Query 025099
Match_columns 258
No_of_seqs 196 out of 1486
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 02:40:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025099.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025099hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15004 alpha-ribazole phosph 100.0 3.1E-39 6.8E-44 270.9 20.2 174 81-257 1-178 (199)
2 PRK14116 gpmA phosphoglyceromu 100.0 4E-39 8.8E-44 275.6 20.4 178 80-257 1-211 (228)
3 PRK13463 phosphatase PhoE; Pro 100.0 5.5E-39 1.2E-43 270.3 20.3 174 80-256 2-180 (203)
4 PRK14119 gpmA phosphoglyceromu 100.0 7.2E-39 1.6E-43 274.1 21.4 178 80-257 1-211 (228)
5 PRK03482 phosphoglycerate muta 100.0 4.5E-38 9.9E-43 266.8 20.6 175 80-257 1-179 (215)
6 TIGR03162 ribazole_cobC alpha- 100.0 6.5E-38 1.4E-42 257.7 20.0 170 83-257 1-174 (177)
7 PRK14117 gpmA phosphoglyceromu 100.0 9.1E-38 2E-42 267.5 20.7 178 80-257 1-211 (230)
8 PRK01295 phosphoglyceromutase; 100.0 1.8E-37 3.8E-42 261.6 22.1 176 80-256 2-186 (206)
9 PRK01112 phosphoglyceromutase; 100.0 1.3E-37 2.8E-42 266.1 21.0 176 80-257 1-210 (228)
10 PRK14118 gpmA phosphoglyceromu 100.0 1.9E-37 4.1E-42 265.2 20.7 177 81-257 1-210 (227)
11 COG0406 phoE Broad specificity 100.0 6.1E-37 1.3E-41 258.3 21.0 176 80-257 2-182 (208)
12 PRK14120 gpmA phosphoglyceromu 100.0 9.1E-37 2E-41 263.8 21.7 179 79-257 3-212 (249)
13 TIGR03848 MSMEG_4193 probable 100.0 7.5E-37 1.6E-41 257.4 19.5 171 82-257 1-181 (204)
14 PRK13462 acid phosphatase; Pro 100.0 1.2E-36 2.6E-41 255.9 19.3 168 78-257 3-176 (203)
15 TIGR01258 pgm_1 phosphoglycera 100.0 2.3E-36 5E-41 260.9 20.9 176 81-257 1-210 (245)
16 PRK14115 gpmA phosphoglyceromu 100.0 2.8E-36 6.1E-41 260.7 20.8 176 81-257 1-210 (247)
17 PRK07238 bifunctional RNase H/ 100.0 2.4E-35 5.2E-40 269.3 23.9 179 75-256 166-348 (372)
18 PF00300 His_Phos_1: Histidine 100.0 1.6E-34 3.4E-39 231.8 13.1 156 82-239 1-158 (158)
19 KOG0235 Phosphoglycerate mutas 100.0 1.1E-33 2.5E-38 235.8 17.0 169 79-247 4-179 (214)
20 smart00855 PGAM Phosphoglycera 100.0 1.3E-32 2.9E-37 221.5 15.0 151 82-239 1-155 (155)
21 COG0588 GpmA Phosphoglycerate 100.0 7.4E-33 1.6E-37 227.1 13.5 176 80-255 1-209 (230)
22 PTZ00322 6-phosphofructo-2-kin 100.0 7.2E-32 1.6E-36 262.4 18.1 172 80-257 419-619 (664)
23 PTZ00123 phosphoglycerate muta 100.0 2E-30 4.3E-35 223.0 19.5 165 93-257 1-198 (236)
24 cd07067 HP_PGM_like Histidine 99.9 8.2E-26 1.8E-30 181.1 15.4 131 82-257 1-136 (153)
25 PTZ00122 phosphoglycerate muta 99.9 8.5E-26 1.8E-30 200.0 16.2 150 81-257 103-269 (299)
26 KOG4754 Predicted phosphoglyce 99.9 3.5E-23 7.7E-28 169.5 13.8 167 79-246 13-202 (248)
27 cd07040 HP Histidine phosphata 99.9 1.2E-22 2.7E-27 161.9 15.0 128 82-257 1-136 (153)
28 TIGR00249 sixA phosphohistidin 99.9 2.4E-20 5.1E-25 150.0 15.8 129 81-255 1-131 (152)
29 PRK10848 phosphohistidine phos 99.8 1.6E-19 3.4E-24 146.3 15.9 130 81-256 1-132 (159)
30 KOG0234 Fructose-6-phosphate 2 99.8 8.3E-20 1.8E-24 165.3 12.8 160 79-247 238-398 (438)
31 PRK06193 hypothetical protein; 99.8 1.5E-19 3.2E-24 151.4 13.1 129 80-245 42-176 (206)
32 KOG3734 Predicted phosphoglyce 99.8 1.6E-19 3.5E-24 155.1 13.2 163 80-247 12-217 (272)
33 PRK15416 lipopolysaccharide co 99.8 5.8E-19 1.3E-23 146.7 13.9 122 79-247 53-174 (201)
34 KOG4609 Predicted phosphoglyce 99.8 4.8E-19 1E-23 145.5 9.7 150 79-256 93-253 (284)
35 COG2062 SixA Phosphohistidine 99.8 2.9E-18 6.4E-23 137.9 13.9 122 80-246 1-123 (163)
36 cd07061 HP_HAP_like Histidine 98.1 5E-06 1.1E-10 71.5 6.6 60 81-151 4-74 (242)
37 PF00328 His_Phos_2: Histidine 97.2 0.00071 1.5E-08 60.3 6.6 46 106-151 62-117 (347)
38 KOG3720 Lysosomal & prostatic 95.7 0.047 1E-06 50.8 8.0 71 80-150 35-127 (411)
39 PRK10173 glucose-1-phosphatase 95.6 0.071 1.5E-06 49.7 8.7 70 81-150 33-128 (413)
40 PRK10172 phosphoanhydride phos 95.4 0.072 1.6E-06 49.8 8.1 70 81-150 36-130 (436)
41 KOG1057 Arp2/3 complex-interac 91.2 0.33 7.2E-06 47.9 4.9 45 106-150 511-571 (1018)
42 KOG1382 Multiple inositol poly 85.9 1.6 3.6E-05 40.8 5.5 47 105-151 131-183 (467)
43 KOG3672 Histidine acid phospha 73.9 11 0.00024 34.7 6.4 43 106-148 168-224 (487)
44 COG2247 LytB Putative cell wal 63.4 46 0.001 30.0 8.0 111 129-247 30-154 (337)
45 PLN02517 phosphatidylcholine-s 60.2 19 0.00041 35.3 5.4 40 200-239 188-227 (642)
46 PF14606 Lipase_GDSL_3: GDSL-l 60.0 8.2 0.00018 31.7 2.6 32 203-234 72-103 (178)
47 KOG2369 Lecithin:cholesterol a 57.3 19 0.00042 34.0 4.8 44 200-243 157-200 (473)
48 PF12048 DUF3530: Protein of u 52.7 34 0.00074 30.5 5.6 41 206-247 175-215 (310)
49 PF07819 PGAP1: PGAP1-like pro 41.1 46 0.001 28.2 4.4 34 201-234 56-94 (225)
50 PRK00035 hemH ferrochelatase; 40.4 2.7E+02 0.0059 24.9 10.9 19 104-122 69-87 (333)
51 PF02450 LCAT: Lecithin:choles 40.2 38 0.00082 31.3 4.0 32 203-235 98-129 (389)
52 PF05990 DUF900: Alpha/beta hy 37.9 69 0.0015 27.2 5.0 47 200-246 68-114 (233)
53 TIGR03729 acc_ester putative p 36.6 72 0.0016 26.9 5.0 39 200-238 140-178 (239)
54 COG1125 OpuBA ABC-type proline 36.6 70 0.0015 28.3 4.7 26 208-234 171-196 (309)
55 PF01764 Lipase_3: Lipase (cla 36.2 79 0.0017 23.8 4.7 39 206-244 45-85 (140)
56 PRK02395 hypothetical protein; 35.7 2.7E+02 0.006 24.3 8.6 62 80-162 1-67 (279)
57 COG1134 TagH ABC-type polysacc 30.8 88 0.0019 27.1 4.4 28 205-234 180-207 (249)
58 COG1136 SalX ABC-type antimicr 30.0 1.2E+02 0.0026 25.9 5.1 41 200-241 170-210 (226)
59 PRK04946 hypothetical protein; 27.7 2.2E+02 0.0049 23.4 6.2 45 200-246 101-148 (181)
60 cd00519 Lipase_3 Lipase (class 26.5 1.9E+02 0.0041 24.0 5.8 42 203-244 106-149 (229)
61 cd00741 Lipase Lipase. Lipase 25.9 1E+02 0.0022 23.8 3.8 43 203-245 6-50 (153)
62 PLN02733 phosphatidylcholine-s 25.8 1.6E+02 0.0034 27.9 5.6 41 204-244 141-181 (440)
63 COG1116 TauB ABC-type nitrate/ 24.7 1.2E+02 0.0026 26.4 4.2 34 206-240 164-197 (248)
64 COG1416 Uncharacterized conser 23.7 1.8E+02 0.0039 22.0 4.5 40 205-244 13-52 (112)
65 PLN02847 triacylglycerol lipas 23.5 1.7E+02 0.0037 28.9 5.3 42 205-246 231-274 (633)
66 COG0761 lytB 4-Hydroxy-3-methy 23.4 59 0.0013 28.8 2.1 26 132-158 12-37 (294)
67 cd04256 AAK_P5CS_ProBA AAK_P5C 23.4 1.2E+02 0.0027 26.6 4.2 29 206-236 31-59 (284)
68 COG2344 AT-rich DNA-binding pr 23.1 1.1E+02 0.0024 25.6 3.5 38 210-247 70-107 (211)
69 COG0488 Uup ATPase components 23.1 87 0.0019 30.4 3.4 40 207-247 184-224 (530)
70 COG0549 ArcC Carbamate kinase 22.9 1.2E+02 0.0026 27.1 3.8 32 203-234 20-51 (312)
71 COG2138 Sirohydrochlorin ferro 22.9 82 0.0018 27.2 2.9 66 80-161 2-70 (245)
72 COG0634 Hpt Hypoxanthine-guani 22.7 1.6E+02 0.0034 24.2 4.3 29 203-231 13-41 (178)
73 PF13479 AAA_24: AAA domain 22.5 1.6E+02 0.0035 24.4 4.6 35 200-235 104-138 (213)
74 PRK09177 xanthine-guanine phos 22.2 2.7E+02 0.0058 22.1 5.6 46 202-247 10-56 (156)
75 COG1117 PstB ABC-type phosphat 21.7 1.1E+02 0.0024 26.3 3.3 28 209-239 186-213 (253)
76 PLN02162 triacylglycerol lipas 20.4 2.3E+02 0.005 27.1 5.5 35 207-241 260-296 (475)
77 PF09370 TIM-br_sig_trns: TIM- 20.2 69 0.0015 28.1 1.8 36 200-237 190-225 (268)
78 PF10116 Host_attach: Protein 20.0 3.9E+02 0.0085 20.4 6.0 42 204-245 71-112 (138)
No 1
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=100.00 E-value=3.1e-39 Score=270.86 Aligned_cols=174 Identities=25% Similarity=0.302 Sum_probs=159.0
Q ss_pred eEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhhCCccEEEECChHHHHHHHHHHHHHcCCcceEECCC
Q 025099 81 CEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPE 160 (258)
Q Consensus 81 ~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~~~~~~I~sSPl~Ra~qTA~~i~~~l~~~~v~~~~~ 160 (258)
|+||||||||+.+|..+.++|+.|.|||+.|++||+.+++.| ...+++.|||||+.||+|||+++++..+ .++.++++
T Consensus 1 ~~i~lvRHG~t~~n~~~~~~G~~d~pLt~~G~~Qa~~~~~~l-~~~~~~~i~sSpl~Ra~qTA~~i~~~~~-~~~~~~~~ 78 (199)
T PRK15004 1 MRLWLVRHGETQANVDGLYSGHAPTPLTARGIEQAQNLHTLL-RDVPFDLVLCSELERAQHTARLVLSDRQ-LPVHIIPE 78 (199)
T ss_pred CeEEEEeCCCCccccCCcEeCCCCCCcCHHHHHHHHHHHHHH-hCCCCCEEEECchHHHHHHHHHHHhcCC-CCceeChh
Confidence 579999999999999999999999999999999999999999 4578899999999999999999998877 78999999
Q ss_pred cccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHH
Q 025099 161 LRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLY 240 (258)
Q Consensus 161 L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l~ 240 (258)
|+|+++|.|+|++..++.+.+|+.|..|..++.....| +|||+.++..|+.++++.+.+..++++|||||||++|++++
T Consensus 79 L~E~~~G~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gEs~~~~~~Rv~~~l~~l~~~~~~~~iliVsHg~~i~~l~ 157 (199)
T PRK15004 79 LNEMFFGDWEMRHHRDLMQEDAENYAAWCNDWQHAIPT-NGEGFQAFSQRVERFIARLSAFQHYQNLLIVSHQGVLSLLI 157 (199)
T ss_pred heeCCCcccCCCCHHHHHHHCHHHHHHHHhChhhcCCC-CCcCHHHHHHHHHHHHHHHHHhCCCCeEEEEcChHHHHHHH
Confidence 99999999999999999999999999887765444444 89999999999999999999877778999999999999999
Q ss_pred HHhcCCC----CCCCCCCCCC
Q 025099 241 QRACPNK----KPEVISTKQD 257 (258)
Q Consensus 241 ~~l~~~~----~~~~l~N~s~ 257 (258)
+++++.+ +.+.+.|||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~ 178 (199)
T PRK15004 158 ARLLGMPAEAMWHFRVEQGCW 178 (199)
T ss_pred HHHhCCCHHHHhccccCCceE
Confidence 9999998 5667888874
No 2
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=4e-39 Score=275.61 Aligned_cols=178 Identities=24% Similarity=0.381 Sum_probs=154.2
Q ss_pred ceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC--cceE
Q 025099 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG--LKVI 156 (258)
Q Consensus 80 ~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~~--~~v~ 156 (258)
|++||||||||+.+|..+.++|+.|.|||+.|++||+.+++.|+.. .++|.|||||+.||+|||++|++..+. .++.
T Consensus 1 m~~l~LVRHGeT~~N~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~qTA~~i~~~~~~~~~~~~ 80 (228)
T PRK14116 1 MAKLVLIRHGQSEWNLSNQFTGWVDVDLSEKGVEEAKKAGRLIKEAGLEFDQAYTSVLTRAIKTLHYALEESDQLWIPET 80 (228)
T ss_pred CCEEEEEeCCCCCCccccCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCcCCCCcc
Confidence 6899999999999999999999999999999999999999999653 689999999999999999999876542 5678
Q ss_pred ECCCcccccCCCCCCCCHHHHHhhChHH-HHHhhcCCC-----------------------CCCCCCCCCCHHHHHHHHH
Q 025099 157 EDPELRERHLGDLQGLVFREAAKVCPIA-YQAFLSGKT-----------------------DQDIPGGGESLDQLYRRCT 212 (258)
Q Consensus 157 ~~~~L~E~~~g~~~g~~~~~~~~~~p~~-~~~~~~~~~-----------------------~~~~p~~gEs~~~~~~Rv~ 212 (258)
++++|+|++||.|+|++.+++.+.+|+. +..|..+.. ....+++|||+.++.+|+.
T Consensus 81 ~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgGEs~~~~~~Rv~ 160 (228)
T PRK14116 81 KTWRLNERHYGALQGLNKKETAEKYGDEQVHIWRRSYDVLPPLLDADDEGSAAKDRRYANLDPRIIPGGENLKVTLERVI 160 (228)
T ss_pred cCcccccccchhhcCCCHHHHHHHhhhhHHHHHhhcccccCcccccccccccccchhhhccCccCCCCCCCHHHHHHHHH
Confidence 8999999999999999999999999986 555654311 0112349999999999999
Q ss_pred HHHHHHHH-h-CCCCeEEEEechHHHHHHHHHhcCCC----CCCCCCCCCC
Q 025099 213 SALQRIAR-K-HIGERIVVVTHGGVIRTLYQRACPNK----KPEVISTKQD 257 (258)
Q Consensus 213 ~~~~~l~~-~-~~~~~vlIVsHg~~i~~l~~~l~~~~----~~~~l~N~s~ 257 (258)
.++++++. . .++++|||||||++|+++++++++.+ +.+.++|||.
T Consensus 161 ~~l~~~i~~~~~~~~~vlvVsHg~vir~ll~~~~~~~~~~~~~~~~~~~~~ 211 (228)
T PRK14116 161 PFWEDHIAPDLLDGKNVIIAAHGNSLRALTKYIENISDEDIMNLEMATGEP 211 (228)
T ss_pred HHHHHHHHHhhcCCCeEEEEcChHHHHHHHHHHhCCCHHHHHhccCCCCCe
Confidence 99999764 2 35789999999999999999999999 5777899875
No 3
>PRK13463 phosphatase PhoE; Provisional
Probab=100.00 E-value=5.5e-39 Score=270.27 Aligned_cols=174 Identities=28% Similarity=0.440 Sum_probs=158.4
Q ss_pred ceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhhCCccEEEECChHHHHHHHHHHHHHcCCcceEECC
Q 025099 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDP 159 (258)
Q Consensus 80 ~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~~~~~~I~sSPl~Ra~qTA~~i~~~l~~~~v~~~~ 159 (258)
+++||||||||+.+|..+.++|+.|.|||+.|++||+.+++.| ...+++.|||||+.||+|||+++++.++ .++.+++
T Consensus 2 ~~~i~lvRHG~t~~n~~~~~~G~~d~~Lt~~G~~Qa~~~~~~l-~~~~~~~i~sSpl~Ra~qTA~~i~~~~~-~~~~~~~ 79 (203)
T PRK13463 2 KTTVYVTRHGETEWNVAKRMQGRKNSALTENGILQAKQLGERM-KDLSIHAIYSSPSERTLHTAELIKGERD-IPIIADE 79 (203)
T ss_pred ceEEEEEeCCCCccchhCcccCCCCCCcCHHHHHHHHHHHHHh-cCCCCCEEEECCcHHHHHHHHHHHhcCC-CCceECc
Confidence 3789999999999999999999999999999999999999999 4568899999999999999999988777 7899999
Q ss_pred CcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHH
Q 025099 160 ELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTL 239 (258)
Q Consensus 160 ~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l 239 (258)
+|+|+++|.|+|++.+++.+.||+.+..|+.++.....| +|||+.++..|+..+++.+..+..+++|+|||||++|+++
T Consensus 80 ~l~E~~~G~~eG~~~~e~~~~~p~~~~~~~~~~~~~~~~-~gEs~~~~~~R~~~~l~~i~~~~~~~~vlvVsHg~~ir~~ 158 (203)
T PRK13463 80 HFYEINMGIWEGQTIDDIERQYPDDIQLFWNEPHLFQST-SGENFEAVHKRVIEGMQLLLEKHKGESILIVSHAAAAKLL 158 (203)
T ss_pred CceeCCCCccCCCcHHHHhhhCHHHHHHHHhChhccCCC-CCeEHHHHHHHHHHHHHHHHHhCCCCEEEEEeChHHHHHH
Confidence 999999999999999999999999999998877665556 8999999999999999999887778899999999999999
Q ss_pred HHHhcCCC----CCC-CCCCCC
Q 025099 240 YQRACPNK----KPE-VISTKQ 256 (258)
Q Consensus 240 ~~~l~~~~----~~~-~l~N~s 256 (258)
++++++.+ +.. .+.|||
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~ 180 (203)
T PRK13463 159 VGHFAGIEIENVWDDPFMHSAS 180 (203)
T ss_pred HHHHhCCCHHHHhhccCccCce
Confidence 99999998 222 357765
No 4
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=7.2e-39 Score=274.13 Aligned_cols=178 Identities=27% Similarity=0.341 Sum_probs=154.1
Q ss_pred ceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC--cceE
Q 025099 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG--LKVI 156 (258)
Q Consensus 80 ~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~~--~~v~ 156 (258)
|++||||||||+.+|..+.++|+.|.|||+.|++||+.++++|+.. ..++.|||||+.||+|||++|++..+. .++.
T Consensus 1 m~~l~LvRHGeT~~N~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~~TA~~i~~~~~~~~~~~~ 80 (228)
T PRK14119 1 MPKLILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPVY 80 (228)
T ss_pred CCEEEEEeCCCCCcccCCCccCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEeCccHHHHHHHHHHHHhcccCCCCee
Confidence 6789999999999999999999999999999999999999999654 679999999999999999999876532 5788
Q ss_pred ECCCcccccCCCCCCCCHHHHHhhChHH-HHHhhcCCCCC-----------------------CCCCCCCCHHHHHHHHH
Q 025099 157 EDPELRERHLGDLQGLVFREAAKVCPIA-YQAFLSGKTDQ-----------------------DIPGGGESLDQLYRRCT 212 (258)
Q Consensus 157 ~~~~L~E~~~g~~~g~~~~~~~~~~p~~-~~~~~~~~~~~-----------------------~~p~~gEs~~~~~~Rv~ 212 (258)
++++|+|++||.|+|++.+++.+.+|+. +..|....... ..+++|||+.++..|+.
T Consensus 81 ~~~~LrE~~fG~weG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~ 160 (228)
T PRK14119 81 KSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRVI 160 (228)
T ss_pred ECCCccccccccccCCcHHHHHHHccHHHHHHHHcccccCCCcccccccccccccccccccccccCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999986 45565432111 11248999999999999
Q ss_pred HHHHHHHHhC--CCCeEEEEechHHHHHHHHHhcCCC----CCCCCCCCCC
Q 025099 213 SALQRIARKH--IGERIVVVTHGGVIRTLYQRACPNK----KPEVISTKQD 257 (258)
Q Consensus 213 ~~~~~l~~~~--~~~~vlIVsHg~~i~~l~~~l~~~~----~~~~l~N~s~ 257 (258)
.++++++.+. ++++|||||||++|+++++++++.+ +.+.+.||+.
T Consensus 161 ~~l~~~~~~~~~~~~~vlvVsHg~vir~l~~~~~~~~~~~~~~~~~~~~~~ 211 (228)
T PRK14119 161 PFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDIINYEIKTGAP 211 (228)
T ss_pred HHHHHHHHhhccCCCeEEEEeChHHHHHHHHHHhCCCHHHHhhcCCCCCce
Confidence 9999987654 5689999999999999999999988 5667888874
No 5
>PRK03482 phosphoglycerate mutase; Provisional
Probab=100.00 E-value=4.5e-38 Score=266.81 Aligned_cols=175 Identities=34% Similarity=0.472 Sum_probs=151.2
Q ss_pred ceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhhCCccEEEECChHHHHHHHHHHHHHcCCcceEECC
Q 025099 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDP 159 (258)
Q Consensus 80 ~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~~~~~~I~sSPl~Ra~qTA~~i~~~l~~~~v~~~~ 159 (258)
|++||||||||+.+|..+.++|+.|.|||+.|++||+.++++| ...+++.|||||+.||+|||++|++.++ .++.+++
T Consensus 1 m~~i~lvRHG~t~~n~~~~~~g~~d~~Lt~~G~~qA~~~~~~l-~~~~~~~I~sSpl~Ra~qTA~~i~~~~~-~~~~~~~ 78 (215)
T PRK03482 1 MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVAERA-KELGITHIISSDLGRTRRTAEIIAQACG-CDIIFDP 78 (215)
T ss_pred CcEEEEEeCCCcccccccccCCCCCCCcCHHHHHHHHHHHHHH-hcCCCCEEEECCcHHHHHHHHHHHHhcC-CCeeECh
Confidence 6899999999999999988999999999999999999999999 4568899999999999999999999888 7899999
Q ss_pred CcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHH
Q 025099 160 ELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTL 239 (258)
Q Consensus 160 ~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l 239 (258)
+|+|+++|.|+|++.+++...++.....+.........| +|||+.++..|+..+++.+...+++++|||||||++|+++
T Consensus 79 ~L~E~~~G~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~p-~gEs~~~~~~Rv~~~l~~~~~~~~~~~vliVsHg~~i~~l 157 (215)
T PRK03482 79 RLRELNMGVLEKRHIDSLTEEEEGWRRQLVNGTVDGRIP-EGESMQELSDRMHAALESCLELPQGSRPLLVSHGIALGCL 157 (215)
T ss_pred hccccCCccccCCcHHHHHhhHHHHHHhhhcCCCccCCC-CCccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH
Confidence 999999999999999887654332222222233334445 8999999999999999999877677889999999999999
Q ss_pred HHHhcCCC----CCCCCCCCCC
Q 025099 240 YQRACPNK----KPEVISTKQD 257 (258)
Q Consensus 240 ~~~l~~~~----~~~~l~N~s~ 257 (258)
++++++.+ ..+.+.|||.
T Consensus 158 ~~~l~~~~~~~~~~~~~~n~si 179 (215)
T PRK03482 158 VSTILGLPAWAERRLRLRNCSI 179 (215)
T ss_pred HHHHhCCChhhhhccCCCCcEE
Confidence 99999998 4567899874
No 6
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=100.00 E-value=6.5e-38 Score=257.73 Aligned_cols=170 Identities=35% Similarity=0.551 Sum_probs=154.4
Q ss_pred EEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhhCCccEEEECChHHHHHHHHHHHHHcCCcceEECCCcc
Q 025099 83 IIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELR 162 (258)
Q Consensus 83 i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~~~~~~I~sSPl~Ra~qTA~~i~~~l~~~~v~~~~~L~ 162 (258)
||||||||+.+|..+.+ |+.|.|||+.|++||+.++++| ....++.|||||+.||+|||+.+++.++ .++.+++.|+
T Consensus 1 i~lvRHg~t~~n~~~~~-g~~d~~Lt~~G~~qa~~l~~~l-~~~~~~~i~sSpl~Ra~qTA~~i~~~~~-~~~~~~~~L~ 77 (177)
T TIGR03162 1 LYLIRHGETDVNAGLCY-GQTDVPLAEKGAEQAAALREKL-ADVPFDAVYSSPLSRCRELAEILAERRG-LPIIKDPRLR 77 (177)
T ss_pred CEEEeCCCCccCCCcee-CCCCCCcChhHHHHHHHHHHHh-cCCCCCEEEECchHHHHHHHHHHHhhcC-CCceECCccc
Confidence 69999999999998888 8899999999999999999999 4578999999999999999999999887 7799999999
Q ss_pred cccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHHH
Q 025099 163 ERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQR 242 (258)
Q Consensus 163 E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l~~~ 242 (258)
|+++|.|+|++.+++.+.+| .+..|..++.....| +||++.++..|+..+++++.++.++++|||||||++|++++++
T Consensus 78 E~~~G~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~-~gEs~~~~~~R~~~~~~~l~~~~~~~~vlvVsHg~~i~~l~~~ 155 (177)
T TIGR03162 78 EMDFGDWEGRSWDEIPEAYP-ELDAWAADWQHARPP-GGESFADFYQRVSEFLEELLKAHEGDNVLIVTHGGVIRALLAH 155 (177)
T ss_pred cccCCccCCCCHHHHHHhCH-HHHHHHhCcccCCCc-CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHH
Confidence 99999999999999999888 577777665544555 8999999999999999999987677899999999999999999
Q ss_pred hcCCC----CCCCCCCCCC
Q 025099 243 ACPNK----KPEVISTKQD 257 (258)
Q Consensus 243 l~~~~----~~~~l~N~s~ 257 (258)
+.+.+ +.+.+.|||.
T Consensus 156 ~~~~~~~~~~~~~~~n~~i 174 (177)
T TIGR03162 156 LLGLPLEQWWSFDVEYGSI 174 (177)
T ss_pred HhCCCHHHHhccccCCeeE
Confidence 99998 5678999874
No 7
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=9.1e-38 Score=267.55 Aligned_cols=178 Identities=24% Similarity=0.320 Sum_probs=152.0
Q ss_pred ceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcC--CcceE
Q 025099 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCG--GLKVI 156 (258)
Q Consensus 80 ~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~--~~~v~ 156 (258)
|++||||||||+.+|..+.++|+.|.|||+.|++||+.++++|... .+++.|||||+.||+|||+++++..+ ..++.
T Consensus 1 m~~l~LvRHG~t~~n~~~~~qG~~D~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~~TA~~i~~~~~~~~~~~~ 80 (230)
T PRK14117 1 MVKLVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDLAFTSVLKRAIKTTNLALEASDQLWVPVE 80 (230)
T ss_pred CCEEEEEeCccccCcccCCcCCCCCCCcCHHHHHHHHHHHHHHHHcCCCCCEEEECCcHHHHHHHHHHHHhcccCCCCce
Confidence 6899999999999999999999999999999999999999999643 68999999999999999999875332 16788
Q ss_pred ECCCcccccCCCCCCCCHHHHHhhChHH-HHHhhcCCC-----------------------CCCCCCCCCCHHHHHHHHH
Q 025099 157 EDPELRERHLGDLQGLVFREAAKVCPIA-YQAFLSGKT-----------------------DQDIPGGGESLDQLYRRCT 212 (258)
Q Consensus 157 ~~~~L~E~~~g~~~g~~~~~~~~~~p~~-~~~~~~~~~-----------------------~~~~p~~gEs~~~~~~Rv~ 212 (258)
++++|+|+++|.|+|++.+++.+.+|+. +..|..+.. ....+++|||+.++.+|+.
T Consensus 81 ~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv~ 160 (230)
T PRK14117 81 KSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPAMAKDDEYSAHTDRRYASLDDSVIPDAENLKVTLERAL 160 (230)
T ss_pred eCCccccccchhhcCCCHHHHHHHccHHHHHHHhcccccCCCcccccccccccccccccccccCCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999987 445543210 0112348999999999999
Q ss_pred HHHHHHH-HhC-CCCeEEEEechHHHHHHHHHhcCCC----CCCCCCCCCC
Q 025099 213 SALQRIA-RKH-IGERIVVVTHGGVIRTLYQRACPNK----KPEVISTKQD 257 (258)
Q Consensus 213 ~~~~~l~-~~~-~~~~vlIVsHg~~i~~l~~~l~~~~----~~~~l~N~s~ 257 (258)
.+++++. ... .+++|+|||||++|+++++++++.+ +.+.++|||.
T Consensus 161 ~~l~~~~~~~~~~~~~vlvVsHg~~ir~ll~~~lg~~~~~~~~~~~~n~s~ 211 (230)
T PRK14117 161 PFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKGLSDDEIMDVEIPNFPP 211 (230)
T ss_pred HHHHHHHHhhccCCCEEEEEeChHHHHHHHHHHhCcCHHHHhhcCCCCceE
Confidence 9999976 332 4578999999999999999999998 5667999874
No 8
>PRK01295 phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.8e-37 Score=261.61 Aligned_cols=176 Identities=31% Similarity=0.430 Sum_probs=153.7
Q ss_pred ceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcC--CcceE
Q 025099 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCG--GLKVI 156 (258)
Q Consensus 80 ~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~--~~~v~ 156 (258)
.++||||||||+.+|..+.++|+.|.|||+.|++||+.++++|... .+++.|||||+.||+|||++|++.++ ..++.
T Consensus 2 ~~~i~LVRHGet~~n~~~~~~G~~d~~Lt~~G~~qA~~~~~~L~~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~ 81 (206)
T PRK01295 2 SRTLVLVRHGQSEWNLKNLFTGWRDPDLTEQGVAEAKAAGRKLKAAGLKFDIAFTSALSRAQHTCQLILEELGQPGLETI 81 (206)
T ss_pred CceEEEEeCCCCcccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhCCCCCCEEEeCCcHHHHHHHHHHHHHcCCCCCCeE
Confidence 3789999999999999999999999999999999999999999653 67999999999999999999999875 36789
Q ss_pred ECCCcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHHh-CCCCeEEEEechH
Q 025099 157 EDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSAL-QRIARK-HIGERIVVVTHGG 234 (258)
Q Consensus 157 ~~~~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~-~~l~~~-~~~~~vlIVsHg~ 234 (258)
+++.|+|+++|.|+|++.+++.+.+|+.+..++..+.....| +|||+.++.+|+..++ +.+..+ ..+++|||||||+
T Consensus 82 ~~~~L~E~~~G~~eg~~~~e~~~~~~~~~~~~~~~~~~~~~p-~GES~~~~~~Rv~~~~~~~i~~~~~~~~~vliVtHg~ 160 (206)
T PRK01295 82 RDQALNERDYGDLSGLNKDDARAKWGEEQVHIWRRSYDVPPP-GGESLKDTGARVLPYYLQEILPRVLRGERVLVAAHGN 160 (206)
T ss_pred ECCcccccccccccCCcHHHHHHHchHHHHHHhhcccCCCCc-CCCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEcChH
Confidence 999999999999999999999999998766655554445555 9999999999999975 556554 3568999999999
Q ss_pred HHHHHHHHhcCCC----CCCCCCCCC
Q 025099 235 VIRTLYQRACPNK----KPEVISTKQ 256 (258)
Q Consensus 235 ~i~~l~~~l~~~~----~~~~l~N~s 256 (258)
+|+++++++++.+ +.+.+.|++
T Consensus 161 ~ir~l~~~~l~~~~~~~~~~~~~~~~ 186 (206)
T PRK01295 161 SLRALVMVLDGLTPEQILKLELATGV 186 (206)
T ss_pred HHHHHHHHHhCCCHHHHhhcCCCCCC
Confidence 9999999999999 566677664
No 9
>PRK01112 phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.3e-37 Score=266.09 Aligned_cols=176 Identities=24% Similarity=0.367 Sum_probs=154.3
Q ss_pred ceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhhCCccEEEECChHHHHHHHHHHHHHcC--------
Q 025099 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCG-------- 151 (258)
Q Consensus 80 ~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~~~~~~I~sSPl~Ra~qTA~~i~~~l~-------- 151 (258)
|++||||||||+.+|..+.++|+.|.|||+.|++||+.++++|. ..+++.|||||+.||+|||+.+++.++
T Consensus 1 M~~L~LvRHGqt~~n~~~~~~G~~D~~Lte~G~~Qa~~l~~~L~-~~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~~ 79 (228)
T PRK01112 1 MALLILLRHGQSVWNAKNLFTGWVDIPLSQQGIAEAIAAGEKIK-DLPIDCIFTSTLVRSLMTALLAMTNHSSGKIPYIV 79 (228)
T ss_pred CcEEEEEeCCCCccccccccCCCCCCCcCHHHHHHHHHHHHHhh-cCCCCEEEEcCcHHHHHHHHHHHHhhccccccccc
Confidence 68999999999999999999999999999999999999999994 478999999999999999999986321
Q ss_pred --------------------CcceEECCCcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHH
Q 025099 152 --------------------GLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRC 211 (258)
Q Consensus 152 --------------------~~~v~~~~~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv 211 (258)
..++..++.|+|+++|.|+|++.+++.+.+|+.+..++..+....+| +|||+.++..|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~E~~~G~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p-~GES~~d~~~Rv 158 (228)
T PRK01112 80 HEEDDKKWMSRIYSDEEPEQMIPLFQSSALNERMYGELQGKNKAETAEKFGEEQVKLWRRSYKTAPP-QGESLEDTGQRT 158 (228)
T ss_pred ccccccccccccccccccccCCCeeecCccccccccccCCCCHHHHHHHCcHHHHHHHhCcCCCCCC-CCCCHHHHHHHH
Confidence 14678899999999999999999999999998877666655555555 899999999999
Q ss_pred HHHHHHHHHh--CCCCeEEEEechHHHHHHHHHhcCCC----CCCCCCCCCC
Q 025099 212 TSALQRIARK--HIGERIVVVTHGGVIRTLYQRACPNK----KPEVISTKQD 257 (258)
Q Consensus 212 ~~~~~~l~~~--~~~~~vlIVsHg~~i~~l~~~l~~~~----~~~~l~N~s~ 257 (258)
..+++.+..+ ..+++|+|||||++|+++++++++.+ ..+.++|+|.
T Consensus 159 ~~~l~~~~~~~~~~~~~ilVVsHg~vir~l~~~ll~~~~~~~~~~~~~~~~~ 210 (228)
T PRK01112 159 LPYFQNRILPHLQQGKNVFVSAHGNSLRSLIMDLEKLSEEEVLSLELPTGKP 210 (228)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHhhcccCCcce
Confidence 9999986543 25689999999999999999999998 5677888863
No 10
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.9e-37 Score=265.15 Aligned_cols=177 Identities=25% Similarity=0.384 Sum_probs=151.6
Q ss_pred eEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC--cceEE
Q 025099 81 CEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG--LKVIE 157 (258)
Q Consensus 81 ~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~~--~~v~~ 157 (258)
|+||||||||+.+|..+.++|+.|.|||+.|++||+.++++|+.. .+++.|||||+.||+|||++|++..+. .++.+
T Consensus 1 m~l~LvRHG~t~~n~~~~~~G~~d~~Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSpl~Ra~~TA~~i~~~~~~~~~~~~~ 80 (227)
T PRK14118 1 MELVFIRHGFSEWNAKNLFTGWRDVNLTERGVEEAKAAGKKLKEAGYEFDIAFTSVLTRAIKTCNIVLEESNQLWIPQVK 80 (227)
T ss_pred CEEEEEecCCCccccccCcCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEeChHHHHHHHHHHHHhcCCCCCCeec
Confidence 579999999999999999999999999999999999999999653 679999999999999999999886542 56888
Q ss_pred CCCcccccCCCCCCCCHHHHHhhChHH-HHHhhcCCCC-----------------------CCCCCCCCCHHHHHHHHHH
Q 025099 158 DPELRERHLGDLQGLVFREAAKVCPIA-YQAFLSGKTD-----------------------QDIPGGGESLDQLYRRCTS 213 (258)
Q Consensus 158 ~~~L~E~~~g~~~g~~~~~~~~~~p~~-~~~~~~~~~~-----------------------~~~p~~gEs~~~~~~Rv~~ 213 (258)
+++|+|+++|.|+|++.+++.+.+|+. +..|...... ...+++|||+.++.+|+.+
T Consensus 81 ~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv~~ 160 (227)
T PRK14118 81 NWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDTLPPDLDPQDPNSAHNDRRYAHLPADVVPDAENLKVTLERVLP 160 (227)
T ss_pred CCccccccCccccCCcHHHHHHHhhHHHHHHHHhccccCCCccccccccccccchhhccCcCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999986 4445432110 1123489999999999999
Q ss_pred HHHHHHHh--CCCCeEEEEechHHHHHHHHHhcCCC----CCCCCCCCCC
Q 025099 214 ALQRIARK--HIGERIVVVTHGGVIRTLYQRACPNK----KPEVISTKQD 257 (258)
Q Consensus 214 ~~~~l~~~--~~~~~vlIVsHg~~i~~l~~~l~~~~----~~~~l~N~s~ 257 (258)
+++++... +++++|||||||++|+++++++++.+ +.+.++|||.
T Consensus 161 ~l~~~~~~~~~~~~~vlvVsHggvir~ll~~~l~~~~~~~~~~~i~~~s~ 210 (227)
T PRK14118 161 FWEDQIAPALLSGKRVLVAAHGNSLRALAKHIEGISDADIMDLEIPTGQP 210 (227)
T ss_pred HHHHHHhhhhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHhcccCCCCce
Confidence 99997753 35689999999999999999999988 5667888764
No 11
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=100.00 E-value=6.1e-37 Score=258.33 Aligned_cols=176 Identities=40% Similarity=0.577 Sum_probs=163.9
Q ss_pred ceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhh-hCCccEEEECChHHHHHHHHHHHHHcCCcceEEC
Q 025099 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAK-EFKISVIYSSDLKRALETAQTIANRCGGLKVIED 158 (258)
Q Consensus 80 ~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~-~~~~~~I~sSPl~Ra~qTA~~i~~~l~~~~v~~~ 158 (258)
+++||||||||+.+|..+.++|+.|.|||+.|++||+.+++.|.. ...++.||+||+.||+|||+.+++.++ .++..+
T Consensus 2 ~~~i~lvRHGqt~~n~~~~~~G~~d~pLt~~G~~QA~~l~~~l~~~~~~~~~i~sS~l~Ra~~TA~~~a~~~~-~~~~~~ 80 (208)
T COG0406 2 MMRLYLVRHGETEWNVEGRLQGWTDSPLTEEGRAQAEALAERLAARDIGFDAIYSSPLKRAQQTAEPLAEELG-LPLEVD 80 (208)
T ss_pred ceEEEEEecCCccccccccccCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCEEEECchHHHHHHHHHHHHhcC-CCceec
Confidence 689999999999999999999988999999999999999999965 488999999999999999999999998 669999
Q ss_pred CCcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHH
Q 025099 159 PELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRT 238 (258)
Q Consensus 159 ~~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~ 238 (258)
+.|+|+++|.|+|++.+++.+.+|+.+..|..+++....| ++|++.++..|+..+++++...+.+++|+|||||++|++
T Consensus 81 ~~l~E~~~G~~eg~~~~e~~~~~p~~~~~~~~~~~~~~~~-~gEs~~~~~~R~~~~~~~~~~~~~~~~vlvVsHg~~ir~ 159 (208)
T COG0406 81 DRLREIDFGDWEGLTIDELAEEPPEELAAWLADPYLAPPP-GGESLADVSKRVVAALAELLRSPPGNNVLVVSHGGVIRA 159 (208)
T ss_pred CCeeEeecccccCCcHHHHHHhCHHHHHHHhcCccccCCC-CCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEChHHHHH
Confidence 9999999999999999999999999999998888877777 699999999999999999999877668999999999999
Q ss_pred HHHHhcCCC----CCCCCCCCCC
Q 025099 239 LYQRACPNK----KPEVISTKQD 257 (258)
Q Consensus 239 l~~~l~~~~----~~~~l~N~s~ 257 (258)
+++++.+.+ +...++|||.
T Consensus 160 l~~~~~~~~~~~~~~~~~~~~si 182 (208)
T COG0406 160 LLAYLLGLDLEELWRLRLDNASV 182 (208)
T ss_pred HHHHhcCCChhhHHhcCCCCceE
Confidence 999999987 5777888763
No 12
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=9.1e-37 Score=263.80 Aligned_cols=179 Identities=25% Similarity=0.316 Sum_probs=153.5
Q ss_pred CceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcC--Ccce
Q 025099 79 DYCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCG--GLKV 155 (258)
Q Consensus 79 ~~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~--~~~v 155 (258)
.|++||||||||+.+|..+.++|+.|.|||+.|++||+.+++.|... ..++.|||||+.||+|||+++++..+ ..++
T Consensus 3 ~m~~i~LVRHGqt~~n~~~~~~G~~D~pLTe~G~~QA~~~a~~l~~~~~~~~~IysSpl~Ra~qTA~~i~~~~~~~~~~i 82 (249)
T PRK14120 3 MTYTLVLLRHGESEWNAKNLFTGWVDVDLTEKGEAEAKRGGELLAEAGVLPDVVYTSLLRRAIRTANLALDAADRLWIPV 82 (249)
T ss_pred CCcEEEEEeCCCCcccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEecChHHHHHHHHHHHHhcccCCCCe
Confidence 46899999999999999999999999999999999999999999653 57899999999999999999987543 2678
Q ss_pred EECCCcccccCCCCCCCCHHHHHhhChHH-HHHhhcCCCCCC---------------------CCCCCCCHHHHHHHHHH
Q 025099 156 IEDPELRERHLGDLQGLVFREAAKVCPIA-YQAFLSGKTDQD---------------------IPGGGESLDQLYRRCTS 213 (258)
Q Consensus 156 ~~~~~L~E~~~g~~~g~~~~~~~~~~p~~-~~~~~~~~~~~~---------------------~p~~gEs~~~~~~Rv~~ 213 (258)
.+++.|+|++||.|+|++..++.+++|+. +..|........ .+++|||+.++..|+..
T Consensus 83 ~~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~d~~~~~~~~~p~GES~~~~~~Rv~~ 162 (249)
T PRK14120 83 RRSWRLNERHYGALQGKDKAETKAEYGEEQFMLWRRSYDTPPPPIEDGSEYSQDNDPRYADLGVGPRTECLKDVVARFLP 162 (249)
T ss_pred EECCCcccccccccCCCCHHHHHHHccHHHHHHHHhccccCCCccccccccccccCccccccCCCCCCCCHHHHHHHHHH
Confidence 89999999999999999999999999984 777765322111 12489999999999999
Q ss_pred HHHHHH-H-hCCCCeEEEEechHHHHHHHHHhcCCC----CCCCCCCCCC
Q 025099 214 ALQRIA-R-KHIGERIVVVTHGGVIRTLYQRACPNK----KPEVISTKQD 257 (258)
Q Consensus 214 ~~~~l~-~-~~~~~~vlIVsHg~~i~~l~~~l~~~~----~~~~l~N~s~ 257 (258)
+++++. . .+++++|||||||++|+++++++++.+ +.+.++||+.
T Consensus 163 ~l~~~~~~~~~~~~~iliVsHggvir~l~~~~~~~~~~~~~~~~i~~~~~ 212 (249)
T PRK14120 163 YWEDDIVPDLKAGKTVLIAAHGNSLRALVKHLDGISDEDIAGLNIPTGIP 212 (249)
T ss_pred HHHHHHHHHhhCCCEEEEEeCHHHHHHHHHHHhCCCHHHhheeccCCCce
Confidence 999853 3 235678999999999999999999999 5677888874
No 13
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=100.00 E-value=7.5e-37 Score=257.36 Aligned_cols=171 Identities=34% Similarity=0.460 Sum_probs=150.0
Q ss_pred EEEEEccCCCCccccCcccCCC-CCccCHHhHHHHHHHHHHHhhhCCccEEEECChHHHHHHHHHHHHHcCCcceEECCC
Q 025099 82 EIIVVRHGETPWNVQGKIQGHL-DVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPE 160 (258)
Q Consensus 82 ~i~liRHge~~~n~~~~~~g~~-D~pLT~~G~~QA~~l~~~L~~~~~~~~I~sSPl~Ra~qTA~~i~~~l~~~~v~~~~~ 160 (258)
+||||||||+.+|..+.++|+. |.|||+.|++||+.++++| ...+++.|||||+.||+|||+++++.++ .++.++++
T Consensus 1 ~i~lvRHG~t~~n~~~~~~g~~~d~~Lt~~G~~qa~~l~~~l-~~~~~~~i~sSpl~Ra~qTA~~i~~~~~-~~~~~~~~ 78 (204)
T TIGR03848 1 TVILVRHGRSTANTAGTLAGRTPGVDLDERGREQAAALAERL-ADLPIAAIVSSPLERCRETAEPIAEARG-LPPRVDER 78 (204)
T ss_pred CEEEEeCCCCCccccccccCCCCCCCcCHHHHHHHHHHHHHH-hcCCCCEEEeCcHHHHHHHHHHHHHhcC-CCceECcc
Confidence 4899999999999999999998 5999999999999999999 4578999999999999999999999887 78999999
Q ss_pred cccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh-----CCCCeEEEEechHH
Q 025099 161 LRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARK-----HIGERIVVVTHGGV 235 (258)
Q Consensus 161 L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~-----~~~~~vlIVsHg~~ 235 (258)
|+|+++|.|+|++.+++.+. +.|..|...+.....| +|||+.++..|+..+++.+.+. ..+++|||||||++
T Consensus 79 L~E~~~G~~eG~~~~e~~~~--~~~~~~~~~~~~~~~p-~gEs~~~~~~R~~~~l~~~~~~~~~~~~~~~~vliVsHg~~ 155 (204)
T TIGR03848 79 LGECDYGDWTGRELKELAKE--PLWPVVQAHPSAAVFP-GGESLAQVQARAVAAVREHDARLAAEHGPDAVWVACSHGDV 155 (204)
T ss_pred cccCCCCeeCCcCHHHHhCc--HHHHHHhcCcccCCCC-CCCCHHHHHHHHHHHHHHHHHHhhhccCCCCEEEEEeCChH
Confidence 99999999999999998753 3456665555444555 8999999999999999998765 35678999999999
Q ss_pred HHHHHHHhcCCC----CCCCCCCCCC
Q 025099 236 IRTLYQRACPNK----KPEVISTKQD 257 (258)
Q Consensus 236 i~~l~~~l~~~~----~~~~l~N~s~ 257 (258)
|+++++++++.+ +.+.+.|||.
T Consensus 156 ir~ll~~~lg~~~~~~~~~~~~n~si 181 (204)
T TIGR03848 156 IKSVLADALGMHLDLFQRIVVDPCSV 181 (204)
T ss_pred HHHHHHHHhCCCHHHhheeeeCCCeE
Confidence 999999999988 5667889874
No 14
>PRK13462 acid phosphatase; Provisional
Probab=100.00 E-value=1.2e-36 Score=255.90 Aligned_cols=168 Identities=27% Similarity=0.383 Sum_probs=145.9
Q ss_pred CCceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhhCCcc--EEEECChHHHHHHHHHHHHHcCCcce
Q 025099 78 PDYCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKIS--VIYSSDLKRALETAQTIANRCGGLKV 155 (258)
Q Consensus 78 ~~~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~~~~~--~I~sSPl~Ra~qTA~~i~~~l~~~~v 155 (258)
..|++||||||||+.+|..+.++|+.|.|||+.|++||+.+++.|. ..+++ .|||||+.||+|||+.+ .+ ..+
T Consensus 3 ~~~~~i~LvRHG~t~~n~~~~~~G~~d~pLt~~G~~QA~~l~~~l~-~~~~~~~~i~sSpl~Ra~qTA~~i--~~--~~~ 77 (203)
T PRK13462 3 VRNHRLLLLRHGETEWSKSGRHTGRTELELTETGRTQAELAGQALG-ELELDDPLVISSPRRRALDTAKLA--GL--TVD 77 (203)
T ss_pred ccccEEEEEeCCCCCcccCCCccCCCCCCCCHHHHHHHHHHHHHHH-hCCCCCCEEEECchHHHHHHHHHh--cC--ccc
Confidence 4689999999999999999999999999999999999999999994 44455 79999999999999988 22 223
Q ss_pred EECCCcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHH
Q 025099 156 IEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGV 235 (258)
Q Consensus 156 ~~~~~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~ 235 (258)
.++++|+|+++|.|+|++..++.+.+|+ |..|. ...| +|||+.++..|+..+++.+...+++++|+|||||++
T Consensus 78 ~~~~~LrE~~~G~~eG~~~~ei~~~~~~-~~~~~-----~~~p-~gES~~~~~~Rv~~~l~~i~~~~~~~~vliVsHg~v 150 (203)
T PRK13462 78 EVSGLLAEWDYGSYEGLTTPQIRESEPD-WLVWT-----HGCP-GGESVAQVNERADRAVALALEHMESRDVVFVSHGHF 150 (203)
T ss_pred ccCccccccCCccccCCcHHHHHHhCch-HHhhc-----CCCC-CCccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCHH
Confidence 6799999999999999999999998886 33342 2335 899999999999999999988777789999999999
Q ss_pred HHHHHHHhcCCC----CCCCCCCCCC
Q 025099 236 IRTLYQRACPNK----KPEVISTKQD 257 (258)
Q Consensus 236 i~~l~~~l~~~~----~~~~l~N~s~ 257 (258)
|+++++++++.+ +.+.+.|||.
T Consensus 151 ir~ll~~~l~~~~~~~~~~~~~~~s~ 176 (203)
T PRK13462 151 SRAVITRWVELPLAEGSRFAMPTASI 176 (203)
T ss_pred HHHHHHHHhCCCHHHhhhcccCCceE
Confidence 999999999998 4667888874
No 15
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=100.00 E-value=2.3e-36 Score=260.88 Aligned_cols=176 Identities=29% Similarity=0.379 Sum_probs=151.3
Q ss_pred eEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC--cceEE
Q 025099 81 CEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG--LKVIE 157 (258)
Q Consensus 81 ~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~~--~~v~~ 157 (258)
|+||||||||+.+|..+.++|+.|.+||+.|++||+.++++|... ..++.|||||+.||+|||++|++.++. .++..
T Consensus 1 ~~l~lVRHGqt~~n~~~~~~G~~D~~Lt~~G~~QA~~la~~L~~~~~~~d~iysSpl~Ra~qTA~ii~~~~~~~~~~i~~ 80 (245)
T TIGR01258 1 MKLVLVRHGESEWNALNLFTGWVDVKLSEKGQQEAKRAGELLKEEGYEFDVAYTSLLKRAIHTLNIALDELDQLWIPVKK 80 (245)
T ss_pred CEEEEEeCCCcCccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEEcChHHHHHHHHHHHHhcCCCCCCeee
Confidence 579999999999999999999999999999999999999999654 578999999999999999999987752 46788
Q ss_pred CCCcccccCCCCCCCCHHHHHhhChHH-HHHhhcCCCC------------------C------CCCCCCCCHHHHHHHHH
Q 025099 158 DPELRERHLGDLQGLVFREAAKVCPIA-YQAFLSGKTD------------------Q------DIPGGGESLDQLYRRCT 212 (258)
Q Consensus 158 ~~~L~E~~~g~~~g~~~~~~~~~~p~~-~~~~~~~~~~------------------~------~~p~~gEs~~~~~~Rv~ 212 (258)
++.|+|+++|.|+|++.+++.+.+|+. +..|...... + ..| +|||+.++..|+.
T Consensus 81 ~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~d~~y~~~~~~~~p-~GES~~~~~~Rv~ 159 (245)
T TIGR01258 81 SWRLNERHYGALQGLNKAETAAKYGEEQVNIWRRSFDVPPPPIDESDPRSPHNDPRYAHLDPKVLP-LTESLKDTIARVL 159 (245)
T ss_pred CcccccccCCCCcCCCHHHHHHHhhHHHHHHHHhhccCCCCcCCcccccccccChhhhcCCcccCC-CCCCHHHHHHHHH
Confidence 999999999999999999999999986 4445432111 0 134 8999999999999
Q ss_pred HHHHHHHHh--CCCCeEEEEechHHHHHHHHHhcCCC----CCCCCCCCCC
Q 025099 213 SALQRIARK--HIGERIVVVTHGGVIRTLYQRACPNK----KPEVISTKQD 257 (258)
Q Consensus 213 ~~~~~l~~~--~~~~~vlIVsHg~~i~~l~~~l~~~~----~~~~l~N~s~ 257 (258)
.+|+++... .++++|||||||++|+++++++++.+ +.+.+.||+.
T Consensus 160 ~~l~~l~~~~~~~~~~vlvVsHg~vir~l~~~l~~l~~~~~~~~~~~~~~~ 210 (245)
T TIGR01258 160 PYWNDEIAPDLLSGKRVLIVAHGNSLRALVKHLEGISDEEILELNIPTGIP 210 (245)
T ss_pred HHHHHHHhhhhcCCCEEEEEcChHHHHHHHHHHHCcCHHHHhheecCCCce
Confidence 999998754 35678999999999999999999988 4666888764
No 16
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.8e-36 Score=260.67 Aligned_cols=176 Identities=28% Similarity=0.409 Sum_probs=151.9
Q ss_pred eEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC--cceEE
Q 025099 81 CEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG--LKVIE 157 (258)
Q Consensus 81 ~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~~--~~v~~ 157 (258)
|+||||||||+.+|..+.++|+.|.|||+.|++||+.++++|... .+++.|||||+.||+|||++|++.++. .++..
T Consensus 1 ~~i~LVRHGqt~~n~~~~~~G~~D~pLte~G~~QA~~la~~L~~~~~~~d~IysSpl~Ra~qTA~~i~~~~~~~~~~~~~ 80 (247)
T PRK14115 1 TKLVLIRHGESQWNKENRFTGWTDVDLSEKGVSEAKAAGKLLKEEGYTFDVAYTSVLKRAIRTLWIVLDELDQMWLPVEK 80 (247)
T ss_pred CEEEEEECCCcccccccCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEEcCCHHHHHHHHHHHHHcCCCCCCceE
Confidence 579999999999999999999999999999999999999999654 578999999999999999999988763 47889
Q ss_pred CCCcccccCCCCCCCCHHHHHhhChHH-HHHhhcCCC------------------------CCCCCCCCCCHHHHHHHHH
Q 025099 158 DPELRERHLGDLQGLVFREAAKVCPIA-YQAFLSGKT------------------------DQDIPGGGESLDQLYRRCT 212 (258)
Q Consensus 158 ~~~L~E~~~g~~~g~~~~~~~~~~p~~-~~~~~~~~~------------------------~~~~p~~gEs~~~~~~Rv~ 212 (258)
++.|+|++||.|+|++.+++.+.+|+. +..|..... ....| +|||+.++..|+.
T Consensus 81 ~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~GES~~~~~~Rv~ 159 (247)
T PRK14115 81 SWRLNERHYGALQGLNKAETAAKYGDEQVKIWRRSYDVPPPALEKDDERYPGHDPRYAKLPEEELP-LTESLKDTIARVL 159 (247)
T ss_pred CccccccccccccCCCHHHHHHHhhHHHHHHHhcccccCCCcccccccccccccchhhcccCCCCC-CCCcHHHHHHHHH
Confidence 999999999999999999999999886 555544211 01234 8999999999999
Q ss_pred HHHHHHHHh--CCCCeEEEEechHHHHHHHHHhcCCC----CCCCCCCCCC
Q 025099 213 SALQRIARK--HIGERIVVVTHGGVIRTLYQRACPNK----KPEVISTKQD 257 (258)
Q Consensus 213 ~~~~~l~~~--~~~~~vlIVsHg~~i~~l~~~l~~~~----~~~~l~N~s~ 257 (258)
.+++.++.. .++++|||||||++|+++++++++.+ +.+.++||+.
T Consensus 160 ~~l~~~i~~~~~~~~~vlvVtHggvir~l~~~ll~~~~~~~~~~~~~~~~~ 210 (247)
T PRK14115 160 PYWNETIAPQLKSGKRVLIAAHGNSLRALVKYLDNISDEEILELNIPTGVP 210 (247)
T ss_pred HHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCHHHhheeecCCCce
Confidence 999987542 35689999999999999999999998 5667888764
No 17
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=100.00 E-value=2.4e-35 Score=269.34 Aligned_cols=179 Identities=34% Similarity=0.439 Sum_probs=160.7
Q ss_pred CCCCCceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhhCCccEEEECChHHHHHHHHHHHHHcCCcc
Q 025099 75 SVGPDYCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLK 154 (258)
Q Consensus 75 ~~~~~~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~~~~~~I~sSPl~Ra~qTA~~i~~~l~~~~ 154 (258)
.+...+++||||||||+.+|..+.++|+.|.|||+.|++||+.++++|....+++.|||||+.||+|||+.+++.++ .+
T Consensus 166 ~~~~~~~~i~LvRHGet~~n~~~~~~g~~D~~Lt~~G~~QA~~l~~~l~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~-~~ 244 (372)
T PRK07238 166 GARGTPTRLLLLRHGQTELSVQRRYSGRGNPELTEVGRRQAAAAARYLAARGGIDAVVSSPLQRARDTAAAAAKALG-LD 244 (372)
T ss_pred CCCCCceEEEEEeCCCCCcccCCeeeCCCCCCcCHHHHHHHHHHHHHHhccCCCCEEEECChHHHHHHHHHHHHhcC-CC
Confidence 44556899999999999999999999999999999999999999999943238999999999999999999999888 78
Q ss_pred eEECCCcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechH
Q 025099 155 VIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGG 234 (258)
Q Consensus 155 v~~~~~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~ 234 (258)
+.+++.|+|+++|.|+|++.+++.+.+|+.+..|..++ ... |++||++.++..|+..+++++.....+++|+|||||+
T Consensus 245 ~~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~w~~~~-~~~-~p~gEs~~~~~~Rv~~~l~~l~~~~~~~~vlvVtHg~ 322 (372)
T PRK07238 245 VTVDDDLIETDFGAWEGLTFAEAAERDPELHRAWLADT-SVA-PPGGESFDAVARRVRRARDRLIAEYPGATVLVVSHVT 322 (372)
T ss_pred cEECccceeCCCCccCCCCHHHHHHHCHHHHHHHHhCC-CCC-CcCCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEEChH
Confidence 99999999999999999999999999999999998765 333 4489999999999999999998877778999999999
Q ss_pred HHHHHHHHhcCCC----CCCCCCCCC
Q 025099 235 VIRTLYQRACPNK----KPEVISTKQ 256 (258)
Q Consensus 235 ~i~~l~~~l~~~~----~~~~l~N~s 256 (258)
+|+++++++++.+ +.+.+.||+
T Consensus 323 ~ir~ll~~~l~~~~~~~~~~~~~~~~ 348 (372)
T PRK07238 323 PIKTLLRLALDAGPGVLYRLHLDLAS 348 (372)
T ss_pred HHHHHHHHHhCCCHHHhhhcccCCce
Confidence 9999999999988 445677776
No 18
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=100.00 E-value=1.6e-34 Score=231.79 Aligned_cols=156 Identities=41% Similarity=0.684 Sum_probs=141.4
Q ss_pred EEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCCcceEECCC
Q 025099 82 EIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGGLKVIEDPE 160 (258)
Q Consensus 82 ~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~~~~v~~~~~ 160 (258)
+||||||||+.+|..+..+++.|.|||+.|++||+.++++|... ..++.|||||+.||+|||+.+++.++ .++.+++.
T Consensus 1 ~i~liRHg~~~~n~~~~~~~~~d~~Lt~~G~~qA~~~~~~l~~~~~~~~~i~~Sp~~R~~qTA~~~~~~~~-~~~~~~~~ 79 (158)
T PF00300_consen 1 RIYLIRHGESEFNAEGRVQGDSDPPLTERGREQARQLGEYLAERDIQIDVIYSSPLRRCIQTAEIIAEGLG-IEIIVDPR 79 (158)
T ss_dssp EEEEEE-S-BHHHHTTBCGTTSSTGBEHHHHHHHHHHHHHHHHTTSSCSEEEEESSHHHHHHHHHHHHHHT-SEEEEEGG
T ss_pred CEEEEECCccccccCCCcCCCCCccccHHHHHHHHhhcccccccccCceEEecCCcchhhhhhchhhcccc-cccccccc
Confidence 69999999999999998999988899999999999999999533 89999999999999999999999888 89999999
Q ss_pred cccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-hCCCCeEEEEechHHHHHH
Q 025099 161 LRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIAR-KHIGERIVVVTHGGVIRTL 239 (258)
Q Consensus 161 L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~-~~~~~~vlIVsHg~~i~~l 239 (258)
|+|+++|.|+|.+.+++.+.+|..+..|.........| ++|++.++..|+.++++++.. ..++++|||||||++|++|
T Consensus 80 l~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Es~~~~~~R~~~~~~~l~~~~~~~~~vliVsHg~~i~~~ 158 (158)
T PF00300_consen 80 LREIDFGDWEGRPFDEIEEKFPDEFEAWWSDPYFYRPP-GGESWEDFQQRVKQFLDELIAYKRPGENVLIVSHGGFIRAL 158 (158)
T ss_dssp GSCCGCGGGTTSBHHHHHHHHHHHHHHHHHHTSSCGST-TSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEE-HHHHHHH
T ss_pred cccccchhhcccchhhHHhhhhcccchhhccccccccc-cCCCHHHHHHHHHHHHHHHHHHhCCCCEEEEEecHHHHHhC
Confidence 99999999999999999999998888888876666666 899999999999999999996 4578899999999999986
No 19
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-33 Score=235.80 Aligned_cols=169 Identities=34% Similarity=0.464 Sum_probs=151.6
Q ss_pred CceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC--cce
Q 025099 79 DYCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG--LKV 155 (258)
Q Consensus 79 ~~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~~--~~v 155 (258)
..++++||||||+.||.++.++||.|.+||+.|.+||+.++++|... ..++.+|||++.||+|||+.|++..+. +++
T Consensus 4 ~~~~lvlvRHGes~wN~e~~~~G~~D~~Lte~G~~qA~~~~~~l~~~~~~~~~~~tS~l~RakqT~~~il~~~~~~~~pv 83 (214)
T KOG0235|consen 4 NTFRLVLVRHGESEWNKENIFQGWIDAPLTEKGEEQAKAAAQRLKDLNIEFDVCYTSDLKRAKQTAELILEELKQKKVPV 83 (214)
T ss_pred cceEEEEEecCchhhhhhCcccccccCccChhhHHHHHHHHHHHHhcCCcccEEecCHHHHHHHHHHHHHHhhccCCcce
Confidence 35899999999999999999999999999999999999999999666 889999999999999999999998873 789
Q ss_pred EECCCcccccCCCCCCCCHHHHHhhChHH--HHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhC--CCCeEEEEe
Q 025099 156 IEDPELRERHLGDLQGLVFREAAKVCPIA--YQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKH--IGERIVVVT 231 (258)
Q Consensus 156 ~~~~~L~E~~~g~~~g~~~~~~~~~~p~~--~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~--~~~~vlIVs 231 (258)
..+++|+|++||.++|+...++.+++++. +..+.........++.+||..++..|+..+++..+... ++++|+||+
T Consensus 84 ~~~~~L~ER~yG~l~Gl~~~e~~~~~g~~~~~~~~r~~~~~~~~~p~~EsL~~~~~R~~~~~~e~i~~~~~~gk~Vli~a 163 (214)
T KOG0235|consen 84 LYTWRLNERHYGDLQGLNKRETAKRYGEEQVYEDPRLSDLDEIPLPDGESLKDCLDRLLPFWNEEIAKESKEGKNVLIVA 163 (214)
T ss_pred EechhhchhhhccccCccHHHHHHHcchhccccchhhccCCcCCCCCCccHHHHHHHHHHHHHHhhhhhhcCCcEEEEEc
Confidence 99999999999999999999999999987 45554444333444589999999999999999877543 689999999
Q ss_pred chHHHHHHHHHhcCCC
Q 025099 232 HGGVIRTLYQRACPNK 247 (258)
Q Consensus 232 Hg~~i~~l~~~l~~~~ 247 (258)
||+.+|+++.++.|..
T Consensus 164 HGnsLR~i~~~l~g~s 179 (214)
T KOG0235|consen 164 HGNSLRAIVKHLEGIS 179 (214)
T ss_pred CcHHHHHHHHHHhcCC
Confidence 9999999999999987
No 20
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=100.00 E-value=1.3e-32 Score=221.53 Aligned_cols=151 Identities=40% Similarity=0.584 Sum_probs=130.6
Q ss_pred EEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh--CCccEEEECChHHHHHHHHHHHHHcCCcceEECC
Q 025099 82 EIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE--FKISVIYSSDLKRALETAQTIANRCGGLKVIEDP 159 (258)
Q Consensus 82 ~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~--~~~~~I~sSPl~Ra~qTA~~i~~~l~~~~v~~~~ 159 (258)
+|||||||++.+|..+...|..|.|||+.|++||+.++++|... ..++.|||||+.||+|||+++++.++ .+ ..++
T Consensus 1 ~i~lvRHG~s~~n~~~~~~g~~d~~Lt~~G~~qa~~~a~~l~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~-~~-~~~~ 78 (155)
T smart00855 1 RLYLIRHGETEANREGRLTGWTDSPLTELGRAQAEALGELLASLGRLRFDVIYSSPLLRARETAEALAIALG-LG-EVDP 78 (155)
T ss_pred CEEEEeCCCCcccccCeEcCCCCCCCCHHHHHHHHHHHHHHHhccCCCCCEEEeCchHHHHHHHHHHHHhcC-CC-CCCh
Confidence 58999999999998877777789999999999999999999653 68999999999999999999999887 33 4889
Q ss_pred CcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhC--CCCeEEEEechHHHH
Q 025099 160 ELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKH--IGERIVVVTHGGVIR 237 (258)
Q Consensus 160 ~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~--~~~~vlIVsHg~~i~ 237 (258)
.|+|+++|.|+|++.+++...+|+.+..| ..... ++||++.++..|+.++++.+...+ .+++|||||||++|+
T Consensus 79 ~L~E~~~G~~~g~~~~~~~~~~~~~~~~~----~~~~~-~~gEs~~~~~~Rv~~~~~~i~~~~~~~~~~vlvVtHg~~ir 153 (155)
T smart00855 79 RLRERDYGAWEGLTKEEERAKAWTRPADW----LGAAP-PGGESLADVVERLVRALEELIATHDKSGQNVLIVSHGGVIR 153 (155)
T ss_pred hhhhcccceecCCcHHHHHHHHHHHHhcc----CCCCC-cCCCCHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCcccc
Confidence 99999999999999999988877765444 23333 489999999999999999998753 567899999999998
Q ss_pred HH
Q 025099 238 TL 239 (258)
Q Consensus 238 ~l 239 (258)
++
T Consensus 154 ~~ 155 (155)
T smart00855 154 AL 155 (155)
T ss_pred cC
Confidence 64
No 21
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.4e-33 Score=227.10 Aligned_cols=176 Identities=27% Similarity=0.376 Sum_probs=153.6
Q ss_pred ceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC--cceE
Q 025099 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG--LKVI 156 (258)
Q Consensus 80 ~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~~--~~v~ 156 (258)
|++++|+|||||+||..+.++||.|.+||+.|.+||...|+.|++. ..||.+|||-+.||++|+.++.+..+. +++.
T Consensus 1 ~~~Lvl~RHGqSeWN~~NlFtGW~Dv~LtekG~~EA~~ag~llk~~~~~~dia~TS~L~RAi~T~~i~L~e~d~~~ipv~ 80 (230)
T COG0588 1 MMKLVLLRHGQSEWNKENLFTGWVDVDLTEKGISEAKAAGKLLKEEGLEFDIAYTSVLKRAIKTLNIVLEESDQLWIPVI 80 (230)
T ss_pred CceEEEEecCchhhhhcCceeeeeecCcchhhHHHHHHHHHHHHHcCCCcceeehHHHHHHHHHHHHHhhhhcccCcchh
Confidence 5899999999999999999999999999999999999999999766 999999999999999999999998754 6888
Q ss_pred ECCCcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCC------------------------CCCCCHHHHHHHHH
Q 025099 157 EDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIP------------------------GGGESLDQLYRRCT 212 (258)
Q Consensus 157 ~~~~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p------------------------~~gEs~~~~~~Rv~ 212 (258)
..++|+|++||.++|+...+..++|.++....++.......| +..|+..++..|+.
T Consensus 81 kswrLNERhYG~LqGlnK~~t~~kyGeeqv~~wRRsydi~PP~~~~~~~~~~~~d~ry~~~~~~~~p~~EsLkdt~~Rv~ 160 (230)
T COG0588 81 KSWRLNERHYGALQGLNKAETAAKYGEEQVLIWRRSYDIPPPKLEKDDERSPHRDRRYAHLDIGGLPLTESLKDTVERVL 160 (230)
T ss_pred hHHHhhhhhhhhhhcCChHHHHHHHhHHHHHHHHHhcCCCCCCcccccccccccccccccccccCCCccchHHHHHHHhh
Confidence 899999999999999999999999999776655443333322 14599999999999
Q ss_pred HHHHHHHHh--CCCCeEEEEechHHHHHHHHHhcCCC----CCCCCCCC
Q 025099 213 SALQRIARK--HIGERIVVVTHGGVIRTLYQRACPNK----KPEVISTK 255 (258)
Q Consensus 213 ~~~~~l~~~--~~~~~vlIVsHg~~i~~l~~~l~~~~----~~~~l~N~ 255 (258)
.+|+..+.. ..+++|+||+||+.+|+|+.++.+++ ....|+|+
T Consensus 161 Pyw~~~I~p~l~~Gk~VlI~AHGNSlRaLiK~L~~iSd~dI~~l~IPtg 209 (230)
T COG0588 161 PYWEDDIAPNLKSGKNVLIVAHGNSLRALIKYLEGISDEDILDLNIPTG 209 (230)
T ss_pred HHHHHHhhHHHhCCCeEEEEecchhHHHHHHHHhCCCHHHhhhcccCCC
Confidence 999997654 37899999999999999999999998 44445554
No 22
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.98 E-value=7.2e-32 Score=262.35 Aligned_cols=172 Identities=23% Similarity=0.313 Sum_probs=150.0
Q ss_pred ceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh--CCccEEEECChHHHHHHHHHHHHH--------
Q 025099 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE--FKISVIYSSDLKRALETAQTIANR-------- 149 (258)
Q Consensus 80 ~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~--~~~~~I~sSPl~Ra~qTA~~i~~~-------- 149 (258)
.|+|||+||||+.+|..+.++| |.|||+.|++||+.++++|... ..++.|||||+.||+|||+++.+.
T Consensus 419 ~m~i~LiRHGeT~~n~~~r~~G--d~pLt~~G~~qA~~l~~~l~~~~~~~~~~V~sSpl~Ra~~TA~~i~~~~~~~~~~~ 496 (664)
T PTZ00322 419 PMNLYLTRAGEYVDLLSGRIGG--NSRLTERGRAYSRALFEYFQKEISTTSFTVMSSCAKRCTETVHYFAEESILQQSTA 496 (664)
T ss_pred CceEEEEecccchhhhcCccCC--CCccCHHHHHHHHHHHHHHHhccCCCCcEEEcCCcHHHHHHHHHHHhccccccccc
Confidence 4789999999999999999988 8999999999999999999554 346799999999999999999763
Q ss_pred ---------cCCcceEECCCcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHH-HHHHHHHHHHH
Q 025099 150 ---------CGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLY-RRCTSALQRIA 219 (258)
Q Consensus 150 ---------l~~~~v~~~~~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~-~Rv~~~~~~l~ 219 (258)
++ .++..++.|+|+++|.|+|++.+++.+.+|+.|..|..++....+| +|||+.++. .|+..+++++.
T Consensus 497 ~~a~~~~~~~~-~~~~~~~~L~Ei~fG~wEG~t~~ei~~~~p~~~~~~~~d~~~~~~P-~GES~~d~~~~R~~~~i~~l~ 574 (664)
T PTZ00322 497 SAASSQSPSLN-CRVLYFPTLDDINHGDCEGQLLSDVRRTMPNTLQSMKADPYYTAWP-NGECIHQVFNARLEPHIHDIQ 574 (664)
T ss_pred ccccccccccc-ccccchhhhCcCCCcccCCCCHHHHHHhCcHHHHHHHhCCCcCCCC-CCcCHHHHHHHHHHHHHHHHH
Confidence 23 5678899999999999999999999999999999999888777777 899999976 79999999986
Q ss_pred HhCCCCeEEEEechHHHHHHHHHhcCC-----C----CCCCCCCCCC
Q 025099 220 RKHIGERIVVVTHGGVIRTLYQRACPN-----K----KPEVISTKQD 257 (258)
Q Consensus 220 ~~~~~~~vlIVsHg~~i~~l~~~l~~~-----~----~~~~l~N~s~ 257 (258)
.. .++|+|||||++|+++++++++. + +.+.+++++.
T Consensus 575 ~~--~~~ilvVsHg~vir~ll~~~~~~~~~~~~~~~~~~~~i~~~~~ 619 (664)
T PTZ00322 575 AS--TTPVLVVSHLHLLQGLYSYFVTDGDNIVAPQNAYKIDIPFEHV 619 (664)
T ss_pred cc--CCCEEEEeCcHHHHHHHHHHhcCCccccCcccCceeeccCCcE
Confidence 53 36899999999999999999985 2 3445666553
No 23
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=99.97 E-value=2e-30 Score=222.98 Aligned_cols=165 Identities=28% Similarity=0.356 Sum_probs=139.7
Q ss_pred ccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC--cceEECCCcccccCCCC
Q 025099 93 WNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG--LKVIEDPELRERHLGDL 169 (258)
Q Consensus 93 ~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~~--~~v~~~~~L~E~~~g~~ 169 (258)
+|..+.++|+.|.|||+.|++||+.+++.|+.. .+++.|||||+.||+|||+++++.++. .++..+++|+|+++|.|
T Consensus 1 ~N~~~~~qG~~D~pLTe~G~~QA~~l~~~L~~~~~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~L~E~~~G~~ 80 (236)
T PTZ00123 1 WNKENRFTGWTDVPLSEKGVQEAREAGKLLKEKGFRFDVVYTSVLKRAIKTAWIVLEELGQLHVPVIKSWRLNERHYGAL 80 (236)
T ss_pred CcccCceeCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCCCCCCceeCchhhhcccccc
Confidence 577788999999999999999999999999644 689999999999999999999988753 46788999999999999
Q ss_pred CCCCHHHHHhhChHHHHHhhcCCCCCC------------------------CCCCCCCHHHHHHHHHHHHHHHHHh--CC
Q 025099 170 QGLVFREAAKVCPIAYQAFLSGKTDQD------------------------IPGGGESLDQLYRRCTSALQRIARK--HI 223 (258)
Q Consensus 170 ~g~~~~~~~~~~p~~~~~~~~~~~~~~------------------------~p~~gEs~~~~~~Rv~~~~~~l~~~--~~ 223 (258)
+|++.+++.+.+|+.+..++....... .+++|||+.++..|+..+|++++.. .+
T Consensus 81 EG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~li~~~~~~ 160 (236)
T PTZ00123 81 QGLNKSETAEKHGEEQVKIWRRSYDIPPPPLEKSDERYPGNDPVYKDIPKDALPNTECLKDTVERVLPYWEDHIAPDILA 160 (236)
T ss_pred cCCCHHHHHHHccHHHHHHHhcccCCCCCCcccccccccccchhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999987544433221111 1248999999999999999997543 35
Q ss_pred CCeEEEEechHHHHHHHHHhcCCC----CCCCCCCCCC
Q 025099 224 GERIVVVTHGGVIRTLYQRACPNK----KPEVISTKQD 257 (258)
Q Consensus 224 ~~~vlIVsHg~~i~~l~~~l~~~~----~~~~l~N~s~ 257 (258)
+++|||||||++|+++++++++.+ ..+.+.||+.
T Consensus 161 ~~~vliVsHG~vir~ll~~l~~~~~~~~~~~~~~n~~~ 198 (236)
T PTZ00123 161 GKKVLVAAHGNSLRALVKYLDKMSEEDILELNIPTGVP 198 (236)
T ss_pred CCeEEEEeCHHHHHHHHHHHhCCCHHHHhhccCCCCce
Confidence 689999999999999999999988 5677899874
No 24
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.94 E-value=8.2e-26 Score=181.11 Aligned_cols=131 Identities=40% Similarity=0.614 Sum_probs=114.9
Q ss_pred EEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCCcceEECCC
Q 025099 82 EIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGGLKVIEDPE 160 (258)
Q Consensus 82 ~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~~~~v~~~~~ 160 (258)
+|||||||++.++......++.|.|||+.|++||+.++++|... ..++.|||||+.||+|||+.+++.+...++..++.
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~~Sp~~Ra~qTa~~l~~~~~~~~~~~~~~ 80 (153)
T cd07067 1 RLYLVRHGESEWNAEGRFQGWTDVPLTEKGREQARALGKRLKELGIKFDRIYSSPLKRAIQTAEIILEELPGLPVEVDPR 80 (153)
T ss_pred CEEEEECCCCcccccCcccCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECcHHHHHHHHHHHHHhcCCCCceeCcc
Confidence 58999999999988776677889999999999999999999554 48999999999999999999999873367888888
Q ss_pred cccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHH
Q 025099 161 LRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLY 240 (258)
Q Consensus 161 L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l~ 240 (258)
|+| .|+..+++.+...+.+++|+||||+++|+.++
T Consensus 81 L~e---------------------------------------------~R~~~~~~~l~~~~~~~~iliV~H~~~i~~~~ 115 (153)
T cd07067 81 LRE---------------------------------------------ARVLPALEELIAPHDGKNVLIVSHGGVLRALL 115 (153)
T ss_pred chH---------------------------------------------HHHHHHHHHHHHhCCCCeEEEEeChHHHHHHH
Confidence 877 78999999998865678999999999999999
Q ss_pred HHhcCCC----CCCCCCCCCC
Q 025099 241 QRACPNK----KPEVISTKQD 257 (258)
Q Consensus 241 ~~l~~~~----~~~~l~N~s~ 257 (258)
+++.+.+ +.+.++|||.
T Consensus 116 ~~l~~~~~~~~~~~~~~~~s~ 136 (153)
T cd07067 116 AYLLGLSDEDILRLNLPNGSI 136 (153)
T ss_pred HHHhCCCHHHHHhcCCCCceE
Confidence 9999998 3577888874
No 25
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.94 E-value=8.5e-26 Score=200.01 Aligned_cols=150 Identities=31% Similarity=0.364 Sum_probs=115.9
Q ss_pred eEEEEEccCCCCccccCcccCCCCC---ccCHHhHHHHHHHHHHHhhh-------CCccEEEECChHHHHHHHHHHHHHc
Q 025099 81 CEIIVVRHGETPWNVQGKIQGHLDV---ELNEVGREQAVSVAERLAKE-------FKISVIYSSDLKRALETAQTIANRC 150 (258)
Q Consensus 81 ~~i~liRHge~~~n~~~~~~g~~D~---pLT~~G~~QA~~l~~~L~~~-------~~~~~I~sSPl~Ra~qTA~~i~~~l 150 (258)
++||||||||+.++ ++.|. +||+.|++||+.++++|+.. ..++.||+||+.||+|||++|++.+
T Consensus 103 ~~L~LVRHGq~~~~------~~~d~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d~IysSPL~RA~qTAeiIa~~~ 176 (299)
T PTZ00122 103 RQIILVRHGQYINE------SSNDDNIKRLTELGKEQARITGKYLKEQFGEILVDKKVKAIYHSDMTRAKETAEIISEAF 176 (299)
T ss_pred eEEEEEECCCCCCC------CCCCcccCCCCHHHHHHHHHHHHHHHHhhccccccCCCCEEEEcCcHHHHHHHHHHHHhC
Confidence 99999999996543 23344 59999999999999999653 1899999999999999999999987
Q ss_pred CCcceEECCCcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCC---CCeE
Q 025099 151 GGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHI---GERI 227 (258)
Q Consensus 151 ~~~~v~~~~~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~~---~~~v 227 (258)
+..++.++++|+|.. +..+. | ......|+++|+ .+..+|+.++++.+..+.. ++.+
T Consensus 177 ~~~~v~~d~~LrEG~-------~~~~~----~---------~~~~~~~~gee~-~~~~~Rv~~al~~i~~r~~~~~~~~v 235 (299)
T PTZ00122 177 PGVRLIEDPNLAEGV-------PCAPD----P---------PSRGFKPTIEEI-LEDMKRIEAAFEKYFHRPVEDEDSVE 235 (299)
T ss_pred CCCCceeCcccccCC-------ccccC----c---------cccccCCCcchH-HHHHHHHHHHHHHHHHhcccCCCCeE
Confidence 557899999999932 11100 1 001123324454 6679999999999986542 3568
Q ss_pred EEEechHHHHHHHHHhcCCC----CCCCCCCCCC
Q 025099 228 VVVTHGGVIRTLYQRACPNK----KPEVISTKQD 257 (258)
Q Consensus 228 lIVsHg~~i~~l~~~l~~~~----~~~~l~N~s~ 257 (258)
||||||++|+++++++++.| ..+.++|||.
T Consensus 236 LVVsHGgvIR~ll~~lLglp~~~~~~~~~~N~si 269 (299)
T PTZ00122 236 IIVCHGNVIRYLVCRALQLPPEAWLRLSLYNCGI 269 (299)
T ss_pred EEEeCChHHHHHHHHHhCcCHHHHhhccCCCceE
Confidence 99999999999999999998 4667889874
No 26
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.90 E-value=3.5e-23 Score=169.54 Aligned_cols=167 Identities=23% Similarity=0.299 Sum_probs=135.1
Q ss_pred CceEEEEEccCCCCccccCcccC-------CCCCccCHHhHHHHHHHHHHHhhh-C--CccEEEECChHHHHHHHHHHHH
Q 025099 79 DYCEIIVVRHGETPWNVQGKIQG-------HLDVELNEVGREQAVSVAERLAKE-F--KISVIYSSDLKRALETAQTIAN 148 (258)
Q Consensus 79 ~~~~i~liRHge~~~n~~~~~~g-------~~D~pLT~~G~~QA~~l~~~L~~~-~--~~~~I~sSPl~Ra~qTA~~i~~ 148 (258)
..|+||||||||..+|+.+.-.- +.|+-||++|++|+..+++.+.+. . .++.|++|||+||+||+.+.++
T Consensus 13 r~KtiyLvRHgQg~HNV~g~~~h~ay~s~~~fD~~LTplG~~Qv~~l~~~~~A~qL~~~ieliv~SPMrRtLqT~v~~f~ 92 (248)
T KOG4754|consen 13 RCKTIYLVRHGQGIHNVAGEEDHKAYWSEDYFDPHLTPLGWKQVDNLRKHLMAKQLPNKIELIVVSPMRRTLQTMVIAFG 92 (248)
T ss_pred cceEEEEEeccccccccCcccchhhhhhhhccccccCHHHHHHHHHHhhhhhhhhcCCceeEEEechHHHHHHHHHHHhc
Confidence 46999999999999999864322 349999999999999999988554 4 4999999999999999999988
Q ss_pred Hc------CCcceEECCCc----ccc--cCCCCCCCCHHHHHhhChH-HHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHH
Q 025099 149 RC------GGLKVIEDPEL----RER--HLGDLQGLVFREAAKVCPI-AYQAFLSGKTDQDIPGGGESLDQLYRRCTSAL 215 (258)
Q Consensus 149 ~l------~~~~v~~~~~L----~E~--~~g~~~g~~~~~~~~~~p~-~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~ 215 (258)
.. +..++.+.|.+ +|- +..+..+....++.+.||. +|.....+....+.|...|+.++...|-++++
T Consensus 93 ~~~~e~g~~~~p~~vsp~~i~~~rE~lG~hpCD~r~~v~~~~~lfp~~DFs~~~~dv~~~~~pdy~ed~e~~a~r~re~~ 172 (248)
T KOG4754|consen 93 GYLAEDGEDPAPVKVSPPFIAVCRETLGDHPCDRRSSVTDLMKLFPAYDFSLCETDVDPLKKPDYREDDEESAARSREFL 172 (248)
T ss_pred ceeccCCCcCCceeecchHHHHHHHHhCCCcccccchhHHHHhhcccccceeeccCcchhccCcchhhHHHHHHhHHHHH
Confidence 65 22578888888 772 2334457788999999887 56555556555666667899999999999999
Q ss_pred HHHHHhCCCCeEEEEechHHHHHHHHHhcCC
Q 025099 216 QRIARKHIGERIVVVTHGGVIRTLYQRACPN 246 (258)
Q Consensus 216 ~~l~~~~~~~~vlIVsHg~~i~~l~~~l~~~ 246 (258)
+++.++ +.+.|.||+|+++|+.++..+.+-
T Consensus 173 ~~l~~r-~ek~iavvths~fl~~llk~i~k~ 202 (248)
T KOG4754|consen 173 EWLAKR-PEKEIAVVTHSGFLRSLLKKIQKD 202 (248)
T ss_pred HHHHhC-ccceEEEEEehHHHHHHHHHhccc
Confidence 999886 567899999999999888776543
No 27
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.90 E-value=1.2e-22 Score=161.91 Aligned_cols=128 Identities=35% Similarity=0.479 Sum_probs=106.7
Q ss_pred EEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcC-CcceEECC
Q 025099 82 EIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCG-GLKVIEDP 159 (258)
Q Consensus 82 ~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~-~~~v~~~~ 159 (258)
+|+|||||++.++..+...++.|.|||+.|++||+.+++.|... ..++.|||||+.||+|||+.+++.++ ..++..++
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~~d~~Lt~~G~~qa~~l~~~l~~~~~~~~~v~sSp~~R~~~Ta~~~~~~~~~~~~~~~~~ 80 (153)
T cd07040 1 VLYLVRHGEREPNAEGRFTGWGDGPLTEKGRQQARELGKALRERYIKFDRIYSSPLKRAIQTAEIILEGLFEGLPVEVDP 80 (153)
T ss_pred CEEEEeCCCCccccCCCccCCCCCCcCHHHHHHHHHHHHHHHHhCCCCCEEEECChHHHHHHHHHHHHHhcCCCCeEECH
Confidence 48999999999988777678889999999999999999999654 48999999999999999999999872 13333332
Q ss_pred CcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhC--CCCeEEEEechHHHH
Q 025099 160 ELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKH--IGERIVVVTHGGVIR 237 (258)
Q Consensus 160 ~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~--~~~~vlIVsHg~~i~ 237 (258)
. .|+.+++..+.... .+++++||||+++|+
T Consensus 81 ~------------------------------------------------~r~~~~~~~~~~~~~~~~~~iliv~H~~~i~ 112 (153)
T cd07040 81 R------------------------------------------------ARVLNALLELLARHLLDGKNVLIVSHGGTIR 112 (153)
T ss_pred H------------------------------------------------HHHHHHHHHHHHhhCCCCCEEEEEeCCHHHH
Confidence 2 88888888888764 568999999999999
Q ss_pred HHHHHhcCCC----CCCCCCCCCC
Q 025099 238 TLYQRACPNK----KPEVISTKQD 257 (258)
Q Consensus 238 ~l~~~l~~~~----~~~~l~N~s~ 257 (258)
.+++++.+.+ ....++++|.
T Consensus 113 ~~~~~l~~~~~~~~~~~~~~~~~~ 136 (153)
T cd07040 113 ALLAALLGLSDEEILSLNLPNGSI 136 (153)
T ss_pred HHHHHHhCcCHHHhccccCCCCce
Confidence 9999999988 2456777764
No 28
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.85 E-value=2.4e-20 Score=150.04 Aligned_cols=129 Identities=19% Similarity=0.284 Sum_probs=94.2
Q ss_pred eEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC-cceEEC
Q 025099 81 CEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG-LKVIED 158 (258)
Q Consensus 81 ~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~~-~~v~~~ 158 (258)
|+|||||||++.++.. ++.|.|||+.|++||+.++++|... ..++.|||||+.||+|||+.+++.++. ..+...
T Consensus 1 m~l~LvRHg~a~~~~~----~d~dr~Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~~~~~~~~~ 76 (152)
T TIGR00249 1 MQLFIMRHGDAALDAA----SDSVRPLTTNGCDESRLVAQWLKGQGVEIERILVSPFVRAEQTAEIVGDCLNLPSSAEVL 76 (152)
T ss_pred CEEEEEeCCCcccccC----CCCCCCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCcHHHHHHHHHHHHHcCCCcceEEc
Confidence 5899999999988754 5668999999999999999999654 678999999999999999999998762 112222
Q ss_pred CCcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHH
Q 025099 159 PELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRT 238 (258)
Q Consensus 159 ~~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~ 238 (258)
+.|. | +++..+ +.++++.+... ..++|+||+|+..+..
T Consensus 77 ~~l~-----------------------------------p--~~~~~~----~~~~l~~~~~~-~~~~vliVgH~P~i~~ 114 (152)
T TIGR00249 77 EGLT-----------------------------------P--CGDIGL----VSDYLEALTNE-GVASVLLVSHLPLVGY 114 (152)
T ss_pred cCcC-----------------------------------C--CCCHHH----HHHHHHHHHhc-CCCEEEEEeCCCCHHH
Confidence 2111 2 133333 44444444332 4568999999999999
Q ss_pred HHHHhcCCCCCCCCCCC
Q 025099 239 LYQRACPNKKPEVISTK 255 (258)
Q Consensus 239 l~~~l~~~~~~~~l~N~ 255 (258)
++.++.+.+....++.+
T Consensus 115 l~~~l~~~~~~~~~~~~ 131 (152)
T TIGR00249 115 LVAELCPGENPIMFTTG 131 (152)
T ss_pred HHHHHhCCCCCCcCcce
Confidence 99999986432333333
No 29
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.83 E-value=1.6e-19 Score=146.28 Aligned_cols=130 Identities=19% Similarity=0.280 Sum_probs=92.1
Q ss_pred eEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCCc-ceEEC
Q 025099 81 CEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGGL-KVIED 158 (258)
Q Consensus 81 ~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~~~-~v~~~ 158 (258)
|+|||||||++.++.. ++.|.|||+.|++||+.++++|... ..+|.|||||+.||+|||+++++.++.. .+...
T Consensus 1 m~l~lvRHg~a~~~~~----~d~~rpLt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~~~~~~~~~ 76 (159)
T PRK10848 1 MQVFIMRHGDAALDAA----SDSVRPLTTCGCDESRLMANWLKGQKVDIERVLVSPYLRAEQTLEVVGECLNLPASAEVL 76 (159)
T ss_pred CEEEEEeCCCCCCCCC----CCcCCCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCHHHHHHHHHHHHHHhCCCCceEEc
Confidence 5799999999988742 4558899999999999999999654 6789999999999999999999887621 22222
Q ss_pred CCcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHH
Q 025099 159 PELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRT 238 (258)
Q Consensus 159 ~~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~ 238 (258)
+.|.+ + .+. ..+..+++.+.. .+.++|+||+|...+..
T Consensus 77 ~~l~~------------------------------------~-~~~----~~~~~~l~~~~~-~~~~~vllVgH~P~l~~ 114 (159)
T PRK10848 77 PELTP------------------------------------C-GDV----GLVSAYLQALAN-EGVASVLVISHLPLVGY 114 (159)
T ss_pred cCCCC------------------------------------C-CCH----HHHHHHHHHHHh-cCCCeEEEEeCcCcHHH
Confidence 22211 1 111 123334444433 24569999999999999
Q ss_pred HHHHhcCCCCCCCCCCCC
Q 025099 239 LYQRACPNKKPEVISTKQ 256 (258)
Q Consensus 239 l~~~l~~~~~~~~l~N~s 256 (258)
++.++.+......+++|+
T Consensus 115 l~~~L~~~~~~~~~~t~~ 132 (159)
T PRK10848 115 LVAELCPGETPPMFTTSA 132 (159)
T ss_pred HHHHHhCCCCCCCcCCce
Confidence 999998754222244443
No 30
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism]
Probab=99.82 E-value=8.3e-20 Score=165.27 Aligned_cols=160 Identities=29% Similarity=0.407 Sum_probs=141.8
Q ss_pred CceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhhCCcc-EEEECChHHHHHHHHHHHHHcCCcceEE
Q 025099 79 DYCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKIS-VIYSSDLKRALETAQTIANRCGGLKVIE 157 (258)
Q Consensus 79 ~~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~~~~~-~I~sSPl~Ra~qTA~~i~~~l~~~~v~~ 157 (258)
..++|||.||||+++|..++..| |.+|++.|.+-|+.+.+++......+ .|+||++.||+|||+.+... ..+..
T Consensus 238 ~pR~i~l~r~geS~~n~~grigg--ds~ls~~g~~ya~~l~~f~~~~~~~dl~vwts~~~rti~ta~~l~~~---~~~~~ 312 (438)
T KOG0234|consen 238 TPRTIYLTRHGESEFNVEGRIGG--DSPLSERGSQYAKSLIKFVEEQSSSDLDVWTSQRKRTIQTAEGLKLD---YSVEQ 312 (438)
T ss_pred CCceEEEEecCCCccccccccCC--cccccHHHHHHHHHHHHHHhhhcccCceeccchHHHHhhhHhhcCcc---hhhhh
Confidence 45899999999999999988777 99999999999999999996665555 89999999999999943211 11355
Q ss_pred CCCcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHH
Q 025099 158 DPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIR 237 (258)
Q Consensus 158 ~~~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~ 237 (258)
...|+|++.|..+|++.+++...+|+++.....++..+.+| +||++.|+..|+...+=.+..+ .+|+|++|..+|+
T Consensus 313 ~~~Ldei~ag~~~g~t~eeI~~~~p~e~~~r~~dky~yry~-~gESy~D~v~RlePvImElEr~---~~Vlvi~Hqavir 388 (438)
T KOG0234|consen 313 WKALDEIDAGVCEGLTYEEIETNYPEEFALRDKDKYRYRYP-GGESYSDLVQRLEPVIMELERQ---ENVLVITHQAVIR 388 (438)
T ss_pred HhhcCcccccccccccHHHHHHhCchhhhhccCCcceeecC-CCCCHHHHHHhhhhHhHhhhhc---ccEEEEecHHHHH
Confidence 67899999999999999999999999999999999999999 9999999999999999888774 3499999999999
Q ss_pred HHHHHhcCCC
Q 025099 238 TLYQRACPNK 247 (258)
Q Consensus 238 ~l~~~l~~~~ 247 (258)
+++.++++.+
T Consensus 389 cll~Yf~~~~ 398 (438)
T KOG0234|consen 389 CLLAYFLNCS 398 (438)
T ss_pred HHHHHHhcCC
Confidence 9999999988
No 31
>PRK06193 hypothetical protein; Provisional
Probab=99.82 E-value=1.5e-19 Score=151.35 Aligned_cols=129 Identities=22% Similarity=0.157 Sum_probs=101.0
Q ss_pred ceEEEEEccCCCCccccCcccCCC-----CCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCCc
Q 025099 80 YCEIIVVRHGETPWNVQGKIQGHL-----DVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGGL 153 (258)
Q Consensus 80 ~~~i~liRHge~~~n~~~~~~g~~-----D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~~~ 153 (258)
..+||||||||+++|..+...++. |.|||+.|++||+.++++|++. ..+|.|||||+.||+|||++++.... .
T Consensus 42 ~~~L~LvRHGet~~n~~~~~~gd~d~~~~~rpLt~~G~~qA~~l~~~L~~~~~~~d~V~sSpl~Ra~qTA~il~~~~~-~ 120 (206)
T PRK06193 42 GGYVIYFRHAATDRSQADQDTSDMDDCSTQRNLSEEGREQARAIGEAFRALAIPVGKVISSPYCRAWETAQLAFGRHE-K 120 (206)
T ss_pred CCEEEEEeCccCCCCccCCcccccccCcCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhcccc-c
Confidence 489999999999888777666655 5799999999999999999654 68999999999999999999875322 1
Q ss_pred ceEECCCcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEech
Q 025099 154 KVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHG 233 (258)
Q Consensus 154 ~v~~~~~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg 233 (258)
+ +.+++.. ...+ ..|+.+.+..|+.++++.+. .+.++|+||+|+
T Consensus 121 ~----~~l~~~~-----------------------------~~~~-~~~~~~~y~~~l~~~I~~l~--~~~~~vLlVgHn 164 (206)
T PRK06193 121 E----IRLNFLN-----------------------------SEPV-PAERNALLKAGLRPLLTTPP--DPGTNTVLVGHD 164 (206)
T ss_pred C----ccccccc-----------------------------ccCC-ChhhHHHHHHHHHHHHhhCC--CCCCeEEEEeCc
Confidence 0 1111100 0111 35778888899999998886 366789999999
Q ss_pred HHHHHHHHHhcC
Q 025099 234 GVIRTLYQRACP 245 (258)
Q Consensus 234 ~~i~~l~~~l~~ 245 (258)
..|+.++.++.+
T Consensus 165 p~i~~l~g~~~~ 176 (206)
T PRK06193 165 DNLEAATGIYPE 176 (206)
T ss_pred hHHHHHhCCCCc
Confidence 999999998877
No 32
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.82 E-value=1.6e-19 Score=155.09 Aligned_cols=163 Identities=27% Similarity=0.285 Sum_probs=127.0
Q ss_pred ceEEEEEccCCCCccccCc-cc-------C-----------------------CCCCccCHHhHHHHHHHHHHHhhh-CC
Q 025099 80 YCEIIVVRHGETPWNVQGK-IQ-------G-----------------------HLDVELNEVGREQAVSVAERLAKE-FK 127 (258)
Q Consensus 80 ~~~i~liRHge~~~n~~~~-~~-------g-----------------------~~D~pLT~~G~~QA~~l~~~L~~~-~~ 127 (258)
.+.|+++||||+.++.-+. |. | ..|+|||+.|..|++..|+.|... ..
T Consensus 12 ~~~i~vmRHgERvD~if~~~W~~~~~~~~~~y~~~d~n~p~~l~qr~~~~~~y~~d~pit~~g~~~~~~~gr~l~~a~~~ 91 (272)
T KOG3734|consen 12 PRNIFVMRHGERVDNIFGKLWLKTCARPDGKYVPDDMNMPFRLPQRIRSPKGYPIDPPITVSGFIQCKLIGRELLNAGIA 91 (272)
T ss_pred CceEEEEEcccccccccchhhhhhhcCCCCCcCCCCccCCccccccccCcccCccCCCccchhHHHHHHHHHHHHhcCCC
Confidence 4889999999998754322 10 0 128899999999999999999666 89
Q ss_pred ccEEEECChHHHHHHHHHHHHHcCC---cceEECCCcccccCCCC----CC-CCHHHHHhhChH---HHHHhhcCCCCCC
Q 025099 128 ISVIYSSDLKRALETAQTIANRCGG---LKVIEDPELRERHLGDL----QG-LVFREAAKVCPI---AYQAFLSGKTDQD 196 (258)
Q Consensus 128 ~~~I~sSPl~Ra~qTA~~i~~~l~~---~~v~~~~~L~E~~~g~~----~g-~~~~~~~~~~p~---~~~~~~~~~~~~~ 196 (258)
++.||+||..||+|||..+.+.++. ..+.++|+|.|+..-.- +. .+..++....+. .|.... ..
T Consensus 92 i~~ifcSPs~r~VqTa~~i~~~~g~e~~~~i~vePgL~e~~~~~~~~~~p~~is~~el~~~~~~VD~~y~P~~-----~~ 166 (272)
T KOG3734|consen 92 IDVIFCSPSLRCVQTAAKIKKGLGIEKKLKIRVEPGLFEPEKWPKDGKFPFFISPDELKFPGFPVDLNYDPVY-----KE 166 (272)
T ss_pred cceeecCCchhHHHHHHHHHHhhchhcCeeEEecchhcchhhhcccCCCCCcCCHHHHhccCCCcccccchhh-----hh
Confidence 9999999999999999999999884 68999999999854222 22 224444433221 111111 12
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHHHhcCCC
Q 025099 197 IPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQRACPNK 247 (258)
Q Consensus 197 ~p~~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l~~~l~~~~ 247 (258)
.+.++||.+++..|+.+.+..|..+.+++++|||+||..+....+.+.|.+
T Consensus 167 ~~~~~es~e~~~~R~~~~~k~i~~k~~~~~lLIV~H~~sv~~~~~~l~~~~ 217 (272)
T KOG3734|consen 167 TPRWGESLEDCNDRIQKVFKAIADKYPNENLLIVAHGSSVDTCSAQLQGLP 217 (272)
T ss_pred cccccccHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHHhcCCC
Confidence 245789999999999999999999999999999999999999999998865
No 33
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.81 E-value=5.8e-19 Score=146.66 Aligned_cols=122 Identities=18% Similarity=0.226 Sum_probs=90.5
Q ss_pred CceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhhCCccEEEECChHHHHHHHHHHHHHcCCcceEEC
Q 025099 79 DYCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIED 158 (258)
Q Consensus 79 ~~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~~~~~~I~sSPl~Ra~qTA~~i~~~l~~~~v~~~ 158 (258)
..++||||||||+.....+....+ +.|||+.|++||+.++++|++....|.|||||+.||+|||+++++. .++.++
T Consensus 53 ~~~~L~LiRHGet~~~~~~~~~sD-~RpLTerG~~qA~~lg~~L~~~~~~d~I~sSpa~Ra~qTAe~ia~~---~~v~~~ 128 (201)
T PRK15416 53 QHPVVVLFRHAERCDRSDNQCLSD-KTGITVKGTQDARELGKAFSADIPDYDLYSSNTVRTIQSATWFSAG---KKLTVD 128 (201)
T ss_pred CCCEEEEEeCccccCccCCCCCCC-CCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCCHHHHHHHHHHhcC---CCcEec
Confidence 458899999999832211211112 3799999999999999999654444899999999999999999872 456666
Q ss_pred CCcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHH
Q 025099 159 PELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRT 238 (258)
Q Consensus 159 ~~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~ 238 (258)
+.|.|.+ .+..+++..+..+.++++|+||+|+..+..
T Consensus 129 ~~Lye~~-------------------------------------------~~~~~~i~~~i~~~~~~tVLIVGHnp~i~~ 165 (201)
T PRK15416 129 KRLSDCG-------------------------------------------NGIYSAIKDLQRKSPDKNIVIFTHNHCLTY 165 (201)
T ss_pred HHHhhcC-------------------------------------------chhHHHHHHHHHhCCCCEEEEEeCchhHHH
Confidence 6665543 123344555556556689999999999999
Q ss_pred HHHHhcCCC
Q 025099 239 LYQRACPNK 247 (258)
Q Consensus 239 l~~~l~~~~ 247 (258)
+.....+.+
T Consensus 166 La~~~~~~~ 174 (201)
T PRK15416 166 IAKDKRGVK 174 (201)
T ss_pred HHHHhcCCC
Confidence 999877665
No 34
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only]
Probab=99.79 E-value=4.8e-19 Score=145.49 Aligned_cols=150 Identities=28% Similarity=0.287 Sum_probs=112.0
Q ss_pred CceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC-cceE
Q 025099 79 DYCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG-LKVI 156 (258)
Q Consensus 79 ~~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~~-~~v~ 156 (258)
..+.|+||||||... .|+.+ .||++|++||+.+|++|.+. .++|.|+.|.|.||.+||.+|.++++. ....
T Consensus 93 atRhI~LiRHgeY~~------~g~~~-hLTelGReQAE~tGkRL~elglk~d~vv~StM~RA~ETadIIlk~l~d~lk~~ 165 (284)
T KOG4609|consen 93 ATRHIFLIRHGEYHV------DGSLE-HLTELGREQAELTGKRLAELGLKFDKVVASTMVRATETADIILKHLPDDLKRV 165 (284)
T ss_pred hhceEEEEeccceec------cCchh-hcchhhHHHHHHHhHHHHHcCCchhhhhhhhhhhhHHHHHHHHHhCCCcccee
Confidence 458899999999532 22223 89999999999999999777 999999999999999999999999973 5667
Q ss_pred ECCCcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhC-----CCCeEEEEe
Q 025099 157 EDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKH-----IGERIVVVT 231 (258)
Q Consensus 157 ~~~~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~-----~~~~vlIVs 231 (258)
.++.|+|-. .+++.+.. ..| .| -.-.+..-..|+..+|..++.+. ++...+||+
T Consensus 166 s~~ll~EGa--P~ppdPp~----------k~w--------rp-~~~qy~rdgaRIEaafRryfhRA~p~QeedSy~liV~ 224 (284)
T KOG4609|consen 166 SCPLLREGA--PYPPDPPV----------KHW--------RP-LDPQYYRDGARIEAAFRRYFHRASPSQEEDSYELIVC 224 (284)
T ss_pred cccccccCC--CCCCCCCc----------ccC--------Cc-cChHhhhcchHHHHHHHHHHhhcCcccccccEEEEEe
Confidence 788888832 12222211 011 11 11122233478888888876532 345689999
Q ss_pred chHHHHHHHHHhcCCC----CCCCCCCCC
Q 025099 232 HGGVIRTLYQRACPNK----KPEVISTKQ 256 (258)
Q Consensus 232 Hg~~i~~l~~~l~~~~----~~~~l~N~s 256 (258)
|+++|++++|..+..| .++.+.|||
T Consensus 225 HaNVIRY~icRALq~PpegWlR~nlnh~S 253 (284)
T KOG4609|consen 225 HANVIRYFICRALQFPPEGWLRMNLNHCS 253 (284)
T ss_pred ecchhhhhhhhhhcCCcchhheecccCcc
Confidence 9999999999999999 578888887
No 35
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.79 E-value=2.9e-18 Score=137.87 Aligned_cols=122 Identities=26% Similarity=0.364 Sum_probs=91.3
Q ss_pred ceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCCcceEEC
Q 025099 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGGLKVIED 158 (258)
Q Consensus 80 ~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~-~~~~~I~sSPl~Ra~qTA~~i~~~l~~~~v~~~ 158 (258)
||+|||+|||++.+...+ ..+.|.|||+.|++|++.+|++|++. ..+|.|+|||+.||+|||+.+++.++.....+.
T Consensus 1 m~~L~LmRHgkA~~~~~~--~~D~dR~Lt~~G~~ea~~~a~~L~~~~~~~D~VL~Spa~Ra~QTae~v~~~~~~~~~~~~ 78 (163)
T COG2062 1 MMRLYLMRHGKAEWAAPG--IADFDRPLTERGRKEAELVAAWLAGQGVEPDLVLVSPAVRARQTAEIVAEHLGEKKVEVF 78 (163)
T ss_pred CceEEEeecccccccCCC--CCCccCcCCHHHHHHHHHHHHHHHhcCCCCCEEEeChhHHHHHHHHHHHHhhCcccceec
Confidence 689999999999987664 33569999999999999999999777 779999999999999999999999872112211
Q ss_pred CCcccccCCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHH
Q 025099 159 PELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRT 238 (258)
Q Consensus 159 ~~L~E~~~g~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~p~~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~ 238 (258)
+.+ .| ++. . ..+.+.++.+.. ...+++||+|...+..
T Consensus 79 ~~l-----------------------------------~p-~~d-~----~~~l~~l~~~~d--~v~~vllVgH~P~l~~ 115 (163)
T COG2062 79 EEL-----------------------------------LP-NGD-P----GTVLDYLEALGD--GVGSVLLVGHNPLLEE 115 (163)
T ss_pred ccc-----------------------------------CC-CCC-H----HHHHHHHHHhcc--cCceEEEECCCccHHH
Confidence 111 11 111 1 112233333322 3468999999999999
Q ss_pred HHHHhcCC
Q 025099 239 LYQRACPN 246 (258)
Q Consensus 239 l~~~l~~~ 246 (258)
+...+.+.
T Consensus 116 l~~~L~~~ 123 (163)
T COG2062 116 LALLLAGG 123 (163)
T ss_pred HHHHHccc
Confidence 99999986
No 36
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=98.15 E-value=5e-06 Score=71.46 Aligned_cols=60 Identities=28% Similarity=0.292 Sum_probs=50.8
Q ss_pred eEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhh----C-------CccEEEECChHHHHHHHHHHHHH
Q 025099 81 CEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE----F-------KISVIYSSDLKRALETAQTIANR 149 (258)
Q Consensus 81 ~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~----~-------~~~~I~sSPl~Ra~qTA~~i~~~ 149 (258)
+..+++|||++.- ..||+.|++|+..+|+++++. . ..-.|++|+..||+|||+.++.+
T Consensus 4 ~v~~~~RHg~r~p-----------~~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~Sa~~~~~g 72 (242)
T cd07061 4 QVQVLSRHGDRYP-----------GELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQSAQAFLAG 72 (242)
T ss_pred EEEEEEecCCCCc-----------hhhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHHHHHHHHHh
Confidence 5689999999842 479999999999999999654 1 22378999999999999999998
Q ss_pred cC
Q 025099 150 CG 151 (258)
Q Consensus 150 l~ 151 (258)
+-
T Consensus 73 l~ 74 (242)
T cd07061 73 LF 74 (242)
T ss_pred cC
Confidence 74
No 37
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=97.25 E-value=0.00071 Score=60.33 Aligned_cols=46 Identities=22% Similarity=0.273 Sum_probs=39.2
Q ss_pred ccCHHhHHHHHHHHHHHhhh-C---------CccEEEECChHHHHHHHHHHHHHcC
Q 025099 106 ELNEVGREQAVSVAERLAKE-F---------KISVIYSSDLKRALETAQTIANRCG 151 (258)
Q Consensus 106 pLT~~G~~QA~~l~~~L~~~-~---------~~~~I~sSPl~Ra~qTA~~i~~~l~ 151 (258)
.||+.|.+|...+|+++++. . .--.|++|...||++||+.++.++-
T Consensus 62 ~LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl~ 117 (347)
T PF00328_consen 62 QLTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGLY 117 (347)
T ss_dssp SBTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHHS
T ss_pred cccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHHh
Confidence 59999999999999999654 1 2246899999999999999999873
No 38
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism]
Probab=95.67 E-value=0.047 Score=50.83 Aligned_cols=71 Identities=23% Similarity=0.220 Sum_probs=51.1
Q ss_pred ceEEEEEccCCCCc-cc---cCcccC-----CCCCccCHHhHHHHHHHHHHHhh---h-CC-------c--cEEEECChH
Q 025099 80 YCEIIVVRHGETPW-NV---QGKIQG-----HLDVELNEVGREQAVSVAERLAK---E-FK-------I--SVIYSSDLK 137 (258)
Q Consensus 80 ~~~i~liRHge~~~-n~---~~~~~g-----~~D~pLT~~G~~QA~~l~~~L~~---~-~~-------~--~~I~sSPl~ 137 (258)
.+.-++.|||.+.- +. ...+.. ..--.||+.|.+|+.++|++|++ . .+ . -.|.+|+.-
T Consensus 35 efv~~i~RHGdRaP~~~~yp~dp~~~~~~~~~G~GqLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd~n 114 (411)
T KOG3720|consen 35 EFVQVIFRHGDRAPVDTPYPLDPFKEEDFWPRGWGQLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTDVN 114 (411)
T ss_pred EEEEEEeecCCCCcccCCCCCCcccccccCCCCcchhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecCCcc
Confidence 47788899998752 11 111111 01236999999999999999987 3 11 1 257799999
Q ss_pred HHHHHHHHHHHHc
Q 025099 138 RALETAQTIANRC 150 (258)
Q Consensus 138 Ra~qTA~~i~~~l 150 (258)
||+.||+.++.++
T Consensus 115 Rtl~SAqs~laGl 127 (411)
T KOG3720|consen 115 RTLMSAQSVLAGL 127 (411)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999976
No 39
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=95.56 E-value=0.071 Score=49.68 Aligned_cols=70 Identities=16% Similarity=0.127 Sum_probs=49.5
Q ss_pred eEEEEEccCCCCccccC-----c-----ccCCC--CCccCHHhHHHHHHHHHHHhhh------C------C--ccEEEEC
Q 025099 81 CEIIVVRHGETPWNVQG-----K-----IQGHL--DVELNEVGREQAVSVAERLAKE------F------K--ISVIYSS 134 (258)
Q Consensus 81 ~~i~liRHge~~~n~~~-----~-----~~g~~--D~pLT~~G~~QA~~l~~~L~~~------~------~--~~~I~sS 134 (258)
+.++|.|||-+.-.... . +..|. .-.||.+|.++-..+|+++++. . . .-.++++
T Consensus 33 ~vvilsRHg~R~P~~~~~~~l~~~t~~~Wp~w~~~~G~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~a~ 112 (413)
T PRK10173 33 QVLMMSRHNLRAPLANNGSVLEQSTPNAWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAYAN 112 (413)
T ss_pred EEEEEeecccCCCCCCcchhhhhcCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEEeC
Confidence 78999999976532221 1 11121 3359999999999999977432 1 1 2367899
Q ss_pred ChHHHHHHHHHHHHHc
Q 025099 135 DLKRALETAQTIANRC 150 (258)
Q Consensus 135 Pl~Ra~qTA~~i~~~l 150 (258)
+..||++||+.++.++
T Consensus 113 ~~~RT~~Sa~afl~Gl 128 (413)
T PRK10173 113 SLQRTVATAQFFITGA 128 (413)
T ss_pred CchHHHHHHHHHHHhc
Confidence 9999999999988865
No 40
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=95.39 E-value=0.072 Score=49.83 Aligned_cols=70 Identities=14% Similarity=0.058 Sum_probs=48.7
Q ss_pred eEEEEEccCCCCccccC----cc--cCCC-----CCccCHHhHHHHHHHHHHHhhh-CC-----------c--cEEEECC
Q 025099 81 CEIIVVRHGETPWNVQG----KI--QGHL-----DVELNEVGREQAVSVAERLAKE-FK-----------I--SVIYSSD 135 (258)
Q Consensus 81 ~~i~liRHge~~~n~~~----~~--~g~~-----D~pLT~~G~~QA~~l~~~L~~~-~~-----------~--~~I~sSP 135 (258)
+.++|.|||-+.-.... .+ ..|. .-.||++|..|...+|+++++. .. . -.|++++
T Consensus 36 ~Vvil~RHG~RaP~~~~~~~~~~t~~~w~~W~~~~GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~~ 115 (436)
T PRK10172 36 SVVIVSRHGVRAPTKATQLMQDVTPDAWPQWPVKLGWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIADV 115 (436)
T ss_pred EEEEEeeCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeCC
Confidence 66889999987532111 11 1121 2359999999999999988543 11 1 2577888
Q ss_pred hHHHHHHHHHHHHHc
Q 025099 136 LKRALETAQTIANRC 150 (258)
Q Consensus 136 l~Ra~qTA~~i~~~l 150 (258)
..||+.||+.++.++
T Consensus 116 ~~RTi~SAqafl~Gl 130 (436)
T PRK10172 116 DQRTRKTGEAFLAGL 130 (436)
T ss_pred chHHHHHHHHHHHhc
Confidence 899999999988866
No 41
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]
Probab=91.22 E-value=0.33 Score=47.90 Aligned_cols=45 Identities=31% Similarity=0.350 Sum_probs=38.8
Q ss_pred ccCHHhHHHHHHHHHHHhhhCC----------------ccEEEECChHHHHHHHHHHHHHc
Q 025099 106 ELNEVGREQAVSVAERLAKEFK----------------ISVIYSSDLKRALETAQTIANRC 150 (258)
Q Consensus 106 pLT~~G~~QA~~l~~~L~~~~~----------------~~~I~sSPl~Ra~qTA~~i~~~l 150 (258)
.||..|+.||+++|++++.... --.||+|.-.|.+-||+.+++++
T Consensus 511 elT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgL 571 (1018)
T KOG1057|consen 511 ELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGL 571 (1018)
T ss_pred EecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHH
Confidence 4999999999999999965422 23799999999999999999976
No 42
>KOG1382 consensus Multiple inositol polyphosphate phosphatase [General function prediction only]
Probab=85.88 E-value=1.6 Score=40.79 Aligned_cols=47 Identities=23% Similarity=0.228 Sum_probs=38.1
Q ss_pred CccCHHhHHHHHHHHHHHhhh------CCccEEEECChHHHHHHHHHHHHHcC
Q 025099 105 VELNEVGREQAVSVAERLAKE------FKISVIYSSDLKRALETAQTIANRCG 151 (258)
Q Consensus 105 ~pLT~~G~~QA~~l~~~L~~~------~~~~~I~sSPl~Ra~qTA~~i~~~l~ 151 (258)
..|...|+..|.++++.+-+. ...-.|+++-..||.+||+..+.++.
T Consensus 131 ~~l~~~g~~~a~R~~r~f~~~y~~~~n~~~y~i~tt~~~R~~dSA~~F~~GLf 183 (467)
T KOG1382|consen 131 DQLEDEGRMLAKRLARRFPALYYELENPTVYNINTTASQRVVDSAQAFAYGLF 183 (467)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhcCCceEEeeccchHHHHHHHHHHHhhhc
Confidence 357788999999998887543 23346899999999999999999885
No 43
>KOG3672 consensus Histidine acid phosphatase [General function prediction only]
Probab=73.88 E-value=11 Score=34.74 Aligned_cols=43 Identities=12% Similarity=0.204 Sum_probs=33.6
Q ss_pred ccCHHhHHHHHHHHHHHhhh------------CCcc--EEEECChHHHHHHHHHHHH
Q 025099 106 ELNEVGREQAVSVAERLAKE------------FKIS--VIYSSDLKRALETAQTIAN 148 (258)
Q Consensus 106 pLT~~G~~QA~~l~~~L~~~------------~~~~--~I~sSPl~Ra~qTA~~i~~ 148 (258)
.||..|..|-..+|+.+..- ...+ .++|+-+.||.|+|-.+.-
T Consensus 168 ~LT~~G~~QhL~~G~~~r~~Y~k~~lk~~pN~~sv~~lyv~TT~y~RT~QSaLA~lf 224 (487)
T KOG3672|consen 168 MLTAEGALQHLRLGKYFRHRYEKTKLKADPNQRSVADLYVVTTKYNRTVQSALAFLF 224 (487)
T ss_pred ceeHHhHHHHHhhhHHHHHHHhhccccCCccccccceeEEEeccccHHHHHHHHHHH
Confidence 38999999999999988431 1112 5899999999999987754
No 44
>COG2247 LytB Putative cell wall-binding domain [Cell envelope biogenesis, outer membrane]
Probab=63.41 E-value=46 Score=29.97 Aligned_cols=111 Identities=20% Similarity=0.134 Sum_probs=66.7
Q ss_pred cEEEECChHHHHHHHHHHHHHcCCcceEECCCcccccCCCCCCCCHHHHHhhChH-------------HHHHhhcC-CCC
Q 025099 129 SVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPI-------------AYQAFLSG-KTD 194 (258)
Q Consensus 129 ~~I~sSPl~Ra~qTA~~i~~~l~~~~v~~~~~L~E~~~g~~~g~~~~~~~~~~p~-------------~~~~~~~~-~~~ 194 (258)
+.|+.|+-.=-.-+|..+++.++ .++.+.| +|.+..-..+++.+..|+ .|..-..+ ...
T Consensus 30 ~VIlvsDn~aD~~lA~~iaellN-A~Vlttp------wg~ynes~~~eI~~lnpd~VLIIGGp~AVs~~yE~~Lks~Git 102 (337)
T COG2247 30 VVILVSDNEADLLLALPIAELLN-APVLTTP------WGIYNESVLDEIIELNPDLVLIIGGPIAVSPNYENALKSLGIT 102 (337)
T ss_pred EEEEecchHHHHHHhhHHHHHhC-CeeEecC------cccccHHHHHHHHhhCCceEEEECCCCcCChhHHHHHHhCCcE
Confidence 67888988888889999999998 6666665 344443344555555443 23322221 111
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHHHhcCCC
Q 025099 195 QDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQRACPNK 247 (258)
Q Consensus 195 ~~~p~~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l~~~l~~~~ 247 (258)
... -+|.+..+...++..+|.+=.....+...++|.||--...-+..+...+
T Consensus 103 V~R-igG~nR~ETa~~v~~~~~~~yp~af~n~kvvvv~GwDy~~~~~e~~k~~ 154 (337)
T COG2247 103 VKR-IGGANRYETAEKVAKFFREDYPNAFKNVKVVVVYGWDYADALMELMKEG 154 (337)
T ss_pred EEE-ecCcchHHHHHHHHHHHHhhchhhhcCeEEEEEeccccHHHHHHHHhcC
Confidence 111 2788889999999888865333222335677778865553333333333
No 45
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=60.18 E-value=19 Score=35.27 Aligned_cols=40 Identities=25% Similarity=0.305 Sum_probs=31.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHH
Q 025099 200 GGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTL 239 (258)
Q Consensus 200 ~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l 239 (258)
.-|...++..|+++.++.+.+...++.|+||+|+.--..+
T Consensus 188 ~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~ 227 (642)
T PLN02517 188 NTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYF 227 (642)
T ss_pred chhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHH
Confidence 3566788999999999998887677899999998544333
No 46
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=59.97 E-value=8.2 Score=31.73 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEechH
Q 025099 203 SLDQLYRRCTSALQRIARKHIGERIVVVTHGG 234 (258)
Q Consensus 203 s~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~ 234 (258)
+.+++..|+..|++.|.+.+++..||+|+|-.
T Consensus 72 ~~~~~~~~~~~fv~~iR~~hP~tPIllv~~~~ 103 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIREAHPDTPILLVSPIP 103 (178)
T ss_dssp CTTTHHHHHHHHHHHHHTT-SSS-EEEEE---
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 34578899999999999999999999999753
No 47
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=57.27 E-value=19 Score=34.01 Aligned_cols=44 Identities=14% Similarity=0.173 Sum_probs=34.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHHHh
Q 025099 200 GGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQRA 243 (258)
Q Consensus 200 ~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l~~~l 243 (258)
.-|-.++...++++.++...+.++++.|+||+|++-...++..+
T Consensus 157 ~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl 200 (473)
T KOG2369|consen 157 NSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFL 200 (473)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHH
Confidence 35677888999999999988887889999999986554444433
No 48
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=52.71 E-value=34 Score=30.55 Aligned_cols=41 Identities=20% Similarity=0.255 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHHHhcCCC
Q 025099 206 QLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQRACPNK 247 (258)
Q Consensus 206 ~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l~~~l~~~~ 247 (258)
.+..|+...+..+.+ .++++||||+||..-..++.++...+
T Consensus 175 ~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~ 215 (310)
T PF12048_consen 175 RLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKP 215 (310)
T ss_pred HHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCC
Confidence 444555555554444 46778999999999999998888776
No 49
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=41.11 E-value=46 Score=28.18 Aligned_cols=34 Identities=18% Similarity=0.204 Sum_probs=21.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHhC-----CCCeEEEEechH
Q 025099 201 GESLDQLYRRCTSALQRIARKH-----IGERIVVVTHGG 234 (258)
Q Consensus 201 gEs~~~~~~Rv~~~~~~l~~~~-----~~~~vlIVsHg~ 234 (258)
|+...+..+-+.+.++.+.+.. +.+.|+||+|+.
T Consensus 56 g~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSm 94 (225)
T PF07819_consen 56 GRTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSM 94 (225)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEch
Confidence 4455555555555555554433 677899999974
No 50
>PRK00035 hemH ferrochelatase; Reviewed
Probab=40.41 E-value=2.7e+02 Score=24.87 Aligned_cols=19 Identities=32% Similarity=0.385 Sum_probs=13.1
Q ss_pred CCccCHHhHHHHHHHHHHH
Q 025099 104 DVELNEVGREQAVSVAERL 122 (258)
Q Consensus 104 D~pLT~~G~~QA~~l~~~L 122 (258)
.+||...-++|+..+.+.|
T Consensus 69 gSPl~~~t~~q~~~L~~~l 87 (333)
T PRK00035 69 GSPLNVITRRQAEALQAEL 87 (333)
T ss_pred CChhHHHHHHHHHHHHHHH
Confidence 3567777777777777766
No 51
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=40.20 E-value=38 Score=31.27 Aligned_cols=32 Identities=16% Similarity=0.425 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEechHH
Q 025099 203 SLDQLYRRCTSALQRIARKHIGERIVVVTHGGV 235 (258)
Q Consensus 203 s~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~ 235 (258)
...++..++++.++...+.. ++.|+||+|+.-
T Consensus 98 ~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmG 129 (389)
T PF02450_consen 98 ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMG 129 (389)
T ss_pred hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCC
Confidence 45578889999999988776 889999999743
No 52
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=37.94 E-value=69 Score=27.24 Aligned_cols=47 Identities=21% Similarity=0.058 Sum_probs=35.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHHHhcCC
Q 025099 200 GGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQRACPN 246 (258)
Q Consensus 200 ~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l~~~l~~~ 246 (258)
+.++.......+.+++..|.+....++|-|++|++--+.++.-+...
T Consensus 68 d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l 114 (233)
T PF05990_consen 68 DRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQL 114 (233)
T ss_pred hhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHH
Confidence 34566666777888888888766788999999998777776655443
No 53
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=36.64 E-value=72 Score=26.93 Aligned_cols=39 Identities=15% Similarity=0.009 Sum_probs=28.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHH
Q 025099 200 GGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRT 238 (258)
Q Consensus 200 ~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~ 238 (258)
.++....+.++..+++++.+++..++.+|+|+|-.....
T Consensus 140 ~~~~~~~~~~~~l~~l~~~l~~~~~~~~ivvtH~pP~~~ 178 (239)
T TIGR03729 140 RPMSDPERTAIVLKQLKKQLNQLDNKQVIFVTHFVPHRD 178 (239)
T ss_pred CCCChHHHHHHHHHHHHHHHHhcCCCCEEEEEcccchHH
Confidence 345566777777888888776666778999999865443
No 54
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=36.63 E-value=70 Score=28.26 Aligned_cols=26 Identities=23% Similarity=0.484 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEechH
Q 025099 208 YRRCTSALQRIARKHIGERIVVVTHGG 234 (258)
Q Consensus 208 ~~Rv~~~~~~l~~~~~~~~vlIVsHg~ 234 (258)
...++..+.++.++ -+++|++|||..
T Consensus 171 R~~lQ~e~~~lq~~-l~kTivfVTHDi 196 (309)
T COG1125 171 RKQLQEEIKELQKE-LGKTIVFVTHDI 196 (309)
T ss_pred HHHHHHHHHHHHHH-hCCEEEEEecCH
Confidence 34556666666664 578999999984
No 55
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=36.21 E-value=79 Score=23.75 Aligned_cols=39 Identities=26% Similarity=0.376 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEech--HHHHHHHHHhc
Q 025099 206 QLYRRCTSALQRIARKHIGERIVVVTHG--GVIRTLYQRAC 244 (258)
Q Consensus 206 ~~~~Rv~~~~~~l~~~~~~~~vlIVsHg--~~i~~l~~~l~ 244 (258)
.....+.+.+..+.++.++..|+|++|+ +.+..++...+
T Consensus 45 ~~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 4556777788888777777899999996 56666555443
No 56
>PRK02395 hypothetical protein; Provisional
Probab=35.69 E-value=2.7e+02 Score=24.26 Aligned_cols=62 Identities=16% Similarity=0.153 Sum_probs=35.8
Q ss_pred ceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhhCCccEE---E--ECChHHHHHHHHHHHHHcCCcc
Q 025099 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKISVI---Y--SSDLKRALETAQTIANRCGGLK 154 (258)
Q Consensus 80 ~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~~~~~~I---~--sSPl~Ra~qTA~~i~~~l~~~~ 154 (258)
|+.|+|+=||-. ..+.+.+....+++.|++...++.| | +.|..... .+.+....
T Consensus 1 ~~~lllvgHGSr---------------r~~~~~~~~~~la~~l~~~~~~~~v~~~fle~~P~l~~~------l~~l~~~~ 59 (279)
T PRK02395 1 MQALVLVGHGSH---------------LNPDSALPTYAHAETIRARGLFDEVREGFWKEEPSLRQV------LRTVESDE 59 (279)
T ss_pred CceEEEEeCCCC---------------CCcchHHHHHHHHHHHHhcCCCCeEEEeeccCCCCHHHH------HHhcCcCc
Confidence 467889999873 1345677888889888554343333 3 55644321 11122245
Q ss_pred eEECCCcc
Q 025099 155 VIEDPELR 162 (258)
Q Consensus 155 v~~~~~L~ 162 (258)
+.+.|.|-
T Consensus 60 ivVvPlfL 67 (279)
T PRK02395 60 VYVVPLFI 67 (279)
T ss_pred EEEEeeEe
Confidence 66767664
No 57
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=30.84 E-value=88 Score=27.15 Aligned_cols=28 Identities=25% Similarity=0.495 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEechH
Q 025099 205 DQLYRRCTSALQRIARKHIGERIVVVTHGG 234 (258)
Q Consensus 205 ~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~ 234 (258)
..+.+++..-++++.++ +++||+|||..
T Consensus 180 ~~F~~K~~~rl~e~~~~--~~tiv~VSHd~ 207 (249)
T COG1134 180 AAFQEKCLERLNELVEK--NKTIVLVSHDL 207 (249)
T ss_pred HHHHHHHHHHHHHHHHc--CCEEEEEECCH
Confidence 45677888888887664 48999999985
No 58
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=29.96 E-value=1.2e+02 Score=25.91 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=28.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHH
Q 025099 200 GGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQ 241 (258)
Q Consensus 200 ~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l~~ 241 (258)
.|-=-.+-...+.+.+..+.++ .+++||+|||...+.....
T Consensus 170 TgnLD~~t~~~V~~ll~~~~~~-~g~tii~VTHd~~lA~~~d 210 (226)
T COG1136 170 TGNLDSKTAKEVLELLRELNKE-RGKTIIMVTHDPELAKYAD 210 (226)
T ss_pred cccCChHHHHHHHHHHHHHHHh-cCCEEEEEcCCHHHHHhCC
Confidence 3443445667777777777663 4679999999988876543
No 59
>PRK04946 hypothetical protein; Provisional
Probab=27.66 E-value=2.2e+02 Score=23.38 Aligned_cols=45 Identities=11% Similarity=0.020 Sum_probs=34.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEech---HHHHHHHHHhcCC
Q 025099 200 GGESLDQLYRRCTSALQRIARKHIGERIVVVTHG---GVIRTLYQRACPN 246 (258)
Q Consensus 200 ~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg---~~i~~l~~~l~~~ 246 (258)
.|-+.++....+..|++.-.. .+...|.|-|| ++++..+..|+..
T Consensus 101 hG~~~eeA~~~L~~fl~~a~~--~g~r~v~IIHGkG~gvLk~~V~~wL~q 148 (181)
T PRK04946 101 HGLTQLQAKQELGALIAACRK--EHVFCACVMHGHGKHILKQQTPLWLAQ 148 (181)
T ss_pred CCCCHHHHHHHHHHHHHHHHH--cCCCEEEEEcCCCHhHHHHHHHHHHcC
Confidence 467899999999999988666 34445666699 8999888888754
No 60
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=26.50 E-value=1.9e+02 Score=23.99 Aligned_cols=42 Identities=19% Similarity=0.345 Sum_probs=28.7
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEech--HHHHHHHHHhc
Q 025099 203 SLDQLYRRCTSALQRIARKHIGERIVVVTHG--GVIRTLYQRAC 244 (258)
Q Consensus 203 s~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg--~~i~~l~~~l~ 244 (258)
.+..+...+...+..+.++.++..|+|++|+ +.+..++...+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 106 AYKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHH
Confidence 4455566666677777776778899999996 55555554443
No 61
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=25.93 E-value=1e+02 Score=23.79 Aligned_cols=43 Identities=16% Similarity=0.091 Sum_probs=28.3
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEech--HHHHHHHHHhcC
Q 025099 203 SLDQLYRRCTSALQRIARKHIGERIVVVTHG--GVIRTLYQRACP 245 (258)
Q Consensus 203 s~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg--~~i~~l~~~l~~ 245 (258)
.+..+...+...++....+.++..|+|++|+ +.+..++...+.
T Consensus 6 ~~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~ 50 (153)
T cd00741 6 AARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLR 50 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHH
Confidence 3445556666666666665678899999996 555666555443
No 62
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=25.84 E-value=1.6e+02 Score=27.88 Aligned_cols=41 Identities=10% Similarity=0.073 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHHHhc
Q 025099 204 LDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQRAC 244 (258)
Q Consensus 204 ~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l~~~l~ 244 (258)
..+..+++++.++.+.+...++.|.||+|+.---..+.++.
T Consensus 141 ~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 141 LPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHH
Confidence 45667888888888887777788999999855444444443
No 63
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=24.66 E-value=1.2e+02 Score=26.35 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHH
Q 025099 206 QLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLY 240 (258)
Q Consensus 206 ~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l~ 240 (258)
.....+++.+..|.++ .+++|++|||.--=..++
T Consensus 164 lTR~~lq~~l~~lw~~-~~~TvllVTHdi~EAv~L 197 (248)
T COG1116 164 LTREELQDELLRLWEE-TRKTVLLVTHDVDEAVYL 197 (248)
T ss_pred HHHHHHHHHHHHHHHh-hCCEEEEEeCCHHHHHhh
Confidence 3445566677777775 568999999986544333
No 64
>COG1416 Uncharacterized conserved protein [Function unknown]
Probab=23.66 E-value=1.8e+02 Score=21.99 Aligned_cols=40 Identities=23% Similarity=0.248 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHHHhc
Q 025099 205 DQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQRAC 244 (258)
Q Consensus 205 ~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l~~~l~ 244 (258)
.+-...+..-+..+.+..+...|.||.||..+..|..-.-
T Consensus 13 ~~k~~~~l~Nl~Nll~~~p~~~IeVV~~g~ai~~l~~~~~ 52 (112)
T COG1416 13 ESKVNMVLGNLTNLLEDDPSVEIEVVAHGPAIAFLSEKAN 52 (112)
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEeCchhHHhhhhcc
Confidence 3444555555556666567788999999999988876443
No 65
>PLN02847 triacylglycerol lipase
Probab=23.55 E-value=1.7e+02 Score=28.90 Aligned_cols=42 Identities=17% Similarity=0.132 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEech--HHHHHHHHHhcCC
Q 025099 205 DQLYRRCTSALQRIARKHIGERIVVVTHG--GVIRTLYQRACPN 246 (258)
Q Consensus 205 ~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg--~~i~~l~~~l~~~ 246 (258)
..+...+...+..+..++++-.++|++|+ +.+.+++..++..
T Consensus 231 rwI~~~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAilLRe 274 (633)
T PLN02847 231 RWIAKLSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYILRE 274 (633)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHHhc
Confidence 34445555566666667788899999995 7777777777653
No 66
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=23.41 E-value=59 Score=28.83 Aligned_cols=26 Identities=12% Similarity=0.323 Sum_probs=20.3
Q ss_pred EECChHHHHHHHHHHHHHcCCcceEEC
Q 025099 132 YSSDLKRALETAQTIANRCGGLKVIED 158 (258)
Q Consensus 132 ~sSPl~Ra~qTA~~i~~~l~~~~v~~~ 158 (258)
||---.||+|+++...+..+ .++.+.
T Consensus 12 FCaGV~RAI~ive~al~~~g-~pIyv~ 37 (294)
T COG0761 12 FCAGVDRAIQIVERALEEYG-APIYVR 37 (294)
T ss_pred cchhHHHHHHHHHHHHHHcC-CCeEEE
Confidence 45567899999999999988 555543
No 67
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=23.38 E-value=1.2e+02 Score=26.64 Aligned_cols=29 Identities=17% Similarity=0.330 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEechHHH
Q 025099 206 QLYRRCTSALQRIARKHIGERIVVVTHGGVI 236 (258)
Q Consensus 206 ~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i 236 (258)
+...++.+.+..+.+ .+..|++|+||.+-
T Consensus 31 ~~l~~l~~~i~~l~~--~g~~vilVssGAv~ 59 (284)
T cd04256 31 GRLASIVEQVSELQS--QGREVILVTSGAVA 59 (284)
T ss_pred HHHHHHHHHHHHHHH--CCCEEEEEeeCcHH
Confidence 344455555555544 46789999999764
No 68
>COG2344 AT-rich DNA-binding protein [General function prediction only]
Probab=23.12 E-value=1.1e+02 Score=25.55 Aligned_cols=38 Identities=13% Similarity=0.197 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhCCCCeEEEEechHHHHHHHHHhcCCC
Q 025099 210 RCTSALQRIARKHIGERIVVVTHGGVIRTLYQRACPNK 247 (258)
Q Consensus 210 Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l~~~l~~~~ 247 (258)
-+..+|.+++...+..+++||+=|+.-++++.|-+...
T Consensus 70 ~L~~ff~~~Lg~~~~tnviiVG~GnlG~All~Y~f~~~ 107 (211)
T COG2344 70 YLRDFFDDLLGQDKTTNVIIVGVGNLGRALLNYNFSKK 107 (211)
T ss_pred HHHHHHHHHhCCCcceeEEEEccChHHHHHhcCcchhh
Confidence 45677888877667778999999999999998876543
No 69
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=23.09 E-value=87 Score=30.36 Aligned_cols=40 Identities=15% Similarity=0.174 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEech-HHHHHHHHHhcCCC
Q 025099 207 LYRRCTSALQRIARKHIGERIVVVTHG-GVIRTLYQRACPNK 247 (258)
Q Consensus 207 ~~~Rv~~~~~~l~~~~~~~~vlIVsHg-~~i~~l~~~l~~~~ 247 (258)
.-.-...+++.++..+++ .+|||||. .++..+..+....+
T Consensus 184 LD~~~i~WLe~~L~~~~g-tviiVSHDR~FLd~V~t~I~~ld 224 (530)
T COG0488 184 LDLESIEWLEDYLKRYPG-TVIVVSHDRYFLDNVATHILELD 224 (530)
T ss_pred cCHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHhhheEEec
Confidence 334466788888887777 89999998 56666666665554
No 70
>COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism]
Probab=22.90 E-value=1.2e+02 Score=27.09 Aligned_cols=32 Identities=25% Similarity=0.326 Sum_probs=20.6
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEechH
Q 025099 203 SLDQLYRRCTSALQRIARKHIGERIVVVTHGG 234 (258)
Q Consensus 203 s~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~ 234 (258)
+.+....-++...+.|..-.....-+|||||+
T Consensus 20 tae~Q~~~v~~ta~~i~~l~~~g~e~VitHGN 51 (312)
T COG0549 20 TAEAQYEAVKITAEQIADLIASGYEVVITHGN 51 (312)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 56666666666666655433334678999995
No 71
>COG2138 Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism]
Probab=22.87 E-value=82 Score=27.25 Aligned_cols=66 Identities=21% Similarity=0.230 Sum_probs=43.7
Q ss_pred ceEEEEEccCCCCccccCcccCCCCCccCHHhHHHHHHHHHHHhhhCCccEEEEC---ChHHHHHHHHHHHHHcCCcceE
Q 025099 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKISVIYSS---DLKRALETAQTIANRCGGLKVI 156 (258)
Q Consensus 80 ~~~i~liRHge~~~n~~~~~~g~~D~pLT~~G~~QA~~l~~~L~~~~~~~~I~sS---Pl~Ra~qTA~~i~~~l~~~~v~ 156 (258)
|+.++++.||-. .+.|.+++..+++++.....++.+..+ ....+++++--.+...|..++.
T Consensus 2 ~~~~llvgHGsr----------------~p~~~~~~~~~a~~~~~~~~~~~v~~~f~e~~~P~l~~~~~al~~~G~~~iv 65 (245)
T COG2138 2 MPALLLVGHGSR----------------LPRGREVAEAIAARLEERGDFPPVRVAFLELAEPSLREALQALVARGVDRIV 65 (245)
T ss_pred CcceeeeecCCC----------------CccHHHHHHHHHHHHHhhcCCccchhHHHHhcCCCHHHHHHHHHhcCCCeEE
Confidence 678999999985 345688888888877555444444333 3334666666666666656777
Q ss_pred ECCCc
Q 025099 157 EDPEL 161 (258)
Q Consensus 157 ~~~~L 161 (258)
+.|.|
T Consensus 66 vVPlf 70 (245)
T COG2138 66 VVPLF 70 (245)
T ss_pred Eeehh
Confidence 77765
No 72
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=22.69 E-value=1.6e+02 Score=24.24 Aligned_cols=29 Identities=24% Similarity=0.219 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEe
Q 025099 203 SLDQLYRRCTSALQRIARKHIGERIVVVT 231 (258)
Q Consensus 203 s~~~~~~Rv~~~~~~l~~~~~~~~vlIVs 231 (258)
+-+++.+|+++.-+++.+...+++.++|+
T Consensus 13 see~I~~ri~ela~~I~~~y~g~~~~vv~ 41 (178)
T COG0634 13 SEEQIKARIKELAAQITEDYGGKDPLVVG 41 (178)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCceEEEE
Confidence 66889999999999999988878777776
No 73
>PF13479 AAA_24: AAA domain
Probab=22.54 E-value=1.6e+02 Score=24.41 Aligned_cols=35 Identities=11% Similarity=0.339 Sum_probs=27.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHH
Q 025099 200 GGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGV 235 (258)
Q Consensus 200 ~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~ 235 (258)
.+..+.++...+..+++.+... .+.+||+++|...
T Consensus 104 ~~~~yg~~~~~~~~~i~~l~~~-~~~~VI~tah~~~ 138 (213)
T PF13479_consen 104 YGKGYGELQQEFMRFIDKLLNA-LGKNVIFTAHAKE 138 (213)
T ss_pred ccchHHHHHHHHHHHHHHHHHH-CCCcEEEEEEEEE
Confidence 3567788888888999877663 5789999999643
No 74
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=22.16 E-value=2.7e+02 Score=22.07 Aligned_cols=46 Identities=26% Similarity=0.274 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHH-HHHHHHHhcCCC
Q 025099 202 ESLDQLYRRCTSALQRIARKHIGERIVVVTHGGV-IRTLYQRACPNK 247 (258)
Q Consensus 202 Es~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~-i~~l~~~l~~~~ 247 (258)
-|++++.+++.+..+.+........|+-|.-|++ +...+...++.+
T Consensus 10 is~~~i~~~i~~la~~I~~~~~~d~vvgv~~GG~~fa~~L~~~L~~~ 56 (156)
T PRK09177 10 VSWDQLHRDARALAWRLLPAGQWKGIIAVTRGGLVPAAILARELGIR 56 (156)
T ss_pred cCHHHHHHHHHHHHHHHHhhCCCCEEEEEecCCeehHHHHHHHcCCC
Confidence 4778888999988888876433356777777776 777888888876
No 75
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=21.72 E-value=1.1e+02 Score=26.31 Aligned_cols=28 Identities=18% Similarity=0.196 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEechHHHHHH
Q 025099 209 RRCTSALQRIARKHIGERIVVVTHGGVIRTL 239 (258)
Q Consensus 209 ~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l 239 (258)
.++.+.+.++.+ +-+|+||||..--.+=
T Consensus 186 ~kIEeLi~eLk~---~yTIviVTHnmqQAaR 213 (253)
T COG1117 186 LKIEELITELKK---KYTIVIVTHNMQQAAR 213 (253)
T ss_pred HHHHHHHHHHHh---ccEEEEEeCCHHHHHH
Confidence 456666666654 3589999999765443
No 76
>PLN02162 triacylglycerol lipase
Probab=20.44 E-value=2.3e+02 Score=27.06 Aligned_cols=35 Identities=17% Similarity=0.385 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEec--hHHHHHHHH
Q 025099 207 LYRRCTSALQRIARKHIGERIVVVTH--GGVIRTLYQ 241 (258)
Q Consensus 207 ~~~Rv~~~~~~l~~~~~~~~vlIVsH--g~~i~~l~~ 241 (258)
.+..+.+.+..+..++++..++|++| |+.+..+..
T Consensus 260 ay~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaA 296 (475)
T PLN02162 260 AYYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFP 296 (475)
T ss_pred hHHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHH
Confidence 34566777777777778889999999 788877754
No 77
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=20.17 E-value=69 Score=28.11 Aligned_cols=36 Identities=25% Similarity=0.353 Sum_probs=24.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHH
Q 025099 200 GGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIR 237 (258)
Q Consensus 200 ~gEs~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~ 237 (258)
...+.++...++++.++...+. ...|++.+||+.|.
T Consensus 190 ~~~sl~~a~~~~~~i~~aa~~v--~~dii~l~hGGPI~ 225 (268)
T PF09370_consen 190 TALSLEEAAERIQEIFDAARAV--NPDIIVLCHGGPIA 225 (268)
T ss_dssp -S--HHHHHHHHHHHHHHHHCC---TT-EEEEECTTB-
T ss_pred ccCCHHHHHHHHHHHHHHHHHh--CCCeEEEEeCCCCC
Confidence 4678999999999999887653 45689999998764
No 78
>PF10116 Host_attach: Protein required for attachment to host cells; InterPro: IPR019291 Members of this family of bacterial proteins are required for the attachment of the bacterium to host cells [, ].
Probab=20.00 E-value=3.9e+02 Score=20.38 Aligned_cols=42 Identities=17% Similarity=0.228 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHHHhcC
Q 025099 204 LDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQRACP 245 (258)
Q Consensus 204 ~~~~~~Rv~~~~~~l~~~~~~~~vlIVsHg~~i~~l~~~l~~ 245 (258)
.+.+...+.+.++.......-+.++||+.-.++..|...+-+
T Consensus 71 ~~~Fa~~vA~~L~~~~~~~~~~~LvlvA~p~~LG~LR~~L~~ 112 (138)
T PF10116_consen 71 EERFAREVADRLEKARRAGKFDRLVLVAPPRFLGLLREHLSK 112 (138)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHhCH
Confidence 445556666667766666677889999999999888877653
Done!