BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025100
(258 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49727|UCRI_MAIZE Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays
PE=2 SV=1
Length = 273
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/276 (72%), Positives = 225/276 (81%), Gaps = 21/276 (7%)
Query: 1 MLRVAARRLLSPSSSSSLRPMAS-SRNIINGAGSSSSSNDDFR----------------S 43
MLRVA RRL SSS S RP A+ +R + GAG +D R S
Sbjct: 1 MLRVAGRRL---SSSLSWRPAAAVARGPLAGAGVPDRDDDSARGRSQPRFSIDSPFFVAS 57
Query: 44 NGFYGSGYLGPQFQ-LPCRGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVL 102
GF + + P+ Q +PATVAAVKNP K+VYDEYNHERYPPGDPSKRAFAYFVL
Sbjct: 58 RGFSSTETVVPRNQDAGLADLPATVAAVKNPNPKVVYDEYNHERYPPGDPSKRAFAYFVL 117
Query: 103 TGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRR 162
+GGRF+YASL+RLL+LKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRR
Sbjct: 118 SGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRR 177
Query: 163 RTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPC 222
RTE+DIKLANSVD+ SLR P+QDAERVKNPEWLVV+GVCTHLGCIPLPNAGDFGGWFCPC
Sbjct: 178 RTEDDIKLANSVDVASLRHPEQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPC 237
Query: 223 HGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
HGSHYDISGRIRKGPAP+NLEVP+YSFL+ENK+L+G
Sbjct: 238 HGSHYDISGRIRKGPAPFNLEVPTYSFLEENKLLVG 273
>sp|P49729|UCRI1_TOBAC Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment)
OS=Nicotiana tabacum PE=2 SV=1
Length = 258
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/196 (93%), Positives = 194/196 (98%)
Query: 63 VPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVL 122
+P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVL
Sbjct: 63 LPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFVL 122
Query: 123 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDP 182
SMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTE+DI LANSVDLGSLRDP
Sbjct: 123 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDP 182
Query: 183 QQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNL 242
QQDAERVKNPEWLVV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNL
Sbjct: 183 QQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNL 242
Query: 243 EVPSYSFLDENKMLIG 258
EVP+YSFL+ENK+LIG
Sbjct: 243 EVPTYSFLEENKLLIG 258
>sp|P51133|UCRI3_TOBAC Cytochrome b-c1 complex subunit Rieske-3, mitochondrial
OS=Nicotiana tabacum PE=2 SV=1
Length = 268
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/221 (85%), Positives = 202/221 (91%), Gaps = 4/221 (1%)
Query: 39 DDFRSNGFYGSGYLGPQFQLP-CRGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAF 97
D FR + S + P Q +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAF
Sbjct: 51 DQFRG---FSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAF 107
Query: 98 AYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKP 157
AYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKP
Sbjct: 108 AYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKP 167
Query: 158 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGG 217
VFIRRRTEEDI LANSVDLGSLRDPQQDAERVKNPEWLVV+GVCTHLGCIPLPNAGDFGG
Sbjct: 168 VFIRRRTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGG 227
Query: 218 WFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
WFCPCHGSHYDISGRIRKGPAPYNLEVP+YSF++ENK+LIG
Sbjct: 228 WFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268
>sp|P51132|UCRI2_TOBAC Cytochrome b-c1 complex subunit Rieske-2, mitochondrial
OS=Nicotiana tabacum PE=2 SV=1
Length = 272
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 182/196 (92%), Positives = 194/196 (98%)
Query: 63 VPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVL 122
+P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVL
Sbjct: 77 LPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVL 136
Query: 123 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDP 182
SMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTE+DI LANSVDLGSLRDP
Sbjct: 137 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDP 196
Query: 183 QQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNL 242
QQDAERVK+PEWLVV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNL
Sbjct: 197 QQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNL 256
Query: 243 EVPSYSFLDENKMLIG 258
EVP+YSFL+ENK+LIG
Sbjct: 257 EVPTYSFLEENKLLIG 272
>sp|P37841|UCRI_SOLTU Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum
tuberosum GN=FES1 PE=1 SV=1
Length = 265
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/213 (87%), Positives = 200/213 (93%), Gaps = 1/213 (0%)
Query: 47 YGSGYLGPQFQLP-CRGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGG 105
+ S + P QL +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGG
Sbjct: 53 FSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGG 112
Query: 106 RFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTE 165
RFVYAS +RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT+
Sbjct: 113 RFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTD 172
Query: 166 EDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGS 225
+DIKLANSVDLG+LRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGS
Sbjct: 173 DDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGS 232
Query: 226 HYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
HYDISGRIRKGPAPYNLEVP+YSFL+ENK+LIG
Sbjct: 233 HYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 265
>sp|P51135|UCRI5_TOBAC Cytochrome b-c1 complex subunit Rieske-5, mitochondrial
OS=Nicotiana tabacum PE=2 SV=1
Length = 268
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/221 (84%), Positives = 202/221 (91%), Gaps = 4/221 (1%)
Query: 39 DDFRSNGFYGSGYLGPQFQLP-CRGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAF 97
D FR + S + P Q +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAF
Sbjct: 51 DQFRG---FSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAF 107
Query: 98 AYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKP 157
AYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKP
Sbjct: 108 AYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKP 167
Query: 158 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGG 217
VFIRRRT+EDI LANSVDLGSLRDPQQDAERVKNPEWLVV+GVCTHLGCIPLPNAGDFGG
Sbjct: 168 VFIRRRTDEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGG 227
Query: 218 WFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
WFCPCHGSHYDISGRIRKGPAPYNLEVP+YSF++ENK+LIG
Sbjct: 228 WFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268
>sp|P51134|UCRI4_TOBAC Cytochrome b-c1 complex subunit Rieske-4, mitochondrial
OS=Nicotiana tabacum PE=2 SV=1
Length = 236
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/196 (92%), Positives = 194/196 (98%)
Query: 63 VPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVL 122
+P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVL
Sbjct: 41 LPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVL 100
Query: 123 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDP 182
SMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTE+DI LANSVDLGSLRDP
Sbjct: 101 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDP 160
Query: 183 QQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNL 242
QQDAERVK+PEWLVV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNL
Sbjct: 161 QQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNL 220
Query: 243 EVPSYSFLDENKMLIG 258
EVP+YSFL+ENK+LIG
Sbjct: 221 EVPTYSFLEENKLLIG 236
>sp|P07056|UCRI_NEUCR Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=NCU06606 PE=3 SV=1
Length = 231
Score = 224 bits (571), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 128/162 (79%)
Query: 97 FAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGK 156
F+YF++ + A+ + I +F+ +MSAS DVLAMA +EVDL++I G V +KWRGK
Sbjct: 70 FSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVLAMAKVEVDLNAIPEGKNVIIKWRGK 129
Query: 157 PVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFG 216
PVFIR RT +I+ AN V++ +LRDP+ DA+RVK PEWLV++GVCTHLGC+P+ AGD+G
Sbjct: 130 PVFIRHRTPAEIEEANKVNVATLRDPETDADRVKKPEWLVMLGVCTHLGCVPIGEAGDYG 189
Query: 217 GWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GWFCPCHGSHYDISGRIRKGPAP NLE+P Y F +E K++IG
Sbjct: 190 GWFCPCHGSHYDISGRIRKGPAPLNLEIPLYEFPEEGKLVIG 231
>sp|P08067|UCRI_YEAST Cytochrome b-c1 complex subunit Rieske, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RIP1 PE=1 SV=1
Length = 215
Score = 221 bits (564), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 95/164 (57%), Positives = 132/164 (80%), Gaps = 1/164 (0%)
Query: 95 RAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWR 154
R++AYF++ + ++ + + F+ SM+A+ DVLAMA +EV+L++I G V VKW+
Sbjct: 53 RSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQ 112
Query: 155 GKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGD 214
GKPVFIR RT +I+ ANSVD+ +L+DPQ DA+RVK+P+WL+++G+CTHLGC+P+ AGD
Sbjct: 113 GKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVPIGEAGD 172
Query: 215 FGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
FGGWFCPCHGSHYDISGRIRKGPAP NLE+P+Y F D +K+++G
Sbjct: 173 FGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEF-DGDKVIVG 215
>sp|Q69BJ7|UCRI_SAISC Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Saimiri
sciureus GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 214 bits (544), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 124/166 (74%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y V + ++ +F+ SMSAS DVLAM+ +E+ LS I G + K
Sbjct: 109 ARKVFSYMVTATTAVGVTYAAKSIVTQFISSMSASADVLAMSKIEIKLSDIPEGKNMAFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWMILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIRKGPAP NLEVP+Y FL ++ +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPTYEFLSDDMVVVG 274
>sp|Q5ZLR5|UCRI_CHICK Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gallus
gallus GN=UQCRFS1 PE=1 SV=1
Length = 272
Score = 213 bits (542), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 133/202 (65%), Gaps = 7/202 (3%)
Query: 64 PATVAAVKNPTSKIVYDEYNHERYPPGDPS-------KRAFAYFVLTGGRFVYASLIRLL 116
PA+V V N + + Y E S ++ F+Y V A + +
Sbjct: 71 PASVRYVHNDVTVPDFSAYRREDVMDATTSSQTSSEDRKGFSYLVTATACVATAYAAKNV 130
Query: 117 ILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDL 176
+ +F+ S+SAS DVLA++ +E+ LS I G V KWRGKP+F+R RT+ +I VD+
Sbjct: 131 VTQFISSLSASADVLALSKIEIKLSDIPEGKNVAFKWRGKPLFVRHRTQAEINQEAEVDV 190
Query: 177 GSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKG 236
LRDPQ D +RVK PEW+++VGVCTHLGC+P+ N+GDFGG++CPCHGSHYD SGRIRKG
Sbjct: 191 SKLRDPQHDLDRVKKPEWVILVGVCTHLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKG 250
Query: 237 PAPYNLEVPSYSFLDENKMLIG 258
PAPYNLEVP+Y F+ ++ +++G
Sbjct: 251 PAPYNLEVPTYQFVGDDLVVVG 272
>sp|Q09154|UCRI_SCHPO Cytochrome b-c1 complex subunit Rieske, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rip1 PE=2 SV=2
Length = 228
Score = 213 bits (541), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 132/179 (73%), Gaps = 2/179 (1%)
Query: 80 DEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVD 139
D ++ GD S R +Y ++ + A+ + + F+ S SAS DVLAM+ EVD
Sbjct: 52 DFSEYQTKSTGDRS-RVISYAMVGTMGALTAAGAQATVHDFLASWSASADVLAMSKAEVD 110
Query: 140 LSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVG 199
LS I G + VKW+GKPVFIR RT E+I+ ANSVD+ +LRDPQ D++RV+ PEWLV++G
Sbjct: 111 LSKIPEGKNLVVKWQGKPVFIRHRTPEEIQEANSVDISTLRDPQADSDRVQKPEWLVMIG 170
Query: 200 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
VCTHLGC+P+ AGD+GGWFCPCHGSHYDISGRIR+GPAP NL +P+Y+F + +K++IG
Sbjct: 171 VCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRRGPAPLNLAIPAYTF-EGSKIIIG 228
>sp|Q69BJ8|UCRI_LAGLA Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Lagothrix
lagotricha GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 213 bits (541), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 123/166 (74%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y V + ++ +FV SMSAS DVLAM+ +E+ LS I G + K
Sbjct: 109 ARKGFSYLVTAATAVGVTYAAKSIVTQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWMILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIRKGPAP NLEVP+Y F ++ +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPTYEFTGDDMVIVG 274
>sp|Q69BJ9|UCRI_AOTAZ Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Aotus
azarae GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 212 bits (540), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 123/166 (74%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y V + ++ +FV SMSAS DVLAM+ +E+ LS I G + K
Sbjct: 109 ARKGFSYLVTATTAVGVTYAAKSIVTQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWMILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIRKGPAP NLEVP+Y F ++ +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPTYEFTSDDLVIVG 274
>sp|P13272|UCRI_BOVIN Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Bos taurus
GN=UQCRFS1 PE=1 SV=3
Length = 274
Score = 212 bits (539), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 123/166 (74%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y V A + ++ +FV SMSAS DVLAM+ +E+ LS I G + K
Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I +V++ LRDPQ D ERVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIRKGPAP NLEVPSY F ++ +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPSYEFTSDDMVIVG 274
>sp|Q69BK0|UCRI_COLPO Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Colobus
polykomos GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 210 bits (535), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 123/166 (74%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
++++F+Y V A + + +FV SMSAS DVLAMA +EV LS I G + K
Sbjct: 109 ARKSFSYMVTAVTTVGVAYAAKNAVTQFVSSMSASADVLAMAKIEVKLSDIPEGKNMAFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIR GPAP NLEVP+Y F ++ +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVVVG 274
>sp|Q69BK2|UCRI_THEGE Cytochrome b-c1 complex subunit Rieske, mitochondrial
OS=Theropithecus gelada GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 209 bits (533), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 137/205 (66%), Gaps = 11/205 (5%)
Query: 63 VPATVAAVKNPTSKIVYDEYNHERYPPGDPSK---------RAFAYFVLTGGRFVYASLI 113
VPA+V + T V D Y++ R D +K + F+Y V A
Sbjct: 72 VPASVC--YSHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAA 129
Query: 114 RLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANS 173
+ + +F+ SMSAS DVLAMA +E++LS I G + KWRGKP+F+R RT+++I+ +
Sbjct: 130 KNAVTQFISSMSASADVLAMAKIEINLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAA 189
Query: 174 VDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRI 233
V+L LRDPQ D +RVK PEW++++G+CTHLGC+P+ NAGDFGG++CPCHGSHYD+SGRI
Sbjct: 190 VELSQLRDPQHDLDRVKKPEWVILIGICTHLGCVPIANAGDFGGYYCPCHGSHYDVSGRI 249
Query: 234 RKGPAPYNLEVPSYSFLDENKMLIG 258
R GPAP NLEVP Y F ++ +++G
Sbjct: 250 RLGPAPLNLEVPPYEFTSDDMVVVG 274
>sp|Q69BK3|UCRI_PONPY Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pongo
pygmaeus GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 123/166 (74%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y V A + ++ +FV SMSAS DVLA+A +E+ LS I G +T K
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNVVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMTFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIR GPAP NLEVP Y F ++ +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPIYEFTSDDMVIVG 274
>sp|Q9CR68|UCRI_MOUSE Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Mus
musculus GN=Uqcrfs1 PE=1 SV=1
Length = 274
Score = 208 bits (530), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 123/166 (74%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y V A + ++ +FV SMSAS DVLAM+ +E+ LS I G + K
Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I +V++ LRDPQ D +RVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIRKGPAP NLEVP+Y F ++ +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPAYEFTSDDVVVVG 274
>sp|Q69BJ6|UCRI_HYLSY Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Hylobates
syndactylus GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 208 bits (530), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 122/166 (73%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + K
Sbjct: 109 ARKGFSYLVTAVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKRPEWVILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIR GPAP NLEVP+Y F ++ +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
>sp|P20788|UCRI_RAT Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus
norvegicus GN=Uqcrfs1 PE=1 SV=2
Length = 274
Score = 208 bits (529), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 121/166 (72%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y V A + + +FV SMSAS DVLAM+ +E+ LS I G + K
Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNAVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I +V++ LRDPQ D ERVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIRKGPAP NLEVP+Y F + +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPTYEFTSGDVVVVG 274
>sp|Q69BK1|UCRI_CHLAE Cytochrome b-c1 complex subunit Rieske, mitochondrial
OS=Chlorocebus aethiops GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 208 bits (529), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 137/205 (66%), Gaps = 11/205 (5%)
Query: 63 VPATVAAVKNPTSKIVYDEYNHERYPPGDPSK---------RAFAYFVLTGGRFVYASLI 113
VPA+V + T V D Y++ R D +K + F+Y V A
Sbjct: 72 VPASVC--YSHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAA 129
Query: 114 RLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANS 173
+ ++ +F+ SMSAS DVLAMA +E++LS I G + KWRGKP+F+R RT+++I+ +
Sbjct: 130 KNVVTQFISSMSASADVLAMAKIEINLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEEEAA 189
Query: 174 VDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRI 233
V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD SGRI
Sbjct: 190 VELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRI 249
Query: 234 RKGPAPYNLEVPSYSFLDENKMLIG 258
R GPAP NLEVP Y F ++ +++G
Sbjct: 250 RLGPAPLNLEVPPYEFTGDDVVVVG 274
>sp|P47985|UCRI_HUMAN Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Homo
sapiens GN=UQCRFS1 PE=1 SV=2
Length = 274
Score = 207 bits (528), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 122/166 (73%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + K
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIR GPAP NLEVP+Y F ++ +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
>sp|Q69BK4|UCRI_GORGO Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gorilla
gorilla gorilla GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 207 bits (528), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 122/166 (73%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + K
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIR GPAP NLEVP+Y F ++ +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
>sp|Q69BK5|UCRI_PANTR Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan
troglodytes GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 207 bits (528), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 122/166 (73%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + K
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIR GPAP NLEVP+Y F ++ +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
>sp|Q69BK6|UCRI_PANPA Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan
paniscus GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 207 bits (528), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 122/166 (73%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + K
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFK 168
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NA
Sbjct: 169 WRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANA 228
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIR GPAP NLEVP+Y F ++ +++G
Sbjct: 229 GDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
>sp|P0C7P4|UCRIL_HUMAN Putative cytochrome b-c1 complex subunit Rieske-like protein 1
OS=Homo sapiens GN=UQCRFS1P1 PE=5 SV=1
Length = 283
Score = 206 bits (525), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 121/166 (72%)
Query: 93 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVK 152
+++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + K
Sbjct: 118 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFK 177
Query: 153 WRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA 212
WRGKP+F+R RT+++IK +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NA
Sbjct: 178 WRGKPLFVRHRTQKEIKQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANA 237
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GDFGG++CPCHGSHYD SGRIR GPA NLEVP+Y F ++ +++G
Sbjct: 238 GDFGGYYCPCHGSHYDASGRIRLGPATLNLEVPTYEFTSDDMVIVG 283
>sp|P23136|UCRI_RHORU Ubiquinol-cytochrome c reductase iron-sulfur subunit
OS=Rhodospirillum rubrum GN=petA PE=1 SV=2
Length = 183
Score = 200 bits (509), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 122/183 (66%), Gaps = 7/183 (3%)
Query: 81 EYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDL 140
E H PG S R F++ G V A + L + F+ M+ + D LA+AS EVD+
Sbjct: 3 EAEHTASTPGGESSRR--DFLIYGTTAVGAVGVALAVWPFIDFMNPAADTLALASTEVDV 60
Query: 141 SSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGV 200
S+I G +TV WRGKPVF+R RT+++I +A +VD SLRDPQ D RV+ +WLV+VGV
Sbjct: 61 SAIAEGQAITVTWRGKPVFVRHRTQKEIVVARAVDPASLRDPQTDEARVQQAQWLVMVGV 120
Query: 201 CTHLGCIPLPN-----AGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKM 255
CTHLGCIPL GDF GWFCPCHGSHYD +GRIRKGPAP NL VP Y+F D+ +
Sbjct: 121 CTHLGCIPLGQKAGDPKGDFDGWFCPCHGSHYDSAGRIRKGPAPLNLPVPPYAFTDDTTV 180
Query: 256 LIG 258
LIG
Sbjct: 181 LIG 183
>sp|Q1RIA5|UCRI_RICBR Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia
bellii (strain RML369-C) GN=petA PE=3 SV=1
Length = 186
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 119/181 (65%), Gaps = 2/181 (1%)
Query: 80 DEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVD 139
D N + D SK + F++ V A + + S++ S DVLA++S+EVD
Sbjct: 6 DTNNDNKVEFEDRSKTSRRDFMVLTASSVAAVGAACTLWPLINSLNPSADVLALSSIEVD 65
Query: 140 LSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVV 197
LS+I G TVTVKW+GKPVFI RT + I A +V + L DP++D +RVK + WLV
Sbjct: 66 LSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEEDQDRVKAGHDNWLVT 125
Query: 198 VGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLI 257
+G+CTHLGC+PL N GD+ GWFCPCHGS YD SGR+R+GPAP NL VP Y+F+ + K+ I
Sbjct: 126 IGICTHLGCVPLANQGDYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTFISDKKIRI 185
Query: 258 G 258
G
Sbjct: 186 G 186
>sp|D5ANZ2|UCRI_RHOCB Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter
capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
GN=petA PE=3 SV=1
Length = 191
Score = 181 bits (459), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/188 (50%), Positives = 123/188 (65%), Gaps = 28/188 (14%)
Query: 93 SKRAFAYFVLTG-GRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTV 151
++R F Y G V + + LI + M+AS DV AMAS+ VD+S++E G+ +TV
Sbjct: 10 TRRDFLYHATAATGVVVTGAAVWPLINQ----MNASADVKAMASIFVDVSAVEVGTQLTV 65
Query: 152 KWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNP------------------- 192
KWRGKPVFIRRR E+DI+LA SV LG+LRD AE P
Sbjct: 66 KWRGKPVFIRRRDEKDIELARSVPLGALRDTS--AENANKPGAEATDENRTLPAFDGTNT 123
Query: 193 -EWLVVVGVCTHLGCIPLPN-AGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFL 250
EWLV++GVCTHLGC+P+ + +GDFGGWFCPCHGSHYD +GRIRKGPAP NL++P +F+
Sbjct: 124 GEWLVMLGVCTHLGCVPMGDKSGDFGGWFCPCHGSHYDSAGRIRKGPAPRNLDIPVAAFV 183
Query: 251 DENKMLIG 258
DE + +G
Sbjct: 184 DETTIKLG 191
>sp|P0CY48|UCRI_RHOCA Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter
capsulatus GN=petA PE=1 SV=1
Length = 191
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 123/188 (65%), Gaps = 28/188 (14%)
Query: 93 SKRAFAYFVLTG-GRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTV 151
++R F Y G V + + LI + M+AS DV AM+S+ VD+S++E G+ +TV
Sbjct: 10 TRRDFLYHATAATGVVVTGAAVWPLINQ----MNASADVKAMSSIFVDVSAVEVGTQLTV 65
Query: 152 KWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNP------------------- 192
KWRGKPVFIRRR E+DI+LA SV LG+LRD AE P
Sbjct: 66 KWRGKPVFIRRRDEKDIELARSVPLGALRDTS--AENANKPGAEATDENRSLAAFDGTNT 123
Query: 193 -EWLVVVGVCTHLGCIPLPN-AGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFL 250
EWLV++GVCTHLGC+P+ + +GDFGGWFCPCHGSHYD +GRIRKGPAP NL++P +F+
Sbjct: 124 GEWLVMLGVCTHLGCVPMGDKSGDFGGWFCPCHGSHYDSAGRIRKGPAPRNLDIPVAAFV 183
Query: 251 DENKMLIG 258
DE + +G
Sbjct: 184 DETTIKLG 191
>sp|Q4UKR6|UCRI_RICFE Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia
felis (strain ATCC VR-1525 / URRWXCal2) GN=petA PE=3
SV=1
Length = 177
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 110/162 (67%), Gaps = 3/162 (1%)
Query: 99 YFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPV 158
+ VLT + L V S++ S DVLA++S+EVDLS+I G TVTVKW+GKPV
Sbjct: 17 FMVLTASSVAAVGAVCTL-WPLVDSLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPV 75
Query: 159 FIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFG 216
FI RT + I A +V + L DP+ D RVK + WLV +G+CTHLGC+PL N G++
Sbjct: 76 FITNRTPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGICTHLGCVPLANQGEYD 135
Query: 217 GWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GWFCPCHGS YD SGR+R+GPAP NL VP Y+F+ + K+ IG
Sbjct: 136 GWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTFISDKKIRIG 177
>sp|Q92IR2|UCRI_RICCN Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=petA PE=3
SV=1
Length = 177
Score = 179 bits (454), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 110/162 (67%), Gaps = 3/162 (1%)
Query: 99 YFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPV 158
+ VLT + L V S++ S DVLA++S+EVDLS+I G TVTVKW+GKPV
Sbjct: 17 FMVLTASSVAAIGAVCTL-WPLVDSLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPV 75
Query: 159 FIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFG 216
FI RT + I A +V + L DP+ D RVK + WLV +G+CTHLGC+PL N G++
Sbjct: 76 FITNRTPDKIAEARAVKMSELIDPEADQARVKAGHDNWLVTIGICTHLGCVPLANQGEYD 135
Query: 217 GWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
GWFCPCHGS YD SGR+R+GPAP NL VP Y+F+ + K+ IG
Sbjct: 136 GWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTFISDKKIRIG 177
>sp|P05417|UCRI_PARDE Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Paracoccus
denitrificans GN=petA PE=1 SV=1
Length = 190
Score = 177 bits (450), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 106/153 (69%), Gaps = 14/153 (9%)
Query: 120 FVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSL 179
V M+ S DV A+AS++VD+S +E G+ +TVKW GKPVFIRRRTE++I+ VDLG L
Sbjct: 38 LVNQMNPSADVQALASIQVDVSGVETGTQLTVKWLGKPVFIRRRTEDEIQAGREVDLGQL 97
Query: 180 RD-----------PQQDAERVKNP--EWLVVVGVCTHLGCIPLPN-AGDFGGWFCPCHGS 225
D P D R + EWLV++GVCTHLGC+P+ + AGDFGGWFCPCHGS
Sbjct: 98 IDRSAQNSNKPDAPATDENRTMDEAGEWLVMIGVCTHLGCVPIGDGAGDFGGWFCPCHGS 157
Query: 226 HYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
HYD SGRIR+GPAP NL +P FLD+ + +G
Sbjct: 158 HYDTSGRIRRGPAPQNLHIPVAEFLDDTTIKLG 190
>sp|Q9ZDQ5|UCRI_RICPR Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia
prowazekii (strain Madrid E) GN=petA PE=3 SV=1
Length = 177
Score = 176 bits (445), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 104/141 (73%), Gaps = 2/141 (1%)
Query: 120 FVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSL 179
+ S + S DVLA++S+EVDLS+I G TVTVKW+GKP+FI RT ++I A +V + L
Sbjct: 37 IIDSFNPSADVLALSSIEVDLSNIAIGQTVTVKWQGKPIFITNRTHDEIAAARAVKMSEL 96
Query: 180 RDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGP 237
DP++D RVK + WLV +G+CTHLGC+PL + G++ GWFCPCHGS YD SGR+RKGP
Sbjct: 97 IDPERDEVRVKAGHDNWLVTIGICTHLGCVPLSHKGEYNGWFCPCHGSQYDSSGRVRKGP 156
Query: 238 APYNLEVPSYSFLDENKMLIG 258
AP NL VP Y F+ + K+ IG
Sbjct: 157 APLNLAVPPYIFISDKKIRIG 177
>sp|Q68XA0|UCRI_RICTY Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia
typhi (strain ATCC VR-144 / Wilmington) GN=petA PE=3
SV=1
Length = 177
Score = 174 bits (441), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 80/141 (56%), Positives = 103/141 (73%), Gaps = 2/141 (1%)
Query: 120 FVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSL 179
+ S++ S DVLA++S+EVDLSSI G TVTVKW+GKP+FI RT + I A +V + L
Sbjct: 37 IIDSLNPSTDVLALSSIEVDLSSIAIGQTVTVKWQGKPIFITNRTPDGIASARAVKMSEL 96
Query: 180 RDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGP 237
DP++D RVK + WLV +G+CTHLGC+PL N G++ GWFCPCHGS YD SGR+RKGP
Sbjct: 97 IDPEKDEVRVKAGHDNWLVTIGICTHLGCVPLSNQGEYNGWFCPCHGSQYDSSGRVRKGP 156
Query: 238 APYNLEVPSYSFLDENKMLIG 258
A NL VP Y F+ + K+ IG
Sbjct: 157 ASLNLVVPPYIFISDTKIRIG 177
>sp|P81380|UCRI_RHOVI Ubiquinol-cytochrome c reductase iron-sulfur subunit
OS=Rhodopseudomonas viridis GN=petA PE=3 SV=2
Length = 179
Score = 167 bits (422), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 98/142 (69%), Gaps = 3/142 (2%)
Query: 120 FVLSMSASKDVLAM-ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGS 178
F+ M+ +A A +++D+S + G V V WRGKP+FIR RT ++I+ + D+G+
Sbjct: 34 FITQMNPDAATIAAGAPIDIDISPVTEGQIVRVFWRGKPIFIRHRTAKEIQSEEAADVGA 93
Query: 179 LRDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKG 236
L DPQ D+ RVK EWLVV CTHLGCIPL + GD+GGWFCPCHGS YD SGR+RKG
Sbjct: 94 LIDPQPDSARVKPGKAEWLVVYASCTHLGCIPLGHQGDWGGWFCPCHGSQYDASGRVRKG 153
Query: 237 PAPYNLEVPSYSFLDENKMLIG 258
PAP NL VP Y F+D K+ IG
Sbjct: 154 PAPTNLPVPPYEFVDNTKIRIG 175
>sp|Q02762|UCRI_RHOSH Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter
sphaeroides GN=petA PE=1 SV=1
Length = 187
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 103/154 (66%), Gaps = 15/154 (9%)
Query: 120 FVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSL 179
+ M+ S DV A+AS+ VD+SS+EPG +TVK+ GKP+FIRRRTE DI+L SV LG L
Sbjct: 34 LINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQL 93
Query: 180 RDPQ------------QDAERVKNP--EWLVVVGVCTHLGCIPLPN-AGDFGGWFCPCHG 224
D D R + EWLV+ GVCTHLGC+P+ +GDFGGWFCPCHG
Sbjct: 94 VDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHG 153
Query: 225 SHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 258
SHYD +GRIRKGPAP NL +P F+DE + +G
Sbjct: 154 SHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
>sp|P51130|UCRI_BRAJA Ubiquinol-cytochrome c reductase iron-sulfur subunit
OS=Bradyrhizobium japonicum (strain USDA 110) GN=petA
PE=2 SV=1
Length = 176
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 99/142 (69%), Gaps = 3/142 (2%)
Query: 120 FVLSMSASKDVLAM-ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGS 178
F+ M+ +A A +EVDLS I G + V WRGKP++I RT++ I A +V++ S
Sbjct: 35 FISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHRTKKQIDEARAVNVAS 94
Query: 179 LRDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKG 236
L DPQ D RVK + +WLVV+G+CTHLGCIP+ + G++ G+FCPCHGS YD SGRIR+G
Sbjct: 95 LPDPQSDEARVKSGHEQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQG 154
Query: 237 PAPYNLEVPSYSFLDENKMLIG 258
PAP NL VP Y F+ + K+ IG
Sbjct: 155 PAPANLPVPPYQFVSDTKIQIG 176
>sp|O31214|UCRI_ALLVD Ubiquinol-cytochrome c reductase iron-sulfur subunit
OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 /
NBRC 103801 / D) GN=petA PE=3 SV=2
Length = 207
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 96/163 (58%), Gaps = 22/163 (13%)
Query: 117 ILKFVLSMSASKDVLAM-ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVD 175
++ FV SM+ S A A +E D+S +EPG+ + VKWRGKPV++ R+ E + +S D
Sbjct: 40 LVPFVASMNPSARARAAGAPVEADISKLEPGALLRVKWRGKPVWVVHRSPEMLAALSSND 99
Query: 176 LGSLRDPQ----QDAERVKN------PEWLVVVGVCTHLGCIPL--PNAG------DF-G 216
L DP Q + KN PE+LV +G+CTHLGC P P G D+ G
Sbjct: 100 -PKLVDPTSEVPQQPDYCKNPTRSIKPEYLVAIGICTHLGCSPTYRPEFGPDDLGSDWKG 158
Query: 217 GWFCPCHGSHYDISGRIRKG-PAPYNLEVPSYSFLDENKMLIG 258
G+ CPCHGS +D++ R+ K PAP NL +P + +L++ +LIG
Sbjct: 159 GFHCPCHGSRFDLAARVFKNVPAPTNLVIPKHVYLNDTTILIG 201
>sp|P26290|UCRIB_SYNY3 Cytochrome b6-f complex iron-sulfur subunit 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=petC2 PE=3 SV=2
Length = 180
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 18/105 (17%)
Query: 170 LANSVDLGSLRDPQQDAERV------KNPEWLVVVG-----------VCTHLGCIPLPNA 212
L N V + +RV +P ++VV G VCTHLGC+ NA
Sbjct: 60 LGNDVKVTEFLASHNAGDRVLAQGLKGDPTYIVVQGDDTIANYGINAVCTHLGCVVPWNA 119
Query: 213 GDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLI 257
+ + CPCHGS Y+ G++ +GPAP +L + + D++K+++
Sbjct: 120 SE-NKFMCPCHGSQYNAEGKVVRGPAPLSLALAHATVTDDDKLVL 163
>sp|Q3AWL7|UCRI_SYNS9 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain CC9902) GN=petC PE=3 SV=1
Length = 178
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 16/87 (18%)
Query: 182 PQQDAERVK----NPEWLVVVG-----------VCTHLGCIPLPNAGDFGGWFCPCHGSH 226
P+ D V+ +P +L+V G +CTHLGC+ N+G + CPCHGS
Sbjct: 73 PEGDRSLVQGLKGDPTYLIVEGADAIGSYGINAICTHLGCVVPWNSGA-NKFMCPCHGSQ 131
Query: 227 YDISGRIRKGPAPYNLEVPSYSFLDEN 253
YD +G++ +GPAP +L + + S D+N
Sbjct: 132 YDATGKVVRGPAPLSLALANVSVEDDN 158
>sp|P83794|UCRI_MASLA Cytochrome b6-f complex iron-sulfur subunit OS=Mastigocladus
laminosus GN=petC PE=1 SV=2
Length = 179
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 18/105 (17%)
Query: 169 KLANSVDLGSLRDPQQDAERV------KNPEWLVVV-----------GVCTHLGCIPLPN 211
KL N+V + + +RV +P ++VV VCTHLGC+ N
Sbjct: 59 KLGNNVKVSKFLESHNAGDRVLVQGLKGDPTYIVVESKEAIRDYGINAVCTHLGCVVPWN 118
Query: 212 AGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKML 256
A + + CPCHGS YD +G++ +GPAP +L + + D+N +L
Sbjct: 119 AAE-NKFKCPCHGSQYDETGKVIRGPAPLSLALCHATVQDDNIVL 162
>sp|Q46GW1|UCRI_PROMT Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain NATL2A) GN=petC PE=3 SV=1
Length = 178
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 12/77 (15%)
Query: 191 NPEWLVVVG-----------VCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP 239
+P +L+V G +CTHLGC+ N+G + CPCHGS YD +G++ +GPAP
Sbjct: 86 DPTYLIVEGEDAITSYGINAICTHLGCVVPWNSG-ANKYMCPCHGSQYDSTGKVVRGPAP 144
Query: 240 YNLEVPSYSFLDENKML 256
+L + S D+ ++
Sbjct: 145 LSLAIAHVSIEDDQVLV 161
>sp|A2C0R9|UCRI_PROM1 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain NATL1A) GN=petC PE=3 SV=1
Length = 178
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 12/77 (15%)
Query: 191 NPEWLVVVG-----------VCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP 239
+P +L+V G +CTHLGC+ N+G + CPCHGS YD +G++ +GPAP
Sbjct: 86 DPTYLIVEGEDAITSYGINAICTHLGCVVPWNSG-ANKYMCPCHGSQYDSTGKVVRGPAP 144
Query: 240 YNLEVPSYSFLDENKML 256
+L + S D+ ++
Sbjct: 145 LSLAIAHVSIEDDQVLV 161
>sp|Q0I872|UCRI_SYNS3 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain CC9311) GN=petC PE=3 SV=1
Length = 178
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 18/107 (16%)
Query: 164 TEEDIKLANSVDLGSLRDPQQDAERV------KNPEWLVVVGV-----------CTHLGC 206
T +L NSV + +R +P +L+V GV CTHLGC
Sbjct: 53 TSAKDELGNSVTASGWLSSHAEGDRSLVQGLKGDPTYLIVEGVDAIGSYGINAICTHLGC 112
Query: 207 IPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDEN 253
+ N+G + CPCHGS YD +G++ +GPAP +L + + S ++N
Sbjct: 113 VVPWNSGA-NKFMCPCHGSQYDATGKVVRGPAPLSLALANVSVDNDN 158
>sp|Q5CC93|UCRIA_CYAPA Cytochrome b6-f complex iron-sulfur subunit 1, cyanelle
OS=Cyanophora paradoxa GN=petC-1 PE=2 SV=1
Length = 239
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 200 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDE 252
VCTHLGC+ NA + + CPCHGS YD +G++ +GPAP +L + S L++
Sbjct: 166 VCTHLGCVVPWNASE-NKFMCPCHGSQYDRTGKVVRGPAPLSLALAHVSVLED 217
>sp|Q5CC92|UCRIB_CYAPA Cytochrome b6-f complex iron-sulfur subunit 2, cyanelle
OS=Cyanophora paradoxa GN=petC-2 PE=2 SV=1
Length = 241
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 200 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDE 252
VCTHLGC+ +P G + CPCHGS YD +G++ +GPAP +L + + L++
Sbjct: 168 VCTHLGCV-VPWNQSEGKFMCPCHGSQYDRTGKVVRGPAPLSLALAHVNVLED 219
>sp|Q7VDC0|UCRI_PROMA Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain SARG / CCMP1375 / SS120) GN=petC PE=3
SV=1
Length = 178
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 12/77 (15%)
Query: 191 NPEWLVVVG-----------VCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAP 239
+P +L+V G +CTHLGC+ N+G + CPCHGS YD +G++ +GPAP
Sbjct: 86 DPTYLIVDGDAAIGNFGINAICTHLGCVVPWNSG-ANKYICPCHGSQYDANGKVVRGPAP 144
Query: 240 YNLEVPSYSFLDENKML 256
+L + D+N ++
Sbjct: 145 LSLALTHIDIDDDNVLV 161
>sp|Q5N5B0|UCRI_SYNP6 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petC
PE=3 SV=1
Length = 179
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 200 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKML 256
VCTHLGC+ NA + + CPCHGS YD +G++ +GPAP +L + S D+ L
Sbjct: 107 VCTHLGCVVPWNASE-NKFKCPCHGSQYDATGKVVRGPAPLSLALAHVSVTDDKVFL 162
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,770,668
Number of Sequences: 539616
Number of extensions: 4269994
Number of successful extensions: 12369
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 12188
Number of HSP's gapped (non-prelim): 119
length of query: 258
length of database: 191,569,459
effective HSP length: 115
effective length of query: 143
effective length of database: 129,513,619
effective search space: 18520447517
effective search space used: 18520447517
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)