BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025096
(258 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5FWP8|PCID2_XENLA PCI domain-containing protein 2 OS=Xenopus laevis GN=pcid2 PE=2
SV=1
Length = 399
Score = 214 bits (546), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 173/246 (70%), Gaps = 9/246 (3%)
Query: 8 AGKGSKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYT 67
A + SK+ G L+L QLFKIYFK+ +HLC+ +IR+I+++ EE+ +VT+ YY
Sbjct: 159 AFEDSKKWGMLFLVNQLFKIYFKISKLHLCKPLIRAIDSSNFK--EEYTMAQRVTFKYYV 216
Query: 68 GRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNL 127
GR +F+ +F A++ LS+A +C+ S+ N RMIL YL+PVK+ +G +P LL+KY+L
Sbjct: 217 GRKSMFDSDFKKAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTIHLLKKYDL 276
Query: 128 VEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQK 187
++++ + +A+ G+L LL AL +HE F+R G++L+LEKL++ Y+ LFKK+Y++
Sbjct: 277 MQFAEVTKAVSEGNLLLLTEALTKHETFFIRCGIFLILEKLKIISYRNLFKKVYLLL--- 333
Query: 188 DPSKAHQMKLDVIVKALKWLEM-DMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQD 246
K HQ+ LD + ALK++E+ D+D+DEV+CI+A LI+ +KGY +H+ + +V+SKQ+
Sbjct: 334 ---KTHQLSLDAFLVALKFMEVGDVDIDEVQCIIANLIYMGHIKGYISHQHQKLVVSKQN 390
Query: 247 PFPKLN 252
PFP L+
Sbjct: 391 PFPPLS 396
>sp|Q5JVF3|PCID2_HUMAN PCI domain-containing protein 2 OS=Homo sapiens GN=PCID2 PE=1 SV=2
Length = 399
Score = 214 bits (544), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 110/259 (42%), Positives = 177/259 (68%), Gaps = 15/259 (5%)
Query: 1 MKVFGVLAG------KGSKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEE 54
M F V A + SK+ G L+L QLFKIYFK+ +HLC+ +IR+I+++ + D +
Sbjct: 146 MSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLIRAIDSSNLKD--D 203
Query: 55 FPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIG 114
+ +VTY YY GR +F+ +F A++ LS+A +C+ S+ N RMIL YL+PVK+ +G
Sbjct: 204 YSTAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLG 263
Query: 115 ILPKDWLLEKYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQ 174
+P LL+KY+L++++ + +A+ G+L LL AL +HE F+R G++L+LEKL++ Y+
Sbjct: 264 HMPTVELLKKYHLMQFAEVTRAVSEGNLLLLHEALAKHEAFFIRCGIFLILEKLKIITYR 323
Query: 175 RLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEM-DMDVDEVECIVAILIHKNLVKGYF 233
LFKK+Y++ K HQ+ LD + ALK++++ D+D+DEV+CI+A LI+ VKGY
Sbjct: 324 NLFKKVYLL------LKTHQLSLDAFLVALKFMQVEDVDIDEVQCILANLIYMGHVKGYI 377
Query: 234 AHKSKVVVLSKQDPFPKLN 252
+H+ + +V+SKQ+PFP L+
Sbjct: 378 SHQHQKLVVSKQNPFPPLS 396
>sp|Q8BFV2|PCID2_MOUSE PCI domain-containing protein 2 OS=Mus musculus GN=Pcid2 PE=2 SV=1
Length = 399
Score = 202 bits (514), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/259 (42%), Positives = 175/259 (67%), Gaps = 15/259 (5%)
Query: 1 MKVFGVLAG------KGSKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEE 54
M F V A + SK+ G L+L QLFKIYFK+ +HLC+ +IR+I+++ + D +
Sbjct: 146 MSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLIRAIDSSNLKD--D 203
Query: 55 FPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIG 114
+ ++TY YY GR +F+ +F A++ LS+A +C+ S+ N RMIL YL+PVK+ +G
Sbjct: 204 YSTAQRITYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLG 263
Query: 115 ILPKDWLLEKYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQ 174
+P LL KY+L+++S + +A+ G+L LL AL +HE F+R G++L+LEKL++ Y+
Sbjct: 264 HMPTIELLRKYHLMQFSEVTKAVSEGNLLLLNEALAKHETFFIRCGIFLILEKLKIITYR 323
Query: 175 RLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEM-DMDVDEVECIVAILIHKNLVKGYF 233
LFKK+Y++ K HQ+ LD + ALK++ + D+D+DEV+CI+A LI+ +KGY
Sbjct: 324 NLFKKVYLL------LKTHQLSLDAFLVALKFMHVEDVDIDEVQCILANLIYMGHIKGYI 377
Query: 234 AHKSKVVVLSKQDPFPKLN 252
+H+ + +V+SKQ+PFP L+
Sbjct: 378 SHQHQKLVVSKQNPFPPLS 396
>sp|Q2TBN6|PCID2_BOVIN PCI domain-containing protein 2 OS=Bos taurus GN=PCID2 PE=2 SV=1
Length = 408
Score = 194 bits (492), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 106/262 (40%), Positives = 172/262 (65%), Gaps = 12/262 (4%)
Query: 1 MKVFGVLAG------KGSKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEE 54
M F V A + SK+ G L+L QLFKIYFK+ +HLC+ +IR+I+++ + D +
Sbjct: 146 MGCFRVCASDTRAGIEDSKKRGMLFLVNQLFKIYFKINKLHLCKPLIRAIDSSNLKD--D 203
Query: 55 FPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIG 114
+ +VTY YY GR +F+ +F A++ LS+A +C+ S+ N RM+L YL+PVK+ +G
Sbjct: 204 YSTAQRVTYRYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMVLIYLLPVKMLLG 263
Query: 115 ILPKDWLLEKYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQ 174
+P LL KY+L++++ + +A+ G+L LL AL HE F+R G++L+LEKL++ Y+
Sbjct: 264 HMPTIELLRKYHLMQFAEVTRAVSEGNLLLLNEALAAHETFFIRCGIFLILEKLKIITYR 323
Query: 175 RLFKKIYIIQKQKDPS---KAHQMKLDVIVKALKWLEM-DMDVDEVECIVAILIHKNLVK 230
LFKK+ + K HQ+ LD + ALK++++ D+D+ EV+CI+A LI+ +K
Sbjct: 324 NLFKKVNSLSSASSRYLLLKTHQLSLDAFLVALKFMQVEDVDIAEVQCILANLIYMGHIK 383
Query: 231 GYFAHKSKVVVLSKQDPFPKLN 252
GY +H+ + +V+SKQ+PFP L+
Sbjct: 384 GYISHQHQKLVVSKQNPFPPLS 405
>sp|Q9VTL1|PCID2_DROME PCI domain-containing protein 2 homolog OS=Drosophila melanogaster
GN=PCID2 PE=1 SV=2
Length = 395
Score = 191 bits (486), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 165/259 (63%), Gaps = 15/259 (5%)
Query: 1 MKVFGVLAGKG------SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEE 54
M F V A G +KR+G + L QLFKIYF++ +HLC+ +IR+I+ IF +
Sbjct: 144 MACFRVCAADGRASEEDTKRLGMMNLVNQLFKIYFRINKLHLCKPLIRAIDNC-IFK-DS 201
Query: 55 FPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIG 114
FP +++TY Y+ GR +F+ N+ AA Q LSYA NC + +N R+IL YL+PVK+ +G
Sbjct: 202 FPLPEQITYKYFVGRRAMFDSNYQAAVQYLSYAFSNCPDRFASNKRLILIYLVPVKMLLG 261
Query: 115 ILPKDWLLEKYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQ 174
LP LL++Y+L+ + ++ A++ G++ + + E +RSG+YL++EKL+ VY+
Sbjct: 262 YLPSKSLLQRYDLLLFLDLAMAMKAGNVNRFDEIVRDQELVLIRSGIYLLVEKLKFLVYR 321
Query: 175 RLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEM-DMDVDEVECIVAILIHKNLVKGYF 233
LFKK+++I+ K+HQ+ + + AL ++ + D+ +DE CIVA LI+ +KGY
Sbjct: 322 NLFKKVFVIR------KSHQLDMGDFLSALHFVGLTDVSLDETHCIVANLIYDGKIKGYI 375
Query: 234 AHKSKVVVLSKQDPFPKLN 252
+H +V+SKQ+PFP ++
Sbjct: 376 SHAHNKLVVSKQNPFPSVS 394
>sp|Q5U3P0|PCID2_DANRE PCI domain-containing protein 2 OS=Danio rerio GN=pcid2 PE=2 SV=1
Length = 399
Score = 191 bits (484), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 172/260 (66%), Gaps = 15/260 (5%)
Query: 1 MKVFGVLAGKG------SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEE 54
M F V A SK+ G L+L QLFKIYFK+ +HLC+ +IR+I+++ + D E
Sbjct: 146 MSCFRVCASDNRAGIDDSKKWGMLFLINQLFKIYFKINKLHLCKPLIRAIDSSNLKD--E 203
Query: 55 FPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIG 114
+ +VTY YY GR +F+ +F A++ LS++ +C+ + N R+IL YL+PVK+ +G
Sbjct: 204 YTMAQRVTYKYYVGRKAMFDSDFKPAEECLSFSFTHCHRSCQRNKRLILIYLLPVKMLLG 263
Query: 115 ILPKDWLLEKYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQ 174
+P LL+KY+L++++++ +A+ G+L LL AL +HE F+R G++L+LEKL++ Y+
Sbjct: 264 HMPTHQLLKKYDLMQFADVTRAVSEGNLLLLNAALVKHETFFIRCGIFLILEKLKIITYR 323
Query: 175 RLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEM-DMDVDEVECIVAILIHKNLVKGYF 233
LFKK+Y + + HQ+ L + +L+ ++ D+D+DEV+CI+A LI+ +KGY
Sbjct: 324 NLFKKVYHL------LRTHQLPLAAFLVSLQMTKVEDVDIDEVQCILANLIYMGHIKGYI 377
Query: 234 AHKSKVVVLSKQDPFPKLNG 253
+H+ + +V+SKQ+PFP L+
Sbjct: 378 SHQHQKLVVSKQNPFPPLSS 397
>sp|Q54PX7|PCID2_DICDI PCI domain-containing protein 2 homolog OS=Dictyostelium discoideum
GN=pcid2 PE=3 SV=1
Length = 430
Score = 186 bits (471), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 156/247 (63%), Gaps = 11/247 (4%)
Query: 12 SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLE 71
SK+ AL + QLF+IYFK+ + LC+++I+++E+ E +P +TY ++ GRL
Sbjct: 194 SKKNAALGVVNQLFQIYFKINNLKLCKNLIKTMESPGFPTLESYPLNQVITYRFFNGRLS 253
Query: 72 VFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVEYS 131
VFN + A ++L YA C S N R+IL +L+P++L PK LLEK+ L ++
Sbjct: 254 VFNGQYKKAQEELLYAFNKCPNDSIKNKRLILLFLVPMQLEQCKFPKKSLLEKFKLTQFI 313
Query: 132 NIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSK 191
+IVQ+++ G+++ L H++ F+ G+YL+LEKL++ VY+ LFKK+++I +
Sbjct: 314 DIVQSIKSGNIKQFNECLSTHQNFFISKGIYLILEKLKIIVYRNLFKKVHLI------TT 367
Query: 192 AHQMKLDVIVKALKWLEMD-MDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPK 250
++ + V ALKW+E D +D+DE ECI++ LI+ +KGY +HK +VV S +PFPK
Sbjct: 368 GQRIPIGNFVSALKWMENDAIDIDETECILSNLIYNGYLKGYISHKVALVV-SPTNPFPK 426
Query: 251 LNGKPVN 257
L P+N
Sbjct: 427 L---PLN 430
>sp|Q95QU0|PCID2_CAEEL PCI domain-containing protein 2 homolog OS=Caenorhabditis elegans
GN=C27F2.10 PE=3 SV=1
Length = 413
Score = 168 bits (426), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/257 (37%), Positives = 156/257 (60%), Gaps = 9/257 (3%)
Query: 3 VFGVLAGKGS-KRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKV 61
V V A +G+ K+V L +T QLF+IYF++ ++L + +IR+I+ + +F DKV
Sbjct: 164 VSDVHAEEGTTKKVAMLNMTNQLFQIYFQINKLNLLKPLIRAIDNCGSL-YHDFLMSDKV 222
Query: 62 TYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWL 121
Y Y+ GR +F+ + A++ L YA NC S +N R IL YLIPVK+ +G +P L
Sbjct: 223 AYNYFLGRKAMFDADLNLAEKSLLYAFRNCPADSMSNKRKILIYLIPVKMFLGHMPTSQL 282
Query: 122 LEKYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIY 181
L +Y L E+ ++V ++ G+L L AL +E F++ G++L+LEKL + ++ LFKK+
Sbjct: 283 LHEYRLDEFQDVVAGVKDGNLAQLDGALAANEAFFIKCGIFLMLEKLRMITFRTLFKKVS 342
Query: 182 IIQKQKDPSKAHQMKLDVIVKALKWLEM-DMDVDEVECIVAILIHKNLVKGYFAHKSKVV 240
I Q+ LD AL+++ + D+D+DE+ECI+A LI +KGY +H+ + +
Sbjct: 343 QI------VGTAQIPLDAFQTALRFVGVTDVDMDELECIIANLIASKKIKGYLSHQHQKL 396
Query: 241 VLSKQDPFPKLNGKPVN 257
V+SK + FP L+G N
Sbjct: 397 VISKMNAFPTLSGVSSN 413
>sp|Q60YJ7|PCID2_CAEBR PCI domain-containing protein 2 homolog OS=Caenorhabditis briggsae
GN=CBG18211 PE=3 SV=1
Length = 413
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 157/257 (61%), Gaps = 9/257 (3%)
Query: 3 VFGVLAGKG-SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKV 61
V V A +G +K+V L +T QLF+IYF++ ++L + +IR+I+ + +F DKV
Sbjct: 164 VSDVHAEEGKTKKVAMLNMTNQLFQIYFQINKLNLLKPLIRAIDNCGPL-YNKFLMADKV 222
Query: 62 TYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWL 121
Y Y+ GR +F+ + A++ L YA NC +S +N R IL YLIPVK+ +G +P L
Sbjct: 223 AYNYFLGRKALFDGDLILAEKGLVYAFRNCPTESVSNKRKILVYLIPVKMFLGHMPTASL 282
Query: 122 LEKYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIY 181
L +Y L E+ +V A++ G L + +AL + + F++ G+YLVLEKL Y+ LFKK+
Sbjct: 283 LHRYRLDEFQEVVAAVKDGHLGRVDNALLTNGEFFIKCGIYLVLEKLRTITYRNLFKKVS 342
Query: 182 IIQKQKDPSKAHQMKLDVIVKALKWLEM-DMDVDEVECIVAILIHKNLVKGYFAHKSKVV 240
+ + Q+ LD AL+++ + D+D+DE+ECI+A LI + VKGY AH+ + +
Sbjct: 343 QMVGKV------QIPLDAFQAALRFVGVTDVDMDELECIIANLIAEKKVKGYLAHQHQKL 396
Query: 241 VLSKQDPFPKLNGKPVN 257
V+SK + FP L+ N
Sbjct: 397 VISKTNAFPTLSSVSSN 413
>sp|P0CR48|CSN12_CRYNJ Protein CSN12 homolog OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=CSN12 PE=3
SV=1
Length = 403
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 142/247 (57%), Gaps = 8/247 (3%)
Query: 9 GKGSKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSI-ETARIFDFEEFPKRDKVTYMYYT 67
G+ S+R G + C K YFK+G +LC+++IR++ + + P D+VT+ +Y
Sbjct: 158 GEESRRRGVYHTACLTIKCYFKVGKPNLCKNIIRAVVSDPKTPSVDTAPLPDQVTWHFYI 217
Query: 68 GRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNL 127
G L N AD++LS+AL +C ++ N +IL YLIP++L G P LL ++
Sbjct: 218 GMLAFLNGEDKKADEELSWALKHCPADAKRNQELILTYLIPLRLLHGRFPSASLLSQHPR 277
Query: 128 VE--YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQK 185
+E ++ + A++ GD+ LE + + + V+LV+E+ + LFKK ++
Sbjct: 278 LELVFTPFINAIKNGDVEEYDRRLEWAQVRLVGMSVWLVVERAREGCLRSLFKKAWMAS- 336
Query: 186 QKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQ 245
K+ ++ ++ ALK +D++ DEVEC+VA +I++ +KGY +H+ K+VVL K
Sbjct: 337 ----DKSTRVPIETFRLALKLHGVDVESDEVECMVANMIYRGYLKGYISHEKKMVVLGKT 392
Query: 246 DPFPKLN 252
+PFPK++
Sbjct: 393 NPFPKMS 399
>sp|P0CR49|CSN12_CRYNB Protein CSN12 homolog OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=CSN12 PE=3 SV=1
Length = 403
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 142/247 (57%), Gaps = 8/247 (3%)
Query: 9 GKGSKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSI-ETARIFDFEEFPKRDKVTYMYYT 67
G+ S+R G + C K YFK+G +LC+++IR++ + + P D+VT+ +Y
Sbjct: 158 GEESRRRGVYHTACLTIKCYFKVGKPNLCKNIIRAVVSDPKTPSVDTAPLPDQVTWHFYI 217
Query: 68 GRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNL 127
G L N AD++LS+AL +C ++ N +IL YLIP++L G P LL ++
Sbjct: 218 GMLAFLNGEDKKADEELSWALKHCPADAKRNQELILTYLIPLRLLHGRFPSASLLSQHPR 277
Query: 128 VE--YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQK 185
+E ++ + A++ GD+ LE + + + V+LV+E+ + LFKK ++
Sbjct: 278 LELVFTPFINAIKNGDVEEYDRRLEWAQVRLVGMSVWLVVERAREGCLRSLFKKAWMAS- 336
Query: 186 QKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQ 245
K+ ++ ++ ALK +D++ DEVEC+VA +I++ +KGY +H+ K+VVL K
Sbjct: 337 ----DKSTRVPIETFRLALKLHGVDVESDEVECMVANMIYRGYLKGYISHEKKMVVLGKT 392
Query: 246 DPFPKLN 252
+PFPK++
Sbjct: 393 NPFPKMS 399
>sp|Q4P8T5|CSN12_USTMA Protein CSN12 homolog OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=CSN12 PE=3 SV=1
Length = 454
Score = 134 bits (337), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 131/251 (52%), Gaps = 12/251 (4%)
Query: 12 SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLE 71
S++ G + +FK YF+L +V LCR+++R+I A + D +P+ +VT+ YY G L
Sbjct: 197 SRKWGTYEVVGMVFKTYFRLKSVGLCRNILRAINAADLPDLCAYPRSQQVTFRYYVGVLA 256
Query: 72 VFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYN----- 126
NE + A+ +L +L C+ + N +IL YLIPVKL G LP LL+
Sbjct: 257 FLNEEYDHAELELQASLQMCHRCALINQGLILTYLIPVKLLKGSLPHPSLLDPTTPIGRK 316
Query: 127 LVEYSNIVQALRRGDLRLLRHALEEH--EDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQ 184
L Y +ALR GD++ AL E ++ G Y+ +E+ + L K I+ +
Sbjct: 317 LAVYQPFTRALRTGDVKAFDQALANPTIESSLVKRGTYIAIERARDATLRTLLKTIW-LS 375
Query: 185 KQKDPSKAHQMKLDVIV----KALKWLEMDMDVDEVECIVAILIHKNLVKGYFAHKSKVV 240
+P+ +L + + + + + + E+E I+A LI+K VKGY AH+ V+
Sbjct: 376 LPLNPTNTRPTRLTLTLLHHATSTDLIRLKYSIKELEWILATLIYKGYVKGYIAHERGVL 435
Query: 241 VLSKQDPFPKL 251
VLS +D FP L
Sbjct: 436 VLSAKDAFPAL 446
>sp|O13873|CSN12_SCHPO Protein CSN12 homolog OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=csn12 PE=3 SV=1
Length = 423
Score = 124 bits (310), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 128/242 (52%), Gaps = 8/242 (3%)
Query: 12 SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLE 71
S++ GA Y+ LFK+Y +L VHL +V+R+++ + D FPK V + YY G +
Sbjct: 183 SRKWGAYYIMGLLFKLYLRLDCVHLTNNVLRAMKVVELPDISLFPKSHVVIFHYYLGIVA 242
Query: 72 VFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIG-ILPKDWLLEKY-NLVE 129
N+N+ A +L A C+ N+ +IL Y IP ++ + LP LL K+ NL
Sbjct: 243 FLNQNYKNASAELEIAFSLCHKGYNRNLELILSYWIPTRILVNHQLPTKNLLSKFPNLAS 302
Query: 130 -YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKD 188
Y + +AL+ G+L L+++E ++ +YL LE + LF+K +II
Sbjct: 303 VYIPLTRALKSGNLGEFGKCLQKNETLLAKTKIYLTLEGTRDLCIRNLFRKTWIIC---- 358
Query: 189 PSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPF 248
K+ ++ + V AL+ D+ VE I+A +I K ++GY + + VVLS +DPF
Sbjct: 359 -GKSTRLPVSVFQIALQVAGTDLPKLHVEAILANMISKGYMRGYISRNFETVVLSAKDPF 417
Query: 249 PK 250
PK
Sbjct: 418 PK 419
>sp|Q4WJX0|CSN12_ASPFU Protein CSN12 homolog OS=Neosartorya fumigata (strain ATCC MYA-4609
/ Af293 / CBS 101355 / FGSC A1100) GN=csn12 PE=3 SV=1
Length = 455
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 138/249 (55%), Gaps = 16/249 (6%)
Query: 12 SKRVGALYLTCQLFKIYFKLGTVHLCRSVIR--SIETARIFDFEEFPKRDKVTYMYYTGR 69
S++ G T LFK YFKL +V L ++++R S +A + + E FPK VT+ YY G
Sbjct: 197 SRKWGIYNTTNLLFKTYFKLNSVGLSKNLLRALSASSADLPELEAFPKSHIVTFKYYVGV 256
Query: 70 LEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKL-SIGILPKDWLLEKYNLV 128
+ +EN+ A++ L+YA C+ + N +IL YL+P L + LP LL + +
Sbjct: 257 IHFLDENYREAEEHLAYAWNMCHKGAFKNRELILTYLVPCHLVTTHTLPSQKLLAPFPRL 316
Query: 129 E--YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYI---I 183
E + + +R+GDL A+ E++F++ +YL LE+ + LF+K++I
Sbjct: 317 EKLFRPLCDCIRKGDLVGFDTAMFAGEEEFVKRRIYLPLERGRDIALRNLFRKVFIAGGF 376
Query: 184 QKQKD---PSKAHQMKLDVIVKALK-WLEMD----MDVDEVECIVAILIHKNLVKGYFAH 235
++ KD P + ++ + AL+ D +D+DEVEC+++ LI+K L+KGY A
Sbjct: 377 EESKDGQPPIRRTRVPVAEFAAALRIGTHADDRSRVDIDEVECLLSNLIYKGLMKGYIAR 436
Query: 236 KSKVVVLSK 244
+ +VVLSK
Sbjct: 437 ERGMVVLSK 445
>sp|Q4IMN9|CSN12_GIBZE Protein CSN12 homolog OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=CSN12 PE=3 SV=2
Length = 455
Score = 117 bits (293), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 136/254 (53%), Gaps = 17/254 (6%)
Query: 12 SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSI----ETARIFDFEEFPKRDKVTYMYYT 67
S++ G ++ LFK YFKL + L R++++++ + + E FPK +VT+ +Y
Sbjct: 199 SRKWGIYFVINLLFKTYFKLNSASLSRTILKTLAVYNDKGDMPPLEMFPKSQRVTFKFYE 258
Query: 68 GRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKL-SIGILPKDWLLEKYN 126
G L EN+ A+ L+ A C+ + IL YLIP +L + +LP LLE Y
Sbjct: 259 GVLLFLEENYIKAESHLNEAWQLCHKDAYPQSERILTYLIPCRLLTSHVLPTKALLENYP 318
Query: 127 LVE--YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYII- 183
++ + + ++ G+L+ AL+ E +F++ +YL LE+ + L +K++I
Sbjct: 319 RLQDLFLPLATCIKTGNLQAFDQALQRGEAEFVKRRIYLTLERGRDIALRNLLRKVFIAG 378
Query: 184 ----QKQKDPSKAHQMKLDVIVKALKWLEMD----MDVDEVECIVAILIHKNLVKGYFAH 235
K+ D + + ++ V + + M +D DEVEC++A +I+K+L+KGY A
Sbjct: 379 GFDEAKEADAAPVRRTRIPV-AEFQAAISMGSGHLVDPDEVECMLANMIYKDLMKGYIAR 437
Query: 236 KSKVVVLSKQDPFP 249
+ +VVLSK+ FP
Sbjct: 438 ERGIVVLSKKGAFP 451
>sp|Q7SD63|CSN12_NEUCR Protein CSN12 homolog OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=csn-12
PE=3 SV=1
Length = 461
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 134/260 (51%), Gaps = 22/260 (8%)
Query: 12 SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETAR--IFDFEEFPKRDKVTYMYYTGR 69
S++ G Y+ LFK YFKL + L +++++++ R + FPK +VT+ YY G
Sbjct: 198 SRKWGIYYIINLLFKTYFKLNSASLSKNILKTLSAYRGDMPPLSAFPKSQQVTFKYYEGV 257
Query: 70 LEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVK-LSIGILPKDWLLEKYNLV 128
L EN+ A++ L+ A C+ + N +IL YL+P L+ LP LLE Y +
Sbjct: 258 LCFLEENYFQAEEHLTQAWSLCHKDAMKNKELILTYLVPCHLLTTHTLPSQKLLEPYPRL 317
Query: 129 E--YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYII--- 183
+ + + +++G+L AL++ ED+F++ +YL LE+ + L +K++I
Sbjct: 318 QKLFLPLSNCIKKGELHAFDLALQQGEDEFVKRRIYLTLERGRDIALRNLLRKVFIAGGF 377
Query: 184 --QKQKDPSKAHQMKLDV--IVKALKWLEMDM-DVDEVECIVAILIH---------KNLV 229
K + + + ++ V A+ M + DE+EC++A +I+ KNL+
Sbjct: 378 EESKVEGGPRVRRTRIPVAEFAAAISLGSKQMLETDEIECLMANMIYKLVTNQSGIKNLM 437
Query: 230 KGYFAHKSKVVVLSKQDPFP 249
KGY A + VVLSK FP
Sbjct: 438 KGYIARERGFVVLSKSGAFP 457
>sp|Q6C1L4|CSN12_YARLI Protein CSN12 homolog OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=CSN12 PE=3 SV=1
Length = 396
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 132/246 (53%), Gaps = 10/246 (4%)
Query: 12 SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETAR--IFDFEEFPKRDKVTYMYYTGR 69
SK+ G + +L K+YF L ++ +SVI+ +E+ + +P+ TY YY G
Sbjct: 153 SKKWGTYFFVGELCKLYFLLRKRNMSKSVIKVVESMSRDLPPLASYPRSHTCTYSYYRGV 212
Query: 70 LEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVK-LSIGILPKDWLLEKYNLV 128
L + +++ A L+ AL C +S N +IL +LIPV+ L +P + EK+ +
Sbjct: 213 LSLMDDDVEQAQNWLTQALNQCFYKSTDNQELILLHLIPVQFLMTNQVPSKAVWEKFPRL 272
Query: 129 E--YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQ 186
Y ++ AL RGD+ A+ + F++ +YL +EK+ + V+++LF ++++ +
Sbjct: 273 HTVYHQMLTALLRGDVLSFDKAVTQRRSLFVKKYLYLAVEKMRVFVFEKLFYRVFLAK-- 330
Query: 187 KDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQD 246
KA ++ +D A K + +D+ D +E V+ +I+ + +KGY + + VVL +
Sbjct: 331 ---DKATRITIDDYQAAAKLVGVDVSPDFLEATVSNMIYHDRLKGYISRERHTVVLRAEG 387
Query: 247 PFPKLN 252
FPKL+
Sbjct: 388 AFPKLD 393
>sp|Q9Y820|YON7_SCHPO PCI domain-containing protein C1105.07c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC1105.07c PE=4
SV=1
Length = 442
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 121/228 (53%), Gaps = 11/228 (4%)
Query: 27 IYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSY 86
+YF+L + LC+++ ++ ++ D + VT+ YY GR ++ A L +
Sbjct: 191 LYFRLKQIRLCQTIQANVISSGA-DISRATMAELVTFRYYLGRCHLYQRKIHQAKDHLLF 249
Query: 87 ALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLV-EYSNIVQALRRGDLRLL 145
+ + C + R+ L YL L +G P LLEKY L + +++AL+ GD++
Sbjct: 250 SFLQCPDECYHQKRLSLIYLTTCLLILGKSPTKGLLEKYKLTAAFEPLIKALKSGDIKSF 309
Query: 146 RHALEEHEDQ--FLRSGVYL-VLEKLELQVYQRLFKKIYII---QKQKDPSKAHQMKLDV 199
R +LE++ + F++ G+YL +L++ E+ +++ LF+K+++ Q QK P + L
Sbjct: 310 RLSLEDNSRRKWFIKRGIYLTLLDRCEIILWRNLFRKVFLFTFEQSQKTPHVSGSYLL-- 367
Query: 200 IVKALKWLEMDMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDP 247
L + D+D+VECI LI + +KGY H S +VL K+DP
Sbjct: 368 TAARLSTNDNSYDMDDVECICVSLIDQGYIKGYIIHASSTLVL-KKDP 414
>sp|Q75BU2|CSN12_ASHGO COP9 signalosome complex subunit 12 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSN12
PE=3 SV=2
Length = 412
Score = 104 bits (259), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 128/264 (48%), Gaps = 27/264 (10%)
Query: 9 GKGSKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDF----EEFPKRD--KVT 62
+KR GA Y LF+ Y +LG L ++++ +E+ R D F +R VT
Sbjct: 148 AASNKRHGAYYFALLLFRTYARLGAHSLVTNMVKVLES-RAQDLPPVERAFGERRALTVT 206
Query: 63 YMYYTGRLEVFNE-NFPAADQKLSYALINCNPQSEANIRMILKYLIPVK-LSIGILPKDW 120
Y YY GR ++ + L+ AL+ C+ + ++IL YL+PV L+ PK
Sbjct: 207 YCYYLGRYHACRRADYEKGFRWLNTALLTCHRDHTRHHQLILTYLVPVAFLARRWYPKHH 266
Query: 121 LLEKY------NLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQ 174
++ + + Y+ +V ALR GDL L L + LR G+YL L L +
Sbjct: 267 VIAAWPPPQDPAAIHYAALVAALRSGDLGLYDRELVRMQLPLLRRGLYLPLSHLRPYILL 326
Query: 175 RLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMD-------VDEVECIVAILIHKN 227
RL K ++ + + Q+ + +I AL + +D EC++A LI +
Sbjct: 327 RLVKAVWRLS-----GGSSQLPIRIIAAALAYSTSATPDAGGERLLDHTECLLANLIARG 381
Query: 228 LVKGYFAHKSKVVVLSKQDPFPKL 251
VKGY +H ++V+V+S+ +PFP+L
Sbjct: 382 YVKGYLSHGNRVLVVSRTEPFPRL 405
>sp|Q6BGR7|CSN12_DEBHA Protein CSN12 homolog OS=Debaryomyces hansenii (strain ATCC 36239 /
CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CSN12 PE=3
SV=2
Length = 438
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 140/264 (53%), Gaps = 25/264 (9%)
Query: 12 SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEF-----PKRDKVTYMYY 66
SKR+ + L KIYFKLG + L +SV ++++ R F+ + KR VTY+YY
Sbjct: 173 SKRLDIYFFLGNLIKIYFKLGKLELAKSVEKALKGTR-FNLPKLNGAGSSKRYAVTYLYY 231
Query: 67 TGRLEVFNENFPAADQKLSYAL--INC--NPQSEANIRMILKYLIPVKLSIG--ILPKDW 120
+ L + + +F +++KL A+ ++C +P++ N + ++ + P +
Sbjct: 232 SALLSLDDADFTTSEEKLVKAMEILSCYKDPKNVKNQTEKILIILLPLKLYNKRLTPSNE 291
Query: 121 LLEKYNLVEY---SNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLF 177
+ EK+ +++ N+ A++ G+L+ AL +++ L++ +YL+ E ++ Y +L
Sbjct: 292 IWEKFPKLKFMYKDNLFDAIKNGNLKKFDQALTKYQLILLKNHLYLLFEMMKSLCYLKLV 351
Query: 178 KK-IYIIQKQKDPSKAHQMKLDVIVKALKWLEMDM---------DVDEVECIVAILIHKN 227
KK + II +K+H + L I AL++ D ++D VECI+A LI
Sbjct: 352 KKTVSIIHSLNSETKSHIVPLSAIQLALEFSTNDSYKESDKFAYNLDAVECILANLISSG 411
Query: 228 LVKGYFAHKSKVVVLSKQDPFPKL 251
+KGY +H ++ +VLSK + FP L
Sbjct: 412 KIKGYLSHANRCIVLSKANAFPSL 435
>sp|Q6CPB1|CSN12_KLULA COP9 signalosome complex subunit 12 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=CSN12 PE=3 SV=1
Length = 424
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 131/276 (47%), Gaps = 42/276 (15%)
Query: 12 SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEF-PKRDKVT-------Y 63
++++G Y+ LFK+Y ++ L ++ + E+ F E P ++ +
Sbjct: 158 NRKIGVFYIGTLLFKLYNRIKAYGLLNNMCKVFES----HFNEIGPYLSRINNDLIVIRF 213
Query: 64 MYYTGRLEVFNENFPAADQK-LSYALINCN-----PQSEANIRMILKYLIPVK-LSIGIL 116
+Y G + +N A K L C P + +L YLIP++ L +
Sbjct: 214 KFYMGLYYGYEKNNYALGFKWLQETFDICTLYESIPSTYKVRSQVLIYLIPMRILHLRHY 273
Query: 117 PKDWLLEK-YNLVE--YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVY 173
P+ L + Y V Y+ +V++L G+L+L +E++E ++ +Y+ + K++ V
Sbjct: 274 PRLAPLRRTYPSVAKIYTMLVKSLCTGNLKLYEKFIEDNEFYLVKRNLYVTVLKMKELVE 333
Query: 174 QRLFKKIYIIQKQKDPSKAHQMKLDVIVKALK-------------WLEMDMDVDEVECIV 220
+L KK +I+ ++ LD++ KA + D ++DE+ECI+
Sbjct: 334 LKLVKKAWILN-----GGNTKVPLDMLAKAFQISRGTPCHVTENVAPNHDQELDELECIL 388
Query: 221 AILIHKNLVKGYFAHKSKVVVLSKQDPFPKLNGKPV 256
A LI KN +KGY +H +V++ SK PFP L KP+
Sbjct: 389 ATLISKNYIKGYLSHSHRVMMTSKT-PFPGL-AKPL 422
>sp|P47130|CSN12_YEAST Cop9 signalosome complex subunit 12 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CSN12 PE=1 SV=1
Length = 423
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 117/274 (42%), Gaps = 44/274 (16%)
Query: 12 SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDK----------V 61
+K++G F IY +L + +++++ +E+ + + P +K V
Sbjct: 155 NKKIGCYMFANLEFSIYHRLSNKDMIKNLVKVLESR--VNARDIPPLNKSLAMEHKSQVV 212
Query: 62 TYMYYTGRLEVFNEN-FPAADQKLSYALINCNPQS----------EANIRMILKYLIPVK 110
Y YY G+ EN L+ AL+ C P + + I+ L+P+
Sbjct: 213 LYNYYLGQYYGCLENDHERGFFHLNEALLQC-PMLYVESTGKFVLQGQMEKIMILLVPLA 271
Query: 111 LSIGILPKDW--------LLEKYNLVE-YSNIVQALRRGDLRLLRHALEEHEDQFLRSGV 161
L L W + L + Y +V+++ G+L L HE FL G+
Sbjct: 272 LLTKRLYPHWDHPVIAGVITRSKRLSQVYPTLVRSVISGNLSLYEATAASHERFFLSQGL 331
Query: 162 YLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDE------ 215
++V+ L V+ RL ++ + Q + M L +++ A K + + DE
Sbjct: 332 HVVITLLREVVFTRLVQRCW----QWGNDRKSIMPLKILL-ATKQHDSSANEDEEEQLDA 386
Query: 216 VECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFP 249
+EC +A I L++ Y +H ++ +V SK++PFP
Sbjct: 387 LECRLASAIASGLLRAYLSHSNRCIVFSKKEPFP 420
>sp|Q6FJ48|CSN12_CANGA COP9 signalosome complex subunit 12 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CSN12 PE=3 SV=1
Length = 449
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 26/133 (19%)
Query: 138 RRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKL 197
+ GD + ++EH Q+L G Y + ++ V+ RL K Y + +K + L
Sbjct: 319 KNGDTIVFDELIKEHAAQYLIDGTYSAMLLIKELVFLRLVKVCYKVNDKKSI-----LPL 373
Query: 198 DVIVKALKWLEMDMD---------------------VDEVECIVAILIHKNLVKGYFAHK 236
D+I + + D +DE+EC +A LI +KGY +H
Sbjct: 374 DLIAAGYRIHFRNHDNEENRVTTTNPRKLQKKNEDLLDELECRIANLIANGRIKGYLSHS 433
Query: 237 SKVVVLSKQDPFP 249
+ +VLSK +PFP
Sbjct: 434 QRCMVLSKTEPFP 446
>sp|Q08231|THP1_YEAST Nuclear mRNA export protein THP1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=THP1 PE=1 SV=1
Length = 455
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 15/183 (8%)
Query: 11 GSKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIF-DFEEFPKRDKVTYMYYTGR 69
G +R+ LYL +L IYF++ + LC ++ ++ + + F E+ ++ Y Y GR
Sbjct: 170 GKQRI-LLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGR 228
Query: 70 LEVFNENFPAADQKLSYA---LINCNPQSEA---NIRMILKYLIPVKLSIGILPKDW--- 120
+ N A + + A L+N ++A N IL Y+IP L +G + K W
Sbjct: 229 YYLLNSQVHNAFVQFNEAFQSLLNLPLTNQAITRNGTRILNYMIPTGLILGKMVK-WGPL 287
Query: 121 --LLEKYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFL-RSGVYLVLEKLELQVYQRLF 177
L + + +S + + +R G+++ + L ++E R + ++LEKL + Y+ L
Sbjct: 288 RPFLSQETIDNWSVLYKHVRYGNIQGVSLWLRQNERHLCARQLLIVLLEKLPMVTYRNLI 347
Query: 178 KKI 180
K +
Sbjct: 348 KTV 350
>sp|Q9U5Z8|PSMD3_ANOST Probable 26S proteasome non-ATPase regulatory subunit 3
OS=Anopheles stephensi GN=DOXA2 PE=3 SV=1
Length = 500
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 26/198 (13%)
Query: 63 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIR-MILKYLIPVKLSIGILPKDWL 121
++YY GR++ + A ++L AL Q+ R + K +I V+L +G +P+ +
Sbjct: 255 FLYYLGRIKAAKLEYSVAHKQLVQALRKAPQQAAVGFRQTVQKLVIVVELLLGDIPERKV 314
Query: 122 LE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLF 177
+ +L Y + QA+R G+L+ LE +QF + + ++ +L V +
Sbjct: 315 FRQAALRRSLGPYFQLTQAVRMGNLQRFGEVLENFGEQFRQDHTFTLIIRLRHNVIKTAI 374
Query: 178 KKIYIIQKQKDPSK-AHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLV------- 229
+ I + + P A ++ LD ++ E IVA I ++
Sbjct: 375 RSIGLAYSRISPQDIARKLGLD-------------SPEDAEFIVAKAIRDGVIDATLDPE 421
Query: 230 KGYFAHKSKVVVLSKQDP 247
KGY K + S ++P
Sbjct: 422 KGYMRTKESTDIYSTREP 439
>sp|Q2KJ46|PSMD3_BOVIN 26S proteasome non-ATPase regulatory subunit 3 OS=Bos taurus
GN=PSMD3 PE=2 SV=1
Length = 534
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 63 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMIL-KYLIPVKLSIGILPKDWL 121
Y+YYTGR++ + A + ++ AL + + + K LI V+L +G +P
Sbjct: 288 YLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQ 347
Query: 122 LE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLF 177
K +L+ Y + QA+R G+L L++ ++F G Y ++ +L V +
Sbjct: 348 FRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGV 407
Query: 178 KKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLV-------K 230
+ I + S + D+ K L++D D E IVA I ++ K
Sbjct: 408 RMISL-------SYSRISLADIAQK----LQLDSPED-AEFIVAKAIRDGVIEASINHEK 455
Query: 231 GYFAHKSKVVVLSKQDP 247
GY K + + S ++P
Sbjct: 456 GYVQSKEMIDIYSTREP 472
>sp|O43242|PSMD3_HUMAN 26S proteasome non-ATPase regulatory subunit 3 OS=Homo sapiens
GN=PSMD3 PE=1 SV=2
Length = 534
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 63 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMIL-KYLIPVKLSIGILPKDWL 121
Y+YYTGR++ + A + ++ AL + + + K LI V+L +G +P
Sbjct: 288 YLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQ 347
Query: 122 LE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLF 177
K +L+ Y + QA+R G+L L++ ++F G Y ++ +L V +
Sbjct: 348 FRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGV 407
Query: 178 KKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLV-------K 230
+ I + S + D+ K L++D D E IVA I ++ K
Sbjct: 408 RMISL-------SYSRISLADIAQK----LQLDSPED-AEFIVAKAIRDGVIEASINHEK 455
Query: 231 GYFAHKSKVVVLSKQDP 247
GY K + + S ++P
Sbjct: 456 GYVQSKEMIDIYSTREP 472
>sp|P14685|PSMD3_MOUSE 26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus
GN=Psmd3 PE=1 SV=3
Length = 530
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 63 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMIL-KYLIPVKLSIGILPKDWL 121
Y+YYTGR++ + A + ++ AL + + + K LI V+L +G +P
Sbjct: 284 YLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQ 343
Query: 122 LE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLF 177
K +L+ Y + QA+R G+L L++ ++F G Y ++ +L V +
Sbjct: 344 FRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQTDGTYTLIIRLRHNVIKTGV 403
Query: 178 KKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLV-------K 230
+ I + S + D+ K L++D D E IVA I ++ K
Sbjct: 404 RMISL-------SYSRISLADIAQK----LQLDSPED-AEFIVAKAIRDGVIEASINHEK 451
Query: 231 GYFAHKSKVVVLSKQDP 247
GY K + + S ++P
Sbjct: 452 GYVQSKEMIDIYSTREP 468
>sp|Q1ZXD3|PSMD3_DICDI 26S proteasome non-ATPase regulatory subunit 3 OS=Dictyostelium
discoideum GN=psmD3 PE=1 SV=1
Length = 504
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 25/205 (12%)
Query: 63 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEAN--IRMILKYLIPVKLSIGILPKDW 120
Y YY GR+ + + + L+ A I PQ+ A R + K L V+L +G +P+
Sbjct: 256 YFYYQGRIRAIQLEYAESFKFLTQA-IRKAPQNTAGGFRRTVYKLLSIVQLLMGEIPERN 314
Query: 121 LLE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRL 176
K L Y ++ +A+R GDL ALE++ D F + ++++L V +
Sbjct: 315 TFSQKQLKIALKPYFHLTEAVRVGDLGSFNQALEQNSDIFKSDQTFTLVQRLRSNVIKAG 374
Query: 177 FKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLVK------ 230
KK+ + ++ + I LK+ D ++ I+A I ++
Sbjct: 375 LKKL--------NTAYSRISFNDICTKLKF---DGTTQDIMFIIAKTIKDGVIDATINYE 423
Query: 231 -GYFAHKSKVVVLSKQDPFPKLNGK 254
GY + + S Q+P + +
Sbjct: 424 GGYLQSRENIDAYSTQEPLHAFSNR 448
>sp|O61470|PSMD3_ANOGA Probable 26S proteasome non-ATPase regulatory subunit 3
OS=Anopheles gambiae GN=Dox-A2 PE=3 SV=2
Length = 496
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 84/198 (42%), Gaps = 26/198 (13%)
Query: 63 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIR-MILKYLIPVKLSIGILPKDWL 121
++YY GR++ + A ++L AL Q+ R + K +I V+L +G +P+ +
Sbjct: 251 FLYYLGRIKAAKLEYSVAHKQLVQALRKAPQQAAVGFRQTVQKLVIVVELLLGDIPERKV 310
Query: 122 LE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLF 177
+ +L Y + QA+R G+L+ L +QF + + ++ +L V +
Sbjct: 311 FRQAALRRSLGPYFQLTQAVRMGNLQRFGEVLVNFGEQFRQDHTFTLIIRLRHNVIKTAI 370
Query: 178 KKIYIIQKQKDPSK-AHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLV------- 229
+ I + + P A ++ LD ++ E IVA I ++
Sbjct: 371 RSIGLAYSRISPQDIARKLGLD-------------SPEDAEFIVAKAIRDGVIEATLDPE 417
Query: 230 KGYFAHKSKVVVLSKQDP 247
KGY K + S ++P
Sbjct: 418 KGYMRSKESTDIYSTREP 435
>sp|O42897|RPN3_SCHPO Probable 26S proteasome regulatory subunit rpn3
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rpn3 PE=3 SV=2
Length = 497
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 61 VTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRM---ILKYLIPVKLSIGILP 117
+ Y YY GR+ ++ A + L A I P + ++ + K I V+L +G +P
Sbjct: 248 IRYQYYLGRIRAIQLDYTTAHEHLVSA-IRKAPNTVYAVQFLEAVYKLHIVVQLLMGEIP 306
Query: 118 KDWL-----LEKYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKL 168
+ + LEK LV Y I QA+R GDL AL ++E +F G+Y ++ +L
Sbjct: 307 ERRIFRQKSLEK-TLVPYLRISQAVRIGDLCAFTDALSKYEAEFRFDGLYTLICRL 361
>sp|Q8SRT7|RPN3_ENCCU 26S proteasome regulatory subunit RPN3 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=RPN3 PE=1 SV=1
Length = 376
Score = 38.1 bits (87), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 130 YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDP 189
Y + A++R D++ LE ++D+ + G+Y V ++L V Q +KI ++ +
Sbjct: 232 YFKLASAVKRADIKKFEETLESNKDELMSQGLYFVAKRLSQNVIQEGIRKISVVYSRISY 291
Query: 190 SKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLVKGYFA 234
+ + ++ EVE +V I K L+KG A
Sbjct: 292 EDIAHI-------------LGINSGEVEYLVKRTIRKGLIKGKVA 323
>sp|Q9LNU4|PSD31_ARATH Probable 26S proteasome non-ATPase regulatory subunit 3a
OS=Arabidopsis thaliana GN=EMB2719 PE=1 SV=3
Length = 488
Score = 37.7 bits (86), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 15/195 (7%)
Query: 52 FEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMIL-KYLIPVK 110
FE + Y++Y G++ + A + L A P + R+ K+ I V+
Sbjct: 231 FEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKA-PIAALGFRIQCNKWAILVR 289
Query: 111 LSIGILPKDWLLEKYN----LVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLE 166
L +G +P+ + + L Y + A+R GDL L R E+ D F + + ++
Sbjct: 290 LLLGEIPERSIFTQKGMEKALRPYFELTNAVRIGDLELFRTVQEKFLDTFAQDRTHNLIV 349
Query: 167 KLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHK 226
+L V + + I I ++ L + K L+ L + V + E IVA I
Sbjct: 350 RLRHNVIRTGLRNISI--------SYSRISLPDVAKKLR-LNSENPVADAESIVAKAIRD 400
Query: 227 NLVKGYFAHKSKVVV 241
+ HK+ +V
Sbjct: 401 GAIDATIDHKNGCMV 415
>sp|B2U9R2|SYE_RALPJ Glutamate--tRNA ligase OS=Ralstonia pickettii (strain 12J) GN=gltX
PE=3 SV=1
Length = 465
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Query: 172 VYQRLFKKIYIIQ-KQKDPSKAHQMKLDVIVKALKWLEMDMD---------VDEVECIVA 221
+ R K +I++ + D ++ Q +DVI++A+ WL+MD+D +D +VA
Sbjct: 30 AFARKMKGDFILRIEDTDVERSSQEAVDVILEAMDWLDMDIDEGPFYQMQRMDRYRAVVA 89
Query: 222 ILIHKNLV 229
++ + L
Sbjct: 90 QMVQQELA 97
>sp|Q04908|PSMD3_CAEEL 26S proteasome non-ATPase regulatory subunit 3 OS=Caenorhabditis
elegans GN=rpn-3 PE=1 SV=1
Length = 504
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 59 DKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANI---RMILKYLIPVKLSIGI 115
D YMYY GR++ ++ +A A PQ E I + + K+++ + L G
Sbjct: 252 DLARYMYYQGRIKALQLDYNSAAGYFLQAQRKA-PQ-EGAIGFKQAVQKWVVVIGLLQGE 309
Query: 116 LPKDWLLE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQ 171
+P + + L Y ++ + +R GD+ H LE+ + QF ++ +L
Sbjct: 310 IPDRSVFRQPIYRKCLAHYLDLSRGVRDGDVARFNHNLEQFKTQFEADDTLTLIVRLRQN 369
Query: 172 VYQRLFKKI 180
V + K+I
Sbjct: 370 VIKTAIKQI 378
>sp|Q0K926|SYE_CUPNH Glutamate--tRNA ligase OS=Cupriavidus necator (strain ATCC 17699 /
H16 / DSM 428 / Stanier 337) GN=gltX PE=3 SV=1
Length = 466
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 172 VYQRLFKKIYIIQ-KQKDPSKAHQMKLDVIVKALKWLEMDMD 212
+ R K +I++ + D ++ Q +DVI++++ WLEMD+D
Sbjct: 30 AFARRMKGDFILRIEDTDVERSSQEAVDVILESMAWLEMDID 71
>sp|P47481|LON_MYCGE Lon protease OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 /
NCTC 10195) GN=lon PE=3 SV=1
Length = 795
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 68 GRLEVFNENFPAAD-QKLSYALINCNPQSEANIRMILKYLIPVKLSIGIL--PKDWLLEK 124
G V E F AD ++SY L+N + EAN+ L+ + P K I L + LE
Sbjct: 96 GLQRVLIEKFSDADINEVSYQLLNSTVKDEANVDRFLQRIFPEKEEIEQLMEGAEKFLEL 155
Query: 125 YNLVEYSNIVQALRRGDL 142
N+ + N+ + L++ D+
Sbjct: 156 ENISKTVNVPKGLKQLDI 173
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.141 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,888,289
Number of Sequences: 539616
Number of extensions: 3684833
Number of successful extensions: 11075
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 10975
Number of HSP's gapped (non-prelim): 51
length of query: 258
length of database: 191,569,459
effective HSP length: 115
effective length of query: 143
effective length of database: 129,513,619
effective search space: 18520447517
effective search space used: 18520447517
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 60 (27.7 bits)