Query 025093
Match_columns 258
No_of_seqs 229 out of 1345
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 03:36:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025093.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025093hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oi8_A Uncharacterized protein 99.7 7.5E-17 2.6E-21 129.4 7.9 89 164-257 2-90 (156)
2 3lhh_A CBS domain protein; str 99.6 5.1E-16 1.8E-20 126.6 4.8 89 163-256 5-93 (172)
3 3ocm_A Putative membrane prote 99.5 5E-14 1.7E-18 115.3 6.7 75 182-257 14-88 (173)
4 3lv9_A Putative transporter; C 99.4 1.6E-13 5.3E-18 108.5 5.6 72 184-256 3-74 (148)
5 2qrd_G Protein C1556.08C; AMPK 99.2 7E-12 2.4E-16 111.6 5.2 72 185-257 2-74 (334)
6 3oco_A Hemolysin-like protein 99.2 4.1E-12 1.4E-16 101.0 1.1 69 187-256 3-72 (153)
7 3t4n_C Nuclear protein SNF4; C 99.1 9.3E-12 3.2E-16 110.3 2.7 74 183-257 8-82 (323)
8 3k6e_A CBS domain protein; str 99.1 7.9E-11 2.7E-15 94.5 4.2 62 193-256 3-65 (156)
9 2v8q_E 5'-AMP-activated protei 99.0 2.1E-10 7.1E-15 102.0 4.1 71 183-256 16-86 (330)
10 3hf7_A Uncharacterized CBS-dom 98.9 1.3E-09 4.6E-14 84.1 4.1 53 203-256 1-53 (130)
11 3jtf_A Magnesium and cobalt ef 98.9 1.7E-09 5.9E-14 83.2 4.7 56 201-257 2-57 (129)
12 3i8n_A Uncharacterized protein 98.8 1.2E-09 4.2E-14 84.1 3.1 56 200-256 2-57 (130)
13 3lfr_A Putative metal ION tran 98.8 2.6E-09 8.8E-14 83.0 4.4 55 202-257 1-55 (136)
14 3nqr_A Magnesium and cobalt ef 98.8 5.6E-09 1.9E-13 80.0 4.4 55 202-257 1-55 (127)
15 2zy9_A Mg2+ transporter MGTE; 98.7 3.1E-08 1.1E-12 93.1 8.1 86 164-257 110-209 (473)
16 3kxr_A Magnesium transporter, 98.7 7.9E-08 2.7E-12 80.4 9.6 68 186-257 36-106 (205)
17 2yvy_A MGTE, Mg2+ transporter 98.6 4.3E-08 1.5E-12 85.6 6.1 69 185-257 116-189 (278)
18 3ctu_A CBS domain protein; str 98.4 1.3E-07 4.5E-12 74.6 4.2 60 195-256 6-65 (156)
19 2emq_A Hypothetical conserved 98.4 2.4E-07 8.2E-12 73.0 4.3 61 194-256 1-61 (157)
20 4esy_A CBS domain containing m 98.3 8.9E-07 3E-11 71.1 6.0 61 190-256 6-66 (170)
21 3k2v_A Putative D-arabinose 5- 98.3 4.3E-07 1.5E-11 71.2 4.0 51 204-256 28-78 (149)
22 4fxs_A Inosine-5'-monophosphat 98.3 4.1E-07 1.4E-11 86.0 3.9 81 163-256 52-137 (496)
23 3lqn_A CBS domain protein; csg 98.2 3.7E-07 1.3E-11 71.4 2.5 57 198-256 9-65 (150)
24 1yav_A Hypothetical protein BS 98.2 8.9E-07 3.1E-11 70.0 4.4 55 200-256 10-64 (159)
25 4gqw_A CBS domain-containing p 98.2 1.5E-06 5E-11 67.6 4.9 53 202-256 3-55 (152)
26 3l2b_A Probable manganase-depe 98.2 1E-06 3.6E-11 74.9 4.4 53 202-257 183-235 (245)
27 2oux_A Magnesium transporter; 98.2 3.2E-06 1.1E-10 74.0 7.6 69 185-257 118-191 (286)
28 1zfj_A Inosine monophosphate d 98.1 1.8E-06 6.2E-11 81.2 5.5 81 164-256 54-140 (491)
29 3kh5_A Protein MJ1225; AMPK, A 98.1 9.8E-07 3.3E-11 75.7 2.3 82 164-256 51-132 (280)
30 3org_A CMCLC; transporter, tra 98.1 8.6E-07 2.9E-11 86.1 1.6 53 202-256 451-504 (632)
31 2pfi_A Chloride channel protei 98.0 4.6E-06 1.6E-10 65.7 4.8 60 194-256 3-63 (164)
32 2rc3_A CBS domain; in SITU pro 98.0 3.1E-06 1.1E-10 64.8 3.6 49 205-256 7-56 (135)
33 3fhm_A Uncharacterized protein 98.0 4.3E-06 1.5E-10 66.6 4.1 58 197-256 17-75 (165)
34 2yzi_A Hypothetical protein PH 98.0 9.1E-06 3.1E-10 62.3 5.6 54 199-256 2-55 (138)
35 3ddj_A CBS domain-containing p 98.0 3.7E-06 1.3E-10 73.0 3.7 78 164-256 64-141 (296)
36 2j9l_A Chloride channel protei 98.0 3.8E-06 1.3E-10 67.7 3.5 54 202-256 9-67 (185)
37 3fv6_A YQZB protein; CBS domai 97.9 1.2E-05 4.2E-10 63.5 5.6 56 200-256 77-134 (159)
38 2ef7_A Hypothetical protein ST 97.9 1.4E-05 4.8E-10 60.8 5.6 51 201-256 1-51 (133)
39 2cu0_A Inosine-5'-monophosphat 97.9 2.9E-06 9.8E-11 79.9 1.8 80 164-257 57-141 (486)
40 2p9m_A Hypothetical protein MJ 97.9 1.6E-05 5.3E-10 60.9 5.3 52 201-256 5-56 (138)
41 2rih_A Conserved protein with 97.9 1.5E-05 5.1E-10 61.5 5.0 50 204-256 5-55 (141)
42 1me8_A Inosine-5'-monophosphat 97.8 5.8E-06 2E-10 78.2 1.8 81 164-257 61-149 (503)
43 1pbj_A Hypothetical protein; s 97.8 3E-05 1E-09 58.1 5.2 52 200-256 61-112 (125)
44 4fry_A Putative signal-transdu 97.8 1.6E-05 5.6E-10 62.4 3.9 50 204-256 7-60 (157)
45 2rc3_A CBS domain; in SITU pro 97.7 3.8E-05 1.3E-09 58.6 5.7 52 200-256 70-121 (135)
46 3fv6_A YQZB protein; CBS domai 97.7 3.6E-05 1.2E-09 60.7 5.6 51 201-256 14-64 (159)
47 1vr9_A CBS domain protein/ACT 97.7 8E-06 2.7E-10 68.2 1.5 84 165-256 30-120 (213)
48 3usb_A Inosine-5'-monophosphat 97.7 2.9E-05 9.9E-10 73.6 5.4 81 164-256 77-163 (511)
49 3gby_A Uncharacterized protein 97.7 3.8E-05 1.3E-09 58.2 5.1 50 202-256 3-52 (128)
50 4fry_A Putative signal-transdu 97.7 3.9E-05 1.3E-09 60.2 5.2 51 201-256 75-125 (157)
51 1o50_A CBS domain-containing p 97.7 3.2E-05 1.1E-09 60.8 4.6 52 200-256 12-64 (157)
52 3kpb_A Uncharacterized protein 97.7 2.2E-05 7.6E-10 58.7 3.5 49 204-256 1-49 (122)
53 2d4z_A Chloride channel protei 97.7 4.9E-05 1.7E-09 65.5 5.6 54 200-256 9-63 (250)
54 2o16_A Acetoin utilization pro 97.6 4.3E-05 1.5E-09 60.5 4.5 51 202-256 3-53 (160)
55 1y5h_A Hypothetical protein RV 97.6 3E-05 1E-09 58.9 3.1 52 201-256 5-56 (133)
56 3kpb_A Uncharacterized protein 97.6 9E-05 3.1E-09 55.3 5.7 51 202-256 60-110 (122)
57 2nyc_A Nuclear protein SNF4; b 97.6 6.3E-05 2.1E-09 57.7 4.8 53 200-256 4-59 (144)
58 3fhm_A Uncharacterized protein 97.6 9.5E-05 3.3E-09 58.6 5.9 52 200-256 89-140 (165)
59 1pvm_A Conserved hypothetical 97.6 0.00016 5.3E-09 58.5 7.0 62 191-256 58-123 (184)
60 1y5h_A Hypothetical protein RV 97.6 6.3E-05 2.2E-09 57.1 4.3 51 201-256 71-121 (133)
61 1o50_A CBS domain-containing p 97.6 8.8E-05 3E-09 58.2 5.3 52 200-256 92-143 (157)
62 3fio_A A cystathionine beta-sy 97.5 0.00014 4.7E-09 49.1 5.5 38 216-256 2-39 (70)
63 2nyc_A Nuclear protein SNF4; b 97.5 8.2E-05 2.8E-09 57.0 4.8 54 201-256 74-131 (144)
64 4gqw_A CBS domain-containing p 97.5 7.1E-05 2.4E-09 57.8 4.4 53 200-256 81-133 (152)
65 1pbj_A Hypothetical protein; s 97.5 8.1E-05 2.8E-09 55.7 4.5 47 205-256 2-48 (125)
66 4avf_A Inosine-5'-monophosphat 97.5 2.1E-05 7.2E-10 74.2 1.2 79 164-256 52-135 (490)
67 3pc3_A CG1753, isoform A; CBS, 97.5 6.5E-05 2.2E-09 71.3 4.6 53 201-256 381-434 (527)
68 2uv4_A 5'-AMP-activated protei 97.5 0.00021 7.3E-09 55.7 6.5 53 202-256 85-141 (152)
69 3lfr_A Putative metal ION tran 97.5 0.00012 4E-09 56.3 4.8 51 201-256 67-117 (136)
70 2o16_A Acetoin utilization pro 97.5 0.00014 4.8E-09 57.4 5.3 51 201-256 75-125 (160)
71 2ef7_A Hypothetical protein ST 97.4 0.00015 5.1E-09 55.0 5.0 51 202-256 65-115 (133)
72 4esy_A CBS domain containing m 97.4 0.0001 3.5E-09 58.8 3.5 51 201-256 102-152 (170)
73 3k2v_A Putative D-arabinose 5- 97.3 0.00017 5.9E-09 56.0 4.6 52 200-256 91-142 (149)
74 3lhh_A CBS domain protein; str 97.3 0.00062 2.1E-08 54.4 7.5 60 192-256 95-154 (172)
75 3lv9_A Putative transporter; C 97.3 0.00053 1.8E-08 53.0 6.8 60 192-256 76-135 (148)
76 3i8n_A Uncharacterized protein 97.3 0.00043 1.5E-08 52.4 6.1 50 202-256 70-119 (130)
77 3jtf_A Magnesium and cobalt ef 97.3 0.00043 1.5E-08 52.4 5.9 50 202-256 67-116 (129)
78 3nqr_A Magnesium and cobalt ef 97.3 0.00032 1.1E-08 52.9 5.1 50 202-256 67-116 (127)
79 2rih_A Conserved protein with 97.3 0.00063 2.2E-08 52.1 6.9 50 202-256 69-118 (141)
80 3oco_A Hemolysin-like protein 97.2 0.00066 2.3E-08 52.9 6.5 60 192-256 74-133 (153)
81 2p9m_A Hypothetical protein MJ 97.2 0.00026 8.9E-09 53.9 3.9 52 201-256 70-126 (138)
82 3oi8_A Uncharacterized protein 97.2 0.00038 1.3E-08 54.7 4.9 50 202-256 101-150 (156)
83 2uv4_A 5'-AMP-activated protei 97.1 0.00031 1.1E-08 54.7 3.7 49 202-256 21-69 (152)
84 3hf7_A Uncharacterized CBS-dom 97.1 0.00066 2.3E-08 51.6 5.4 50 202-256 68-117 (130)
85 3sl7_A CBS domain-containing p 97.1 0.00039 1.3E-08 55.3 4.0 53 200-256 94-146 (180)
86 3t4n_C Nuclear protein SNF4; C 97.1 0.00071 2.4E-08 59.2 6.0 54 201-256 253-310 (323)
87 2emq_A Hypothetical conserved 97.1 0.00092 3.1E-08 52.0 6.0 50 201-256 80-129 (157)
88 2j9l_A Chloride channel protei 97.0 0.0011 3.7E-08 52.9 6.3 51 201-256 105-155 (185)
89 3ghd_A A cystathionine beta-sy 97.0 0.0012 4E-08 45.4 5.5 39 215-256 1-39 (70)
90 2yzq_A Putative uncharacterize 97.0 0.00055 1.9E-08 58.4 4.6 53 200-256 217-269 (282)
91 1yav_A Hypothetical protein BS 97.0 0.00058 2E-08 53.5 4.3 50 201-256 83-132 (159)
92 3gby_A Uncharacterized protein 97.0 0.00078 2.7E-08 50.7 4.9 49 204-256 68-116 (128)
93 3ddj_A CBS domain-containing p 97.0 0.00048 1.6E-08 59.5 4.1 52 199-256 15-66 (296)
94 3lqn_A CBS domain protein; csg 97.0 0.0013 4.3E-08 50.9 6.2 50 201-256 84-133 (150)
95 2yzi_A Hypothetical protein PH 97.0 0.0014 4.8E-08 49.8 6.1 51 201-256 69-119 (138)
96 3kxr_A Magnesium transporter, 96.8 0.0015 5.2E-08 54.1 5.3 52 201-256 113-164 (205)
97 2yzq_A Putative uncharacterize 96.7 0.0015 5E-08 55.8 5.0 51 202-256 58-108 (282)
98 3ctu_A CBS domain protein; str 96.6 0.0012 4E-08 51.5 3.4 50 202-257 84-133 (156)
99 2pfi_A Chloride channel protei 96.5 0.0023 7.8E-08 49.9 4.5 52 202-256 82-137 (164)
100 1me8_A Inosine-5'-monophosphat 96.5 0.00042 1.5E-08 65.4 0.0 54 202-257 159-212 (503)
101 1vr9_A CBS domain protein/ACT 96.5 0.0036 1.2E-07 51.8 5.6 49 204-256 13-61 (213)
102 2yvy_A MGTE, Mg2+ transporter 96.4 0.0028 9.6E-08 54.7 4.9 53 201-257 196-248 (278)
103 2qrd_G Protein C1556.08C; AMPK 96.4 0.0033 1.1E-07 55.1 5.0 53 202-256 249-305 (334)
104 3usb_A Inosine-5'-monophosphat 96.3 0.0033 1.1E-07 59.4 4.6 54 200-256 171-224 (511)
105 2oux_A Magnesium transporter; 96.2 0.0038 1.3E-07 54.3 4.5 53 201-257 198-250 (286)
106 3kh5_A Protein MJ1225; AMPK, A 96.2 0.0024 8.3E-08 54.1 2.9 51 202-256 221-271 (280)
107 1pvm_A Conserved hypothetical 96.1 0.0042 1.4E-07 49.9 3.9 41 204-247 9-49 (184)
108 4avf_A Inosine-5'-monophosphat 96.1 0.001 3.4E-08 62.6 0.0 54 202-257 145-198 (490)
109 3k6e_A CBS domain protein; str 96.1 0.0031 1E-07 49.7 2.8 50 201-256 83-132 (156)
110 4fxs_A Inosine-5'-monophosphat 95.9 0.0014 4.7E-08 61.8 0.4 53 202-256 147-199 (496)
111 1vrd_A Inosine-5'-monophosphat 95.9 0.0021 7.1E-08 60.3 1.6 58 190-256 86-143 (494)
112 1vrd_A Inosine-5'-monophosphat 95.9 0.0013 4.6E-08 61.6 0.0 53 202-256 153-205 (494)
113 2zy9_A Mg2+ transporter MGTE; 95.9 0.0079 2.7E-07 56.2 5.2 59 192-257 210-268 (473)
114 3ocm_A Putative membrane prote 95.8 0.011 3.8E-07 47.3 5.3 59 192-256 89-147 (173)
115 2v8q_E 5'-AMP-activated protei 95.8 0.0087 3E-07 52.3 4.9 52 203-256 258-313 (330)
116 3org_A CMCLC; transporter, tra 95.3 0.013 4.6E-07 56.6 4.7 48 205-257 569-616 (632)
117 1jcn_A Inosine monophosphate d 95.1 0.0044 1.5E-07 58.4 0.4 53 202-256 171-223 (514)
118 1jcn_A Inosine monophosphate d 94.9 0.0061 2.1E-07 57.5 0.9 57 192-256 101-159 (514)
119 1zfj_A Inosine monophosphate d 94.8 0.032 1.1E-06 52.1 5.5 52 202-256 150-201 (491)
120 3pc3_A CG1753, isoform A; CBS, 93.8 0.059 2E-06 50.8 5.1 61 191-256 435-501 (527)
121 4af0_A Inosine-5'-monophosphat 93.4 0.014 4.9E-07 55.1 0.0 51 202-256 198-248 (556)
122 2cu0_A Inosine-5'-monophosphat 92.1 0.028 9.4E-07 52.6 0.0 51 202-256 148-198 (486)
123 2d4z_A Chloride channel protei 85.3 0.63 2.2E-05 39.5 3.7 44 208-256 193-236 (250)
124 4af0_A Inosine-5'-monophosphat 75.1 1 3.6E-05 42.5 1.7 60 189-256 128-189 (556)
125 3fpn_A Geobacillus stearotherm 28.2 94 0.0032 22.9 5.0 49 190-243 5-53 (119)
126 3arc_L Photosystem II reaction 24.7 84 0.0029 18.1 3.1 18 12-29 18-35 (37)
127 2hje_A Autoinducer 2 sensor ki 21.8 63 0.0021 26.7 3.1 18 240-257 121-138 (221)
128 4dfc_B Uvrabc system protein A 20.6 1.2E+02 0.0039 22.6 4.2 49 190-243 7-55 (126)
No 1
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.67 E-value=7.5e-17 Score=129.41 Aligned_cols=89 Identities=17% Similarity=0.312 Sum_probs=82.3
Q ss_pred cccHHHHHHHHHhhcccccCCCCCCHhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeee
Q 025093 164 LFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPV 243 (258)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l~~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PV 243 (258)
.+|+|||+.+++. ++++|.++++|+++++++++|++.+|+|+|+||.++++++.++++. ++++.+.+++|+++||
T Consensus 2 ~~t~~el~~li~~----~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~~~~pV 76 (156)
T 3oi8_A 2 NASAEDVLNLLRQ----AHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAHSRFPV 76 (156)
T ss_dssp CCCHHHHHHHHHH----HHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEE
T ss_pred CCCHHHHHHHHHh----HHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCCCEEEE
Confidence 3799999999984 4456999999999999999999999999999999999999999997 9999999999999999
Q ss_pred eeCCCCcEEEEEEe
Q 025093 244 YYEEPTNIIGLILV 257 (258)
Q Consensus 244 y~~~~D~IvGiv~~ 257 (258)
++++.|+++|+++.
T Consensus 77 vd~~~~~lvGivt~ 90 (156)
T 3oi8_A 77 IGEDKDEVLGILHA 90 (156)
T ss_dssp ESSSTTCEEEEEEG
T ss_pred EcCCCCcEEEEEEH
Confidence 98876799999973
No 2
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.59 E-value=5.1e-16 Score=126.57 Aligned_cols=89 Identities=22% Similarity=0.480 Sum_probs=48.7
Q ss_pred ccccHHHHHHHHHhhcccccCCCCCCHhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceee
Q 025093 163 ALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVP 242 (258)
Q Consensus 163 ~~~s~eEl~~lv~~~~~e~~~~g~l~~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~P 242 (258)
+.+|++||+.+++. +.++|.++++|+++++++++|++.+|+|+|+|+.++++++.++++. ++++.+.+++++++|
T Consensus 5 ~~~t~~el~~l~~~----~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~p 79 (172)
T 3lhh_A 5 DNVTQEDIQAMLQE----GSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPHSRFP 79 (172)
T ss_dssp ------------------------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCCSEEE
T ss_pred ccCCHHHHHHHHHH----HHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEE
Confidence 46899999999984 4566999999999999999999999999999999999999999997 999999999999999
Q ss_pred eeeCCCCcEEEEEE
Q 025093 243 VYYEEPTNIIGLIL 256 (258)
Q Consensus 243 Vy~~~~D~IvGiv~ 256 (258)
|++++.++++|+++
T Consensus 80 Vvd~~~~~lvGivt 93 (172)
T 3lhh_A 80 VCRNNVDDMVGIIS 93 (172)
T ss_dssp EESSSTTSEEEEEE
T ss_pred EEeCCCCeEEEEEE
Confidence 99877689999986
No 3
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.47 E-value=5e-14 Score=115.29 Aligned_cols=75 Identities=19% Similarity=0.297 Sum_probs=68.1
Q ss_pred cCCCCCCHhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEEe
Q 025093 182 GKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 182 ~~~g~l~~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~~ 257 (258)
.++|.++++|+++++++++|++.+|+++|+|+.++++++.++++. ++++.+.+++|+++||++++.++++|+++.
T Consensus 14 ~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~lvGivt~ 88 (173)
T 3ocm_A 14 PAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPHSFFPVCRGSLDEVVGIGRA 88 (173)
T ss_dssp ----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSCSEEEEESSSTTSEEEEEEH
T ss_pred HhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCCCEEEEEeCCCCCEEEEEEH
Confidence 345999999999999999999999999999999999999999997 999999999999999998877899999973
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.41 E-value=1.6e-13 Score=108.52 Aligned_cols=72 Identities=21% Similarity=0.451 Sum_probs=54.6
Q ss_pred CCCCCHhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 184 GGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 184 ~g~l~~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
+|.++++|++++++++++++.+|+|+|+||+++++++.++++. ++++.+.+++++++||++++.++++|+++
T Consensus 3 ~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~lvGivt 74 (148)
T 3lv9_A 3 AGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGVTRYPVCRKNKDDILGFVH 74 (148)
T ss_dssp ---------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCCSEEEEESSSTTSEEEEEE
T ss_pred CCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCCCEEEEEcCCCCcEEEEEE
Confidence 4899999999999999999999999999999999999999997 99999999999999999876689999986
No 5
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.22 E-value=7e-12 Score=111.62 Aligned_cols=72 Identities=11% Similarity=0.232 Sum_probs=66.6
Q ss_pred CCCCHhHHHHHHhhhcccc-ccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEEe
Q 025093 185 GELTHDETTIIAGALELTE-KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 185 g~l~~~E~~mi~~i~~~~~-~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~~ 257 (258)
+.++++|++|++++++|-+ ++|+|+|+||.++++++.++++. ++++.+.+++|+|+|||+++.|+++|+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~ 74 (334)
T 2qrd_G 2 MDVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNIVSAPLWDSEANKFAGLLTM 74 (334)
T ss_dssp CSHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSCEEEEETTTTEEEEEECH
T ss_pred CCCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCCeEEEEEeCCCCeEEEEEEH
Confidence 4567899999999999655 99999999999999999999997 999999999999999999988999999974
No 6
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.17 E-value=4.1e-12 Score=101.02 Aligned_cols=69 Identities=26% Similarity=0.436 Sum_probs=60.7
Q ss_pred CCHhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeee-eCCCCcEEEEEE
Q 025093 187 LTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVY-YEEPTNIIGLIL 256 (258)
Q Consensus 187 l~~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy-~~~~D~IvGiv~ 256 (258)
++++|+++++++++|++.+|+++|+||+++++++.++++. ++++.+.+++++++||+ +++.++++|+++
T Consensus 3 l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVv~d~~~~~lvGivt 72 (153)
T 3oco_A 3 ADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQYSRFPVTADNDKDKIIGYAY 72 (153)
T ss_dssp -----CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCCSEEEEEETTEEEEEEEEEE
T ss_pred cCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCCCEEEEEECCCCCcEEEEEE
Confidence 6778999999999999999999999999999999999997 99999999999999999 655689999986
No 7
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.15 E-value=9.3e-12 Score=110.31 Aligned_cols=74 Identities=12% Similarity=0.278 Sum_probs=69.7
Q ss_pred CCCCCCHhHHHHHHhhhcc-ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEEe
Q 025093 183 KGGELTHDETTIIAGALEL-TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 183 ~~g~l~~~E~~mi~~i~~~-~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~~ 257 (258)
+.|.++++|+++++++++| ++++++|+|+||.++++++.++++. ++++.+.+++++++||++++.++++|+++.
T Consensus 8 ~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~~~~pV~d~~~~~lvGilt~ 82 (323)
T 3t4n_C 8 SQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSIVSAPLWDSKTSRFAGLLTT 82 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTCSCEEEEETTTTEEEEEECH
T ss_pred CCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCCceEEEEeCCCCeEEEEEEH
Confidence 4478899999999999999 9999999999999999999999997 999999999999999999888999999863
No 8
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.06 E-value=7.9e-11 Score=94.52 Aligned_cols=62 Identities=19% Similarity=0.218 Sum_probs=55.2
Q ss_pred HHHHhhh-ccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 193 TIIAGAL-ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 193 ~mi~~i~-~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.||.+.| +|-..+++++||||+++++++.++|++ ++++.+.++||||+||+++ .++++|+++
T Consensus 3 ami~~~~e~~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~s~~pVvd~-~~~lvGiit 65 (156)
T 3k6e_A 3 AMIAKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTD-EKQFVGTIG 65 (156)
T ss_dssp HHHHHHHHHHHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSSSEEEEECC--CBEEEEEE
T ss_pred chHHHHHHHHhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCCcEEEEEcC-CCcEEEEEE
Confidence 3777777 477789999999999999999999997 9999999999999999975 478999986
No 9
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=98.98 E-value=2.1e-10 Score=101.97 Aligned_cols=71 Identities=8% Similarity=0.269 Sum_probs=60.2
Q ss_pred CCCCCCHhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 183 KGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 183 ~~g~l~~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
++|.+.+.+++.+++. |++++|+|+|+||.++++++.++++. ++++.+.+++|+++||++++.|+++|+++
T Consensus 16 ~~~~~~~~~~~~~~~~--l~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~~~~pV~d~~~~~~vGivt 86 (330)
T 2v8q_E 16 HSQETPESNSSVYTTF--MKSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGVRAAPLWDSKKQSFVGMLT 86 (330)
T ss_dssp -------CCSCHHHHH--HHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSEEEEEETTTTEEEEEEE
T ss_pred HhhhccchhhHHHHHH--HHcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCCcEEEEEeCCCCeEEEEEE
Confidence 4577888888888888 47899999999999999999999997 99999999999999999998899999997
No 10
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.86 E-value=1.3e-09 Score=84.12 Aligned_cols=53 Identities=23% Similarity=0.434 Sum_probs=49.5
Q ss_pred cccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 203 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 203 ~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
+.+|+|+|+|+.++++++.+++++ ++++.+.+++|+++||++++.++++|+++
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVv~~~~~~lvGivt 53 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPHGRIVLYRDSLDDAISMLR 53 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSSSEEEEESSSGGGEEEEEE
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCCCeEEEEcCCCCcEEEEEE
Confidence 468999999999999999999997 99999999999999999877789999986
No 11
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.86 E-value=1.7e-09 Score=83.21 Aligned_cols=56 Identities=39% Similarity=0.659 Sum_probs=50.7
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEEe
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~~ 257 (258)
.++.+|+|+|+|+.++++++.++++. ++++.+.+++++++||++++.++++|+++.
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~ 57 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAHSRFPVYEDDRDNIIGILLA 57 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCCSEEEEESSSTTCEEEEEEG
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCCCEEEEEcCCCCcEEEEEEH
Confidence 46889999999999999999999997 999999999999999998767899999873
No 12
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.83 E-value=1.2e-09 Score=84.07 Aligned_cols=56 Identities=27% Similarity=0.452 Sum_probs=48.5
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 200 ~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
+|++.+|+|+|+|+.++++++.++++. ++++.+.+++++++||++++.++++|+++
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt 57 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPFSRPLVYSEQKDNIIGFVH 57 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSCSCCEEESSSTTCEEEECC
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEeCCCCcEEEEEE
Confidence 478999999999999999999999997 99999999999999999887789999986
No 13
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.81 E-value=2.6e-09 Score=83.04 Aligned_cols=55 Identities=24% Similarity=0.483 Sum_probs=49.7
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEEe
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~~ 257 (258)
++.+|+++|+|+.++++++.++++. ++++.+.+++++++||++++.++++|+++.
T Consensus 1 ~~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~ 55 (136)
T 3lfr_A 1 ADLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAHSRYPVIGESHDDVLGVLLA 55 (136)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEG
T ss_pred CCCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEH
Confidence 4689999999999999999999997 999999999999999998866899999873
No 14
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.75 E-value=5.6e-09 Score=79.97 Aligned_cols=55 Identities=31% Similarity=0.600 Sum_probs=49.6
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEEe
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~~ 257 (258)
++.+|+|+|+|+.++++++.++++. ++++.+.+++++++||++++.++++|+++.
T Consensus 1 ~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~ 55 (127)
T 3nqr_A 1 ADQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAHSRFPVISEDKDHIEGILMA 55 (127)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEG
T ss_pred CCcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEH
Confidence 4689999999999999999999997 999999999999999998776899999873
No 15
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.68 E-value=3.1e-08 Score=93.11 Aligned_cols=86 Identities=16% Similarity=0.199 Sum_probs=74.6
Q ss_pred cccHHHHHHHHHhhcccccCC---------CCCCHhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHH
Q 025093 164 LFRRAELKTLVNLHGNEAGKG---------GELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLIL 234 (258)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~---------g~l~~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~ 234 (258)
.+++||+..+++.. .++ +.++++|++++++++++++.+|+++|+| ++++++.+++++ ++++.++
T Consensus 110 ~l~~dd~~~ll~~l----~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~ 182 (473)
T 2zy9_A 110 ELSLDDLADALQAV----RKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLR 182 (473)
T ss_dssp HSCHHHHHHHHHHH----HHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHH
T ss_pred hCCHHHHHHHHHhC----CHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHH
Confidence 46788888888743 223 6899999999999999999999999997 899999999997 9999999
Q ss_pred HcC-----CceeeeeeCCCCcEEEEEEe
Q 025093 235 EKG-----HSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 235 ~~~-----~SR~PVy~~~~D~IvGiv~~ 257 (258)
+++ ++++||++++ ++++|+++.
T Consensus 183 ~~~~~~~~~~~ipVvd~~-~~lvGiVt~ 209 (473)
T 2zy9_A 183 RAAPDAETIYYIYVVDEK-GRLKGVLSL 209 (473)
T ss_dssp HHGGGCSEEEEEEEECTT-SBEEEEEEH
T ss_pred hccCCcCceeEEEEECCC-CcEEEEEEH
Confidence 974 7999999875 889999973
No 16
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.68 E-value=7.9e-08 Score=80.42 Aligned_cols=68 Identities=6% Similarity=0.054 Sum_probs=61.7
Q ss_pred CCCHhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHc---CCceeeeeeCCCCcEEEEEEe
Q 025093 186 ELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEK---GHSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 186 ~l~~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~---~~SR~PVy~~~~D~IvGiv~~ 257 (258)
.++++|++++++++++++.+|+++|+| ++++++.++++. ++++.+.+. +++.+||.++ .++++|+++.
T Consensus 36 ~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~~~~~~~~~~Vvd~-~~~lvGivt~ 106 (205)
T 3kxr_A 36 QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRIELDCNDNLFIVDE-ADKYLGTVRR 106 (205)
T ss_dssp HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHCCCTTCCEEEEECT-TCBEEEEEEH
T ss_pred cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhhCccCeeEEEEEcC-CCeEEEEEEH
Confidence 378899999999999999999999998 799999999997 999999987 7889999975 4889999973
No 17
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.60 E-value=4.3e-08 Score=85.57 Aligned_cols=69 Identities=17% Similarity=0.228 Sum_probs=62.8
Q ss_pred CCCCHhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHc-----CCceeeeeeCCCCcEEEEEEe
Q 025093 185 GELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEK-----GHSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 185 g~l~~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~-----~~SR~PVy~~~~D~IvGiv~~ 257 (258)
|.++.++++++.+++++.+.+|+++|+| ++++++.+++++ ++++.+.++ +++++||++++ ++++|+++.
T Consensus 116 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~ 189 (278)
T 2yvy_A 116 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSL 189 (278)
T ss_dssp HHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHHHHTTTCSCSSEEEEECTT-CBEEEEEEH
T ss_pred HcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHHHccCCccceeEEEEECCC-CCEEEEEEH
Confidence 4688899999999999999999999998 899999999997 999999998 68999999865 889999974
No 18
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.44 E-value=1.3e-07 Score=74.63 Aligned_cols=60 Identities=18% Similarity=0.151 Sum_probs=53.6
Q ss_pred HHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 195 IAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 195 i~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
-.+..+|.+.+|+|+|+|+.++++++.++++. ++++.+.+++++++||++++ ++++|++.
T Consensus 6 ~~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit 65 (156)
T 3ctu_A 6 AKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIG 65 (156)
T ss_dssp HHHHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSSSEEEEECC--CBEEEEEE
T ss_pred cHHHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCCceEeEECCC-CEEEEEEc
Confidence 34556788899999999999999999999997 99999999999999999864 78999986
No 19
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.37 E-value=2.4e-07 Score=72.97 Aligned_cols=61 Identities=20% Similarity=0.256 Sum_probs=48.6
Q ss_pred HHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 194 IIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 194 mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
|.++...+.+.+|+++|+|+.++.+++.++++. ++++.+.+++++++||++++ ++++|++.
T Consensus 1 ~~~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt 61 (157)
T 2emq_A 1 MTWEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGYSAIPVLDTS-YKLHGLIS 61 (157)
T ss_dssp ---------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSSSEEEEECTT-CCEEEEEE
T ss_pred CchhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCceEEEEEcCC-CCEEEEee
Confidence 345667789999999999999999999999997 99999999999999999863 78999986
No 20
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.29 E-value=8.9e-07 Score=71.10 Aligned_cols=61 Identities=21% Similarity=0.347 Sum_probs=52.3
Q ss_pred hHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 190 DETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 190 ~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+++.+.+.+ ++.+|+|+|++ ++++++.++++. ++++.+.+++++++||.+++ ++++|++.
T Consensus 6 ~~~~~~~~~l--~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit 66 (170)
T 4esy_A 6 ARRRAIARAI--RQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQIGCAPVVDQN-GHLVGIIT 66 (170)
T ss_dssp HHHHHHHHHH--HTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTCSEEEEECTT-SCEEEEEE
T ss_pred HHHHHHHHHH--cCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCCeEEEEEcCC-ccEEEEEE
Confidence 4455666654 68999999986 789999999997 99999999999999999764 78999985
No 21
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.29 E-value=4.3e-07 Score=71.20 Aligned_cols=51 Identities=22% Similarity=0.270 Sum_probs=47.4
Q ss_pred ccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 204 ~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+|+|+|+|+.++.+++.++++. ++++.+.+++++++||++++ ++++|++.
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt 78 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNLGMTAICDDD-MNIIGIFT 78 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTSSEEEEECTT-CBEEEEEE
T ss_pred cCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CcEEEEec
Confidence 59999999999999999999997 99999999999999999754 78999986
No 22
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.26 E-value=4.1e-07 Score=86.00 Aligned_cols=81 Identities=16% Similarity=0.284 Sum_probs=66.2
Q ss_pred ccccHHHHHHHHHhhcccccCCCCC-----CHhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcC
Q 025093 163 ALFRRAELKTLVNLHGNEAGKGGEL-----THDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKG 237 (258)
Q Consensus 163 ~~~s~eEl~~lv~~~~~e~~~~g~l-----~~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~ 237 (258)
..+|++|+...+... +.-|.| .+++.++++++ ++++++|+ .++++++.+++++ ++++.+.+++
T Consensus 52 dtVTe~~ma~a~a~~----GGiGvI~~n~s~e~qa~~V~~V-----k~~~~~m~--~d~v~v~~~~tv~-ea~~~m~~~~ 119 (496)
T 4fxs_A 52 DTVTEARLAIALAQE----GGIGFIHKNMSIEQQAAQVHQV-----KIFEAGVV--THPVTVRPEQTIA-DVMELTHYHG 119 (496)
T ss_dssp TTTCSHHHHHHHHHH----TCEEEECSSSCHHHHHHHHHHH-----HHCCC--C--BCCCCBCSSSBHH-HHHHHHTSSC
T ss_pred chhhHHHHHHHHHHc----CCcceecCCCCHHHHHHHHHhc-----cccccccc--cCceEECCCCCHH-HHHHHHHHcC
Confidence 357899999888642 223555 67889999998 57789999 5889999999997 9999999999
Q ss_pred CceeeeeeCCCCcEEEEEE
Q 025093 238 HSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 238 ~SR~PVy~~~~D~IvGiv~ 256 (258)
||++||++++ |+++|+|+
T Consensus 120 ~s~~PVvd~~-~~lvGiVt 137 (496)
T 4fxs_A 120 FAGFPVVTEN-NELVGIIT 137 (496)
T ss_dssp CCEEEEECSS-SBEEEEEE
T ss_pred CcEEEEEccC-CEEEEEEE
Confidence 9999999875 89999986
No 23
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.23 E-value=3.7e-07 Score=71.37 Aligned_cols=57 Identities=21% Similarity=0.293 Sum_probs=51.5
Q ss_pred hhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 198 ALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 198 i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.-.|.+.+|+++|+|+.++.+++.++++. ++++.+.+++++++||++++ ++++|++.
T Consensus 9 ~~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~pVvd~~-~~~~Givt 65 (150)
T 3lqn_A 9 KDEFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGYSAIPVLDPM-YKLHGLIS 65 (150)
T ss_dssp HHHHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEE
T ss_pred HHhhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCCcEEEEECCC-CCEEEEEE
Confidence 34578899999999999999999999997 99999999999999999764 78999986
No 24
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.22 E-value=8.9e-07 Score=70.04 Aligned_cols=55 Identities=20% Similarity=0.324 Sum_probs=50.1
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 200 ~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
++.+.+|+++|+|+.++.+++.++++. ++++.+.+++++++||++++ ++++|++.
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt 64 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGYTAIPVLDPS-YRLHGLIG 64 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEE
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CCEEEEeE
Confidence 678899999999999999999999997 99999999999999999764 58999986
No 25
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.18 E-value=1.5e-06 Score=67.59 Aligned_cols=53 Identities=23% Similarity=0.364 Sum_probs=48.7
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
+..+|+|+|+|+.++++++.++++. ++++.+.+++++++||++++ ++++|++.
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt 55 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRITGFPVIDED-WKLVGLVS 55 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEE
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCCceEEEEeCC-CeEEEEEE
Confidence 4578999999999999999999997 99999999999999999864 78999986
No 26
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.18 E-value=1e-06 Score=74.87 Aligned_cols=53 Identities=19% Similarity=0.241 Sum_probs=48.3
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEEe
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~~ 257 (258)
.+.+|+|+|+| .++.+++.+++++ ++++.+.+++++++||++++ ++++|+++.
T Consensus 183 ~~~~v~~im~~-~~~~~~~~~~~~~-~~~~~m~~~~~~~~pVvd~~-~~~~Giit~ 235 (245)
T 3l2b_A 183 QSLPVDYVMTK-DNLVAVSTDDLVE-DVKVTMSETRYSNYPVIDEN-NKVVGSIAR 235 (245)
T ss_dssp GGSBHHHHSBC-TTCCCEETTSBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEEC
T ss_pred cCCceeeEecC-CccEEECCCCcHH-HHHHHHHhcCCceEEEEcCC-CeEEEEEEH
Confidence 46789999999 8899999999997 99999999999999999765 889999974
No 27
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.18 E-value=3.2e-06 Score=74.03 Aligned_cols=69 Identities=25% Similarity=0.289 Sum_probs=62.3
Q ss_pred CCCCHhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHc-----CCceeeeeeCCCCcEEEEEEe
Q 025093 185 GELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEK-----GHSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 185 g~l~~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~-----~~SR~PVy~~~~D~IvGiv~~ 257 (258)
+.++.+|+..+.+++.+.+.+|+++|+| ++++++.++++. ++++.+.++ +++++||++++ ++++|+|+.
T Consensus 118 ~~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~pVvd~~-~~lvGivt~ 191 (286)
T 2oux_A 118 SLLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQADMAETIYYVYVVDQE-NHLVGVISL 191 (286)
T ss_dssp HTSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHHCSSCSCCSEEEEECTT-CBEEEEEEH
T ss_pred HcCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHcccCccceeEEEEEcCC-CeEEEEEEH
Confidence 3578889999999999999999999997 789999999997 999999998 89999999864 789999973
No 28
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.14 E-value=1.8e-06 Score=81.21 Aligned_cols=81 Identities=14% Similarity=0.221 Sum_probs=67.1
Q ss_pred cccHHHHHHHHHhhcccccCCCCCC-----HhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCC
Q 025093 164 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 238 (258)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l~-----~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~ 238 (258)
.+|++|+...+... +..|.+. +++++++++++++ +++|+| ++++++.+++++ ++++.+.++++
T Consensus 54 ~vt~~eLa~av~~~----Gg~G~i~~~~~~e~~~~~i~~v~~~-----~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~ 121 (491)
T 1zfj_A 54 TVTGSKMAIAIARA----GGLGVIHKNMSITEQAEEVRKVKRS-----ENGVII--DPFFLTPEHKVS-EAEELMQRYRI 121 (491)
T ss_dssp TTCSHHHHHHHHHT----TCEEEECCSSCHHHHHHHHHHHHHH-----TTTTSS--SCCCBCSSSBHH-HHHHHHHHTTC
T ss_pred hccHHHHHHHHHHc----CCceEEeCCCCHHHHHHHHHHHhhH-----HhcCcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 46889999988743 2234555 7889999998865 679997 888999999997 99999999999
Q ss_pred ceeeeeeC-CCCcEEEEEE
Q 025093 239 SRVPVYYE-EPTNIIGLIL 256 (258)
Q Consensus 239 SR~PVy~~-~~D~IvGiv~ 256 (258)
+++||+++ +.|+++|+|+
T Consensus 122 ~~~pVvd~~~~~~lvGivt 140 (491)
T 1zfj_A 122 SGVPIVETLANRKLVGIIT 140 (491)
T ss_dssp SEEEEESCTTTCBEEEEEE
T ss_pred CEEEEEEeCCCCEEEEEEE
Confidence 99999983 4589999986
No 29
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=98.09 E-value=9.8e-07 Score=75.65 Aligned_cols=82 Identities=17% Similarity=0.273 Sum_probs=61.8
Q ss_pred cccHHHHHHHHHhhcccccCCCCCCHhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeee
Q 025093 164 LFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPV 243 (258)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l~~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PV 243 (258)
.+|.+|+...+.. +...+.++. ....++++..+.+|+++|+| ++.+++.++++. ++++.+.+++++++||
T Consensus 51 ivt~~di~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~V 120 (280)
T 3kh5_A 51 IITSMDIVDFMGG----GSKYNLIRE---KHERNFLAAINEPVREIMEE--NVITLKENADID-EAIETFLTKNVGGAPI 120 (280)
T ss_dssp EEEHHHHHHHTTT----SGGGHHHHT---TSTTCHHHHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTCSEEEE
T ss_pred EEEHHHHHHHhcc----cchhhhhhh---ccccchhHHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCCCEEEE
Confidence 5789999887642 111121111 11344555668999999997 788999999997 9999999999999999
Q ss_pred eeCCCCcEEEEEE
Q 025093 244 YYEEPTNIIGLIL 256 (258)
Q Consensus 244 y~~~~D~IvGiv~ 256 (258)
++++ ++++|+++
T Consensus 121 vd~~-~~~~Givt 132 (280)
T 3kh5_A 121 VNDE-NQLISLIT 132 (280)
T ss_dssp ECTT-CBEEEEEE
T ss_pred EcCC-CEEEEEEE
Confidence 9764 88999986
No 30
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.06 E-value=8.6e-07 Score=86.14 Aligned_cols=53 Identities=19% Similarity=0.205 Sum_probs=49.3
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHH-HcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLIL-EKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~-~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
++.+|+|+|+||+++.+++.|++++ |+.+.+. +++|+++||+|+ .|+++|+++
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~~~~PVvd~-~~~lvGiVt 504 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNRLVFPVIDA-NGYLLGAIS 504 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTCCEECBBCT-TCBBCCEES
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCcceEEEEec-CCeEEEEEE
Confidence 7889999999999999999999997 9999999 799999999987 478999985
No 31
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.02 E-value=4.6e-06 Score=65.75 Aligned_cols=60 Identities=12% Similarity=0.268 Sum_probs=48.3
Q ss_pred HHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeC-CCCcEEEEEE
Q 025093 194 IIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYE-EPTNIIGLIL 256 (258)
Q Consensus 194 mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~-~~D~IvGiv~ 256 (258)
+..+.+++.+.+|+|+|+| ++.+++.++++. ++++.+.+++++++||+++ +.++++|++.
T Consensus 3 l~~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pVvd~~~~~~~~Givt 63 (164)
T 2pfi_A 3 ILGRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDVTEYPLVESTESQILVGIVQ 63 (164)
T ss_dssp -------CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCCSEEEEESCTTTCBEEEEEE
T ss_pred CccccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCCCceeEEecCCCCEEEEEEE
Confidence 3445667889999999997 788899999997 9999999999999999986 3578999986
No 32
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.01 E-value=3.1e-06 Score=64.80 Aligned_cols=49 Identities=12% Similarity=0.167 Sum_probs=45.6
Q ss_pred ccccccccc-ceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 205 TASDAMTPI-AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 205 ~v~eiM~PR-~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
+|+|+|+|| .++.+++.++++. ++++.+.+++++++||++ .++++|++.
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd--~~~~~Givt 56 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNIGALLVMK--DEKLVGILT 56 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTCSEEEEEE--TTEEEEEEE
T ss_pred eHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCCCEEEEEE--CCEEEEEEe
Confidence 899999998 8999999999997 999999999999999997 378999986
No 33
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.99 E-value=4.3e-06 Score=66.59 Aligned_cols=58 Identities=9% Similarity=0.093 Sum_probs=52.2
Q ss_pred hhhcccccccccccccc-ceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 197 GALELTEKTASDAMTPI-AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 197 ~i~~~~~~~v~eiM~PR-~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
+...+...+|+|+|+|+ .++.+++.++++. ++++.+.+++++++||++++ ++++|++.
T Consensus 17 ~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt 75 (165)
T 3fhm_A 17 LYFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKIGAVVVTDAD-GVVLGIFT 75 (165)
T ss_dssp CCCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEE
T ss_pred hhHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEE
Confidence 55678889999999997 7899999999997 99999999999999999854 78999986
No 34
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=97.97 E-value=9.1e-06 Score=62.31 Aligned_cols=54 Identities=15% Similarity=0.232 Sum_probs=48.0
Q ss_pred hccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 199 LELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 199 ~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
+.|++.+|+++|++ ++.+++.++++. ++++.+.+++++.+||++++ ++++|++.
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt 55 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDVGSLVVINDD-GNVVGFFT 55 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEE
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEe
Confidence 46889999999984 788999999997 99999999999999999853 78999986
No 35
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=97.97 E-value=3.7e-06 Score=73.05 Aligned_cols=78 Identities=15% Similarity=0.251 Sum_probs=62.1
Q ss_pred cccHHHHHHHHHhhcccccCCCCCCHhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeee
Q 025093 164 LFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPV 243 (258)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l~~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PV 243 (258)
.+|.+||...+.. +.+ ..+...+.+++.+.+|+++|+| ++++++.++++. ++++.+.+++++++||
T Consensus 64 ivT~~Di~~~~~~----~~~-------~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpV 129 (296)
T 3ddj_A 64 LLTTRDLLSTVES----YCK-------DSCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNFGSLPV 129 (296)
T ss_dssp EEEHHHHHGGGTT----CC----------CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTCSEEEE
T ss_pred EEeHHHHHHHhcc----ccc-------ccccchhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCCCEEEE
Confidence 5688888876641 110 1345667778889999999997 678999999997 9999999999999999
Q ss_pred eeCCCCcEEEEEE
Q 025093 244 YYEEPTNIIGLIL 256 (258)
Q Consensus 244 y~~~~D~IvGiv~ 256 (258)
++++ ++++|+++
T Consensus 130 vd~~-~~lvGivt 141 (296)
T 3ddj_A 130 VDIN-DKPVGIVT 141 (296)
T ss_dssp ECTT-SCEEEEEE
T ss_pred EcCC-CcEEEEEe
Confidence 9754 78999986
No 36
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.97 E-value=3.8e-06 Score=67.68 Aligned_cols=54 Identities=22% Similarity=0.410 Sum_probs=47.9
Q ss_pred ccccccccccccce--EEEE--eCCCCccHHHHHHHHHcCCceeeeee-CCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAE--TFAI--DINAKLDKELMNLILEKGHSRVPVYY-EEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~--v~~l--~~~~~~~~e~~~~~~~~~~SR~PVy~-~~~D~IvGiv~ 256 (258)
++.+|+|+|+|+.+ +.++ +.++++. ++++.+.+++++++||++ ++.++++|++.
T Consensus 9 ~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~~~~pVv~~d~~~~lvGiit 67 (185)
T 2j9l_A 9 HKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTYSGFPVVVSRESQRLVGFVL 67 (185)
T ss_dssp CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEE
T ss_pred ccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCCCceeEEEECCCCeEEEEEE
Confidence 67899999999866 7778 9999997 999999999999999995 45578999986
No 37
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=97.92 E-value=1.2e-05 Score=63.51 Aligned_cols=56 Identities=20% Similarity=0.260 Sum_probs=50.1
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCC--cEEEEEE
Q 025093 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPT--NIIGLIL 256 (258)
Q Consensus 200 ~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D--~IvGiv~ 256 (258)
...+.+++++|+|+.++.+++.++++. ++++.+.+++++++||.+++.+ +++|++.
T Consensus 77 ~~~~~~v~~~m~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit 134 (159)
T 3fv6_A 77 ELTSVPVHIIMTRMPNITVCRREDYVM-DIAKHLIEKQIDALPVIKDTDKGFEVIGRVT 134 (159)
T ss_dssp CTTTCBGGGTSEETTSCCCBCTTSBHH-HHHHHHHHHTCSEEEEEEECSSSEEEEEEEE
T ss_pred cccCcCHHHHHcCCCCcEEECCCCCHH-HHHHHHHHcCCcEEEEEeCCCcceeEEEEEE
Confidence 457789999999988999999999997 9999999999999999987533 8999986
No 38
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=97.91 E-value=1.4e-05 Score=60.82 Aligned_cols=51 Identities=22% Similarity=0.376 Sum_probs=46.0
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
+++.+|+++|+| ++.+++.++++. ++++.+.+++++++||++ .++++|++.
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd--~~~~~Givt 51 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNIGSVIVVD--GNKPVGIIT 51 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTCSEEEEEE--TTEEEEEEE
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCCCEEEEEE--CCEEEEEEc
Confidence 468899999998 588899999997 999999999999999998 378999986
No 39
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.90 E-value=2.9e-06 Score=79.93 Aligned_cols=80 Identities=14% Similarity=0.246 Sum_probs=24.7
Q ss_pred cccHHHHHHHHHhhcccccCCCCCC-----HhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCC
Q 025093 164 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 238 (258)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l~-----~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~ 238 (258)
.+|++|+...+... +..|.+. +++++++++++++++ +|+ .++++++.+++++ ++++.+.+++|
T Consensus 57 ~vt~~ela~ava~~----GglG~i~~~~~~e~~~~~I~~v~~~~~-----~m~--~~~~~v~~~~tv~-ea~~~~~~~~~ 124 (486)
T 2cu0_A 57 TVTEWEMAVAMARE----GGLGVIHRNMGIEEQVEQVKRVKRAER-----LIV--EDVITIAPDETVD-FALFLMEKHGI 124 (486)
T ss_dssp TTCSHHHHHHHHHT----TCEEEECSSSCHHHHHHHHHHHHTCC------------------------------------
T ss_pred eecHHHHHHHHHhc----CCceeecCCCCHHHHHHHHHhhcchhh-----ccc--cCceEECCCCCHH-HHHHHHHHcCC
Confidence 46788998888632 2224453 678999999998755 687 5899999999997 99999999999
Q ss_pred ceeeeeeCCCCcEEEEEEe
Q 025093 239 SRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 239 SR~PVy~~~~D~IvGiv~~ 257 (258)
+++||+++ |+++|+|+.
T Consensus 125 ~~~pVvd~--~~lvGivt~ 141 (486)
T 2cu0_A 125 DGLPVVED--EKVVGIITK 141 (486)
T ss_dssp -------------------
T ss_pred cEEEEEEC--CEEEEEEEH
Confidence 99999987 999999874
No 40
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=97.87 E-value=1.6e-05 Score=60.88 Aligned_cols=52 Identities=23% Similarity=0.356 Sum_probs=46.6
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
|.+.+|+++|+| ++.+++.++++. ++++.+.+++++++||++++ ++++|++.
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt 56 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKISSLPVIDDE-NKVIGIVT 56 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTCCEEEEECTT-CBEEEEEE
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCCcEEEEECCC-CeEEEEEE
Confidence 568899999986 788899999997 99999999999999999864 78999986
No 41
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=97.86 E-value=1.5e-05 Score=61.47 Aligned_cols=50 Identities=8% Similarity=0.147 Sum_probs=44.7
Q ss_pred ccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCC-CCcEEEEEE
Q 025093 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE-PTNIIGLIL 256 (258)
Q Consensus 204 ~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~-~D~IvGiv~ 256 (258)
.+|+|+|+| ++.+++.++++. ++++.+.+++++++||++++ .|+++|+++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt 55 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIR-EVATELAKNRVGLAVLTARDNPKRPVAVVS 55 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTCSEEEEEETTEEEEEEEEEE
T ss_pred eEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCCCEEEEEcCCCcceeEEEEE
Confidence 689999996 788999999997 99999999999999999875 348999986
No 42
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.78 E-value=5.8e-06 Score=78.21 Aligned_cols=81 Identities=9% Similarity=0.153 Sum_probs=21.9
Q ss_pred cccHHHHHHHHHhhcccccCCCCC-----CHhHHHHHHhhhcccccccccc-ccccceEEEEeCCCCccHHHHHHHHHcC
Q 025093 164 LFRRAELKTLVNLHGNEAGKGGEL-----THDETTIIAGALELTEKTASDA-MTPIAETFAIDINAKLDKELMNLILEKG 237 (258)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l-----~~~E~~mi~~i~~~~~~~v~ei-M~PR~~v~~l~~~~~~~~e~~~~~~~~~ 237 (258)
.+|++++...+...+ ..|.+ .+++.+++.++.. .|+ |+| ++++++.++++. ++++.+.+++
T Consensus 61 ~vt~~~la~~la~~g----g~G~I~~~~~~e~~~~~v~~V~~------~e~gM~~--~~~~v~~~~tv~-eal~~m~~~~ 127 (503)
T 1me8_A 61 SVSGEKMAIALAREG----GISFIFGSQSIESQAAMVHAVKN------FKAGFVV--SDSNVKPDQTFA-DVLAISQRTT 127 (503)
T ss_dssp TTCSHHHHHHHHHTT----CEEEECCSSCHHHHHHHHHHHHT------TTC-----------------------------
T ss_pred hhhHHHHHHHHHhCC----CcceeeCCCCHHHHHHHHhhhhh------cccCccc--CCeEECCCCcHH-HHHHHHHHcC
Confidence 467899988876321 11222 2577888877664 356 998 899999999997 9999999999
Q ss_pred CceeeeeeCC--CCcEEEEEEe
Q 025093 238 HSRVPVYYEE--PTNIIGLILV 257 (258)
Q Consensus 238 ~SR~PVy~~~--~D~IvGiv~~ 257 (258)
||++||++++ .|+++|+|+.
T Consensus 128 ~s~~pVvd~~~~~g~lvGiVt~ 149 (503)
T 1me8_A 128 HNTVAVTDDGTPHGVLLGLVTQ 149 (503)
T ss_dssp ----------------------
T ss_pred ceEEEEEECCCcCCeEEEEEEH
Confidence 9999999876 4899999863
No 43
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=97.76 E-value=3e-05 Score=58.10 Aligned_cols=52 Identities=23% Similarity=0.287 Sum_probs=47.1
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 200 ~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
++.+.+++++|.| ++.+++.++++. ++++.+.+++++++||.++ ++++|++.
T Consensus 61 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~--~~~~Gvit 112 (125)
T 1pbj_A 61 DLAEVKVWEVMER--DLVTISPRATIK-EAAEKMVKNVVWRLLVEED--DEIIGVIS 112 (125)
T ss_dssp CTTTSBHHHHCBC--GGGEECTTSCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEE
T ss_pred cccccCHHHHcCC--CCeEECCCCCHH-HHHHHHHhcCCcEEEEEEC--CEEEEEEE
Confidence 4568899999997 678899999997 9999999999999999987 89999986
No 44
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=97.76 E-value=1.6e-05 Score=62.39 Aligned_cols=50 Identities=18% Similarity=0.300 Sum_probs=45.6
Q ss_pred cccccccccc----ceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 204 KTASDAMTPI----AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 204 ~~v~eiM~PR----~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
++|+|+|+|+ .++.+++.++++. ++++.+.+++++++||.+ .++++|++.
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~V~~--~~~~~Givt 60 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGIGALLVVD--GDDIAGIVT 60 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTCSEEEEES--SSSEEEEEE
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCCCEEEEee--CCEEEEEEE
Confidence 6899999998 8999999999997 999999999999999953 578999986
No 45
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=97.75 E-value=3.8e-05 Score=58.58 Aligned_cols=52 Identities=25% Similarity=0.422 Sum_probs=46.6
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 200 ~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
+..+.+++++|.| +..+++.++++. ++++.+.+++++++||.+ + ++++|++.
T Consensus 70 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit 121 (135)
T 2rc3_A 70 PVKDTQVKEIMTR--QVAYVDLNNTNE-DCMALITEMRVRHLPVLD-D-GKVIGLLS 121 (135)
T ss_dssp CGGGSBGGGTSBC--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEE
T ss_pred CcccCCHHHhccC--CCeEECCCCcHH-HHHHHHHHhCCCEEEEEe-C-CEEEEEEE
Confidence 3568899999997 678899999997 999999999999999998 3 78999986
No 46
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=97.74 E-value=3.6e-05 Score=60.75 Aligned_cols=51 Identities=12% Similarity=0.160 Sum_probs=45.1
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
+++.+|+|+|++ . ++++.++++. ++++.+.+++++++||++++ ++++|++.
T Consensus 14 l~~~~v~~im~~--~-~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt 64 (159)
T 3fv6_A 14 LKKLQVKDFQSI--P-VVIHENVSVY-DAICTMFLEDVGTLFVVDRD-AVLVGVLS 64 (159)
T ss_dssp HTTCBGGGSCBC--C-CEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEE
T ss_pred HhhCCHHHHcCC--C-EEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CcEEEEEe
Confidence 467899999996 3 4899999997 99999999999999999854 78999986
No 47
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.72 E-value=8e-06 Score=68.22 Aligned_cols=84 Identities=14% Similarity=0.173 Sum_probs=59.5
Q ss_pred ccHHHHHHHHHhhcccccCCCCCCHhHHHHHHhhhccccc-------cccccccccceEEEEeCCCCccHHHHHHHHHcC
Q 025093 165 FRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEK-------TASDAMTPIAETFAIDINAKLDKELMNLILEKG 237 (258)
Q Consensus 165 ~s~eEl~~lv~~~~~e~~~~g~l~~~E~~mi~~i~~~~~~-------~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~ 237 (258)
.|-+|...++..++ .++..--++...+.+++..+|. +|+++|+| ++.+++.++++. ++.+.+.+++
T Consensus 30 ~tv~ea~~~m~~~~----~~~~pVvd~~~~l~Givt~~dl~~~~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~ 102 (213)
T 1vr9_A 30 ATVRECLHRMRQYQ----TNECIVKDREGHFRGVVNKEDLLDLDLDSSVFNKVSL--PDFFVHEEDNIT-HALLLFLEHQ 102 (213)
T ss_dssp CBHHHHHHHHHHTT----SSEEEEECTTSBEEEEEEGGGGTTSCTTSBSGGGCBC--TTCCEETTSBHH-HHHHHHHHCC
T ss_pred CcHHHHHHHHHHCC----CCEEEEEcCCCEEEEEEEHHHHHhhcCCCcHHHHccC--CCEEECCCCcHH-HHHHHHHHhC
Confidence 45677777776321 1121111112234555555554 69999998 678899999997 9999999999
Q ss_pred CceeeeeeCCCCcEEEEEE
Q 025093 238 HSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 238 ~SR~PVy~~~~D~IvGiv~ 256 (258)
++++||.+++ ++++|+++
T Consensus 103 ~~~lpVvd~~-g~lvGiit 120 (213)
T 1vr9_A 103 EPYLPVVDEE-MRLKGAVS 120 (213)
T ss_dssp CSEEEEECTT-CBEEEEEE
T ss_pred CCEEEEEcCC-CEEEEEEE
Confidence 9999999864 78999986
No 48
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.71 E-value=2.9e-05 Score=73.57 Aligned_cols=81 Identities=14% Similarity=0.225 Sum_probs=59.1
Q ss_pred cccHHHHHHHHHhhcccccCCCCCC-----HhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCC
Q 025093 164 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 238 (258)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l~-----~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~ 238 (258)
.+|++++...+...+ .-|.+. +++.+++.++.. .+++|++ +.++++.+++++ ++++.+.+++|
T Consensus 77 tvTe~~lAia~a~~G----giGvIh~~~~~~~q~~~V~~V~~-----~~~~m~~--d~v~l~~~~tv~-ea~~~m~~~~~ 144 (511)
T 3usb_A 77 TVTEADMAIAMARQG----GLGIIHKNMSIEQQAEQVDKVKR-----SESGVIS--DPFFLTPEHQVY-DAEHLMGKYRI 144 (511)
T ss_dssp TTCSHHHHHHHHHHT----CEEEECSSSCHHHHHHHHHHHHT-----SSSCSSS--SCCCBCTTSBHH-HHHHHHHHHCC
T ss_pred hhcHHHHHHHHHhcC----CceeecccCCHHHHHHHHHHhhc-----ccccccc--CCEEECCCCCHH-HHHHHHHHcCC
Confidence 568999987776321 124343 344555666653 4455554 788999999997 99999999999
Q ss_pred ceeeeeeCC-CCcEEEEEE
Q 025093 239 SRVPVYYEE-PTNIIGLIL 256 (258)
Q Consensus 239 SR~PVy~~~-~D~IvGiv~ 256 (258)
|++||++++ .|+++|+|+
T Consensus 145 s~~pVvd~g~~~~lvGiVt 163 (511)
T 3usb_A 145 SGVPVVNNLDERKLVGIIT 163 (511)
T ss_dssp SEEEEESCTTTCBEEEEEE
T ss_pred cEEEEEecCCCCEEEEEEE
Confidence 999999862 489999987
No 49
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=97.71 E-value=3.8e-05 Score=58.19 Aligned_cols=50 Identities=12% Similarity=0.108 Sum_probs=45.3
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+|+++|++. ..+++.++++. ++++.+.+++++++||+++ ++++|++.
T Consensus 3 ~s~~v~~~m~~~--~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~--~~~~Givt 52 (128)
T 3gby_A 3 ASVTFSYLAETD--YPVFTLGGSTA-DAARRLAASGCACAPVLDG--ERYLGMVH 52 (128)
T ss_dssp TTCBGGGGCBCC--SCCEETTSBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEE
T ss_pred cceEHHHhhcCC--cceECCCCCHH-HHHHHHHHCCCcEEEEEEC--CEEEEEEE
Confidence 467999999864 78899999997 9999999999999999987 89999986
No 50
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=97.70 E-value=3.9e-05 Score=60.15 Aligned_cols=51 Identities=25% Similarity=0.343 Sum_probs=46.2
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
..+.+++++|+| +..+++.++++. ++++.+.+++++++||.++ ++++|+++
T Consensus 75 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~--g~~~Giit 125 (157)
T 4fry_A 75 SKATRVEEIMTA--KVRYVEPSQSTD-ECMALMTEHRMRHLPVLDG--GKLIGLIS 125 (157)
T ss_dssp SSSCBHHHHSBS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEE
T ss_pred ccccCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEE
Confidence 468899999997 678899999997 9999999999999999983 89999986
No 51
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.70 E-value=3.2e-05 Score=60.85 Aligned_cols=52 Identities=19% Similarity=0.383 Sum_probs=47.1
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCce-eeeeeCCCCcEEEEEE
Q 025093 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSR-VPVYYEEPTNIIGLIL 256 (258)
Q Consensus 200 ~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR-~PVy~~~~D~IvGiv~ 256 (258)
.+++.+|+++|++ ++.+++.++++. ++++.+.++++++ +||++++ +++|++.
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~~~~~~Vvd~~--~~vGivt 64 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPVTRTVYVARDN--KLVGMIP 64 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTTCCEEEEEETT--EEEEEEE
T ss_pred hhccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCCCccEEEEECC--EEEEEEE
Confidence 4577899999986 789999999997 9999999999999 9999876 9999986
No 52
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=97.70 E-value=2.2e-05 Score=58.67 Aligned_cols=49 Identities=14% Similarity=0.350 Sum_probs=43.8
Q ss_pred ccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 204 ~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
++|+++|+| ++.+++.++++. ++++.+.+++++++||++++ ++++|++.
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt 49 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNINHLPIVDEH-GKLVGIIT 49 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTCSCEEEECTT-SBEEEEEC
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CCEEEEEE
Confidence 478999997 688899999997 99999999999999999854 78999985
No 53
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=97.66 E-value=4.9e-05 Score=65.47 Aligned_cols=54 Identities=13% Similarity=0.195 Sum_probs=47.5
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCC-CcEEEEEE
Q 025093 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEP-TNIIGLIL 256 (258)
Q Consensus 200 ~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~-D~IvGiv~ 256 (258)
...+.+|+|+|++ +++++..++++. ++.+++.+++|+++||.+++. +.++|+|.
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~-~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt 63 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYG-DLLHVLRQTKLKFFPFVDTPDTNTLLGSID 63 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEE
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEecCCCCeEEEEEE
Confidence 4567899999986 799999999997 999999999999999998753 56999985
No 54
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=97.63 E-value=4.3e-05 Score=60.45 Aligned_cols=51 Identities=16% Similarity=0.247 Sum_probs=45.5
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+|+++|+| ++.+++.++++. ++++.+.+++++++||++++ +.++|++.
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt 53 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDIRHVPIVDAN-KKLLGIVS 53 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEE
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEe
Confidence 46789999987 788899999997 99999999999999999854 78999986
No 55
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.60 E-value=3e-05 Score=58.93 Aligned_cols=52 Identities=17% Similarity=0.295 Sum_probs=44.2
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
+.-++|+++|++ ++.+++.++++. ++++.+.+++++++||++++ ++++|++.
T Consensus 5 ~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt 56 (133)
T 1y5h_A 5 FTMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDIGALPICGDD-DRLHGMLT 56 (133)
T ss_dssp ---CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTCSEEEEECGG-GBEEEEEE
T ss_pred hhhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCCCeEEEECCC-CeEEEEEe
Confidence 345799999986 788899999997 99999999999999999754 78999986
No 56
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=97.60 E-value=9e-05 Score=55.25 Aligned_cols=51 Identities=20% Similarity=0.300 Sum_probs=44.8
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
...+++++|.| +...++.++++. ++++.+.+++++++||++++ ++++|++.
T Consensus 60 ~~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Givt 110 (122)
T 3kpb_A 60 NKKTIEEIMTR--NVITAHEDEPVD-HVAIKMSKYNISGVPVVDDY-RRVVGIVT 110 (122)
T ss_dssp TCCBGGGTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEE
T ss_pred cccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCCeEEEECCC-CCEEEEEe
Confidence 34589999987 678899999997 99999999999999999764 78999986
No 57
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.59 E-value=6.3e-05 Score=57.67 Aligned_cols=53 Identities=11% Similarity=0.200 Sum_probs=46.0
Q ss_pred ccccccccc---cccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 200 ELTEKTASD---AMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 200 ~~~~~~v~e---iM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
++-++++++ +|+ .++.+++.++++. ++++.+.+++++++||++++ ++++|++.
T Consensus 4 ~~~~~~v~~~~~~~~--~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt 59 (144)
T 2nyc_A 4 HFLKIPIGDLNIITQ--DNMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYE 59 (144)
T ss_dssp GGGGSBGGGSSCCBC--SSCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEE
T ss_pred chhhcchhhcCCCCC--CCceEECCCCcHH-HHHHHHHHcCcceeeEEcCC-CcEEEEEc
Confidence 456788999 665 5789999999997 99999999999999999865 78999986
No 58
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.58 E-value=9.5e-05 Score=58.63 Aligned_cols=52 Identities=25% Similarity=0.325 Sum_probs=46.9
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 200 ~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
...+.+++++|.+ ++.+++.++++. ++++.+.+++++++||.++ ++++|++.
T Consensus 89 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~~~Giit 140 (165)
T 3fhm_A 89 ASLQQSVSVAMTK--NVVRCQHNSTTD-QLMEIMTGGRFRHVPVEEN--GRLAGIIS 140 (165)
T ss_dssp GGGTSBGGGTSBS--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEE
T ss_pred ccccCCHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEE
Confidence 4567899999994 678899999997 9999999999999999987 89999986
No 59
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=97.56 E-value=0.00016 Score=58.48 Aligned_cols=62 Identities=16% Similarity=0.258 Sum_probs=51.2
Q ss_pred HHHHHHhhh----ccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 191 ETTIIAGAL----ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 191 E~~mi~~i~----~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
++++++... ...+.+++++|.| +..+++.++++. ++++.+.+++++++||.+++ ++++|++.
T Consensus 58 ~~dl~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Givt 123 (184)
T 1pvm_A 58 ERSIIKRFIPRNKKPDEVPIRLVMRK--PIPKVKSDYDVK-DVAAYLSENGLERCAVVDDP-GRVVGIVT 123 (184)
T ss_dssp HHHHHHHTGGGCCCGGGSBGGGTSBS--SCCEEETTCBHH-HHHHHHHHHTCSEEEEECTT-CCEEEEEE
T ss_pred HHHHHHHHhhcccCcccCCHHHHhCC--CCcEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEE
Confidence 344555544 3567899999997 678899999997 99999999999999999764 78999986
No 60
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.55 E-value=6.3e-05 Score=57.09 Aligned_cols=51 Identities=27% Similarity=0.492 Sum_probs=46.2
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
..+.+++++|.| +..+++.++++. ++++.+.+++++++||.++ ++++|++.
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~--g~~~Giit 121 (133)
T 1y5h_A 71 PNTATAGELARD--SIYYVDANASIQ-EMLNVMEEHQVRRVPVISE--HRLVGIVT 121 (133)
T ss_dssp TTTSBHHHHHTT--CCCCEETTCCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEE
T ss_pred ccccCHHHHhcC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEE
Confidence 457899999997 778899999997 9999999999999999987 79999986
No 61
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.55 E-value=8.8e-05 Score=58.25 Aligned_cols=52 Identities=25% Similarity=0.447 Sum_probs=46.3
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 200 ~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
...+.+++++|.| +.+++.++++. ++++.+.+++++++||.+++ ++++|++.
T Consensus 92 ~~~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit 143 (157)
T 1o50_A 92 RLIAKNASEIMLD---PVYVHMDTPLE-EALKLMIDNNIQEMPVVDEK-GEIVGDLN 143 (157)
T ss_dssp CCSSCBHHHHCBC---CCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEE
T ss_pred HHcCCcHHHHcCC---CeEECCCCCHH-HHHHHHHHCCCcEEEEEcCC-CEEEEEEE
Confidence 3567899999998 78899999997 99999999999999999754 78999986
No 62
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=97.54 E-value=0.00014 Score=49.05 Aligned_cols=38 Identities=11% Similarity=0.277 Sum_probs=35.1
Q ss_pred EEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 216 TFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 216 v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
+++++.++++. ++++.+.+++++++||+++ ++++|+++
T Consensus 2 ~~~v~~~~~~~-~a~~~m~~~~~~~~pV~d~--~~l~Givt 39 (70)
T 3fio_A 2 AIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVT 39 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEE
T ss_pred CeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEE
Confidence 57899999997 9999999999999999986 89999986
No 63
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.53 E-value=8.2e-05 Score=56.99 Aligned_cols=54 Identities=17% Similarity=0.216 Sum_probs=45.8
Q ss_pred cccccccccccccc----eEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIA----ETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~----~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
..+.+++++|.++. ++.+++.++++. ++++.+.+++++++||.+++ ++++|++.
T Consensus 74 ~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~~-g~~~Giit 131 (144)
T 2nyc_A 74 DLSLSVGEALMRRSDDFEGVYTCTKNDKLS-TIMDNIRKARVHRFFVVDDV-GRLVGVLT 131 (144)
T ss_dssp -CCSBHHHHHHHCC------CEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEE
T ss_pred cCCccHHHHHhcCccccCCCeEECCCCcHH-HHHHHHHHCCCCEEEEECCC-CCEEEEEE
Confidence 45789999999864 789999999997 99999999999999999854 78999986
No 64
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=97.53 E-value=7.1e-05 Score=57.80 Aligned_cols=53 Identities=25% Similarity=0.502 Sum_probs=44.9
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 200 ~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
...+.+++++|.| +..+++.++++. ++++.+.+++++++||++++ ++++|++.
T Consensus 81 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~~~l~Vvd~~-g~~~Giit 133 (152)
T 4gqw_A 81 KTNGKLVGDLMTP--APLVVEEKTNLE-DAAKILLETKYRRLPVVDSD-GKLVGIIT 133 (152)
T ss_dssp ---CCBHHHHSEE--SCCCEESSSBHH-HHHHHHHHSSCCEEEEECTT-SBEEEEEE
T ss_pred HhccccHHHhcCC--CceEECCCCcHH-HHHHHHHHCCCCEEEEECCC-CcEEEEEE
Confidence 3457899999997 567899999997 99999999999999999753 78999986
No 65
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=97.52 E-value=8.1e-05 Score=55.69 Aligned_cols=47 Identities=21% Similarity=0.338 Sum_probs=42.8
Q ss_pred cccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 205 TASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 205 ~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
+|+|+|+| ++.+++.++++. ++++.+.+++++++||.+ .++++|++.
T Consensus 2 ~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd--~~~~~G~it 48 (125)
T 1pbj_A 2 RVEDVMVT--DVDTIDITASLE-DVLRNYVENAKGSSVVVK--EGVRVGIVT 48 (125)
T ss_dssp CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCCCEEEEEE--TTEEEEEEE
T ss_pred CHHHhcCC--CceEECCCCcHH-HHHHHHHHcCCCEEEEEe--CCeeEEEEe
Confidence 68999987 788999999997 999999999999999998 378999986
No 66
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.50 E-value=2.1e-05 Score=74.17 Aligned_cols=79 Identities=19% Similarity=0.309 Sum_probs=25.0
Q ss_pred cccHHHHHHHHHhhcccccCCCCCC-----HhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCC
Q 025093 164 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 238 (258)
Q Consensus 164 ~~s~eEl~~lv~~~~~e~~~~g~l~-----~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~ 238 (258)
.+|++++...+...+ .-|.+. +++.+++.++ ++++++|+ .+.++++.++++. ++++.+.+++|
T Consensus 52 tVTe~~lA~ala~~G----GiGvI~~~~~~e~~a~~v~~v-----k~~~~~m~--~~~v~v~~~~tv~-ea~~~m~~~~~ 119 (490)
T 4avf_A 52 TVTEARLAIAMAQEG----GIGIIHKNMGIEQQAAEVRKV-----KKHETAIV--RDPVTVTPSTKII-ELLQMAREYGF 119 (490)
T ss_dssp TTCSHHHHHHHHHHT----SEEEECCSSCHHHHHHHHHHH-----HHCCC------------------------------
T ss_pred hhCHHHHHHHHHHcC----CCccccCCCCHHHHHHHhhhh-----cccccCcc--cCceEeCCCCcHH-HHHHHHHHhCC
Confidence 578999998886422 224454 6778888888 46788998 4788999999997 99999999999
Q ss_pred ceeeeeeCCCCcEEEEEE
Q 025093 239 SRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 239 SR~PVy~~~~D~IvGiv~ 256 (258)
|++||++ .++++|+|+
T Consensus 120 s~~pVvd--~g~lvGIVt 135 (490)
T 4avf_A 120 SGFPVVE--QGELVGIVT 135 (490)
T ss_dssp ------------------
T ss_pred CEEEEEE--CCEEEEEEE
Confidence 9999998 488999986
No 67
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.50 E-value=6.5e-05 Score=71.26 Aligned_cols=53 Identities=15% Similarity=0.224 Sum_probs=47.5
Q ss_pred cccccccccccccceEEEEeCC-CCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDIN-AKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~-~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
|.+.+|+|+|++ ++++++.+ +++. ++++.+.+++++++||++++.++++|+|+
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~~~lpVvd~~~g~lvGiVt 434 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRVDQLPVVDQDDGSVLGVVG 434 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTCSEEEEECTTTCCEEEEEE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCCCeEEEEECCCCEEEEEEE
Confidence 567999999984 78889999 9997 99999999999999999855689999996
No 68
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.47 E-value=0.00021 Score=55.67 Aligned_cols=53 Identities=15% Similarity=0.267 Sum_probs=47.0
Q ss_pred cccccccccccc----ceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPI----AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR----~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+++++|.|+ .+..+++.++++. ++++.+.+++.+++||.+++ ++++|++.
T Consensus 85 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit 141 (152)
T 2uv4_A 85 LDVSVTKALQHRSHYFEGVLKCYLHETLE-TIINRLVEAEVHRLVVVDEN-DVVKGIVS 141 (152)
T ss_dssp TTSBGGGGGGTCCHHHHTCSEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEE
T ss_pred hcchHHHHHhhhhcccCCCeEECCCCcHH-HHHHHHHHcCCeEEEEECCC-CeEEEEEE
Confidence 467899999876 6788999999997 99999999999999999863 68999986
No 69
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=97.46 E-value=0.00012 Score=56.27 Aligned_cols=51 Identities=14% Similarity=0.155 Sum_probs=44.9
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
..+.+++++|.| ..+++.++++. ++++.+.+++..++||.+++ ++++|++.
T Consensus 67 ~~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit 117 (136)
T 3lfr_A 67 GDSDDVKKLLRP---ATFVPESKRLN-VLLREFRANHNHMAIVIDEY-GGVAGLVT 117 (136)
T ss_dssp GGGCCGGGTCBC---CCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEE
T ss_pred CCCcCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEE
Confidence 457789999976 78899999997 99999999999999999753 78999986
No 70
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=97.46 E-value=0.00014 Score=57.38 Aligned_cols=51 Identities=18% Similarity=0.222 Sum_probs=45.9
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
..+.+++++|.| ++.+++.++++. ++++.+.+++.+++||.++ ++++|++.
T Consensus 75 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~lvGiit 125 (160)
T 2o16_A 75 AFETPLFEVMHT--DVTSVAPQAGLK-ESAIYMQKHKIGCLPVVAK--DVLVGIIT 125 (160)
T ss_dssp -CCCBHHHHSCS--CEEEBCTTSBHH-HHHHHHHHTTCSCEEEEET--TEEEEEEC
T ss_pred hcccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCCEEEEEEC--CEEEEEEE
Confidence 357899999996 789999999997 9999999999999999987 89999985
No 71
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=97.44 E-value=0.00015 Score=54.98 Aligned_cols=51 Identities=22% Similarity=0.321 Sum_probs=45.2
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+++++|.| +..+++.++++. ++++.+.+++++++||.+++ ++++|++.
T Consensus 65 ~~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Giit 115 (133)
T 2ef7_A 65 LETKAEEFMTA--SLITIREDSPIT-GALALMRQFNIRHLPVVDDK-GNLKGIIS 115 (133)
T ss_dssp TTCBGGGTSEE--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEE
T ss_pred cccCHHHHcCC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEE
Confidence 35789999986 678899999997 99999999999999999754 78999986
No 72
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=97.37 E-value=0.0001 Score=58.79 Aligned_cols=51 Identities=20% Similarity=0.280 Sum_probs=45.8
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
..+.+|+++|++ ++.+++.++++. ++++.+.+++..++||.++ ++++|+|.
T Consensus 102 ~~~~~v~~im~~--~~~tv~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~lvGivt 152 (170)
T 4esy_A 102 GRKLTASAVMTQ--PVVTAAPEDSVG-SIADQMRRHGIHRIPVVQD--GVPVGIVT 152 (170)
T ss_dssp HTTCBHHHHCBC--CSCCBCTTSBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEE
T ss_pred ccccchhhhccc--CcccCCcchhHH-HHHHHHHHcCCcEEEEEEC--CEEEEEEE
Confidence 457799999986 778899999997 9999999999999999985 78999986
No 73
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=97.35 E-value=0.00017 Score=56.02 Aligned_cols=52 Identities=17% Similarity=0.259 Sum_probs=46.1
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 200 ~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
+..+.+++++|.+. ..+++.++++. ++++.+.+++++++||.+++ +++|++.
T Consensus 91 ~~~~~~v~~~m~~~--~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~--~~~Giit 142 (149)
T 3k2v_A 91 DMRDASIADVMTRG--GIRIRPGTLAV-DALNLMQSRHITCVLVADGD--HLLGVVH 142 (149)
T ss_dssp CCTTCBHHHHSEES--CCEECTTCBHH-HHHHHHHHHTCSEEEEEETT--EEEEEEE
T ss_pred CcccCcHHHHcCCC--CeEECCCCCHH-HHHHHHHHcCCCEEEEecCC--EEEEEEE
Confidence 34678999999864 57899999997 99999999999999999875 9999986
No 74
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=97.31 E-value=0.00062 Score=54.39 Aligned_cols=60 Identities=15% Similarity=0.116 Sum_probs=48.2
Q ss_pred HHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 192 TTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 192 ~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
++++....+-.+.+++++| .+..+++.++++. ++++.+.+++..++||.+++ ++++|++.
T Consensus 95 ~dl~~~~~~~~~~~v~~im---~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit 154 (172)
T 3lhh_A 95 KQLLSESIAGERLELVDLV---KNCNFVPNSLSGM-ELLEHFRTTGSQMVFVVDEY-GDLKGLVT 154 (172)
T ss_dssp HHHHHHHHTTCCCCGGGGC---BCCEEEETTCCHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEE
T ss_pred HHHHHHHhhcCcccHHHHh---cCCeEeCCCCCHH-HHHHHHHHcCCeEEEEEeCC-CCEEEEee
Confidence 3444444433478999999 4678899999997 99999999999999999753 68999986
No 75
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=97.29 E-value=0.00053 Score=53.03 Aligned_cols=60 Identities=12% Similarity=0.128 Sum_probs=48.1
Q ss_pred HHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 192 TTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 192 ~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
++++....+-.+.+++++|. +..+++.++++. ++++.+.+++..++||.+++ ++++|++.
T Consensus 76 ~dl~~~~~~~~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~~-g~~~Giit 135 (148)
T 3lv9_A 76 RDLYNQKINENKIELEEILR---DIIYISENLTID-KALERIRKEKLQLAIVVDEY-GGTSGVVT 135 (148)
T ss_dssp HHHHHHHHHHSCCCGGGTCB---CCEEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SSEEEEEE
T ss_pred HHHHHHHhcCCCccHHHhcC---CCeEECCCCCHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEE
Confidence 44444433333789999992 468899999997 99999999999999999753 68999986
No 76
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=97.29 E-value=0.00043 Score=52.41 Aligned_cols=50 Identities=18% Similarity=0.248 Sum_probs=43.9
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+++++|.| ..+++.++++. ++++.+.+++..++||.+++ ++++|++.
T Consensus 70 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~~vGivt 119 (130)
T 3i8n_A 70 GQKQLGAVMRP---IQVVLNNTALP-KVFDQMMTHRLQLALVVDEY-GTVLGLVT 119 (130)
T ss_dssp TTSBHHHHSEE---CCEEETTSCHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEE
T ss_pred CcCCHHHHhcC---CcCcCCCCcHH-HHHHHHHHcCCeEEEEEcCC-CCEEEEEE
Confidence 46789999964 67899999997 99999999999999999753 78999986
No 77
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=97.27 E-value=0.00043 Score=52.44 Aligned_cols=50 Identities=18% Similarity=0.159 Sum_probs=43.8
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+++++|.| ..+++.++++. ++++.+.+++..++||.++ .++++|++.
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~pVvd~-~g~~~Giit 116 (129)
T 3jtf_A 67 PALDIRSLVRP---AVFIPEVKRLN-VLLREFRASRNHLAIVIDE-HGGISGLVT 116 (129)
T ss_dssp TTSCGGGGCBC---CCEEETTCBHH-HHHHHHHTSSCCEEEEECC--CCEEEEEE
T ss_pred CCcCHHHHhCC---CeEeCCCCcHH-HHHHHHHhcCCeEEEEEeC-CCCEEEEEE
Confidence 56789999976 67899999997 9999999999999999975 368999986
No 78
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=97.27 E-value=0.00032 Score=52.93 Aligned_cols=50 Identities=10% Similarity=0.142 Sum_probs=43.7
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+++++|.| ..+++.++++. ++++.+.+++..++||.++ .++++|++.
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~g~~~Giit 116 (127)
T 3nqr_A 67 EAFSMDKVLRT---AVVVPESKRVD-RMLKEFRSQRYHMAIVIDE-FGGVSGLVT 116 (127)
T ss_dssp CCCCHHHHCBC---CCEEETTCBHH-HHHHHHHHTTCCEEEEECT-TSCEEEEEE
T ss_pred CCCCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeC-CCCEEEEEE
Confidence 56789999966 46899999997 9999999999999999975 368999986
No 79
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=97.26 E-value=0.00063 Score=52.09 Aligned_cols=50 Identities=10% Similarity=0.148 Sum_probs=44.3
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+++++|.+ +..+++.+ ++. ++++.+.+++.+++||.+++ ++++|++.
T Consensus 69 ~~~~v~~~m~~--~~~~v~~~-~l~-~a~~~m~~~~~~~l~Vvd~~-g~~~Giit 118 (141)
T 2rih_A 69 LDGPAMPIANS--PITVLDTD-PVH-VAAEKMRRHNIRHVVVVNKN-GELVGVLS 118 (141)
T ss_dssp TTSBSGGGCBC--CCEEETTS-BHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEE
T ss_pred CCCCHHHHcCC--CCeEEcCC-CHH-HHHHHHHHcCCeEEEEEcCC-CcEEEEEE
Confidence 36899999986 67889999 997 99999999999999999853 78999986
No 80
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=97.20 E-value=0.00066 Score=52.93 Aligned_cols=60 Identities=18% Similarity=0.132 Sum_probs=48.2
Q ss_pred HHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 192 TTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 192 ~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
++++....+-.+.+++++| + +..+++.++++. ++++.+.+++..++||.+++ ++++|++.
T Consensus 74 ~dl~~~~~~~~~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~~-g~~vGivt 133 (153)
T 3oco_A 74 YDIVRQARIDDKAKISTIM-R--DIVSVPENMKVP-DVMEEMSAHRVPMAIVIDEY-GGTSGIIT 133 (153)
T ss_dssp HHHHHHHHHHTTSBGGGTC-B--CCEEEETTSBHH-HHHHHHHHTTCSCEEEECTT-SCEEEEEC
T ss_pred HHHHhHHhcCCCCcHHHHh-C--CCeEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CCEEEEee
Confidence 4444443333478999999 2 678899999997 99999999999999999753 78999985
No 81
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=97.19 E-value=0.00026 Score=53.87 Aligned_cols=52 Identities=25% Similarity=0.383 Sum_probs=44.8
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcC-----CceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKG-----HSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~-----~SR~PVy~~~~D~IvGiv~ 256 (258)
..+.+++++|.| +..+++.++++. ++++.+.+++ ++++||.+++ ++++|++.
T Consensus 70 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~~~~~~l~Vvd~~-g~~~Giit 126 (138)
T 2p9m_A 70 TLETTIGDVMTK--DVITIHEDASIL-EAIKKMDISGKKEEIINQLPVVDKN-NKLVGIIS 126 (138)
T ss_dssp CSSCBHHHHSCS--SCCCEETTSBHH-HHHHHHTCC-----CCCEEEEECTT-SBEEEEEE
T ss_pred cCCcCHHHHhCC--CcEEECCCCCHH-HHHHHHHhcCCccccccEEEEECCC-CeEEEEEE
Confidence 457899999996 678899999997 9999999999 9999999854 78999986
No 82
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=97.18 E-value=0.00038 Score=54.66 Aligned_cols=50 Identities=16% Similarity=0.159 Sum_probs=44.6
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+++++|.| ..+++.++++. ++++.+.+++..++||.+++ ++++|++.
T Consensus 101 ~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-g~~~Givt 150 (156)
T 3oi8_A 101 EQFHLKSILRP---AVFVPEGKSLT-ALLKEFREQRNHMAIVIDEY-GGTSGLVT 150 (156)
T ss_dssp GGCCHHHHCBC---CCEEETTSBHH-HHHHHHHHTTCCEEEEECTT-SSEEEEEE
T ss_pred CcccHHHHcCC---CEEECCCCCHH-HHHHHHHhcCCeEEEEECCC-CCEEEEEE
Confidence 57789999976 68899999997 99999999999999999764 78999986
No 83
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.11 E-value=0.00031 Score=54.70 Aligned_cols=49 Identities=12% Similarity=0.179 Sum_probs=43.6
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
++.+|+++ .++.+++.++++. ++++.+.+++++.+||++++ ++++|++.
T Consensus 21 ~~~~v~~~----~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~vGivt 69 (152)
T 2uv4_A 21 EELQIGTY----ANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYS 69 (152)
T ss_dssp HHHTCSBC----SSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEE
T ss_pred HHccCCcc----CCceEeCCCCcHH-HHHHHHHHcCCceEeEECCC-CcEEEEEe
Confidence 66788888 6788999999997 99999999999999999864 78999986
No 84
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.11 E-value=0.00066 Score=51.57 Aligned_cols=50 Identities=18% Similarity=0.127 Sum_probs=43.0
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
++.+++++|. +..+++.++++. ++++.+.+++..++||.+++ ++++|++.
T Consensus 68 ~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit 117 (130)
T 3hf7_A 68 TKEIMLRAAD---EIYFVPEGTPLS-TQLVKFQRNKKKVGLVVDEY-GDIQGLVT 117 (130)
T ss_dssp CHHHHHHHSB---CCCEEETTCBHH-HHHHHHHHHCCCEEEEECTT-SCEEEEEE
T ss_pred chhhHHHhcc---CCeEeCCCCcHH-HHHHHHHhcCCeEEEEEcCC-CCEEEEee
Confidence 4568999994 467899999997 99999999999999999753 78999986
No 85
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=97.07 E-value=0.00039 Score=55.28 Aligned_cols=53 Identities=26% Similarity=0.486 Sum_probs=46.2
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 200 ~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
...+.+++++|+| +..+++.++++. ++++.+.+++++++||.+++ ++++|++.
T Consensus 94 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit 146 (180)
T 3sl7_A 94 KTYGKVVGDLMTP--SPLVVRDSTNLE-DAARLLLETKFRRLPVVDAD-GKLIGILT 146 (180)
T ss_dssp TTTTCBHHHHSEE--SCCCEETTSBHH-HHHHHHTTSTTCEEEEECTT-CBEEEEEE
T ss_pred ccccccHHHHhCC--CceEeCCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEE
Confidence 4567899999996 457899999997 99999999999999999753 78999986
No 86
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=97.07 E-value=0.00071 Score=59.17 Aligned_cols=54 Identities=17% Similarity=0.216 Sum_probs=48.4
Q ss_pred cccccccccccccc----eEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIA----ETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~----~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
..+.+|+++|+++. ++.+++.++++. ++++.+.+++..++||.+++ ++++|+|.
T Consensus 253 ~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~~-~~l~Giit 310 (323)
T 3t4n_C 253 DLSLSVGEALMRRSDDFEGVYTCTKNDKLS-TIMDNIRKARVHRFFVVDDV-GRLVGVLT 310 (323)
T ss_dssp HTTSBHHHHGGGSCTTCCCCEEECTTCBHH-HHHHHHHHSCCCEEEEECTT-SBEEEEEE
T ss_pred hccCCHHHHHhhccccCCCCEEECCCCCHH-HHHHHHHHhCCCEEEEECCC-CcEEEEEE
Confidence 44679999999987 899999999997 99999999999999999754 78999986
No 87
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.06 E-value=0.00092 Score=51.98 Aligned_cols=50 Identities=16% Similarity=0.249 Sum_probs=44.0
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
..+.+++++|.| ++.+++.++++. ++++.+.++++ +||.+++ ++++|++.
T Consensus 80 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~--l~Vvd~~-g~~~Giit 129 (157)
T 2emq_A 80 LETMKVEEVMNR--NIPRLRLDDSLM-KAVGLIVNHPF--VCVENDD-GYFAGIFT 129 (157)
T ss_dssp GGTCBGGGTCBC--CCCEEETTSBHH-HHHHHHHHSSE--EEEECSS-SSEEEEEE
T ss_pred hcCCcHHHHhCC--CCceecCCCcHH-HHHHHHhhCCE--EEEEcCC-CeEEEEEE
Confidence 467899999997 678899999997 99999999988 9999754 78999986
No 88
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.03 E-value=0.0011 Score=52.94 Aligned_cols=51 Identities=10% Similarity=0.188 Sum_probs=45.5
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
..+.+++++|.+ +..+++.++++. ++++.+.+++++++||.+ .++++|++.
T Consensus 105 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~l~Vvd--~g~~vGiit 155 (185)
T 2j9l_A 105 PPTLKLRNILDL--SPFTVTDLTPME-IVVDIFRKLGLRQCLVTH--NGRLLGIIT 155 (185)
T ss_dssp CCCEECGGGEES--SCCEEETTSBHH-HHHHHHHHHTCSEEEEEE--TTEEEEEEE
T ss_pred ccCccHHHhhCc--CCeEeCCCCCHH-HHHHHHHhCCCcEEEEEE--CCEEEEEEE
Confidence 467899999986 578899999997 999999999999999998 378999986
No 89
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=97.02 E-value=0.0012 Score=45.36 Aligned_cols=39 Identities=10% Similarity=0.280 Sum_probs=35.3
Q ss_pred eEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 215 ETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 215 ~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
++++++.++++. |+.+.+.+++++.+||.++ ++++||+.
T Consensus 1 k~vtv~p~~tv~-ea~~~M~~~~i~~~~V~d~--~~lvGIvT 39 (70)
T 3ghd_A 1 KAIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVT 39 (70)
T ss_dssp CEEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEE
T ss_pred CCEEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEE
Confidence 467899999997 9999999999999999975 78999984
No 90
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=97.01 E-value=0.00055 Score=58.45 Aligned_cols=53 Identities=21% Similarity=0.325 Sum_probs=45.7
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 200 ~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
...+.+++++|++ ++.+++.++++. ++.+.+.+++++++||.++ .++++|++.
T Consensus 217 ~~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~-~~~lvGiit 269 (282)
T 2yzq_A 217 QLPNKPVAEIMTR--DVIVATPHMTVH-EVALKMAKYSIEQLPVIRG-EGDLIGLIR 269 (282)
T ss_dssp --CCCBGGGTCBS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEEET-TTEEEEEEE
T ss_pred hhccCCHHHhcCC--CCceeCCCCCHH-HHHHHHHHcCcceeEEECC-CCCEEEEEe
Confidence 3457899999996 778999999997 9999999999999999985 358999986
No 91
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.00 E-value=0.00058 Score=53.49 Aligned_cols=50 Identities=20% Similarity=0.313 Sum_probs=43.9
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
..+.+++++|.| ++.+++.++++. ++++.+.++++ +||.+++ ++++|++.
T Consensus 83 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~--lpVvd~~-g~~vGiit 132 (159)
T 1yav_A 83 LDQITVEEVMLT--DIPRLHINDPIM-KGFGMVINNGF--VCVENDE-QVFEGIFT 132 (159)
T ss_dssp TTTSBHHHHSBC--SCCEEETTSBHH-HHHHHTTTCSE--EEEECTT-CBEEEEEE
T ss_pred hccCCHHHhcCC--CCceEcCCCCHH-HHHHHHHhCCE--EEEEeCC-CeEEEEEE
Confidence 567899999998 678899999997 99999999887 9999864 78999986
No 92
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=97.00 E-value=0.00078 Score=50.73 Aligned_cols=49 Identities=12% Similarity=0.111 Sum_probs=43.3
Q ss_pred ccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 204 ~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+++++|.+ +..+++.++++. ++++.+.+++..++||.+++ ++++|++.
T Consensus 68 ~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~lpVvd~~-g~~~Giit 116 (128)
T 3gby_A 68 EKLGEELLE--TVRSYRPGEQLF-DNLISVAAAKCSVVPLADED-GRYEGVVS 116 (128)
T ss_dssp CBCCGGGCB--CCCCBCTTSBGG-GSHHHHHHCSSSEEEEECTT-CBEEEEEE
T ss_pred CcHHHHccC--CCcEECCCCCHH-HHHHHHHhCCCcEEEEECCC-CCEEEEEE
Confidence 679999985 667899999997 99999999999999999753 78999986
No 93
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=96.99 E-value=0.00048 Score=59.52 Aligned_cols=52 Identities=21% Similarity=0.224 Sum_probs=47.3
Q ss_pred hccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 199 LELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 199 ~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+....+|+|+|++ ++.+++.++++. ++++.+.+++++++||++ ++++|++.
T Consensus 15 ~~~~~~~V~dim~~--~~~~v~~~~~v~-~a~~~m~~~~~~~~~V~d---~~l~GivT 66 (296)
T 3ddj_A 15 LYFQGMNIETLMIK--NPPILSKEDRLG-SAFKKINEGGIGRIIVAN---EKIEGLLT 66 (296)
T ss_dssp CTTCCSSGGGTCEE--SCCEECTTSBHH-HHHHHTTGGGCCEEEEES---SSEEEEEE
T ss_pred hhhcccCHHHhccC--CCcEECCCccHH-HHHHHHHHCCCceEEEEC---CeEEEEEe
Confidence 35678899999997 789999999997 999999999999999997 89999985
No 94
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=96.99 E-value=0.0013 Score=50.86 Aligned_cols=50 Identities=10% Similarity=0.265 Sum_probs=43.3
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
..+.+++++|.+ +..+++.++++. ++++.+.++++ +||.+++ ++++|++.
T Consensus 84 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~--l~Vvd~~-g~~~Giit 133 (150)
T 3lqn_A 84 LEEMKVEQVMKQ--DIPVLKLEDSFA-KALEMTIDHPF--ICAVNED-GYFEGILT 133 (150)
T ss_dssp GGGCBGGGTCBS--SCCEEETTCBHH-HHHHHHHHCSE--EEEECTT-CBEEEEEE
T ss_pred HhcCCHHHHhcC--CCceeCCCCCHH-HHHHHHHhCCE--EEEECCC-CcEEEEEE
Confidence 467899999995 678899999997 99999999987 9999753 78999986
No 95
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=96.96 E-value=0.0014 Score=49.77 Aligned_cols=51 Identities=20% Similarity=0.323 Sum_probs=44.9
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
..+.+++++|.| +..+++.++++. ++++.+.+++++++ |.+++ ++++|++.
T Consensus 69 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~l-Vvd~~-g~~~Giit 119 (138)
T 2yzi_A 69 PYDIPVERIMTR--NLITANVNTPLG-EVLRKMAEHRIKHI-LIEEE-GKIVGIFT 119 (138)
T ss_dssp CTTSBGGGTCBC--SCCEEETTSBHH-HHHHHHHHHTCSEE-EEEET-TEEEEEEE
T ss_pred cccCCHHHHhhC--CCeEECCCCcHH-HHHHHHHhcCCCEE-EECCC-CCEEEEEE
Confidence 457899999986 678899999997 99999999999999 99854 78999986
No 96
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=96.77 E-value=0.0015 Score=54.06 Aligned_cols=52 Identities=15% Similarity=0.220 Sum_probs=45.6
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
-.+.+++++|++ ++.+++.++++. ++++.+.+++..++||.+++ +.++|+|.
T Consensus 113 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVD~~-g~lvGiIT 164 (205)
T 3kxr_A 113 EPHEPLISLLSE--DSRALTANTTLL-DAAEAIEHSREIELPVIDDA-GELIGRVT 164 (205)
T ss_dssp CTTSBGGGGCCS--SCCCEETTSCHH-HHHHHHHTSSCSEEEEECTT-SBEEEEEE
T ss_pred CCcchHHHHhcC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEcCC-CeEEEEEE
Confidence 357889999985 578899999997 99999999999999999753 68999986
No 97
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=96.73 E-value=0.0015 Score=55.76 Aligned_cols=51 Identities=20% Similarity=0.246 Sum_probs=40.7
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+++++|.| +..+++.++++. ++++.+.+++++++||++++ ++++|++.
T Consensus 58 ~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit 108 (282)
T 2yzq_A 58 DEEQLAMLVKR--DVPVVKENDTLK-KAAKLMLEYDYRRVVVVDSK-GKPVGILT 108 (282)
T ss_dssp ------CCCBS--CCCEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEE
T ss_pred ccCCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEE
Confidence 46789999997 478899999997 99999999999999999875 78999985
No 98
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=96.64 E-value=0.0012 Score=51.47 Aligned_cols=50 Identities=10% Similarity=0.214 Sum_probs=42.6
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEEe
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~~ 257 (258)
.+.+++++|.+ ++.+++.++++. ++++.+.+++ ++||.++ .++++|++..
T Consensus 84 ~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~--~lpVvd~-~g~~~Giit~ 133 (156)
T 3ctu_A 84 ADTDIVHMTKT--DVAVVSPDFTIT-EVLHKLVDES--FLPVVDA-EGIFQGIITR 133 (156)
T ss_dssp TTSBGGGGCBC--SCCCBCSSCCHH-HHHHHTTTSS--EEEEECT-TSBEEEEEET
T ss_pred ccCcHHHhccC--CceeeCCCCcHH-HHHHHHHHcC--eEEEEcC-CCeEEEEEEH
Confidence 47899999985 678899999997 9999998886 7999974 3789999863
No 99
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=96.53 E-value=0.0023 Score=49.89 Aligned_cols=52 Identities=13% Similarity=0.098 Sum_probs=44.6
Q ss_pred ccccccccccccc----eEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIA----ETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~----~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+++++|.+.. ...+++.++++. ++++.+.+++.+++||.++ ++++|++.
T Consensus 82 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~--g~l~Giit 137 (164)
T 2pfi_A 82 HQQCLQDILARGCPTEPVTLTLFSETTLH-QAQNLFKLLNLQSLFVTSR--GRAVGCVS 137 (164)
T ss_dssp CCCBHHHHHHTTCCCBCCCCCEETTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEE
T ss_pred ccchhhhhhcccccccCCceEECCCCcHH-HHHHHHHHhCCCEEEEEEC--CEEEEEEE
Confidence 4678999998642 267899999997 9999999999999999983 78999986
No 100
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=96.50 E-value=0.00042 Score=65.39 Aligned_cols=54 Identities=26% Similarity=0.415 Sum_probs=0.0
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEEe
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~~ 257 (258)
.+.+|+++|+|+++..+++.+++++ ++++.+.+++.+++||.+++ ++++|+|..
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~ 212 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLS-EANKIIWEKKLNALPIIDDD-QHLRYIVFR 212 (503)
T ss_dssp --------------------------------------------------------
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEe
Confidence 5678999999998999999999997 99999999999999999865 789999863
No 101
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=96.47 E-value=0.0036 Score=51.83 Aligned_cols=49 Identities=12% Similarity=0.101 Sum_probs=42.3
Q ss_pred ccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 204 ~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
-++.++|+ .++.+++.++++. ++++.+.+++++++||.+++ +.++|++.
T Consensus 13 ~~~~~~~~--~~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~l~Givt 61 (213)
T 1vr9_A 13 MKVKKWVT--QDFPMVEESATVR-ECLHRMRQYQTNECIVKDRE-GHFRGVVN 61 (213)
T ss_dssp CBGGGGCB--SCSCEEETTCBHH-HHHHHHHHTTSSEEEEECTT-SBEEEEEE
T ss_pred cCHHHhhc--CCCeEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CEEEEEEE
Confidence 36677776 4788899999997 99999999999999999754 78999986
No 102
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=96.44 E-value=0.0028 Score=54.70 Aligned_cols=53 Identities=19% Similarity=0.402 Sum_probs=46.4
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEEe
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~~ 257 (258)
-.+.+++++|.+ ++.+++.++++. ++++.+.+++.+++||.+++ +.++|+|..
T Consensus 196 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGivT~ 248 (278)
T 2yvy_A 196 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTV 248 (278)
T ss_dssp CTTCBSTTTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEH
T ss_pred CCCCcHHHHhCC--CCeEEeCCCCHH-HHHHHHHhcCCCEEEEEeCC-CeEEEEEEH
Confidence 367899999975 578899999997 99999999999999999754 789999863
No 103
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=96.36 E-value=0.0033 Score=55.08 Aligned_cols=53 Identities=15% Similarity=0.215 Sum_probs=46.6
Q ss_pred cccccccccccc----ceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPI----AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR----~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+++++|.++ .++.+++.++++. ++++.+.+++..++||.+++ ++++|+|.
T Consensus 249 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~~-g~l~Giit 305 (334)
T 2qrd_G 249 LDLSVGEALLKRPANFDGVHTCRATDRLD-GIFDAIKHSRVHRLFVVDEN-LKLEGILS 305 (334)
T ss_dssp GGSBHHHHHTTCCTTCCCCCEECTTCBHH-HHHHHHHHSCCCEEEEECTT-CBEEEEEE
T ss_pred ccCcHHHHHhcccccCCCCEEECCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEe
Confidence 467899999975 5788999999997 99999999999999999753 68999986
No 104
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=96.26 E-value=0.0033 Score=59.44 Aligned_cols=54 Identities=19% Similarity=0.246 Sum_probs=48.2
Q ss_pred ccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 200 ~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.-.+.+++++|+| .+.++++.+++++ ++++.+.+++..++||.+++ ++++|++.
T Consensus 171 ~~~~~~V~~vM~~-~~~vtv~~~~~l~-eal~~m~~~~i~~lpVVDe~-g~l~GiIT 224 (511)
T 3usb_A 171 QDYSIKISDVMTK-EQLITAPVGTTLS-EAEKILQKYKIEKLPLVDNN-GVLQGLIT 224 (511)
T ss_dssp CCSSSBHHHHCCC-CCCCCEETTCCHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEE
T ss_pred ccCCCcHHHhccc-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEeCC-CCEeeecc
Confidence 3457889999998 7889999999997 99999999999999999764 78999986
No 105
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=96.22 E-value=0.0038 Score=54.31 Aligned_cols=53 Identities=13% Similarity=0.312 Sum_probs=46.1
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEEe
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~~ 257 (258)
..+.+++++|.+ ++.+++.++++. ++.+.+.+++.+++||.+++ +.++|+|..
T Consensus 198 ~~~~~v~~im~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIT~ 250 (286)
T 2oux_A 198 DDDTLIADILNE--RVISVHVGDDQE-DVAQTIRDYDFLAVPVTDYD-DHLLGIVTV 250 (286)
T ss_dssp CTTSBHHHHSBS--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEH
T ss_pred CCCCcHHHHcCC--CCeeecCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEH
Confidence 357889999986 578899999997 99999999999999999753 789999863
No 106
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=96.16 E-value=0.0024 Score=54.14 Aligned_cols=51 Identities=20% Similarity=0.327 Sum_probs=44.9
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+++++|++ +..+++.++++. ++++.+.+++++++||.++ .++++|++.
T Consensus 221 ~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~l~Vvd~-~g~~~Givt 271 (280)
T 3kh5_A 221 TNVRMEEIMKR--DVITAKEGDKLK-KIAEIMVTNDIGALPVVDE-NLRIKGIIT 271 (280)
T ss_dssp HHCBHHHHSBS--SCCCBCTTCBHH-HHHHHHHHHTCCEEEEECT-TCBEEEEEE
T ss_pred hCCcHHHHhcC--CCEEECCCCCHH-HHHHHHHHCCCCEEEEECC-CCeEEEEEe
Confidence 56889999974 678899999997 9999999999999999975 368999986
No 107
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=96.10 E-value=0.0042 Score=49.88 Aligned_cols=41 Identities=10% Similarity=0.095 Sum_probs=37.3
Q ss_pred ccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCC
Q 025093 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE 247 (258)
Q Consensus 204 ~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~ 247 (258)
.+|+++|++ ++++++.++++. ++++.+.+++++++||++++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~~~~pVvd~~ 49 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHLYGLVVKDDN 49 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTCCEEEEECTT
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC
Confidence 789999984 788999999997 99999999999999999753
No 108
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.06 E-value=0.001 Score=62.63 Aligned_cols=54 Identities=20% Similarity=0.254 Sum_probs=0.0
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEEe
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~~ 257 (258)
.+.+++|+|+|+.+.++++.+++++ ++++.+.+++..++||.+++ ++++|++..
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~ 198 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLE-EMKAKLYENRIEKMLVVDEN-FYLRGLVTF 198 (490)
T ss_dssp --------------------------------------------------------
T ss_pred cCCcHHHHhccCCCCEEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeh
Confidence 4678999999988899999999997 99999999999999999754 789998753
No 109
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=96.05 E-value=0.0031 Score=49.73 Aligned_cols=50 Identities=12% Similarity=0.294 Sum_probs=41.9
Q ss_pred cccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 201 ~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
+.+.+|+++|++ ++.+++.++++. ++++.+.++++ +||.+++ ++++|+|.
T Consensus 83 ~~~~~v~~im~~--~~~~v~~~~~l~-~~~~~m~~~~~--lpVVd~~-g~l~GiiT 132 (156)
T 3k6e_A 83 MADTDIVHMTKT--DVAVVSPDFTIT-EVLHKLVDESF--LPVVDAE-GIFQGIIT 132 (156)
T ss_dssp HTTSBGGGTCBC--SCCCBCTTCCHH-HHHHHTTTSSE--EEEECTT-SBEEEEEE
T ss_pred ccccCHHHhhcC--CceecccccHHH-HHHHHHHHcCC--eEEEecC-CEEEEEEE
Confidence 457899999985 678899999997 99999987765 9999753 78999986
No 110
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=95.94 E-value=0.0014 Score=61.80 Aligned_cols=53 Identities=19% Similarity=0.234 Sum_probs=41.5
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+++|+|+|+.+.++++.+++++ ++++.+.+++..++||.+++ ++++|++.
T Consensus 147 ~~~~v~diM~p~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-G~l~GiIT 199 (496)
T 4fxs_A 147 LTKSVAAVMTPKERLATVKEGATGA-EVQEKMHKARVEKILVVNDE-FQLKGMIT 199 (496)
T ss_dssp TTSBGGGTSEEGGGCCEEECC-----CGGGTCC---CCCEEEECTT-SBCCEEEC
T ss_pred CCCcHHHHhcCCCCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CCEEEeeh
Confidence 5678999999998899999999997 99999999999999999764 78999985
No 111
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=95.94 E-value=0.0021 Score=60.32 Aligned_cols=58 Identities=16% Similarity=0.318 Sum_probs=7.2
Q ss_pred hHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 190 DETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 190 ~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
+.++.+.++. +++++|++ ++++++.+++++ ++++.+.+++++++||++++ ++++|+|.
T Consensus 86 ~~~~~v~~v~-----~~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~lvGivt 143 (494)
T 1vrd_A 86 EQARQVSIVK-----KTENGIIY--DPITVTPDMTVK-EAIDLMAEYKIGGLPVVDEE-GRLVGLLT 143 (494)
T ss_dssp HHHHHHHHHH-----TC--------------------------------------------------
T ss_pred HHHHHHHhhh-----hHhhcCcc--CCeEECCCCCHH-HHHHHHHHcCceEEEEEcCC-CEEEEEEE
Confidence 4456677765 46789986 789999999997 99999999999999999864 68999985
No 112
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=95.88 E-value=0.0013 Score=61.63 Aligned_cols=53 Identities=19% Similarity=0.378 Sum_probs=0.0
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+++++|+|+.+..+++.++++. ++++.+.+++..++||.+++ ++++|++.
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt 205 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLE-KAKEILHQHRIEKLPLVSKD-NKLVGLIT 205 (494)
T ss_dssp -------------------------------------------------------
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEE
Confidence 4578999999988999999999997 99999999999999999864 78999986
No 113
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=95.87 E-value=0.0079 Score=56.20 Aligned_cols=59 Identities=19% Similarity=0.402 Sum_probs=49.3
Q ss_pred HHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEEe
Q 025093 192 TTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 192 ~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~~ 257 (258)
++++.. -.+.+++++|++ ++.+++.+++++ ++.+.+.+++..++||.+++ ++++|++..
T Consensus 210 ~Dll~~---~~~~~v~dim~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVDe~-g~lvGiIT~ 268 (473)
T 2zy9_A 210 RDLIVA---DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTV 268 (473)
T ss_dssp HHHHHS---CTTSBGGGTSBS--SCCCEESSSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEH
T ss_pred HHHhcC---CCCCcHHHHhCC--CCeEEeCCCcHH-HHHHHHHhcCCcEEEEEcCC-CEEEEEEeh
Confidence 345542 367899999985 688999999997 99999999999999999764 789999863
No 114
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=95.83 E-value=0.011 Score=47.28 Aligned_cols=59 Identities=15% Similarity=0.151 Sum_probs=45.6
Q ss_pred HHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 192 TTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 192 ~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
++++....+-.+.+++ +|. ++.+++.++++. ++++.+.+++..++||.+++ ++++|+|.
T Consensus 89 ~Dl~~~~~~~~~~~v~-~~~---~~~~v~~~~~l~-~al~~m~~~~~~~~~Vvde~-g~lvGiIT 147 (173)
T 3ocm_A 89 KDLVADLITEGRVRRN-RLR---DPIIVHESIGIL-RLMDTLKRSRGQLVLVADEF-GAIEGLVT 147 (173)
T ss_dssp HHHHHHHHHHSSCCGG-GSB---CCCEECGGGCHH-HHHHHHHHSTTCCEEEECTT-CCEEEEEC
T ss_pred HHHHHHHhcCCcchhH-hcC---CCeEECCCCcHH-HHHHHHHHcCCeEEEEEeCC-CCEEEEEe
Confidence 4455444333567788 553 467899999997 99999999999999999753 78999985
No 115
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=95.79 E-value=0.0087 Score=52.34 Aligned_cols=52 Identities=15% Similarity=0.278 Sum_probs=45.7
Q ss_pred ccccccccccc----ceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 203 EKTASDAMTPI----AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 203 ~~~v~eiM~PR----~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
+.+++++|.++ .+..+++.++++. ++++.+.+++..++||.+++ ++++|++.
T Consensus 258 ~~~v~~~~~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~l~Vvd~~-g~l~Giit 313 (330)
T 2v8q_E 258 DVSVTKALQHRSHYFEGVLKCYLHETLE-AIINRLVEAEVHRLVVVDEH-DVVKGIVS 313 (330)
T ss_dssp SSBHHHHGGGCCSCCCSCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEE
T ss_pred cCcHHHHHhccccccCCCeEECCCCcHH-HHHHHHHHCCCcEEEEEcCC-CcEEEEEe
Confidence 67899999763 6788999999997 99999999999999999764 68999986
No 116
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=95.32 E-value=0.013 Score=56.61 Aligned_cols=48 Identities=10% Similarity=0.059 Sum_probs=40.6
Q ss_pred cccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEEe
Q 025093 205 TASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 205 ~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~~ 257 (258)
+++|+|++ +..+++.|++++ |+.+.+.+++..++||.|+ ++++|+|..
T Consensus 569 ~v~~iMt~--~pitV~~~~~l~-ea~~~M~~~~i~~lpVve~--G~lvGIVT~ 616 (632)
T 3org_A 569 SLVVPCDV--SPIVVTSYSLVR-QLHFLFVMLMPSMIYVTER--GKLVGIVER 616 (632)
T ss_dssp --CCSCCC--CCCEEETTCBHH-HHHHHHHHTCCSEEEEEET--TEEEEEEEG
T ss_pred ccchhhcC--CCceecCCCcHH-HHHHHHHhcCCCEEEEEEC--CEEEEEEeh
Confidence 48999986 567899999997 9999999999999999943 789999863
No 117
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=95.06 E-value=0.0044 Score=58.44 Aligned_cols=53 Identities=17% Similarity=0.313 Sum_probs=36.0
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+++++|+|+.+..+++.++++. ++++.+.+++..++||.+++ ++++|++.
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt 223 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLK-EANEILQRSKKGKLPIVNDC-DELVAIIA 223 (514)
T ss_dssp ----------CCBCCCCEETTCCST-TTTTHHHHHTCSCCCEESSS-SCCC----
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCCcccEECCC-CeEEEEEE
Confidence 4678999999988999999999998 99999999999999999854 78999875
No 118
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=94.92 E-value=0.0061 Score=57.46 Aligned_cols=57 Identities=9% Similarity=0.307 Sum_probs=26.3
Q ss_pred HHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCC--CCcEEEEEE
Q 025093 192 TTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE--PTNIIGLIL 256 (258)
Q Consensus 192 ~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~--~D~IvGiv~ 256 (258)
.+.++++ ++++++|++ +.++++.++++. ++++.+.+++++++||.+++ .++++|+|.
T Consensus 101 ~~~v~~v-----~~~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt 159 (514)
T 1jcn_A 101 ANEVRKV-----KNFEQGFIT--DPVVLSPSHTVG-DVLEAKMRHGFSGIPITETGTMGSKLVGIVT 159 (514)
T ss_dssp HHHHHHH-----HTCCTTSCS--SCCCCCC------------------CEESCC--------CCEEC
T ss_pred HHHHHhh-----hhhhhcccc--CCEEECCCCCHH-HHHHHHHhcCCCEEEEEeCCCcCCEEEEEEE
Confidence 4455554 378899985 577899999997 99999999999999999864 478999985
No 119
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=94.78 E-value=0.032 Score=52.08 Aligned_cols=52 Identities=17% Similarity=0.295 Sum_probs=45.9
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+++++|++ .+..+++.+++++ ++++.+.+++..++||.+++ ++++|++.
T Consensus 150 ~~~~v~~im~~-~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVd~~-g~lvGivt 201 (491)
T 1zfj_A 150 YNAPISEHMTS-EHLVTAAVGTDLE-TAERILHEHRIEKLPLVDNS-GRLSGLIT 201 (491)
T ss_dssp SSSBTTTSCCC-SCCCCEETTCCHH-HHHHHHHHTTCSEEEEECTT-SBEEEEEE
T ss_pred CCCcHHHHcCC-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEE
Confidence 57899999996 3678899999997 99999999999999999864 78999985
No 120
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=93.80 E-value=0.059 Score=50.78 Aligned_cols=61 Identities=13% Similarity=0.179 Sum_probs=47.5
Q ss_pred HHHHHHhhh---ccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCC---CCcEEEEEE
Q 025093 191 ETTIIAGAL---ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE---PTNIIGLIL 256 (258)
Q Consensus 191 E~~mi~~i~---~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~---~D~IvGiv~ 256 (258)
++++++... ...+.+|+++|++ ++.+++.++++. ++++.+.++++ .||.+++ .++++|||.
T Consensus 435 ~~Dll~~l~~~~~~~~~~V~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT 501 (527)
T 3pc3_A 435 QETLITQIVSMNRQQSDPAIKALNK--RVIRLNESEILG-KLARVLEVDPS--VLILGKNPAGKVELKALAT 501 (527)
T ss_dssp HHHHHHHHHHHCCCTTSBGGGGEET--TCCEEETTSBHH-HHHHHHTTCSE--EEEEEECSSSCEEEEEEEE
T ss_pred HHHHHHHHHhccCcCCCcHHHHhcC--CCeEECCCCcHH-HHHHHHhhCCE--EEEEeCCcccCCeEEEEEE
Confidence 556665554 3457899999985 678899999997 99998866654 6999875 478999986
No 121
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=93.39 E-value=0.014 Score=55.07 Aligned_cols=51 Identities=18% Similarity=0.305 Sum_probs=0.0
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.++.|+|+||| +.++.+.+.+++ |+.+++.+++..++||.+++ ++.+|++.
T Consensus 198 ~~~~V~evMT~--~lvt~~~~~~le-eA~~iL~~~kieklpVVd~~-g~LvGlIT 248 (556)
T 4af0_A 198 AETPIKSVMTT--EVVTGSSPITLE-KANSLLRETKKGKLPIVDSN-GHLVSLVA 248 (556)
T ss_dssp -------------------------------------------------------
T ss_pred cceEhhhhccc--ceEEecCCCCHH-HHHHHHHHccccceeEEccC-CcEEEEEE
Confidence 46789999997 699999999997 99999999999999999764 77888874
No 122
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=92.07 E-value=0.028 Score=52.62 Aligned_cols=51 Identities=25% Similarity=0.471 Sum_probs=0.0
Q ss_pred ccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 202 ~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+.+++++|+| +..+++.+++++ ++++.+.+++.+++||.+++ ++++|++.
T Consensus 148 ~~~~v~~im~~--~~~~v~~~~~l~-eal~~m~~~~~~~lpVVde~-g~lvGiiT 198 (486)
T 2cu0_A 148 EGKLVKELMTK--EVITVPESIEVE-EALKIMIENRIDRLPVVDER-GKLVGLIT 198 (486)
T ss_dssp -------------------------------------------------------
T ss_pred CCCCHHHHccC--CCeEECCcCcHH-HHHHHHHHcCCCEEEEEecC-CeEEEEEE
Confidence 46789999986 678899999997 99999999999999999754 67889875
No 123
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=85.26 E-value=0.63 Score=39.48 Aligned_cols=44 Identities=16% Similarity=0.201 Sum_probs=39.0
Q ss_pred ccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCCCCcEEEEEE
Q 025093 208 DAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLIL 256 (258)
Q Consensus 208 eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~~D~IvGiv~ 256 (258)
.+|.| ..+++..++++. ++.++|.+.|..++||.++ +.++|||.
T Consensus 193 ~~md~--sP~tv~~~tsL~-~v~~LF~~lglr~l~V~~~--GrLVGIVT 236 (250)
T 2d4z_A 193 CRIDQ--SPFQLVEGTSLQ-KTHTLFSLLGLDRAYVTSM--GKLVGVVA 236 (250)
T ss_dssp SCEEC--CSCCBCTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEE
T ss_pred ccccC--CCeEECCCCcHH-HHHHHHHHhCCeEEEEEEC--CEEEEEEE
Confidence 36886 678999999997 9999999999999999974 79999985
No 124
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=75.14 E-value=1 Score=42.50 Aligned_cols=60 Identities=8% Similarity=0.349 Sum_probs=9.5
Q ss_pred HhHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeeeeeCC--CCcEEEEEE
Q 025093 189 HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE--PTNIIGLIL 256 (258)
Q Consensus 189 ~~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PVy~~~--~D~IvGiv~ 256 (258)
+++.++++.+=.+.. .|+ +|-+++..++++. |+++++.+.+||-+||.++. .+..+||+.
T Consensus 128 e~Qa~~V~~VKr~e~-----g~i--~dPvtl~P~~Tv~-da~~l~~~~~isgvpVvd~g~~~~kLvGIvT 189 (556)
T 4af0_A 128 EEQAAMVRRVKKYEN-----GFI--TDPLCLGPDATVG-DVLEIKAKFGFCGVPITETGEPDSKLLGIVT 189 (556)
T ss_dssp HHHHHHHHHHHHCCC-------------------------------------------------------
T ss_pred HHHHHHHHHHHhccc-----Ccc--CCCeEcCCCCCHH-HHHHHHHHhCCCccccccccCcCCEEEEEEe
Confidence 356778887755543 444 3568899999997 99999999999999999763 356999874
No 125
>3fpn_A Geobacillus stearothermophilus UVRA interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=28.20 E-value=94 Score=22.89 Aligned_cols=49 Identities=16% Similarity=0.253 Sum_probs=36.5
Q ss_pred hHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeee
Q 025093 190 DETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPV 243 (258)
Q Consensus 190 ~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PV 243 (258)
...+|++.++.+.+-+=-.++-| +.-+..-... +.++.+++.||+|+=|
T Consensus 5 T~~qivd~il~~~egtri~iLAP----vv~~rKg~~~-~ll~~l~~~Gf~Rvrv 53 (119)
T 3fpn_A 5 TIEQMVDRLLSYPERTKMQILAP----IVSGKKGTHA-KTLEDIRKQGYVRVRI 53 (119)
T ss_dssp CHHHHHHHHHTSCTTCEEEEEEE----EEEEECSCCH-HHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHhCCCCCEEEEEEE----EeeCCCCcHH-HHHHHHHhCCCeEEEE
Confidence 45679999999887665556666 2344555665 8999999999999965
No 126
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=24.71 E-value=84 Score=18.12 Aligned_cols=18 Identities=11% Similarity=0.573 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 025093 12 FIIHIVVIVFLVMFAGLM 29 (258)
Q Consensus 12 ~~~~l~~~~~llllsa~f 29 (258)
.|-.+++.++.+++|.+|
T Consensus 18 y~GLLlifvlavlFssyf 35 (37)
T 3arc_L 18 YLGLLLILVLALLFSSYF 35 (37)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhc
Confidence 466666666677777766
No 127
>2hje_A Autoinducer 2 sensor kinase/phosphatase LUXQ; PER/ARNT/simple-minded (PAS) fold, autoinducer-2 (AI-2), quorum sensing, histidine sensor kinase; 1.70A {Vibrio harveyi} SCOP: d.110.6.3 PDB: 2hj9_C 1zhh_B*
Probab=21.80 E-value=63 Score=26.67 Aligned_cols=18 Identities=22% Similarity=0.521 Sum_probs=16.4
Q ss_pred eeeeeeCCCCcEEEEEEe
Q 025093 240 RVPVYYEEPTNIIGLILV 257 (258)
Q Consensus 240 R~PVy~~~~D~IvGiv~~ 257 (258)
|-||.+...++|+|++|.
T Consensus 121 R~pIi~~~tGeVlG~Ly~ 138 (221)
T 2hje_A 121 RVPILDPSTGEVLGFSFN 138 (221)
T ss_dssp EEEEEETTTTEEEEEEEE
T ss_pred ccceecCCCCcEEEEEEE
Confidence 789999999999999985
No 128
>4dfc_B Uvrabc system protein A; alpha/beta domains, DNA repair, ATP binding, DNA binding, NU excision repair, hydrolase-DNA binding protein complex; 2.80A {Escherichia coli}
Probab=20.57 E-value=1.2e+02 Score=22.61 Aligned_cols=49 Identities=12% Similarity=0.208 Sum_probs=35.9
Q ss_pred hHHHHHHhhhccccccccccccccceEEEEeCCCCccHHHHHHHHHcCCceeee
Q 025093 190 DETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPV 243 (258)
Q Consensus 190 ~E~~mi~~i~~~~~~~v~eiM~PR~~v~~l~~~~~~~~e~~~~~~~~~~SR~PV 243 (258)
...+|++.++.+.+-+=-.++-|- .-+..-... +.++.+++.||+|+=|
T Consensus 7 t~~qivd~il~~~egtki~iLAPv----v~~rKg~~~-~ll~~l~~~Gf~Rvrv 55 (126)
T 4dfc_B 7 TVSQMVDNVLSQPEGKRLMLLAPI----IKERKGEHT-KTLENLASQGYIRARI 55 (126)
T ss_dssp CHHHHHHHTTSSCTTCCEEEEEEE----EEEEESCCH-HHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHhCCCCCEEEEEeEE----EeCCCCcHH-HHHHHHHhCCCeEEEE
Confidence 456799999998876655555662 234445565 8999999999999965
Done!