEEEEEecCHHHhh
Confidence 999999899999999999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred ch-hHHHHHHHhhccccC
Q 025092 242 KG-TRKYVESTASSFSVA 258 (258)
Q Consensus 242 k~-~~~~l~~vv~SF~V~ 258 (258)
++ ++. |++|++||+||
T Consensus 161 k~~~~~-l~~v~~SF~v~ 177 (177)
T 1v2b_A 161 KGAKKF-VENTATSFSLA 177 (177)
T ss_dssp TTTTHH-HHHHHHTCEEC
T ss_pred hhHHHH-HHHHHhheecC
Confidence 96 775 99999999997
No 2
>2xb3_A PSBP protein; photosynthesis, zinc-binding, photosystem; 2.80A {Thermosynechococcus elongatus}
Probab=100.00 E-value=3.4e-36 Score=253.23 Aligned_cols=151 Identities=25% Similarity=0.443 Sum_probs=130.4
Q ss_pred CCCCceecc--CCceEEecCCCCccCccccCC-CceEEeecCCCCCCcEEEEEecCC-CCccccCCChHHHHHHHHHHHH
Q 025092 90 TNTDFLPYN--GDGFKLSIPSKWNPSKEREFP-GQVLRYEDNFDSNSNVSVIITPTD-KKSITDYGSPEEFLSKVDYLLG 165 (258)
Q Consensus 90 ~~~~f~~y~--~dgYsf~yP~~W~~~~e~~~~-G~dv~f~d~~~~~~nVsV~v~p~~-~~sI~d~Gspeeva~~v~~~L~ 165 (258)
.+.||..|. ++||+|.||++|++.. ++ |++++|+|+++..+||+|+|+|+. .++|+|||+|++ +++.|+
T Consensus 4 ~~~g~~~~~D~~~gysf~~P~~W~~~~---~~~g~~v~f~d~~~~~~~v~V~v~p~~~~~~l~~~G~~e~----va~~l~ 76 (165)
T 2xb3_A 4 ATSGLQAYVDSYDGYEFLYPRGWVQVQ---VEDPVDVVFHDIIETTENVSVVVNTVASTKSLEELGSPEE----VGDRLL 76 (165)
T ss_dssp --CCEEEEEETTTTEEEEEETTEEEEC---CCTTEEEEEEESSCTTSEEEEEEEECSSCCCSGGGCCHHH----HHHHHH
T ss_pred CCCCceEEEcCCCCEEEEcCCCCeEec---CCCCceEEEECcccCCceEEEEEecCCCCCChHHcCCHHH----HHHHHH
Confidence 357899999 8999999999997543 44 999999999999999999999995 499999999999 667788
Q ss_pred hhhhcCCCCCCCCCCccccccceeeecccC----CCeEEEEEEEEcCCC--CCCcceEEEEEEEeCCEEEEEEeEecccc
Q 025092 166 KQAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADG--DEGGKHQLITATVKGGKLYICKAQAGDKR 239 (258)
Q Consensus 166 ~~~~~~~t~s~~g~~~~~v~~a~ll~a~~r----~~YY~~Ey~~~~~~g--~e~~rH~L~~~tv~~gkLYtl~~qa~e~r 239 (258)
++.++++ +..+.++|+++.++ ++||+|||.+++++| +|+.||+|+++++.+||||+|++|+||++
T Consensus 77 ~~~~~~~---------~~~~~~~l~~a~~r~~~G~~yY~~Ey~~~~~~~~~~~~~rh~l~~~~v~~g~lY~l~~sape~~ 147 (165)
T 2xb3_A 77 RNIIAPS---------ESGRSSALIAATSQKADDKTYYILEYAVTLPGDGNTAQQRHNLSSIAVSRGKVYTLSVSAPEER 147 (165)
T ss_dssp HHTTSCT---------TSSCEEEEEEEEEEEETTEEEEEEEEEEECC-----CCEEEEEEEEEEETTEEEEEEEEEEGGG
T ss_pred HHhhcCC---------CCCcceEEEEeeeeecCCceEEEEEEEEecCCCccCccccEEEEEEEEECCEEEEEEEecCHHH
Confidence 8877753 22347899999987 889999999999863 35799999999999999999999999999
Q ss_pred ccchhHHHHHHHhhcccc
Q 025092 240 WFKGTRKYVESTASSFSV 257 (258)
Q Consensus 240 W~k~~~~~l~~vv~SF~V 257 (258)
|++++++ |++|++||+|
T Consensus 148 w~~~~~~-l~~v~~SF~v 164 (165)
T 2xb3_A 148 WPKVEDQ-FKTIVSSFTV 164 (165)
T ss_dssp HHHHHHH-HHHHHHTCEE
T ss_pred hHHHHHH-HHHHHhhEEe
Confidence 9998886 9999999997
No 3
>2lnj_A SLL1418 protein, putative uncharacterized protein SLL1418; cyanop, photosystem II, PSBP, photosynthesis; NMR {Synechocystis SP}
Probab=100.00 E-value=5.9e-37 Score=259.92 Aligned_cols=151 Identities=26% Similarity=0.450 Sum_probs=132.8
Q ss_pred CCCceecc--CCceEEecCCCCccCcccc-CCCceEEeecCCCCCCcEEEEEecCCC-CccccCCChHHHHHHHHHHHHh
Q 025092 91 NTDFLPYN--GDGFKLSIPSKWNPSKERE-FPGQVLRYEDNFDSNSNVSVIITPTDK-KSITDYGSPEEFLSKVDYLLGK 166 (258)
Q Consensus 91 ~~~f~~y~--~dgYsf~yP~~W~~~~e~~-~~G~dv~f~d~~~~~~nVsV~v~p~~~-~sI~d~Gspeeva~~v~~~L~~ 166 (258)
+.||.+|. .|||+|+||++|++..... ..|++++|+|+++..+||+|+|+|+.+ ++|+|||+|++ +++.|++
T Consensus 11 ~~g~~~y~d~~~gy~f~~P~gW~~~~~~~~~~g~~v~f~d~~~~~~nvsV~v~p~~~~~si~d~G~pe~----va~~l~~ 86 (170)
T 2lnj_A 11 IASLQRYSDTKDGYEFLYPNGWIGVDVKGASPGVDVVFRDLIERDENLSVIISEIPSDKTLTDLGTATD----VGYRFMK 86 (170)
Confidence 57899999 8899999999998543211 139999999999999999999999966 99999999999 7778999
Q ss_pred hhhcCCCCCCCCCCccccccceeeecccC----CCeEEEEEEEEcCCCCCCcceEEEEEEEeCCEEEEEEeEeccccccc
Q 025092 167 QAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWFK 242 (258)
Q Consensus 167 ~~~~~~t~s~~g~~~~~v~~a~ll~a~~r----~~YY~~Ey~~~~~~g~e~~rH~L~~~tv~~gkLYtl~~qa~e~rW~k 242 (258)
++++++ +..+.++||++.++ ++||+|||+++++++ +.||+|++++|.+||||+|++|+||++|++
T Consensus 87 ~~~~~~---------~~~~~a~li~a~~~~~~G~~yY~~Ey~~~~~~~--~~rh~l~~~~v~~gklY~l~~~ape~~w~~ 155 (170)
T 2lnj_A 87 TVNDAS---------QGDRQAELINAEARDEDGQVYYTLEYRVLVGDN--VERHDLASVTTNRGKLITFDLSTAEDRWDT 155 (170)
Confidence 888763 23348899999998 899999999999853 799999999999999999999999999999
Q ss_pred hhHHHHHHHhhcccc
Q 025092 243 GTRKYVESTASSFSV 257 (258)
Q Consensus 243 ~~~~~l~~vv~SF~V 257 (258)
.+++ |++|++||+|
T Consensus 156 ~~~~-l~~v~~SF~v 169 (170)
T 2lnj_A 156 VKSL-FDTVASSFHV 169 (170)
Confidence 8886 9999999997
No 4
>1tu1_A Hypothetical protein PA0094; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; 1.95A {Pseudomonas aeruginosa} SCOP: d.107.1.3
Probab=97.68 E-value=0.00084 Score=54.67 Aligned_cols=137 Identities=9% Similarity=0.023 Sum_probs=79.6
Q ss_pred eeccCCceEEecCCCCccCccccCCCceEEeecCCCCC--CcEEEEEecCCCCccccCCChHHHHHHHHHHHHhhhhcCC
Q 025092 95 LPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSN--SNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGK 172 (258)
Q Consensus 95 ~~y~~dgYsf~yP~~W~~~~e~~~~G~dv~f~d~~~~~--~nVsV~v~p~~~~sI~d~Gspeeva~~v~~~L~~~~~~~~ 172 (258)
..|.-..++|.+|.+|. .. ...+.+-....+. -||.|...++ .+=.+++++++.--..|.++ +.
T Consensus 4 ~~y~~~Egsl~lP~gw~---D~---t~nv~~~~~~~~~g~~~lvIsR~~~-----~~~~~l~~~~~~q~~~l~~~-l~-- 69 (148)
T 1tu1_A 4 TLYRLHEADLEIPDAWQ---DQ---SINIFKLPASGPAREASFVISRDAS-----QGDAPFADYVARQLENAEKQ-LP-- 69 (148)
T ss_dssp EEEECSSEEEEEETTSE---EC---CBEEEEECCBTTBCCEEEEEEEECC-----CTTSCHHHHHHHHHHHHHHH-ST--
T ss_pred ceEEECCEEEeCCCCcE---ee---eEEEEEcCCCCCCCceEEEEEeccC-----CCCCCHHHHHHHHHHHHHhh-Cc--
Confidence 45788999999999996 22 2334443322211 2444444433 22124455443211222222 22
Q ss_pred CCCCCCCCccccccceeeecccCCCeEEEEEEEEcCCCCCCcceEEEEEEEeCCEEEEEEeEeccccccchhHHHHHHHh
Q 025092 173 TSSEGGFDPDAVATANILEASVRPPYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWFKGTRKYVESTA 252 (258)
Q Consensus 173 t~s~~g~~~~~v~~a~ll~a~~r~~YY~~Ey~~~~~~g~e~~rH~L~~~tv~~gkLYtl~~qa~e~rW~k~~~~~l~~vv 252 (258)
++.........+ ....-..+||.-...+ ...|++-++.+..+++|+|+.+++...|+.... .++.|+
T Consensus 70 -----~y~~~~~~~~~l----~g~~a~~~e~~~~~~g---~~~~Q~q~~~~~~~~~l~~t~t~~~~~~~~~~~-~~~~i~ 136 (148)
T 1tu1_A 70 -----GFKLHKRWDINI----HGHAAVLLDYQWQREG---RDLMLRQVFIERRPAVLITTLTTTPADLPHHEP-AWKQAM 136 (148)
T ss_dssp -----TCEEEEEEEEEE----TTEEEEEEEEEEEETT---EEEEEEEEEECCSSSEEEEEEEECGGGHHHHHH-HHHHHH
T ss_pred -----CcEEeeeEeEEE----cCCcEEEEEEEEccCC---EEEEEEEEEEEECCeEEEEEEEcCCCCCHHHHH-HHHHHH
Confidence 221111111121 1123355555544443 679999998888779999999999999999777 499999
Q ss_pred hccccC
Q 025092 253 SSFSVA 258 (258)
Q Consensus 253 ~SF~V~ 258 (258)
+||+..
T Consensus 137 ~Sf~~~ 142 (148)
T 1tu1_A 137 QTLVPR 142 (148)
T ss_dssp HTCEEC
T ss_pred HhcccC
Confidence 999863
No 5
>3lyd_A Uncharacterized protein; PSI-2, MCSG, GEBA, genomic encyclopae bacteria and archaea, structural genomics, protein structur initiative; HET: MSE; 1.45A {Jonesia denitrificans}
Probab=93.23 E-value=2.3 Score=35.18 Aligned_cols=132 Identities=16% Similarity=0.156 Sum_probs=73.0
Q ss_pred CCceEEecCCCCccCccccCCCceEEee-cCC--CCCCcEEEEEecCCCCccccCCChHHHHHHHHHHHHhhhhcCCCCC
Q 025092 99 GDGFKLSIPSKWNPSKEREFPGQVLRYE-DNF--DSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSS 175 (258)
Q Consensus 99 ~dgYsf~yP~~W~~~~e~~~~G~dv~f~-d~~--~~~~nVsV~v~p~~~~sI~d~Gspeeva~~v~~~L~~~~~~~~t~s 175 (258)
.-++++-.|.||++.... |.-+.-. +.. .-.-|+-|++.-.... + .|+ .-..|.+. ++.
T Consensus 17 ~p~~~v~~P~gWe~~~~~---~~~~~~~~~~~~~~F~pN~vVtv~r~~~~----~--~e~----~r~el~~~-~~~---- 78 (161)
T 3lyd_A 17 LTGFTVPIPETWQPDPTM---GTQFAARPHTPPQGFTPNIIGTVRRAATG----A--LHN----QRTELDQR-ATQ---- 78 (161)
T ss_dssp CCEEEEECCTTEEECTTS---SSSEEEEESSCCSSSCCEEEEEEEEECTT----H--HHH----HHHHHHHH-HTT----
T ss_pred CceeeccCCCCceEcCCC---CceEEeccCCCCCCccccEEEEEEecCcH----H--HHH----HHHHHHHH-Hhh----
Confidence 457999999999765322 3322222 221 2345888877654211 2 233 22223321 110
Q ss_pred CCCCCccccccceeeecccC-CCeEEEEEEEEcCCCCCCcceE--EEEEEE-eCCEEEEE--EeEeccccccchhHHHHH
Q 025092 176 EGGFDPDAVATANILEASVR-PPYYFLSVLTRTADGDEGGKHQ--LITATV-KGGKLYIC--KAQAGDKRWFKGTRKYVE 249 (258)
Q Consensus 176 ~~g~~~~~v~~a~ll~a~~r-~~YY~~Ey~~~~~~g~e~~rH~--L~~~tv-~~gkLYtl--~~qa~e~rW~k~~~~~l~ 249 (258)
.|+. +....-+..-. ..-|..||.=..+. .+.+. +..+.| .++..|++ +++|.+.+-+...+. ++
T Consensus 79 ----lp~~-~~~~r~~~~~~G~pa~~iey~y~~~~---~g~~aq~~~~vvve~~~v~~vv~lt~T~~~~q~~~~~~d-~q 149 (161)
T 3lyd_A 79 ----LPDY-AERGRTETTVDGFPAYHIEYAYRHHG---TITIAQMITLVEVSHPHAVDIIQLTATCAGDQTADYWDT-FR 149 (161)
T ss_dssp ----STTC-EEEEEEEEEETTEEEEEEEEEEEETT---TEEEEEEEEEEEEECSSCEEEEEEEEEEEGGGHHHHHHH-HH
T ss_pred ----CCCc-EeecccccccCCcccEEEEEEEecCC---CceEeeEEEEEEEecCCEEEEEEEEEEeccccchHHHHH-HH
Confidence 1221 11111111111 55677777754454 45662 445555 46777777 999999999887775 99
Q ss_pred HHhhcccc
Q 025092 250 STASSFSV 257 (258)
Q Consensus 250 ~vv~SF~V 257 (258)
.|++||+|
T Consensus 150 ~iv~sl~v 157 (161)
T 3lyd_A 150 LMHADLTV 157 (161)
T ss_dssp HHHHTCEE
T ss_pred HHhheeEe
Confidence 99999987
No 6
>3hlz_A Uncharacterized protein BT_1490; NP_810393.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=40.64 E-value=28 Score=30.52 Aligned_cols=39 Identities=23% Similarity=0.387 Sum_probs=27.1
Q ss_pred CCceEEecCCCCccCccccCCCceEEeecCCCCCCcEEEEEe
Q 025092 99 GDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNVSVIIT 140 (258)
Q Consensus 99 ~dgYsf~yP~~W~~~~e~~~~G~dv~f~d~~~~~~nVsV~v~ 140 (258)
+.=|+..||.+|++-...+ | --.|.||..=.+|..+.--
T Consensus 11 gaWfs~~yP~~W~EfEd~E--~-sflFynp~~WtGNfRISay 49 (269)
T 3hlz_A 11 GAWFSMNYPSDWNEFEDGE--G-SFLFYNPDVWTGNFRISAF 49 (269)
T ss_dssp GGCEEEEECTTCEEECCCT--T-EEEEECSSSCCCEEEEEEE
T ss_pred CceeEEecCCCcccccCCC--C-ceeeeChhhcccceEEEec
Confidence 5569999999997432221 2 3578888888888876643
No 7
>2pq4_B Periplasmic nitrate reductase precursor; NAPD/NAPA1-35, mixed beta-alpha sandwich structure, protein- peptide complex, alpha-helix; NMR {Escherichia coli}
Probab=27.36 E-value=32 Score=21.02 Aligned_cols=12 Identities=25% Similarity=0.138 Sum_probs=8.9
Q ss_pred chhHHHHHHHHH
Q 025092 52 VSRRLALTVLIG 63 (258)
Q Consensus 52 ~~RR~~L~~~a~ 63 (258)
++||..|-+.+.
T Consensus 3 lsRR~FLK~~aa 14 (35)
T 2pq4_B 3 LSRRSFMKANAV 14 (35)
T ss_dssp CCSHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 679999975443
No 8
>1ywi_A Formin-binding protein 3; WW domain, class II, proline-rich peptides, protein-protein interactions, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1ywj_A 1zr7_A 2dyf_A
Probab=25.87 E-value=38 Score=21.13 Aligned_cols=21 Identities=19% Similarity=0.479 Sum_probs=18.6
Q ss_pred EEeCCEEEEEEeEeccccccc
Q 025092 222 TVKGGKLYICKAQAGDKRWFK 242 (258)
Q Consensus 222 tv~~gkLYtl~~qa~e~rW~k 242 (258)
...+|+.|-.+....+.+|.+
T Consensus 18 ~~~~G~~YYyN~~T~eS~We~ 38 (41)
T 1ywi_A 18 KSPDGRTYYYNTETKQSTWEK 38 (41)
T ss_dssp EETTTEEEEEETTTTEEEESC
T ss_pred ECCCCCEEEEECCCCCEEeCC
Confidence 356899999999999999987
No 9
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=23.88 E-value=23 Score=22.04 Aligned_cols=21 Identities=29% Similarity=0.601 Sum_probs=18.4
Q ss_pred EeCCEEEEEEeEeccccccch
Q 025092 223 VKGGKLYICKAQAGDKRWFKG 243 (258)
Q Consensus 223 v~~gkLYtl~~qa~e~rW~k~ 243 (258)
..+|+.|-.+....|.+|.+-
T Consensus 17 ~~~G~~YYyN~~T~eS~We~P 37 (40)
T 2ysi_A 17 TPDGKVYYYNARTRESAWTKP 37 (40)
T ss_dssp CTTSCEEEEETTTCCEESSCC
T ss_pred CCCCCEEEEECCCCCEEeCCC
Confidence 468999999999999999873
No 10
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=20.34 E-value=27 Score=21.23 Aligned_cols=21 Identities=24% Similarity=0.438 Sum_probs=18.2
Q ss_pred EeCCEEEEEEeEeccccccch
Q 025092 223 VKGGKLYICKAQAGDKRWFKG 243 (258)
Q Consensus 223 v~~gkLYtl~~qa~e~rW~k~ 243 (258)
..+|+.|-.+....+.+|.+-
T Consensus 13 ~~~G~~YYyN~~T~es~We~P 33 (37)
T 1e0l_A 13 TADGKTYYYNNRTLESTWEKP 33 (37)
T ss_dssp CTTSCEEEEETTTTEEESSCC
T ss_pred CCCCCEEEEECCCCCEEecCC
Confidence 457999999999999999873
Done!