Your job contains 1 sequence.
>025100
MLRVAARRLLSPSSSSSLRPMASSRNIINGAGSSSSSNDDFRSNGFYGSGYLGPQFQLPC
RGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKF
VLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLR
DPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPY
NLEVPSYSFLDENKMLIG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025100
(258 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2181670 - symbol:AT5G13430 species:3702 "Arabi... 951 1.2e-95 1
TAIR|locus:2181675 - symbol:AT5G13440 species:3702 "Arabi... 950 1.6e-95 1
UNIPROTKB|G4N4E1 - symbol:MGG_16866 "Ubiquinol-cytochrome... 572 1.8e-55 1
SGD|S000000750 - symbol:RIP1 "Ubiquinol-cytochrome-c redu... 551 3.0e-53 1
ASPGD|ASPL0000046895 - symbol:AN2306 species:162425 "Emer... 544 1.7e-52 1
ZFIN|ZDB-GENE-040426-2060 - symbol:uqcrfs1 "ubiquinol-cyt... 536 1.2e-51 1
POMBASE|SPBC16H5.06 - symbol:rip1 "ubiquinol-cytochrome-c... 535 1.5e-51 1
UNIPROTKB|Q5ZLR5 - symbol:UQCRFS1 "Cytochrome b-c1 comple... 528 8.3e-51 1
UNIPROTKB|G3MXD1 - symbol:UQCRFS1 "Ubiquinol-cytochrome c... 525 1.7e-50 1
UNIPROTKB|P13272 - symbol:UQCRFS1 "Cytochrome b-c1 comple... 525 1.7e-50 1
UNIPROTKB|E2R1A6 - symbol:UQCRFS1 "Ubiquinol-cytochrome c... 523 2.8e-50 1
UNIPROTKB|P47985 - symbol:UQCRFS1 "Cytochrome b-c1 comple... 518 9.5e-50 1
UNIPROTKB|F1RNZ1 - symbol:UQCRFS1 "Uncharacterized protei... 518 9.5e-50 1
DICTYBASE|DDB_G0284947 - symbol:ucr "Rieske iron-sulfur p... 517 1.2e-49 1
MGI|MGI:1913944 - symbol:Uqcrfs1 "ubiquinol-cytochrome c ... 517 1.2e-49 1
UNIPROTKB|P0C7P4 - symbol:UQCRFS1P1 "Putative cytochrome ... 514 2.5e-49 1
RGD|628838 - symbol:Uqcrfs1 "ubiquinol-cytochrome c reduc... 514 2.5e-49 1
GENEDB_PFALCIPARUM|PF14_0373 - symbol:PF14_0373 "iron-sul... 489 1.1e-46 1
UNIPROTKB|Q8IL75 - symbol:PF14_0373 "Ubiquinol-cytochrome... 489 1.1e-46 1
TIGR_CMR|APH_0401 - symbol:APH_0401 "ubiquinol-cytochrome... 446 4.0e-42 1
TIGR_CMR|NSE_0624 - symbol:NSE_0624 "ubiquinol-cytochrome... 439 2.2e-41 1
WB|WBGene00002162 - symbol:isp-1 species:6239 "Caenorhabd... 437 3.6e-41 1
TIGR_CMR|SPO_0271 - symbol:SPO_0271 "ubiquinol-cytochrome... 417 4.8e-39 1
TIGR_CMR|ECH_0520 - symbol:ECH_0520 "ubiquinol-cytochrome... 402 1.9e-37 1
TIGR_CMR|CPS_4440 - symbol:CPS_4440 "ubiquinol-cytochrome... 220 3.6e-18 1
FB|FBgn0021906 - symbol:RFeSP "Rieske iron-sulfur protein... 209 5.3e-17 1
TIGR_CMR|CJE_1320 - symbol:CJE_1320 "ubiquinol--cytochrom... 203 2.3e-16 1
TIGR_CMR|SO_0608 - symbol:SO_0608 "ubiquinol-cytochrome c... 199 6.0e-16 1
UNIPROTKB|Q9KUE8 - symbol:VC_0573 "Ubiquinol-cytochrome c... 196 1.3e-15 1
TIGR_CMR|VC_0573 - symbol:VC_0573 "ubiquinol--cytochrome ... 196 1.3e-15 1
TAIR|locus:2005534 - symbol:PETC "photosynthetic electron... 138 6.0e-08 1
TIGR_CMR|GSU_2933 - symbol:GSU_2933 "cytochrome b/b6 comp... 106 9.3e-06 1
TIGR_CMR|BA_0365 - symbol:BA_0365 "Rieske 2Fe-2S iron-sul... 119 0.00010 1
TIGR_CMR|GSU_1650 - symbol:GSU_1650 "cytochrome b/b6 comp... 97 0.00068 1
>TAIR|locus:2181670 [details] [associations]
symbol:AT5G13430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0008121
"ubiquinol-cytochrome-c reductase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016679 "oxidoreductase
activity, acting on diphenols and related substances as donors"
evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA;TAS] [GO:0046872 "metal ion binding" evidence=IDA]
[GO:0005750 "mitochondrial respiratory chain complex III"
evidence=IDA] InterPro:IPR004192 InterPro:IPR005805
InterPro:IPR006317 InterPro:IPR014349 InterPro:IPR017941
Pfam:PF00355 Pfam:PF02921 PRINTS:PR00162 PROSITE:PS51296
EMBL:CP002688 GO:GO:0046872 GO:GO:0022900 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0005750 GO:GO:0008121
PANTHER:PTHR10134 Gene3D:1.20.5.270 TIGRFAMs:TIGR01416 KO:K00411
HSSP:P13272 EMBL:AF375413 EMBL:AY066055 IPI:IPI00535798
RefSeq:NP_568288.1 UniGene:At.28659 ProteinModelPortal:Q94JS0
IntAct:Q94JS0 STRING:Q94JS0 PRIDE:Q94JS0 EnsemblPlants:AT5G13430.1
GeneID:831184 KEGG:ath:AT5G13430 TAIR:At5g13430 InParanoid:Q94JS0
OMA:VPRNQDA PhylomeDB:Q94JS0 ProtClustDB:CLSN2687016
Genevestigator:Q94JS0 Uniprot:Q94JS0
Length = 272
Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
Identities = 172/196 (87%), Positives = 190/196 (96%)
Query: 63 VPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVL 122
VPATV AVK P SKIVYD++NHERYPPGDPSKRAFAYFVL+GGRFVYAS++RLL+LK ++
Sbjct: 77 VPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSGGRFVYASVLRLLVLKLIV 136
Query: 123 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDP 182
SMSASKDVLA+ASLEVDL SIEPG+TVTVKWRGKPVFIRRRTE+DIKLANSVD+GSLRDP
Sbjct: 137 SMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDP 196
Query: 183 QQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNL 242
Q+D+ RVKNPEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHGSHYDISGRIRKGPAPYNL
Sbjct: 197 QEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNL 256
Query: 243 EVPSYSFLDENKMLIG 258
EVP+YSFL+ENK+LIG
Sbjct: 257 EVPTYSFLEENKLLIG 272
>TAIR|locus:2181675 [details] [associations]
symbol:AT5G13440 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0008121
"ubiquinol-cytochrome-c reductase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016679 "oxidoreductase activity,
acting on diphenols and related substances as donors" evidence=IEA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA;TAS]
[GO:0046872 "metal ion binding" evidence=IDA] [GO:0005750
"mitochondrial respiratory chain complex III" evidence=IDA]
InterPro:IPR004192 InterPro:IPR005805 InterPro:IPR006317
InterPro:IPR014349 InterPro:IPR017941 Pfam:PF00355 Pfam:PF02921
PRINTS:PR00162 PROSITE:PS51296 EMBL:CP002688 GO:GO:0046872
GO:GO:0022900 GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022
EMBL:AL163572 GO:GO:0005750 GO:GO:0008121 PANTHER:PTHR10134
Gene3D:1.20.5.270 TIGRFAMs:TIGR01416 KO:K00411 HSSP:P13272
OMA:MIYASAL UniGene:At.28659 ProtClustDB:CLSN2687016 EMBL:AF370533
EMBL:AY081510 IPI:IPI00536150 PIR:T48591 RefSeq:NP_196848.1
UniGene:At.25289 ProteinModelPortal:Q9LYR2 SMR:Q9LYR2
MINT:MINT-4330379 STRING:Q9LYR2 PRIDE:Q9LYR2
EnsemblPlants:AT5G13440.1 GeneID:831185 KEGG:ath:AT5G13440
TAIR:At5g13440 InParanoid:Q9LYR2 PhylomeDB:Q9LYR2
Genevestigator:Q9LYR2 Uniprot:Q9LYR2
Length = 274
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 171/196 (87%), Positives = 190/196 (96%)
Query: 63 VPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVL 122
VPATV AVK P SKIVYD++NHERYPPGDPSKRAFAYFVL+GGRFVYAS++RLL+LK ++
Sbjct: 79 VPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSGGRFVYASVLRLLVLKLIV 138
Query: 123 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDP 182
SMSASKDVLA+ASLEVDL SIEPG+TVTVKWRGKPVFIRRRTE+DIKLANSVD+GSLRDP
Sbjct: 139 SMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDP 198
Query: 183 QQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNL 242
Q+D+ RVKNPEWL+VVGVCTHLGCIPLPNAGD+GGWFCPCHGSHYDISGRIRKGPAPYNL
Sbjct: 199 QEDSVRVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNL 258
Query: 243 EVPSYSFLDENKMLIG 258
EVP+YSFL+ENK+LIG
Sbjct: 259 EVPTYSFLEENKLLIG 274
>UNIPROTKB|G4N4E1 [details] [associations]
symbol:MGG_16866 "Ubiquinol-cytochrome c reductase
iron-sulfur subunit" species:242507 "Magnaporthe oryzae 70-15"
[GO:0043581 "mycelium development" evidence=IEP] InterPro:IPR004192
InterPro:IPR005805 InterPro:IPR006317 InterPro:IPR014349
InterPro:IPR017941 Pfam:PF00355 Pfam:PF02921 PRINTS:PR00162
PROSITE:PS51296 GO:GO:0005739 EMBL:CM001233 GO:GO:0046872
GO:GO:0022900 GO:GO:0070469 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 GO:GO:0043581 GO:GO:0008121 PANTHER:PTHR10134
Gene3D:1.20.5.270 TIGRFAMs:TIGR01416 RefSeq:XP_003712616.1
ProteinModelPortal:G4N4E1 SMR:G4N4E1 EnsemblFungi:MGG_16866T0
GeneID:12985116 KEGG:mgr:MGG_16866 Uniprot:G4N4E1
Length = 236
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 101/172 (58%), Positives = 134/172 (77%)
Query: 88 PPGDPSKRA-FAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPG 146
P G + A F+YF++ + A+ + + +F+++MSAS DVLAMA +EVDL++I G
Sbjct: 65 PKGSSTSNAVFSYFMVGAMGAISAAGAKSTVQEFLVNMSASADVLAMAKVEVDLTTIPEG 124
Query: 147 STVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGC 206
V +KWRGKPVFIR RT +I AN +D+ SLRDP+ D++RVK PEWLV++GVCTHLGC
Sbjct: 125 KNVIIKWRGKPVFIRHRTGREIDEANKIDVASLRDPEADSDRVKKPEWLVMLGVCTHLGC 184
Query: 207 IPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
+P+ AGDFGGWFCPCHGSHYDISGRIRKGPAP NLE+P+Y F +++K++IG
Sbjct: 185 VPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYDFPEDDKLVIG 236
>SGD|S000000750 [details] [associations]
symbol:RIP1 "Ubiquinol-cytochrome-c reductase, a Rieske
iron-sulfur protein of the" species:4932 "Saccharomyces cerevisiae"
[GO:0008121 "ubiquinol-cytochrome-c reductase activity"
evidence=IEA;IDA] [GO:0005750 "mitochondrial respiratory chain
complex III" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016679
"oxidoreductase activity, acting on diphenols and related
substances as donors" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA;IPI] [GO:0022900 "electron transport chain"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0070469
"respiratory chain" evidence=IEA] [GO:0009060 "aerobic respiration"
evidence=IMP] [GO:0006122 "mitochondrial electron transport,
ubiquinol to cytochrome c" evidence=IDA] InterPro:IPR004192
InterPro:IPR005805 InterPro:IPR006317 InterPro:IPR014349
InterPro:IPR017941 Pfam:PF00355 Pfam:PF02921 PRINTS:PR00162
PROSITE:PS51296 SGD:S000000750 GO:GO:0046872 EMBL:BK006939
GO:GO:0051537 GO:GO:0009060 Gene3D:2.102.10.10 SUPFAM:SSF50022
EMBL:U18530 GO:GO:0005750 GO:GO:0006122 PDB:1EZV PDB:1KB9 PDB:1KYO
PDB:1P84 PDB:2IBZ PDB:3CX5 PDB:3CXH PDBsum:1EZV PDBsum:1KB9
PDBsum:1KYO PDBsum:1P84 PDBsum:2IBZ PDBsum:3CX5 PDBsum:3CXH
GO:GO:0008121 KO:K01591 RefSeq:NP_010893.3 GeneID:856692
KEGG:sce:YEL021W eggNOG:COG0723 PANTHER:PTHR10134
HOGENOM:HOG000255193 Gene3D:1.20.5.270 TIGRFAMs:TIGR01416 KO:K00411
GeneTree:ENSGT00390000001014 OrthoDB:EOG46T69W EMBL:M23316
EMBL:M24500 EMBL:AY558341 PIR:A29318 RefSeq:NP_010890.3
ProteinModelPortal:P08067 SMR:P08067 DIP:DIP-6616N IntAct:P08067
MINT:MINT-696377 STRING:P08067 PaxDb:P08067 PeptideAtlas:P08067
EnsemblFungi:YEL024W GeneID:856689 KEGG:sce:YEL024W CYGD:YEL024w
OMA:PHQYIDD EvolutionaryTrace:P08067 NextBio:982730
Genevestigator:P08067 GermOnline:YEL024W Uniprot:P08067
Length = 215
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 97/169 (57%), Positives = 134/169 (79%)
Query: 91 DPSK-RAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTV 149
D K R++AYF++ + ++ + + F+ SM+A+ DVLAMA +EV+L++I G V
Sbjct: 48 DADKGRSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNV 107
Query: 150 TVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPL 209
VKW+GKPVFIR RT +I+ ANSVD+ +L+DPQ DA+RVK+P+WL+++G+CTHLGC+P+
Sbjct: 108 VVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVPI 167
Query: 210 PNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
AGDFGGWFCPCHGSHYDISGRIRKGPAP NLE+P+Y F D +K+++G
Sbjct: 168 GEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEF-DGDKVIVG 215
>ASPGD|ASPL0000046895 [details] [associations]
symbol:AN2306 species:162425 "Emericella nidulans"
[GO:0006091 "generation of precursor metabolites and energy"
evidence=RCA] [GO:0008121 "ubiquinol-cytochrome-c reductase
activity" evidence=IEA;RCA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IEA] [GO:0005750 "mitochondrial respiratory chain complex
III" evidence=IEA] [GO:0009060 "aerobic respiration" evidence=IEA]
[GO:0006122 "mitochondrial electron transport, ubiquinol to
cytochrome c" evidence=IEA] InterPro:IPR004192 InterPro:IPR005805
InterPro:IPR006317 InterPro:IPR014349 InterPro:IPR017941
Pfam:PF00355 Pfam:PF02921 PRINTS:PR00162 PROSITE:PS51296
GO:GO:0005739 GO:GO:0046872 EMBL:BN001307 GO:GO:0022900
GO:GO:0070469 GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022
GO:GO:0008121 PANTHER:PTHR10134 Gene3D:1.20.5.270
TIGRFAMs:TIGR01416 OMA:PHQYIDD EnsemblFungi:CADANIAT00008999
Uniprot:C8VN54
Length = 228
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 101/182 (55%), Positives = 132/182 (72%)
Query: 79 YDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLI--RLLILKFVLSMSASKDVLAMASL 136
+ +Y+ ++ P S + F+YFV G AS + + + F+++MSAS DVLA A +
Sbjct: 52 FSKYSSKKAPR---SNQVFSYFV--AGTMGLASAVGAKATVQDFLVNMSASADVLAQAKV 106
Query: 137 EVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLV 196
E+ L++I G V +KWRGKPVFIR RT+++IK A D +LRDPQ D ERV+ EWLV
Sbjct: 107 EIGLATIPEGKNVIIKWRGKPVFIRHRTQDEIKEAQEYDWKTLRDPQPDEERVQKAEWLV 166
Query: 197 VVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKML 256
++GVCTHLGC+P+ +GDFGGWFCPCHGSHYDISGRIRKGPAP NLEVP Y+F DE ++
Sbjct: 167 MLGVCTHLGCVPIGESGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPQYNFPDEETLI 226
Query: 257 IG 258
IG
Sbjct: 227 IG 228
>ZFIN|ZDB-GENE-040426-2060 [details] [associations]
symbol:uqcrfs1 "ubiquinol-cytochrome c reductase,
Rieske iron-sulfur polypeptide 1" species:7955 "Danio rerio"
[GO:0016679 "oxidoreductase activity, acting on diphenols and
related substances as donors" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008121
"ubiquinol-cytochrome-c reductase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0070469
"respiratory chain" evidence=IEA] [GO:0022900 "electron transport
chain" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] InterPro:IPR004192
InterPro:IPR005805 InterPro:IPR006317 InterPro:IPR014349
InterPro:IPR015248 InterPro:IPR017941 Pfam:PF00355 Pfam:PF02921
Pfam:PF09165 PRINTS:PR00162 PROSITE:PS51296
ZFIN:ZDB-GENE-040426-2060 GO:GO:0005739 GO:GO:0046872 GO:GO:0022900
GO:GO:0070469 GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022
GO:GO:0008121 eggNOG:COG0723 PANTHER:PTHR10134 HOVERGEN:HBG001040
Gene3D:1.20.5.270 InterPro:IPR011070 SUPFAM:SSF56568
TIGRFAMs:TIGR01416 EMBL:BC059475 IPI:IPI00491457 UniGene:Dr.76290
ProteinModelPortal:Q6PC48 SMR:Q6PC48 STRING:Q6PC48 PRIDE:Q6PC48
InParanoid:Q6PC48 ArrayExpress:Q6PC48 Bgee:Q6PC48 Uniprot:Q6PC48
Length = 273
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 95/177 (53%), Positives = 131/177 (74%)
Query: 83 NHERYPPGDPSKRAFAYFVLTGGRFVYASLI-RLLILKFVLSMSASKDVLAMASLEVDLS 141
N + GD ++RAF+Y ++TG V + ++ +FV SMSAS DVLA++ +E+ L+
Sbjct: 99 NKQSQESGD-ARRAFSY-LMTGSTLVVGVYTAKTVVTQFVSSMSASADVLALSKIEIKLA 156
Query: 142 SIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVC 201
I G +T KWRGKP+F+R RTE++I+ V+L LRDPQ D +RV NP W++V+GVC
Sbjct: 157 DIPEGKNMTFKWRGKPLFVRHRTEKEIETEAGVNLAELRDPQHDKDRVVNPSWVIVIGVC 216
Query: 202 THLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
THLGC+P+ NAG+FGG++CPCHGSHYD SGRIRKGPAP NLEVP Y F D++ +++G
Sbjct: 217 THLGCVPIANAGEFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPYYEFPDDDTVVVG 273
>POMBASE|SPBC16H5.06 [details] [associations]
symbol:rip1 "ubiquinol-cytochrome-c reductase complex
subunit 5" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IGI] [GO:0005750 "mitochondrial respiratory
chain complex III" evidence=IGI] [GO:0006122 "mitochondrial
electron transport, ubiquinol to cytochrome c" evidence=IGI]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=IEA] [GO:0008121 "ubiquinol-cytochrome-c
reductase activity" evidence=IGI] InterPro:IPR004192
InterPro:IPR005805 InterPro:IPR006317 InterPro:IPR014349
InterPro:IPR017941 Pfam:PF00355 Pfam:PF02921 PRINTS:PR00162
PROSITE:PS51296 PomBase:SPBC16H5.06 GO:GO:0016021 GO:GO:0046872
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0005750 GO:GO:0006122
GO:GO:0008121 eggNOG:COG0723 PANTHER:PTHR10134 HOGENOM:HOG000255193
Gene3D:1.20.5.270 TIGRFAMs:TIGR01416 KO:K00411 EMBL:U40480
PIR:T39619 RefSeq:NP_595941.1 ProteinModelPortal:Q09154 SMR:Q09154
STRING:Q09154 PRIDE:Q09154 EnsemblFungi:SPBC16H5.06.1
GeneID:2540075 KEGG:spo:SPBC16H5.06 OMA:WSASADV OrthoDB:EOG46T69W
NextBio:20801212 Uniprot:Q09154
Length = 228
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 102/181 (56%), Positives = 133/181 (73%)
Query: 79 YDEYNHERYPPGDPSKRAFAYFVL-TGGRFVYASLIRLLILKFVLSMSASKDVLAMASLE 137
+ EY + GD S R +Y ++ T G A + + F+ S SAS DVLAM+ E
Sbjct: 53 FSEYQTKS--TGDRS-RVISYAMVGTMGALTAAGA-QATVHDFLASWSASADVLAMSKAE 108
Query: 138 VDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVV 197
VDLS I G + VKW+GKPVFIR RT E+I+ ANSVD+ +LRDPQ D++RV+ PEWLV+
Sbjct: 109 VDLSKIPEGKNLVVKWQGKPVFIRHRTPEEIQEANSVDISTLRDPQADSDRVQKPEWLVM 168
Query: 198 VGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLI 257
+GVCTHLGC+P+ AGD+GGWFCPCHGSHYDISGRIR+GPAP NL +P+Y+F + +K++I
Sbjct: 169 IGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRRGPAPLNLAIPAYTF-EGSKIII 227
Query: 258 G 258
G
Sbjct: 228 G 228
>UNIPROTKB|Q5ZLR5 [details] [associations]
symbol:UQCRFS1 "Cytochrome b-c1 complex subunit Rieske,
mitochondrial" species:9031 "Gallus gallus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0022900 "electron transport chain"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0070469 "respiratory chain" evidence=IEA] [GO:0008121
"ubiquinol-cytochrome-c reductase activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR004192 InterPro:IPR005805 InterPro:IPR006317
InterPro:IPR014349 InterPro:IPR015248 InterPro:IPR017941
Pfam:PF00355 Pfam:PF02921 Pfam:PF09165 PRINTS:PR00162
PROSITE:PS51296 GO:GO:0016021 GO:GO:0005743 GO:GO:0046872
GO:GO:0022900 GO:GO:0070469 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 GO:GO:0008121 PDB:3CWB PDB:3H1H PDB:3H1I PDB:3H1J
PDB:3H1K PDB:3H1L PDB:3L70 PDB:3L71 PDB:3L72 PDB:3L73 PDB:3L74
PDB:3L75 PDB:3TGU PDBsum:3CWB PDBsum:3H1H PDBsum:3H1I PDBsum:3H1J
PDBsum:3H1K PDBsum:3H1L PDBsum:3L70 PDBsum:3L71 PDBsum:3L72
PDBsum:3L73 PDBsum:3L74 PDBsum:3L75 PDBsum:3TGU eggNOG:COG0723
PANTHER:PTHR10134 HOGENOM:HOG000255193 HOVERGEN:HBG001040
OrthoDB:EOG4VMFG4 Gene3D:1.20.5.270 InterPro:IPR011070
SUPFAM:SSF56568 TIGRFAMs:TIGR01416 CTD:7386 KO:K00411 EMBL:AJ719669
IPI:IPI00571043 RefSeq:NP_001005843.1 UniGene:Gga.5791
ProteinModelPortal:Q5ZLR5 SMR:Q5ZLR5 STRING:Q5ZLR5 PRIDE:Q5ZLR5
Ensembl:ENSGALT00000007087 GeneID:415752 KEGG:gga:415752
GeneTree:ENSGT00390000001014 InParanoid:Q5ZLR5 OMA:DYRRAEV
EvolutionaryTrace:Q5ZLR5 NextBio:20819306 Uniprot:Q5ZLR5
Length = 272
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 96/202 (47%), Positives = 133/202 (65%)
Query: 64 PATVAAVKNPTSKIVYDEYNHERYPPGDPS-------KRAFAYFVLTGGRFVYASLIRLL 116
PA+V V N + + Y E S ++ F+Y V A + +
Sbjct: 71 PASVRYVHNDVTVPDFSAYRREDVMDATTSSQTSSEDRKGFSYLVTATACVATAYAAKNV 130
Query: 117 ILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDL 176
+ +F+ S+SAS DVLA++ +E+ LS I G V KWRGKP+F+R RT+ +I VD+
Sbjct: 131 VTQFISSLSASADVLALSKIEIKLSDIPEGKNVAFKWRGKPLFVRHRTQAEINQEAEVDV 190
Query: 177 GSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKG 236
LRDPQ D +RVK PEW+++VGVCTHLGC+P+ N+GDFGG++CPCHGSHYD SGRIRKG
Sbjct: 191 SKLRDPQHDLDRVKKPEWVILVGVCTHLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKG 250
Query: 237 PAPYNLEVPSYSFLDENKMLIG 258
PAPYNLEVP+Y F+ ++ +++G
Sbjct: 251 PAPYNLEVPTYQFVGDDLVVVG 272
>UNIPROTKB|G3MXD1 [details] [associations]
symbol:UQCRFS1 "Ubiquinol-cytochrome c reductase
iron-sulfur subunit" species:9913 "Bos taurus" [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0008121
"ubiquinol-cytochrome-c reductase activity" evidence=IEA]
[GO:0070469 "respiratory chain" evidence=IEA] [GO:0051537 "2 iron,
2 sulfur cluster binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0022900 "electron transport chain"
evidence=IEA] InterPro:IPR004192 InterPro:IPR005805
InterPro:IPR006317 InterPro:IPR014349 InterPro:IPR015248
InterPro:IPR017941 Pfam:PF00355 Pfam:PF02921 Pfam:PF09165
PRINTS:PR00162 PROSITE:PS51296 GO:GO:0005743 GO:GO:0046872
GO:GO:0022900 GO:GO:0070469 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 GO:GO:0008121 PANTHER:PTHR10134 Gene3D:1.20.5.270
InterPro:IPR011070 SUPFAM:SSF56568 TIGRFAMs:TIGR01416
GeneTree:ENSGT00390000001014 OMA:DYRRAEV EMBL:DAAA02045942
Ensembl:ENSBTAT00000066053 Uniprot:G3MXD1
Length = 271
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 90/166 (54%), Positives = 123/166 (74%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y V A + ++ +FV SMSAS DVLAM+ +E+ LS I G + K
Sbjct: 106 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFK 165
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I +V++ LRDPQ D ERVK PEW++++GVCTHLGC+P+ NA
Sbjct: 166 WRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTHLGCVPIANA 225
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIRKGPAP NLEVPSY F ++ +++G
Sbjct: 226 GDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPSYEFTSDDMVIVG 271
>UNIPROTKB|P13272 [details] [associations]
symbol:UQCRFS1 "Cytochrome b-c1 complex subunit Rieske,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005743 "mitochondrial inner
membrane" evidence=ISS] [GO:0008121 "ubiquinol-cytochrome-c
reductase activity" evidence=IEA] [GO:0070469 "respiratory chain"
evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR004192
InterPro:IPR005805 InterPro:IPR006317 InterPro:IPR014349
InterPro:IPR015248 InterPro:IPR017941 Pfam:PF00355 Pfam:PF02921
Pfam:PF09165 PRINTS:PR00162 PROSITE:PS51296 GO:GO:0016021
GO:GO:0005743 GO:GO:0046872 GO:GO:0022900 GO:GO:0070469
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 PDB:2YBB
PDBsum:2YBB PDB:1BCC PDB:1BE3 PDB:1BGY PDB:1L0L PDB:1L0N PDB:1NTK
PDB:1NTM PDB:1NTZ PDB:1NU1 PDB:1PP9 PDB:1PPJ PDB:1QCR PDB:1SQB
PDB:1SQP PDB:1SQQ PDB:1SQV PDB:1SQX PDB:2A06 PDB:2BCC PDB:2FYU
PDB:3BCC PDBsum:1BCC PDBsum:1BE3 PDBsum:1BGY PDBsum:1L0L
PDBsum:1L0N PDBsum:1NTK PDBsum:1NTM PDBsum:1NTZ PDBsum:1NU1
PDBsum:1PP9 PDBsum:1PPJ PDBsum:1QCR PDBsum:1SQB PDBsum:1SQP
PDBsum:1SQQ PDBsum:1SQV PDBsum:1SQX PDBsum:2A06 PDBsum:2BCC
PDBsum:2FYU PDBsum:3BCC TCDB:3.D.3.2.1 GO:GO:0008121
PANTHER:PTHR10134 HOVERGEN:HBG001040 Gene3D:1.20.5.270
InterPro:IPR011070 SUPFAM:SSF56568 TIGRFAMs:TIGR01416 EMBL:M34336
EMBL:S58789 EMBL:BC115994 EMBL:BC133620 EMBL:BC133632
IPI:IPI00688782 PIR:A46063 RefSeq:NP_777238.1 UniGene:Bt.265
PDB:1RIE PDBsum:1RIE DisProt:DP00019 ProteinModelPortal:P13272
SMR:P13272 IntAct:P13272 PRIDE:P13272 GeneID:287020 KEGG:bta:287020
CTD:7386 KO:K00411 EvolutionaryTrace:P13272 NextBio:20806543
Uniprot:P13272
Length = 274
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 90/166 (54%), Positives = 123/166 (74%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y V A + ++ +FV SMSAS DVLAM+ +E+ LS I G + K
Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I +V++ LRDPQ D ERVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIRKGPAP NLEVPSY F ++ +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPSYEFTSDDMVIVG 274
>UNIPROTKB|E2R1A6 [details] [associations]
symbol:UQCRFS1 "Ubiquinol-cytochrome c reductase
iron-sulfur subunit" species:9615 "Canis lupus familiaris"
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0008121 "ubiquinol-cytochrome-c reductase activity"
evidence=IEA] [GO:0070469 "respiratory chain" evidence=IEA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0022900 "electron
transport chain" evidence=IEA] InterPro:IPR004192
InterPro:IPR005805 InterPro:IPR006317 InterPro:IPR014349
InterPro:IPR015248 InterPro:IPR017941 Pfam:PF00355 Pfam:PF02921
Pfam:PF09165 PRINTS:PR00162 PROSITE:PS51296 GO:GO:0005743
GO:GO:0046872 GO:GO:0022900 GO:GO:0070469 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0008121 PANTHER:PTHR10134
Gene3D:1.20.5.270 InterPro:IPR011070 SUPFAM:SSF56568
TIGRFAMs:TIGR01416 CTD:7386 KO:K00411 GeneTree:ENSGT00390000001014
OMA:DYRRAEV EMBL:AAEX03001116 RefSeq:XP_533711.1
ProteinModelPortal:E2R1A6 Ensembl:ENSCAFT00000012203 GeneID:476503
KEGG:cfa:476503 NextBio:20852151 Uniprot:E2R1A6
Length = 274
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 88/166 (53%), Positives = 124/166 (74%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y + A + ++ +FV SMSAS DVLAM+ +E+ LS I G + K
Sbjct: 109 ARKGFSYLITATTSIGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I+ +V++ LRDPQ D +RVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTKKEIEQEAAVEVSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIRKGPAP NLEVPSY F ++ +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPSYEFTGDDMVIVG 274
>UNIPROTKB|P47985 [details] [associations]
symbol:UQCRFS1 "Cytochrome b-c1 complex subunit Rieske,
mitochondrial" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0046677 "response
to antibiotic" evidence=IEA] [GO:0008121 "ubiquinol-cytochrome-c
reductase activity" evidence=NAS] [GO:0055114 "oxidation-reduction
process" evidence=NAS] [GO:0005750 "mitochondrial respiratory chain
complex III" evidence=NAS] [GO:0005743 "mitochondrial inner
membrane" evidence=TAS] [GO:0022904 "respiratory electron transport
chain" evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR004192 InterPro:IPR005805
InterPro:IPR006317 InterPro:IPR014349 InterPro:IPR015248
InterPro:IPR017941 Pfam:PF00355 Pfam:PF02921 Pfam:PF09165
PRINTS:PR00162 PROSITE:PS51296 GO:GO:0016021 GO:GO:0044281
GO:GO:0042493 GO:GO:0046872 GO:GO:0046677 GO:GO:0009725
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0022904
GO:GO:0005750 GO:GO:0008121 PANTHER:PTHR10134 HPA:HPA041863
HOVERGEN:HBG001040 Gene3D:1.20.5.270 InterPro:IPR011070
SUPFAM:SSF56568 TIGRFAMs:TIGR01416 CTD:7386 KO:K00411 OMA:DYRRAEV
EMBL:L32977 EMBL:L32917 EMBL:AK291134 EMBL:AC007786 EMBL:BC000649
EMBL:BC010035 EMBL:BC067832 IPI:IPI00026964 RefSeq:NP_005994.2
UniGene:Hs.170107 ProteinModelPortal:P47985 SMR:P47985
IntAct:P47985 STRING:P47985 PhosphoSite:P47985 DMDM:143811471
OGP:P47985 REPRODUCTION-2DPAGE:IPI00026964 SWISS-2DPAGE:P47985
UCD-2DPAGE:P47985 PRIDE:P47985 DNASU:7386 Ensembl:ENST00000304863
GeneID:7386 KEGG:hsa:7386 UCSC:uc002nsd.2 GeneCards:GC19M029698
H-InvDB:HIX0041192 HGNC:HGNC:12587 MIM:191327 neXtProt:NX_P47985
PharmGKB:PA37218 InParanoid:P47985 PhylomeDB:P47985 ChiTaRS:UQCRFS1
GenomeRNAi:7386 NextBio:28920 ArrayExpress:P47985 Bgee:P47985
CleanEx:HS_UQCRFS1 Genevestigator:P47985 GermOnline:ENSG00000169021
Uniprot:P47985
Length = 274
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 91/167 (54%), Positives = 125/167 (74%)
Query: 93 SKRAFAYFVLTGGRFV-YASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTV 151
+++ F+Y V TG V A + + +FV SMSAS DVLA+A +E+ LS I G +
Sbjct: 109 ARKGFSYLV-TGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAF 167
Query: 152 KWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPN 211
KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ N
Sbjct: 168 KWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIAN 227
Query: 212 AGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
AGDFGG++CPCHGSHYD SGRIR GPAP NLEVP+Y F ++ +++G
Sbjct: 228 AGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
>UNIPROTKB|F1RNZ1 [details] [associations]
symbol:UQCRFS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0008121 "ubiquinol-cytochrome-c reductase activity"
evidence=IEA] InterPro:IPR004192 InterPro:IPR005805
InterPro:IPR006317 InterPro:IPR014349 InterPro:IPR015248
InterPro:IPR017941 Pfam:PF00355 Pfam:PF02921 Pfam:PF09165
PRINTS:PR00162 PROSITE:PS51296 GO:GO:0005743 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0008121 PANTHER:PTHR10134
Gene3D:1.20.5.270 InterPro:IPR011070 SUPFAM:SSF56568
TIGRFAMs:TIGR01416 KO:K00411 GeneTree:ENSGT00390000001014
OMA:DYRRAEV EMBL:FP245509 RefSeq:XP_003127050.1 UniGene:Ssc.1854
Ensembl:ENSSSCT00000030609 GeneID:100522678 KEGG:ssc:100522678
ArrayExpress:F1RNZ1 Uniprot:F1RNZ1
Length = 274
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 88/166 (53%), Positives = 122/166 (73%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y + A + + +FV SMSAS DVLAM+ +E+ LS I G + K
Sbjct: 109 ARKGFSYLITATTTVGVAYAAKNAVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I +V++ LRDPQ D ERVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIRKGPAP NLEVP+Y F ++ +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPTYEFTSDDLVIVG 274
>DICTYBASE|DDB_G0284947 [details] [associations]
symbol:ucr "Rieske iron-sulfur protein" species:44689
"Dictyostelium discoideum" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=IEA] [GO:0016679 "oxidoreductase activity, acting
on diphenols and related substances as donors" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0008121 "ubiquinol-cytochrome-c
reductase activity" evidence=IEA;ISS] [GO:0006122 "mitochondrial
electron transport, ubiquinol to cytochrome c" evidence=ISS]
[GO:0005750 "mitochondrial respiratory chain complex III"
evidence=ISS] [GO:0070469 "respiratory chain" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0022900 "electron transport
chain" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR004192
InterPro:IPR005805 InterPro:IPR006317 InterPro:IPR014349
InterPro:IPR017941 Pfam:PF00355 Pfam:PF02921 PRINTS:PR00162
PROSITE:PS51296 dictyBase:DDB_G0284947 GenomeReviews:CM000153_GR
GO:GO:0046872 EMBL:AAFI02000073 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 GO:GO:0005750 GO:GO:0006122 GO:GO:0008121
eggNOG:COG0723 PANTHER:PTHR10134 Gene3D:1.20.5.270
TIGRFAMs:TIGR01416 KO:K00411 RefSeq:XP_639948.2 STRING:Q54NW9
PRIDE:Q54NW9 EnsemblProtists:DDB0238608 GeneID:8624860
KEGG:ddi:DDB_G0284947 OMA:MIYASAL ProtClustDB:CLSZ2430439
Uniprot:Q54NW9
Length = 214
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 99/212 (46%), Positives = 137/212 (64%)
Query: 49 SGYLGPQFQLPCRGVPATVAAVKNPTSKIV--YDEYNHERYPPGDPSKRAFAYFVLTGGR 106
S + P CR AT V + TS +++Y E+ DP R FAY V+ G
Sbjct: 3 SRFFKPSLVKNCRTF-ATYNTVNSTTSFPTSHFEKYRAEKNEV-DPENRGFAYLVVGGAG 60
Query: 107 FVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEE 166
A++ + ++ + +MS +D+LA++S+EVDLS I + V VKWRGKP+FIR R+ E
Sbjct: 61 AGLAAIAKNTVVTALSTMSPGQDILALSSVEVDLSGIPESTAVVVKWRGKPLFIRHRSAE 120
Query: 167 DIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSH 226
+I + +V L +L DPQ D R K PEW+++VGVCTHLGCIP+ GD+ GW+CPCHGSH
Sbjct: 121 EISESQAVQLSTLPDPQADNARSKVPEWIILVGVCTHLGCIPISGGGDYNGWYCPCHGSH 180
Query: 227 YDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
YD +GRIRKGPAP NL VP Y F+ +K+++G
Sbjct: 181 YDNAGRIRKGPAPMNLIVPPYKFITSDKIIVG 212
>MGI|MGI:1913944 [details] [associations]
symbol:Uqcrfs1 "ubiquinol-cytochrome c reductase, Rieske
iron-sulfur polypeptide 1" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005750 "mitochondrial respiratory chain complex
III" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0008121 "ubiquinol-cytochrome-c reductase activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016679 "oxidoreductase activity,
acting on diphenols and related substances as donors" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=ISO] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0070469 "respiratory chain" evidence=IEA]
InterPro:IPR004192 InterPro:IPR005805 InterPro:IPR006317
InterPro:IPR014349 InterPro:IPR015248 InterPro:IPR017941
Pfam:PF00355 Pfam:PF02921 Pfam:PF09165 PRINTS:PR00162
PROSITE:PS51296 MGI:MGI:1913944 GO:GO:0016021 GO:GO:0005743
GO:GO:0042493 GO:GO:0046872 GO:GO:0046677 GO:GO:0022900
GO:GO:0009725 GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022
GO:GO:0005750 GO:GO:0008121 eggNOG:COG0723 PANTHER:PTHR10134
HOGENOM:HOG000255193 HOVERGEN:HBG001040 OrthoDB:EOG4VMFG4
Gene3D:1.20.5.270 InterPro:IPR011070 SUPFAM:SSF56568
TIGRFAMs:TIGR01416 CTD:7386 KO:K00411 GeneTree:ENSGT00390000001014
OMA:DYRRAEV EMBL:AK003966 EMBL:AK012180 EMBL:AK014470 EMBL:AK153139
EMBL:AK152391 EMBL:AL611944 EMBL:BC019934 IPI:IPI00133240
RefSeq:NP_079986.1 UniGene:Mm.181933 ProteinModelPortal:Q9CR68
SMR:Q9CR68 IntAct:Q9CR68 STRING:Q9CR68 PhosphoSite:Q9CR68
PaxDb:Q9CR68 PRIDE:Q9CR68 Ensembl:ENSMUST00000042834 GeneID:66694
KEGG:mmu:66694 UCSC:uc007pyv.2 InParanoid:Q9CR68 NextBio:322393
Bgee:Q9CR68 Genevestigator:Q9CR68 GermOnline:ENSMUSG00000038462
Uniprot:Q9CR68
Length = 274
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 88/166 (53%), Positives = 123/166 (74%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y V A + ++ +FV SMSAS DVLAM+ +E+ LS I G + K
Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I +V++ LRDPQ D +RVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIRKGPAP NLEVP+Y F ++ +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPAYEFTSDDVVVVG 274
>UNIPROTKB|P0C7P4 [details] [associations]
symbol:UQCRFS1P1 "Putative cytochrome b-c1 complex subunit
Rieske-like protein 1" species:9606 "Homo sapiens" [GO:0008121
"ubiquinol-cytochrome-c reductase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR004192 InterPro:IPR005805 InterPro:IPR006317
InterPro:IPR014349 InterPro:IPR015248 InterPro:IPR017941
Pfam:PF00355 Pfam:PF02921 Pfam:PF09165 PRINTS:PR00162
PROSITE:PS51296 GO:GO:0005739 GO:GO:0016020 GO:GO:0046872
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0008121
EMBL:Z82206 eggNOG:COG0723 PANTHER:PTHR10134 EMBL:CR592425
IPI:IPI00889196 ProteinModelPortal:P0C7P4 SMR:P0C7P4 STRING:P0C7P4
DMDM:193806571 UCD-2DPAGE:P0C7P4 PaxDb:P0C7P4 PRIDE:P0C7P4
GeneCards:GC22P040273 HGNC:HGNC:12588 HPA:HPA041863
neXtProt:NX_P0C7P4 HOGENOM:HOG000255193 HOVERGEN:HBG001040
InParanoid:P0C7P4 OrthoDB:EOG4VMFG4 ArrayExpress:P0C7P4
Genevestigator:P0C7P4 Gene3D:1.20.5.270 InterPro:IPR011070
SUPFAM:SSF56568 TIGRFAMs:TIGR01416 Uniprot:P0C7P4
Length = 283
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 91/167 (54%), Positives = 124/167 (74%)
Query: 93 SKRAFAYFVLTGGRFV-YASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTV 151
+++ F+Y V TG V A + + +FV SMSAS DVLA+A +E+ LS I G +
Sbjct: 118 ARKGFSYLV-TGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAF 176
Query: 152 KWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPN 211
KWRGKP+F+R RT+++IK +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ N
Sbjct: 177 KWRGKPLFVRHRTQKEIKQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIAN 236
Query: 212 AGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
AGDFGG++CPCHGSHYD SGRIR GPA NLEVP+Y F ++ +++G
Sbjct: 237 AGDFGGYYCPCHGSHYDASGRIRLGPATLNLEVPTYEFTSDDMVIVG 283
>RGD|628838 [details] [associations]
symbol:Uqcrfs1 "ubiquinol-cytochrome c reductase, Rieske
iron-sulfur polypeptide 1" species:10116 "Rattus norvegicus"
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0005750
"mitochondrial respiratory chain complex III" evidence=IDA]
[GO:0008121 "ubiquinol-cytochrome-c reductase activity"
evidence=TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEP] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IDA] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0042493 "response to drug" evidence=IEP]
[GO:0045275 "respiratory chain complex III" evidence=TAS]
[GO:0046677 "response to antibiotic" evidence=IEP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IEA] InterPro:IPR004192
InterPro:IPR005805 InterPro:IPR006317 InterPro:IPR014349
InterPro:IPR015248 InterPro:IPR017941 Pfam:PF00355 Pfam:PF02921
Pfam:PF09165 PRINTS:PR00162 PROSITE:PS51296 RGD:628838
GO:GO:0016021 GO:GO:0032403 GO:GO:0042493 GO:GO:0046872
GO:GO:0046677 GO:GO:0022900 GO:GO:0009725 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0005750 GO:GO:0008121
eggNOG:COG0723 PANTHER:PTHR10134 HOGENOM:HOG000255193
HOVERGEN:HBG001040 OrthoDB:EOG4VMFG4 Gene3D:1.20.5.270
InterPro:IPR011070 SUPFAM:SSF56568 TIGRFAMs:TIGR01416 CTD:7386
KO:K00411 GeneTree:ENSGT00390000001014 OMA:DYRRAEV EMBL:AY539946
EMBL:BC085339 EMBL:M24542 IPI:IPI00362949 PIR:A32296
RefSeq:NP_001008888.1 UniGene:Rn.2603 ProteinModelPortal:P20788
SMR:P20788 IntAct:P20788 STRING:P20788 PRIDE:P20788
Ensembl:ENSRNOT00000024609 GeneID:291103 KEGG:rno:291103
UCSC:RGD:628838 InParanoid:P20788 NextBio:632121
Genevestigator:P20788 GermOnline:ENSRNOG00000018281 Uniprot:P20788
Length = 274
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 89/166 (53%), Positives = 121/166 (72%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y V A + + +FV SMSAS DVLAM+ +E+ LS I G + K
Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNAVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I +V++ LRDPQ D ERVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIRKGPAP NLEVP+Y F + +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPTYEFTSGDVVVVG 274
>GENEDB_PFALCIPARUM|PF14_0373 [details] [associations]
symbol:PF14_0373 "iron-sulphur protein subunit
of the cytochrome bc1 complex" species:5833 "Plasmodium falciparum"
[GO:0005750 "mitochondrial respiratory chain complex III"
evidence=ISS] InterPro:IPR004192 InterPro:IPR005805
InterPro:IPR006317 InterPro:IPR014349 InterPro:IPR017941
Pfam:PF00355 Pfam:PF02921 PRINTS:PR00162 PROSITE:PS51296
GO:GO:0046872 EMBL:AE014187 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 GO:GO:0005750 GO:GO:0008121 PANTHER:PTHR10134
TIGRFAMs:TIGR01416 KO:K00411 HSSP:P13272 RefSeq:XP_001348547.1
ProteinModelPortal:Q8IL75 PRIDE:Q8IL75
EnsemblProtists:PF14_0373:mRNA GeneID:811955 KEGG:pfa:PF14_0373
EuPathDB:PlasmoDB:PF3D7_1439400 HOGENOM:HOG000282162 OMA:PDFREYR
ProtClustDB:CLSZ2432190 Uniprot:Q8IL75
Length = 355
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 88/182 (48%), Positives = 124/182 (68%)
Query: 79 YDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEV 138
+ ++ R G+ +R+F YF+ F+ +S++R I K V SKD++A + E+
Sbjct: 175 HPDFREYRLRSGNEDRRSFMYFISASYFFIMSSIMRSAICKSVHFFWISKDLVAGGTTEL 234
Query: 139 DLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVD--LGSLRDPQQDAERVKNPEWLV 196
D+ ++ PG V +KWRGKPVF++ RT EDI+ A D + ++RDPQ D++R PEWLV
Sbjct: 235 DMRTVNPGEHVVIKWRGKPVFVKHRTPEDIQRAKEDDKLIQTMRDPQLDSDRTIKPEWLV 294
Query: 197 VVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKML 256
+G+CTHLGC+P G++ G+FCPCHGSHYD SGRIR+GPAP NLEVP Y F+DEN +
Sbjct: 295 NIGICTHLGCVPA-QGGNYSGYFCPCHGSHYDNSGRIRQGPAPSNLEVPPYEFVDENTIK 353
Query: 257 IG 258
IG
Sbjct: 354 IG 355
>UNIPROTKB|Q8IL75 [details] [associations]
symbol:PF14_0373 "Ubiquinol-cytochrome C reductase
iron-sulfur subunit, putative" species:36329 "Plasmodium falciparum
3D7" [GO:0005750 "mitochondrial respiratory chain complex III"
evidence=ISS] InterPro:IPR004192 InterPro:IPR005805
InterPro:IPR006317 InterPro:IPR014349 InterPro:IPR017941
Pfam:PF00355 Pfam:PF02921 PRINTS:PR00162 PROSITE:PS51296
GO:GO:0046872 EMBL:AE014187 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 GO:GO:0005750 GO:GO:0008121 PANTHER:PTHR10134
TIGRFAMs:TIGR01416 KO:K00411 HSSP:P13272 RefSeq:XP_001348547.1
ProteinModelPortal:Q8IL75 PRIDE:Q8IL75
EnsemblProtists:PF14_0373:mRNA GeneID:811955 KEGG:pfa:PF14_0373
EuPathDB:PlasmoDB:PF3D7_1439400 HOGENOM:HOG000282162 OMA:PDFREYR
ProtClustDB:CLSZ2432190 Uniprot:Q8IL75
Length = 355
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 88/182 (48%), Positives = 124/182 (68%)
Query: 79 YDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEV 138
+ ++ R G+ +R+F YF+ F+ +S++R I K V SKD++A + E+
Sbjct: 175 HPDFREYRLRSGNEDRRSFMYFISASYFFIMSSIMRSAICKSVHFFWISKDLVAGGTTEL 234
Query: 139 DLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVD--LGSLRDPQQDAERVKNPEWLV 196
D+ ++ PG V +KWRGKPVF++ RT EDI+ A D + ++RDPQ D++R PEWLV
Sbjct: 235 DMRTVNPGEHVVIKWRGKPVFVKHRTPEDIQRAKEDDKLIQTMRDPQLDSDRTIKPEWLV 294
Query: 197 VVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKML 256
+G+CTHLGC+P G++ G+FCPCHGSHYD SGRIR+GPAP NLEVP Y F+DEN +
Sbjct: 295 NIGICTHLGCVPA-QGGNYSGYFCPCHGSHYDNSGRIRQGPAPSNLEVPPYEFVDENTIK 353
Query: 257 IG 258
IG
Sbjct: 354 IG 355
>TIGR_CMR|APH_0401 [details] [associations]
symbol:APH_0401 "ubiquinol-cytochrome c reductase,
iron-sulfur subunit" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0008121 "ubiquinol-cytochrome-c reductase activity"
evidence=ISS] [GO:0009055 "electron carrier activity" evidence=ISS]
InterPro:IPR005805 InterPro:IPR006317 InterPro:IPR014349
InterPro:IPR017941 Pfam:PF00355 PRINTS:PR00162 PROSITE:PS51296
GO:GO:0016020 GO:GO:0046872 GO:GO:0022900 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 GO:GO:0008121 eggNOG:COG0723 PANTHER:PTHR10134
HOGENOM:HOG000255193 TIGRFAMs:TIGR01416 KO:K00411 OMA:WRSIKPE
ProtClustDB:CLSK749374 RefSeq:YP_505006.1 ProteinModelPortal:Q2GKU5
STRING:Q2GKU5 GeneID:3930759 KEGG:aph:APH_0401 PATRIC:20949412
BioCyc:APHA212042:GHPM-429-MONOMER Uniprot:Q2GKU5
Length = 189
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 84/156 (53%), Positives = 114/156 (73%)
Query: 108 VYASLIRLLILKFVL--SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTE 165
++ S I + + L S+S S +V+A +++EVDL+SI+ GST VKW+GKPVF+RRRT+
Sbjct: 29 LFMSFIGIFSFLYPLFRSLSPSAEVMAQSTVEVDLTSIKEGSTKVVKWQGKPVFVRRRTK 88
Query: 166 EDIKLANSVDLGSLRDPQQDAER--VKNPEWLVVVGVCTHLGCIPLP-NAGDFGGWFCPC 222
E+I+ A +VD+ LRDPQ D +R V EWLV+VG+CTHLGC+P +GD GW+CPC
Sbjct: 89 EEIEKARAVDISGLRDPQTDQQRTFVGKEEWLVMVGICTHLGCVPTEVKSGD-KGWYCPC 147
Query: 223 HGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
HGS YD SGRI GPAP NL +P Y F+D++ M+IG
Sbjct: 148 HGSKYDTSGRILAGPAPLNLPIPDYHFVDDSTMVIG 183
>TIGR_CMR|NSE_0624 [details] [associations]
symbol:NSE_0624 "ubiquinol-cytochrome c reductase,
iron-sulfur subunit" species:222891 "Neorickettsia sennetsu str.
Miyayama" [GO:0008121 "ubiquinol-cytochrome-c reductase activity"
evidence=ISS] [GO:0009055 "electron carrier activity" evidence=ISS]
InterPro:IPR005805 InterPro:IPR006317 InterPro:IPR014349
InterPro:IPR017941 InterPro:IPR019470 Pfam:PF00355 Pfam:PF10399
PRINTS:PR00162 PROSITE:PS51296 GO:GO:0016020 GO:GO:0046872
GO:GO:0022900 GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022
EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0008121
eggNOG:COG0723 PANTHER:PTHR10134 HOGENOM:HOG000255193
TIGRFAMs:TIGR01416 KO:K00411 RefSeq:YP_506503.1
ProteinModelPortal:Q2GDE3 STRING:Q2GDE3 GeneID:3931477
KEGG:nse:NSE_0624 PATRIC:22681275 OMA:WRSIKPE
ProtClustDB:CLSK2527663 BioCyc:NSEN222891:GHFU-639-MONOMER
Uniprot:Q2GDE3
Length = 173
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 82/138 (59%), Positives = 105/138 (76%)
Query: 123 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDP 182
S S DVLA A+ EVD+S+++PG V V W+GKPV+IR RTEE+I++A + DL SL+DP
Sbjct: 32 SFGPSADVLATATREVDISNVKPGQGVKVLWQGKPVYIRNRTEEEIRMARNADLTSLKDP 91
Query: 183 QQDAERVK-NPE-WLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPY 240
++DA RVK N E WLVVVGVCTHLGC+PL N G +FCPCHGSHYD SGR+ GPAP
Sbjct: 92 ERDAARVKPNKENWLVVVGVCTHLGCVPLSNTD--GTFFCPCHGSHYDTSGRVVSGPAPT 149
Query: 241 NLEVPSYSFLDENKMLIG 258
NL VP Y F+++ +++G
Sbjct: 150 NLVVPDYYFINDTTVVVG 167
>WB|WBGene00002162 [details] [associations]
symbol:isp-1 species:6239 "Caenorhabditis elegans"
[GO:0008121 "ubiquinol-cytochrome-c reductase activity"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016679
"oxidoreductase activity, acting on diphenols and related
substances as donors" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0006122 "mitochondrial electron transport,
ubiquinol to cytochrome c" evidence=IMP] InterPro:IPR004192
InterPro:IPR005805 InterPro:IPR006317 InterPro:IPR014349
InterPro:IPR017941 Pfam:PF00355 Pfam:PF02921 PRINTS:PR00162
PROSITE:PS51296 GO:GO:0005739 GO:GO:0009792 GO:GO:0046872
GO:GO:0000003 GO:GO:0070469 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 GO:GO:0006122 GO:GO:0008121 EMBL:FO080126
eggNOG:COG0723 PANTHER:PTHR10134 HOGENOM:HOG000255193
Gene3D:1.20.5.270 TIGRFAMs:TIGR01416 KO:K00411
GeneTree:ENSGT00390000001014 PIR:T32640 RefSeq:NP_501361.1
HSSP:P13272 ProteinModelPortal:O44512 SMR:O44512 DIP:DIP-24805N
MINT:MINT-1101815 STRING:O44512 World-2DPAGE:0011:O44512
PaxDb:O44512 EnsemblMetazoa:F42G8.12.1 EnsemblMetazoa:F42G8.12.2
GeneID:177609 KEGG:cel:CELE_F42G8.12 UCSC:F42G8.12.1 CTD:177609
WormBase:F42G8.12 InParanoid:O44512 OMA:KFRSINP NextBio:897576
Uniprot:O44512
Length = 276
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 77/143 (53%), Positives = 107/143 (74%)
Query: 117 ILKFVLSMSA-SKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVD 175
+++ ++S A + D A+AS+E++++ I G T T +WRGKPVF++ RT+ +I +V
Sbjct: 133 VVQTLVSYKAMAADQRALASIEINMADIPEGKTKTFEWRGKPVFVKHRTKAEIAKEKAVP 192
Query: 176 LGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRK 235
+ LR PQ D ERV+ EW VV+GVCTHLGC+P+ +AGD+GG++CPCHGSHYD SGRIRK
Sbjct: 193 VADLRHPQHDDERVQKDEWSVVIGVCTHLGCVPIADAGDYGGYYCPCHGSHYDASGRIRK 252
Query: 236 GPAPYNLEVPSYSFLDENKMLIG 258
GPAP NL VP+YSF D ++IG
Sbjct: 253 GPAPLNLHVPAYSFKDAT-IVIG 274
>TIGR_CMR|SPO_0271 [details] [associations]
symbol:SPO_0271 "ubiquinol-cytochrome c reductase,
iron-sulfur subunit" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0008121 "ubiquinol-cytochrome-c reductase activity"
evidence=ISS] [GO:0009055 "electron carrier activity" evidence=ISS]
[GO:0009060 "aerobic respiration" evidence=ISS] InterPro:IPR005805
InterPro:IPR006317 InterPro:IPR014349 InterPro:IPR017941
InterPro:IPR019470 Pfam:PF00355 Pfam:PF10399 PRINTS:PR00162
PROSITE:PS51296 GO:GO:0016020 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0046872 InterPro:IPR006311
GO:GO:0022900 GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022
PROSITE:PS51318 InterPro:IPR019546 TIGRFAMs:TIGR01409 GO:GO:0008121
PANTHER:PTHR10134 HOGENOM:HOG000255193 TIGRFAMs:TIGR01416 KO:K00411
OMA:IFITNRT RefSeq:YP_165535.1 ProteinModelPortal:Q5LX56 SMR:Q5LX56
GeneID:3196282 KEGG:sil:SPO0271 PATRIC:23373793
ProtClustDB:CLSK933199 Uniprot:Q5LX56
Length = 187
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 88/181 (48%), Positives = 115/181 (63%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
++R F Y+ G V + V M+ S DV A++S+ VD+S +E G+ ++VK
Sbjct: 10 TRRDFLYYATAGAGVVTTGAA---VWPLVNQMNPSADVQALSSIRVDISGVEVGTQISVK 66
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSL-----RDPQQ-------DAERV--KNPEWLVVV 198
+ GKPVFIRRRT+ +I A +VDL L R+P D R +N EWLV++
Sbjct: 67 FLGKPVFIRRRTQAEIDEARAVDLSDLIDNDSRNPNLSGGGDGGDENRSLDENGEWLVMM 126
Query: 199 GVCTHLGCIPLPN-AGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLI 257
GVCTHLGC+PL + AGDF GWFCPCHGSHYD SGRIRKGPAP NL +P F+DEN + +
Sbjct: 127 GVCTHLGCVPLGDGAGDFHGWFCPCHGSHYDTSGRIRKGPAPENLHIPVAEFVDENTIKL 186
Query: 258 G 258
G
Sbjct: 187 G 187
>TIGR_CMR|ECH_0520 [details] [associations]
symbol:ECH_0520 "ubiquinol-cytochrome c reductase,
iron-sulfur subunit" species:205920 "Ehrlichia chaffeensis str.
Arkansas" [GO:0008121 "ubiquinol-cytochrome-c reductase activity"
evidence=ISS] [GO:0009055 "electron carrier activity" evidence=ISS]
InterPro:IPR005805 InterPro:IPR006317 InterPro:IPR014349
InterPro:IPR017941 InterPro:IPR019470 Pfam:PF00355 Pfam:PF10399
PRINTS:PR00162 PROSITE:PS51296 GO:GO:0016020 GO:GO:0046872
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0022900 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0008121 eggNOG:COG0723
PANTHER:PTHR10134 HOGENOM:HOG000255193 TIGRFAMs:TIGR01416 KO:K00411
OMA:WRSIKPE RefSeq:YP_507335.1 ProteinModelPortal:Q2GGU8
STRING:Q2GGU8 GeneID:3927644 KEGG:ech:ECH_0520 PATRIC:20576508
ProtClustDB:CLSK749374 BioCyc:ECHA205920:GJNR-522-MONOMER
Uniprot:Q2GGU8
Length = 187
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 74/144 (51%), Positives = 102/144 (70%)
Query: 117 ILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDL 176
++KF +S S +V+A +++EV+LS I+ G T +KW+GKPVFIR+RT ++I+ A +V +
Sbjct: 40 LIKF---LSPSAEVIAQSTVEVNLSDIKEGKTKVIKWQGKPVFIRKRTTQEIEEARAVKI 96
Query: 177 GSLRDPQQDAERVKN--PEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIR 234
SLRDPQ D ER EWL++VG+CTHLGC+P+ GW+CPCHGS YD SGRI
Sbjct: 97 DSLRDPQSDQERTHQGREEWLIMVGICTHLGCVPVEVDDGKKGWYCPCHGSKYDTSGRII 156
Query: 235 KGPAPYNLEVPSYSFLDENKMLIG 258
GPAP NL VP Y F ++ ++IG
Sbjct: 157 SGPAPLNLPVPDYYFSQKDVIVIG 180
>TIGR_CMR|CPS_4440 [details] [associations]
symbol:CPS_4440 "ubiquinol-cytochrome c reductase,
iron-sulfur subunit" species:167879 "Colwellia psychrerythraea 34H"
[GO:0008121 "ubiquinol-cytochrome-c reductase activity"
evidence=ISS] [GO:0009055 "electron carrier activity" evidence=ISS]
[GO:0009060 "aerobic respiration" evidence=ISS] [GO:0045275
"respiratory chain complex III" evidence=ISS] InterPro:IPR005805
InterPro:IPR006317 InterPro:IPR014349 InterPro:IPR017941
InterPro:IPR019470 Pfam:PF00355 Pfam:PF10399 PRINTS:PR00162
PROSITE:PS51296 GO:GO:0016020 GO:GO:0046872 InterPro:IPR006311
GO:GO:0022900 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 PROSITE:PS51318 GO:GO:0008121
eggNOG:COG0723 PANTHER:PTHR10134 TIGRFAMs:TIGR01416 KO:K00411
RefSeq:YP_271088.1 ProteinModelPortal:Q47VT4 STRING:Q47VT4
GeneID:3522982 KEGG:cps:CPS_4440 PATRIC:21471719
HOGENOM:HOG000255194 OMA:IFITNRT ProtClustDB:CLSK874014
BioCyc:CPSY167879:GI48-4449-MONOMER Uniprot:Q47VT4
Length = 196
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 42/83 (50%), Positives = 59/83 (71%)
Query: 185 DAERVKNPEWLVVVGVCTHLGCIPLPNAGDF--------GGWFCPCHGSHYDISGRIRKG 236
+A R PE+LV +GVCTHLGC P +AGDF G+FCPCHGS +D++GR+ +G
Sbjct: 108 NAYRSIKPEFLVALGVCTHLGCAPTHHAGDFDQFVEGVPNGFFCPCHGSKFDMAGRVFQG 167
Query: 237 -PAPYNLEVPSYSFLDENKMLIG 258
PAP NL VP +S+++++ +LIG
Sbjct: 168 VPAPLNLVVPEHSYINDDTLLIG 190
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 49/108 (45%), Positives = 64/108 (59%)
Query: 120 FVLSMSASKDVLAM-ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIK-LANSVDLG 177
F+ S + S A A +EV++ I+PG + +WRGKPV+I RRTE+ + LA D
Sbjct: 33 FIASWNPSARAKAAGAPVEVNIGKIQPGQLIRAEWRGKPVYIVRRTEKTVSNLAKHDD-- 90
Query: 178 SLRDP-----QQ-----DAERVKNPEWLVVVGVCTHLGCIPLPNAGDF 215
LRDP QQ +A R PE+LV +GVCTHLGC P +AGDF
Sbjct: 91 QLRDPDSEKAQQPVYATNAYRSIKPEFLVALGVCTHLGCAPTHHAGDF 138
>FB|FBgn0021906 [details] [associations]
symbol:RFeSP "Rieske iron-sulfur protein" species:7227
"Drosophila melanogaster" [GO:0005750 "mitochondrial respiratory
chain complex III" evidence=ISS] [GO:0008121
"ubiquinol-cytochrome-c reductase activity" evidence=ISS]
[GO:0006122 "mitochondrial electron transport, ubiquinol to
cytochrome c" evidence=ISS] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR004192 InterPro:IPR014349 InterPro:IPR017941
Pfam:PF02921 GO:GO:0005739 GO:GO:0005875 EMBL:AE014134
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0008121
PANTHER:PTHR10134 Gene3D:1.20.5.270 KO:K00411
GeneTree:ENSGT00390000001014 HSSP:P13272 EMBL:BT133353
RefSeq:NP_524748.1 UniGene:Dm.10520 SMR:Q9VQ28 MINT:MINT-773788
STRING:Q9VQ28 EnsemblMetazoa:FBtr0077914 GeneID:44390
KEGG:dme:Dmel_CG7361 UCSC:CG7361-RA CTD:44390 FlyBase:FBgn0021906
InParanoid:Q9VQ28 OrthoDB:EOG42FR0J GenomeRNAi:44390 NextBio:837219
Uniprot:Q9VQ28
Length = 260
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 45/102 (44%), Positives = 65/102 (63%)
Query: 94 KRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKW 153
++AF+Y ++ G A + L+ F+ SMSAS +VLAMA +E+ LS I G +VT KW
Sbjct: 66 RKAFSYLMVGAGAVGGAYAAKGLVNTFIGSMSASAEVLAMAKIEIKLSDIPEGKSVTFKW 125
Query: 154 RGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWL 195
RGKP+FIR RT +I+ +V +LRDP+ A+ V EW+
Sbjct: 126 RGKPLFIRHRTAAEIETERNVPTSTLRDPE--ADDVGTVEWV 165
>TIGR_CMR|CJE_1320 [details] [associations]
symbol:CJE_1320 "ubiquinol--cytochrome c reductase,
iron-sulfur subunit" species:195099 "Campylobacter jejuni RM1221"
[GO:0008121 "ubiquinol-cytochrome-c reductase activity"
evidence=ISS] [GO:0009055 "electron carrier activity" evidence=ISS]
[GO:0009060 "aerobic respiration" evidence=ISS] InterPro:IPR005805
InterPro:IPR006317 InterPro:IPR014349 InterPro:IPR017941
Pfam:PF00355 PRINTS:PR00162 PROSITE:PS51296 GO:GO:0016020
GO:GO:0046872 GO:GO:0022900 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0008121
eggNOG:COG0723 PANTHER:PTHR10134 HOGENOM:HOG000255193
TIGRFAMs:TIGR01416 KO:K00411 OMA:WRSIKPE PIR:D81324
RefSeq:YP_179307.1 ProteinModelPortal:Q5HTS8 STRING:Q5HTS8
GeneID:3231827 KEGG:cjr:CJE1320 PATRIC:20044440
ProtClustDB:CLSK872585 BioCyc:CJEJ195099:GJC0-1346-MONOMER
Uniprot:Q5HTS8
Length = 167
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 54/166 (32%), Positives = 82/166 (49%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
S+R+F F G + L+ +K S V A VDLS ++ G T++
Sbjct: 6 SRRSFMGFAF-GSVAAVGGVFSLVAMKKTWDPLPS--VKAAGFTTVDLSGMQDGELRTIE 62
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WR KP+FI ++ D +D ++D V N + VV+G+CTHLGCIP
Sbjct: 63 WRKKPIFILKK-----------DASMPKDEKRDVV-VDNAAYTVVIGLCTHLGCIPAYQP 110
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
+ + C CHG +D SG+ GP P LE+P + +D K+++G
Sbjct: 111 SE-QLFKCACHGGEFDTSGKNVFGPPPKPLEIPPFK-IDGTKLVLG 154
>TIGR_CMR|SO_0608 [details] [associations]
symbol:SO_0608 "ubiquinol-cytochrome c reductase,
iron-sulfur subunit" species:211586 "Shewanella oneidensis MR-1"
[GO:0008121 "ubiquinol-cytochrome-c reductase activity"
evidence=ISS] [GO:0009055 "electron carrier activity" evidence=ISS]
InterPro:IPR005805 InterPro:IPR006317 InterPro:IPR014349
InterPro:IPR017941 InterPro:IPR019470 Pfam:PF00355 Pfam:PF10399
PRINTS:PR00162 PROSITE:PS51296 GO:GO:0016020 GO:GO:0046872
InterPro:IPR006311 GO:GO:0022900 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 PROSITE:PS51318 GO:GO:0008121 PANTHER:PTHR10134
TIGRFAMs:TIGR01416 KO:K00411 OMA:PHQYIDD HSSP:P13272
HOGENOM:HOG000255194 ProtClustDB:CLSK874014 RefSeq:NP_716241.1
ProteinModelPortal:Q8EJ64 GeneID:1168474 KEGG:son:SO_0608
PATRIC:23520904 Uniprot:Q8EJ64
Length = 196
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 44/124 (35%), Positives = 71/124 (57%)
Query: 146 GSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKN--PEWLVVVGVCTH 203
G V V R + V I D +L + ++ P+ +++ PE+ + VG+CTH
Sbjct: 69 GKPVWVVRRTEAV-INELPTHDAQLRDPAS-AEMQQPEYATNPLRSIKPEYFIAVGICTH 126
Query: 204 LGCIP--LPNA------GDFGGWFCPCHGSHYDISGRIRKG-PAPYNLEVPSYSFLDENK 254
LGC P LP++ G G+FCPCHGS +D++GR+ +G PAP NL +P + ++D+
Sbjct: 127 LGCSPTYLPDSFAEQVQGVTSGFFCPCHGSKFDMAGRVFQGVPAPLNLVIPPHQYVDDGT 186
Query: 255 MLIG 258
++IG
Sbjct: 187 VIIG 190
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 53/139 (38%), Positives = 74/139 (53%)
Query: 89 PGDPSKRAF--AYFVLTGGRFVYASLIRLLILKFVLSMSAS-KDVLAMASLEVDLSSIEP 145
P D +R F A + GG A + + + F+ S + S K A A +EV++S +EP
Sbjct: 5 PVDTGRRRFLTAATAVVGG----AGAVAVAV-PFIKSWNPSAKAKAAGAPVEVNISKVEP 59
Query: 146 GSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDP----QQDAERVKNP------EWL 195
G + V+WRGKPV++ RRTE I + D LRDP Q E NP E+
Sbjct: 60 GQLIRVEWRGKPVWVVRRTEAVINELPTHD-AQLRDPASAEMQQPEYATNPLRSIKPEYF 118
Query: 196 VVVGVCTHLGCIP--LPNA 212
+ VG+CTHLGC P LP++
Sbjct: 119 IAVGICTHLGCSPTYLPDS 137
>UNIPROTKB|Q9KUE8 [details] [associations]
symbol:VC_0573 "Ubiquinol-cytochrome c reductase
iron-sulfur subunit" species:243277 "Vibrio cholerae O1 biovar El
Tor str. N16961" [GO:0008121 "ubiquinol-cytochrome-c reductase
activity" evidence=ISS] InterPro:IPR005805 InterPro:IPR006317
InterPro:IPR014349 InterPro:IPR017941 InterPro:IPR019470
Pfam:PF00355 Pfam:PF10399 PRINTS:PR00162 PROSITE:PS51296
GO:GO:0016020 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
InterPro:IPR006311 GO:GO:0022900 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 PROSITE:PS51318 GO:GO:0008121 PANTHER:PTHR10134
TIGRFAMs:TIGR01416 KO:K00411 HSSP:P13272 OMA:WRSIKPE
ProtClustDB:CLSK874014 PIR:B82305 RefSeq:NP_230224.1
ProteinModelPortal:Q9KUE8 DNASU:2615250 GeneID:2615250
KEGG:vch:VC0573 PATRIC:20080260 Uniprot:Q9KUE8
Length = 197
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 45/123 (36%), Positives = 71/123 (57%)
Query: 146 GSTVTVKWRGKPVFIRRRTEED-IKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHL 204
G V V R + V ++ E+ ++ NS +L Q +K PE+ + VG+CTHL
Sbjct: 69 GKPVWVVRRSQAVVEGLKSHENQLRDPNSDELQQPNYAQNPYRSIK-PEYFIAVGICTHL 127
Query: 205 GCIP--LPNA------GDFGGWFCPCHGSHYDISGRIRKG-PAPYNLEVPSYSFLDENKM 255
GC P LP++ G G+FCPCHGS +D++GR+ + PAP NL +P + +L + ++
Sbjct: 128 GCSPTYLPDSFSEQVQGVKSGFFCPCHGSKFDMAGRVFQAVPAPLNLVIPPHMYLSDTRI 187
Query: 256 LIG 258
+IG
Sbjct: 188 VIG 190
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 41/106 (38%), Positives = 61/106 (57%)
Query: 120 FVLSMSAS-KDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGS 178
F+ S + S K A A +EV++S +E G V V+WRGKPV++ RR++ ++ S +
Sbjct: 33 FIKSWNPSAKAKAAGAPVEVEISKLEEGQMVRVEWRGKPVWVVRRSQAVVEGLKSHE-NQ 91
Query: 179 LRDPQQDAERVKN----------PEWLVVVGVCTHLGCIP--LPNA 212
LRDP D + N PE+ + VG+CTHLGC P LP++
Sbjct: 92 LRDPNSDELQQPNYAQNPYRSIKPEYFIAVGICTHLGCSPTYLPDS 137
>TIGR_CMR|VC_0573 [details] [associations]
symbol:VC_0573 "ubiquinol--cytochrome c reductase,
iron-sulfur subunit" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0008121 "ubiquinol-cytochrome-c reductase activity"
evidence=ISS] InterPro:IPR005805 InterPro:IPR006317
InterPro:IPR014349 InterPro:IPR017941 InterPro:IPR019470
Pfam:PF00355 Pfam:PF10399 PRINTS:PR00162 PROSITE:PS51296
GO:GO:0016020 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
InterPro:IPR006311 GO:GO:0022900 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 PROSITE:PS51318 GO:GO:0008121 PANTHER:PTHR10134
TIGRFAMs:TIGR01416 KO:K00411 HSSP:P13272 OMA:WRSIKPE
ProtClustDB:CLSK874014 PIR:B82305 RefSeq:NP_230224.1
ProteinModelPortal:Q9KUE8 DNASU:2615250 GeneID:2615250
KEGG:vch:VC0573 PATRIC:20080260 Uniprot:Q9KUE8
Length = 197
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 45/123 (36%), Positives = 71/123 (57%)
Query: 146 GSTVTVKWRGKPVFIRRRTEED-IKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHL 204
G V V R + V ++ E+ ++ NS +L Q +K PE+ + VG+CTHL
Sbjct: 69 GKPVWVVRRSQAVVEGLKSHENQLRDPNSDELQQPNYAQNPYRSIK-PEYFIAVGICTHL 127
Query: 205 GCIP--LPNA------GDFGGWFCPCHGSHYDISGRIRKG-PAPYNLEVPSYSFLDENKM 255
GC P LP++ G G+FCPCHGS +D++GR+ + PAP NL +P + +L + ++
Sbjct: 128 GCSPTYLPDSFSEQVQGVKSGFFCPCHGSKFDMAGRVFQAVPAPLNLVIPPHMYLSDTRI 187
Query: 256 LIG 258
+IG
Sbjct: 188 VIG 190
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 41/106 (38%), Positives = 61/106 (57%)
Query: 120 FVLSMSAS-KDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGS 178
F+ S + S K A A +EV++S +E G V V+WRGKPV++ RR++ ++ S +
Sbjct: 33 FIKSWNPSAKAKAAGAPVEVEISKLEEGQMVRVEWRGKPVWVVRRSQAVVEGLKSHE-NQ 91
Query: 179 LRDPQQDAERVKN----------PEWLVVVGVCTHLGCIP--LPNA 212
LRDP D + N PE+ + VG+CTHLGC P LP++
Sbjct: 92 LRDPNSDELQQPNYAQNPYRSIKPEYFIAVGICTHLGCSPTYLPDS 137
>TAIR|locus:2005534 [details] [associations]
symbol:PETC "photosynthetic electron transfer C"
species:3702 "Arabidopsis thaliana" [GO:0008121
"ubiquinol-cytochrome-c reductase activity" evidence=IEA]
[GO:0009496 "plastoquinol--plastocyanin reductase activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016679
"oxidoreductase activity, acting on diphenols and related
substances as donors" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0010196 "nonphotochemical quenching"
evidence=IMP] [GO:0009512 "cytochrome b6f complex" evidence=TAS]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA;TAS]
[GO:0009767 "photosynthetic electron transport chain" evidence=TAS]
[GO:0046028 "electron transporter, transferring electrons from
cytochrome b6/f complex of photosystem II activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0042742 "defense response to bacterium" evidence=IEP;RCA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0080167 "response to karrikin"
evidence=IEP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0006364 "rRNA
processing" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009409 "response to cold"
evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0009657 "plastid organization" evidence=RCA]
[GO:0009697 "salicylic acid biosynthetic process" evidence=RCA]
[GO:0009814 "defense response, incompatible interaction"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
[GO:0019684 "photosynthesis, light reaction" evidence=RCA]
[GO:0031348 "negative regulation of defense response" evidence=RCA]
[GO:0043900 "regulation of multi-organism process" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR005805 InterPro:IPR014349 InterPro:IPR014909
InterPro:IPR017941 InterPro:IPR023960 Pfam:PF00355 Pfam:PF08802
PRINTS:PR00162 PROSITE:PS51296 GO:GO:0016021 GO:GO:0005886
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0042742
GO:GO:0009941 GO:GO:0080167 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 GO:GO:0009535 GO:GO:0009767 EMBL:AL161496
GO:GO:0010196 EMBL:AC005275 GO:GO:0009512 GO:GO:0045158
GO:GO:0008121 UniGene:At.486 eggNOG:COG0723 EMBL:AJ292972
EMBL:AJ243702 EMBL:AF370566 EMBL:AF410296 EMBL:AY093726
IPI:IPI00530995 IPI:IPI00548912 PIR:F85041 PIR:PA0041
RefSeq:NP_192237.1 RefSeq:NP_849295.1 UniGene:At.67366
ProteinModelPortal:Q9ZR03 SMR:Q9ZR03 IntAct:Q9ZR03 STRING:Q9ZR03
PaxDb:Q9ZR03 PRIDE:Q9ZR03 ProMEX:Q9ZR03 EnsemblPlants:AT4G03280.1
GeneID:827996 KEGG:ath:AT4G03280 GeneFarm:5037 TAIR:At4g03280
HOGENOM:HOG000255192 InParanoid:Q9ZR03 KO:K02636 OMA:GDPTYIV
PhylomeDB:Q9ZR03 ProtClustDB:CLSN2685934 Genevestigator:Q9ZR03
GermOnline:AT4G03280 GO:GO:0046028 GO:GO:0009496 PANTHER:PTHR10134
Uniprot:Q9ZR03
Length = 229
Score = 138 (53.6 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 189 VKNPEWLVVVG---VCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVP 245
V+N + L G VCTHLGC+ N + + CPCHGS Y+ GR+ +GPAP +L +
Sbjct: 142 VENDKTLATYGINAVCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAPLSLAL- 199
Query: 246 SYSFLDE-NKML 256
+++ +DE K+L
Sbjct: 200 AHADIDEAGKVL 211
>TIGR_CMR|GSU_2933 [details] [associations]
symbol:GSU_2933 "cytochrome b/b6 complex, iron-sulfur
subunit" species:243231 "Geobacter sulfurreducens PCA" [GO:0009055
"electron carrier activity" evidence=ISS] InterPro:IPR005805
InterPro:IPR014349 InterPro:IPR017941 Pfam:PF00355 PRINTS:PR00162
PROSITE:PS51296 GO:GO:0016020 GO:GO:0046872 InterPro:IPR006311
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 PROSITE:PS51318 GO:GO:0008121
PANTHER:PTHR10134 RefSeq:NP_953975.1 ProteinModelPortal:Q748R8
GeneID:2688460 KEGG:gsu:GSU2933 PATRIC:22028725
HOGENOM:HOG000255195 OMA:CTVNVTP ProtClustDB:CLSK829013
BioCyc:GSUL243231:GH27-2965-MONOMER Uniprot:Q748R8
Length = 131
Score = 106 (42.4 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 201 CTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPA 238
CTHLGC + CPCHGS +D+ G + KGPA
Sbjct: 76 CTHLGCTVTVTPSEI---VCPCHGSRFDLKGNVAKGPA 110
>TIGR_CMR|BA_0365 [details] [associations]
symbol:BA_0365 "Rieske 2Fe-2S iron-sulfur protein,
putative" species:198094 "Bacillus anthracis str. Ames" [GO:0009055
"electron carrier activity" evidence=ISS] InterPro:IPR005805
InterPro:IPR006076 InterPro:IPR017941 Pfam:PF00355 Pfam:PF01266
PRINTS:PR00162 PROSITE:PS51296 GO:GO:0016020 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0008121 HSSP:P13272
RefSeq:NP_842910.1 RefSeq:YP_016984.1 RefSeq:YP_026630.1
ProteinModelPortal:Q81ZA6 DNASU:1087233
EnsemblBacteria:EBBACT00000012653 EnsemblBacteria:EBBACT00000017697
EnsemblBacteria:EBBACT00000020901 GeneID:1087233 GeneID:2818289
GeneID:2849165 KEGG:ban:BA_0365 KEGG:bar:GBAA_0365 KEGG:bat:BAS0350
HOGENOM:HOG000237013 OMA:WIESTQL ProtClustDB:CLSK915793
BioCyc:BANT260799:GJAJ-392-MONOMER
BioCyc:BANT261594:GJ7F-402-MONOMER Uniprot:Q81ZA6
Length = 508
Score = 119 (46.9 bits), Expect = 0.00010, P = 0.00010
Identities = 28/81 (34%), Positives = 41/81 (50%)
Query: 163 RTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPC 222
R ED+++ + + + A + K + +V CTHLGC N GD W CPC
Sbjct: 425 RKPEDLEVGEG-SVVHVNGKRAGAYKDKEGKLHIVDTTCTHLGCEVEWNNGDCT-WDCPC 482
Query: 223 HGSHYDISGRIRKGPAPYNLE 243
HGS + I G + +GPA L+
Sbjct: 483 HGSRFSIEGDVIEGPADQPLK 503
>TIGR_CMR|GSU_1650 [details] [associations]
symbol:GSU_1650 "cytochrome b/b6 complex, iron-sulfur
subunit" species:243231 "Geobacter sulfurreducens PCA" [GO:0009055
"electron carrier activity" evidence=ISS] InterPro:IPR005805
InterPro:IPR014349 InterPro:IPR017941 Pfam:PF00355 PRINTS:PR00162
PROSITE:PS51296 GO:GO:0016020 GO:GO:0046872 InterPro:IPR006311
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 PROSITE:PS51318
InterPro:IPR019546 TIGRFAMs:TIGR01409 GO:GO:0008121
PANTHER:PTHR10134 HOGENOM:HOG000255195 RefSeq:NP_952701.1
ProteinModelPortal:Q74CM3 GeneID:2687219 KEGG:gsu:GSU1650
PATRIC:22026147 OMA:CTFPWNE ProtClustDB:CLSK828465
BioCyc:GSUL243231:GH27-1635-MONOMER Uniprot:Q74CM3
Length = 139
Score = 97 (39.2 bits), Expect = 0.00068, P = 0.00068
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 195 LVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP 239
+ + VCTHLGCI + + + CPCHG + G + GP P
Sbjct: 78 MALSAVCTHLGCI-VQWEKEKQDFLCPCHGGRFSADGSVLSGPPP 121
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.140 0.438 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 258 216 0.00088 112 3 11 22 0.37 33
32 0.50 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 593 (63 KB)
Total size of DFA: 179 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.71u 0.09s 18.80t Elapsed: 00:00:02
Total cpu time: 18.71u 0.09s 18.80t Elapsed: 00:00:02
Start: Mon May 20 19:17:00 2013 End: Mon May 20 19:17:02 2013