Query 025101
Match_columns 258
No_of_seqs 135 out of 1577
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 02:42:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025101.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025101hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 1.5E-42 3.3E-47 279.3 21.3 239 2-257 92-338 (339)
2 KOG0024 Sorbitol dehydrogenase 100.0 2.7E-40 5.8E-45 259.0 21.9 248 2-258 95-354 (354)
3 KOG0022 Alcohol dehydrogenase, 100.0 3.7E-40 7.9E-45 256.6 22.4 250 4-256 126-375 (375)
4 COG1062 AdhC Zn-dependent alco 100.0 7.4E-40 1.6E-44 258.7 21.6 249 2-256 89-366 (366)
5 COG0604 Qor NADPH:quinone redu 100.0 3.1E-39 6.7E-44 265.7 22.2 243 3-256 73-326 (326)
6 cd08281 liver_ADH_like1 Zinc-d 100.0 1E-37 2.3E-42 263.4 25.3 226 24-253 144-369 (371)
7 TIGR03451 mycoS_dep_FDH mycoth 100.0 2E-37 4.2E-42 260.6 24.4 229 23-255 128-357 (358)
8 KOG1197 Predicted quinone oxid 100.0 1.3E-37 2.8E-42 235.6 17.8 244 3-257 80-331 (336)
9 TIGR02818 adh_III_F_hyde S-(hy 100.0 1.9E-36 4.2E-41 255.2 24.6 232 23-256 137-368 (368)
10 PLN02740 Alcohol dehydrogenase 100.0 3.5E-36 7.5E-41 254.8 24.7 232 23-256 150-381 (381)
11 PLN02827 Alcohol dehydrogenase 100.0 1.7E-35 3.8E-40 250.0 25.8 231 24-257 146-377 (378)
12 cd08239 THR_DH_like L-threonin 100.0 1E-35 2.2E-40 248.6 23.6 223 23-256 116-339 (339)
13 cd08300 alcohol_DH_class_III c 100.0 1.7E-35 3.6E-40 249.7 24.8 231 23-255 138-368 (368)
14 PRK09880 L-idonate 5-dehydroge 100.0 1.3E-35 2.9E-40 248.1 23.3 240 2-256 91-343 (343)
15 cd08301 alcohol_DH_plants Plan 100.0 3.6E-35 7.7E-40 247.9 25.1 228 24-254 140-368 (369)
16 cd08277 liver_alcohol_DH_like 100.0 1.8E-34 3.8E-39 243.2 24.6 229 23-255 136-365 (365)
17 KOG0023 Alcohol dehydrogenase, 100.0 4.7E-35 1E-39 229.1 19.3 240 2-257 100-355 (360)
18 PRK10309 galactitol-1-phosphat 100.0 4.5E-34 9.8E-39 239.3 24.7 228 23-257 114-347 (347)
19 COG1063 Tdh Threonine dehydrog 100.0 3.8E-34 8.2E-39 238.5 24.0 246 2-256 88-350 (350)
20 PLN03154 putative allyl alcoho 100.0 6.1E-34 1.3E-38 238.1 23.0 243 3-257 90-346 (348)
21 TIGR03201 dearomat_had 6-hydro 100.0 1.1E-33 2.4E-38 237.0 23.2 245 2-256 86-349 (349)
22 TIGR03366 HpnZ_proposed putati 100.0 9.8E-34 2.1E-38 230.4 20.8 225 2-237 38-280 (280)
23 cd08231 MDR_TM0436_like Hypoth 100.0 1E-32 2.2E-37 232.4 25.6 230 23-256 128-361 (361)
24 PLN02586 probable cinnamyl alc 100.0 3.7E-33 8.1E-38 234.4 22.8 236 3-256 102-353 (360)
25 PLN02178 cinnamyl-alcohol dehy 100.0 5E-33 1.1E-37 234.4 22.1 217 23-256 129-348 (375)
26 cd08233 butanediol_DH_like (2R 100.0 1.6E-32 3.6E-37 230.3 24.9 222 23-255 126-351 (351)
27 cd08295 double_bond_reductase_ 100.0 1.2E-32 2.6E-37 230.0 22.4 241 4-256 86-338 (338)
28 TIGR02819 fdhA_non_GSH formald 100.0 2.8E-32 6.1E-37 230.9 23.3 247 2-257 95-391 (393)
29 cd05279 Zn_ADH1 Liver alcohol 100.0 9.5E-32 2.1E-36 226.6 24.6 227 23-254 135-364 (365)
30 KOG1198 Zinc-binding oxidoredu 100.0 9.8E-33 2.1E-37 227.4 18.0 237 13-258 93-347 (347)
31 TIGR02822 adh_fam_2 zinc-bindi 100.0 5.5E-32 1.2E-36 224.8 22.0 210 23-254 118-328 (329)
32 cd08278 benzyl_alcohol_DH Benz 100.0 2.9E-31 6.4E-36 223.6 24.8 228 23-255 138-365 (365)
33 cd08291 ETR_like_1 2-enoyl thi 100.0 1.4E-31 3.1E-36 222.3 22.5 240 3-255 76-324 (324)
34 PLN02514 cinnamyl-alcohol dehy 100.0 1.6E-31 3.4E-36 224.5 22.5 218 23-257 132-351 (357)
35 TIGR02825 B4_12hDH leukotriene 100.0 2.6E-31 5.7E-36 220.7 22.1 235 8-255 75-325 (325)
36 cd08299 alcohol_DH_class_I_II_ 100.0 9E-31 2E-35 221.1 25.0 231 23-256 142-373 (373)
37 COG2130 Putative NADP-dependen 100.0 2.6E-31 5.7E-36 206.7 19.8 242 4-258 86-340 (340)
38 cd08230 glucose_DH Glucose deh 100.0 5.2E-31 1.1E-35 221.4 23.0 219 23-256 120-355 (355)
39 cd08294 leukotriene_B4_DH_like 100.0 1.1E-30 2.5E-35 217.2 23.3 237 7-256 76-329 (329)
40 TIGR01202 bchC 2-desacetyl-2-h 100.0 5.9E-31 1.3E-35 216.7 19.7 225 3-255 74-308 (308)
41 cd08285 NADP_ADH NADP(H)-depen 100.0 4.6E-30 1E-34 215.5 25.4 227 23-256 117-351 (351)
42 cd08237 ribitol-5-phosphate_DH 100.0 1.1E-30 2.4E-35 218.1 20.7 214 23-257 114-340 (341)
43 cd08292 ETR_like_2 2-enoyl thi 100.0 3.2E-30 6.9E-35 214.1 23.3 241 3-255 74-324 (324)
44 cd08238 sorbose_phosphate_red 100.0 4.2E-30 9.1E-35 219.5 24.4 246 3-257 78-369 (410)
45 cd08293 PTGR2 Prostaglandin re 100.0 4.1E-30 8.9E-35 215.3 23.5 243 3-256 84-345 (345)
46 cd08279 Zn_ADH_class_III Class 100.0 1.4E-29 3E-34 213.4 25.3 229 22-254 133-362 (363)
47 cd05284 arabinose_DH_like D-ar 100.0 1.6E-29 3.5E-34 211.3 23.8 219 23-256 118-340 (340)
48 cd08263 Zn_ADH10 Alcohol dehyd 100.0 2.1E-29 4.6E-34 212.6 24.7 227 23-255 139-367 (367)
49 cd08296 CAD_like Cinnamyl alco 100.0 1.6E-29 3.6E-34 210.6 23.4 217 23-255 116-333 (333)
50 PRK10083 putative oxidoreducta 100.0 2.6E-29 5.5E-34 210.0 24.5 223 22-258 113-339 (339)
51 cd08286 FDH_like_ADH2 formalde 100.0 4.2E-29 9.1E-34 209.2 24.5 223 24-256 117-345 (345)
52 cd08261 Zn_ADH7 Alcohol dehydr 100.0 8.4E-29 1.8E-33 206.7 25.2 221 23-256 114-337 (337)
53 cd08260 Zn_ADH6 Alcohol dehydr 100.0 8.7E-29 1.9E-33 207.3 24.5 227 22-255 114-344 (345)
54 cd05282 ETR_like 2-enoyl thioe 100.0 5.7E-29 1.2E-33 206.4 22.8 242 3-255 72-323 (323)
55 cd08283 FDH_like_1 Glutathione 100.0 9.8E-29 2.1E-33 209.7 24.6 225 23-256 135-386 (386)
56 cd08235 iditol_2_DH_like L-idi 100.0 1.3E-28 2.8E-33 206.1 24.6 241 3-255 69-343 (343)
57 cd08244 MDR_enoyl_red Possible 100.0 1.3E-28 2.9E-33 204.3 24.1 242 3-256 75-324 (324)
58 cd08246 crotonyl_coA_red croto 100.0 7.8E-29 1.7E-33 211.0 23.2 223 23-254 143-391 (393)
59 PTZ00354 alcohol dehydrogenase 100.0 1.6E-28 3.5E-33 204.6 24.4 244 3-257 74-329 (334)
60 cd05278 FDH_like Formaldehyde 100.0 1.4E-28 3.1E-33 206.1 23.2 225 23-256 118-347 (347)
61 cd08262 Zn_ADH8 Alcohol dehydr 100.0 1.9E-28 4.2E-33 204.9 23.7 239 4-255 80-341 (341)
62 cd08240 6_hydroxyhexanoate_dh_ 100.0 1.8E-28 4E-33 205.7 23.6 241 3-256 82-350 (350)
63 cd08284 FDH_like_2 Glutathione 100.0 3E-28 6.5E-33 203.9 24.5 223 23-255 118-343 (344)
64 cd05285 sorbitol_DH Sorbitol d 100.0 3.2E-28 6.9E-33 203.7 23.6 220 23-254 116-341 (343)
65 cd08256 Zn_ADH2 Alcohol dehydr 100.0 4E-28 8.7E-33 203.6 23.8 221 22-254 126-350 (350)
66 cd08297 CAD3 Cinnamyl alcohol 100.0 6.2E-28 1.3E-32 201.8 24.5 221 23-256 118-341 (341)
67 cd08287 FDH_like_ADH3 formalde 100.0 8.2E-28 1.8E-32 201.4 24.2 223 24-256 115-345 (345)
68 cd08236 sugar_DH NAD(P)-depend 100.0 7.5E-28 1.6E-32 201.5 24.0 243 3-254 68-343 (343)
69 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1E-27 2.3E-32 200.1 24.4 220 23-256 117-338 (338)
70 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1.1E-27 2.4E-32 203.2 24.7 226 23-254 148-383 (384)
71 TIGR01751 crot-CoA-red crotony 100.0 8.8E-28 1.9E-32 204.7 24.1 226 23-257 139-388 (398)
72 cd08282 PFDH_like Pseudomonas 100.0 1.5E-27 3.3E-32 201.7 24.9 224 24-256 125-375 (375)
73 cd08274 MDR9 Medium chain dehy 100.0 9E-28 2E-32 201.5 23.3 236 3-256 93-350 (350)
74 cd08290 ETR 2-enoyl thioester 100.0 6.1E-28 1.3E-32 201.9 22.2 246 3-256 79-341 (341)
75 TIGR02817 adh_fam_1 zinc-bindi 100.0 1E-27 2.2E-32 200.1 23.4 238 3-255 74-334 (336)
76 KOG1202 Animal-type fatty acid 100.0 2E-29 4.4E-34 223.4 13.7 238 12-256 1493-1741(2376)
77 cd08269 Zn_ADH9 Alcohol dehydr 100.0 2.7E-27 5.9E-32 195.5 24.8 241 3-254 67-311 (312)
78 TIGR00692 tdh L-threonine 3-de 100.0 2.3E-27 4.9E-32 198.3 24.3 241 3-256 71-340 (340)
79 PRK09422 ethanol-active dehydr 100.0 3E-27 6.5E-32 197.4 24.2 221 23-257 115-337 (338)
80 PRK05396 tdh L-threonine 3-deh 100.0 3.2E-27 6.9E-32 197.5 24.2 241 3-257 73-341 (341)
81 cd08270 MDR4 Medium chain dehy 100.0 1.8E-27 3.8E-32 196.0 21.7 234 3-256 67-305 (305)
82 cd08232 idonate-5-DH L-idonate 100.0 3.6E-27 7.7E-32 197.1 23.6 218 23-256 119-339 (339)
83 PRK10754 quinone oxidoreductas 100.0 1.1E-27 2.4E-32 199.2 20.3 244 3-256 73-327 (327)
84 PLN02702 L-idonate 5-dehydroge 100.0 5.6E-27 1.2E-31 197.7 24.7 223 23-255 135-363 (364)
85 cd05283 CAD1 Cinnamyl alcohol 100.0 2.4E-27 5.2E-32 197.9 21.8 216 22-255 121-337 (337)
86 cd08234 threonine_DH_like L-th 100.0 7.3E-27 1.6E-31 194.8 24.0 219 23-254 113-333 (334)
87 cd05281 TDH Threonine dehydrog 100.0 9.9E-27 2.1E-31 194.6 23.8 221 23-256 118-341 (341)
88 cd08242 MDR_like Medium chain 100.0 5.1E-27 1.1E-31 194.6 21.8 218 15-256 100-319 (319)
89 cd08243 quinone_oxidoreductase 100.0 7.7E-27 1.7E-31 193.3 21.8 234 8-254 75-319 (320)
90 cd08249 enoyl_reductase_like e 100.0 1.3E-26 2.9E-31 193.6 23.2 236 3-256 70-339 (339)
91 cd05286 QOR2 Quinone oxidoredu 100.0 2E-26 4.3E-31 190.4 24.0 243 3-256 70-320 (320)
92 KOG1196 Predicted NAD-dependen 100.0 3.6E-27 7.8E-32 183.1 17.7 242 3-257 85-341 (343)
93 cd08289 MDR_yhfp_like Yhfp put 100.0 1.6E-26 3.5E-31 192.1 22.7 238 7-256 75-326 (326)
94 KOG0025 Zn2+-binding dehydroge 100.0 6.2E-27 1.3E-31 180.8 18.5 244 3-257 93-353 (354)
95 TIGR02823 oxido_YhdH putative 100.0 2.9E-26 6.2E-31 190.3 23.0 236 6-255 73-322 (323)
96 cd08276 MDR7 Medium chain dehy 100.0 5E-26 1.1E-30 189.7 24.5 240 3-255 73-335 (336)
97 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 2.5E-26 5.5E-31 190.7 22.4 236 7-256 75-325 (325)
98 cd08250 Mgc45594_like Mgc45594 100.0 2.5E-26 5.4E-31 191.2 21.8 241 3-255 76-329 (329)
99 PRK13771 putative alcohol dehy 100.0 2.3E-26 5E-31 191.8 21.5 217 23-256 115-333 (334)
100 cd05288 PGDH Prostaglandin deh 99.9 4.5E-26 9.8E-31 189.6 21.4 234 8-254 83-329 (329)
101 cd05276 p53_inducible_oxidored 99.9 1.5E-25 3.3E-30 185.4 22.8 240 4-254 74-323 (323)
102 cd08258 Zn_ADH4 Alcohol dehydr 99.9 1.1E-25 2.3E-30 185.5 21.7 187 23-220 117-306 (306)
103 cd08252 AL_MDR Arginate lyase 99.9 2.2E-25 4.7E-30 186.0 23.8 241 3-255 75-336 (336)
104 cd08251 polyketide_synthase po 99.9 1.4E-25 3.1E-30 184.2 22.2 240 3-254 53-303 (303)
105 smart00829 PKS_ER Enoylreducta 99.9 1E-25 2.2E-30 183.5 20.5 239 3-253 39-287 (288)
106 cd08266 Zn_ADH_like1 Alcohol d 99.9 3.7E-25 8.1E-30 184.7 23.7 222 23-256 118-342 (342)
107 TIGR02824 quinone_pig3 putativ 99.9 2.4E-25 5.3E-30 184.4 22.3 241 4-255 74-324 (325)
108 cd08253 zeta_crystallin Zeta-c 99.9 4.1E-25 8.8E-30 183.0 23.4 242 3-256 73-325 (325)
109 cd08245 CAD Cinnamyl alcohol d 99.9 2.4E-25 5.1E-30 185.4 22.0 215 23-254 115-330 (330)
110 cd08255 2-desacetyl-2-hydroxye 99.9 4.3E-25 9.4E-30 179.4 22.2 229 3-254 36-277 (277)
111 cd08259 Zn_ADH5 Alcohol dehydr 99.9 6.7E-25 1.5E-29 182.7 23.2 216 23-255 115-332 (332)
112 cd08298 CAD2 Cinnamyl alcohol 99.9 8.6E-25 1.9E-29 182.0 22.3 209 23-254 120-329 (329)
113 cd08272 MDR6 Medium chain dehy 99.9 9.8E-25 2.1E-29 181.0 22.2 237 3-256 73-326 (326)
114 cd08288 MDR_yhdh Yhdh putative 99.9 1.4E-24 3.1E-29 180.2 22.7 237 6-256 74-324 (324)
115 cd08268 MDR2 Medium chain dehy 99.9 1.7E-24 3.7E-29 179.6 22.8 242 3-255 73-327 (328)
116 cd08264 Zn_ADH_like2 Alcohol d 99.9 1E-24 2.3E-29 181.2 20.7 207 22-250 114-321 (325)
117 cd05195 enoyl_red enoyl reduct 99.9 1.6E-24 3.4E-29 176.7 21.1 240 3-254 43-293 (293)
118 cd08241 QOR1 Quinone oxidoredu 99.9 4E-24 8.7E-29 176.9 23.1 239 5-254 75-322 (323)
119 cd08247 AST1_like AST1 is a cy 99.9 3.3E-24 7.2E-29 180.1 21.8 244 3-256 74-352 (352)
120 cd08273 MDR8 Medium chain dehy 99.9 1.9E-24 4.1E-29 180.0 20.0 238 3-254 73-330 (331)
121 cd08271 MDR5 Medium chain dehy 99.9 3.1E-24 6.7E-29 178.0 20.4 238 3-256 72-325 (325)
122 cd08248 RTN4I1 Human Reticulon 99.9 3.7E-24 7.9E-29 179.6 20.6 238 3-255 89-350 (350)
123 cd05188 MDR Medium chain reduc 99.9 7.7E-24 1.7E-28 171.1 20.9 202 3-216 45-270 (271)
124 cd08275 MDR3 Medium chain dehy 99.9 2.3E-23 4.9E-28 173.7 24.0 243 3-256 72-337 (337)
125 cd08267 MDR1 Medium chain dehy 99.9 1E-23 2.2E-28 174.5 20.4 235 3-253 74-318 (319)
126 cd05289 MDR_like_2 alcohol deh 99.9 2.5E-23 5.3E-28 171.3 19.7 227 4-253 76-308 (309)
127 PF00107 ADH_zinc_N: Zinc-bind 99.9 6.9E-21 1.5E-25 137.2 13.4 128 82-218 1-129 (130)
128 cd00401 AdoHcyase S-adenosyl-L 99.7 5E-15 1.1E-19 124.5 16.9 177 59-257 188-377 (413)
129 PRK09424 pntA NAD(P) transhydr 99.6 7.4E-14 1.6E-18 120.3 13.8 155 69-229 162-339 (509)
130 PF13602 ADH_zinc_N_2: Zinc-bi 99.4 6E-14 1.3E-18 100.5 2.9 120 115-254 1-127 (127)
131 PRK11873 arsM arsenite S-adeno 98.9 2.8E-08 6.1E-13 80.6 12.7 161 66-244 72-246 (272)
132 TIGR00561 pntA NAD(P) transhyd 98.9 2.1E-08 4.6E-13 86.7 11.5 108 70-179 162-289 (511)
133 PRK05476 S-adenosyl-L-homocyst 98.7 5.4E-07 1.2E-11 76.6 13.8 104 58-177 197-302 (425)
134 PRK08306 dipicolinate synthase 98.7 4.3E-07 9.4E-12 74.3 12.1 96 71-179 151-246 (296)
135 cd05213 NAD_bind_Glutamyl_tRNA 98.6 1.5E-07 3.3E-12 77.6 7.2 108 35-155 139-251 (311)
136 TIGR00936 ahcY adenosylhomocys 98.6 1.5E-06 3.3E-11 73.4 13.0 101 60-176 182-284 (406)
137 PLN02494 adenosylhomocysteinas 98.5 3.3E-06 7.2E-11 72.2 11.9 101 60-176 241-343 (477)
138 COG2518 Pcm Protein-L-isoaspar 98.4 1.3E-06 2.8E-11 66.5 7.6 117 44-174 47-169 (209)
139 TIGR00518 alaDH alanine dehydr 98.3 8.8E-06 1.9E-10 68.7 11.1 99 71-178 166-271 (370)
140 PRK00517 prmA ribosomal protei 98.3 2.1E-05 4.6E-10 62.9 12.6 139 13-176 69-215 (250)
141 PTZ00075 Adenosylhomocysteinas 98.2 2.6E-05 5.6E-10 67.0 12.4 100 61-176 242-343 (476)
142 TIGR02853 spore_dpaA dipicolin 98.2 4.8E-05 1E-09 62.0 13.4 95 71-178 150-244 (287)
143 PRK08324 short chain dehydroge 98.2 1.6E-05 3.4E-10 72.8 11.5 137 25-177 386-560 (681)
144 PRK12771 putative glutamate sy 98.2 2.9E-06 6.4E-11 75.9 6.4 80 68-154 133-234 (564)
145 PF01488 Shikimate_DH: Shikima 98.1 1.3E-05 2.9E-10 57.7 7.6 75 70-154 10-87 (135)
146 PRK00045 hemA glutamyl-tRNA re 98.1 4.2E-06 9.2E-11 72.0 5.8 89 55-154 162-254 (423)
147 COG2242 CobL Precorrin-6B meth 98.0 0.0001 2.2E-09 55.1 10.2 102 65-174 28-135 (187)
148 COG0300 DltE Short-chain dehyd 98.0 0.00023 4.9E-09 56.8 12.8 79 70-152 4-94 (265)
149 COG4221 Short-chain alcohol de 98.0 4.2E-05 9.1E-10 59.5 8.1 79 71-152 5-91 (246)
150 PRK11705 cyclopropane fatty ac 98.0 8E-05 1.7E-09 63.2 10.3 113 51-174 147-267 (383)
151 TIGR00406 prmA ribosomal prote 97.9 0.00011 2.4E-09 60.0 9.4 97 69-176 157-261 (288)
152 PRK05786 fabG 3-ketoacyl-(acyl 97.9 0.0003 6.4E-09 55.7 11.5 103 71-177 4-138 (238)
153 KOG1209 1-Acyl dihydroxyaceton 97.9 0.00019 4E-09 54.6 9.3 112 71-184 6-148 (289)
154 PRK00377 cbiT cobalt-precorrin 97.8 0.00024 5.2E-09 54.7 10.3 102 65-173 34-144 (198)
155 PRK13943 protein-L-isoaspartat 97.8 0.00029 6.2E-09 58.3 10.5 102 64-173 73-179 (322)
156 TIGR00438 rrmJ cell division p 97.7 0.0006 1.3E-08 52.1 11.0 100 66-174 27-146 (188)
157 COG1748 LYS9 Saccharopine dehy 97.7 0.00041 8.9E-09 58.3 10.7 95 73-175 2-100 (389)
158 TIGR01035 hemA glutamyl-tRNA r 97.7 0.00021 4.5E-09 61.5 9.1 77 67-154 175-252 (417)
159 COG3967 DltE Short-chain dehyd 97.7 0.00019 4.1E-09 54.3 7.6 80 71-152 4-88 (245)
160 PF11017 DUF2855: Protein of u 97.7 0.0015 3.3E-08 53.3 13.4 113 55-178 117-235 (314)
161 PRK04148 hypothetical protein; 97.7 0.0011 2.5E-08 47.1 11.1 89 68-166 13-101 (134)
162 PRK05993 short chain dehydroge 97.7 0.0004 8.6E-09 56.5 9.8 79 71-152 3-86 (277)
163 KOG1205 Predicted dehydrogenas 97.7 0.00078 1.7E-08 54.2 10.9 111 71-184 11-159 (282)
164 COG4122 Predicted O-methyltran 97.7 0.00077 1.7E-08 52.2 10.3 107 65-175 53-167 (219)
165 PF12847 Methyltransf_18: Meth 97.7 0.00016 3.4E-09 50.1 6.1 92 71-172 1-109 (112)
166 PRK13944 protein-L-isoaspartat 97.6 0.00051 1.1E-08 53.2 9.2 100 64-173 65-172 (205)
167 PF02826 2-Hacid_dh_C: D-isome 97.6 0.00084 1.8E-08 50.8 10.1 89 70-174 34-127 (178)
168 PRK13942 protein-L-isoaspartat 97.6 0.00057 1.2E-08 53.3 8.9 99 64-173 69-175 (212)
169 COG2519 GCD14 tRNA(1-methylade 97.6 0.00061 1.3E-08 53.4 8.8 103 64-175 87-196 (256)
170 PF01135 PCMT: Protein-L-isoas 97.6 0.00014 3E-09 56.4 5.3 110 52-173 55-171 (209)
171 PRK05693 short chain dehydroge 97.6 0.00044 9.6E-09 56.0 8.5 77 73-152 2-82 (274)
172 PF13460 NAD_binding_10: NADH( 97.6 0.0031 6.6E-08 47.7 12.4 94 75-177 1-100 (183)
173 PF13241 NAD_binding_7: Putati 97.5 0.0015 3.3E-08 44.6 9.3 94 71-182 6-99 (103)
174 PF01262 AlaDh_PNT_C: Alanine 97.5 0.00038 8.2E-09 52.2 6.7 105 71-178 19-143 (168)
175 TIGR02469 CbiT precorrin-6Y C5 97.5 0.0022 4.8E-08 45.0 10.4 100 65-173 13-121 (124)
176 PRK00107 gidB 16S rRNA methylt 97.5 0.0012 2.5E-08 50.4 9.3 96 69-173 43-144 (187)
177 COG2230 Cfa Cyclopropane fatty 97.5 0.0011 2.3E-08 53.3 9.4 105 59-179 60-181 (283)
178 PRK06139 short chain dehydroge 97.5 0.00055 1.2E-08 57.1 8.3 78 71-152 6-94 (330)
179 PF02353 CMAS: Mycolic acid cy 97.5 0.00085 1.8E-08 54.3 8.9 99 63-174 54-166 (273)
180 PRK08177 short chain dehydroge 97.5 0.00097 2.1E-08 52.3 9.2 76 73-152 2-81 (225)
181 PLN03209 translocon at the inn 97.5 0.0023 5.1E-08 56.6 12.0 105 65-177 73-210 (576)
182 PRK03369 murD UDP-N-acetylmura 97.5 0.00074 1.6E-08 59.5 9.1 75 68-154 8-82 (488)
183 PRK07109 short chain dehydroge 97.5 0.0028 6.1E-08 53.0 12.0 78 71-152 7-95 (334)
184 PRK06182 short chain dehydroge 97.4 0.00083 1.8E-08 54.4 8.5 79 71-152 2-84 (273)
185 cd01080 NAD_bind_m-THF_DH_Cycl 97.4 0.0021 4.6E-08 48.0 9.9 98 49-177 21-119 (168)
186 PRK12742 oxidoreductase; Provi 97.4 0.0037 8E-08 49.3 12.0 77 71-152 5-85 (237)
187 COG2264 PrmA Ribosomal protein 97.4 0.0025 5.5E-08 51.7 10.9 99 69-176 160-265 (300)
188 PRK06719 precorrin-2 dehydroge 97.4 0.003 6.5E-08 46.7 10.2 82 71-166 12-93 (157)
189 PRK13940 glutamyl-tRNA reducta 97.4 0.0011 2.5E-08 56.7 9.0 75 70-154 179-254 (414)
190 PRK06500 short chain dehydroge 97.4 0.0034 7.3E-08 49.9 11.3 78 71-152 5-90 (249)
191 PRK08017 oxidoreductase; Provi 97.4 0.00076 1.6E-08 53.9 7.5 77 73-152 3-84 (256)
192 PLN02781 Probable caffeoyl-CoA 97.4 0.0017 3.7E-08 51.4 9.2 105 65-174 62-178 (234)
193 PF08704 GCD14: tRNA methyltra 97.4 0.00046 1E-08 54.7 6.0 106 63-175 32-147 (247)
194 PRK08265 short chain dehydroge 97.4 0.0036 7.8E-08 50.3 11.3 79 71-152 5-90 (261)
195 COG0686 Ald Alanine dehydrogen 97.4 0.001 2.2E-08 53.7 7.7 99 72-178 168-272 (371)
196 TIGR00080 pimt protein-L-isoas 97.4 0.0021 4.5E-08 50.2 9.6 100 64-173 70-176 (215)
197 COG2227 UbiG 2-polyprenyl-3-me 97.4 0.0018 3.9E-08 50.5 8.8 96 70-174 58-161 (243)
198 PRK07806 short chain dehydroge 97.4 0.0045 9.7E-08 49.2 11.6 101 71-175 5-135 (248)
199 PRK07502 cyclohexadienyl dehyd 97.4 0.0019 4E-08 53.4 9.6 91 73-175 7-101 (307)
200 PRK06718 precorrin-2 dehydroge 97.4 0.0012 2.7E-08 50.9 8.0 93 71-176 9-102 (202)
201 PRK00536 speE spermidine synth 97.3 0.00084 1.8E-08 53.7 7.2 98 70-174 71-171 (262)
202 PRK07326 short chain dehydroge 97.3 0.0039 8.4E-08 49.2 11.0 79 71-152 5-92 (237)
203 PRK06949 short chain dehydroge 97.3 0.0013 2.9E-08 52.6 8.4 80 70-152 7-96 (258)
204 PRK06057 short chain dehydroge 97.3 0.0013 2.7E-08 52.7 8.2 79 71-152 6-89 (255)
205 COG2226 UbiE Methylase involve 97.3 0.0056 1.2E-07 48.2 11.4 107 64-178 44-160 (238)
206 PLN02780 ketoreductase/ oxidor 97.3 0.0014 3E-08 54.5 8.6 80 71-152 52-142 (320)
207 PF00670 AdoHcyase_NAD: S-aden 97.3 0.0037 7.9E-08 46.0 9.4 90 69-174 20-110 (162)
208 PF03446 NAD_binding_2: NAD bi 97.3 0.0066 1.4E-07 45.2 11.2 89 73-176 2-96 (163)
209 PRK14967 putative methyltransf 97.3 0.0053 1.1E-07 48.2 11.2 97 66-174 31-159 (223)
210 KOG1014 17 beta-hydroxysteroid 97.3 0.002 4.4E-08 52.0 8.8 78 70-152 47-136 (312)
211 PRK12549 shikimate 5-dehydroge 97.3 0.0035 7.6E-08 51.1 10.4 71 71-151 126-201 (284)
212 PRK00811 spermidine synthase; 97.3 0.002 4.3E-08 52.5 8.9 95 70-173 75-190 (283)
213 PRK08339 short chain dehydroge 97.3 0.0021 4.5E-08 51.9 8.9 79 71-152 7-95 (263)
214 PLN02366 spermidine synthase 97.3 0.0035 7.6E-08 51.6 10.2 103 70-174 90-206 (308)
215 PRK12939 short chain dehydroge 97.3 0.0055 1.2E-07 48.7 11.2 79 71-152 6-94 (250)
216 PRK06484 short chain dehydroge 97.3 0.005 1.1E-07 54.8 11.9 103 71-177 268-403 (520)
217 PRK07825 short chain dehydroge 97.3 0.0018 4E-08 52.4 8.5 78 72-152 5-88 (273)
218 PRK06101 short chain dehydroge 97.3 0.0066 1.4E-07 48.1 11.5 75 73-151 2-80 (240)
219 PRK08261 fabG 3-ketoacyl-(acyl 97.3 0.0046 1E-07 54.0 11.4 78 71-152 209-294 (450)
220 TIGR02356 adenyl_thiF thiazole 97.2 0.0038 8.3E-08 48.2 9.7 35 71-105 20-54 (202)
221 PRK07060 short chain dehydroge 97.2 0.003 6.4E-08 50.1 9.4 77 71-152 8-87 (245)
222 PRK07402 precorrin-6B methylas 97.2 0.0078 1.7E-07 46.3 11.4 102 64-174 33-142 (196)
223 PRK06200 2,3-dihydroxy-2,3-dih 97.2 0.0021 4.5E-08 51.7 8.4 79 71-152 5-90 (263)
224 PRK07904 short chain dehydroge 97.2 0.0041 8.8E-08 49.9 10.0 82 68-152 4-97 (253)
225 PRK06841 short chain dehydroge 97.2 0.0019 4.1E-08 51.6 8.1 79 71-152 14-99 (255)
226 TIGR03325 BphB_TodD cis-2,3-di 97.2 0.0015 3.3E-08 52.5 7.5 78 71-151 4-88 (262)
227 PRK08618 ornithine cyclodeamin 97.2 0.0059 1.3E-07 50.9 11.1 97 68-178 123-225 (325)
228 PRK12829 short chain dehydroge 97.2 0.0019 4.1E-08 51.9 7.9 82 69-153 8-97 (264)
229 TIGR01470 cysG_Nterm siroheme 97.2 0.0039 8.4E-08 48.3 9.2 94 71-176 8-102 (205)
230 PLN02476 O-methyltransferase 97.2 0.0035 7.6E-08 50.6 9.2 105 65-174 112-228 (278)
231 PRK05872 short chain dehydroge 97.2 0.002 4.4E-08 52.9 8.1 79 71-152 8-95 (296)
232 PRK05866 short chain dehydroge 97.2 0.0027 5.9E-08 52.1 8.8 79 71-152 39-127 (293)
233 cd01065 NAD_bind_Shikimate_DH 97.2 0.0031 6.7E-08 46.4 8.2 96 70-176 17-118 (155)
234 cd05311 NAD_bind_2_malic_enz N 97.2 0.012 2.6E-07 46.3 11.9 92 70-174 23-128 (226)
235 TIGR01318 gltD_gamma_fam gluta 97.2 0.0027 5.8E-08 55.7 9.0 79 70-154 139-238 (467)
236 PRK11207 tellurite resistance 97.2 0.0021 4.6E-08 49.5 7.5 99 65-174 24-134 (197)
237 PRK00258 aroE shikimate 5-dehy 97.2 0.0027 5.9E-08 51.7 8.5 95 70-174 121-221 (278)
238 PRK06128 oxidoreductase; Provi 97.2 0.0077 1.7E-07 49.6 11.3 79 71-152 54-144 (300)
239 PRK07814 short chain dehydroge 97.1 0.0029 6.4E-08 50.9 8.6 78 71-152 9-97 (263)
240 PRK07831 short chain dehydroge 97.1 0.0033 7.1E-08 50.6 8.8 81 69-152 14-107 (262)
241 PRK08217 fabG 3-ketoacyl-(acyl 97.1 0.0033 7.1E-08 50.0 8.8 78 71-151 4-91 (253)
242 PF03435 Saccharop_dh: Sacchar 97.1 0.005 1.1E-07 52.6 10.4 90 75-172 1-96 (386)
243 PRK05867 short chain dehydroge 97.1 0.0027 5.8E-08 50.8 8.2 79 71-152 8-96 (253)
244 TIGR01809 Shik-DH-AROM shikima 97.1 0.0023 5E-08 52.1 7.7 76 71-153 124-201 (282)
245 PRK06505 enoyl-(acyl carrier p 97.1 0.003 6.5E-08 51.2 8.3 78 71-151 6-94 (271)
246 PF00106 adh_short: short chai 97.1 0.0079 1.7E-07 44.6 10.0 78 73-152 1-90 (167)
247 COG0373 HemA Glutamyl-tRNA red 97.1 0.0048 1E-07 52.4 9.5 96 70-176 176-276 (414)
248 PRK06180 short chain dehydroge 97.1 0.0022 4.8E-08 52.1 7.4 79 71-152 3-88 (277)
249 PRK06196 oxidoreductase; Provi 97.1 0.0035 7.7E-08 51.9 8.7 79 71-152 25-109 (315)
250 PRK12809 putative oxidoreducta 97.1 0.0049 1.1E-07 56.2 10.1 77 71-153 309-406 (639)
251 PRK06398 aldose dehydrogenase; 97.1 0.0073 1.6E-07 48.5 10.1 74 71-152 5-82 (258)
252 PRK07231 fabG 3-ketoacyl-(acyl 97.1 0.0036 7.7E-08 49.8 8.2 79 71-152 4-91 (251)
253 PRK09291 short chain dehydroge 97.1 0.0048 1E-07 49.3 9.0 74 72-152 2-83 (257)
254 PF01596 Methyltransf_3: O-met 97.1 0.0013 2.8E-08 50.8 5.3 103 66-174 40-155 (205)
255 COG0169 AroE Shikimate 5-dehyd 97.0 0.0025 5.4E-08 51.6 7.1 44 71-114 125-168 (283)
256 PRK07478 short chain dehydroge 97.0 0.0041 8.9E-08 49.7 8.5 79 71-152 5-93 (254)
257 PRK14027 quinate/shikimate deh 97.0 0.0071 1.5E-07 49.3 9.7 44 70-113 125-168 (283)
258 PRK04457 spermidine synthase; 97.0 0.011 2.3E-07 47.7 10.7 95 70-173 65-176 (262)
259 PRK07062 short chain dehydroge 97.0 0.0042 9.1E-08 50.0 8.5 79 71-152 7-97 (265)
260 TIGR01832 kduD 2-deoxy-D-gluco 97.0 0.0052 1.1E-07 48.8 9.0 79 71-152 4-90 (248)
261 PRK07677 short chain dehydroge 97.0 0.0035 7.7E-08 50.0 8.0 78 72-152 1-88 (252)
262 PRK07832 short chain dehydroge 97.0 0.011 2.4E-07 47.8 10.9 74 74-152 2-88 (272)
263 PRK07533 enoyl-(acyl carrier p 97.0 0.0046 1E-07 49.6 8.6 78 71-151 9-97 (258)
264 PRK09072 short chain dehydroge 97.0 0.0051 1.1E-07 49.4 8.8 78 71-152 4-90 (263)
265 PRK01683 trans-aconitate 2-met 97.0 0.01 2.3E-07 47.6 10.6 98 65-174 25-130 (258)
266 PRK06940 short chain dehydroge 97.0 0.013 2.8E-07 47.6 11.1 77 72-152 2-86 (275)
267 PRK06953 short chain dehydroge 97.0 0.0065 1.4E-07 47.5 9.1 76 73-152 2-80 (222)
268 PRK12828 short chain dehydroge 97.0 0.0046 1E-07 48.7 8.3 79 71-152 6-92 (239)
269 PRK08703 short chain dehydroge 97.0 0.0034 7.4E-08 49.7 7.5 81 71-152 5-97 (239)
270 PRK15116 sulfur acceptor prote 97.0 0.022 4.8E-07 45.8 12.0 104 71-177 29-156 (268)
271 COG0031 CysK Cysteine synthase 97.0 0.039 8.6E-07 44.9 13.4 59 65-124 55-116 (300)
272 PRK12550 shikimate 5-dehydroge 97.0 0.0068 1.5E-07 49.0 9.0 70 68-152 118-188 (272)
273 PRK13394 3-hydroxybutyrate deh 97.0 0.0058 1.3E-07 49.0 8.8 81 71-152 6-94 (262)
274 PRK12548 shikimate 5-dehydroge 97.0 0.0078 1.7E-07 49.3 9.5 36 71-106 125-160 (289)
275 PRK00312 pcm protein-L-isoaspa 97.0 0.0084 1.8E-07 46.7 9.3 100 64-174 71-175 (212)
276 PRK06194 hypothetical protein; 97.0 0.0058 1.3E-07 49.8 8.7 79 71-152 5-93 (287)
277 PRK08261 fabG 3-ketoacyl-(acyl 97.0 0.0019 4.2E-08 56.3 6.2 94 65-177 27-126 (450)
278 PF06325 PrmA: Ribosomal prote 96.9 0.0028 6.1E-08 51.7 6.5 95 69-177 159-262 (295)
279 PRK08594 enoyl-(acyl carrier p 96.9 0.021 4.7E-07 45.8 11.7 78 71-151 6-96 (257)
280 cd01075 NAD_bind_Leu_Phe_Val_D 96.9 0.023 5.1E-07 43.8 11.3 81 70-164 26-107 (200)
281 PRK14175 bifunctional 5,10-met 96.9 0.013 2.7E-07 47.6 10.1 95 51-177 137-233 (286)
282 TIGR03840 TMPT_Se_Te thiopurin 96.9 0.015 3.3E-07 45.3 10.3 104 69-176 32-154 (213)
283 PF03807 F420_oxidored: NADP o 96.9 0.0088 1.9E-07 40.1 8.0 85 74-173 1-93 (96)
284 PRK06114 short chain dehydroge 96.9 0.008 1.7E-07 48.1 9.1 79 71-152 7-96 (254)
285 PRK08340 glucose-1-dehydrogena 96.9 0.0068 1.5E-07 48.6 8.6 76 74-152 2-86 (259)
286 PRK08628 short chain dehydroge 96.9 0.0067 1.5E-07 48.6 8.5 79 71-152 6-93 (258)
287 PRK06198 short chain dehydroge 96.9 0.0061 1.3E-07 48.8 8.3 79 71-152 5-94 (260)
288 PRK07523 gluconate 5-dehydroge 96.9 0.007 1.5E-07 48.4 8.6 79 71-152 9-97 (255)
289 PRK07063 short chain dehydroge 96.9 0.0065 1.4E-07 48.7 8.4 79 71-152 6-96 (260)
290 PRK06125 short chain dehydroge 96.9 0.011 2.3E-07 47.4 9.6 77 71-152 6-91 (259)
291 PRK12481 2-deoxy-D-gluconate 3 96.9 0.0072 1.5E-07 48.3 8.5 79 71-152 7-93 (251)
292 PRK05854 short chain dehydroge 96.9 0.0067 1.5E-07 50.3 8.5 40 71-111 13-53 (313)
293 PRK06603 enoyl-(acyl carrier p 96.9 0.0067 1.5E-07 48.8 8.4 78 71-151 7-95 (260)
294 PRK06701 short chain dehydroge 96.9 0.022 4.8E-07 46.6 11.4 80 70-152 44-134 (290)
295 cd00757 ThiF_MoeB_HesA_family 96.9 0.02 4.4E-07 45.1 10.7 35 71-105 20-54 (228)
296 PRK05875 short chain dehydroge 96.9 0.0074 1.6E-07 48.9 8.6 78 71-151 6-95 (276)
297 cd00755 YgdL_like Family of ac 96.9 0.013 2.8E-07 46.2 9.5 100 71-174 10-134 (231)
298 PRK06079 enoyl-(acyl carrier p 96.9 0.0052 1.1E-07 49.2 7.5 78 71-151 6-92 (252)
299 cd01483 E1_enzyme_family Super 96.9 0.016 3.5E-07 42.0 9.5 32 74-105 1-32 (143)
300 PRK07576 short chain dehydroge 96.9 0.0077 1.7E-07 48.5 8.6 78 71-151 8-95 (264)
301 COG4106 Tam Trans-aconitate me 96.9 0.0071 1.5E-07 46.4 7.6 95 66-171 25-126 (257)
302 PRK08690 enoyl-(acyl carrier p 96.9 0.0073 1.6E-07 48.6 8.4 79 71-152 5-94 (261)
303 PRK12475 thiamine/molybdopteri 96.9 0.011 2.5E-07 49.4 9.6 36 71-106 23-58 (338)
304 PRK08862 short chain dehydroge 96.8 0.0084 1.8E-07 47.2 8.5 78 71-151 4-92 (227)
305 PRK05876 short chain dehydroge 96.8 0.0079 1.7E-07 48.8 8.6 79 71-152 5-93 (275)
306 PRK07454 short chain dehydroge 96.8 0.0095 2E-07 47.2 8.9 80 70-152 4-93 (241)
307 PLN02589 caffeoyl-CoA O-methyl 96.8 0.011 2.4E-07 47.0 9.1 101 66-172 74-188 (247)
308 PRK08267 short chain dehydroge 96.8 0.01 2.2E-07 47.6 9.1 77 73-152 2-87 (260)
309 PRK08762 molybdopterin biosynt 96.8 0.017 3.8E-07 49.1 10.9 35 71-105 134-168 (376)
310 TIGR00138 gidB 16S rRNA methyl 96.8 0.011 2.4E-07 44.8 8.7 94 71-173 42-141 (181)
311 PRK08643 acetoin reductase; Va 96.8 0.0079 1.7E-07 48.1 8.4 78 72-152 2-89 (256)
312 PRK12937 short chain dehydroge 96.8 0.034 7.3E-07 44.0 12.0 79 71-152 4-93 (245)
313 TIGR00507 aroE shikimate 5-deh 96.8 0.0096 2.1E-07 48.3 8.9 93 69-175 114-215 (270)
314 PRK06172 short chain dehydroge 96.8 0.009 2E-07 47.7 8.7 78 71-152 6-94 (253)
315 PRK05717 oxidoreductase; Valid 96.8 0.0084 1.8E-07 48.0 8.5 79 71-152 9-94 (255)
316 PRK07340 ornithine cyclodeamin 96.8 0.0085 1.8E-07 49.4 8.6 96 69-178 122-221 (304)
317 PRK12769 putative oxidoreducta 96.8 0.0093 2E-07 54.6 9.7 78 70-153 325-423 (654)
318 KOG1201 Hydroxysteroid 17-beta 96.8 0.0088 1.9E-07 48.2 8.3 80 70-152 36-124 (300)
319 PRK06179 short chain dehydroge 96.8 0.0041 9E-08 50.2 6.7 77 71-152 3-83 (270)
320 PRK07035 short chain dehydroge 96.8 0.0084 1.8E-07 47.8 8.4 78 71-151 7-94 (252)
321 PRK05653 fabG 3-ketoacyl-(acyl 96.8 0.01 2.2E-07 46.9 8.8 79 71-152 4-92 (246)
322 cd01078 NAD_bind_H4MPT_DH NADP 96.8 0.021 4.6E-07 43.7 10.3 76 71-154 27-109 (194)
323 PRK06181 short chain dehydroge 96.8 0.0094 2E-07 47.9 8.7 78 72-152 1-88 (263)
324 TIGR02355 moeB molybdopterin s 96.8 0.014 3.1E-07 46.3 9.4 35 71-105 23-57 (240)
325 PRK08213 gluconate 5-dehydroge 96.8 0.0092 2E-07 47.8 8.6 79 71-152 11-99 (259)
326 PRK14103 trans-aconitate 2-met 96.8 0.019 4E-07 46.1 10.3 96 64-173 22-125 (255)
327 PRK06197 short chain dehydroge 96.8 0.0089 1.9E-07 49.3 8.6 79 71-152 15-105 (306)
328 PRK12823 benD 1,6-dihydroxycyc 96.8 0.0071 1.5E-07 48.5 7.9 78 71-151 7-93 (260)
329 PRK08415 enoyl-(acyl carrier p 96.8 0.0092 2E-07 48.4 8.6 103 71-177 4-146 (274)
330 TIGR00477 tehB tellurite resis 96.8 0.022 4.8E-07 43.7 10.2 100 63-174 22-133 (195)
331 PRK07774 short chain dehydroge 96.8 0.011 2.3E-07 47.1 8.8 79 71-152 5-93 (250)
332 PRK07890 short chain dehydroge 96.8 0.0091 2E-07 47.7 8.5 79 71-152 4-92 (258)
333 PRK08264 short chain dehydroge 96.8 0.012 2.5E-07 46.5 9.0 75 71-152 5-83 (238)
334 COG1179 Dinucleotide-utilizing 96.8 0.032 6.9E-07 43.6 10.8 103 71-177 29-156 (263)
335 CHL00194 ycf39 Ycf39; Provisio 96.8 0.0099 2.1E-07 49.3 8.9 95 74-176 2-111 (317)
336 PRK08589 short chain dehydroge 96.8 0.0085 1.8E-07 48.5 8.3 79 71-152 5-92 (272)
337 PRK00121 trmB tRNA (guanine-N( 96.8 0.027 5.9E-07 43.5 10.7 98 71-174 40-156 (202)
338 PRK06138 short chain dehydroge 96.8 0.0092 2E-07 47.5 8.4 79 71-152 4-91 (252)
339 PRK05884 short chain dehydroge 96.8 0.011 2.4E-07 46.4 8.7 74 74-151 2-78 (223)
340 PRK07688 thiamine/molybdopteri 96.8 0.012 2.7E-07 49.1 9.3 35 71-105 23-57 (339)
341 PRK05690 molybdopterin biosynt 96.8 0.02 4.3E-07 45.7 10.0 35 71-105 31-65 (245)
342 PF02558 ApbA: Ketopantoate re 96.8 0.004 8.7E-08 45.6 5.7 95 75-174 1-101 (151)
343 PRK08287 cobalt-precorrin-6Y C 96.8 0.028 6E-07 42.8 10.5 97 65-173 25-130 (187)
344 PRK07985 oxidoreductase; Provi 96.7 0.03 6.5E-07 45.9 11.4 103 71-177 48-188 (294)
345 PRK14903 16S rRNA methyltransf 96.7 0.021 4.5E-07 49.5 10.8 101 65-174 231-366 (431)
346 PRK06720 hypothetical protein; 96.7 0.015 3.2E-07 43.6 8.7 39 71-110 15-54 (169)
347 PRK06914 short chain dehydroge 96.7 0.0096 2.1E-07 48.3 8.4 77 72-152 3-91 (280)
348 PRK12384 sorbitol-6-phosphate 96.7 0.0094 2E-07 47.7 8.2 78 72-152 2-91 (259)
349 PRK06483 dihydromonapterin red 96.7 0.015 3.3E-07 45.9 9.2 78 72-152 2-84 (236)
350 PRK09242 tropinone reductase; 96.7 0.012 2.5E-07 47.1 8.7 79 71-152 8-98 (257)
351 PRK07574 formate dehydrogenase 96.7 0.027 5.8E-07 47.9 11.0 46 71-117 191-236 (385)
352 TIGR03206 benzo_BadH 2-hydroxy 96.7 0.011 2.3E-07 47.0 8.4 78 71-151 2-89 (250)
353 PRK01581 speE spermidine synth 96.7 0.038 8.3E-07 46.3 11.6 102 70-174 149-268 (374)
354 PRK08277 D-mannonate oxidoredu 96.7 0.011 2.4E-07 48.0 8.5 78 71-151 9-96 (278)
355 COG2910 Putative NADH-flavin r 96.7 0.02 4.4E-07 42.8 8.9 93 74-177 2-107 (211)
356 PRK08159 enoyl-(acyl carrier p 96.7 0.011 2.4E-07 48.0 8.4 78 71-151 9-97 (272)
357 PRK09186 flagellin modificatio 96.7 0.01 2.2E-07 47.4 8.2 78 71-151 3-92 (256)
358 PLN00203 glutamyl-tRNA reducta 96.7 0.0089 1.9E-07 52.8 8.3 73 72-154 266-341 (519)
359 PRK08317 hypothetical protein; 96.7 0.023 5.1E-07 44.7 10.1 101 64-174 12-124 (241)
360 PRK08993 2-deoxy-D-gluconate 3 96.7 0.014 3E-07 46.7 8.9 79 71-152 9-95 (253)
361 PRK07984 enoyl-(acyl carrier p 96.7 0.013 2.9E-07 47.2 8.8 78 71-151 5-93 (262)
362 PRK08328 hypothetical protein; 96.7 0.012 2.6E-07 46.5 8.2 35 71-105 26-60 (231)
363 TIGR00446 nop2p NOL1/NOP2/sun 96.7 0.045 9.8E-07 44.2 11.8 101 66-174 66-199 (264)
364 PRK11036 putative S-adenosyl-L 96.7 0.032 6.9E-07 44.8 10.8 94 70-174 43-149 (255)
365 PRK07067 sorbitol dehydrogenas 96.7 0.013 2.9E-07 46.8 8.7 79 71-152 5-90 (257)
366 PRK08226 short chain dehydroge 96.7 0.013 2.8E-07 47.1 8.6 79 71-152 5-92 (263)
367 PRK10258 biotin biosynthesis p 96.7 0.05 1.1E-06 43.5 12.0 99 65-175 36-141 (251)
368 TIGR01505 tartro_sem_red 2-hyd 96.7 0.026 5.7E-07 46.2 10.5 70 74-157 1-70 (291)
369 PRK06484 short chain dehydroge 96.7 0.0096 2.1E-07 53.0 8.5 79 71-152 4-89 (520)
370 PLN02244 tocopherol O-methyltr 96.7 0.011 2.5E-07 49.5 8.4 96 70-176 117-225 (340)
371 PLN03139 formate dehydrogenase 96.7 0.025 5.5E-07 48.0 10.5 46 71-117 198-243 (386)
372 PRK07024 short chain dehydroge 96.7 0.014 3E-07 46.8 8.7 78 72-152 2-88 (257)
373 PLN02253 xanthoxin dehydrogena 96.7 0.011 2.3E-07 48.0 8.1 79 71-152 17-104 (280)
374 PRK07453 protochlorophyllide o 96.7 0.012 2.7E-07 48.9 8.6 78 71-151 5-92 (322)
375 PRK06482 short chain dehydroge 96.7 0.013 2.7E-07 47.5 8.5 77 73-152 3-86 (276)
376 PRK08085 gluconate 5-dehydroge 96.7 0.016 3.4E-07 46.3 8.9 79 71-152 8-96 (254)
377 PRK12747 short chain dehydroge 96.7 0.052 1.1E-06 43.2 11.9 106 71-178 3-148 (252)
378 PRK10538 malonic semialdehyde 96.6 0.013 2.8E-07 46.7 8.4 76 74-152 2-84 (248)
379 PRK08251 short chain dehydroge 96.6 0.015 3.2E-07 46.2 8.7 77 72-151 2-90 (248)
380 PRK08303 short chain dehydroge 96.6 0.014 2.9E-07 48.3 8.6 35 71-106 7-42 (305)
381 PRK08263 short chain dehydroge 96.6 0.013 2.8E-07 47.4 8.5 78 72-152 3-87 (275)
382 PRK04266 fibrillarin; Provisio 96.6 0.038 8.2E-07 43.5 10.7 102 65-173 66-175 (226)
383 PLN02823 spermine synthase 96.6 0.023 4.9E-07 47.4 9.8 100 71-173 103-219 (336)
384 PRK07102 short chain dehydroge 96.6 0.019 4.1E-07 45.5 9.1 76 73-152 2-86 (243)
385 PRK06124 gluconate 5-dehydroge 96.6 0.016 3.4E-07 46.3 8.7 79 71-152 10-98 (256)
386 PRK08219 short chain dehydroge 96.6 0.028 6.1E-07 43.9 10.0 72 73-152 4-81 (227)
387 PRK08644 thiamine biosynthesis 96.6 0.02 4.3E-07 44.6 8.9 35 71-105 27-61 (212)
388 KOG4022 Dihydropteridine reduc 96.6 0.03 6.6E-07 40.9 9.1 97 72-175 3-130 (236)
389 PRK07856 short chain dehydroge 96.6 0.011 2.4E-07 47.1 7.8 75 71-152 5-85 (252)
390 PF00899 ThiF: ThiF family; I 96.6 0.052 1.1E-06 38.9 10.6 97 72-174 2-124 (135)
391 PLN03075 nicotianamine synthas 96.6 0.019 4E-07 46.8 8.8 99 71-176 123-234 (296)
392 COG2084 MmsB 3-hydroxyisobutyr 96.6 0.038 8.3E-07 44.8 10.5 89 74-177 2-98 (286)
393 COG0421 SpeE Spermidine syntha 96.6 0.025 5.4E-07 45.9 9.6 98 73-173 78-189 (282)
394 PRK12367 short chain dehydroge 96.6 0.024 5.1E-07 45.3 9.4 74 71-152 13-89 (245)
395 KOG0725 Reductases with broad 96.6 0.0083 1.8E-07 48.6 6.7 82 70-152 6-99 (270)
396 PF02254 TrkA_N: TrkA-N domain 96.6 0.099 2.2E-06 36.2 11.5 92 75-173 1-95 (116)
397 PF02670 DXP_reductoisom: 1-de 96.6 0.053 1.2E-06 38.4 9.9 87 75-166 1-114 (129)
398 PRK05562 precorrin-2 dehydroge 96.6 0.026 5.6E-07 44.1 9.1 93 71-176 24-118 (223)
399 PRK12429 3-hydroxybutyrate deh 96.6 0.016 3.5E-07 46.2 8.5 79 71-152 3-91 (258)
400 cd01492 Aos1_SUMO Ubiquitin ac 96.6 0.029 6.2E-07 43.2 9.4 35 71-105 20-54 (197)
401 TIGR03215 ac_ald_DH_ac acetald 96.6 0.046 9.9E-07 44.5 10.8 87 74-173 3-93 (285)
402 COG0334 GdhA Glutamate dehydro 96.5 0.041 8.8E-07 46.5 10.7 137 46-188 182-348 (411)
403 PRK06935 2-deoxy-D-gluconate 3 96.5 0.019 4.1E-07 46.0 8.7 78 71-152 14-101 (258)
404 PRK14618 NAD(P)H-dependent gly 96.5 0.041 8.9E-07 45.9 10.9 96 72-175 4-105 (328)
405 PRK07074 short chain dehydroge 96.5 0.018 3.8E-07 46.1 8.5 78 72-152 2-87 (257)
406 PRK12826 3-ketoacyl-(acyl-carr 96.5 0.018 3.8E-07 45.7 8.4 79 71-152 5-93 (251)
407 PRK14192 bifunctional 5,10-met 96.5 0.035 7.7E-07 45.1 10.0 77 70-177 157-234 (283)
408 PF05368 NmrA: NmrA-like famil 96.5 0.028 6.1E-07 44.3 9.5 70 75-151 1-73 (233)
409 PLN02256 arogenate dehydrogena 96.5 0.071 1.5E-06 44.0 11.9 96 64-175 28-128 (304)
410 TIGR00563 rsmB ribosomal RNA s 96.5 0.033 7.2E-07 48.3 10.5 102 65-174 232-368 (426)
411 cd01487 E1_ThiF_like E1_ThiF_l 96.5 0.045 9.7E-07 41.2 9.9 33 74-106 1-33 (174)
412 PRK06141 ornithine cyclodeamin 96.5 0.033 7.2E-07 46.2 10.1 95 69-176 122-221 (314)
413 PRK05597 molybdopterin biosynt 96.5 0.025 5.4E-07 47.7 9.4 36 71-106 27-62 (355)
414 PRK11559 garR tartronate semia 96.5 0.051 1.1E-06 44.6 11.1 70 74-157 4-73 (296)
415 PRK07666 fabG 3-ketoacyl-(acyl 96.5 0.022 4.7E-07 45.0 8.7 79 71-152 6-94 (239)
416 PTZ00098 phosphoethanolamine N 96.5 0.016 3.4E-07 46.8 7.9 104 63-175 44-157 (263)
417 PRK08300 acetaldehyde dehydrog 96.5 0.041 8.9E-07 45.0 10.1 92 73-173 5-100 (302)
418 PRK12743 oxidoreductase; Provi 96.5 0.024 5.1E-07 45.4 8.9 77 72-152 2-90 (256)
419 PRK07577 short chain dehydroge 96.5 0.015 3.2E-07 45.8 7.5 74 71-152 2-78 (234)
420 PRK06113 7-alpha-hydroxysteroi 96.5 0.02 4.4E-07 45.8 8.4 79 71-152 10-98 (255)
421 PRK08278 short chain dehydroge 96.4 0.023 5.1E-07 46.0 8.8 79 71-152 5-100 (273)
422 PLN00141 Tic62-NAD(P)-related 96.4 0.024 5.3E-07 45.3 8.8 101 70-176 15-133 (251)
423 PRK07791 short chain dehydroge 96.4 0.026 5.6E-07 46.1 9.0 36 70-106 4-40 (286)
424 PRK14901 16S rRNA methyltransf 96.4 0.032 7E-07 48.5 10.0 104 65-174 246-384 (434)
425 PRK05708 2-dehydropantoate 2-r 96.4 0.02 4.3E-07 47.3 8.4 94 73-173 3-103 (305)
426 PF01408 GFO_IDH_MocA: Oxidore 96.4 0.11 2.5E-06 36.1 11.3 87 74-174 2-92 (120)
427 COG0569 TrkA K+ transport syst 96.4 0.044 9.5E-07 43.1 9.9 83 74-163 2-86 (225)
428 PRK12936 3-ketoacyl-(acyl-carr 96.4 0.025 5.4E-07 44.7 8.7 79 71-152 5-90 (245)
429 PRK07097 gluconate 5-dehydroge 96.4 0.025 5.4E-07 45.5 8.8 79 71-152 9-97 (265)
430 PRK08945 putative oxoacyl-(acy 96.4 0.025 5.5E-07 44.9 8.7 84 68-152 8-102 (247)
431 TIGR02354 thiF_fam2 thiamine b 96.4 0.012 2.5E-07 45.4 6.5 35 71-105 20-54 (200)
432 PRK06077 fabG 3-ketoacyl-(acyl 96.4 0.1 2.2E-06 41.4 12.2 103 71-177 5-143 (252)
433 PRK06463 fabG 3-ketoacyl-(acyl 96.4 0.024 5.3E-07 45.3 8.6 79 71-152 6-89 (255)
434 PRK05650 short chain dehydroge 96.4 0.022 4.8E-07 45.9 8.4 76 74-152 2-87 (270)
435 PRK15469 ghrA bifunctional gly 96.4 0.042 9.1E-07 45.5 10.0 87 71-174 135-226 (312)
436 TIGR02632 RhaD_aldol-ADH rhamn 96.4 0.018 3.9E-07 53.0 8.6 79 71-152 413-503 (676)
437 PRK07417 arogenate dehydrogena 96.4 0.029 6.4E-07 45.7 9.0 68 74-154 2-69 (279)
438 PRK07792 fabG 3-ketoacyl-(acyl 96.4 0.031 6.7E-07 46.2 9.3 81 71-152 11-99 (306)
439 PRK05600 thiamine biosynthesis 96.4 0.034 7.4E-07 47.1 9.5 35 71-105 40-74 (370)
440 PRK14188 bifunctional 5,10-met 96.3 0.05 1.1E-06 44.4 9.9 94 51-177 137-233 (296)
441 PRK06523 short chain dehydroge 96.3 0.019 4.1E-07 46.0 7.6 74 71-151 8-86 (260)
442 PRK14106 murD UDP-N-acetylmura 96.3 0.03 6.4E-07 48.9 9.3 71 71-153 4-79 (450)
443 TIGR02992 ectoine_eutC ectoine 96.3 0.049 1.1E-06 45.4 10.2 94 70-176 127-226 (326)
444 PRK06997 enoyl-(acyl carrier p 96.3 0.025 5.4E-07 45.5 8.1 79 71-152 5-94 (260)
445 PRK01438 murD UDP-N-acetylmura 96.3 0.038 8.3E-07 48.7 9.9 70 70-152 14-88 (480)
446 PRK06522 2-dehydropantoate 2-r 96.3 0.024 5.2E-07 46.7 8.1 85 74-164 2-87 (304)
447 PLN02233 ubiquinone biosynthes 96.3 0.057 1.2E-06 43.5 10.1 102 65-176 67-184 (261)
448 PLN02657 3,8-divinyl protochlo 96.3 0.038 8.3E-07 47.3 9.5 81 68-152 56-146 (390)
449 KOG1610 Corticosteroid 11-beta 96.3 0.1 2.2E-06 42.5 11.2 108 70-178 27-168 (322)
450 PRK07424 bifunctional sterol d 96.3 0.035 7.6E-07 47.6 9.1 74 71-152 177-255 (406)
451 PRK03562 glutathione-regulated 96.3 0.047 1E-06 49.7 10.4 76 72-154 400-476 (621)
452 COG1648 CysG Siroheme synthase 96.3 0.039 8.5E-07 42.8 8.6 96 71-178 11-107 (210)
453 PRK12746 short chain dehydroge 96.3 0.11 2.3E-06 41.4 11.6 38 71-109 5-44 (254)
454 TIGR01963 PHB_DH 3-hydroxybuty 96.3 0.028 6.1E-07 44.7 8.2 78 72-152 1-88 (255)
455 PRK07370 enoyl-(acyl carrier p 96.2 0.024 5.3E-07 45.5 7.7 103 71-177 5-150 (258)
456 PF01210 NAD_Gly3P_dh_N: NAD-d 96.2 0.056 1.2E-06 39.9 9.0 85 74-165 1-91 (157)
457 PRK10669 putative cation:proto 96.2 0.049 1.1E-06 49.0 10.3 76 73-154 418-493 (558)
458 PRK14194 bifunctional 5,10-met 96.2 0.069 1.5E-06 43.6 10.1 94 51-176 138-233 (301)
459 PRK13243 glyoxylate reductase; 96.2 0.07 1.5E-06 44.6 10.5 37 71-108 149-185 (333)
460 TIGR00417 speE spermidine synt 96.2 0.059 1.3E-06 43.7 9.8 102 70-174 71-186 (270)
461 TIGR02622 CDP_4_6_dhtase CDP-g 96.2 0.032 7E-07 46.9 8.6 75 71-152 3-85 (349)
462 PF10727 Rossmann-like: Rossma 96.2 0.017 3.8E-07 40.9 5.8 79 72-165 10-90 (127)
463 TIGR00452 methyltransferase, p 96.2 0.024 5.3E-07 46.8 7.5 99 63-174 113-225 (314)
464 PRK07775 short chain dehydroge 96.2 0.035 7.7E-07 44.9 8.4 79 71-152 9-97 (274)
465 PF13659 Methyltransf_26: Meth 96.2 0.022 4.8E-07 39.5 6.3 93 72-173 1-114 (117)
466 PRK15461 NADH-dependent gamma- 96.2 0.1 2.2E-06 43.0 11.0 43 74-117 3-45 (296)
467 PRK12490 6-phosphogluconate de 96.1 0.095 2.1E-06 43.1 10.9 43 74-117 2-44 (299)
468 PF01209 Ubie_methyltran: ubiE 96.1 0.0063 1.4E-07 48.1 3.7 104 65-178 41-157 (233)
469 TIGR02752 MenG_heptapren 2-hep 96.1 0.023 5E-07 44.8 6.9 100 65-174 39-151 (231)
470 PRK13255 thiopurine S-methyltr 96.1 0.077 1.7E-06 41.5 9.7 101 68-174 34-155 (218)
471 PLN02520 bifunctional 3-dehydr 96.1 0.024 5.1E-07 50.5 7.6 92 71-174 378-475 (529)
472 TIGR02371 ala_DH_arch alanine 96.1 0.067 1.5E-06 44.6 9.9 96 69-177 125-225 (325)
473 PRK05557 fabG 3-ketoacyl-(acyl 96.1 0.05 1.1E-06 43.0 8.9 79 71-152 4-93 (248)
474 PRK11933 yebU rRNA (cytosine-C 96.1 0.1 2.2E-06 45.6 11.3 101 68-176 110-243 (470)
475 TIGR00872 gnd_rel 6-phosphoglu 96.1 0.12 2.6E-06 42.5 11.3 43 74-117 2-44 (298)
476 PRK07578 short chain dehydroge 96.1 0.19 4.2E-06 38.4 11.9 63 74-152 2-65 (199)
477 PRK09599 6-phosphogluconate de 96.1 0.11 2.5E-06 42.7 11.2 43 74-117 2-44 (301)
478 KOG1207 Diacetyl reductase/L-x 96.1 0.024 5.1E-07 42.1 6.2 43 71-114 6-49 (245)
479 cd05211 NAD_bind_Glu_Leu_Phe_V 96.1 0.043 9.4E-07 42.8 8.1 36 70-106 21-57 (217)
480 PRK08063 enoyl-(acyl carrier p 96.1 0.045 9.8E-07 43.4 8.6 79 71-152 3-92 (250)
481 PLN00016 RNA-binding protein; 96.1 0.081 1.8E-06 45.1 10.6 95 72-175 52-165 (378)
482 PF05724 TPMT: Thiopurine S-me 96.1 0.012 2.6E-07 46.0 5.1 105 66-175 32-156 (218)
483 PRK13656 trans-2-enoyl-CoA red 96.1 0.044 9.6E-07 46.3 8.6 81 70-153 39-142 (398)
484 KOG1252 Cystathionine beta-syn 96.1 0.05 1.1E-06 44.6 8.5 57 65-122 96-156 (362)
485 COG0144 Sun tRNA and rRNA cyto 96.1 0.045 9.7E-07 46.2 8.7 102 65-174 150-288 (355)
486 PLN02928 oxidoreductase family 96.1 0.063 1.4E-06 45.2 9.6 95 71-174 158-262 (347)
487 PRK08416 7-alpha-hydroxysteroi 96.1 0.05 1.1E-06 43.6 8.8 78 71-151 7-96 (260)
488 PLN02730 enoyl-[acyl-carrier-p 96.1 0.095 2.1E-06 43.2 10.4 37 71-109 8-47 (303)
489 PRK05447 1-deoxy-D-xylulose 5- 96.1 0.12 2.7E-06 43.6 11.1 94 73-172 2-120 (385)
490 cd01485 E1-1_like Ubiquitin ac 96.1 0.1 2.3E-06 40.1 10.0 35 71-105 18-52 (198)
491 PLN02986 cinnamyl-alcohol dehy 96.1 0.075 1.6E-06 44.1 10.0 39 71-110 4-43 (322)
492 PF01113 DapB_N: Dihydrodipico 96.1 0.1 2.2E-06 36.9 9.2 94 74-178 2-101 (124)
493 PF01564 Spermine_synth: Sperm 96.1 0.036 7.7E-07 44.2 7.6 96 71-174 76-191 (246)
494 TIGR02415 23BDH acetoin reduct 96.0 0.05 1.1E-06 43.3 8.5 77 73-152 1-87 (254)
495 PRK14968 putative methyltransf 96.0 0.08 1.7E-06 40.1 9.3 43 69-114 21-63 (188)
496 PRK06171 sorbitol-6-phosphate 96.0 0.028 6.1E-07 45.2 7.1 76 71-152 8-87 (266)
497 PRK05855 short chain dehydroge 96.0 0.037 8.1E-07 49.7 8.6 79 71-152 314-402 (582)
498 PRK08642 fabG 3-ketoacyl-(acyl 96.0 0.081 1.8E-06 42.0 9.7 78 71-151 4-90 (253)
499 PRK11188 rrmJ 23S rRNA methylt 96.0 0.14 3E-06 39.8 10.6 98 69-174 49-165 (209)
500 PLN02336 phosphoethanolamine N 96.0 0.033 7.1E-07 49.1 7.9 100 65-174 260-369 (475)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.5e-42 Score=279.31 Aligned_cols=239 Identities=25% Similarity=0.405 Sum_probs=214.5
Q ss_pred CCCCCccccCCCCceee-------eeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCE
Q 025101 2 PRDQTSRFKDLRGETIH-------HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGST 74 (258)
Q Consensus 2 ~~~~~~~~~~~~G~~v~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~ 74 (258)
.+|+.|.+| +.|...+ ++..+|+|+||+++|+++++++|+++++++||.+.|++.|.|++| +..++++|++
T Consensus 92 ~~Cg~C~~C-~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~al-k~~~~~pG~~ 169 (339)
T COG1064 92 ISCGECEYC-RSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-KKANVKPGKW 169 (339)
T ss_pred CCCCCCccc-cCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeeh-hhcCCCCCCE
Confidence 579999999 9997664 677789999999999999999999999999999999999999997 5599999999
Q ss_pred EEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChh
Q 025101 75 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS 154 (258)
Q Consensus 75 vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~ 154 (258)
|+|+|.|++|++++|+|+.+|+ +|++++++++|.+.++++|++++++.++ ++..+.+++. +|+++|+++ +.
T Consensus 170 V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~~---~~~~~~~~~~----~d~ii~tv~-~~ 240 (339)
T COG1064 170 VAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSSD---SDALEAVKEI----ADAIIDTVG-PA 240 (339)
T ss_pred EEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcCC---chhhHHhHhh----CcEEEECCC-hh
Confidence 9999999999999999999998 9999999999999999999999999876 7787777763 999999999 77
Q ss_pred hHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCccccccccc
Q 025101 155 LVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKF 234 (258)
Q Consensus 155 ~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 234 (258)
+++.+++.|+++ |+++++|........+.+.+.++.+++++.|+..++ +.++++++++..+|.+++. +.+.+++
T Consensus 241 ~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~---~~d~~e~l~f~~~g~Ikp~--i~e~~~l 314 (339)
T COG1064 241 TLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT---RADLEEALDFAAEGKIKPE--ILETIPL 314 (339)
T ss_pred hHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC---HHHHHHHHHHHHhCCceee--EEeeECH
Confidence 799999999999 999999977422334567777888899999998777 6899999999999965544 6479999
Q ss_pred ccHHHHHHHHhcCCee-EEEEeeC
Q 025101 235 EEINSAFDLLIKGKCL-RCVIWMG 257 (258)
Q Consensus 235 ~~~~~a~~~~~~~~~~-k~vi~~~ 257 (258)
+++++||+.+++++.. |+||.+.
T Consensus 315 ~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 315 DEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred HHHHHHHHHHHcCCeeeEEEecCC
Confidence 9999999999999988 9999875
No 2
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.7e-40 Score=259.05 Aligned_cols=248 Identities=24% Similarity=0.396 Sum_probs=214.5
Q ss_pred CCCCCccccCCCCceee----ee----ccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCC
Q 025101 2 PRDQTSRFKDLRGETIH----HF----VSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGS 73 (258)
Q Consensus 2 ~~~~~~~~~~~~G~~v~----~~----~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~ 73 (258)
++|+.|++| +.|.+++ .| +-+|++++|+++++++|+|+|+++|++++|++. ++++++||. +++++++|.
T Consensus 95 ~~c~~cd~C-K~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs 171 (354)
T KOG0024|consen 95 LPCRDCDFC-KEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLSVGVHAC-RRAGVKKGS 171 (354)
T ss_pred Cccccchhh-hCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhccccc-chhhhhhhh-hhcCcccCC
Confidence 468888888 8888886 12 123999999999999999999999999999998 799999985 799999999
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCC-CccHHHHHHHhcCC-CCCEEEEecC
Q 025101 74 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG-DKSVSQIIIDMTDG-GADYCFECVG 151 (258)
Q Consensus 74 ~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~~~i~~~~~~-~~d~v~d~~g 151 (258)
+|||+|+|++|+.+...||.+|+.+|++++..++|++.++++|++.+.+....+ ++++.+.+....++ .+|++|||+|
T Consensus 172 ~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG 251 (354)
T KOG0024|consen 172 KVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSG 251 (354)
T ss_pred eEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccC
Confidence 999999999999999999999999999999999999999999998776655522 34445555555554 6999999999
Q ss_pred ChhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccc
Q 025101 152 LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHE 231 (258)
Q Consensus 152 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 231 (258)
...+++.++..++.+ |++++.|+.. +..+|+......|++++.|++-+. +.+|+..++++++|++++++++|++
T Consensus 252 ~~~~~~aai~a~r~g-Gt~vlvg~g~--~~~~fpi~~v~~kE~~~~g~fry~---~~~y~~ai~li~sGki~~k~lIT~r 325 (354)
T KOG0024|consen 252 AEVTIRAAIKATRSG-GTVVLVGMGA--EEIQFPIIDVALKEVDLRGSFRYC---NGDYPTAIELVSSGKIDVKPLITHR 325 (354)
T ss_pred chHHHHHHHHHhccC-CEEEEeccCC--CccccChhhhhhheeeeeeeeeec---cccHHHHHHHHHcCCcCchhheecc
Confidence 998899999999999 9999998654 466788888888999999996332 4589999999999999999999999
Q ss_pred cccccHHHHHHHHhcCCe--eEEEEeeCC
Q 025101 232 MKFEEINSAFDLLIKGKC--LRCVIWMGE 258 (258)
Q Consensus 232 ~~~~~~~~a~~~~~~~~~--~k~vi~~~~ 258 (258)
|+++++.+||+.+.+++. +|+++..++
T Consensus 326 ~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 326 YKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred cccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 999999999999988774 499998764
No 3
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.7e-40 Score=256.62 Aligned_cols=250 Identities=57% Similarity=1.034 Sum_probs=230.1
Q ss_pred CCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHH
Q 025101 4 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSI 83 (258)
Q Consensus 4 ~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~ 83 (258)
+|.++|. ..|+.++.|.+-.+|+||.+++...+.++++..+++.++++.|...|+|.|.++.+++++|+++.|+|.|++
T Consensus 126 DgtSRF~-~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~V 204 (375)
T KOG0022|consen 126 DGTSRFT-CKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGV 204 (375)
T ss_pred CCceeee-eCCCceEEecccccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchH
Confidence 4555554 456666666655699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhh
Q 025101 84 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC 163 (258)
Q Consensus 84 G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l 163 (258)
|+++++-+|..|++++|++|-+++|.+.++++|++..+|+.++ ...+.+.|.+++++++|+-|||+|+..++++++.+.
T Consensus 205 GLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~-~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~ 283 (375)
T KOG0022|consen 205 GLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDL-KKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESC 283 (375)
T ss_pred HHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhc-cccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999853 236889999999999999999999999999999999
Q ss_pred hcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHH
Q 025101 164 RKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDL 243 (258)
Q Consensus 164 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~ 243 (258)
..++|+-+.+|.....+..++.++.++. +.++.|+.++.+..+.+++.+++.+.++.+.++.+++|++||+++++||+.
T Consensus 284 h~GwG~sv~iGv~~~~~~i~~~p~~l~~-GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~l 362 (375)
T KOG0022|consen 284 HKGWGKSVVIGVAAAGQEISTRPFQLVT-GRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDL 362 (375)
T ss_pred hcCCCeEEEEEecCCCcccccchhhhcc-ccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHH
Confidence 9998999999998888888888888777 899999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeeEEEEee
Q 025101 244 LIKGKCLRCVIWM 256 (258)
Q Consensus 244 ~~~~~~~k~vi~~ 256 (258)
|.+++.+|.|+.+
T Consensus 363 l~~GksiR~vl~~ 375 (375)
T KOG0022|consen 363 LHEGKSIRCVLWM 375 (375)
T ss_pred HhCCceEEEEEeC
Confidence 9999999888864
No 4
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=7.4e-40 Score=258.72 Aligned_cols=249 Identities=45% Similarity=0.846 Sum_probs=231.6
Q ss_pred CCCCCccccCCCCceee----------------------------eeccccceeeeEEEecceEEEcCCCCCccchhhcc
Q 025101 2 PRDQTSRFKDLRGETIH----------------------------HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLS 53 (258)
Q Consensus 2 ~~~~~~~~~~~~G~~v~----------------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~ 53 (258)
..||.|++| +.|..++ .+.+.++|+||.++++..++|++++.+++.++++.
T Consensus 89 p~CG~C~~C-~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llG 167 (366)
T COG1062 89 PECGQCKFC-LSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLG 167 (366)
T ss_pred CCCCCCchh-hCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCCccceEEEe
Confidence 369999999 8898775 12223589999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCc-cHH
Q 025101 54 CGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK-SVS 132 (258)
Q Consensus 54 ~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~-~~~ 132 (258)
|...|.+.+..+.+++++|+++.|+|.|++|++++|-|+..|+.++++++.+++|+++++++|+++++|.++ . ++.
T Consensus 168 CgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~---~~~vv 244 (366)
T COG1062 168 CGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE---VDDVV 244 (366)
T ss_pred eeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchh---hhhHH
Confidence 999999999899999999999999999999999999999999999999999999999999999999999998 5 699
Q ss_pred HHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHH
Q 025101 133 QIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPI 212 (258)
Q Consensus 133 ~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (258)
+.+.+++++++|++|||+|+..++++++.++.++ |+.+.+|........++++..+... .+++|+.++....+.+++.
T Consensus 245 ~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~-G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~~~p~~diP~ 322 (366)
T COG1062 245 EAIVELTDGGADYAFECVGNVEVMRQALEATHRG-GTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGGARPRSDIPR 322 (366)
T ss_pred HHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcC-CeEEEEecCCCCceeecChHHeecc-ceEEEEeecCCccccchhH
Confidence 9999999989999999999999999999999998 9999999888777788888888874 9999999998888999999
Q ss_pred HHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEEEee
Q 025101 213 LLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 256 (258)
Q Consensus 213 ~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 256 (258)
+++++.+|++++.+++++.++++|+++||+.+++++.+|.||.+
T Consensus 323 lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 323 LVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred HHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 99999999999999999999999999999999999999888864
No 5
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=3.1e-39 Score=265.72 Aligned_cols=243 Identities=22% Similarity=0.331 Sum_probs=206.2
Q ss_pred CCCCccccCCCCceeeeec---cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEc
Q 025101 3 RDQTSRFKDLRGETIHHFV---SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG 79 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~---~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G 79 (258)
|+++..|. +||+|+.+. ..|+|+||+.+|++.++++|+++++++||++++++.|||++|....++++|++|||+|
T Consensus 73 G~~V~~~~--~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~g 150 (326)
T COG0604 73 GSGVTGFK--VGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHG 150 (326)
T ss_pred CCCCCCcC--CCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEec
Confidence 67888887 999999774 5799999999999999999999999999999999999999999889999999999998
Q ss_pred c-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHH
Q 025101 80 L-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQ 157 (258)
Q Consensus 80 ~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~ 157 (258)
+ |++|++++|+||.+|+ .++++++++++.++++++|+++++++++ +++.+.+++++++ ++|+|||++|+.. +.
T Consensus 151 aaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~---~~~~~~v~~~t~g~gvDvv~D~vG~~~-~~ 225 (326)
T COG0604 151 AAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYRE---EDFVEQVRELTGGKGVDVVLDTVGGDT-FA 225 (326)
T ss_pred CCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc---ccHHHHHHHHcCCCCceEEEECCCHHH-HH
Confidence 5 9999999999999998 7777777888888999999999999999 8899999999998 9999999999988 88
Q ss_pred HHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCC---CCCCcHHHHHHHHHcCCCCCCccccccccc
Q 025101 158 EAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL---KAKSDIPILLKRYMDKELELDKFVTHEMKF 234 (258)
Q Consensus 158 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 234 (258)
.+++.++++ |+++.+|...+....+++...++.+.++..+...... ...+.+.++.+++.+|.++ +.+..+||+
T Consensus 226 ~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~--~~i~~~~~l 302 (326)
T COG0604 226 ASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLK--PVIDRVYPL 302 (326)
T ss_pred HHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCc--ceeccEech
Confidence 999999999 9999999776323444556666777888888765432 1134577789999999555 458789999
Q ss_pred ccHHHHHH--HHhcCCee-EEEEee
Q 025101 235 EEINSAFD--LLIKGKCL-RCVIWM 256 (258)
Q Consensus 235 ~~~~~a~~--~~~~~~~~-k~vi~~ 256 (258)
++...+.. .++ ++.. |+|+++
T Consensus 303 ~e~~~a~a~~~~~-~~~~GKvvl~~ 326 (326)
T COG0604 303 AEAPAAAAHLLLE-RRTTGKVVLKV 326 (326)
T ss_pred hhhHHHHHHHHcc-cCCcceEEEeC
Confidence 99544444 444 3555 999874
No 6
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1e-37 Score=263.36 Aligned_cols=226 Identities=36% Similarity=0.657 Sum_probs=201.6
Q ss_pred cceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEc
Q 025101 24 SSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 103 (258)
Q Consensus 24 g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~ 103 (258)
|+|+||+.+|++.++++|+++++++++.+++++.|||+++.+...+++|++|||+|+|++|++++|+++..|+.+|++++
T Consensus 144 G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~ 223 (371)
T cd08281 144 SAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVD 223 (371)
T ss_pred ccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEc
Confidence 68999999999999999999999999999999999999887788899999999999999999999999999996699999
Q ss_pred CCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCcee
Q 025101 104 VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS 183 (258)
Q Consensus 104 ~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 183 (258)
++++|.++++++|++.++++.+ +++.+.+++.+++++|++|||+|.+.++..++++++++ |+++.+|........+
T Consensus 224 ~~~~r~~~a~~~Ga~~~i~~~~---~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~ 299 (371)
T cd08281 224 LNEDKLALARELGATATVNAGD---PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLS 299 (371)
T ss_pred CCHHHHHHHHHcCCceEeCCCc---hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceee
Confidence 9999999999999999999887 78888888887668999999999877799999999999 9999999754333456
Q ss_pred echHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEE
Q 025101 184 LSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCV 253 (258)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~v 253 (258)
++...++.+++++.|++.+.+..+.++.++++++.+|++++.++++++|+++++++||+.+.+++..|.|
T Consensus 300 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~v 369 (371)
T cd08281 300 VPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQV 369 (371)
T ss_pred ecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeee
Confidence 6777788899999998766544456789999999999999888899999999999999999998887444
No 7
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=2e-37 Score=260.58 Aligned_cols=229 Identities=35% Similarity=0.605 Sum_probs=202.3
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|+||+.+|+..++++|+++++++++.+++++.+||+++.+...+++|++|||+|+|++|++++|+|+..|+.+|+++
T Consensus 128 ~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~ 207 (358)
T TIGR03451 128 IGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAV 207 (358)
T ss_pred cccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 48999999999999999999999999999999999999887778889999999999999999999999999999569999
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCc
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 181 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 181 (258)
+++++|.++++++|++.++++++ +++.+.+++.+++ ++|+||||+|++.++..+++.++++ |+++.+|.......
T Consensus 208 ~~~~~~~~~~~~~Ga~~~i~~~~---~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~ 283 (358)
T TIGR03451 208 DIDDRKLEWAREFGATHTVNSSG---TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMT 283 (358)
T ss_pred cCCHHHHHHHHHcCCceEEcCCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCce
Confidence 99999999999999999999887 7888889888877 8999999999877799999999999 99999997644334
Q ss_pred eeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEEEe
Q 025101 182 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 255 (258)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 255 (258)
.+++...++.+++++.+++.+.......++++++++.+|.+++.++++++|+++++++||+.+++++..|+++.
T Consensus 284 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 357 (358)
T TIGR03451 284 LELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVE 357 (358)
T ss_pred eeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEe
Confidence 55666677888999998865433335678899999999999888889999999999999999998877788875
No 8
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.3e-37 Score=235.60 Aligned_cols=244 Identities=18% Similarity=0.256 Sum_probs=208.8
Q ss_pred CCCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-C
Q 025101 3 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-G 81 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g 81 (258)
|+|++++. .||+|.-...+|.|+|++.+|...++++|+.+++++|+++...++|||.-+++..++++|++||++.+ |
T Consensus 80 G~gvtdrk--vGDrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAG 157 (336)
T KOG1197|consen 80 GEGVTDRK--VGDRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAG 157 (336)
T ss_pred cCCccccc--cccEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccc
Confidence 67899998 99999977789999999999999999999999999999999999999999999999999999999964 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHH
Q 025101 82 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAY 160 (258)
Q Consensus 82 ~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~ 160 (258)
++|++++|++|..|+ .++++..+.+|.+.+++.|+++.|+++. +++.+++++++++ |+|+++|.+|..+ +..++
T Consensus 158 GVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~---eD~v~~V~kiTngKGVd~vyDsvG~dt-~~~sl 232 (336)
T KOG1197|consen 158 GVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST---EDYVDEVKKITNGKGVDAVYDSVGKDT-FAKSL 232 (336)
T ss_pred cHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc---hhHHHHHHhccCCCCceeeeccccchh-hHHHH
Confidence 999999999999999 8999999999999999999999999999 9999999999988 9999999999988 99999
Q ss_pred HhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCC-CCCC----cHHHHHHHHHcCCCCCCcccccccccc
Q 025101 161 ACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL-KAKS----DIPILLKRYMDKELELDKFVTHEMKFE 235 (258)
Q Consensus 161 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~ 235 (258)
++|++. |+++.+|..++. ..+++...+..|.+++...+.-.+ ..+. ...+++.++.+|.+++. +.++||++
T Consensus 233 ~~Lk~~-G~mVSfG~asgl-~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls 308 (336)
T KOG1197|consen 233 AALKPM-GKMVSFGNASGL-IDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLS 308 (336)
T ss_pred HHhccC-ceEEEeccccCC-CCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchH
Confidence 999999 999999976652 223333344444554433321111 1122 34467778888966655 99999999
Q ss_pred cHHHHHHHHhcCCee-EEEEeeC
Q 025101 236 EINSAFDLLIKGKCL-RCVIWMG 257 (258)
Q Consensus 236 ~~~~a~~~~~~~~~~-k~vi~~~ 257 (258)
++.+|+..+++++.. |+++.+.
T Consensus 309 ~vadA~~diesrktvGkvlLlp~ 331 (336)
T KOG1197|consen 309 KVADAHADIESRKTVGKVLLLPG 331 (336)
T ss_pred HHHHHHHHHHhhhccceEEEeCC
Confidence 999999999999888 9998764
No 9
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=1.9e-36 Score=255.20 Aligned_cols=232 Identities=46% Similarity=0.925 Sum_probs=194.3
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|+||+++|++.++++|+++++++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+||.+|+.+|+++
T Consensus 137 ~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~ 216 (368)
T TIGR02818 137 CSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAI 216 (368)
T ss_pred CccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 36999999999999999999999999999999999999998778899999999999999999999999999998679999
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCce
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 182 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 182 (258)
++++++.++++++|++.++|+.+ ..+++.+.+++++++++|++|||+|.+.++..+++++++++|+++.+|........
T Consensus 217 ~~~~~~~~~a~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~ 295 (368)
T TIGR02818 217 DINPAKFELAKKLGATDCVNPND-YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEI 295 (368)
T ss_pred cCCHHHHHHHHHhCCCeEEcccc-cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcc
Confidence 99999999999999999998764 11456677877776689999999998777999999998732999999975432333
Q ss_pred eechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEEEee
Q 025101 183 SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 256 (258)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 256 (258)
++....++. +..+.++..+....+.++.++++++.+|++++.++++++|+++++++|++.+++++..|++|.+
T Consensus 296 ~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 296 STRPFQLVT-GRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred cccHHHHhc-cceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 444444443 4456776544333345789999999999998888999999999999999999888767999875
No 10
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=3.5e-36 Score=254.79 Aligned_cols=232 Identities=53% Similarity=0.945 Sum_probs=197.8
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|+||+++|++.++++|+++++++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|+++
T Consensus 150 ~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~ 229 (381)
T PLN02740 150 TSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGV 229 (381)
T ss_pred CccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEE
Confidence 48999999999999999999999999999999999999988778899999999999999999999999999998669999
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCce
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 182 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 182 (258)
+++++|.++++++|++.++|+++ ..+++.+.+++.+++++|++||++|.+.++..++.++++++|+++.+|.......+
T Consensus 230 ~~~~~r~~~a~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~ 308 (381)
T PLN02740 230 DINPEKFEKGKEMGITDFINPKD-SDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKML 308 (381)
T ss_pred cCChHHHHHHHHcCCcEEEeccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCcee
Confidence 99999999999999999998775 11247778888776689999999998777999999998833999999976443233
Q ss_pred eechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEEEee
Q 025101 183 SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 256 (258)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 256 (258)
+++...++ ++.++.|+..+.+....+++++++++.++.+++.++++++|+++++++|++.+.+++..|++|+.
T Consensus 309 ~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 309 PLHPMELF-DGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred cccHHHHh-cCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 44443333 58899988766554445789999999999998888899999999999999999988877999863
No 11
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.7e-35 Score=249.95 Aligned_cols=231 Identities=54% Similarity=0.975 Sum_probs=197.2
Q ss_pred cceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEc
Q 025101 24 SSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 103 (258)
Q Consensus 24 g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~ 103 (258)
|+|+||+.+|+..++++|+++++++++.+++++.++|+++....++++|++|||+|+|++|++++|+++.+|+..|++++
T Consensus 146 G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~ 225 (378)
T PLN02827 146 SSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVD 225 (378)
T ss_pred ccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEC
Confidence 79999999999999999999999999999888899998877778899999999999999999999999999985688888
Q ss_pred CCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCcee
Q 025101 104 VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS 183 (258)
Q Consensus 104 ~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 183 (258)
+++++.++++++|++.++++++ ..+++.+.+++.+++++|+|||++|....+..+++.+++++|+++.+|..... ..
T Consensus 226 ~~~~~~~~a~~lGa~~~i~~~~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~--~~ 302 (378)
T PLN02827 226 INPEKAEKAKTFGVTDFINPND-LSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK--PE 302 (378)
T ss_pred CCHHHHHHHHHcCCcEEEcccc-cchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC--cc
Confidence 8999999999999999998765 11357777887776689999999998766899999998843899999975432 22
Q ss_pred ech-HHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEEEeeC
Q 025101 184 LSS-FEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMG 257 (258)
Q Consensus 184 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~~ 257 (258)
+.. ..++.+++++.|+..+.+....++.++++++.+|++++.++++++|+++++.+|++.+++++..|+||.+.
T Consensus 303 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~ 377 (378)
T PLN02827 303 VSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP 377 (378)
T ss_pred ccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence 322 34667899999987655444567889999999999988778999999999999999999988789999875
No 12
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1e-35 Score=248.59 Aligned_cols=223 Identities=26% Similarity=0.432 Sum_probs=193.9
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|+||+.+|++.++++|+++++++++++++++.|||+++ ....+++|++|||+|+|++|++++|+++.+|+++|+++
T Consensus 116 ~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~ 194 (339)
T cd08239 116 DGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGV 194 (339)
T ss_pred CCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 58999999999999999999999999999999999999987 56788899999999999999999999999999449999
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCc
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 181 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 181 (258)
++++++.++++++|++.++++++ ++ .+.+.+.+++ ++|+||||+|+...+..++++++++ |+++.+|.... ..
T Consensus 195 ~~~~~~~~~~~~~ga~~~i~~~~---~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~ 268 (339)
T cd08239 195 DPSPERLELAKALGADFVINSGQ---DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LT 268 (339)
T ss_pred CCCHHHHHHHHHhCCCEEEcCCc---ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cc
Confidence 99999999999999999999877 55 6778787777 8999999999988678999999999 99999996543 22
Q ss_pred eeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEEEee
Q 025101 182 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 256 (258)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 256 (258)
.. ....++.+++++.+++... .++++++++++.+|.+++.++++++|+++++++||+.++++...|+|+++
T Consensus 269 ~~-~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 269 IE-VSNDLIRKQRTLIGSWYFS---VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred cC-cHHHHHhCCCEEEEEecCC---HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 22 1234677899999986543 46799999999999988888899999999999999999887655999875
No 13
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.7e-35 Score=249.67 Aligned_cols=231 Identities=47% Similarity=0.933 Sum_probs=194.9
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|+||+.++++.++++|+++++++++++++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+.+|+++
T Consensus 138 ~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~ 217 (368)
T cd08300 138 TSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGI 217 (368)
T ss_pred cccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 36899999999999999999999999999999999999988777889999999999999999999999999999669999
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCce
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 182 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 182 (258)
++++++.++++++|+++++|+++ .++++.+.+++++++++|+|||++|++..+..+++++++++|+++.+|........
T Consensus 218 ~~~~~~~~~~~~lGa~~~i~~~~-~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~ 296 (368)
T cd08300 218 DINPDKFELAKKFGATDCVNPKD-HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEI 296 (368)
T ss_pred eCCHHHHHHHHHcCCCEEEcccc-cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCcc
Confidence 99999999999999999998876 11257788888876689999999998766999999998733999999965432233
Q ss_pred eechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEEEe
Q 025101 183 SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 255 (258)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 255 (258)
..+...+.. ..++.++..+.+..+.+++++++++.+|++++.++++++|+++++.+||+.+.+++..|++++
T Consensus 297 ~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 297 STRPFQLVT-GRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred ccCHHHHhh-cCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 334444433 456677665555456788999999999999888889999999999999999998877799875
No 14
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.3e-35 Score=248.11 Aligned_cols=240 Identities=16% Similarity=0.238 Sum_probs=196.6
Q ss_pred CCCCCccccCCCCceee-------ee-----ccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCC
Q 025101 2 PRDQTSRFKDLRGETIH-------HF-----VSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANV 69 (258)
Q Consensus 2 ~~~~~~~~~~~~G~~v~-------~~-----~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~ 69 (258)
.+||.|.+| +.|...+ +. ...|+|+||+++|++.++++|+++++++++.. .++++||+++. ....
T Consensus 91 ~~cg~c~~c-~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~al~-~~~~ 167 (343)
T PRK09880 91 KPCGHCKYC-LSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFA-EPLAVAIHAAH-QAGD 167 (343)
T ss_pred CCCcCChhh-cCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHhh-cHHHHHHHHHH-hcCC
Confidence 357777777 6565432 21 12589999999999999999999998776644 47889999874 4556
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEe
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 149 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~ 149 (258)
.+|++|+|+|+|++|++++|+++.+|+++|+++++++++.++++++|+++++|+++ +++.+ +.+. .+++|+||||
T Consensus 168 ~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~---~~~~~-~~~~-~g~~D~vid~ 242 (343)
T PRK09880 168 LQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN---DDLDH-YKAE-KGYFDVSFEV 242 (343)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc---ccHHH-Hhcc-CCCCCEEEEC
Confidence 68999999999999999999999999967999999999999999999999999877 55443 2222 2369999999
Q ss_pred cCChhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccc
Q 025101 150 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVT 229 (258)
Q Consensus 150 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 229 (258)
+|.+.++..+++.++++ |+++.+|.... ..+++...++.+++++.++... .++++++++++.+|++++.++++
T Consensus 243 ~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~ 315 (343)
T PRK09880 243 SGHPSSINTCLEVTRAK-GVMVQVGMGGA--PPEFPMMTLIVKEISLKGSFRF----TEEFNTAVSWLANGVINPLPLLS 315 (343)
T ss_pred CCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCccCHHHHHhCCcEEEEEeec----cccHHHHHHHHHcCCCCchhheE
Confidence 99877789999999999 99999996432 3456666778889999988632 36799999999999998888899
Q ss_pred cccccccHHHHHHHHhcCCee-EEEEee
Q 025101 230 HEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 230 ~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
++|+++++++|++.+.+++.. |+++.+
T Consensus 316 ~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 316 AEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred EEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 999999999999999887655 999874
No 15
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=3.6e-35 Score=247.90 Aligned_cols=228 Identities=56% Similarity=1.016 Sum_probs=196.8
Q ss_pred cceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEc
Q 025101 24 SSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 103 (258)
Q Consensus 24 g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~ 103 (258)
|+|+||+++|+..++++|+++++++++++++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++
T Consensus 140 G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~ 219 (369)
T cd08301 140 STFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVD 219 (369)
T ss_pred ccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEc
Confidence 78999999999999999999999999999999999999887788999999999999999999999999999986799999
Q ss_pred CCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhc-CCceEEEecccCCCCce
Q 025101 104 VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK-GWGKTIVLGVDQPGSQL 182 (258)
Q Consensus 104 ~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~-~~G~~v~~g~~~~~~~~ 182 (258)
+++++.++++++|++.++++.+ ..+++.+.+++.+++++|++||++|....+..++.++++ + |+++.+|........
T Consensus 220 ~~~~~~~~~~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~-g~~v~~g~~~~~~~~ 297 (369)
T cd08301 220 LNPSKFEQAKKFGVTEFVNPKD-HDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGW-GVTVLLGVPHKDAVF 297 (369)
T ss_pred CCHHHHHHHHHcCCceEEcccc-cchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCC-CEEEEECcCCCCccc
Confidence 9999999999999998888764 113466777777766899999999988778999999999 6 999999976533344
Q ss_pred eechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEEE
Q 025101 183 SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 254 (258)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi 254 (258)
+++...++ +++++.|+..+.+..+.+++++++++.++.+++.++++++|+++++++||+.+++++..|+++
T Consensus 298 ~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~ 368 (369)
T cd08301 298 STHPMNLL-NGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCIL 368 (369)
T ss_pred ccCHHHHh-cCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEe
Confidence 45544444 589999987666554567899999999999888888899999999999999999998888887
No 16
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=1.8e-34 Score=243.22 Aligned_cols=229 Identities=50% Similarity=0.926 Sum_probs=195.8
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|+||+.++++.++++|+++++++++++++++.|||+++.+..++++|++|||+|+|++|++++|+++.+|+.+|+++
T Consensus 136 ~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~ 215 (365)
T cd08277 136 TSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGV 215 (365)
T ss_pred cccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 47899999999999999999999999999999999999988778889999999999999999999999999998679999
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhc-CCceEEEecccCCCCc
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK-GWGKTIVLGVDQPGSQ 181 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~-~~G~~v~~g~~~~~~~ 181 (258)
++++++.++++++|++++++..+ ...++.+.+++.+++++|+||||+|....+..+++++++ + |+++.+|...+ ..
T Consensus 216 ~~~~~~~~~~~~~ga~~~i~~~~-~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~-~~ 292 (365)
T cd08277 216 DINEDKFEKAKEFGATDFINPKD-SDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGW-GVSVVVGVPPG-AE 292 (365)
T ss_pred eCCHHHHHHHHHcCCCcEecccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCC-CEEEEEcCCCc-cc
Confidence 99999999999999999998765 112356677777766899999999987768999999987 6 99999996542 23
Q ss_pred eeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEEEe
Q 025101 182 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 255 (258)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 255 (258)
.+++...++. ++++.+++.+.+..+.+++++++++.++.++++++++++|+++++++|++.+++++..|+++.
T Consensus 293 ~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 293 LSIRPFQLIL-GRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred cccCHhHHhh-CCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 3445555554 889988876665445678999999999998888899999999999999999988876698873
No 17
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.7e-35 Score=229.14 Aligned_cols=240 Identities=23% Similarity=0.351 Sum_probs=206.0
Q ss_pred CCCCCccccCCCCceee--------------eeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhc
Q 025101 2 PRDQTSRFKDLRGETIH--------------HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 67 (258)
Q Consensus 2 ~~~~~~~~~~~~G~~v~--------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~ 67 (258)
.+|+.|.+| ..|...+ +...+|+||+|+++++.+++++|++++.++||.+.|+..|+|.+| ...
T Consensus 100 ~sC~~CE~C-~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~ 177 (360)
T KOG0023|consen 100 GSCLSCEYC-KSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPL-KRS 177 (360)
T ss_pred ccccCcccc-ccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehh-HHc
Confidence 468888888 7777664 112336699999999999999999999999999999999999987 677
Q ss_pred CCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCc-chHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEE
Q 025101 68 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYC 146 (258)
Q Consensus 68 ~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v 146 (258)
++.+|+++.|.|+|++|++++|+||++|. +|+++++++ +|.+.++.+|++..++..+ ++++.+.+.+.+++++|-|
T Consensus 178 g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~--d~d~~~~~~~~~dg~~~~v 254 (360)
T KOG0023|consen 178 GLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTE--DPDIMKAIMKTTDGGIDTV 254 (360)
T ss_pred CCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecC--CHHHHHHHHHhhcCcceee
Confidence 88899999999997799999999999999 999999998 5666778899999888883 2889999988777666666
Q ss_pred EEecCChhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCc
Q 025101 147 FECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDK 226 (258)
Q Consensus 147 ~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 226 (258)
.+- ....++.++.+++++ |+++++|.... +..++.+.+..+.+.+.|+..+. +.+.++++++..++.++..
T Consensus 255 ~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~~~I~GS~vG~---~ket~E~Ldf~a~~~ik~~- 325 (360)
T KOG0023|consen 255 SNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGRKSIKGSIVGS---RKETQEALDFVARGLIKSP- 325 (360)
T ss_pred eec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcccEEEEeecccc---HHHHHHHHHHHHcCCCcCc-
Confidence 655 555589999999999 99999997643 66777778888899999998877 6889999999999966655
Q ss_pred ccccccccccHHHHHHHHhcCCee-EEEEeeC
Q 025101 227 FVTHEMKFEEINSAFDLLIKGKCL-RCVIWMG 257 (258)
Q Consensus 227 ~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~~ 257 (258)
+ +..+++++++||+.+++++.. |.|+++.
T Consensus 326 -I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 326 -I-ELVKLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred -e-EEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 5 889999999999999999988 9999874
No 18
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=4.5e-34 Score=239.34 Aligned_cols=228 Identities=20% Similarity=0.287 Sum_probs=190.5
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|+||+.+|++.++++|+++++++++.+. ++.++++++ ....+++|++|||+|+|++|++++|+|+..|++.|+++
T Consensus 114 ~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~ 191 (347)
T PRK10309 114 DGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAI 191 (347)
T ss_pred CCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 5899999999999999999999999998875 566788874 66788899999999999999999999999999557889
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCC-EEEEecCChhhHHHHHHhhhcCCceEEEecccCCCC
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GAD-YCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 180 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d-~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 180 (258)
++++++.+.++++|++.++++++ .+ .+.+.+.+++ ++| ++|||+|.+.++..+++.++++ |+++.+|......
T Consensus 192 ~~~~~~~~~~~~~Ga~~~i~~~~---~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~ 266 (347)
T PRK10309 192 DINSEKLALAKSLGAMQTFNSRE---MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDL 266 (347)
T ss_pred CCCHHHHHHHHHcCCceEecCcc---cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCc
Confidence 99999999999999999998876 44 5567777766 898 9999999987799999999999 9999999764321
Q ss_pred ceee-chHHHHhcCceEEecccCCCC--CCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEee
Q 025101 181 QLSL-SSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 181 ~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
..+. ....++.+++++.|++.+... .+++++++++++.+|.++++++++++|+++++++|++.+.+++.. |+++++
T Consensus 267 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 267 HLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred ccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 1211 123467789999998654221 136788999999999998888999999999999999999888766 999976
Q ss_pred C
Q 025101 257 G 257 (258)
Q Consensus 257 ~ 257 (258)
.
T Consensus 347 ~ 347 (347)
T PRK10309 347 P 347 (347)
T ss_pred C
Confidence 3
No 19
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=3.8e-34 Score=238.50 Aligned_cols=246 Identities=26% Similarity=0.355 Sum_probs=202.9
Q ss_pred CCCCCccccCCCCceeeee-------c-----cccceeeeEEEecceEE-EcCCCCCccchhhcchhhhhhhhhhhhhcC
Q 025101 2 PRDQTSRFKDLRGETIHHF-------V-----SVSSFSEYTVLDIAHVV-KVDPTVPPNRACLLSCGVSTGVGAAWRTAN 68 (258)
Q Consensus 2 ~~~~~~~~~~~~G~~v~~~-------~-----~~g~~~~~~~v~~~~~~-~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~ 68 (258)
.+||.|++| +.|.+.+.- . ..|+|+||+.+|+++++ ++|++++ .+++++..++++++++......
T Consensus 88 ~~Cg~C~~C-~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~-~~~aal~epla~~~~~~a~~~~ 165 (350)
T COG1063 88 IPCGHCRYC-RAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGID-EEAAALTEPLATAYHGHAERAA 165 (350)
T ss_pred cCCCCChhH-hCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCC-hhhhhhcChhhhhhhhhhhccC
Confidence 579999999 999986511 1 24899999999976555 5588875 4444555599999887445555
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCceEEcCCCCCCccHHHHHHHhcCC-CCCEE
Q 025101 69 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYC 146 (258)
Q Consensus 69 ~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v 146 (258)
..++.+|+|+|+|++|++++++++..|+++|++++.+++|++++++ .|++.+++..+ ++....+.+.+++ ++|++
T Consensus 166 ~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~---~~~~~~~~~~t~g~g~D~v 242 (350)
T COG1063 166 VRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE---DDAGAEILELTGGRGADVV 242 (350)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc---ccHHHHHHHHhCCCCCCEE
Confidence 5666699999999999999999999999899999999999999999 66776666665 4677888899988 99999
Q ss_pred EEecCChhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCc
Q 025101 147 FECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDK 226 (258)
Q Consensus 147 ~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 226 (258)
|||+|.+.++.++++.++++ |+++.+|....... .++...++.|++++.|+... ..+.+++.+++++++|++++.+
T Consensus 243 ie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~~--~~~~~~~~~~~ll~~g~i~~~~ 318 (350)
T COG1063 243 IEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLRP--SGREDFERALDLLASGKIDPEK 318 (350)
T ss_pred EECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccCC--CCcccHHHHHHHHHcCCCChhH
Confidence 99999988899999999999 99999998765432 56667789999999998421 2246899999999999999999
Q ss_pred ccccccccccHHHHHHHHhcCCe--eEEEEee
Q 025101 227 FVTHEMKFEEINSAFDLLIKGKC--LRCVIWM 256 (258)
Q Consensus 227 ~~~~~~~~~~~~~a~~~~~~~~~--~k~vi~~ 256 (258)
++++.++++++++||+.+.+++. .|+++.+
T Consensus 319 lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 319 LITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred ceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 99999999999999999987553 4999864
No 20
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=6.1e-34 Score=238.15 Aligned_cols=243 Identities=19% Similarity=0.274 Sum_probs=198.9
Q ss_pred CCCCccccCCCCceeeeeccccceeeeEEEecce--EEE--cCCCCCcc-chhhcchhhhhhhhhhhhhcCCCCCCEEEE
Q 025101 3 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH--VVK--VDPTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVI 77 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~--~~~--~p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI 77 (258)
++++.+|+ +||+|+++ |+|+||+.+++.. +.+ +|++++++ +++++++++.|||+++.....+++|++|||
T Consensus 90 g~~v~~~~--~Gd~V~~~---~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV 164 (348)
T PLN03154 90 DSDDPNFK--PGDLISGI---TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFV 164 (348)
T ss_pred ecCCCCCC--CCCEEEec---CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEE
Confidence 45667787 99999864 6899999998853 544 59999986 688899999999999877888999999999
Q ss_pred Ecc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhh
Q 025101 78 FGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASL 155 (258)
Q Consensus 78 ~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~ 155 (258)
+|+ |++|++++|+||.+|+ +|+++++++++.++++ ++|++.++|+++ ..++.+.+++.+++++|++||++|+..
T Consensus 165 ~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvD~v~d~vG~~~- 240 (348)
T PLN03154 165 SAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPEGIDIYFDNVGGDM- 240 (348)
T ss_pred ecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCCCcEEEEECCCHHH-
Confidence 997 9999999999999999 8999999999999987 799999999875 136777888776558999999999865
Q ss_pred HHHHHHhhhcCCceEEEecccCCCCc----eeechHHHHhcCceEEecccCCCC--CCCcHHHHHHHHHcCCCCCCcccc
Q 025101 156 VQEAYACCRKGWGKTIVLGVDQPGSQ----LSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVT 229 (258)
Q Consensus 156 ~~~~~~~l~~~~G~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~ 229 (258)
+..++++++++ |+++.+|...+... ..++...++.+++++.|+..+.+. ..+.++++++++++|++++ .+.
T Consensus 241 ~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~--~~~ 317 (348)
T PLN03154 241 LDAALLNMKIH-GRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVY--IED 317 (348)
T ss_pred HHHHHHHhccC-CEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccC--cee
Confidence 99999999999 99999996543210 012445567789999987643321 1245778999999997764 366
Q ss_pred cccccccHHHHHHHHhcCCee-EEEEeeC
Q 025101 230 HEMKFEEINSAFDLLIKGKCL-RCVIWMG 257 (258)
Q Consensus 230 ~~~~~~~~~~a~~~~~~~~~~-k~vi~~~ 257 (258)
.+|+++++.+|++.+++++.. |+|+++.
T Consensus 318 ~~~~L~~~~~A~~~l~~g~~~GKvVl~~~ 346 (348)
T PLN03154 318 MSEGLESAPAALVGLFSGKNVGKQVIRVA 346 (348)
T ss_pred cccCHHHHHHHHHHHHcCCCCceEEEEec
Confidence 789999999999999999887 9999875
No 21
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.1e-33 Score=237.04 Aligned_cols=245 Identities=21% Similarity=0.292 Sum_probs=203.8
Q ss_pred CCCCCccccCCCCceee-------eeccccceeeeEEEecceEEEcCC------CCCccchhhcchhhhhhhhhhhhhcC
Q 025101 2 PRDQTSRFKDLRGETIH-------HFVSVSSFSEYTVLDIAHVVKVDP------TVPPNRACLLSCGVSTGVGAAWRTAN 68 (258)
Q Consensus 2 ~~~~~~~~~~~~G~~v~-------~~~~~g~~~~~~~v~~~~~~~~p~------~~~~~~aa~~~~~~~ta~~~l~~~~~ 68 (258)
.+|+.|.+| +.|...+ +....|+|+||+.+|++.++++|+ ++++++++.+++++.+||+++. ...
T Consensus 86 ~~cg~c~~c-~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~-~~~ 163 (349)
T TIGR03201 86 IPCGECELC-KTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QAG 163 (349)
T ss_pred CCCCCChhh-hCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH-hcC
Confidence 468888887 6666543 222358999999999999999999 8999999999999999999874 578
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCC---
Q 025101 69 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GAD--- 144 (258)
Q Consensus 69 ~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d--- 144 (258)
+++|++|+|+|+|++|++++|+|+..|+ +|+++++++++.++++++|++.++++.+.+.+++.+.+++.+++ ++|
T Consensus 164 ~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~ 242 (349)
T TIGR03201 164 LKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTG 242 (349)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCc
Confidence 8999999999999999999999999999 89999999999999999999999987662223577778888876 776
Q ss_pred -EEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCC
Q 025101 145 -YCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELE 223 (258)
Q Consensus 145 -~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 223 (258)
+||||+|+...++.++++++++ |+++.+|.... ..+++...++.++.++.+++... ..+++++++++++|.++
T Consensus 243 d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~i~~g~i~ 316 (349)
T TIGR03201 243 WKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMA--KTEYRLSNLMAFHARALGNWGCP---PDRYPAALDLVLDGKIQ 316 (349)
T ss_pred CEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCC--CcccCHHHHhhcccEEEEEecCC---HHHHHHHHHHHHcCCCC
Confidence 8999999988788999999999 99999997643 23455566677788888876332 45799999999999988
Q ss_pred CCcccccccccccHHHHHHHHhcCCee-EEEEee
Q 025101 224 LDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 224 ~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
+.++++ +|+++++++||+.+.+++.. |+++++
T Consensus 317 ~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 317 LGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred cccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence 877774 79999999999999988766 988763
No 22
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=9.8e-34 Score=230.37 Aligned_cols=225 Identities=19% Similarity=0.286 Sum_probs=185.9
Q ss_pred CCCCCccccCCCCceee-------ee-------ccccceeeeEEEecc-eEEEcCCCCCccchhhcchhhhhhhhhhhhh
Q 025101 2 PRDQTSRFKDLRGETIH-------HF-------VSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRT 66 (258)
Q Consensus 2 ~~~~~~~~~~~~G~~v~-------~~-------~~~g~~~~~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~ 66 (258)
.+|+.|.+| +.|.... +. ...|+|+||+++|+. .++++|+++++++++.+++++.|||+++ +.
T Consensus 38 ~~cg~C~~C-~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~ 115 (280)
T TIGR03366 38 VPCGRCFRC-RRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EA 115 (280)
T ss_pred CCCCCChhh-hCcCcccCCChhhcCcccccCCccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-Hh
Confidence 357788887 6665442 11 124899999999997 6999999999999999999999999987 44
Q ss_pred cCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCE
Q 025101 67 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADY 145 (258)
Q Consensus 67 ~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~ 145 (258)
....+|++|||+|+|++|++++|+||.+|+++|++++++++|.++++++|++.++++.+ ..+.+++.+.+ ++|+
T Consensus 116 ~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~ 190 (280)
T TIGR03366 116 AGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDV 190 (280)
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCE
Confidence 55669999999999999999999999999955999999999999999999998888654 24556667666 8999
Q ss_pred EEEecCChhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcC--CCC
Q 025101 146 CFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK--ELE 223 (258)
Q Consensus 146 v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~ 223 (258)
+||++|.+..++.++++++++ |+++.+|........+++...++.|++++.|+..+. .++++++++++.++ +++
T Consensus 191 vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~ 266 (280)
T TIGR03366 191 ALEFSGATAAVRACLESLDVG-GTAVLAGSVFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFP 266 (280)
T ss_pred EEECCCChHHHHHHHHHhcCC-CEEEEeccCCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCC
Confidence 999999888799999999999 999999965433345677777888999999986433 46799999999974 677
Q ss_pred CCcccccccccccH
Q 025101 224 LDKFVTHEMKFEEI 237 (258)
Q Consensus 224 ~~~~~~~~~~~~~~ 237 (258)
+.++++++|+++++
T Consensus 267 ~~~~it~~~~l~~~ 280 (280)
T TIGR03366 267 FEELVGKPFPLADV 280 (280)
T ss_pred HHHHhhcccccccC
Confidence 77889999999874
No 23
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1e-32 Score=232.44 Aligned_cols=230 Identities=27% Similarity=0.432 Sum_probs=193.7
Q ss_pred ccceeeeEEEecc-eEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEE
Q 025101 23 VSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIG 101 (258)
Q Consensus 23 ~g~~~~~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~ 101 (258)
.|+|+||++++++ .++++|++++.++++++++++.|||+++......++|++|||+|+|++|++++++|+.+|+++|++
T Consensus 128 ~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~ 207 (361)
T cd08231 128 SGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIV 207 (361)
T ss_pred CcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEE
Confidence 4899999999996 799999999999999998899999999876666679999999999999999999999999977999
Q ss_pred EcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCC
Q 025101 102 VDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 180 (258)
Q Consensus 102 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 180 (258)
+++++++.++++++|++.++++++.+..++...+.+.+++ ++|++|||+|+...+..++++++++ |+++.+|......
T Consensus 208 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~ 286 (361)
T cd08231 208 IDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAG 286 (361)
T ss_pred EcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCC
Confidence 9999999999999999988888762222234577888877 8999999999866689999999999 9999999654333
Q ss_pred ceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcC--CCCCCcccccccccccHHHHHHHHhcCCeeEEEEee
Q 025101 181 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK--ELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 256 (258)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 256 (258)
..+++...++.+++++.+++... .+++.++++++.++ .+++.++++++|+++++++||+.++++...|++|++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 287 TVPLDPERIVRKNLTIIGVHNYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred ccccCHHHHhhcccEEEEcccCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 44555556678899999886433 46789999999988 666777888999999999999999888766999864
No 24
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=3.7e-33 Score=234.41 Aligned_cols=236 Identities=21% Similarity=0.276 Sum_probs=191.1
Q ss_pred CCCCccccCCCCceeee--------------eccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcC
Q 025101 3 RDQTSRFKDLRGETIHH--------------FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN 68 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~--------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~ 68 (258)
+|+.|.+| +.|...+. ....|+|+||+++|++.++++|+++++++++.+++.+.|||+++.....
T Consensus 102 ~Cg~C~~C-~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~ 180 (360)
T PLN02586 102 SCKSCESC-DQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGM 180 (360)
T ss_pred cCCCCccc-cCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcc
Confidence 46667777 66654421 1124899999999999999999999999999999999999998766666
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcch-HHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEE
Q 025101 69 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF 147 (258)
Q Consensus 69 ~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~-~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~ 147 (258)
+++|++|||.|+|++|++++|+|+..|+ +|++++.++++ .+.++++|++.++++++ . +.+++.++ ++|+||
T Consensus 181 ~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~---~---~~~~~~~~-~~D~vi 252 (360)
T PLN02586 181 TEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVSTD---P---EKMKAAIG-TMDYII 252 (360)
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEEEcCCC---H---HHHHhhcC-CCCEEE
Confidence 7899999999999999999999999999 78888777665 45668899999998765 2 24555444 699999
Q ss_pred EecCChhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcc
Q 025101 148 ECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKF 227 (258)
Q Consensus 148 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 227 (258)
|++|.+.+++.++++++++ |+++.+|.... ...++...++.++..+.++..+. ..+++++++++.+|++++.
T Consensus 253 d~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~-- 324 (360)
T PLN02586 253 DTVSAVHALGPLLGLLKVN-GKLITLGLPEK--PLELPIFPLVLGRKLVGGSDIGG---IKETQEMLDFCAKHNITAD-- 324 (360)
T ss_pred ECCCCHHHHHHHHHHhcCC-cEEEEeCCCCC--CCccCHHHHHhCCeEEEEcCcCC---HHHHHHHHHHHHhCCCCCc--
Confidence 9999876789999999999 99999996532 34556666677788888876443 3578999999999987643
Q ss_pred cccccccccHHHHHHHHhcCCee-EEEEee
Q 025101 228 VTHEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 228 ~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
+ ++|+++++++||+.+.+++.. |+++.+
T Consensus 325 ~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 325 I-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 4 689999999999999998876 999876
No 25
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=5e-33 Score=234.41 Aligned_cols=217 Identities=24% Similarity=0.346 Sum_probs=182.1
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcC-CCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIG 101 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~-~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~ 101 (258)
.|+|+||+++|++.++++|+++++++++.+++++.|+|+++..... .++|++|+|.|+|++|++++|+|+.+|+ +|++
T Consensus 129 ~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~ 207 (375)
T PLN02178 129 QGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTV 207 (375)
T ss_pred CCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEE
Confidence 5899999999999999999999999999999999999998754432 3689999999999999999999999999 7988
Q ss_pred EcCCcch-HHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCC
Q 025101 102 VDVISEK-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 180 (258)
Q Consensus 102 ~~~~~~~-~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 180 (258)
+++++++ .++++++|+++++++++ . +.+.+.++ ++|+||||+|.+.++..++++++++ |+++.+|....
T Consensus 208 ~~~~~~~~~~~a~~lGa~~~i~~~~---~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~-- 277 (375)
T PLN02178 208 ISRSSEKEREAIDRLGADSFLVTTD---S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEK-- 277 (375)
T ss_pred EeCChHHhHHHHHhCCCcEEEcCcC---H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCC--
Confidence 8876554 67888999999998765 2 34555544 6999999999886689999999999 99999996532
Q ss_pred ceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEee
Q 025101 181 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
...++...++.+++++.|+..+. .+++.++++++.+|++++. + ++|+++++++||+.+.+++.. |+++.+
T Consensus 278 ~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 278 PLDLPIFPLVLGRKMVGGSQIGG---MKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred CCccCHHHHHhCCeEEEEeCccC---HHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 34566667778899999986543 3578999999999977644 5 679999999999999998876 999886
No 26
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.6e-32 Score=230.28 Aligned_cols=222 Identities=23% Similarity=0.417 Sum_probs=194.7
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
+|+|+||+.++...++++|+++++++++.+ .++.|||+++ ...++++|++|+|+|+|++|++++|+++..|+++|+++
T Consensus 126 ~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~ 203 (351)
T cd08233 126 GGGFAEYVVVPAYHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVS 203 (351)
T ss_pred CCceeeEEEechHHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 589999999999999999999999998876 5788999987 78889999999999999999999999999999778999
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCc
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 181 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 181 (258)
++++++.++++++|++.++++++ .++.+.+++.+++ ++|++||++|....+..++++++++ |+++.+|... ..
T Consensus 204 ~~~~~~~~~~~~~ga~~~i~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~ 277 (351)
T cd08233 204 EPSEARRELAEELGATIVLDPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KP 277 (351)
T ss_pred CCCHHHHHHHHHhCCCEEECCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CC
Confidence 99999999999999999999888 7888889888877 7999999999776689999999999 9999999764 34
Q ss_pred eeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccH-HHHHHHHhcCCe--eEEEEe
Q 025101 182 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI-NSAFDLLIKGKC--LRCVIW 255 (258)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~--~k~vi~ 255 (258)
.+++...++.+++++.++.... +++++++++++++|.+++.++++++|+++++ ++|++.+.+++. .|++|.
T Consensus 278 ~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 278 ISFNPNDLVLKEKTLTGSICYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred CccCHHHHHhhCcEEEEEeccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 4566667778899999886432 4789999999999998877888899999996 799999888774 498873
No 27
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.2e-32 Score=229.97 Aligned_cols=241 Identities=19% Similarity=0.251 Sum_probs=195.4
Q ss_pred CCCccccCCCCceeeeeccccceeeeEEEec-ceEEEcC-CCCCcc-chhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc
Q 025101 4 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-AHVVKVD-PTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL 80 (258)
Q Consensus 4 ~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~-~~~~~~p-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~ 80 (258)
.++..|. +||+|+++ |+|+||+++|+ ..++++| ++++++ +++++++++.|||+++.+..++++|++|||+|+
T Consensus 86 ~~v~~~~--vGd~V~~~---g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga 160 (338)
T cd08295 86 SGNPDFK--VGDLVWGF---TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAA 160 (338)
T ss_pred cCCCCCC--CCCEEEec---CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence 4455677 99999965 68999999999 7999995 678876 789999999999999878889999999999997
Q ss_pred -CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHH
Q 025101 81 -GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQE 158 (258)
Q Consensus 81 -g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~ 158 (258)
|++|++++|+|+.+|+ +|+++++++++.+++++ +|+++++++.+ .+++.+.+++.+++++|++||++|+.. +..
T Consensus 161 ~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvd~v~d~~g~~~-~~~ 236 (338)
T cd08295 161 SGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKE--EPDLDAALKRYFPNGIDIYFDNVGGKM-LDA 236 (338)
T ss_pred ccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCC--cccHHHHHHHhCCCCcEEEEECCCHHH-HHH
Confidence 9999999999999999 89999999999999998 99999998754 136777787776558999999999855 899
Q ss_pred HHHhhhcCCceEEEecccCCCCc----eeechHHHHhcCceEEecccCCCCC--CCcHHHHHHHHHcCCCCCCccccccc
Q 025101 159 AYACCRKGWGKTIVLGVDQPGSQ----LSLSSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKELELDKFVTHEM 232 (258)
Q Consensus 159 ~~~~l~~~~G~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~ 232 (258)
++++++++ |+++.+|....... ...+...+..+++++.++....... .+.+.++++++.+|.+++. +...|
T Consensus 237 ~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~ 313 (338)
T cd08295 237 VLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIAD 313 (338)
T ss_pred HHHHhccC-cEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eeccc
Confidence 99999999 99999986543211 1123345566788888765433211 2346788999999977654 44569
Q ss_pred ccccHHHHHHHHhcCCee-EEEEee
Q 025101 233 KFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 233 ~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
+++++.+|++.+++++.. |+|+++
T Consensus 314 ~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 314 GLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred CHHHHHHHHHHHhcCCCCceEEEEC
Confidence 999999999999988777 999864
No 28
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=2.8e-32 Score=230.95 Aligned_cols=247 Identities=22% Similarity=0.251 Sum_probs=189.5
Q ss_pred CCCCCccccCCCCceeeee----------c-------cccceeeeEEEecc--eEEEcCCCCCc----cchhhcchhhhh
Q 025101 2 PRDQTSRFKDLRGETIHHF----------V-------SVSSFSEYTVLDIA--HVVKVDPTVPP----NRACLLSCGVST 58 (258)
Q Consensus 2 ~~~~~~~~~~~~G~~v~~~----------~-------~~g~~~~~~~v~~~--~~~~~p~~~~~----~~aa~~~~~~~t 58 (258)
.+||.|.+| +.|...+.. . ..|+|+||+++|+. .++++|++++. .+++.+.+++.+
T Consensus 95 ~~Cg~C~~C-~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~t 173 (393)
T TIGR02819 95 IACGRCRNC-KEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPT 173 (393)
T ss_pred cCCCCChHH-HCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccccccccceeeeccHHHH
Confidence 357777777 666654311 0 14899999999964 69999998653 346677778999
Q ss_pred hhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHh
Q 025101 59 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM 138 (258)
Q Consensus 59 a~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~ 138 (258)
||+++ ...++++|++|||.|+|++|++++|+|+.+|++.+++++++++|.++++++|++. +++.+ ..++.+.+.+.
T Consensus 174 a~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~~~--~~~~~~~v~~~ 249 (393)
T TIGR02819 174 GYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCET-VDLSK--DATLPEQIEQI 249 (393)
T ss_pred HHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeE-EecCC--cccHHHHHHHH
Confidence 99986 4678899999999999999999999999999955666677888999999999974 44432 14677778888
Q ss_pred cCC-CCCEEEEecCCh--------------hhHHHHHHhhhcCCceEEEecccCCCCc-----------eeechHHHHhc
Q 025101 139 TDG-GADYCFECVGLA--------------SLVQEAYACCRKGWGKTIVLGVDQPGSQ-----------LSLSSFEVLHS 192 (258)
Q Consensus 139 ~~~-~~d~v~d~~g~~--------------~~~~~~~~~l~~~~G~~v~~g~~~~~~~-----------~~~~~~~~~~~ 192 (258)
+++ ++|++||++|.+ .+++.+++.++++ |+++.+|....... .++.....+.+
T Consensus 250 ~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 328 (393)
T TIGR02819 250 LGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAK 328 (393)
T ss_pred cCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeeecCCcccccccccccccccccchHHhhcc
Confidence 776 899999999986 3699999999999 99999998632111 12223344556
Q ss_pred CceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccc-cccccccHHHHHHHHhcCCeeEEEEeeC
Q 025101 193 GKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVT-HEMKFEEINSAFDLLIKGKCLRCVIWMG 257 (258)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~k~vi~~~ 257 (258)
++++.+.... ..+.+.++++++.+|++++.++++ ++|+++++++||+.+.+++..|++++++
T Consensus 329 ~~~i~g~~~~---~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 329 SHSFHTGQTP---VMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAAKKFVIDPH 391 (393)
T ss_pred CceEEeccCC---hhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCceEEEEeCC
Confidence 6777664211 123347899999999999888777 6899999999999999887779999874
No 29
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=9.5e-32 Score=226.60 Aligned_cols=227 Identities=41% Similarity=0.807 Sum_probs=195.6
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|++|+.+++..++++|+++++++++++++++.+||+++.....+.+|++|||+|+|++|++++++++.+|+..|+++
T Consensus 135 ~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~ 214 (365)
T cd05279 135 TSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAV 214 (365)
T ss_pred cccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 47899999999999999999999999999999999999988888899999999999989999999999999999557888
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCc--cHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhh-cCCceEEEecccCCC
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDK--SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR-KGWGKTIVLGVDQPG 179 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~--~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~-~~~G~~v~~g~~~~~ 179 (258)
++++++.++++++|++.+++.++ . ++.+.+.+++++++|++||++|....+..++++++ ++ |+++.+|.....
T Consensus 215 ~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~ 290 (365)
T cd05279 215 DINKDKFEKAKQLGATECINPRD---QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSG 290 (365)
T ss_pred eCCHHHHHHHHHhCCCeeccccc---ccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCC
Confidence 88999999999999999998876 4 67777888775589999999997666899999999 99 999999865433
Q ss_pred CceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEEE
Q 025101 180 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 254 (258)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi 254 (258)
....++...+ .++.++.|+..+.+...+.+.++++++.++.+++.++++++|+++++++||+.+++++..|+++
T Consensus 291 ~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~ 364 (365)
T cd05279 291 TEATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTIL 364 (365)
T ss_pred CceeeCHHHH-hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 3456666666 6678888876555555678999999999998887667889999999999999998877677776
No 30
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=9.8e-33 Score=227.37 Aligned_cols=237 Identities=22% Similarity=0.342 Sum_probs=188.8
Q ss_pred CCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhc------CCCCCCEEEEEcc-CHHHH
Q 025101 13 RGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA------NVEVGSTVVIFGL-GSIGL 85 (258)
Q Consensus 13 ~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~------~~~~g~~vlI~G~-g~~G~ 85 (258)
.|+.+..+...|+|+||+++|+..++++|+++++++++++|.++.|||.++.... +.++|++|||+|+ |++|+
T Consensus 93 ~g~~~~~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~ 172 (347)
T KOG1198|consen 93 HGDAVVAFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGT 172 (347)
T ss_pred eeeEEeeccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHH
Confidence 5666666667799999999999999999999999999999999999999999888 8999999999976 89999
Q ss_pred HHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhc
Q 025101 86 AVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK 165 (258)
Q Consensus 86 ~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~ 165 (258)
+++|+|+++|+ ..+++++++++.++++++|+++++|+++ +++.+.+++.++++||+||||+|+.. ......++..
T Consensus 173 ~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~---~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~ 247 (347)
T KOG1198|consen 173 AAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKD---ENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLK 247 (347)
T ss_pred HHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCC---HHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhcc
Confidence 99999999996 5666777999999999999999999999 99999999988449999999999986 7888888888
Q ss_pred CCceEEEecccCCCCceeechHHHH----h---cCceEEeccc---CCCCCCCcHHHHHHHHHcCCCCCCcccccccccc
Q 025101 166 GWGKTIVLGVDQPGSQLSLSSFEVL----H---SGKILMGSLF---GGLKAKSDIPILLKRYMDKELELDKFVTHEMKFE 235 (258)
Q Consensus 166 ~~G~~v~~g~~~~~~~~~~~~~~~~----~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 235 (258)
. |+...++.... .........++ . ....+.+... ......+.+..+.++++++ ++++.+.+.||++
T Consensus 248 ~-g~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~g--kikp~i~~~~p~~ 323 (347)
T KOG1198|consen 248 G-GGGAYIGLVGD-ELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKG--KIKPVIDSVYPFS 323 (347)
T ss_pred C-CceEEEEeccc-cccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcC--cccCCcceeeeHH
Confidence 7 76555654332 11111111001 0 0111111110 0111246788999999999 6667799999999
Q ss_pred cHHHHHHHHhcCCee-EEEEeeCC
Q 025101 236 EINSAFDLLIKGKCL-RCVIWMGE 258 (258)
Q Consensus 236 ~~~~a~~~~~~~~~~-k~vi~~~~ 258 (258)
++.+|++.+.++... |+++.+.+
T Consensus 324 ~~~ea~~~~~~~~~~GK~vl~~~~ 347 (347)
T KOG1198|consen 324 QAKEAFEKLEKSHATGKVVLEKDV 347 (347)
T ss_pred HHHHHHHHHhhcCCcceEEEEecC
Confidence 999999999997777 99998753
No 31
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=5.5e-32 Score=224.76 Aligned_cols=210 Identities=17% Similarity=0.181 Sum_probs=179.2
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|+||+.+|++.++++|+++++++++.+++++.|||+++ ...++++|++|||+|+|++|++++|+|+..|+ +|+++
T Consensus 118 ~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~ 195 (329)
T TIGR02822 118 DGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVM 195 (329)
T ss_pred CCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEE
Confidence 48999999999999999999999999999999999999987 46789999999999999999999999999999 89999
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCce
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 182 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 182 (258)
+++++|.++++++|+++++|..+ .. .+++|+++++.+...++..++++++++ |+++.+|...+. ..
T Consensus 196 ~~~~~~~~~a~~~Ga~~vi~~~~---~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~ 261 (329)
T TIGR02822 196 TRGAAARRLALALGAASAGGAYD---TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TP 261 (329)
T ss_pred eCChHHHHHHHHhCCceeccccc---cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CC
Confidence 99999999999999999987543 11 126899999888777799999999999 999999964332 22
Q ss_pred eechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEE
Q 025101 183 SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 254 (258)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi 254 (258)
.++...++.+++++.++.... +.++.++++++.+|+++ +++++|+++++++||+.+.+++.. |+|+
T Consensus 262 ~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 262 PLNYQRHLFYERQIRSVTSNT---RADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred CCCHHHHhhCCcEEEEeecCC---HHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 355556677889998876332 45688899999999775 357899999999999999998877 9887
No 32
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=2.9e-31 Score=223.64 Aligned_cols=228 Identities=32% Similarity=0.583 Sum_probs=193.2
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|++|+.+++..++++|+++++++++.+++++.||+.++.....+++|++|||+|+|++|++++|+++..|+.+++++
T Consensus 138 ~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~ 217 (365)
T cd08278 138 QSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAV 217 (365)
T ss_pred ccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 48999999999999999999999999999999999999988788889999999999889999999999999999668999
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCce
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 182 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 182 (258)
+++++|.+.++++|++.++++++ .++.+.+.+.+++++|+++||+|.+..+..++++++++ |+++.+|........
T Consensus 218 ~~~~~k~~~~~~~g~~~~i~~~~---~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~ 293 (365)
T cd08278 218 DIVDSRLELAKELGATHVINPKE---EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEV 293 (365)
T ss_pred eCCHHHHHHHHHcCCcEEecCCC---cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCcc
Confidence 99999999999999999999877 67888888877339999999999876689999999999 999999965322334
Q ss_pred eechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEEEe
Q 025101 183 SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 255 (258)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 255 (258)
.++...++.++.++.++........+.++++++++.++.+++.+.+ ..|+++++++|++.+++++..|++|+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 294 TLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred ccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence 4555555577899888764433224567889999999987654444 58999999999999998877798874
No 33
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=1.4e-31 Score=222.26 Aligned_cols=240 Identities=15% Similarity=0.174 Sum_probs=194.7
Q ss_pred CCCCcc-ccCCCCceeeeecc-ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEE--
Q 025101 3 RDQTSR-FKDLRGETIHHFVS-VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF-- 78 (258)
Q Consensus 3 ~~~~~~-~~~~~G~~v~~~~~-~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~-- 78 (258)
|.++.. |+ +||+|+++.+ .|+|+||+++|++.++++|+++++++++++++.+.|||.. ...... +++.++|+
T Consensus 76 G~~v~~~~~--vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~~~vlv~~~ 151 (324)
T cd08291 76 GGGPLAQSL--IGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGM-LETARE-EGAKAVVHTA 151 (324)
T ss_pred CCCccccCC--CCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHH-HHhhcc-CCCcEEEEcc
Confidence 344553 77 9999997654 3899999999999999999999999999888889999864 445554 55666665
Q ss_pred ccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHH
Q 025101 79 GLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQ 157 (258)
Q Consensus 79 G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~ 157 (258)
|+|++|++++|+|+.+|+ +|+++++++++.++++++|+++++++++ +++.+.+++.+++ ++|++||++|+.. ..
T Consensus 152 g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~v~~~~~~~~~d~vid~~g~~~-~~ 226 (324)
T cd08291 152 AASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD---PDFLEDLKELIAKLNATIFFDAVGGGL-TG 226 (324)
T ss_pred CccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC---ccHHHHHHHHhCCCCCcEEEECCCcHH-HH
Confidence 459999999999999999 8999999999999999999999999887 7898999988877 8999999999877 77
Q ss_pred HHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCC---CCcHHHHHHHHHcCCCCCCccccccccc
Q 025101 158 EAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKF 234 (258)
Q Consensus 158 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 234 (258)
..+++++++ |+++.+|.........++...++.+++++.++....+.. .+.+.++++++. + .+++.++++|++
T Consensus 227 ~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~i~~~~~l 302 (324)
T cd08291 227 QILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-T--ELKTTFASRYPL 302 (324)
T ss_pred HHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-C--ccccceeeEEcH
Confidence 889999999 999999965432222244556677899998887554321 345777888887 6 455678899999
Q ss_pred ccHHHHHHHHhcCCee-EEEEe
Q 025101 235 EEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 235 ~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
+++.+||+.+.+++.. |+++.
T Consensus 303 ~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 303 ALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHHHHHHHHHhCCCCCeEEeC
Confidence 9999999999887766 98873
No 34
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.6e-31 Score=224.52 Aligned_cols=218 Identities=22% Similarity=0.316 Sum_probs=182.6
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|+||+++|+..++++|+++++++++.+++++.|||+++......++|++++|+|+|++|++++|+||..|+ +|+++
T Consensus 132 ~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~ 210 (357)
T PLN02514 132 QGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVI 210 (357)
T ss_pred CCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEE
Confidence 48999999999999999999999999999999999999988666666899999999999999999999999999 78888
Q ss_pred cCCcchHHH-HHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCc
Q 025101 103 DVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 181 (258)
Q Consensus 103 ~~~~~~~~~-~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 181 (258)
++++++.+. ++++|++.++++.+ . +.+.+.+. ++|++|||+|...++..++++++++ |+++.+|.... .
T Consensus 211 ~~~~~~~~~~~~~~Ga~~~i~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~ 280 (357)
T PLN02514 211 SSSDKKREEALEHLGADDYLVSSD---A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINT--P 280 (357)
T ss_pred eCCHHHHHHHHHhcCCcEEecCCC---h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCC--C
Confidence 888777654 46799988877654 2 23444443 6999999999876689999999999 99999997643 3
Q ss_pred eeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEeeC
Q 025101 182 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWMG 257 (258)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~~ 257 (258)
.+++...++.+++++.|+..+. ..+++++++++.+|.+ .+++ ++|+++++++||+.+++++.. |+++.++
T Consensus 281 ~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~l--~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~ 351 (357)
T PLN02514 281 LQFVTPMLMLGRKVITGSFIGS---MKETEEMLEFCKEKGL--TSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVA 351 (357)
T ss_pred CcccHHHHhhCCcEEEEEecCC---HHHHHHHHHHHHhCCC--cCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence 4566667778899999987554 3578999999999965 4456 689999999999999998876 9999875
No 35
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=2.6e-31 Score=220.74 Aligned_cols=235 Identities=20% Similarity=0.243 Sum_probs=190.4
Q ss_pred cccCCCCceeeeeccccceeeeEEEecceEEEc----CCCCCccch-hhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-C
Q 025101 8 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV----DPTVPPNRA-CLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-G 81 (258)
Q Consensus 8 ~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~----p~~~~~~~a-a~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g 81 (258)
.|. +||+|+++ ++|++|++++.+.+.++ |++++++++ +++++++.|||+++.+..++++|++|||+|+ |
T Consensus 75 ~~~--~GdrV~~~---~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g 149 (325)
T TIGR02825 75 ALP--KGTIVLAS---PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAG 149 (325)
T ss_pred CCC--CCCEEEEe---cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCcc
Confidence 466 99999975 46999999999988887 899999987 6788899999999888899999999999985 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCc-cHHHHHHHhcCCCCCEEEEecCChhhHHHHH
Q 025101 82 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK-SVSQIIIDMTDGGADYCFECVGLASLVQEAY 160 (258)
Q Consensus 82 ~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~ 160 (258)
++|++++|+||..|+ +|+++++++++.++++++|++.++++++ . ++.+.++...++++|++||++|++. +..++
T Consensus 150 ~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~---~~~~~~~~~~~~~~gvdvv~d~~G~~~-~~~~~ 224 (325)
T TIGR02825 150 AVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT---VKSLEETLKKASPDGYDCYFDNVGGEF-SNTVI 224 (325)
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc---cccHHHHHHHhCCCCeEEEEECCCHHH-HHHHH
Confidence 999999999999999 8999999999999999999999999876 3 4555566655448999999999876 89999
Q ss_pred HhhhcCCceEEEecccCCCC---cee--echHHHHhcCceEEecccCCCCC---CCcHHHHHHHHHcCCCCCCccccccc
Q 025101 161 ACCRKGWGKTIVLGVDQPGS---QLS--LSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEM 232 (258)
Q Consensus 161 ~~l~~~~G~~v~~g~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~ 232 (258)
++++++ |+++.+|...... ..+ .....+..+++++.++....+.. .+.++++++++.+|++++. +...|
T Consensus 225 ~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~ 301 (325)
T TIGR02825 225 GQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYK--EYVIE 301 (325)
T ss_pred HHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccc--eeccc
Confidence 999999 9999998643211 111 12334556678887765432211 2457889999999987765 44678
Q ss_pred ccccHHHHHHHHhcCCee-EEEEe
Q 025101 233 KFEEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 233 ~~~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
+++++.+|++.+++++.. |+|++
T Consensus 302 ~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 302 GFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred cHHHHHHHHHHHhcCCCCCeEEeC
Confidence 999999999999988776 88863
No 36
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=9e-31 Score=221.08 Aligned_cols=231 Identities=42% Similarity=0.763 Sum_probs=191.4
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|+||++++++.++++|+++++++++++++++.+||+++....++++|++|+|+|+|++|++++++++..|+.+|+++
T Consensus 142 ~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~ 221 (373)
T cd08299 142 TSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAV 221 (373)
T ss_pred CCcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 58999999999999999999999999999999999999988788899999999999999999999999999998679999
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhh-hcCCceEEEecccCCCCc
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC-RKGWGKTIVLGVDQPGSQ 181 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~~~~~ 181 (258)
++++++.+.++++|++++++..+ ..+++.+.+.+++++++|+++||+|.+..+..++..+ +++ |+++.+|.......
T Consensus 222 ~~~~~~~~~a~~lGa~~~i~~~~-~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~ 299 (373)
T cd08299 222 DINKDKFAKAKELGATECINPQD-YKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQN 299 (373)
T ss_pred cCCHHHHHHHHHcCCceEecccc-cchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCce
Confidence 99999999999999999998765 0123666777766568999999999866677767765 568 99999997643333
Q ss_pred eeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEEEee
Q 025101 182 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 256 (258)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 256 (258)
.++.... +.++.++.++..+.+..+..+.++++.+.++.+++.+++++.|+++++++|++.+++++..|+++.+
T Consensus 300 ~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 300 LSINPML-LLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred eecCHHH-HhcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 4444432 3457888888766654456788888888888777777788999999999999999887766888864
No 37
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=2.6e-31 Score=206.69 Aligned_cols=242 Identities=19% Similarity=0.215 Sum_probs=203.9
Q ss_pred CCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCC--ccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-
Q 025101 4 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP--PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL- 80 (258)
Q Consensus 4 ~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~--~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~- 80 (258)
+.+..|+ +||.|.+.. +|+||.+++.+.+.|++++.- +.....+..+..|||.+|.+...+++|++|+|.|+
T Consensus 86 S~~~~f~--~GD~V~~~~---GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAa 160 (340)
T COG2130 86 SNHPGFQ--PGDIVVGVS---GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAA 160 (340)
T ss_pred cCCCCCC--CCCEEEecc---cceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecc
Confidence 4567798 999999764 699999999999999975422 22344467799999999999999999999999986
Q ss_pred CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHH
Q 025101 81 GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEA 159 (258)
Q Consensus 81 g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~ 159 (258)
|++|..+.|+||..|+ +|+.++.+++|.+++++ +|.+..|||++ +++.+.+++.++.++|+.||++|++- ++..
T Consensus 161 GaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~d~~~~L~~a~P~GIDvyfeNVGg~v-~DAv 235 (340)
T COG2130 161 GAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---EDFAQALKEACPKGIDVYFENVGGEV-LDAV 235 (340)
T ss_pred cccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc---ccHHHHHHHHCCCCeEEEEEcCCchH-HHHH
Confidence 9999999999999999 99999999999999988 99999999999 89999999999999999999999988 9999
Q ss_pred HHhhhcCCceEEEecccCCC--Cce---eechHHHHhcCceEEecccCCCC---CCCcHHHHHHHHHcCCCCCCcccccc
Q 025101 160 YACCRKGWGKTIVLGVDQPG--SQL---SLSSFEVLHSGKILMGSLFGGLK---AKSDIPILLKRYMDKELELDKFVTHE 231 (258)
Q Consensus 160 ~~~l~~~~G~~v~~g~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~ 231 (258)
+..|+.. +|++.||..+.- ... +-....++.+.+++.|+...... ..+..+++.+++.+|+++... +-+
T Consensus 236 ~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~ 312 (340)
T COG2130 236 LPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE--TIV 312 (340)
T ss_pred HHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe--eeh
Confidence 9999999 999999965531 111 12234467789999999863321 124567888999999888775 445
Q ss_pred cccccHHHHHHHHhcCCee-EEEEeeCC
Q 025101 232 MKFEEINSAFDLLIKGKCL-RCVIWMGE 258 (258)
Q Consensus 232 ~~~~~~~~a~~~~~~~~~~-k~vi~~~~ 258 (258)
-.++.+.+||..+-++++. |.|+++.+
T Consensus 313 dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 313 DGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hhhhccHHHHHHHhcCCccceEEEEecC
Confidence 6799999999999999998 99999864
No 38
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=5.2e-31 Score=221.44 Aligned_cols=219 Identities=24% Similarity=0.303 Sum_probs=171.1
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhh------hcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR------TANVEVGSTVVIFGLGSIGLAVAEGARLCGA 96 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~------~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~ 96 (258)
.|+|+||+++|++.++++|++++ +++ ++..++.++++++.. ..++++|++|+|+|+|++|++++|+||..|+
T Consensus 120 ~G~~aey~~~~~~~~~~~P~~~~-~~a-~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~ 197 (355)
T cd08230 120 HGFMREYFVDDPEYLVKVPPSLA-DVG-VLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF 197 (355)
T ss_pred CccceeEEEeccccEEECCCCCC-cce-eecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 48899999999999999999998 444 444466665554322 2235789999999999999999999999999
Q ss_pred CeEEEEcC---CcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEe
Q 025101 97 TRIIGVDV---ISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 97 ~~v~~~~~---~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 173 (258)
+|+++++ +++|.+.++++|++. +++.+ +++.+ .. ..+++|+||||+|.+..+..+++.++++ |+++.+
T Consensus 198 -~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~---~~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~ 268 (355)
T cd08230 198 -EVYVLNRRDPPDPKADIVEELGATY-VNSSK---TPVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILF 268 (355)
T ss_pred -eEEEEecCCCCHHHHHHHHHcCCEE-ecCCc---cchhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEE
Confidence 8999987 678999999999986 56665 44433 21 1238999999999877789999999999 999999
Q ss_pred cccCCCCceeec----hHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCC----CCCcccccccccccHHHHHHHHh
Q 025101 174 GVDQPGSQLSLS----SFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKEL----ELDKFVTHEMKFEEINSAFDLLI 245 (258)
Q Consensus 174 g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~a~~~~~ 245 (258)
|...+....+++ ...++.|++++.|+..+. +++++++++++.++.+ .++++++++|+++++.+||+.++
T Consensus 269 G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~ 345 (355)
T cd08230 269 GVPGGGREFEVDGGELNRDLVLGNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKP 345 (355)
T ss_pred ecCCCCCccccChhhhhhhHhhcCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcc
Confidence 976542334444 345677899999986433 4678999999988862 35677889999999999999887
Q ss_pred cCCeeEEEEee
Q 025101 246 KGKCLRCVIWM 256 (258)
Q Consensus 246 ~~~~~k~vi~~ 256 (258)
++. .|++|++
T Consensus 346 ~~~-~K~v~~~ 355 (355)
T cd08230 346 DGE-IKVVIEW 355 (355)
T ss_pred cCC-eEEEeeC
Confidence 553 5999875
No 39
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=99.98 E-value=1.1e-30 Score=217.22 Aligned_cols=237 Identities=20% Similarity=0.223 Sum_probs=192.2
Q ss_pred ccccCCCCceeeeeccccceeeeEEEecc---eEEEcCCCCC--c---cchhhcchhhhhhhhhhhhhcCCCCCCEEEEE
Q 025101 7 SRFKDLRGETIHHFVSVSSFSEYTVLDIA---HVVKVDPTVP--P---NRACLLSCGVSTGVGAAWRTANVEVGSTVVIF 78 (258)
Q Consensus 7 ~~~~~~~G~~v~~~~~~g~~~~~~~v~~~---~~~~~p~~~~--~---~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~ 78 (258)
..|. +||+|+++ ++|++|+++++. .++++|++++ + ..++++++++.|||+++.+..++++|++|||+
T Consensus 76 ~~~~--~Gd~V~~~---~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ 150 (329)
T cd08294 76 SKFP--VGTIVVAS---FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVN 150 (329)
T ss_pred CCCC--CCCEEEee---CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 3566 99999964 579999999999 9999999988 2 22346778999999998888899999999999
Q ss_pred cc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHH
Q 025101 79 GL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQ 157 (258)
Q Consensus 79 G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~ 157 (258)
|+ |++|++++|+|+..|+ +|+++++++++.++++++|+++++++++ +++.+.+++.+++++|++||++|+.. +.
T Consensus 151 ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~---~~~~~~v~~~~~~gvd~vld~~g~~~-~~ 225 (329)
T cd08294 151 GAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT---VSLEEALKEAAPDGIDCYFDNVGGEF-SS 225 (329)
T ss_pred cCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHCCCCcEEEEECCCHHH-HH
Confidence 85 9999999999999999 8999999999999999999999999987 78888888877668999999999855 89
Q ss_pred HHHHhhhcCCceEEEecccCCCC---c--eeechHHHHhcCceEEecccCCCC--CCCcHHHHHHHHHcCCCCCCccccc
Q 025101 158 EAYACCRKGWGKTIVLGVDQPGS---Q--LSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTH 230 (258)
Q Consensus 158 ~~~~~l~~~~G~~v~~g~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~ 230 (258)
.++++++++ |+++.+|...... . .......+..+++++.++....+. ..+.++++++++.+|.+++. ...
T Consensus 226 ~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~ 302 (329)
T cd08294 226 TVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHV 302 (329)
T ss_pred HHHHhhccC-CEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--ccc
Confidence 999999999 9999998532211 1 112233456678888886543321 12346678899999977755 335
Q ss_pred ccccccHHHHHHHHhcCCee-EEEEee
Q 025101 231 EMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 231 ~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
+|+++++.+|++.+++++.. |+++++
T Consensus 303 ~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 303 TEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred ccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 68999999999999988776 998864
No 40
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.98 E-value=5.9e-31 Score=216.75 Aligned_cols=225 Identities=16% Similarity=0.182 Sum_probs=176.4
Q ss_pred CCCCccccCCCCceeeeec---------cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCC
Q 025101 3 RDQTSRFKDLRGETIHHFV---------SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGS 73 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~---------~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~ 73 (258)
|.++ .|+ +||+|+... ..|+|+||+++|++.++++|++++++. ++++ ++.|||+++.. . ..+++
T Consensus 74 G~~v-~~~--vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~ 146 (308)
T TIGR01202 74 GPDT-GFR--PGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-EVKVL 146 (308)
T ss_pred cCCC-CCC--CCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCC
Confidence 3444 577 999998532 148999999999999999999998754 5554 57899998743 3 33688
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCCh
Q 025101 74 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 153 (258)
Q Consensus 74 ~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~ 153 (258)
+++|+|+|++|++++|+||.+|++.|++++.++++.+.++++ .++|+.+ . .+.++|+||||+|++
T Consensus 147 ~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~---~---------~~~g~Dvvid~~G~~ 211 (308)
T TIGR01202 147 PDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK---D---------PRRDYRAIYDASGDP 211 (308)
T ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh---c---------cCCCCCEEEECCCCH
Confidence 999999999999999999999995566777777776665543 4555433 1 123799999999998
Q ss_pred hhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccc
Q 025101 154 SLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK 233 (258)
Q Consensus 154 ~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 233 (258)
..++.+++.++++ |+++.+|.... ..+++...++.|++++.++.... .++++++++++.+|.+++.++++++|+
T Consensus 212 ~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~l~~~g~i~~~~~it~~~~ 285 (308)
T TIGR01202 212 SLIDTLVRRLAKG-GEIVLAGFYTE--PVNFDFVPAFMKEARLRIAAEWQ---PGDLHAVRELIESGALSLDGLITHQRP 285 (308)
T ss_pred HHHHHHHHhhhcC-cEEEEEeecCC--CcccccchhhhcceEEEEecccc---hhHHHHHHHHHHcCCCChhhccceeec
Confidence 7789999999999 99999997543 34455556677889988875332 467999999999999998889999999
Q ss_pred cccHHHHHHHHhcCCe-eEEEEe
Q 025101 234 FEEINSAFDLLIKGKC-LRCVIW 255 (258)
Q Consensus 234 ~~~~~~a~~~~~~~~~-~k~vi~ 255 (258)
++++++||+.+.++.. .|++++
T Consensus 286 l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 286 ASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred HHHHHHHHHHHhcCcCceEEEeC
Confidence 9999999998766544 499874
No 41
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.98 E-value=4.6e-30 Score=215.46 Aligned_cols=227 Identities=27% Similarity=0.409 Sum_probs=186.4
Q ss_pred ccceeeeEEEecc--eEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEE
Q 025101 23 VSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRII 100 (258)
Q Consensus 23 ~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~ 100 (258)
.|+|+||+++|.. .++++|+++++++++.++.++.|||+++ ....+++|++|||+|+|++|++++|+++..|+..|+
T Consensus 117 ~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~ 195 (351)
T cd08285 117 DGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRII 195 (351)
T ss_pred CcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEE
Confidence 5899999999974 8999999999999999988999999984 778899999999999899999999999999996688
Q ss_pred EEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCC
Q 025101 101 GVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 179 (258)
Q Consensus 101 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 179 (258)
++++++++.+.++++|++.++++++ .++.+.+.+.+++ ++|++||++|+...+..++++++++ |+++.+|.....
T Consensus 196 ~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~ 271 (351)
T cd08285 196 AVGSRPNRVELAKEYGATDIVDYKN---GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGED 271 (351)
T ss_pred EEeCCHHHHHHHHHcCCceEecCCC---CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCC
Confidence 9999999999999999999999887 7788888887766 8999999999877689999999999 999999866532
Q ss_pred Cceeech--HHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcc-cccccccccHHHHHHHHhcCCe--eEEEE
Q 025101 180 SQLSLSS--FEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKF-VTHEMKFEEINSAFDLLIKGKC--LRCVI 254 (258)
Q Consensus 180 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~--~k~vi 254 (258)
....++. .....+..++.+..... ..+.++++++++.+|.+++... ..+.++++++++|++.+++++. .|++|
T Consensus 272 ~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 349 (351)
T cd08285 272 DYLPIPREEWGVGMGHKTINGGLCPG--GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVI 349 (351)
T ss_pred ceeecChhhhhhhccccEEEEeecCC--ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEE
Confidence 2233332 11223455665543211 2467899999999998887443 4456899999999999988763 49998
Q ss_pred ee
Q 025101 255 WM 256 (258)
Q Consensus 255 ~~ 256 (258)
++
T Consensus 350 ~~ 351 (351)
T cd08285 350 IF 351 (351)
T ss_pred eC
Confidence 74
No 42
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=99.98 E-value=1.1e-30 Score=218.07 Aligned_cols=214 Identities=21% Similarity=0.266 Sum_probs=168.2
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhh--hcCCCCCCEEEEEccCHHHHHHHHHHHH-cCCCeE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRI 99 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~vlI~G~g~~G~~a~~l~~~-~g~~~v 99 (258)
.|+|+||+++|++.++++|+++++++|+++. +++++|+++.. ...+++|++|||+|+|++|++++|+++. .|..+|
T Consensus 114 ~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~v 192 (341)
T cd08237 114 DGFMQDYVFLPPDRLVKLPDNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKL 192 (341)
T ss_pred CCceEEEEEEchHHeEECCCCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcE
Confidence 3889999999999999999999999887665 88899998743 3456889999999999999999999986 665589
Q ss_pred EEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCC---hhhHHHHHHhhhcCCceEEEecc
Q 025101 100 IGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGL---ASLVQEAYACCRKGWGKTIVLGV 175 (258)
Q Consensus 100 ~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g~ 175 (258)
++++++++|++++++.+++..++ ++ ... ++|+|||++|. +.++..+++.++++ |+++.+|.
T Consensus 193 i~~~~~~~k~~~a~~~~~~~~~~-------~~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~ 257 (341)
T cd08237 193 VVFGKHQEKLDLFSFADETYLID-------DI-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGV 257 (341)
T ss_pred EEEeCcHhHHHHHhhcCceeehh-------hh-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEee
Confidence 99999999999998876643321 11 112 69999999994 45689999999999 99999996
Q ss_pred cCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcC---CCCCCccccccccccc---HHHHHHHHhcCCe
Q 025101 176 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK---ELELDKFVTHEMKFEE---INSAFDLLIKGKC 249 (258)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~---~~~a~~~~~~~~~ 249 (258)
... +.+++...++.+++++.|+..+. ..+++++++++.++ ..++.++++++|++++ +.+||+...++..
T Consensus 258 ~~~--~~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~ 332 (341)
T cd08237 258 SEY--PVPINTRMVLEKGLTLVGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSW 332 (341)
T ss_pred cCC--CcccCHHHHhhCceEEEEecccC---HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCc
Confidence 532 34566667788899999986432 45789999999998 3467788999999865 4555554444434
Q ss_pred eEEEEeeC
Q 025101 250 LRCVIWMG 257 (258)
Q Consensus 250 ~k~vi~~~ 257 (258)
.|+|+.++
T Consensus 333 gKvvi~~~ 340 (341)
T cd08237 333 GKTVMEWE 340 (341)
T ss_pred ceEEEEee
Confidence 49999874
No 43
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=99.98 E-value=3.2e-30 Score=214.08 Aligned_cols=241 Identities=15% Similarity=0.160 Sum_probs=201.5
Q ss_pred CCCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-C
Q 025101 3 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-G 81 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g 81 (258)
|.++..++ +||+|+++...|+|++|+.+++..++++|+++++++++.+++.+.+||+++ ...++.+|++|||+|+ |
T Consensus 74 G~~v~~~~--~Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g 150 (324)
T cd08292 74 GEGVKGLQ--VGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGG 150 (324)
T ss_pred CCCCCCCC--CCCEEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEccccc
Confidence 34555677 999999775579999999999999999999999999999998899999986 5688999999999986 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHH
Q 025101 82 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAY 160 (258)
Q Consensus 82 ~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~ 160 (258)
.+|++++|+|+.+|+ +++++++++++.+.++++|++.+++.++ .++.+.+.+.+++ ++|+|||++|+.. ...++
T Consensus 151 ~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~d~~g~~~-~~~~~ 225 (324)
T cd08292 151 AVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVSTEQ---PGWQDKVREAAGGAPISVALDSVGGKL-AGELL 225 (324)
T ss_pred HHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcCCC---chHHHHHHHHhCCCCCcEEEECCCChh-HHHHH
Confidence 999999999999999 8999998999999988899988998887 7888889998887 9999999999876 88999
Q ss_pred HhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCC-------CCCcHHHHHHHHHcCCCCCCcccccccc
Q 025101 161 ACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK-------AKSDIPILLKRYMDKELELDKFVTHEMK 233 (258)
Q Consensus 161 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 233 (258)
++++++ |+++.+|.... ...+++....+.++.++.++....+. ....+.++++++.+|.+++. +.+.|+
T Consensus 226 ~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~ 301 (324)
T cd08292 226 SLLGEG-GTLVSFGSMSG-EPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFD 301 (324)
T ss_pred HhhcCC-cEEEEEecCCC-CCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEec
Confidence 999999 99999986532 23445555566789999887644321 12357889999999977654 468899
Q ss_pred cccHHHHHHHHhcCCee-EEEEe
Q 025101 234 FEEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 234 ~~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
++++.+|++.+.++... |++++
T Consensus 302 ~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 302 LGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHHHHHHHHHcCCCCceEEeC
Confidence 99999999998877666 88763
No 44
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=99.97 E-value=4.2e-30 Score=219.54 Aligned_cols=246 Identities=18% Similarity=0.209 Sum_probs=192.9
Q ss_pred CCCCc-cccCCCCceeeeec----------------cccceeeeEEEecc----eEEEcCCCCCccchhhcch--hhhhh
Q 025101 3 RDQTS-RFKDLRGETIHHFV----------------SVSSFSEYTVLDIA----HVVKVDPTVPPNRACLLSC--GVSTG 59 (258)
Q Consensus 3 ~~~~~-~~~~~~G~~v~~~~----------------~~g~~~~~~~v~~~----~~~~~p~~~~~~~aa~~~~--~~~ta 59 (258)
|+++. +|+ +||+|+... ..|+|+||+++|++ .++++|+++++++++.+.. ...++
T Consensus 78 G~~v~~~~~--vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~ 155 (410)
T cd08238 78 GKKWQGKYK--PGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGA 155 (410)
T ss_pred CCCccCCCC--CCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHH
Confidence 44555 477 999997531 24899999999987 6899999999999886521 11223
Q ss_pred hhhh--------hhhcCCCCCCEEEEEc-cCHHHHHHHHHHHHcC--CCeEEEEcCCcchHHHHHhc--------CCc-e
Q 025101 60 VGAA--------WRTANVEVGSTVVIFG-LGSIGLAVAEGARLCG--ATRIIGVDVISEKFEIGKRF--------GVT-E 119 (258)
Q Consensus 60 ~~~l--------~~~~~~~~g~~vlI~G-~g~~G~~a~~l~~~~g--~~~v~~~~~~~~~~~~~~~~--------g~~-~ 119 (258)
+.++ .+..++++|++|+|+| +|++|++++|+|+.+| +.+|++++++++|.++++++ |++ .
T Consensus 156 ~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~ 235 (410)
T cd08238 156 YTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELL 235 (410)
T ss_pred hhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEE
Confidence 3332 2456789999999998 5999999999999875 45799999999999999997 766 5
Q ss_pred EEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccC-CCCceeechHHHHhcCceEE
Q 025101 120 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ-PGSQLSLSSFEVLHSGKILM 197 (258)
Q Consensus 120 vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~ 197 (258)
++++++ .+++.+.+++.+++ ++|++||++|.+.++..++++++++ |+++.++... .....+++...++.+++++.
T Consensus 236 ~i~~~~--~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~ 312 (410)
T cd08238 236 YVNPAT--IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCLNFFAGPVDKNFSAPLNFYNVHYNNTHYV 312 (410)
T ss_pred EECCCc--cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeEEEEEccCCCCccccccHHHhhhcCcEEE
Confidence 677653 14677888888877 8999999999877799999999998 8877664322 22224566667788899999
Q ss_pred ecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEeeC
Q 025101 198 GSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWMG 257 (258)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~~ 257 (258)
|+..+. +.+++++++++.+|++++.++++++|+++++.+|++.+. ++.. |+|+.++
T Consensus 313 g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~ 369 (410)
T cd08238 313 GTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ 369 (410)
T ss_pred EeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence 986433 467999999999999998889999999999999999998 4444 9999864
No 45
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=99.97 E-value=4.1e-30 Score=215.30 Aligned_cols=243 Identities=20% Similarity=0.276 Sum_probs=186.6
Q ss_pred CCCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccc----hhhcchhhhhhhhhhhhhcCCCCC--CEEE
Q 025101 3 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR----ACLLSCGVSTGVGAAWRTANVEVG--STVV 76 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~g--~~vl 76 (258)
|.++..|+ +||+|+++. ++|+||+++|++.++++|+++++++ +++++.++.|||+++.+..++++| ++||
T Consensus 84 G~~v~~~~--~Gd~V~~~~--~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~Vl 159 (345)
T cd08293 84 ESKHQKFA--VGDIVTSFN--WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMV 159 (345)
T ss_pred ccCCCCCC--CCCEEEecC--CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEE
Confidence 45667787 999998652 6899999999999999999865433 445677899999998777788876 9999
Q ss_pred EEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChh
Q 025101 77 IFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS 154 (258)
Q Consensus 77 I~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~ 154 (258)
|+|+ |++|++++|+|+.+|+.+|+++++++++.+++++ +|++.++++++ +++.+.+++.+++++|++||++|+..
T Consensus 160 I~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~---~~~~~~i~~~~~~gvd~vid~~g~~~ 236 (345)
T cd08293 160 VSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT---DNVAERLRELCPEGVDVYFDNVGGEI 236 (345)
T ss_pred EECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC---CCHHHHHHHHCCCCceEEEECCCcHH
Confidence 9987 9999999999999998569999999999999876 99999999887 78888888887668999999999876
Q ss_pred hHHHHHHhhhcCCceEEEecccCCC-Cce----eec--hHHH-HhcCceEEecccCCCC--CCCcHHHHHHHHHcCCCCC
Q 025101 155 LVQEAYACCRKGWGKTIVLGVDQPG-SQL----SLS--SFEV-LHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELEL 224 (258)
Q Consensus 155 ~~~~~~~~l~~~~G~~v~~g~~~~~-~~~----~~~--~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~ 224 (258)
+..++++++++ |+++.+|..... ... .+. ...+ ..+++++.+....... ..+.++++++++.+|.+++
T Consensus 237 -~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~ 314 (345)
T cd08293 237 -SDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKV 314 (345)
T ss_pred -HHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccc
Confidence 79999999999 999999853211 101 111 1111 2234443333211111 1234667888999997765
Q ss_pred CcccccccccccHHHHHHHHhcCCee-EEEEee
Q 025101 225 DKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 225 ~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
. ....++++++++|++.+.+++.. |+++++
T Consensus 315 ~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 315 K--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred e--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 4 33456999999999999988766 999864
No 46
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.97 E-value=1.4e-29 Score=213.43 Aligned_cols=229 Identities=46% Similarity=0.776 Sum_probs=193.7
Q ss_pred cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEE
Q 025101 22 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIG 101 (258)
Q Consensus 22 ~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~ 101 (258)
..|+|++|+.++++.++++|+++++++++.+++++.+||.++....++.+|++|||+|+|++|++++++++..|+.+|++
T Consensus 133 ~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~ 212 (363)
T cd08279 133 GLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIA 212 (363)
T ss_pred cCccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEE
Confidence 35899999999999999999999999999999999999998888889999999999988999999999999999945999
Q ss_pred EcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCC
Q 025101 102 VDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 180 (258)
Q Consensus 102 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 180 (258)
+++++++.+.++++|++++++.++ .++...+.++.++ ++|+++|++++...+..++++++++ |+++.+|......
T Consensus 213 ~~~~~~~~~~~~~~g~~~vv~~~~---~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~ 288 (363)
T cd08279 213 VDPVPEKLELARRFGATHTVNASE---DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGE 288 (363)
T ss_pred EcCCHHHHHHHHHhCCeEEeCCCC---ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCc
Confidence 999999999999999989998887 6788888888765 8999999999766689999999999 9999998654323
Q ss_pred ceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEEE
Q 025101 181 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 254 (258)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi 254 (258)
...++...+..++..+.++..+.....+.++++++++.++.+.+.+.++++|+++++++|++.+.+++..|.|+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 289 TVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred ccccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 44555556555677777765443333567889999999998876655778999999999999998887666554
No 47
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=99.97 E-value=1.6e-29 Score=211.29 Aligned_cols=219 Identities=24% Similarity=0.387 Sum_probs=186.1
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhh-cCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCeEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRII 100 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~l~~~~g-~~~v~ 100 (258)
.|+|++|+.++++.++++|+++++++++.++..+.|||+++... ..+.+|++|||+|+|++|++++++++..| . +|+
T Consensus 118 ~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~ 196 (340)
T cd05284 118 DGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVI 196 (340)
T ss_pred CCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEE
Confidence 58999999999999999999999999999999999999998665 46888999999999889999999999999 6 899
Q ss_pred EEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCC
Q 025101 101 GVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 179 (258)
Q Consensus 101 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 179 (258)
++++++++.+.++++|+++++++++ . +.+.+++.+++ ++|+++|++|+......++++++++ |+++.+|....
T Consensus 197 ~~~~~~~~~~~~~~~g~~~~~~~~~---~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~- 270 (340)
T cd05284 197 AVDRSEEALKLAERLGADHVLNASD---D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH- 270 (340)
T ss_pred EEeCCHHHHHHHHHhCCcEEEcCCc---c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-
Confidence 9999999999999999999998877 5 78888888776 8999999999866689999999999 99999986542
Q ss_pred CceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEee
Q 025101 180 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
..++....+.+++++.++.... .+.+.++++++.++.+++ ..+.|+++++++|++.+++++.. |+++.+
T Consensus 271 --~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 271 --GRLPTSDLVPTEISVIGSLWGT---RAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred --CccCHHHhhhcceEEEEEeccc---HHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 2333444456788888875332 467889999999997664 34689999999999999988776 888753
No 48
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=99.97 E-value=2.1e-29 Score=212.61 Aligned_cols=227 Identities=29% Similarity=0.472 Sum_probs=191.8
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|++|+.++...++++|+++++.+++.++.++.|||+++.....+.++++|||+|+|++|++++++|+..|+.+|+++
T Consensus 139 ~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~ 218 (367)
T cd08263 139 MGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAV 218 (367)
T ss_pred CCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEE
Confidence 48999999999999999999999999999999999999998777888999999999889999999999999999449989
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCc
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 181 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 181 (258)
++++++.++++++|++.+++.++ .++.+.+++..++ ++|++||++++......++++++++ |+++.+|.......
T Consensus 219 ~~s~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~ 294 (367)
T cd08263 219 DVRDEKLAKAKELGATHTVNAAK---EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGAT 294 (367)
T ss_pred eCCHHHHHHHHHhCCceEecCCc---ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCc
Confidence 88999999999999999999887 7788888888766 8999999999874489999999999 99999986543223
Q ss_pred eeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEe
Q 025101 182 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
..+....++.++.++.++.... .++.+.++++++.++.++..+.+++.|+++++.+|++.+++++.. |+|++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 295 AEIPITRLVRRGIKIIGSYGAR--PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred cccCHHHHhhCCeEEEecCCCC--cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 3444445556788887753221 135788899999999877665567899999999999999988766 88873
No 49
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=99.97 E-value=1.6e-29 Score=210.63 Aligned_cols=217 Identities=20% Similarity=0.338 Sum_probs=186.1
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+++||+.+++..++++|+++++++++.+++++.|||+++. ..++.+|++|||+|+|++|++++++++..|+ +|+++
T Consensus 116 ~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~ 193 (333)
T cd08296 116 DGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAI 193 (333)
T ss_pred CCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEE
Confidence 589999999999999999999999999999999999999874 4589999999999999999999999999999 89999
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCce
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 182 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 182 (258)
++++++.++++++|+++++++.+ .++...+++. +++|+++|++|....+...+++++++ |+++.+|... ...
T Consensus 194 ~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~ 265 (333)
T cd08296 194 SRGSDKADLARKLGAHHYIDTSK---EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPV 265 (333)
T ss_pred eCChHHHHHHHHcCCcEEecCCC---ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCC
Confidence 99999999999999999999887 6677777665 36999999998666699999999999 9999999654 234
Q ss_pred eechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEe
Q 025101 183 SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
+++...++.+++++.++..+. ..++.++++++.++.++ +.+ +.|+++++.+|++.+.+++.. |+|++
T Consensus 266 ~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~--~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 266 AVSPLQLIMGRKSIHGWPSGT---ALDSEDTLKFSALHGVR--PMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred CcCHHHHhhcccEEEEeCcCC---HHHHHHHHHHHHhCCCC--ceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 556666778899999986433 35688888998888654 345 689999999999999988876 98874
No 50
>PRK10083 putative oxidoreductase; Provisional
Probab=99.97 E-value=2.6e-29 Score=210.01 Aligned_cols=223 Identities=15% Similarity=0.305 Sum_probs=182.4
Q ss_pred cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHH-cCCCeEE
Q 025101 22 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRII 100 (258)
Q Consensus 22 ~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~-~g~~~v~ 100 (258)
..|+|+||+.++...++++|+++++++++ +..++.++++ +....++++|++|+|+|+|++|++++|+++. +|+..++
T Consensus 113 ~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~ 190 (339)
T PRK10083 113 RDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVI 190 (339)
T ss_pred cCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEE
Confidence 35899999999999999999999988876 4457888886 4577889999999999999999999999996 6996688
Q ss_pred EEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCC
Q 025101 101 GVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 179 (258)
Q Consensus 101 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 179 (258)
++++++++.+.++++|++.++++++ .++.+.+.. .+ ++|++||++|.+..+..++++++++ |+++.+|....
T Consensus 191 ~~~~~~~~~~~~~~~Ga~~~i~~~~---~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~- 263 (339)
T PRK10083 191 VADRIDERLALAKESGADWVINNAQ---EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE- 263 (339)
T ss_pred EEcCCHHHHHHHHHhCCcEEecCcc---ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC-
Confidence 8888999999999999999998876 566666643 23 6789999999776699999999999 99999996542
Q ss_pred CceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCC-e-eEEEEeeC
Q 025101 180 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK-C-LRCVIWMG 257 (258)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~-~k~vi~~~ 257 (258)
...++...+..+++++.+... ..+.++++++++.++.+++.++++++|+++++++|++.++++. . .|+++.+.
T Consensus 264 -~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~ 338 (339)
T PRK10083 264 -PSEIVQQGITGKELSIFSSRL----NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFA 338 (339)
T ss_pred -CceecHHHHhhcceEEEEEec----ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecC
Confidence 233344445567777776642 2467899999999998876656779999999999999998643 3 49999887
Q ss_pred C
Q 025101 258 E 258 (258)
Q Consensus 258 ~ 258 (258)
|
T Consensus 339 ~ 339 (339)
T PRK10083 339 E 339 (339)
T ss_pred C
Confidence 5
No 51
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.97 E-value=4.2e-29 Score=209.20 Aligned_cols=223 Identities=29% Similarity=0.427 Sum_probs=189.9
Q ss_pred cceeeeEEEecc--eEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEE
Q 025101 24 SSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIG 101 (258)
Q Consensus 24 g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~ 101 (258)
|+|++|+.++.. .++++|++++..+++.++..+.|||+++....++.+|+++||+|+|++|++++|+++..|..+|++
T Consensus 117 g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~ 196 (345)
T cd08286 117 GTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIM 196 (345)
T ss_pred CeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEE
Confidence 889999999987 899999999999999999999999997777788999999999999999999999999999438999
Q ss_pred EcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCC
Q 025101 102 VDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 180 (258)
Q Consensus 102 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 180 (258)
+++++++.++++++|++.++++++ .++...+.+.+++ ++|++|||+|....++.+++.++++ |+++.+|....
T Consensus 197 ~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~-- 270 (345)
T cd08286 197 VDLDDNRLEVAKKLGATHTVNSAK---GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGK-- 270 (345)
T ss_pred EcCCHHHHHHHHHhCCCceecccc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCC--
Confidence 988999999999999999999887 6777888887776 8999999999877689999999999 99999985432
Q ss_pred ceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcC---CeeEEEEee
Q 025101 181 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG---KCLRCVIWM 256 (258)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~---~~~k~vi~~ 256 (258)
..+++...++.+++++.+.... ...+.+++++++++.++..++++++|+++++++|++.+... ...|++|++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 271 PVDLHLEKLWIKNITITTGLVD----TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred CCCcCHHHHhhcCcEEEeecCc----hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 3445555567789998875321 24588899999999887766677999999999999999875 345999875
No 52
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.97 E-value=8.4e-29 Score=206.73 Aligned_cols=221 Identities=27% Similarity=0.475 Sum_probs=186.2
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|++|+.++++ ++++|+++++++++++ .++.++++++ ...++.+|++|||+|+|.+|++++|+|+.+|+ +|+++
T Consensus 114 ~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~ 189 (337)
T cd08261 114 DGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVV 189 (337)
T ss_pred CCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEE
Confidence 5899999999999 9999999999999887 4778888876 77889999999999889999999999999999 89999
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCc
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 181 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 181 (258)
++++++.++++++|+++++++++ .++.+.+.+.+++ ++|++||++|+...+..++++++++ |+++.+|.... .
T Consensus 190 ~~s~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~--~ 263 (337)
T cd08261 190 DIDDERLEFARELGADDTINVGD---EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKG--P 263 (337)
T ss_pred CCCHHHHHHHHHhCCCEEecCcc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCC--C
Confidence 99999999999999999999887 6788888888776 8999999998876689999999999 99999986542 2
Q ss_pred eeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCC-ee-EEEEee
Q 025101 182 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK-CL-RCVIWM 256 (258)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~-k~vi~~ 256 (258)
..++...+..+++++.+.. ....+.+.++++++.++.+++.+.+...++++++.+|++.+.+++ .. |+|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 264 VTFPDPEFHKKELTILGSR---NATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred CccCHHHHHhCCCEEEEec---cCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 3344444566778877753 223467889999999998776434668899999999999998873 55 999875
No 53
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.97 E-value=8.7e-29 Score=207.28 Aligned_cols=227 Identities=24% Similarity=0.343 Sum_probs=189.8
Q ss_pred cccceeeeEEEecc--eEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeE
Q 025101 22 SVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRI 99 (258)
Q Consensus 22 ~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v 99 (258)
+.|+|++|+.+++. .++++|++++.++++.++.++.|||+++.+..++.++++|+|+|+|++|++++++++..|+ +|
T Consensus 114 ~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~v 192 (345)
T cd08260 114 HPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RV 192 (345)
T ss_pred CCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eE
Confidence 36899999999985 8999999999999999999999999998778889999999999999999999999999999 89
Q ss_pred EEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCC
Q 025101 100 IGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 179 (258)
Q Consensus 100 ~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 179 (258)
+++++++++.+.++++|++.+++.++ ..++...+.+..++++|.+|||+|+...+...+++++++ |+++.+|.....
T Consensus 193 i~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~ 269 (345)
T cd08260 193 IAVDIDDDKLELARELGAVATVNASE--VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGE 269 (345)
T ss_pred EEEeCCHHHHHHHHHhCCCEEEcccc--chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCC
Confidence 99999999999999999988988764 135666777766558999999999766688999999999 999999865433
Q ss_pred Cc-eeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEe
Q 025101 180 SQ-LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 180 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
.. ..++...+..+++++.+.... ..+.+++++++++++.+...+.+++.++++++++|++.++.+... |+|+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 270 EAGVALPMDRVVARELEIVGSHGM---PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred CCccccCHHHHhhcccEEEeCCcC---CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 22 344555555778888887532 246788999999999877655567899999999999999987766 87753
No 54
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.97 E-value=5.7e-29 Score=206.45 Aligned_cols=242 Identities=17% Similarity=0.185 Sum_probs=202.4
Q ss_pred CCCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-C
Q 025101 3 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-G 81 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g 81 (258)
|+++..++ +||+|+++...|+|++|+.++...++++|+++++++++.+++.+.+||+++.....+.+|++|+|+|+ |
T Consensus 72 G~~v~~~~--~Gd~V~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~ 149 (323)
T cd05282 72 GSGVSGLL--VGQRVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANS 149 (323)
T ss_pred CCCCCCCC--CCCEEEEeCCCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEccccc
Confidence 45666777 99999976546899999999999999999999999999999999999999877788899999999987 8
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHH
Q 025101 82 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAY 160 (258)
Q Consensus 82 ~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~ 160 (258)
++|++++++|+..|+ +++++++++++.+.++++|++.++++++ .++...+.+.+++ ++|++|||+|+.. ....+
T Consensus 150 ~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~ 224 (323)
T cd05282 150 AVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRVKEATGGAGARLALDAVGGES-ATRLA 224 (323)
T ss_pred HHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHHHHHhcCCCceEEEECCCCHH-HHHHH
Confidence 999999999999999 8999999999999999999999998876 6788888888877 9999999999877 77889
Q ss_pred HhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCC-------CCcHHHHHHHHHcCCCCCCcccccccc
Q 025101 161 ACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-------KSDIPILLKRYMDKELELDKFVTHEMK 233 (258)
Q Consensus 161 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~ 233 (258)
++++++ |+++.+|..... ...++...+..++.++.+.....+.. .+.+.++++++.++.+.. .+++.|+
T Consensus 225 ~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~ 300 (323)
T cd05282 225 RSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTT--PVGAKFP 300 (323)
T ss_pred HhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCccc--Cccceec
Confidence 999999 999999866443 34455555555789988876544321 134777888998997654 3568899
Q ss_pred cccHHHHHHHHhcCCee-EEEEe
Q 025101 234 FEEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 234 ~~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
++++++|++.+.+++.. |++++
T Consensus 301 ~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 301 LEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHHHHHHhcCCCCceEeeC
Confidence 99999999999887666 88763
No 55
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.97 E-value=9.8e-29 Score=209.68 Aligned_cols=225 Identities=27% Similarity=0.414 Sum_probs=188.3
Q ss_pred ccceeeeEEEecc--eEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEE
Q 025101 23 VSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRII 100 (258)
Q Consensus 23 ~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~ 100 (258)
.|+|+||++++++ .++++|++++++++++++..+.|||+++ ...++.+|++|||+|+|++|++++++|+..|+.+|+
T Consensus 135 ~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi 213 (386)
T cd08283 135 AGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVI 213 (386)
T ss_pred CCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEE
Confidence 4899999999988 8999999999999999999999999997 788899999999999899999999999999985699
Q ss_pred EEcCCcchHHHHHhcCCceEEcCCCCCCc-cHHHHHHHhcCC-CCCEEEEecCCh---------------------hhHH
Q 025101 101 GVDVISEKFEIGKRFGVTEFVNSKNCGDK-SVSQIIIDMTDG-GADYCFECVGLA---------------------SLVQ 157 (258)
Q Consensus 101 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~~-~~~~~i~~~~~~-~~d~v~d~~g~~---------------------~~~~ 157 (258)
++++++++.+++++++...++++.+ . ++.+.+.+.+++ ++|++||++|+. ..+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~vi~~~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (386)
T cd08283 214 AIDRVPERLEMARSHLGAETINFEE---VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALR 290 (386)
T ss_pred EEcCCHHHHHHHHHcCCcEEEcCCc---chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHH
Confidence 9999999999999984446777766 5 488888888877 899999999753 3578
Q ss_pred HHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccH
Q 025101 158 EAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 237 (258)
Q Consensus 158 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 237 (258)
.++++++++ |+++.+|..... ...++....+.+++++.+.... ..+.+.++++++.++.+...+++++.|+++++
T Consensus 291 ~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~ 365 (386)
T cd08283 291 EAIQAVRKG-GTVSIIGVYGGT-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDA 365 (386)
T ss_pred HHHHHhccC-CEEEEEcCCCCC-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHH
Confidence 899999999 999999865432 2334444567788888887422 24678899999999988776667789999999
Q ss_pred HHHHHHHhcCC-ee-EEEEee
Q 025101 238 NSAFDLLIKGK-CL-RCVIWM 256 (258)
Q Consensus 238 ~~a~~~~~~~~-~~-k~vi~~ 256 (258)
.+|++.+.+++ .. |++|++
T Consensus 366 ~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 366 PEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred HHHHHHHHhCCCCeEEEEecC
Confidence 99999998876 33 999863
No 56
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.97 E-value=1.3e-28 Score=206.09 Aligned_cols=241 Identities=25% Similarity=0.389 Sum_probs=197.8
Q ss_pred CCCCccccCCCCceeeeec---------------------------cccceeeeEEEecce-----EEEcCCCCCccchh
Q 025101 3 RDQTSRFKDLRGETIHHFV---------------------------SVSSFSEYTVLDIAH-----VVKVDPTVPPNRAC 50 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~---------------------------~~g~~~~~~~v~~~~-----~~~~p~~~~~~~aa 50 (258)
|.++..++ +||+|+++. ..|+|++|+.++++. ++++|+++++++++
T Consensus 69 G~~v~~~~--~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa 146 (343)
T cd08235 69 GDGVTGFK--VGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAA 146 (343)
T ss_pred CCCCCCCC--CCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHH
Confidence 34455677 899999652 358999999999998 99999999999998
Q ss_pred hcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCcc
Q 025101 51 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKS 130 (258)
Q Consensus 51 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 130 (258)
++ .++.+||+++. ..++.+|++|+|+|+|++|++++|+|+..|++.|+++++++++.+.++++|++.++++++ .+
T Consensus 147 ~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~---~~ 221 (343)
T cd08235 147 LV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE---ED 221 (343)
T ss_pred hh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCc---cC
Confidence 76 68899999874 458999999999988999999999999999933888999999999999999989999887 78
Q ss_pred HHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCc
Q 025101 131 VSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSD 209 (258)
Q Consensus 131 ~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (258)
+.+.+.+..++ ++|++|||+++...+...+++++++ |+++.+|.........+....+..+++++.+..... .+.
T Consensus 222 ~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~ 297 (343)
T cd08235 222 LVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAAS---PED 297 (343)
T ss_pred HHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCC---hhh
Confidence 88888888777 8999999999776689999999999 999999864433233444455566778877664322 456
Q ss_pred HHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEe
Q 025101 210 IPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 210 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
++++++++.++.+.+.+.+..+|+++++.+|++.+.+++ . |+|+.
T Consensus 298 ~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 298 YKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred HHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 888999999997765445668899999999999999888 6 88863
No 57
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.97 E-value=1.3e-28 Score=204.31 Aligned_cols=242 Identities=17% Similarity=0.176 Sum_probs=200.5
Q ss_pred CCCCccccCCCCceeeeecc--ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc
Q 025101 3 RDQTSRFKDLRGETIHHFVS--VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL 80 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~--~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~ 80 (258)
|+++..++ +||+|+++.+ .|+|++|+.++...++++|+++++++++.+++++.|||. +.+..+++++++++|+|+
T Consensus 75 G~~v~~~~--~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~-~~~~~~~~~~~~vlI~g~ 151 (324)
T cd08244 75 GPGVDPAW--LGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALG-LLDLATLTPGDVVLVTAA 151 (324)
T ss_pred CCCCCCCC--CCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHH-HHHhcCCCCCCEEEEEcC
Confidence 34445677 9999997642 689999999999999999999999999999999999954 567888999999999985
Q ss_pred -CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHH
Q 025101 81 -GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQE 158 (258)
Q Consensus 81 -g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~ 158 (258)
|++|++++++++..|+ +|+++++++++.+.++++|++.+++.++ .++.+.+.+..++ ++|+++|++|+.. ...
T Consensus 152 ~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~ 226 (324)
T cd08244 152 AGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYTR---PDWPDQVREALGGGGVTVVLDGVGGAI-GRA 226 (324)
T ss_pred CchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecCC---ccHHHHHHHHcCCCCceEEEECCChHh-HHH
Confidence 9999999999999999 8999999999999999999988888877 7788888888776 8999999999886 799
Q ss_pred HHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCC---CCcHHHHHHHHHcCCCCCCcccccccccc
Q 025101 159 AYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFE 235 (258)
Q Consensus 159 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 235 (258)
++++++++ |+++.+|...... ..++....+.+++++.+........ .+.+.+.++++.++.+. +.+++.|+++
T Consensus 227 ~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~ 302 (324)
T cd08244 227 ALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLV--PVVGQTFPLE 302 (324)
T ss_pred HHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCcc--CccceEEeHH
Confidence 99999999 9999998654322 2445455577888888776433211 24567788889888665 3466889999
Q ss_pred cHHHHHHHHhcCCee-EEEEee
Q 025101 236 EINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 236 ~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
++++|++.+.+++.. |+++++
T Consensus 303 ~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 303 RAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred HHHHHHHHHHcCCCCceEEEeC
Confidence 999999999888777 988864
No 58
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=99.97 E-value=7.8e-29 Score=210.96 Aligned_cols=223 Identities=18% Similarity=0.286 Sum_probs=183.8
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhh--cCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCeE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRI 99 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v 99 (258)
.|+|+||+++++..++++|+++++++++.+++++.|||+++... +++.+|++|+|+|+ |++|++++++++..|+ ++
T Consensus 143 ~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~v 221 (393)
T cd08246 143 YGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NP 221 (393)
T ss_pred CCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eE
Confidence 48999999999999999999999999999999999999987644 67899999999997 9999999999999999 78
Q ss_pred EEEcCCcchHHHHHhcCCceEEcCCCCC-------------------CccHHHHHHHhcCC--CCCEEEEecCChhhHHH
Q 025101 100 IGVDVISEKFEIGKRFGVTEFVNSKNCG-------------------DKSVSQIIIDMTDG--GADYCFECVGLASLVQE 158 (258)
Q Consensus 100 ~~~~~~~~~~~~~~~~g~~~vi~~~~~~-------------------~~~~~~~i~~~~~~--~~d~v~d~~g~~~~~~~ 158 (258)
+++++++++.++++++|++.++++++.+ ...+.+.+.+++++ ++|++||++|+.. +..
T Consensus 222 v~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~-~~~ 300 (393)
T cd08246 222 VAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT-FPT 300 (393)
T ss_pred EEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-HHH
Confidence 8889999999999999999999875410 01356677787766 6999999999855 899
Q ss_pred HHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHH
Q 025101 159 AYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEIN 238 (258)
Q Consensus 159 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 238 (258)
++++++++ |+++.+|..... ..+++...++.++.++.+++... .+.+.++++++.++.+. +.++++|++++++
T Consensus 301 ~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~ 373 (393)
T cd08246 301 SVFVCDRG-GMVVICAGTTGY-NHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRID--PCLSKVFSLDETP 373 (393)
T ss_pred HHHHhccC-CEEEEEcccCCC-CCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCce--eeeeEEEeHHHHH
Confidence 99999999 999999865432 23344455666788888875443 35688899999999665 3467899999999
Q ss_pred HHHHHHhcC-Cee-EEEE
Q 025101 239 SAFDLLIKG-KCL-RCVI 254 (258)
Q Consensus 239 ~a~~~~~~~-~~~-k~vi 254 (258)
+|++.+.++ +.. |+++
T Consensus 374 ~a~~~~~~~~~~~gkvvv 391 (393)
T cd08246 374 DAHQLMHRNQHHVGNMAV 391 (393)
T ss_pred HHHHHHHhCccccceEEE
Confidence 999999887 555 7775
No 59
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.97 E-value=1.6e-28 Score=204.60 Aligned_cols=244 Identities=20% Similarity=0.283 Sum_probs=199.0
Q ss_pred CCCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-C
Q 025101 3 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-G 81 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g 81 (258)
|.++..++ +||+|+++..+|+|++|++++.+.++++|+++++++++.++.++.+||+++.....+++|++|+|+|+ |
T Consensus 74 G~~v~~~~--~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g 151 (334)
T PTZ00354 74 GSDVKRFK--EGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGAS 151 (334)
T ss_pred CCCCCCCC--CCCEEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence 34555677 99999987667999999999999999999999999999999999999999877788999999999986 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCcc-HHHHHHHhcCC-CCCEEEEecCChhhHHHH
Q 025101 82 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKS-VSQIIIDMTDG-GADYCFECVGLASLVQEA 159 (258)
Q Consensus 82 ~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~-~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~ 159 (258)
++|++++++++..|+ +++++++++++.++++++|++.+++... .+ +.+.+.+.+++ ++|++||++|+.. +..+
T Consensus 152 ~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~ 226 (334)
T PTZ00354 152 GVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIRYPD---EEGFAPKVKKLTGEKGVNLVLDCVGGSY-LSET 226 (334)
T ss_pred hHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCC---hhHHHHHHHHHhCCCCceEEEECCchHH-HHHH
Confidence 999999999999999 7788888999999999999988888765 44 77788888766 8999999998765 8999
Q ss_pred HHhhhcCCceEEEecccCCCCcee-echHHHHhcCceEEecccCCCCC--C-----CcHHHHHHHHHcCCCCCCcccccc
Q 025101 160 YACCRKGWGKTIVLGVDQPGSQLS-LSSFEVLHSGKILMGSLFGGLKA--K-----SDIPILLKRYMDKELELDKFVTHE 231 (258)
Q Consensus 160 ~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~g~~~~~~~~~~~ 231 (258)
+++++++ |+++.+|...+. ... ++...++.+..++.++....... + +.++++++++.++.+.. .+.+.
T Consensus 227 ~~~l~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~ 302 (334)
T PTZ00354 227 AEVLAVD-GKWIVYGFMGGA-KVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRT 302 (334)
T ss_pred HHHhccC-CeEEEEecCCCC-cccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccE
Confidence 9999999 999999854332 222 55555666677888865433111 0 22467778888886653 36688
Q ss_pred cccccHHHHHHHHhcCCee-EEEEeeC
Q 025101 232 MKFEEINSAFDLLIKGKCL-RCVIWMG 257 (258)
Q Consensus 232 ~~~~~~~~a~~~~~~~~~~-k~vi~~~ 257 (258)
+++++++++++.+.+++.. |+++.+.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 303 YPLEEVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred EcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 9999999999999887665 9998765
No 60
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.97 E-value=1.4e-28 Score=206.10 Aligned_cols=225 Identities=29% Similarity=0.444 Sum_probs=185.5
Q ss_pred ccceeeeEEEecc--eEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEE
Q 025101 23 VSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRII 100 (258)
Q Consensus 23 ~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~ 100 (258)
.|+|++|++++++ .++++|+++++++++.++.++.|||+++ ...++++|++|||.|+|++|++++|+|+.+|..+++
T Consensus 118 ~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~ 196 (347)
T cd05278 118 DGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARII 196 (347)
T ss_pred CCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEE
Confidence 5899999999997 8999999999999999999999999987 678899999999988899999999999999965788
Q ss_pred EEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCC
Q 025101 101 GVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 179 (258)
Q Consensus 101 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 179 (258)
++++++++.+.++++|++.++++++ .++.+.+++.+++ ++|++||++|....+..++++++++ |+++.+|.....
T Consensus 197 ~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~ 272 (347)
T cd05278 197 AVDSNPERLDLAKEAGATDIINPKN---GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKP 272 (347)
T ss_pred EEeCCHHHHHHHHHhCCcEEEcCCc---chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCC
Confidence 8888888999999999999999887 6788888888776 8999999999855589999999999 999999854332
Q ss_pred CceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCe-e-EEEEee
Q 025101 180 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-L-RCVIWM 256 (258)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~-k~vi~~ 256 (258)
... ......+.+++++.+..... .+.+.++++++.++.+++.+.+...++++++++|++.+..++. . |+++++
T Consensus 273 ~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 273 DPL-PLLGEWFGKNLTFKTGLVPV---RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred ccc-CccchhhhceeEEEeeccCc---hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 111 11122345677777654222 4678899999999987765545688999999999999987766 4 888763
No 61
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=1.9e-28 Score=204.87 Aligned_cols=239 Identities=22% Similarity=0.330 Sum_probs=190.0
Q ss_pred CCCcc-ccCCCCceeeeec-----------------cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhh
Q 025101 4 DQTSR-FKDLRGETIHHFV-----------------SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR 65 (258)
Q Consensus 4 ~~~~~-~~~~~G~~v~~~~-----------------~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~ 65 (258)
.++.. |+ +||+|+++. ..|+|+||+.++++.++++|+++++++++ ++.++++||++ ..
T Consensus 80 ~~v~~~~~--~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~ 155 (341)
T cd08262 80 PGTERKLK--VGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHA-VR 155 (341)
T ss_pred CCCcCCCC--CCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHH-HH
Confidence 34444 76 999999762 35899999999999999999999999887 55688999998 47
Q ss_pred hcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHH---HHHHhcCC-
Q 025101 66 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQ---IIIDMTDG- 141 (258)
Q Consensus 66 ~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~---~i~~~~~~- 141 (258)
..++++|++|||+|+|++|++++|+++..|+..++++++++++.++++++|+++++++++ .+..+ .+....++
T Consensus 156 ~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~~~~ 232 (341)
T cd08262 156 RARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAA---DSPFAAWAAELARAGGP 232 (341)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCC---cCHHHHHHHHHHHhCCC
Confidence 888999999999988999999999999999955788888899999999999988998776 32221 34445555
Q ss_pred CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCC
Q 025101 142 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKE 221 (258)
Q Consensus 142 ~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 221 (258)
++|++||++|+...+..++++++++ |+++.+|....... ........++.++.+.... ..+.+.++++++.+|.
T Consensus 233 ~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~g~ 306 (341)
T cd08262 233 KPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDN--IEPALAIRKELTLQFSLGY---TPEEFADALDALAEGK 306 (341)
T ss_pred CCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCc--cCHHHHhhcceEEEEEecc---cHHHHHHHHHHHHcCC
Confidence 8999999999865588999999999 99999986533222 2222334567777655322 2347889999999998
Q ss_pred CCCCcccccccccccHHHHHHHHhcCCee-EEEEe
Q 025101 222 LELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
+.+.+.++++|+++++++|++.+.+++.. |++++
T Consensus 307 i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 307 VDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred CChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 88666667899999999999999988766 88864
No 62
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.97 E-value=1.8e-28 Score=205.69 Aligned_cols=241 Identities=23% Similarity=0.304 Sum_probs=197.9
Q ss_pred CCCCccccCCCCceeeeec---------------------------cccceeeeEEEecceEEEcCCCCCccchhhcchh
Q 025101 3 RDQTSRFKDLRGETIHHFV---------------------------SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 55 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~---------------------------~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~ 55 (258)
|.++..++ +||+|+.+. ..|+|++|+.++.+.++++|+++++.+++.+++.
T Consensus 82 G~~v~~~~--~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~ 159 (350)
T cd08240 82 GPDAADVK--VGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACS 159 (350)
T ss_pred CCCCCCCC--CCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhch
Confidence 44555566 899998652 3589999999999999999999999999999999
Q ss_pred hhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHH
Q 025101 56 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQII 135 (258)
Q Consensus 56 ~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i 135 (258)
+.|||+++.......++++|+|+|+|++|++++|+|+..|+++|+++++++++.+.++++|++.+++.++ .++.+.+
T Consensus 160 ~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~ 236 (350)
T cd08240 160 GLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSD---PDAAKRI 236 (350)
T ss_pred hhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCC---ccHHHHH
Confidence 9999999876666678999999988999999999999999977889999999999999999988888877 6777777
Q ss_pred HHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHH
Q 025101 136 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLK 215 (258)
Q Consensus 136 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (258)
.+..++++|++||++|....+..++++++++ |+++.+|....... .+......++.++.+..... .+++.++++
T Consensus 237 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~--~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~ 310 (350)
T cd08240 237 IKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEAT--LPLPLLPLRALTIQGSYVGS---LEELRELVA 310 (350)
T ss_pred HHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCc--ccHHHHhhcCcEEEEcccCC---HHHHHHHHH
Confidence 7776558999999999766699999999999 99999986544222 22233344788888775433 356888999
Q ss_pred HHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEee
Q 025101 216 RYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 216 ~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
+++++.++.. ....|+++++++|++.+.+++.. |+++++
T Consensus 311 ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 311 LAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred HHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 9999976643 45789999999999999887766 888753
No 63
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.97 E-value=3e-28 Score=203.94 Aligned_cols=223 Identities=27% Similarity=0.393 Sum_probs=185.4
Q ss_pred ccceeeeEEEecc--eEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEE
Q 025101 23 VSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRII 100 (258)
Q Consensus 23 ~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~ 100 (258)
.|+|++|+.+++. .++++|+++++++++.++.++.|||+++. ...+.+|++|||+|+|++|++++++++.+|+.+|+
T Consensus 118 ~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~ 196 (344)
T cd08284 118 DGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVF 196 (344)
T ss_pred CCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEE
Confidence 4899999999975 99999999999999999999999999874 57888999999999899999999999999975789
Q ss_pred EEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCC
Q 025101 101 GVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 179 (258)
Q Consensus 101 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 179 (258)
++++++++.+.++++|+. +++.+. .++...+.+++++ ++|++||++|+...+...+++++++ |+++.+|....
T Consensus 197 ~~~~~~~~~~~~~~~g~~-~~~~~~---~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~- 270 (344)
T cd08284 197 AVDPVPERLERAAALGAE-PINFED---AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTA- 270 (344)
T ss_pred EEcCCHHHHHHHHHhCCe-EEecCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCC-
Confidence 998888999999999975 566666 6788888888876 8999999999876689999999999 99999996643
Q ss_pred CceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEEEe
Q 025101 180 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 255 (258)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 255 (258)
..........+.+++++.+.. ....+.+.++++++.++.+++.++++++++++++++|++.+.+++..|+|++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 271 EEFPFPGLDAYNKNLTLRFGR---CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred CCccccHHHHhhcCcEEEEec---CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 223344445567788877543 1235679999999999987765556789999999999998887655688875
No 64
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=3.2e-28 Score=203.72 Aligned_cols=220 Identities=27% Similarity=0.451 Sum_probs=183.4
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|++|++++++.++++|+++++++++.+ .++.+|++++ ...++++|++++|+|+|++|++++|+|+..|+.+|+++
T Consensus 116 ~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~ 193 (343)
T cd05285 116 DGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVT 193 (343)
T ss_pred CCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEE
Confidence 589999999999999999999999999877 4788999986 78899999999999889999999999999999448999
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccH---HHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCC
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSV---SQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 178 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~---~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 178 (258)
++++++.++++++|++.++++++ .++ .+.+.+.+++ ++|++|||+|+...++.++++++++ |+++.+|....
T Consensus 194 ~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~ 269 (343)
T cd05285 194 DIDPSRLEFAKELGATHTVNVRT---EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKP 269 (343)
T ss_pred CCCHHHHHHHHHcCCcEEecccc---ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC
Confidence 99999999999999999998877 453 7778877776 8999999999875589999999999 99999985433
Q ss_pred CCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCC-e-eEEEE
Q 025101 179 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK-C-LRCVI 254 (258)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~-~k~vi 254 (258)
. ..++......+++++.+.... .+.+.+.++++.++.+.+.+.+.+.|+++++.+|++.+.+++ . .|++|
T Consensus 270 ~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 270 E--VTLPLSAASLREIDIRGVFRY----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred C--CccCHHHHhhCCcEEEEeccC----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 2 333444556667777776422 256888999999997765555678899999999999998874 3 59987
No 65
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.97 E-value=4e-28 Score=203.64 Aligned_cols=221 Identities=26% Similarity=0.414 Sum_probs=183.9
Q ss_pred cccceeeeEEEecc-eEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEE
Q 025101 22 SVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRII 100 (258)
Q Consensus 22 ~~g~~~~~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~ 100 (258)
..|+|+||+.++++ .++++|+++++++++.+ .++.++|+++ +..++.+|++|+|.|+|++|++++++|+..|+..++
T Consensus 126 ~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~ 203 (350)
T cd08256 126 VNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLI 203 (350)
T ss_pred CCCcceeeEEcccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEE
Confidence 35899999999988 57899999999999988 7899999987 788899999999977899999999999999986678
Q ss_pred EEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCC
Q 025101 101 GVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 179 (258)
Q Consensus 101 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 179 (258)
++++++++.+.++++|++.+++.++ .++.+.+.+.+++ ++|++||++|....+..++++++++ |+++.+|.....
T Consensus 204 ~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~ 279 (350)
T cd08256 204 VLDLKDERLALARKFGADVVLNPPE---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDP 279 (350)
T ss_pred EEcCCHHHHHHHHHcCCcEEecCCC---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCC
Confidence 8888999999999999988998877 7788888888877 8999999999765688999999999 999999865432
Q ss_pred CceeechHHH-HhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEE
Q 025101 180 SQLSLSSFEV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 254 (258)
Q Consensus 180 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi 254 (258)
..+....+ ..+++++.++... ...+.++++++.++.+++.+.+++.|+++++.+|++.+++++.. |+++
T Consensus 280 --~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 280 --VTVDWSIIGDRKELDVLGSHLG----PYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred --CccChhHhhcccccEEEEeccC----chhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 22332222 3456777776533 24688999999999887655567999999999999999987755 7764
No 66
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.97 E-value=6.2e-28 Score=201.81 Aligned_cols=221 Identities=26% Similarity=0.407 Sum_probs=188.5
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIG 101 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~ 101 (258)
.|+|++|+.++++.++++|+++++++++.++..+.|||+++.. .++++++++||+|+ +++|++++++++..|+ +|++
T Consensus 118 ~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~ 195 (341)
T cd08297 118 DGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIA 195 (341)
T ss_pred CCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEE
Confidence 5899999999999999999999999999999999999998754 58899999999987 6799999999999999 8999
Q ss_pred EcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCC
Q 025101 102 VDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 180 (258)
Q Consensus 102 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 180 (258)
+++++++.+.++++|++.++++++ .++.+.+.+.+++ ++|++||+.++...+..++++++++ |+++.+|.... .
T Consensus 196 ~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~ 270 (341)
T cd08297 196 IDVGDEKLELAKELGADAFVDFKK---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPG-G 270 (341)
T ss_pred EeCCHHHHHHHHHcCCcEEEcCCC---ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCC-C
Confidence 999999999999999999999887 6788888888866 8999999888777789999999999 99999986542 2
Q ss_pred ceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEee
Q 025101 181 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
..+++...+..++.++.+..... .+.++++++++.++.++. .+ ..|+++++.+|++.+..+... |+++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 271 FIPLDPFDLVLRGITIVGSLVGT---RQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred CCCCCHHHHHhcccEEEEeccCC---HHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 33455556667888888864322 367889999999997653 34 679999999999999988766 998875
No 67
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.96 E-value=8.2e-28 Score=201.40 Aligned_cols=223 Identities=26% Similarity=0.405 Sum_probs=184.1
Q ss_pred cceeeeEEEecc--eEEEcCCCCCccchh-----hcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 025101 24 SSFSEYTVLDIA--HVVKVDPTVPPNRAC-----LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 96 (258)
Q Consensus 24 g~~~~~~~v~~~--~~~~~p~~~~~~~aa-----~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~ 96 (258)
|+|+||+.+|.. .++++|++++++.+. .+...+.+||+++ ...++.+|++++|.|+|++|++++|+|+..|+
T Consensus 115 g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~ 193 (345)
T cd08287 115 GGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGA 193 (345)
T ss_pred CceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 889999999975 899999999873222 1224688899986 57788999999999889999999999999999
Q ss_pred CeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecc
Q 025101 97 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 175 (258)
Q Consensus 97 ~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 175 (258)
..++++++++++.+.++++|++.++++++ .++.+.+.+.+++ ++|+++|++|++..+..++++++++ |+++.+|.
T Consensus 194 ~~v~~~~~~~~~~~~~~~~ga~~v~~~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~ 269 (345)
T cd08287 194 ERIIAMSRHEDRQALAREFGATDIVAERG---EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGV 269 (345)
T ss_pred CEEEEECCCHHHHHHHHHcCCceEecCCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecc
Confidence 55888888888999999999999999987 7788888888776 8999999999877799999999999 99999986
Q ss_pred cCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEEEe
Q 025101 176 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 255 (258)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 255 (258)
... ...++....+.+++++.+..... .+.++++++++.++.+++.+++++.++++++++|++.+.++...|++|+
T Consensus 270 ~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~ 344 (345)
T cd08287 270 PHG--GVELDVRELFFRNVGLAGGPAPV---RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLR 344 (345)
T ss_pred cCC--CCccCHHHHHhcceEEEEecCCc---HHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeC
Confidence 542 33444445567899988764222 4578899999999987765556789999999999999888776699986
Q ss_pred e
Q 025101 256 M 256 (258)
Q Consensus 256 ~ 256 (258)
+
T Consensus 345 ~ 345 (345)
T cd08287 345 P 345 (345)
T ss_pred C
Confidence 4
No 68
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.96 E-value=7.5e-28 Score=201.48 Aligned_cols=243 Identities=23% Similarity=0.397 Sum_probs=195.4
Q ss_pred CCCCccccCCCCceeeeec---------------------------cccceeeeEEEecceEEEcCCCCCccchhhcchh
Q 025101 3 RDQTSRFKDLRGETIHHFV---------------------------SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 55 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~---------------------------~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~ 55 (258)
|.++..|+ +||+|+++. ..|+|++|+++|++.++++|+++++++++++ .+
T Consensus 68 g~~v~~~~--~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~ 144 (343)
T cd08236 68 GSGVDDLA--VGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EP 144 (343)
T ss_pred CCCCCcCC--CCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-ch
Confidence 34555677 999998752 3589999999999999999999999999888 47
Q ss_pred hhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHH
Q 025101 56 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQII 135 (258)
Q Consensus 56 ~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i 135 (258)
+.+||+++. ...+.++++|+|+|+|.+|++++|+|+..|+.+|+++++++++.+.++++|++.++++++ .. .+.+
T Consensus 145 ~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~---~~-~~~~ 219 (343)
T cd08236 145 AAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE---ED-VEKV 219 (343)
T ss_pred HHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc---cc-HHHH
Confidence 889999874 778899999999988999999999999999944999999999999999999988998877 55 7777
Q ss_pred HHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCcee-echHHHHhcCceEEecccCCC--CCCCcHH
Q 025101 136 IDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS-LSSFEVLHSGKILMGSLFGGL--KAKSDIP 211 (258)
Q Consensus 136 ~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 211 (258)
.+..++ ++|++|||+|....+..++++++++ |+++.+|.......+. .+...++.++.++.++..... ..++.++
T Consensus 220 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (343)
T cd08236 220 RELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWR 298 (343)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHH
Confidence 777776 8999999998876689999999999 9999998654321121 233345577888887754321 1145688
Q ss_pred HHHHHHHcCCCCCCcccccccccccHHHHHHHHhc-CCee-EEEE
Q 025101 212 ILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK-GKCL-RCVI 254 (258)
Q Consensus 212 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~-k~vi 254 (258)
++++++.++.+.+.+.+...+++++++++++.+.+ +... |+|+
T Consensus 299 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 299 TALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred HHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 89999999977644446688999999999999988 5555 7764
No 69
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.96 E-value=1e-27 Score=200.10 Aligned_cols=220 Identities=29% Similarity=0.446 Sum_probs=187.0
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|++|+.++.+.++++|+++++++++.++.++.|||+++.....+.++++|||.|+|++|++++++|+..|+ +|+++
T Consensus 117 ~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~ 195 (338)
T cd08254 117 DGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAV 195 (338)
T ss_pred CCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEE
Confidence 48999999999999999999999999999999999999998778889999999999889999999999999999 89999
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCc
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 181 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 181 (258)
++++++.+.++++|++.+++.++ ......+ +...+ ++|+++||+|....+..++++++++ |+++.+|.... .
T Consensus 196 ~~s~~~~~~~~~~g~~~~~~~~~---~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~ 268 (338)
T cd08254 196 DIKEEKLELAKELGADEVLNSLD---DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRD--K 268 (338)
T ss_pred cCCHHHHHHHHHhCCCEEEcCCC---cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCC--C
Confidence 99999999999999988888776 5566666 45555 8999999999877799999999999 99999986533 2
Q ss_pred eeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEee
Q 025101 182 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
..++...+..++.++.++.... .+.+.++++++.++.+++. .+.+++++++++++.+.+++.. |+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 269 LTVDLSDLIARELRIIGSFGGT---PEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred CccCHHHHhhCccEEEEeccCC---HHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 2344455677788888765332 4678889999999977754 4789999999999999988777 998864
No 70
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.96 E-value=1.1e-27 Score=203.22 Aligned_cols=226 Identities=19% Similarity=0.288 Sum_probs=181.7
Q ss_pred ccceeeeEEEecceEEEcCCCC-------Cccchhhcchhhhhhhhhhhhh-cCCCCCCEEEEEccCHHHHHHHHHHHHc
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTV-------PPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLC 94 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~-------~~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~l~~~~ 94 (258)
.|+|++|+.+++..++++|+++ +.+ +++++.++.+||+++... .++++|++|+|+|+|++|++++++++..
T Consensus 148 ~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~ 226 (384)
T cd08265 148 DGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAA 226 (384)
T ss_pred CCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHc
Confidence 6899999999999999999863 444 556666899999998655 6899999999998899999999999999
Q ss_pred CCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCCh-hhHHHHHHhhhcCCceEEE
Q 025101 95 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIV 172 (258)
Q Consensus 95 g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~ 172 (258)
|+.+|+++++++++.+.++++|++.++++++....++.+.+.+++++ ++|+|+|++|+. ..+..++++++++ |+++.
T Consensus 227 G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~ 305 (384)
T cd08265 227 GASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVY 305 (384)
T ss_pred CCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEE
Confidence 98679999988899999999999999988751123788888888887 899999999973 3578999999999 99999
Q ss_pred ecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEE
Q 025101 173 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRC 252 (258)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~ 252 (258)
+|.... ..+++...+..+..++.+..... ....+.++++++.++.++...++++.|+++++++|++...++...|+
T Consensus 306 ~g~~~~--~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kv 381 (384)
T cd08265 306 IGRAAT--TVPLHLEVLQVRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKI 381 (384)
T ss_pred ECCCCC--CCcccHHHHhhCceEEEEeeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceE
Confidence 985432 23334444555677777764221 23568999999999988766567789999999999999766654477
Q ss_pred EE
Q 025101 253 VI 254 (258)
Q Consensus 253 vi 254 (258)
++
T Consensus 382 vv 383 (384)
T cd08265 382 TI 383 (384)
T ss_pred Ee
Confidence 75
No 71
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=99.96 E-value=8.8e-28 Score=204.71 Aligned_cols=226 Identities=19% Similarity=0.253 Sum_probs=185.4
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhh--hcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCeE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRI 99 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v 99 (258)
.|+|+||+.+++..++++|+++++++++.++.++.|||+++.. ..++.+|++++|+|+ |++|++++++++..|+ ++
T Consensus 139 ~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~v 217 (398)
T TIGR01751 139 FGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NP 217 (398)
T ss_pred CccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eE
Confidence 5899999999999999999999999999999999999998754 467889999999997 9999999999999999 88
Q ss_pred EEEcCCcchHHHHHhcCCceEEcCCCCC-------------------CccHHHHHHHhcCC-CCCEEEEecCChhhHHHH
Q 025101 100 IGVDVISEKFEIGKRFGVTEFVNSKNCG-------------------DKSVSQIIIDMTDG-GADYCFECVGLASLVQEA 159 (258)
Q Consensus 100 ~~~~~~~~~~~~~~~~g~~~vi~~~~~~-------------------~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~ 159 (258)
+++++++++.+.++++|++.++|+++.+ ...+.+.+.+.+++ ++|++|||+|... +..+
T Consensus 218 i~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~~ 296 (398)
T TIGR01751 218 VAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPTS 296 (398)
T ss_pred EEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHHH
Confidence 8888899999999999999999876510 01244567777776 8999999999755 8999
Q ss_pred HHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHH
Q 025101 160 YACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 239 (258)
Q Consensus 160 ~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 239 (258)
+++++++ |+++.+|..... ...++...++.++.++.++..+. ..++.++++++.++.+. +.++++++++++++
T Consensus 297 ~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~--~~~~~~~~l~~~~~ 369 (398)
T TIGR01751 297 VFVCRRG-GMVVICGGTTGY-NHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRID--PTLSKVYPLEEIGQ 369 (398)
T ss_pred HHhhccC-CEEEEEccccCC-CCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCcc--cceeeEEcHHHHHH
Confidence 9999999 999999965432 23344445556677777775443 24578899999999665 34678999999999
Q ss_pred HHHHHhcCCee-EEEEeeC
Q 025101 240 AFDLLIKGKCL-RCVIWMG 257 (258)
Q Consensus 240 a~~~~~~~~~~-k~vi~~~ 257 (258)
+++.+.+++.. |+++++.
T Consensus 370 a~~~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 370 AHQDVHRNHHQGNVAVLVL 388 (398)
T ss_pred HHHHHHcCCCCceEEEEeC
Confidence 99999888776 9988763
No 72
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.96 E-value=1.5e-27 Score=201.74 Aligned_cols=224 Identities=23% Similarity=0.296 Sum_probs=183.7
Q ss_pred cceeeeEEEecc--eEEEcCCCCCcc---chhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCe
Q 025101 24 SSFSEYTVLDIA--HVVKVDPTVPPN---RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 98 (258)
Q Consensus 24 g~~~~~~~v~~~--~~~~~p~~~~~~---~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~ 98 (258)
|+|+||+.+|.. .++++|++++++ +++.++.+++|||+++ ...++.+|++|+|.|+|++|++++|+++..|+.+
T Consensus 125 g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~ 203 (375)
T cd08282 125 GGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASR 203 (375)
T ss_pred CeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence 889999999976 899999999998 5677888899999997 7888999999999988999999999999999767
Q ss_pred EEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChh-----------hHHHHHHhhhcCC
Q 025101 99 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS-----------LVQEAYACCRKGW 167 (258)
Q Consensus 99 v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~-----------~~~~~~~~l~~~~ 167 (258)
|+++++++++.+.++++|+ ..+++++ +++.+.+.+.+++++|++|||+|... ++..++++++++
T Consensus 204 vi~~~~~~~~~~~~~~~g~-~~v~~~~---~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~- 278 (375)
T cd08282 204 VYVVDHVPERLDLAESIGA-IPIDFSD---GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG- 278 (375)
T ss_pred EEEECCCHHHHHHHHHcCC-eEeccCc---ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-
Confidence 8889999999999999998 4667776 67888888876667999999998762 488999999999
Q ss_pred ceEEEecccCCC-----------CceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCccccccccccc
Q 025101 168 GKTIVLGVDQPG-----------SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE 236 (258)
Q Consensus 168 G~~v~~g~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 236 (258)
|+++.+|..... ....++...++.++.++.+.... .++.+.++++++.++.+++..+++++|++++
T Consensus 279 g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~ 355 (375)
T cd08282 279 GGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKPSFVVSHVISLED 355 (375)
T ss_pred cEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCChHHcEEEEeeHHH
Confidence 999888864321 11234455566677777665422 2456888999999998876556789999999
Q ss_pred HHHHHHHHhcCCeeEEEEee
Q 025101 237 INSAFDLLIKGKCLRCVIWM 256 (258)
Q Consensus 237 ~~~a~~~~~~~~~~k~vi~~ 256 (258)
+++|++.+.++...|+|+++
T Consensus 356 ~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 356 APEAYARFDKRLETKVVIKP 375 (375)
T ss_pred HHHHHHHHhcCCceEEEeCC
Confidence 99999999988833998863
No 73
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=9e-28 Score=201.49 Aligned_cols=236 Identities=20% Similarity=0.280 Sum_probs=191.1
Q ss_pred CCCCccccCCCCceeeee----------------c---cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhh
Q 025101 3 RDQTSRFKDLRGETIHHF----------------V---SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAA 63 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~----------------~---~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l 63 (258)
|.++..|+ +||+|+.. . ..|+|++|+.++.+.++++|+++++++++++++++.|||+++
T Consensus 93 G~~v~~~~--~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~ 170 (350)
T cd08274 93 GEGVDTAR--IGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML 170 (350)
T ss_pred CCCCCCCC--CCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH
Confidence 34555677 89999863 1 148999999999999999999999999999999999999986
Q ss_pred hhhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-
Q 025101 64 WRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG- 141 (258)
Q Consensus 64 ~~~~~~~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~- 141 (258)
...++++|++|||+|+ |++|++++++++..|+ +++++++++ +.+.++++|++.+++..+ ....+ ...+.+
T Consensus 171 -~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~ 242 (350)
T cd08274 171 -ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVAGAA-KEEAVRALGADTVILRDA---PLLAD--AKALGGE 242 (350)
T ss_pred -hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCC
Confidence 7788999999999997 9999999999999999 788888665 888889999876665544 33333 445555
Q ss_pred CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCC
Q 025101 142 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKE 221 (258)
Q Consensus 142 ~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 221 (258)
++|++||++|+.. ++.++++++++ |+++.+|.... ...+++...++.+++++.++.... ...+.++++++.++.
T Consensus 243 ~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~ 316 (350)
T cd08274 243 PVDVVADVVGGPL-FPDLLRLLRPG-GRYVTAGAIAG-PVVELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGE 316 (350)
T ss_pred CCcEEEecCCHHH-HHHHHHHhccC-CEEEEecccCC-ccccCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCC
Confidence 8999999999865 89999999999 99999985522 223455566677888988876432 457889999999997
Q ss_pred CCCCcccccccccccHHHHHHHHhcCCee-EEEEee
Q 025101 222 LELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
++ +.++++|+++++++|++.+..+... |+++++
T Consensus 317 l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 317 IR--PVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred cc--cccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 65 3467899999999999999887666 888864
No 74
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.96 E-value=6.1e-28 Score=201.86 Aligned_cols=246 Identities=19% Similarity=0.223 Sum_probs=196.7
Q ss_pred CCCCccccCCCCceeeeec-cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-
Q 025101 3 RDQTSRFKDLRGETIHHFV-SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL- 80 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~-~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~- 80 (258)
|.++..|+ +||+|+++. +.|+|++|+.++.+.++++|+++++++++.+++++.|||+++.....+.+|++|||+|+
T Consensus 79 G~~v~~~~--~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~ 156 (341)
T cd08290 79 GSGVKSLK--PGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGAN 156 (341)
T ss_pred CCCCCCCC--CCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccch
Confidence 34455577 999999764 36899999999999999999999999999999999999999877778899999999986
Q ss_pred CHHHHHHHHHHHHcCCCeEEEEcCCc----chHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhH
Q 025101 81 GSIGLAVAEGARLCGATRIIGVDVIS----EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLV 156 (258)
Q Consensus 81 g~~G~~a~~l~~~~g~~~v~~~~~~~----~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~ 156 (258)
|++|++++|+|+..|+ +++++++++ ++.+.++++|++.++++++.+..++...++...++++|++|||+|+.. +
T Consensus 157 g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~ 234 (341)
T cd08290 157 SAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKS-A 234 (341)
T ss_pred hHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcHh-H
Confidence 9999999999999999 888887766 568888899999999887610016777787776557999999999876 7
Q ss_pred HHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCC-------CCcHHHHHHHHHcCCCCCCcccc
Q 025101 157 QEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-------KSDIPILLKRYMDKELELDKFVT 229 (258)
Q Consensus 157 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~ 229 (258)
...+++++++ |+++.+|..... ...++...++.++.++.+.....+.. ...+.++++++.++.+... ..
T Consensus 235 ~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 310 (341)
T cd08290 235 TELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PV 310 (341)
T ss_pred HHHHHHhCCC-CEEEEEeccCCC-CcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cc
Confidence 7899999999 999999854322 23344445577899988876433210 1247788899999976644 33
Q ss_pred ccc---ccccHHHHHHHHhcCCee-EEEEee
Q 025101 230 HEM---KFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 230 ~~~---~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
..+ +++++++|++.+.++... |+++++
T Consensus 311 ~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 311 EKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred cccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 556 999999999999887766 998864
No 75
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.96 E-value=1e-27 Score=200.14 Aligned_cols=238 Identities=14% Similarity=0.140 Sum_probs=187.2
Q ss_pred CCCCccccCCCCceeeeec---cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCC-----CCE
Q 025101 3 RDQTSRFKDLRGETIHHFV---SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV-----GST 74 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~---~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~ 74 (258)
|.++..|+ +||+|+++. ..|+|++|++++++.++++|+++++++++.+++++.|||+++....++.+ |++
T Consensus 74 G~~v~~~~--~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~ 151 (336)
T TIGR02817 74 GDEVTLFK--PGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRA 151 (336)
T ss_pred CCCCCCCC--CCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCE
Confidence 45666787 999999653 35899999999999999999999999999999999999999877788876 999
Q ss_pred EEEEcc-CHHHHHHHHHHHHc-CCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCC
Q 025101 75 VVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 152 (258)
Q Consensus 75 vlI~G~-g~~G~~a~~l~~~~-g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 152 (258)
|||+|+ |++|++++|+|+.. |+ +|+++++++++.++++++|+++++++.+ ++.+.+++..++++|+++|++++
T Consensus 152 vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~----~~~~~i~~~~~~~vd~vl~~~~~ 226 (336)
T TIGR02817 152 LLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK----PLKAQLEKLGLEAVSYVFSLTHT 226 (336)
T ss_pred EEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC----CHHHHHHHhcCCCCCEEEEcCCc
Confidence 999986 99999999999998 99 8999999999999999999999988643 56777777543489999999877
Q ss_pred hhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccC--CCCC-------CCcHHHHHHHHHcCCCC
Q 025101 153 ASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG--GLKA-------KSDIPILLKRYMDKELE 223 (258)
Q Consensus 153 ~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~g~~~ 223 (258)
...+...+++++++ |+++.++.. ..++...+..++.++.+.... .... ...++++++++.++.++
T Consensus 227 ~~~~~~~~~~l~~~-G~~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 300 (336)
T TIGR02817 227 DQHFKEIVELLAPQ-GRFALIDDP-----AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIR 300 (336)
T ss_pred HHHHHHHHHHhccC-CEEEEEccc-----ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCee
Confidence 66689999999999 999987522 123333344445665543222 1000 13467889999999665
Q ss_pred CCccccccc---ccccHHHHHHHHhcCCee-EEEEe
Q 025101 224 LDKFVTHEM---KFEEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 224 ~~~~~~~~~---~~~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
.. +++.+ +++++++|++.+.+++.. |++++
T Consensus 301 ~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 301 TT--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred cc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 32 33444 478999999999988776 88764
No 76
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.96 E-value=2e-29 Score=223.37 Aligned_cols=238 Identities=18% Similarity=0.217 Sum_probs=207.7
Q ss_pred CCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEE-ccCHHHHHHHHH
Q 025101 12 LRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF-GLGSIGLAVAEG 90 (258)
Q Consensus 12 ~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~-G~g~~G~~a~~l 90 (258)
..|.||+++...-++++.+.++.+++|.+|++.++++|+++|+.|.|||+||..+...++|++|||+ |+|++|++||.+
T Consensus 1493 ~~GrRvM~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIai 1572 (2376)
T KOG1202|consen 1493 ASGRRVMGMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAI 1572 (2376)
T ss_pred CCCcEEEEeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHH
Confidence 3699999998888999999999999999999999999999999999999999999999999999999 569999999999
Q ss_pred HHHcCCCeEEEEcCCcchHHHHHh----cCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhc
Q 025101 91 ARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRK 165 (258)
Q Consensus 91 ~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~ 165 (258)
|..+|+ .|+.++.|+||++++.+ +...++-|.++ .++...+...++| |+|+|++....+. ++.+++|++.
T Consensus 1573 ALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRd---tsFEq~vl~~T~GrGVdlVLNSLaeEk-LQASiRCLa~ 1647 (2376)
T KOG1202|consen 1573 ALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSRD---TSFEQHVLWHTKGRGVDLVLNSLAEEK-LQASIRCLAL 1647 (2376)
T ss_pred HHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccccc---ccHHHHHHHHhcCCCeeeehhhhhHHH-HHHHHHHHHh
Confidence 999999 99999999999999865 33567778888 8899999999999 9999999999888 9999999999
Q ss_pred CCceEEEecccCCCCceeechHHHHhcCceEEecccCCCC--CCCcHHHHHHHHHcCCC--CCCcccccccccccHHHHH
Q 025101 166 GWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKEL--ELDKFVTHEMKFEEINSAF 241 (258)
Q Consensus 166 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~a~ 241 (258)
. |+|..+|...-+.+.++.. ..+.||.+++|..+...- ..+++.++..++++|.- -+.|+.+++|+-.++++||
T Consensus 1648 ~-GRFLEIGKfDLSqNspLGM-avfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AF 1725 (2376)
T KOG1202|consen 1648 H-GRFLEIGKFDLSQNSPLGM-AVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAF 1725 (2376)
T ss_pred c-CeeeeecceecccCCcchh-hhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHH
Confidence 9 9999999765544444433 356779999998765432 23567788888887733 2777889999999999999
Q ss_pred HHHhcCCee-EEEEee
Q 025101 242 DLLIKGKCL-RCVIWM 256 (258)
Q Consensus 242 ~~~~~~~~~-k~vi~~ 256 (258)
+++.+++.+ |+|+++
T Consensus 1726 RfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1726 RFMASGKHIGKVVIKV 1741 (2376)
T ss_pred HHHhccCccceEEEEE
Confidence 999999999 999986
No 77
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.96 E-value=2.7e-27 Score=195.48 Aligned_cols=241 Identities=22% Similarity=0.338 Sum_probs=193.6
Q ss_pred CCCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCH
Q 025101 3 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS 82 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~ 82 (258)
|+++..++ +||+|+.+ ..|+|++|+.++++.++++|+++ ..++....++.++++++. ..++++|++++|+|+|+
T Consensus 67 G~~v~~~~--~Gd~V~~~-~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~ 140 (312)
T cd08269 67 GPGVRGLA--VGDRVAGL-SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGF 140 (312)
T ss_pred CCCCcCCC--CCCEEEEe-cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCH
Confidence 34455677 89999965 36899999999999999999988 233322267889999864 78899999999998899
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHH
Q 025101 83 IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYA 161 (258)
Q Consensus 83 ~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~ 161 (258)
+|++++++|+..|++.|+++++++++.++++++|++.+++.+. .++.+.+.+++++ ++|+++||+|........++
T Consensus 141 vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~ 217 (312)
T cd08269 141 IGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---EAIVERVRELTGGAGADVVIEAVGHQWPLDLAGE 217 (312)
T ss_pred HHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC---cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHH
Confidence 9999999999999933999999999999999999988888776 7788889888877 99999999987766899999
Q ss_pred hhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCC-CCCCcHHHHHHHHHcCCCCCCcccccccccccHHHH
Q 025101 162 CCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL-KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSA 240 (258)
Q Consensus 162 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a 240 (258)
+++++ |+++.+|... .....++...+..++.++.+...... ...+.++++++++.++.+.....+.+.|+++++++|
T Consensus 218 ~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a 295 (312)
T cd08269 218 LVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDA 295 (312)
T ss_pred HhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHH
Confidence 99999 9999998654 23344454455667888777643322 123578899999999987765456688999999999
Q ss_pred HHHHhcCCe--eEEEE
Q 025101 241 FDLLIKGKC--LRCVI 254 (258)
Q Consensus 241 ~~~~~~~~~--~k~vi 254 (258)
++.+.+++. +|+++
T Consensus 296 ~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 296 FEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHHhCCCCceEEEe
Confidence 999988754 48876
No 78
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.96 E-value=2.3e-27 Score=198.35 Aligned_cols=241 Identities=23% Similarity=0.378 Sum_probs=192.3
Q ss_pred CCCCccccCCCCceeeee---------------------------ccccceeeeEEEecceEEEcCCCCCccchhhcchh
Q 025101 3 RDQTSRFKDLRGETIHHF---------------------------VSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 55 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~---------------------------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~ 55 (258)
|.++..|+ +||+|++. ...|+|++|++++++.++++|++++.+++ +++.+
T Consensus 71 G~~v~~~~--~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~ 147 (340)
T TIGR00692 71 GPGVEGIK--VGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEP 147 (340)
T ss_pred CCCCCcCC--CCCEEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcch
Confidence 44556677 99999862 24589999999999999999999998655 46668
Q ss_pred hhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHH
Q 025101 56 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQII 135 (258)
Q Consensus 56 ~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i 135 (258)
+.+|++++ .....+|++++|.|+|++|++++|+++..|++.|+++++++++.+.++++|++.++++.+ .++.+.+
T Consensus 148 ~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~l 222 (340)
T TIGR00692 148 LGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK---EDVVKEV 222 (340)
T ss_pred HHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc---cCHHHHH
Confidence 88998875 345678999999888999999999999999944888888888999999999988898877 7788888
Q ss_pred HHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCceeechH-HHHhcCceEEecccCCCCCCCcHHHH
Q 025101 136 IDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF-EVLHSGKILMGSLFGGLKAKSDIPIL 213 (258)
Q Consensus 136 ~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (258)
.+.+++ ++|++|||+|+...+...+++++++ |+++.+|..... ..++.. .+..+++++.+.... ...+.+.++
T Consensus 223 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 297 (340)
T TIGR00692 223 ADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGK--VTIDFTNKVIFKGLTIYGITGR--HMFETWYTV 297 (340)
T ss_pred HHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCC--cccchhhhhhhcceEEEEEecC--CchhhHHHH
Confidence 888776 8999999999876689999999999 999999865322 222222 345567777665411 123457889
Q ss_pred HHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEEEee
Q 025101 214 LKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 256 (258)
Q Consensus 214 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 256 (258)
+++++++.+++.+.+.+.+++++++++++.+.+++..|+++++
T Consensus 298 ~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 298 SRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred HHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 9999999887656677999999999999999877645998864
No 79
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.96 E-value=3e-27 Score=197.42 Aligned_cols=221 Identities=25% Similarity=0.368 Sum_probs=182.6
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHH-cCCCeEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIG 101 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~-~g~~~v~~ 101 (258)
.|+|+||+.++.+.++++|+++++++++.++.++.|||+++ ...++++|++|||+|+|++|++++++++. .|+ +|++
T Consensus 115 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~ 192 (338)
T PRK09422 115 DGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIA 192 (338)
T ss_pred cCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEE
Confidence 48999999999999999999999999999999999999987 77889999999999999999999999998 599 8999
Q ss_pred EcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCc
Q 025101 102 VDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 181 (258)
Q Consensus 102 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 181 (258)
+++++++.++++++|++.++++++ ..++.+.+++..+ ++|.++++.++...+..++++++++ |+++.+|.... .
T Consensus 193 ~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~ 266 (338)
T PRK09422 193 VDINDDKLALAKEVGADLTINSKR--VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPE--S 266 (338)
T ss_pred EeCChHHHHHHHHcCCcEEecccc--cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCC--C
Confidence 999999999999999988888753 1356677777765 6896665556666699999999999 99999986532 2
Q ss_pred eeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEeeC
Q 025101 182 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWMG 257 (258)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~~ 257 (258)
.+++...+..+..++.++..+. .+.++++++++.+|.++. .+ ..++++++++|++.+.++... |+++.+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 267 MDLSIPRLVLDGIEVVGSLVGT---RQDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred ceecHHHHhhcCcEEEEecCCC---HHHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 3445555566788887764322 456889999999997643 35 468999999999999988777 9998765
No 80
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.96 E-value=3.2e-27 Score=197.54 Aligned_cols=241 Identities=21% Similarity=0.334 Sum_probs=191.9
Q ss_pred CCCCccccCCCCceeeeec---------------------------cccceeeeEEEecceEEEcCCCCCccchhhcchh
Q 025101 3 RDQTSRFKDLRGETIHHFV---------------------------SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 55 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~---------------------------~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~ 55 (258)
|.++..++ +||+|++.. .+|+|++|+.++++.++++|+++++++++.+ .+
T Consensus 73 G~~v~~~~--~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~ 149 (341)
T PRK05396 73 GSEVTGFK--VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DP 149 (341)
T ss_pred CCCCCcCC--CCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hH
Confidence 44556677 899988531 3589999999999999999999999888755 46
Q ss_pred hhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHH
Q 025101 56 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQII 135 (258)
Q Consensus 56 ~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i 135 (258)
+.++++++.. ...+|++|+|.|+|++|++++|+++.+|+.+|+++++++++.++++++|++.++++++ .++.+.+
T Consensus 150 ~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~---~~~~~~~ 224 (341)
T PRK05396 150 FGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK---EDLRDVM 224 (341)
T ss_pred HHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc---ccHHHHH
Confidence 6666665432 3458999999988999999999999999856888888899999999999999999887 6788888
Q ss_pred HHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHH
Q 025101 136 IDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILL 214 (258)
Q Consensus 136 ~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (258)
++++++ ++|+||||.|+...++.++++++++ |+++.+|..... .+++...+..+++++.++.... ..+.+..++
T Consensus 225 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~ 299 (341)
T PRK05396 225 AELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGD--MAIDWNKVIFKGLTIKGIYGRE--MFETWYKMS 299 (341)
T ss_pred HHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--CcccHHHHhhcceEEEEEEccC--ccchHHHHH
Confidence 888776 8999999999877799999999999 999999865432 2333455667788887764221 134566788
Q ss_pred HHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEEEEeeC
Q 025101 215 KRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMG 257 (258)
Q Consensus 215 ~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~~ 257 (258)
+++.++ +++.+.+.+.++++++.+|++.+..+...|++++++
T Consensus 300 ~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 300 ALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred HHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 888888 555556778999999999999988876339999764
No 81
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=1.8e-27 Score=196.00 Aligned_cols=234 Identities=18% Similarity=0.242 Sum_probs=188.8
Q ss_pred CCCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-C
Q 025101 3 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-G 81 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g 81 (258)
|.++..|+ +||+|+++...|+|++|+.++.+.++++|+++++++++++++.+.|||+++...... +|++++|+|+ |
T Consensus 67 G~~v~~~~--~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~ 143 (305)
T cd08270 67 AADGSGPA--VGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASG 143 (305)
T ss_pred CCCCCCCC--CCCEEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCc
Confidence 44556677 999999876679999999999999999999999999999999999999987655544 5999999987 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHH
Q 025101 82 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYA 161 (258)
Q Consensus 82 ~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~ 161 (258)
++|++++++++..|+ +|+++++++++.+.++++|++.+++..+ + ..++++|+++|++|+.. +..+++
T Consensus 144 ~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~-------~~~~~~d~vl~~~g~~~-~~~~~~ 210 (305)
T cd08270 144 GVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS----E-------LSGAPVDLVVDSVGGPQ-LARALE 210 (305)
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc----c-------ccCCCceEEEECCCcHH-HHHHHH
Confidence 999999999999999 8999999999999999999876654322 1 12237999999999875 899999
Q ss_pred hhhcCCceEEEecccCCCCceeechHHHHh--cCceEEecccCC-CCCCCcHHHHHHHHHcCCCCCCcccccccccccHH
Q 025101 162 CCRKGWGKTIVLGVDQPGSQLSLSSFEVLH--SGKILMGSLFGG-LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEIN 238 (258)
Q Consensus 162 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 238 (258)
+++++ |+++.+|... .....++...+.. ++.++.++.... ....+.+..+++++.++.++.. +.+++++++++
T Consensus 211 ~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~ 286 (305)
T cd08270 211 LLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEID 286 (305)
T ss_pred HhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHH
Confidence 99999 9999998654 2233344444433 578887776442 1113467888999999977643 66899999999
Q ss_pred HHHHHHhcCCee-EEEEee
Q 025101 239 SAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 239 ~a~~~~~~~~~~-k~vi~~ 256 (258)
+|++.+.++... |+++.+
T Consensus 287 ~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 287 EAAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHHHHcCCCCceEEEeC
Confidence 999999888776 988864
No 82
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.96 E-value=3.6e-27 Score=197.07 Aligned_cols=218 Identities=22% Similarity=0.346 Sum_probs=176.5
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|+||++++++.++++|++++.++++. ..++.+||+++...... +|++|||.|+|++|++++|+++.+|+.+++++
T Consensus 119 ~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~ 196 (339)
T cd08232 119 QGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVAT 196 (339)
T ss_pred CCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEE
Confidence 58999999999999999999999999876 56888999987655555 89999999889999999999999998678999
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhc-CC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCC
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT-DG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 180 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~-~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 180 (258)
++++++.++++++|++.+++.++ .++ .+.. .. ++|++||++|+...++..+++++++ |+++.+|... .
T Consensus 197 ~~s~~~~~~~~~~g~~~vi~~~~---~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~--~ 266 (339)
T cd08232 197 DLADAPLAVARAMGADETVNLAR---DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG--G 266 (339)
T ss_pred CCCHHHHHHHHHcCCCEEEcCCc---hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--C
Confidence 98898889999999988998876 332 2222 22 6999999999766689999999999 9999998543 2
Q ss_pred ceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEee
Q 025101 181 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
....+...++.+++++.+... ..+.+.++++++.++.+++.+.+.++|+++++++|++.+.++... |+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 267 PVPLPLNALVAKELDLRGSFR----FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred CccCcHHHHhhcceEEEEEec----CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 233344444567788877642 235688899999999877666677899999999999999877656 999864
No 83
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.96 E-value=1.1e-27 Score=199.22 Aligned_cols=244 Identities=13% Similarity=0.190 Sum_probs=192.2
Q ss_pred CCCCccccCCCCceeeeec-cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-
Q 025101 3 RDQTSRFKDLRGETIHHFV-SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL- 80 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~-~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~- 80 (258)
|.++..++ +||+|+... +.|+|++|+.++...++++|+++++++++.+++++.+||.++.....+.+|++++|+|+
T Consensus 73 G~~v~~~~--~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~ 150 (327)
T PRK10754 73 GSGVKHIK--VGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAA 150 (327)
T ss_pred CCCCCCCC--CCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCC
Confidence 33455566 899998542 45899999999999999999999999999998899999998877788999999999975
Q ss_pred CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHH
Q 025101 81 GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEA 159 (258)
Q Consensus 81 g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~ 159 (258)
|.+|++++++++..|+ +|+++++++++.++++++|++.+++.++ .++.+.+++.+++ ++|++|||+|+.. +...
T Consensus 151 g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~ 225 (327)
T PRK10754 151 GGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYRE---ENIVERVKEITGGKKVRVVYDSVGKDT-WEAS 225 (327)
T ss_pred cHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCCC---CcHHHHHHHHcCCCCeEEEEECCcHHH-HHHH
Confidence 9999999999999999 8999999999999999999988888877 7788888888887 8999999999865 8889
Q ss_pred HHhhhcCCceEEEecccCCCCceeechHHHHhcCce------EEecccCCC-CCCCcHHHHHHHHHcCCCCCCccccccc
Q 025101 160 YACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI------LMGSLFGGL-KAKSDIPILLKRYMDKELELDKFVTHEM 232 (258)
Q Consensus 160 ~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 232 (258)
+++++++ |+++.+|..... ....+...+..++.. +.+.. ... ...+.+.++++++.+|.+++..+..+.|
T Consensus 226 ~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~ 302 (327)
T PRK10754 226 LDCLQRR-GLMVSFGNASGP-VTGVNLGILNQKGSLYVTRPSLQGYI-TTREELTEASNELFSLIASGVIKVDVAEQQKF 302 (327)
T ss_pred HHHhccC-CEEEEEccCCCC-CCCcCHHHHhccCceEEecceeeccc-CCHHHHHHHHHHHHHHHHCCCeeeecccCcEE
Confidence 9999999 999999865421 112222222222211 11110 000 0012345688899999887655566899
Q ss_pred ccccHHHHHHHHhcCCee-EEEEee
Q 025101 233 KFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 233 ~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
+++++.+|++.++++... |+|+++
T Consensus 303 ~~~~~~~a~~~~~~~~~~~~~~~~~ 327 (327)
T PRK10754 303 PLKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_pred cHHHHHHHHHHHHcCCCcceEEEeC
Confidence 999999999999888766 999864
No 84
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.96 E-value=5.6e-27 Score=197.70 Aligned_cols=223 Identities=25% Similarity=0.422 Sum_probs=178.9
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|+||+.+++..++++|++++++++++.. ++.++++++ ...++.+|++|+|+|+|++|++++++++..|+..++++
T Consensus 135 ~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~ 212 (364)
T PLN02702 135 HGSLANQVVHPADLCFKLPENVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIV 212 (364)
T ss_pred CCcccceEEcchHHeEECCCCCCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 5899999999999999999999999887633 555688876 77888999999999999999999999999999668888
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHh---cCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCC
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM---TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 179 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~---~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 179 (258)
++++++.+.++++|++.++++.. ..+++.+.+.++ .++++|+|||++|....+..++++++++ |+++.+|....
T Consensus 213 ~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~- 289 (364)
T PLN02702 213 DVDDERLSVAKQLGADEIVLVST-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN- 289 (364)
T ss_pred CCCHHHHHHHHHhCCCEEEecCc-ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC-
Confidence 88889999999999987766432 014566666554 2338999999999766699999999999 99999986533
Q ss_pred CceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCccccccccc--ccHHHHHHHHhcCCee-EEEEe
Q 025101 180 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKF--EEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
........+..+++++.+++.. ...+..+++++.++.+.+.++++++|++ +++++|++.+.+++.. |+++.
T Consensus 290 -~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 290 -EMTVPLTPAAAREVDVVGVFRY----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred -CCcccHHHHHhCccEEEEeccC----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 2334455567778898887532 3568889999999988766667788555 7999999998887665 99885
No 85
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.96 E-value=2.4e-27 Score=197.92 Aligned_cols=216 Identities=22% Similarity=0.346 Sum_probs=180.9
Q ss_pred cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEE
Q 025101 22 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIG 101 (258)
Q Consensus 22 ~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~ 101 (258)
..|+|+||+.++++.++++|+++++++++.+++.+.+||+++. ...+.+|++++|.|+|++|++++++++..|+ +|++
T Consensus 121 ~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~-~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~ 198 (337)
T cd05283 121 TQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLK-RNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTA 198 (337)
T ss_pred CCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEE
Confidence 3589999999999999999999999999999999999999864 4568999999999889999999999999999 8999
Q ss_pred EcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCc
Q 025101 102 VDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 181 (258)
Q Consensus 102 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 181 (258)
+++++++.++++++|++.+++.++ .+.... .++++|++|||+|....+..++++++++ |+++.+|.....
T Consensus 199 ~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~-- 268 (337)
T cd05283 199 FSRSPSKKEDALKLGADEFIATKD---PEAMKK----AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEP-- 268 (337)
T ss_pred EcCCHHHHHHHHHcCCcEEecCcc---hhhhhh----ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCC--
Confidence 999999999999999988888765 333221 1238999999999875589999999999 999999865432
Q ss_pred eeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEe
Q 025101 182 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
..++...++.+++++.++.... .++++.+++++.++.++. .+ +.|+++++++||+.+++++.. |+|++
T Consensus 269 ~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 269 LPVPPFPLIFGRKSVAGSLIGG---RKETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred CccCHHHHhcCceEEEEecccC---HHHHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 2445556677899999986543 467889999999997653 34 789999999999999998877 88874
No 86
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.96 E-value=7.3e-27 Score=194.77 Aligned_cols=219 Identities=26% Similarity=0.456 Sum_probs=179.9
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|++|+.++++.++++|+++++.+++.+ .++.++++++ ...++++|++|||+|+|.+|++++++++..|+++|+++
T Consensus 113 ~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~ 190 (334)
T cd08234 113 NGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVA 190 (334)
T ss_pred CCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEE
Confidence 589999999999999999999999998876 6788999987 78899999999999889999999999999999448889
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCc
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 181 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 181 (258)
++++++.+.++++|++.+++..+ .+.... +.+.+ ++|++||++|....+..++++++++ |+++.+|.......
T Consensus 191 ~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~ 264 (334)
T cd08234 191 EPNEEKLELAKKLGATETVDPSR---EDPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDAR 264 (334)
T ss_pred CCCHHHHHHHHHhCCeEEecCCC---CCHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCC
Confidence 99999999999999888888776 555444 33344 8999999998766689999999999 99999986543333
Q ss_pred eeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEE
Q 025101 182 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 254 (258)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi 254 (258)
.+++...+..+++++.+.... .+.++++++++.++.+...+.+..+++++++.+|++.+.+ ... |+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 265 VSISPFEIFQKELTIIGSFIN----PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred cccCHHHHHhCCcEEEEeccC----HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 445555555567888776532 3568889999999987765556688999999999999988 555 8876
No 87
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.96 E-value=9.9e-27 Score=194.56 Aligned_cols=221 Identities=24% Similarity=0.395 Sum_probs=178.4
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|++|++++.+.++++|++++.+.+ +++.++.++++++. ....+|++|||+|+|++|++++|+++..|..+|+++
T Consensus 118 ~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~ 194 (341)
T cd05281 118 DGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIAS 194 (341)
T ss_pred CCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEE
Confidence 589999999999999999999998555 55557888888754 455789999999889999999999999998568888
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCc
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 181 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 181 (258)
+++++|.+.++++|++++++.+. .++. .+.+..++ ++|++|||+|+......++++++++ |+++.+|.....
T Consensus 195 ~~~~~~~~~~~~~g~~~~~~~~~---~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~-- 267 (341)
T cd05281 195 DPNPYRLELAKKMGADVVINPRE---EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGP-- 267 (341)
T ss_pred CCCHHHHHHHHHhCcceeeCccc---ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCC--
Confidence 88889999999999988888776 6677 78887776 9999999999877689999999999 999999865432
Q ss_pred eeechH-HHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEee
Q 025101 182 LSLSSF-EVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 182 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
..++.. ....++..+.+.... ...+.+.++++++.++.+.+.+.+...++++++++||+.+.+++ . |+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 268 VDIDLNNLVIFKGLTVQGITGR--KMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred cccccchhhhccceEEEEEecC--CcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 222222 245567777765421 12356788999999998776666778899999999999999888 6 998864
No 88
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.96 E-value=5.1e-27 Score=194.57 Aligned_cols=218 Identities=22% Similarity=0.319 Sum_probs=177.0
Q ss_pred ceeeee-ccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHH
Q 025101 15 ETIHHF-VSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL 93 (258)
Q Consensus 15 ~~v~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~ 93 (258)
+++.++ ...|+|++|++++.+.++++|++++.++++.+ .++.++++. .+..++++|++|||+|+|++|++++|+++.
T Consensus 100 ~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~-~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~ 177 (319)
T cd08242 100 RTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEI-LEQVPITPGDKVAVLGDGKLGLLIAQVLAL 177 (319)
T ss_pred CcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 334443 23589999999999999999999999888864 355666664 477889999999999999999999999999
Q ss_pred cCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEE
Q 025101 94 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIV 172 (258)
Q Consensus 94 ~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 172 (258)
+|+ +|++++.++++.++++++|++.++++++ . +.+ ++|++|||+|+...+..++++++++ |+++.
T Consensus 178 ~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~ 243 (319)
T cd08242 178 TGP-DVVLVGRHSEKLALARRLGVETVLPDEA---E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVL 243 (319)
T ss_pred cCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc---c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEE
Confidence 999 7999999999999999999988877654 1 233 8999999999876689999999999 99998
Q ss_pred ecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCeeEE
Q 025101 173 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRC 252 (258)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~ 252 (258)
.+.... ...++...+..++.++.+...+ .++++++++.++.+++.+.+++.|+++++++||+.+.++...|+
T Consensus 244 ~~~~~~--~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~ 315 (319)
T cd08242 244 KSTYAG--PASFDLTKAVVNEITLVGSRCG------PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKV 315 (319)
T ss_pred EcccCC--CCccCHHHheecceEEEEEecc------cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEE
Confidence 765432 2344555566778888877422 38889999999988766668899999999999999987765599
Q ss_pred EEee
Q 025101 253 VIWM 256 (258)
Q Consensus 253 vi~~ 256 (258)
++++
T Consensus 316 vi~~ 319 (319)
T cd08242 316 LLRP 319 (319)
T ss_pred EeCC
Confidence 8864
No 89
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.96 E-value=7.7e-27 Score=193.27 Aligned_cols=234 Identities=22% Similarity=0.325 Sum_probs=188.5
Q ss_pred cccCCCCceeeeecc------ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-
Q 025101 8 RFKDLRGETIHHFVS------VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL- 80 (258)
Q Consensus 8 ~~~~~~G~~v~~~~~------~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~- 80 (258)
.++ +||+|+++.. .|+|++|+.+++..++++|+++++++++.+++++.+||+++.....+++|++|||+|+
T Consensus 75 ~~~--~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~ 152 (320)
T cd08243 75 TFT--PGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGT 152 (320)
T ss_pred CCC--CCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 456 8999997642 3899999999999999999999999999999999999999887788999999999997
Q ss_pred CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHH
Q 025101 81 GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAY 160 (258)
Q Consensus 81 g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~ 160 (258)
|++|++++|+|+..|+ +|+++++++++.+.++++|++++++. . .++.+.+.+. +.++|+++|++|+.. +...+
T Consensus 153 g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~-~---~~~~~~i~~~-~~~~d~vl~~~~~~~-~~~~~ 225 (320)
T cd08243 153 SSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID-D---GAIAEQLRAA-PGGFDKVLELVGTAT-LKDSL 225 (320)
T ss_pred ChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-C---ccHHHHHHHh-CCCceEEEECCChHH-HHHHH
Confidence 9999999999999999 89999999999999999999887754 4 4677778777 448999999999865 89999
Q ss_pred HhhhcCCceEEEecccCCCCce-eechHHH--HhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccH
Q 025101 161 ACCRKGWGKTIVLGVDQPGSQL-SLSSFEV--LHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 237 (258)
Q Consensus 161 ~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 237 (258)
++++++ |+++.+|........ ....... +.+++++.++...... ...+.++++++.++.++. ..++.++++++
T Consensus 226 ~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~ 301 (320)
T cd08243 226 RHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVP-QTPLQELFDFVAAGHLDI--PPSKVFTFDEI 301 (320)
T ss_pred HHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhh-HHHHHHHHHHHHCCceec--ccccEEcHHHH
Confidence 999999 999999964332211 1112222 2557777666533221 235778889999997654 35688999999
Q ss_pred HHHHHHHhcCCee-EEEE
Q 025101 238 NSAFDLLIKGKCL-RCVI 254 (258)
Q Consensus 238 ~~a~~~~~~~~~~-k~vi 254 (258)
++|++.+.++... |+++
T Consensus 302 ~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 302 VEAHAYMESNRAFGKVVV 319 (320)
T ss_pred HHHHHHHHhCCCCCcEEe
Confidence 9999999887666 7765
No 90
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.96 E-value=1.3e-26 Score=193.59 Aligned_cols=236 Identities=22% Similarity=0.312 Sum_probs=186.4
Q ss_pred CCCCccccCCCCceeeeecc--------ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCC-----
Q 025101 3 RDQTSRFKDLRGETIHHFVS--------VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANV----- 69 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~--------~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~----- 69 (258)
|+++..|+ +||+|+++.. +|+|++|++++.+.++++|+++++++++.+++++.|||+++....++
T Consensus 70 G~~v~~~~--~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~ 147 (339)
T cd08249 70 GSGVTRFK--VGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPP 147 (339)
T ss_pred CCCcCcCC--CCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCC
Confidence 45566677 9999997643 48999999999999999999999999999999999999987665544
Q ss_pred -----CCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCC
Q 025101 70 -----EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGA 143 (258)
Q Consensus 70 -----~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~ 143 (258)
.++++++|+|+ |++|++++++++..|+ +|++++ ++++.+.++++|++++++.++ .++.+.+++.+++++
T Consensus 148 ~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~~~~ 222 (339)
T cd08249 148 KPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYHD---PDVVEDIRAATGGKL 222 (339)
T ss_pred CCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECCC---chHHHHHHHhcCCCe
Confidence 78999999997 8999999999999999 888887 568999999999999999887 778888887776689
Q ss_pred CEEEEecCChhhHHHHHHhhhc--CCceEEEecccCCCCceeechHHHHhcCceEEecccC---------CCCCCCcHHH
Q 025101 144 DYCFECVGLASLVQEAYACCRK--GWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG---------GLKAKSDIPI 212 (258)
Q Consensus 144 d~v~d~~g~~~~~~~~~~~l~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 212 (258)
|++||++|.+..+..+++++++ + |+++.+|...... .+ ..+.++...... .......+.+
T Consensus 223 d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (339)
T cd08249 223 RYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--EP------RKGVKVKFVLGYTVFGEIPEDREFGEVFWKY 293 (339)
T ss_pred eEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--cC------CCCceEEEEEeeeecccccccccchHHHHHH
Confidence 9999999985559999999999 9 9999998654321 01 112222111111 1111245677
Q ss_pred HHHHHHcCCCCCCcccccccc--cccHHHHHHHHhcCC-ee-EEEEee
Q 025101 213 LLKRYMDKELELDKFVTHEMK--FEEINSAFDLLIKGK-CL-RCVIWM 256 (258)
Q Consensus 213 ~~~~~~~g~~~~~~~~~~~~~--~~~~~~a~~~~~~~~-~~-k~vi~~ 256 (258)
+++++.++.+.+.+ ...++ ++++++|++.+..++ .. |+++++
T Consensus 294 ~~~~~~~~~l~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 294 LPELLEEGKLKPHP--VRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHHHcCCccCCC--ceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 88899999777653 34556 999999999999887 66 999864
No 91
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.96 E-value=2e-26 Score=190.37 Aligned_cols=243 Identities=19% Similarity=0.258 Sum_probs=197.1
Q ss_pred CCCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-C
Q 025101 3 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-G 81 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g 81 (258)
|+++..++ +||+|+++...|+|++|+.++.+.++++|++++.++++.++..+.++++++.+..++.+|++|+|+|+ |
T Consensus 70 g~~~~~~~--~G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g 147 (320)
T cd05286 70 GPGVTGFK--VGDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAG 147 (320)
T ss_pred CCCCCCCC--CCCEEEEecCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence 34555677 99999976436899999999999999999999999999999999999999877888999999999995 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHH
Q 025101 82 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAY 160 (258)
Q Consensus 82 ~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~ 160 (258)
++|++++++++..|+ +|+++++++++.+.++++|++.+++..+ .++.+.+.+.+.+ ++|.++||+++.. ...++
T Consensus 148 ~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~ 222 (320)
T cd05286 148 GVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRD---EDFVERVREITGGRGVDVVYDGVGKDT-FEGSL 222 (320)
T ss_pred hHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCCc---hhHHHHHHHHcCCCCeeEEEECCCcHh-HHHHH
Confidence 999999999999999 8999999999999999999988888776 6788888888776 8999999999864 88999
Q ss_pred HhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCC-----CCcHHHHHHHHHcCCCCCCcccccccccc
Q 025101 161 ACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-----KSDIPILLKRYMDKELELDKFVTHEMKFE 235 (258)
Q Consensus 161 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 235 (258)
++++++ |+++.+|..... ...++...+..+++++.+........ .+.+.++++++.++.+... .++.|+++
T Consensus 223 ~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~ 298 (320)
T cd05286 223 DSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE--IGKRYPLA 298 (320)
T ss_pred HhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHH
Confidence 999999 999999865432 22233333446788876543222211 1234567888888866543 56889999
Q ss_pred cHHHHHHHHhcCCee-EEEEee
Q 025101 236 EINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 236 ~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
++++|++.+..+... |+++++
T Consensus 299 ~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 299 DAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred HHHHHHHHHHcCCCCceEEEeC
Confidence 999999999887766 888764
No 92
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.95 E-value=3.6e-27 Score=183.09 Aligned_cols=242 Identities=21% Similarity=0.266 Sum_probs=195.3
Q ss_pred CCCCccccCCCCceeeeeccccceeeeEEEecce--EEEcCC--CCCccc-hhhcchhhhhhhhhhhhhcCCCCCCEEEE
Q 025101 3 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH--VVKVDP--TVPPNR-ACLLSCGVSTGVGAAWRTANVEVGSTVVI 77 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~--~~~~p~--~~~~~~-aa~~~~~~~ta~~~l~~~~~~~~g~~vlI 77 (258)
.++.|.+. +||.|++.. +|.||.+++... .+++|. +.++.. ..++..+..|||..+.+...+++|++|+|
T Consensus 85 ~S~~~~~~--~GD~v~g~~---gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~V 159 (343)
T KOG1196|consen 85 DSGHPNYK--KGDLVWGIV---GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFV 159 (343)
T ss_pred ecCCCCCC--cCceEEEec---cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEE
Confidence 35788898 999999887 599999997754 345544 343333 34466789999999999999999999999
Q ss_pred Ecc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCceEEcCCCCCCc-cHHHHHHHhcCCCCCEEEEecCChh
Q 025101 78 FGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDK-SVSQIIIDMTDGGADYCFECVGLAS 154 (258)
Q Consensus 78 ~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~ 154 (258)
.|| |++|+++.|+|+.+|+ +|++.+.+++|.++++. +|.+..+||++ + +..+.+++..++++|+-||++|+..
T Consensus 160 SaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~---e~~~~~aL~r~~P~GIDiYfeNVGG~~ 235 (343)
T KOG1196|consen 160 SAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE---ESDLSAALKRCFPEGIDIYFENVGGKM 235 (343)
T ss_pred eeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC---ccCHHHHHHHhCCCcceEEEeccCcHH
Confidence 986 9999999999999999 99999999999999865 79999999999 6 8889999988889999999999988
Q ss_pred hHHHHHHhhhcCCceEEEecccCC---CCceee-chHHHHhcCceEEecccCCCCC--CCcHHHHHHHHHcCCCCCCccc
Q 025101 155 LVQEAYACCRKGWGKTIVLGVDQP---GSQLSL-SSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKELELDKFV 228 (258)
Q Consensus 155 ~~~~~~~~l~~~~G~~v~~g~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~ 228 (258)
++..+..++.. |+++.||..+. ..+..+ +...++.|++++.|+....... .+-+..+..++.+|+++...-+
T Consensus 236 -lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi 313 (343)
T KOG1196|consen 236 -LDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDI 313 (343)
T ss_pred -HHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhH
Confidence 99999999998 99999997652 111122 2344678899999976444321 2445677788899988877544
Q ss_pred ccccccccHHHHHHHHhcCCee-EEEEeeC
Q 025101 229 THEMKFEEINSAFDLLIKGKCL-RCVIWMG 257 (258)
Q Consensus 229 ~~~~~~~~~~~a~~~~~~~~~~-k~vi~~~ 257 (258)
. -.++....||.-+.+++++ |.++.+.
T Consensus 314 ~--~Glen~P~A~vglf~GkNvGKqiv~va 341 (343)
T KOG1196|consen 314 A--DGLENGPSALVGLFHGKNVGKQLVKVA 341 (343)
T ss_pred H--HHHhccHHHHHHHhccCcccceEEEee
Confidence 3 3599999999999999998 9998875
No 93
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.95 E-value=1.6e-26 Score=192.05 Aligned_cols=238 Identities=17% Similarity=0.228 Sum_probs=182.0
Q ss_pred ccccCCCCceeeeec------cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhc--C-CCCCCEEEE
Q 025101 7 SRFKDLRGETIHHFV------SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA--N-VEVGSTVVI 77 (258)
Q Consensus 7 ~~~~~~~G~~v~~~~------~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~--~-~~~g~~vlI 77 (258)
..|+ +||+|+... ..|+|+||+.++++.++++|+++++++++.+++++.||++++.... . ...+++|||
T Consensus 75 ~~~~--~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI 152 (326)
T cd08289 75 PRFK--PGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLV 152 (326)
T ss_pred CCCC--CCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEE
Confidence 3466 899998653 3689999999999999999999999999999999999998864332 2 334789999
Q ss_pred Ecc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhH
Q 025101 78 FGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLV 156 (258)
Q Consensus 78 ~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~ 156 (258)
+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.+++.++ . ..+.+.+..++++|++||++|+.. +
T Consensus 153 ~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~-~~~~~~~~~~~~~d~vld~~g~~~-~ 226 (326)
T cd08289 153 TGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREE---L-QEESIKPLEKQRWAGAVDPVGGKT-L 226 (326)
T ss_pred EcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchh---H-HHHHHHhhccCCcCEEEECCcHHH-H
Confidence 997 9999999999999999 8999999999999999999988888765 3 345566654348999999999855 8
Q ss_pred HHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCC---CCcccccccc
Q 025101 157 QEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELE---LDKFVTHEMK 233 (258)
Q Consensus 157 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~ 233 (258)
...+++++++ |+++.+|.... ...+.+...++.+++++.+....... ......+++.+.+ .+. ....+.++|+
T Consensus 227 ~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 302 (326)
T cd08289 227 AYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLGIDSVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEIT 302 (326)
T ss_pred HHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEEEEeEecC-chHHHHHHHHHHh-hcCccccccccceEee
Confidence 9999999999 99999996532 22333344555778998887422110 1122333333332 122 2223578999
Q ss_pred cccHHHHHHHHhcCCee-EEEEee
Q 025101 234 FEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 234 ~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
++++++||+.+.+++.. |+++++
T Consensus 303 l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 303 LDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred HHHHHHHHHHHhcCcccceEEEeC
Confidence 99999999999988777 988763
No 94
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=99.95 E-value=6.2e-27 Score=180.81 Aligned_cols=244 Identities=19% Similarity=0.243 Sum_probs=190.0
Q ss_pred CCCCccccCCCCceeeeec-cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-
Q 025101 3 RDQTSRFKDLRGETIHHFV-SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL- 80 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~-~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~- 80 (258)
|+++..|+ +||+|.... +.|+|++|.+.+++.++++++.++++.||++..+.+|||.+|.....+.+|++|+-.|+
T Consensus 93 Gs~vkgfk--~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNgan 170 (354)
T KOG0025|consen 93 GSNVKGFK--PGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGAN 170 (354)
T ss_pred cCCcCccC--CCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcc
Confidence 56777788 999998553 45999999999999999999999999999999999999999988999999999888887
Q ss_pred CHHHHHHHHHHHHcCCCeEEEEcCCcchHH----HHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhh
Q 025101 81 GSIGLAVAEGARLCGATRIIGVDVISEKFE----IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASL 155 (258)
Q Consensus 81 g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~----~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~ 155 (258)
+++|++.+|+||++|+ +-+-+.|+....+ .++.+||++||...++.+.+.. +..... .+.+.|||+|+..
T Consensus 171 S~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~---k~~~~~~~prLalNcVGGks- 245 (354)
T KOG0025|consen 171 SGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMK---KFKGDNPRPRLALNCVGGKS- 245 (354)
T ss_pred cHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhh---hhhccCCCceEEEeccCchh-
Confidence 8999999999999999 5555555555444 3566999999966552211111 111122 7999999999988
Q ss_pred HHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCC--------CcHHHHHHHHHcCCCCCCcc
Q 025101 156 VQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAK--------SDIPILLKRYMDKELELDKF 227 (258)
Q Consensus 156 ~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~ 227 (258)
..++.+.|..+ |.++.+|..+. ++..++...++.|++.++|++...|... +.+.++.+++..|++..+
T Consensus 246 a~~iar~L~~G-gtmvTYGGMSk-qPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~-- 321 (354)
T KOG0025|consen 246 ATEIARYLERG-GTMVTYGGMSK-QPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP-- 321 (354)
T ss_pred HHHHHHHHhcC-ceEEEecCccC-CCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc--
Confidence 77889999999 99999996554 6778888888999999999998887642 246678889999977655
Q ss_pred cccccccccHHHHHHHHhcCCe--eEEEEeeC
Q 025101 228 VTHEMKFEEINSAFDLLIKGKC--LRCVIWMG 257 (258)
Q Consensus 228 ~~~~~~~~~~~~a~~~~~~~~~--~k~vi~~~ 257 (258)
-.+..++++...|++..-.... .|-+|.++
T Consensus 322 ~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 322 NCEKVPLADHKTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred cceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence 3356678887777775433322 25555543
No 95
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.95 E-value=2.9e-26 Score=190.33 Aligned_cols=236 Identities=17% Similarity=0.199 Sum_probs=183.8
Q ss_pred CccccCCCCceeeeec------cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhh--cCCCCCC-EEE
Q 025101 6 TSRFKDLRGETIHHFV------SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGS-TVV 76 (258)
Q Consensus 6 ~~~~~~~~G~~v~~~~------~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~-~vl 76 (258)
+..|+ +||+|+.+. ..|+|++|+.+|++.++++|+++++++++++++.+.+|+.++... ..+.+|+ +|+
T Consensus 73 ~~~~~--~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vl 150 (323)
T TIGR02823 73 DPRFR--EGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVL 150 (323)
T ss_pred CCCCC--CCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEE
Confidence 34566 999999653 358999999999999999999999999999999999998876433 3478898 999
Q ss_pred EEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhh
Q 025101 77 IFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASL 155 (258)
Q Consensus 77 I~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~ 155 (258)
|+|+ |++|++++++|+..|+ +++++++++++.++++++|++.+++.++ .+. .++...++++|.++||+|+..
T Consensus 151 I~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~~--~~~~~~~~~~d~vld~~g~~~- 223 (323)
T TIGR02823 151 VTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVIDRED---LSP--PGKPLEKERWAGAVDTVGGHT- 223 (323)
T ss_pred EEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEcccc---HHH--HHHHhcCCCceEEEECccHHH-
Confidence 9997 9999999999999999 8888888888889999999988888654 222 444554447999999999875
Q ss_pred HHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCC---CCcHHHHHHHHHcCCCCCCccccccc
Q 025101 156 VQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEM 232 (258)
Q Consensus 156 ~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~ 232 (258)
+...+++++++ |+++.+|.... ...+.+...++.++.++.+........ .+.+..+.+++..+.+.. . .+.|
T Consensus 224 ~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~ 298 (323)
T TIGR02823 224 LANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLES--I-TREI 298 (323)
T ss_pred HHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcC--c-eeee
Confidence 89999999999 99999996532 233344445557789988865332111 112445555666775442 3 4689
Q ss_pred ccccHHHHHHHHhcCCee-EEEEe
Q 025101 233 KFEEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 233 ~~~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
+++++++|++.+.+++.. |+++.
T Consensus 299 ~l~~~~~a~~~~~~~~~~~k~vv~ 322 (323)
T TIGR02823 299 TLEELPEALEQILAGQHRGRTVVD 322 (323)
T ss_pred cHHHHHHHHHHHhCCCccceEEEe
Confidence 999999999999988777 88875
No 96
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=5e-26 Score=189.69 Aligned_cols=240 Identities=22% Similarity=0.354 Sum_probs=199.3
Q ss_pred CCCCccccCCCCceeeeec---------------------cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhh
Q 025101 3 RDQTSRFKDLRGETIHHFV---------------------SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVG 61 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~---------------------~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 61 (258)
|.++..++ +||+|+... ..|+|++|+.++.+.++++|+++++.+++.+++++.+||+
T Consensus 73 G~~~~~~~--~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~ 150 (336)
T cd08276 73 GEGVTRFK--VGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWN 150 (336)
T ss_pred CCCCcCCC--CCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHH
Confidence 34455677 899998653 1578999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC
Q 025101 62 AAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG 141 (258)
Q Consensus 62 ~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~ 141 (258)
++.....+.+|++++|+|+|++|++++++++..|+ +|+++++++++.+.++++|++.+++... ..++.+.+.+.+++
T Consensus 151 ~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~ 227 (336)
T cd08276 151 ALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRT--TPDWGEEVLKLTGG 227 (336)
T ss_pred HHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCc--ccCHHHHHHHHcCC
Confidence 98777889999999999889999999999999999 8999999999999999999988887654 14577788888876
Q ss_pred -CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcC
Q 025101 142 -GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 220 (258)
Q Consensus 142 -~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 220 (258)
++|.++|+++... +..++++++++ |+++.+|..... ........++.+++++.+...+. ...+.++++++.++
T Consensus 228 ~~~d~~i~~~~~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~ 301 (336)
T cd08276 228 RGVDHVVEVGGPGT-LAQSIKAVAPG-GVISLIGFLSGF-EAPVLLLPLLTKGATLRGIAVGS---RAQFEAMNRAIEAH 301 (336)
T ss_pred CCCcEEEECCChHH-HHHHHHhhcCC-CEEEEEccCCCC-ccCcCHHHHhhcceEEEEEecCc---HHHHHHHHHHHHcC
Confidence 8999999998665 88999999999 999999965442 22344556678899999886443 45788899999888
Q ss_pred CCCCCcccccccccccHHHHHHHHhcCCee-EEEEe
Q 025101 221 ELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
.+.. ..++.|++++++++++.+.++... |++++
T Consensus 302 ~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 302 RIRP--VIDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred Cccc--ccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 6553 356889999999999999887766 88875
No 97
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.95 E-value=2.5e-26 Score=190.74 Aligned_cols=236 Identities=18% Similarity=0.199 Sum_probs=180.3
Q ss_pred ccccCCCCceeeeec------cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcC--CC-CCCEEEE
Q 025101 7 SRFKDLRGETIHHFV------SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN--VE-VGSTVVI 77 (258)
Q Consensus 7 ~~~~~~~G~~v~~~~------~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~--~~-~g~~vlI 77 (258)
..|+ +||+|+... ..|+|++|++++++.++++|+++++++++.+++.+.+||+++..... +. .+++|+|
T Consensus 75 ~~~~--~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI 152 (325)
T cd05280 75 PRFR--EGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLV 152 (325)
T ss_pred CCCC--CCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEE
Confidence 3466 899999642 36899999999999999999999999999999999999998755433 35 3579999
Q ss_pred Ecc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcC-CCCCEEEEecCChhh
Q 025101 78 FGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD-GGADYCFECVGLASL 155 (258)
Q Consensus 78 ~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~-~~~d~v~d~~g~~~~ 155 (258)
+|+ |++|++++++++..|+ +|+++++++++.++++++|++++++.++ . ...+.+... +++|++||++|+..
T Consensus 153 ~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~--~~~~~~~~~~~~~d~vi~~~~~~~- 225 (325)
T cd05280 153 TGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVLDRED---L--LDESKKPLLKARWAGAIDTVGGDV- 225 (325)
T ss_pred ECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEcchh---H--HHHHHHHhcCCCccEEEECCchHH-
Confidence 997 9999999999999999 7999999999999999999998887654 2 222333333 38999999999865
Q ss_pred HHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCC---CCcHHHHHHHHHcCCCCCCccccccc
Q 025101 156 VQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEM 232 (258)
Q Consensus 156 ~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~ 232 (258)
+...+++++++ |+++.+|...... ..++...++.+++++.+........ ...++.+.+++..+. .+.+..+|
T Consensus 226 ~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 300 (325)
T cd05280 226 LANLLKQTKYG-GVVASCGNAAGPE-LTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDL---LEIVVREI 300 (325)
T ss_pred HHHHHHhhcCC-CEEEEEecCCCCc-cccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCC---ccceeeEe
Confidence 99999999999 9999999654322 2334444446788888865433211 112333444444552 22356899
Q ss_pred ccccHHHHHHHHhcCCee-EEEEee
Q 025101 233 KFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 233 ~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
+++++++|++.+.+++.. |+++++
T Consensus 301 ~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 301 SLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred cHHHHHHHHHHHhcCCcceEEEEeC
Confidence 999999999999988777 988864
No 98
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.95 E-value=2.5e-26 Score=191.18 Aligned_cols=241 Identities=23% Similarity=0.283 Sum_probs=191.3
Q ss_pred CCCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-C
Q 025101 3 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-G 81 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g 81 (258)
|.++..++ +||+|+++ ..|+|++|+.++.+.++++|++ +.+++.++.++.|||+++.+..++.+|++++|+|+ |
T Consensus 76 G~~v~~~~--~Gd~V~~~-~~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g 150 (329)
T cd08250 76 GEGVTDFK--VGDAVATM-SFGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAG 150 (329)
T ss_pred CCCCCCCC--CCCEEEEe-cCcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCcc
Confidence 34455677 89999965 3589999999999999999997 45677888899999999877788999999999985 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHH
Q 025101 82 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYA 161 (258)
Q Consensus 82 ~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~ 161 (258)
++|++++++++..|+ +|+++++++++.+.++++|++.+++..+ .++.+.+....++++|++||++|+.. +..+++
T Consensus 151 ~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~~~vd~v~~~~g~~~-~~~~~~ 225 (329)
T cd08250 151 GTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINYKT---EDLGEVLKKEYPKGVDVVYESVGGEM-FDTCVD 225 (329)
T ss_pred HHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeCCC---ccHHHHHHHhcCCCCeEEEECCcHHH-HHHHHH
Confidence 999999999999999 8999999999999999999988888776 66777776665448999999999754 899999
Q ss_pred hhhcCCceEEEecccCCCC---------ceeechHHHHhcCceEEecccCCCC--CCCcHHHHHHHHHcCCCCCCccccc
Q 025101 162 CCRKGWGKTIVLGVDQPGS---------QLSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTH 230 (258)
Q Consensus 162 ~l~~~~G~~v~~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~ 230 (258)
+++++ |+++.+|...... ...++ ...+.++.++.++...... ..+.+.++++++.++.++......+
T Consensus 226 ~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 303 (329)
T cd08250 226 NLALK-GRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTR 303 (329)
T ss_pred HhccC-CeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCcc
Confidence 99999 9999998654321 01122 2346678888887533211 1345778888999997766444456
Q ss_pred ccccccHHHHHHHHhcCCee-EEEEe
Q 025101 231 EMKFEEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 231 ~~~~~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
.++++++++|++.+..++.. |++++
T Consensus 304 ~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 304 FRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred ccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 79999999999999887666 88763
No 99
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.95 E-value=2.3e-26 Score=191.81 Aligned_cols=217 Identities=24% Similarity=0.379 Sum_probs=177.8
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIG 101 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~ 101 (258)
.|+|++|+.++...++++|+++++++++.+++++.+||+++... .++++++++|+|+ |++|++++++++..|+ +|++
T Consensus 115 ~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~ 192 (334)
T PRK13771 115 DGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIA 192 (334)
T ss_pred CceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEE
Confidence 58999999999999999999999999999999999999987555 8899999999997 8999999999999999 8999
Q ss_pred EcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCc
Q 025101 102 VDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 181 (258)
Q Consensus 102 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 181 (258)
+++++++.+.++++ ++.+++.+ ++.+.+++. + ++|+++||+|+.. ...+++.++++ |+++.+|.......
T Consensus 193 ~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~v~~~-~-~~d~~ld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~ 262 (334)
T PRK13771 193 VTSSESKAKIVSKY-ADYVIVGS-----KFSEEVKKI-G-GADIVIETVGTPT-LEESLRSLNMG-GKIIQIGNVDPSPT 262 (334)
T ss_pred EeCCHHHHHHHHHH-HHHhcCch-----hHHHHHHhc-C-CCcEEEEcCChHH-HHHHHHHHhcC-CEEEEEeccCCCCC
Confidence 99999999999888 76666553 245555554 3 7999999999876 88999999999 99999996543222
Q ss_pred eeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEee
Q 025101 182 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
++......+.+++++.+... ..++.++++++++.++.++ +.+++.|+++++++|++.+.++... |+++.+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 263 YSLRLGYIILKDIEIIGHIS---ATKRDVEEALKLVAEGKIK--PVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred cccCHHHHHhcccEEEEecC---CCHHHHHHHHHHHHcCCCc--ceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 22333334567888887642 2256788999999999765 3467899999999999999887666 988865
No 100
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.95 E-value=4.5e-26 Score=189.60 Aligned_cols=234 Identities=22% Similarity=0.285 Sum_probs=187.8
Q ss_pred cccCCCCceeeeeccccceeeeEEEec-ceEEEcCCCCC--ccchhh-cchhhhhhhhhhhhhcCCCCCCEEEEEcc-CH
Q 025101 8 RFKDLRGETIHHFVSVSSFSEYTVLDI-AHVVKVDPTVP--PNRACL-LSCGVSTGVGAAWRTANVEVGSTVVIFGL-GS 82 (258)
Q Consensus 8 ~~~~~~G~~v~~~~~~g~~~~~~~v~~-~~~~~~p~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~ 82 (258)
.++ +||+|+++ ++|++|+.++. +.++++|++++ +.+++. +++++.|||+++.....+.+|++|||+|+ |+
T Consensus 83 ~~~--~Gd~V~~~---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ 157 (329)
T cd05288 83 DFK--VGDLVSGF---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGA 157 (329)
T ss_pred CCC--CCCEEecc---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcch
Confidence 466 89999865 47999999999 99999999985 445555 88899999999877788899999999985 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHH
Q 025101 83 IGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYA 161 (258)
Q Consensus 83 ~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~ 161 (258)
+|++++++++..|+ +|+++++++++.+.+++ +|++.++++++ .++.+.+.+.+++++|++|||+|... +..+++
T Consensus 158 ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~v~~~~~~~~d~vi~~~g~~~-~~~~~~ 232 (329)
T cd05288 158 VGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT---PDLAEALKEAAPDGIDVYFDNVGGEI-LDAALT 232 (329)
T ss_pred HHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC---hhHHHHHHHhccCCceEEEEcchHHH-HHHHHH
Confidence 99999999999999 89999999999999988 99999998887 67888888777558999999999865 999999
Q ss_pred hhhcCCceEEEecccCCCCce----eechHHHHhcCceEEecccCCCCC--CCcHHHHHHHHHcCCCCCCcccccccccc
Q 025101 162 CCRKGWGKTIVLGVDQPGSQL----SLSSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKELELDKFVTHEMKFE 235 (258)
Q Consensus 162 ~l~~~~G~~v~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 235 (258)
+++++ |+++.+|........ .++....+.++.++.+........ .+.+.++++++.++.++..+ ...++++
T Consensus 233 ~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~ 309 (329)
T cd05288 233 LLNKG-GRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLE 309 (329)
T ss_pred hcCCC-ceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccHH
Confidence 99999 999999865432211 123444567788888775433211 13467788899999777653 3558999
Q ss_pred cHHHHHHHHhcCCee-EEEE
Q 025101 236 EINSAFDLLIKGKCL-RCVI 254 (258)
Q Consensus 236 ~~~~a~~~~~~~~~~-k~vi 254 (258)
++.++++.+.+++.. |+++
T Consensus 310 ~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 310 NAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHHHHHHHHhcCCCccceeC
Confidence 999999999877665 7663
No 101
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.95 E-value=1.5e-25 Score=185.36 Aligned_cols=240 Identities=18% Similarity=0.268 Sum_probs=195.6
Q ss_pred CCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-CH
Q 025101 4 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GS 82 (258)
Q Consensus 4 ~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~ 82 (258)
.++..++ +||+|+++..+|+|++|+.++...++++|+++++.+++.++.++.++|+++.+...+.++++++|+|+ |+
T Consensus 74 ~~~~~~~--~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ 151 (323)
T cd05276 74 PGVTGWK--VGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASG 151 (323)
T ss_pred CCCCCCC--CCCEEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcCh
Confidence 3445577 89999987666999999999999999999999999999999999999999877788999999999996 89
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHH
Q 025101 83 IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYA 161 (258)
Q Consensus 83 ~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~ 161 (258)
+|++++++++..|+ +|+++++++++.+.++++|++.+++... .++.+.+.+...+ ++|++||++|... +...++
T Consensus 152 ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~ 226 (323)
T cd05276 152 VGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYRT---EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLR 226 (323)
T ss_pred HHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCc---hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHH
Confidence 99999999999999 8999999989999998899888888776 6777888877766 8999999999877 888999
Q ss_pred hhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCC-------CCcHHHHHHHHHcCCCCCCccccccccc
Q 025101 162 CCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-------KSDIPILLKRYMDKELELDKFVTHEMKF 234 (258)
Q Consensus 162 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 234 (258)
+++++ |+++.+|..... ....+...++.+++++.++....... ...+.++++++.++.+.. ..++.|++
T Consensus 227 ~~~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 302 (323)
T cd05276 227 ALAPD-GRLVLIGLLGGA-KAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPL 302 (323)
T ss_pred hhccC-CEEEEEecCCCC-CCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcH
Confidence 99999 999999865332 22344444556788888876443211 122456778888886643 46688999
Q ss_pred ccHHHHHHHHhcCCee-EEEE
Q 025101 235 EEINSAFDLLIKGKCL-RCVI 254 (258)
Q Consensus 235 ~~~~~a~~~~~~~~~~-k~vi 254 (258)
+++++|++.+.++... |+++
T Consensus 303 ~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 303 EEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHHHHHHHhCCCcceEeC
Confidence 9999999999877655 7653
No 102
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.95 E-value=1.1e-25 Score=185.53 Aligned_cols=187 Identities=25% Similarity=0.423 Sum_probs=159.6
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|++|+++++..++++|+++++++++ ++.++.+||+++.....+.+|++|||.|+|++|++++|+++..|+ +|+++
T Consensus 117 ~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~ 194 (306)
T cd08258 117 DGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVV 194 (306)
T ss_pred CCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEE
Confidence 4899999999999999999999999887 666888999998888889999999998889999999999999999 78776
Q ss_pred c--CCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCC
Q 025101 103 D--VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 179 (258)
Q Consensus 103 ~--~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 179 (258)
. +++++.+.++++|++.+ +++. .++.+.+.+..++ ++|+++|++|+...+...+++++++ |+++.+|....
T Consensus 195 ~~~~~~~~~~~~~~~g~~~~-~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~- 268 (306)
T cd08258 195 GTEKDEVRLDVAKELGADAV-NGGE---EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGP- 268 (306)
T ss_pred CCCCCHHHHHHHHHhCCccc-CCCc---CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC-
Confidence 3 34457788899999878 7776 7888888887776 8999999998766689999999999 99999997652
Q ss_pred CceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcC
Q 025101 180 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 220 (258)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 220 (258)
....++...++.+++++.|+..+. +++++++++++++|
T Consensus 269 ~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~~ 306 (306)
T cd08258 269 LAASIDVERIIQKELSVIGSRSST---PASWETALRLLASG 306 (306)
T ss_pred CCcccCHHHHhhcCcEEEEEecCc---hHhHHHHHHHHhcC
Confidence 335566677778999999998655 57899999998875
No 103
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.95 E-value=2.2e-25 Score=186.02 Aligned_cols=241 Identities=16% Similarity=0.123 Sum_probs=189.8
Q ss_pred CCCCccccCCCCceeeeec---cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCC-----CCE
Q 025101 3 RDQTSRFKDLRGETIHHFV---SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV-----GST 74 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~---~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~ 74 (258)
|.++..|+ +||+|+.+. ..|+|++|+.++.+.++++|++++.++++.+++.+.+||+++.+...+.+ |++
T Consensus 75 G~~v~~~~--~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~ 152 (336)
T cd08252 75 GSEVTLFK--VGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKT 152 (336)
T ss_pred CCCCCCCC--CCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCE
Confidence 34455677 999999652 35899999999999999999999999999999999999998877778877 999
Q ss_pred EEEEcc-CHHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCC
Q 025101 75 VVIFGL-GSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 152 (258)
Q Consensus 75 vlI~G~-g~~G~~a~~l~~~~g-~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 152 (258)
|+|+|+ |++|++++++++..| + +|+++++++++.++++++|++.+++.++ ++.+.+....++++|++||++|.
T Consensus 153 vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~i~~~~~~~~d~vl~~~~~ 227 (336)
T cd08252 153 LLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHHQ----DLAEQLEALGIEPVDYIFCLTDT 227 (336)
T ss_pred EEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCCc----cHHHHHHhhCCCCCCEEEEccCc
Confidence 999985 999999999999999 7 9999999999999999999988887653 45566664433389999999997
Q ss_pred hhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCC--CC-------CCcHHHHHHHHHcCCCC
Q 025101 153 ASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL--KA-------KSDIPILLKRYMDKELE 223 (258)
Q Consensus 153 ~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~~~~g~~~ 223 (258)
...+..++++++++ |+++.+|... ..++...+..++.++.+...... .. .+.+.++++++.++.+.
T Consensus 228 ~~~~~~~~~~l~~~-g~~v~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 302 (336)
T cd08252 228 DQHWDAMAELIAPQ-GHICLIVDPQ----EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLK 302 (336)
T ss_pred HHHHHHHHHHhcCC-CEEEEecCCC----CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEe
Confidence 66699999999999 9999998542 22333344456777776543221 00 13467888999999776
Q ss_pred CCcc-cccccccccHHHHHHHHhcCCee-EEEEe
Q 025101 224 LDKF-VTHEMKFEEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 224 ~~~~-~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
.... ..+.++++++++|++.+.++... |++++
T Consensus 303 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 303 TTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred cceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 4321 12468999999999999988766 88763
No 104
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.95 E-value=1.4e-25 Score=184.16 Aligned_cols=240 Identities=20% Similarity=0.292 Sum_probs=189.2
Q ss_pred CCCCccccCCCCceeeeec--cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc
Q 025101 3 RDQTSRFKDLRGETIHHFV--SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL 80 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~--~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~ 80 (258)
|.++.+++ +||+|+++. ..|+|++|++++++.++++|+++++++++.++.++.+||+++ +...+++|++++|+|+
T Consensus 53 G~~v~~~~--~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~ 129 (303)
T cd08251 53 GPHVTRLA--VGDEVIAGTGESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTA 129 (303)
T ss_pred CCCCCCCC--CCCEEEEecCCCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecC
Confidence 44556677 999999764 358999999999999999999999999999999999999987 5788999999999975
Q ss_pred -CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHH
Q 025101 81 -GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQE 158 (258)
Q Consensus 81 -g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~ 158 (258)
|++|++++|+++..|+ +|+++++++++.+.++++|++.+++... .++...+.+.+++ ++|.++|++++.. ...
T Consensus 130 ~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~~~~~~~~-~~~ 204 (303)
T cd08251 130 TGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGRGVDVVINTLSGEA-IQK 204 (303)
T ss_pred CcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCCCceEEEECCcHHH-HHH
Confidence 9999999999999999 8999999999999999999998998877 7788888888877 8999999997655 889
Q ss_pred HHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCC------CCCCcHHHHHHHHHcCCCCCCccccccc
Q 025101 159 AYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL------KAKSDIPILLKRYMDKELELDKFVTHEM 232 (258)
Q Consensus 159 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 232 (258)
.+++++++ |+++.+|.........+.... +.++..+........ ...+.+.++++++.++.++. ..++.|
T Consensus 205 ~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~ 280 (303)
T cd08251 205 GLNCLAPG-GRYVEIAMTALKSAPSVDLSV-LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRP--TVSRIF 280 (303)
T ss_pred HHHHhccC-cEEEEEeccCCCccCccChhH-hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccC--CCceEE
Confidence 99999999 999999865422222222222 222333332211110 01234677888888886553 366889
Q ss_pred ccccHHHHHHHHhcCCee-EEEE
Q 025101 233 KFEEINSAFDLLIKGKCL-RCVI 254 (258)
Q Consensus 233 ~~~~~~~a~~~~~~~~~~-k~vi 254 (258)
+++++.++++.+.+++.. |+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 281 PFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred cHHHHHHHHHHHHhCCCcceEeC
Confidence 999999999999887666 7663
No 105
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.95 E-value=1e-25 Score=183.45 Aligned_cols=239 Identities=18% Similarity=0.267 Sum_probs=189.7
Q ss_pred CCCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-C
Q 025101 3 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-G 81 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g 81 (258)
|.++..|+ +||+|+++ ..|+|++|+.++.+.++++|+++++++++.+++++.++|+++.+...+.+|++|+|+|+ |
T Consensus 39 G~~~~~~~--~Gd~V~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~ 115 (288)
T smart00829 39 GPGVTGLA--VGDRVMGL-APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAG 115 (288)
T ss_pred CCCCcCCC--CCCEEEEE-cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCc
Confidence 44555677 99999976 35899999999999999999999999999999999999998877888999999999985 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC--ceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHH
Q 025101 82 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQE 158 (258)
Q Consensus 82 ~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~ 158 (258)
++|++++++++..|+ +|+++++++++.+.++++|+ +.++++.+ .++.+.+.+..++ ++|.++|++|+.. ...
T Consensus 116 ~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~ 190 (288)
T smart00829 116 GVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNSLAGEF-LDA 190 (288)
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeCCCHHH-HHH
Confidence 999999999999999 89999999999999999998 77888776 6788888887776 8999999999654 889
Q ss_pred HHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCC-----CCCcHHHHHHHHHcCCCCCCcccccccc
Q 025101 159 AYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK-----AKSDIPILLKRYMDKELELDKFVTHEMK 233 (258)
Q Consensus 159 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 233 (258)
.+++++++ |+++.+|..........+... +.++.++.+....... ....+.++++++.++.+... ..+.|+
T Consensus 191 ~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 266 (288)
T smart00829 191 SLRCLAPG-GRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVFP 266 (288)
T ss_pred HHHhccCC-cEEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--CceEEc
Confidence 99999999 999999864321112222222 3446665554321110 12346678888888866543 457899
Q ss_pred cccHHHHHHHHhcCCee-EEE
Q 025101 234 FEEINSAFDLLIKGKCL-RCV 253 (258)
Q Consensus 234 ~~~~~~a~~~~~~~~~~-k~v 253 (258)
+++++++++.+..+... |++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~iv 287 (288)
T smart00829 267 ISDVEDAFRYMQQGKHIGKVV 287 (288)
T ss_pred HHHHHHHHHHHhcCCCcceEe
Confidence 99999999999887655 665
No 106
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.94 E-value=3.7e-25 Score=184.68 Aligned_cols=222 Identities=19% Similarity=0.286 Sum_probs=185.6
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIG 101 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~ 101 (258)
.|+|++|+.++++.++++|+++++++++.++.++.+|++++.+...+.++++++|+|+ +++|++++++++..|+ +|+.
T Consensus 118 ~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~ 196 (342)
T cd08266 118 DGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIA 196 (342)
T ss_pred CcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEE
Confidence 4789999999999999999999999999999999999999878888999999999987 6999999999999999 8999
Q ss_pred EcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCC
Q 025101 102 VDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 180 (258)
Q Consensus 102 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 180 (258)
+++++++.+.+++++.+.+++..+ .++.+.+.+.+.+ ++|.++|+.|... +...+++++++ |+++.+|.....
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~i~~~g~~~-~~~~~~~l~~~-G~~v~~~~~~~~- 270 (342)
T cd08266 197 TAGSEDKLERAKELGADYVIDYRK---EDFVREVRELTGKRGVDVVVEHVGAAT-WEKSLKSLARG-GRLVTCGATTGY- 270 (342)
T ss_pred EeCCHHHHHHHHHcCCCeEEecCC---hHHHHHHHHHhCCCCCcEEEECCcHHH-HHHHHHHhhcC-CEEEEEecCCCC-
Confidence 999999999888888877787766 6777778777766 8999999999866 88999999999 999999865432
Q ss_pred ceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEee
Q 025101 181 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
....+....+.++.++.+..... ...+.++++++.++.+. +.+++.|+++++++|++.+.++... |+++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 271 EAPIDLRHVFWRQLSILGSTMGT---KAELDEALRLVFRGKLK--PVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred CCCcCHHHHhhcceEEEEEecCC---HHHHHHHHHHHHcCCcc--cceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 22334434566788888775332 35688899999999655 3477899999999999999887666 888763
No 107
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.94 E-value=2.4e-25 Score=184.45 Aligned_cols=241 Identities=18% Similarity=0.258 Sum_probs=196.9
Q ss_pred CCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-CH
Q 025101 4 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GS 82 (258)
Q Consensus 4 ~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~ 82 (258)
..+..++ +||+|+++..+|+|++|+.++...++++|+++++.+++.++.++.++|+++.+...+.+|++++|+|+ |+
T Consensus 74 ~~~~~~~--~Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~ 151 (325)
T TIGR02824 74 EGVSRWK--VGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASG 151 (325)
T ss_pred CCCCCCC--CCCEEEEccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcch
Confidence 3445577 89999987556899999999999999999999999999999999999998878889999999999996 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHH
Q 025101 83 IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYA 161 (258)
Q Consensus 83 ~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~ 161 (258)
+|++++++++..|+ +|+++++++++.+.++++|++.+++... .++.+.+....++ ++|+++|++|... +...++
T Consensus 152 ~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~ 226 (325)
T TIGR02824 152 IGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINYRE---EDFVEVVKAETGGKGVDVILDIVGGSY-LNRNIK 226 (325)
T ss_pred HHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCc---hhHHHHHHHHcCCCCeEEEEECCchHH-HHHHHH
Confidence 99999999999999 8999999999888888899888887766 6777888877766 8999999999865 889999
Q ss_pred hhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCC-------CCcHHHHHHHHHcCCCCCCccccccccc
Q 025101 162 CCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-------KSDIPILLKRYMDKELELDKFVTHEMKF 234 (258)
Q Consensus 162 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 234 (258)
+++++ |+++.+|....... .++...++.+++++.+........ ...+.++++++.++.+. +..++.|++
T Consensus 227 ~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~ 302 (325)
T TIGR02824 227 ALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVR--PVIDKVFPL 302 (325)
T ss_pred hhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCccc--CccccEEeH
Confidence 99999 99999986543222 444455557899998876443111 12245677888888654 346688999
Q ss_pred ccHHHHHHHHhcCCee-EEEEe
Q 025101 235 EEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 235 ~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
+++.++++.+.++... |++++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~v~~ 324 (325)
T TIGR02824 303 EDAAQAHALMESGDHIGKIVLT 324 (325)
T ss_pred HHHHHHHHHHHhCCCcceEEEe
Confidence 9999999998877666 88875
No 108
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.94 E-value=4.1e-25 Score=183.03 Aligned_cols=242 Identities=20% Similarity=0.289 Sum_probs=194.9
Q ss_pred CCCCccccCCCCceeeeec-----cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEE
Q 025101 3 RDQTSRFKDLRGETIHHFV-----SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVI 77 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~-----~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI 77 (258)
|+++..|+ +||+|+++. ..|++++|+.++.+.++++|+++++++++.+++++.+||+++....++.+|++++|
T Consensus 73 g~~~~~~~--~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI 150 (325)
T cd08253 73 GEGVDGLK--VGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLV 150 (325)
T ss_pred CCCCCCCC--CCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEE
Confidence 44555677 999999764 26899999999999999999999999999999999999999877788999999999
Q ss_pred Ecc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhh
Q 025101 78 FGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASL 155 (258)
Q Consensus 78 ~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~ 155 (258)
+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+++... .++.+.+.+...+ ++|+++|++|...
T Consensus 151 ~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~- 225 (325)
T cd08253 151 HGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRA---EDLADRILAATAGQGVDVIIEVLANVN- 225 (325)
T ss_pred EcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC---cCHHHHHHHHcCCCceEEEEECCchHH-
Confidence 986 9999999999999999 8999999999999999999988888776 6788888887766 8999999999876
Q ss_pred HHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCC---CCCcHHHHHHHHHcCCCCCCccccccc
Q 025101 156 VQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK---AKSDIPILLKRYMDKELELDKFVTHEM 232 (258)
Q Consensus 156 ~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~ 232 (258)
....+++++++ |+++.+|.... ....+...++.++.++.+....... ..+.+..+.+++..+.++. ..+++|
T Consensus 226 ~~~~~~~l~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~ 300 (325)
T cd08253 226 LAKDLDVLAPG-GRIVVYGSGGL--RGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRP--VIAREY 300 (325)
T ss_pred HHHHHHhhCCC-CEEEEEeecCC--cCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccC--ccccEE
Confidence 88889999999 99999986542 2233334445667777665432211 0123455666777776543 366889
Q ss_pred ccccHHHHHHHHhcCCee-EEEEee
Q 025101 233 KFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 233 ~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
+++++.++++.+.++... |+++++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 301 PLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred cHHHHHHHHHHHHcCCCcceEEEeC
Confidence 999999999999887766 888753
No 109
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.94 E-value=2.4e-25 Score=185.42 Aligned_cols=215 Identities=24% Similarity=0.389 Sum_probs=176.0
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
.|+|++|+.+++..++++|+++++++++.+++.+.+||+++.. .++.++++|+|+|+|++|++++++++..|. +|+++
T Consensus 115 ~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~ 192 (330)
T cd08245 115 QGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAI 192 (330)
T ss_pred CCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEE
Confidence 5899999999999999999999999999999999999998754 788999999999988899999999999999 89999
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCce
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 182 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 182 (258)
++++++.++++++|++.+++..+ .+.... ..+++|++||+++.......++++++++ |+++.+|..... ..
T Consensus 193 ~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~-~~ 263 (330)
T cd08245 193 TRSPDKRELARKLGADEVVDSGA---ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESP-PF 263 (330)
T ss_pred eCCHHHHHHHHHhCCcEEeccCC---cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCC-cc
Confidence 99999999999999888887665 333322 2237999999988777689999999999 999999864322 22
Q ss_pred eechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEE
Q 025101 183 SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 254 (258)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi 254 (258)
.+....++.++.++.++..+. ...++++++++.++.+.. ..+.|+++++++|++.+.++... |+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 264 SPDIFPLIMKRQSIAGSTHGG---RADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred ccchHHHHhCCCEEEEeccCC---HHHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 223444667788888876433 356888899999997653 34789999999999999887766 7664
No 110
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.94 E-value=4.3e-25 Score=179.44 Aligned_cols=229 Identities=26% Similarity=0.426 Sum_probs=178.7
Q ss_pred CCCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCH
Q 025101 3 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS 82 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~ 82 (258)
|+++..++ .||+|+.+ +.|++|++++.+.++++|+++++++++.+ +++.+||+++ ...++.+|++++|+|+|+
T Consensus 36 G~~v~~~~--~Gd~V~~~---~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~ 108 (277)
T cd08255 36 GSGVTGFK--PGDRVFCF---GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGL 108 (277)
T ss_pred CCCCCCCC--CCCEEEec---CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCH
Confidence 44455677 89999975 36999999999999999999999999888 6899999986 578899999999999899
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcC-CceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHH
Q 025101 83 IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAY 160 (258)
Q Consensus 83 ~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g-~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~ 160 (258)
+|++++++++..|.++|+++++++++.++++++| ++.+++..+ ....+ ++|++||+++....+...+
T Consensus 109 vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~ 177 (277)
T cd08255 109 VGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETAL 177 (277)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHH
Confidence 9999999999999933999999999999999999 555554322 11233 8999999998766689999
Q ss_pred HhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCC---------CCCCcHHHHHHHHHcCCCCCCcccccc
Q 025101 161 ACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL---------KAKSDIPILLKRYMDKELELDKFVTHE 231 (258)
Q Consensus 161 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~ 231 (258)
++++++ |+++.+|..... . ......+..+..++.+...... ...+.++++++++.++.++ +.+.+.
T Consensus 178 ~~l~~~-g~~~~~g~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--~~~~~~ 252 (277)
T cd08255 178 RLLRDR-GRVVLVGWYGLK-P-LLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLE--ALITHR 252 (277)
T ss_pred HHhcCC-cEEEEEeccCCC-c-cccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcc--ccccCc
Confidence 999999 999999865432 1 1122234445667766653321 1125688999999999654 346688
Q ss_pred cccccHHHHHHHHhcC--CeeEEEE
Q 025101 232 MKFEEINSAFDLLIKG--KCLRCVI 254 (258)
Q Consensus 232 ~~~~~~~~a~~~~~~~--~~~k~vi 254 (258)
|+++++++|++.+.++ ..+|+++
T Consensus 253 ~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 253 VPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred cCHHHHHHHHHHHHcCCccceeeeC
Confidence 9999999999999877 4448764
No 111
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.94 E-value=6.7e-25 Score=182.67 Aligned_cols=216 Identities=29% Similarity=0.437 Sum_probs=175.1
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIG 101 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~ 101 (258)
.|+|++|++++...++++|+++++++++.+++++.+||+++.. ..+.+++++||+|+ |++|++++++++..|. +|++
T Consensus 115 ~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~ 192 (332)
T cd08259 115 DGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIA 192 (332)
T ss_pred CCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEE
Confidence 5899999999999999999999999999999999999999765 88899999999987 9999999999999999 8999
Q ss_pred EcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCc
Q 025101 102 VDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 181 (258)
Q Consensus 102 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 181 (258)
+++++++.+.++++|.+.+++.. ++.+.+.+.. ++|+++|++|... ...++++++++ |+++.+|......
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~~- 262 (332)
T cd08259 193 VTRSPEKLKILKELGADYVIDGS-----KFSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPDP- 262 (332)
T ss_pred EeCCHHHHHHHHHcCCcEEEecH-----HHHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCCC-
Confidence 99999999999889987777543 2555555443 7999999999877 88999999999 9999998654321
Q ss_pred eeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEe
Q 025101 182 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
...+......++..+.++... ....+.++++++.++.++ +.+++.|+++++.+||+.+.+++.. |++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 263 APLRPGLLILKEIRIIGSISA---TKADVEEALKLVKEGKIK--PVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred cCCCHHHHHhCCcEEEEecCC---CHHHHHHHHHHHHcCCCc--cceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 112223333467777766422 245688899999999665 3467899999999999999988766 88764
No 112
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.94 E-value=8.6e-25 Score=181.96 Aligned_cols=209 Identities=20% Similarity=0.243 Sum_probs=171.1
Q ss_pred ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE
Q 025101 23 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 102 (258)
Q Consensus 23 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~ 102 (258)
+|+|++|+.++.+.++++|+++++.+++.+++++.|||+++ +.++++++++++|+|+|++|++++++++..|+ +|+++
T Consensus 120 ~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~ 197 (329)
T cd08298 120 DGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAF 197 (329)
T ss_pred CCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEE
Confidence 58999999999999999999999999999999999999997 88999999999999999999999999999999 89999
Q ss_pred cCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCce
Q 025101 103 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 182 (258)
Q Consensus 103 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 182 (258)
++++++.+.++++|++.+++.++ . .+.++|.++++.+....++.++++++++ |+++.+|.... ...
T Consensus 198 ~~~~~~~~~~~~~g~~~~~~~~~---~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~ 263 (329)
T cd08298 198 TRSGEHQELARELGADWAGDSDD---L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIP 263 (329)
T ss_pred cCChHHHHHHHHhCCcEEeccCc---c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCC
Confidence 99999999999999988877654 1 1227999999877666799999999999 99998885322 111
Q ss_pred eechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEE
Q 025101 183 SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 254 (258)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi 254 (258)
.++... +.++..+.++... ....+.++++++.++.++. . ++.|+++++++|++.+++++.. |+++
T Consensus 264 ~~~~~~-~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 264 AFDYEL-LWGEKTIRSVANL---TRQDGEEFLKLAAEIPIKP--E-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred ccchhh-hhCceEEEEecCC---CHHHHHHHHHHHHcCCCCc--e-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 222222 3456667666422 1356888999999997654 2 4889999999999999987766 7663
No 113
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=9.8e-25 Score=181.00 Aligned_cols=237 Identities=19% Similarity=0.244 Sum_probs=191.3
Q ss_pred CCCCccccCCCCceeeeec-----cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEE
Q 025101 3 RDQTSRFKDLRGETIHHFV-----SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVI 77 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~-----~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI 77 (258)
|.++..|+ .||+|+++. ..|+|++|+.++.+.++++|+++++.+++.++..+.+||+++.+..++.+|++++|
T Consensus 73 G~~~~~~~--~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli 150 (326)
T cd08272 73 GEGVTRFR--VGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLI 150 (326)
T ss_pred CCCCCCCC--CCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 34555677 999999764 25899999999999999999999999999999999999998878889999999999
Q ss_pred Ecc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhh
Q 025101 78 FGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASL 155 (258)
Q Consensus 78 ~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~ 155 (258)
+|+ |++|++++++++..|+ +|++++++ ++.++++++|++.+++... . +.+.+.+.+++ ++|.++|++++..
T Consensus 151 ~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~-~~~~~~~~~~~~~~d~v~~~~~~~~- 223 (326)
T cd08272 151 HGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYRE---T-VVEYVAEHTGGRGFDVVFDTVGGET- 223 (326)
T ss_pred EcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecch---h-HHHHHHHhcCCCCCcEEEECCChHH-
Confidence 985 9999999999999999 89998888 8889999999988888766 5 77888888877 8999999999865
Q ss_pred HHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCC--C------CCCCcHHHHHHHHHcCCCCCCcc
Q 025101 156 VQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG--L------KAKSDIPILLKRYMDKELELDKF 227 (258)
Q Consensus 156 ~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~g~~~~~~~ 227 (258)
....+++++++ |+++.+|... .. +......+++++.+..... . .....+.++++++.++.+.. .
T Consensus 224 ~~~~~~~l~~~-g~~v~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~ 295 (326)
T cd08272 224 LDASFEAVALY-GRVVSILGGA---TH--DLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRP--L 295 (326)
T ss_pred HHHHHHHhccC-CEEEEEecCC---cc--chhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccc--c
Confidence 88899999999 9999998552 11 1222235677777664221 1 01235677888888886543 3
Q ss_pred cc-cccccccHHHHHHHHhcCCee-EEEEee
Q 025101 228 VT-HEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 228 ~~-~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
++ +.|++++++++++.+.++... |+++++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 296 LDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred cccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 44 889999999999999877666 888763
No 114
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.94 E-value=1.4e-24 Score=180.24 Aligned_cols=237 Identities=16% Similarity=0.201 Sum_probs=183.1
Q ss_pred CccccCCCCceeeeec------cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhh--hhcCCC-CCCEEE
Q 025101 6 TSRFKDLRGETIHHFV------SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW--RTANVE-VGSTVV 76 (258)
Q Consensus 6 ~~~~~~~~G~~v~~~~------~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~--~~~~~~-~g~~vl 76 (258)
+..++ +||+|+.+. ..|+|++|++++.+.++++|+++++++++.++.++++|+.++. +..... +|++++
T Consensus 74 ~~~~~--~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vl 151 (324)
T cd08288 74 SPRFK--PGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVL 151 (324)
T ss_pred CCCCC--CCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEE
Confidence 34566 899999652 2689999999999999999999999999999999999987653 123444 578999
Q ss_pred EEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhh
Q 025101 77 IFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASL 155 (258)
Q Consensus 77 I~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~ 155 (258)
|+|+ |++|++++|+|+.+|+ +|++++.++++.+.++++|++.++++++ ....++.+.++++|.+||+++...
T Consensus 152 I~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~d~~~~~~- 224 (324)
T cd08288 152 VTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAE-----LSEPGRPLQKERWAGAVDTVGGHT- 224 (324)
T ss_pred EECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcch-----hhHhhhhhccCcccEEEECCcHHH-
Confidence 9997 9999999999999999 8999999999999999999999998765 222455555557899999999754
Q ss_pred HHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCC---CCCcHHHHHHHHHcCCCCCCccccccc
Q 025101 156 VQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK---AKSDIPILLKRYMDKELELDKFVTHEM 232 (258)
Q Consensus 156 ~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~ 232 (258)
+...+..++.+ |+++.+|.... ...+++...++.++.++.+....... ..+.+..+.+++.++.+.. +.+.+
T Consensus 225 ~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~ 299 (324)
T cd08288 225 LANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA---LTREI 299 (324)
T ss_pred HHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc---cceee
Confidence 77888889998 99999997532 22233334444678998886432211 1224556667777775542 35899
Q ss_pred ccccHHHHHHHHhcCCee-EEEEee
Q 025101 233 KFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 233 ~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
+++++.+|++.+.+++.. |+++++
T Consensus 300 ~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 300 PLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred cHHHHHHHHHHHhcCCccCeEEEeC
Confidence 999999999999988877 888763
No 115
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=1.7e-24 Score=179.63 Aligned_cols=242 Identities=21% Similarity=0.297 Sum_probs=193.6
Q ss_pred CCCCccccCCCCceeeeec-----cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEE
Q 025101 3 RDQTSRFKDLRGETIHHFV-----SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVI 77 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~-----~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI 77 (258)
|+++.+|+ +||+|+++. ..|++++|+.++.+.++++|+++++++++.+++++.+||+++.....+.++++++|
T Consensus 73 G~~~~~~~--~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli 150 (328)
T cd08268 73 GAGVTGFA--VGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLI 150 (328)
T ss_pred CCCCCcCC--CCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEE
Confidence 45566777 999999763 24899999999999999999999999999999999999999877888999999999
Q ss_pred Ecc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhh
Q 025101 78 FGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASL 155 (258)
Q Consensus 78 ~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~ 155 (258)
+|+ |++|++++++++..|+ +++.+++++++.+.++++|++.+++.+. .++.+.+.+...+ ++|+++++.|+..
T Consensus 151 ~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~- 225 (328)
T cd08268 151 TAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDE---EDLVAEVLRITGGKGVDVVFDPVGGPQ- 225 (328)
T ss_pred ecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecCC---ccHHHHHHHHhCCCCceEEEECCchHh-
Confidence 987 9999999999999999 8999999999999998899888888776 6777778777766 8999999999865
Q ss_pred HHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCC-CCC----cHHHHHHHHHcCCCCCCccccc
Q 025101 156 VQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK-AKS----DIPILLKRYMDKELELDKFVTH 230 (258)
Q Consensus 156 ~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~g~~~~~~~~~~ 230 (258)
...++++++++ |+++.+|.... ....++....+.++.++.+....... ... .+..+.+++.++.+.. ..+.
T Consensus 226 ~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 301 (328)
T cd08268 226 FAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKP--VVDR 301 (328)
T ss_pred HHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcC--Cccc
Confidence 88999999999 99999986543 22233333346778888776533211 011 2344555566675543 3568
Q ss_pred ccccccHHHHHHHHhcCCee-EEEEe
Q 025101 231 EMKFEEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 231 ~~~~~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
.|++++++++++.+..+... |++++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 302 VFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred EEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 89999999999999887666 88875
No 116
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.94 E-value=1e-24 Score=181.17 Aligned_cols=207 Identities=25% Similarity=0.343 Sum_probs=167.6
Q ss_pred cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEE
Q 025101 22 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRII 100 (258)
Q Consensus 22 ~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~ 100 (258)
..|+|++|+.+++..++++|+++++++++.+++++.+||+++. ..++++|++++|+|+ |++|++++++|+..|+ +|+
T Consensus 114 ~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~ 191 (325)
T cd08264 114 SNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVI 191 (325)
T ss_pred CCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEE
Confidence 3589999999999999999999999999999999999999874 488999999999997 9999999999999999 788
Q ss_pred EEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCC
Q 025101 101 GVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 180 (258)
Q Consensus 101 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 180 (258)
++++ .+.++++|++++++.++ ..+.+++++ +++|+|+|++|... +...+++++++ |+++.+|... ..
T Consensus 192 ~~~~----~~~~~~~g~~~~~~~~~-----~~~~l~~~~-~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~-~~ 258 (325)
T cd08264 192 AVSR----KDWLKEFGADEVVDYDE-----VEEKVKEIT-KMADVVINSLGSSF-WDLSLSVLGRG-GRLVTFGTLT-GG 258 (325)
T ss_pred EEeH----HHHHHHhCCCeeecchH-----HHHHHHHHh-CCCCEEEECCCHHH-HHHHHHhhccC-CEEEEEecCC-CC
Confidence 8763 36778899988887654 345566666 57999999999864 99999999999 9999998642 22
Q ss_pred ceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee
Q 025101 181 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL 250 (258)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 250 (258)
...++...+..++.++.+...+. ++.++++++++... +. .+.+.|+++++++|++.+..+...
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~--~~--~~~~~~~~~~~~~a~~~~~~~~~~ 321 (325)
T cd08264 259 EVKLDLSDLYSKQISIIGSTGGT---RKELLELVKIAKDL--KV--KVWKTFKLEEAKEALKELFSKERD 321 (325)
T ss_pred CCccCHHHHhhcCcEEEEccCCC---HHHHHHHHHHHHcC--Cc--eeEEEEcHHHHHHHHHHHHcCCCc
Confidence 34455556666788888775332 45788899888543 32 355889999999999998876554
No 117
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.94 E-value=1.6e-24 Score=176.70 Aligned_cols=240 Identities=20% Similarity=0.235 Sum_probs=190.2
Q ss_pred CCCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-C
Q 025101 3 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-G 81 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g 81 (258)
|.++.+++ +||+|+++. .|+|+||+.++.+.++++|+++++.+++.+++++.+||.++.+...+++|++++|+|+ |
T Consensus 43 g~~~~~~~--~Gd~V~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g 119 (293)
T cd05195 43 GSGVTGLK--VGDRVMGLA-PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAG 119 (293)
T ss_pred cCCccCCC--CCCEEEEEe-cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCC
Confidence 34555677 999999753 5899999999999999999999999999999999999999877788999999999975 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcC--CceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHH
Q 025101 82 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQE 158 (258)
Q Consensus 82 ~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g--~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~ 158 (258)
++|++++++++..|+ +|+++++++++.+.+++.| ++.+++..+ .++.+.+.+.+.+ ++|.++|++|+.. ++.
T Consensus 120 ~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~ 194 (293)
T cd05195 120 GVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDVVLNSLSGEL-LRA 194 (293)
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceEEEeCCCchH-HHH
Confidence 999999999999999 8999998989999998888 677888776 6788888888776 8999999999884 999
Q ss_pred HHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCC------CCCcHHHHHHHHHcCCCCCCccccccc
Q 025101 159 AYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK------AKSDIPILLKRYMDKELELDKFVTHEM 232 (258)
Q Consensus 159 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~ 232 (258)
++++++++ |+++.+|.........+... .+.++.++......... ..+.+.++++++.++.++ +..+..+
T Consensus 195 ~~~~l~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 270 (293)
T cd05195 195 SWRCLAPF-GRFVEIGKRDILSNSKLGMR-PFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK--PLPPTVV 270 (293)
T ss_pred HHHhcccC-ceEEEeeccccccCCccchh-hhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc--cCCCeee
Confidence 99999999 99999986543211112222 23345555543321110 023467788888888654 4566789
Q ss_pred ccccHHHHHHHHhcCCee-EEEE
Q 025101 233 KFEEINSAFDLLIKGKCL-RCVI 254 (258)
Q Consensus 233 ~~~~~~~a~~~~~~~~~~-k~vi 254 (258)
+++++.++++.+..+... |+++
T Consensus 271 ~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 271 PSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred chhhHHHHHHHHhcCCCCceecC
Confidence 999999999999887665 7653
No 118
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.93 E-value=4e-24 Score=176.93 Aligned_cols=239 Identities=21% Similarity=0.365 Sum_probs=194.4
Q ss_pred CCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-CHH
Q 025101 5 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSI 83 (258)
Q Consensus 5 ~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~ 83 (258)
++..++ .||+|+++...|++++|+.++.+.++++|+++++.+++.++.++.+|++++.....+.+|++++|+|+ |++
T Consensus 75 ~~~~~~--~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~ 152 (323)
T cd08241 75 GVTGFK--VGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGV 152 (323)
T ss_pred CCCCCC--CCCEEEEecCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Confidence 344566 89999987546899999999999999999999999998888899999998776788999999999997 999
Q ss_pred HHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHh
Q 025101 84 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYAC 162 (258)
Q Consensus 84 G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~ 162 (258)
|++++++++..|+ +|+++++++++.+.++++|++.+++... .++.+.+.+.+++ ++|.++|++|... +..++++
T Consensus 153 g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~~~~g~~~-~~~~~~~ 227 (323)
T cd08241 153 GLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDYRD---PDLRERVKALTGGRGVDVVYDPVGGDV-FEASLRS 227 (323)
T ss_pred HHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeecCC---ccHHHHHHHHcCCCCcEEEEECccHHH-HHHHHHh
Confidence 9999999999999 8999999999999999999888888776 6788888888776 8999999999855 8899999
Q ss_pred hhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCC------CCcHHHHHHHHHcCCCCCCccccccccccc
Q 025101 163 CRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA------KSDIPILLKRYMDKELELDKFVTHEMKFEE 236 (258)
Q Consensus 163 l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 236 (258)
++++ |+++.+|....... .+.....+.++.++.+........ ...+.++++++.++.+. +..++.|++++
T Consensus 228 ~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 303 (323)
T cd08241 228 LAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIR--PHVSAVFPLEQ 303 (323)
T ss_pred hccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcc--cccceEEcHHH
Confidence 9999 99999986432111 122333456788888875443211 13467788888888654 34678899999
Q ss_pred HHHHHHHHhcCCee-EEEE
Q 025101 237 INSAFDLLIKGKCL-RCVI 254 (258)
Q Consensus 237 ~~~a~~~~~~~~~~-k~vi 254 (258)
+.++++.+..+... |+++
T Consensus 304 ~~~~~~~~~~~~~~~~vvv 322 (323)
T cd08241 304 AAEALRALADRKATGKVVL 322 (323)
T ss_pred HHHHHHHHHhCCCCCcEEe
Confidence 99999998877655 7775
No 119
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.93 E-value=3.3e-24 Score=180.09 Aligned_cols=244 Identities=16% Similarity=0.202 Sum_probs=177.0
Q ss_pred CCCCc-cccCCCCceeeeec-----cccceeeeEEEecc----eEEEcCCCCCccchhhcchhhhhhhhhhhhhc-CCCC
Q 025101 3 RDQTS-RFKDLRGETIHHFV-----SVSSFSEYTVLDIA----HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA-NVEV 71 (258)
Q Consensus 3 ~~~~~-~~~~~~G~~v~~~~-----~~g~~~~~~~v~~~----~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~ 71 (258)
|.++. +|+ +||+|+++. +.|+|++|+++++. .++++|+++++++++.++.++.|||+++.... .+++
T Consensus 74 G~~v~~~~~--~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~ 151 (352)
T cd08247 74 GSNVASEWK--VGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGP 151 (352)
T ss_pred CcccccCCC--CCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCC
Confidence 44555 677 999999764 25899999999987 78999999999999999999999999986666 7999
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHhcCCceEEcCCCCCCcc---HHHHHHHh-cCC-CCC
Q 025101 72 GSTVVIFGL-GSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKS---VSQIIIDM-TDG-GAD 144 (258)
Q Consensus 72 g~~vlI~G~-g~~G~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~---~~~~i~~~-~~~-~~d 144 (258)
|++++|+|+ |++|++++++|+.+|. ++++++. ++++.+.++++|++.+++.++ .+ +...+.+. +++ ++|
T Consensus 152 g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d 227 (352)
T cd08247 152 DSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDA---HSGVKLLKPVLENVKGQGKFD 227 (352)
T ss_pred CCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCC---CcccchHHHHHHhhcCCCCce
Confidence 999999987 7999999999998754 3566665 556666888899988998776 34 44444444 424 899
Q ss_pred EEEEecCChhhHHHHHHhhh---cCCceEEEecccCCCCceee---c-------hHHHHhcCceEEecccC---CCCCCC
Q 025101 145 YCFECVGLASLVQEAYACCR---KGWGKTIVLGVDQPGSQLSL---S-------SFEVLHSGKILMGSLFG---GLKAKS 208 (258)
Q Consensus 145 ~v~d~~g~~~~~~~~~~~l~---~~~G~~v~~g~~~~~~~~~~---~-------~~~~~~~~~~~~~~~~~---~~~~~~ 208 (258)
++|||+|....+..++++++ ++ |+++.++.... ..+.. + ....+.+..++...... .....+
T Consensus 228 ~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (352)
T cd08247 228 LILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYK-ANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNAD 305 (352)
T ss_pred EEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCc-ccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHH
Confidence 99999998665889999999 99 99998752211 11100 0 00011112211111100 000024
Q ss_pred cHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEEee
Q 025101 209 DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 209 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
.+.++++++.++.++ +.++++++++++++|++.+++++.. |+++++
T Consensus 306 ~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 306 WIEKCAELIADGKVK--PPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred HHHHHHHHHhCCCeE--eeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 577888999999654 3466899999999999999887766 888753
No 120
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.93 E-value=1.9e-24 Score=179.99 Aligned_cols=238 Identities=25% Similarity=0.320 Sum_probs=180.8
Q ss_pred CCCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-C
Q 025101 3 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-G 81 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g 81 (258)
|.++.+|+ +||+|+++...|+|++|+.++.+.++++|+++++++++.+++++.+||+++.+...+.+|++++|+|+ |
T Consensus 73 G~~v~~~~--~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g 150 (331)
T cd08273 73 GSGVTGFE--VGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASG 150 (331)
T ss_pred CCCCccCC--CCCEEEEeCCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCc
Confidence 44566777 99999987556899999999999999999999999999999999999999877788999999999996 9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHH
Q 025101 82 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYA 161 (258)
Q Consensus 82 ~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~ 161 (258)
++|++++++++..|+ +|++++. +++.+.++++|+.. ++... .++... +..++++|.++|++|+.. +..+++
T Consensus 151 ~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~~---~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~ 221 (331)
T cd08273 151 GVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYRT---KDWLPA--MLTPGGVDVVFDGVGGES-YEESYA 221 (331)
T ss_pred HHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCCC---cchhhh--hccCCCceEEEECCchHH-HHHHHH
Confidence 999999999999999 8999887 88889999999753 45544 344433 233348999999999887 899999
Q ss_pred hhhcCCceEEEecccCCCCce--eechH------------HHHhcCceEEecccCC----CCCCCcHHHHHHHHHcCCCC
Q 025101 162 CCRKGWGKTIVLGVDQPGSQL--SLSSF------------EVLHSGKILMGSLFGG----LKAKSDIPILLKRYMDKELE 223 (258)
Q Consensus 162 ~l~~~~G~~v~~g~~~~~~~~--~~~~~------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~ 223 (258)
+++++ |+++.+|........ .+++. ....+..++....... ....+.+.++++++.++.++
T Consensus 222 ~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~ 300 (331)
T cd08273 222 ALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIR 300 (331)
T ss_pred HhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCcc
Confidence 99999 999999865432221 11110 0112223332222100 00124577888999999665
Q ss_pred CCcccccccccccHHHHHHHHhcCCee-EEEE
Q 025101 224 LDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 254 (258)
Q Consensus 224 ~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi 254 (258)
+.+.++++++++++|++.+.++... |+|+
T Consensus 301 --~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 301 --PKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred --CCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 3466889999999999998877666 7764
No 121
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.93 E-value=3.1e-24 Score=178.04 Aligned_cols=238 Identities=21% Similarity=0.303 Sum_probs=185.9
Q ss_pred CCCCccccCCCCceeeeec---cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEc
Q 025101 3 RDQTSRFKDLRGETIHHFV---SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG 79 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~---~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G 79 (258)
|+++.+++ +||+|+++. ..|+|++|+.++.+.++++|+++++.+++.+++++.+|++++.+...+.+|++++|+|
T Consensus 72 G~~~~~~~--~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g 149 (325)
T cd08271 72 GAKVTGWK--VGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITG 149 (325)
T ss_pred CCCCCcCC--CCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEC
Confidence 34455677 999999764 3689999999999999999999999999999999999999987788899999999999
Q ss_pred c-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHH
Q 025101 80 L-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQ 157 (258)
Q Consensus 80 ~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~ 157 (258)
+ |++|++++++++..|+ +|+++. ++++.+.++++|++.+++... .++...+.+..++ ++|.++|++++.. ..
T Consensus 150 ~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~ 223 (325)
T cd08271 150 GAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYND---EDVCERIKEITGGRGVDAVLDTVGGET-AA 223 (325)
T ss_pred CccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCCC---ccHHHHHHHHcCCCCCcEEEECCCcHh-HH
Confidence 7 7999999999999999 788876 677888888899988888776 6777888887776 8999999999876 67
Q ss_pred HHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEeccc-----CCC-----CCCCcHHHHHHHHHcCCCCCCcc
Q 025101 158 EAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF-----GGL-----KAKSDIPILLKRYMDKELELDKF 227 (258)
Q Consensus 158 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~~g~~~~~~~ 227 (258)
..+++++++ |+++.++..... . . . ..+.++..+..... ... ..++.+.++++++.++.++. .
T Consensus 224 ~~~~~l~~~-G~~v~~~~~~~~-~-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~ 295 (325)
T cd08271 224 ALAPTLAFN-GHLVCIQGRPDA-S-P--D-PPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEP--L 295 (325)
T ss_pred HHHHhhccC-CEEEEEcCCCCC-c-c--h-hHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeee--c
Confidence 789999999 999988744221 1 1 1 11222333332211 110 11234567888888886653 3
Q ss_pred cccccccccHHHHHHHHhcCCee-EEEEee
Q 025101 228 VTHEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 228 ~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
.++.|+++++.+|++.+.++... |+++++
T Consensus 296 ~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 296 VIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred cceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 55889999999999999887666 888763
No 122
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.93 E-value=3.7e-24 Score=179.64 Aligned_cols=238 Identities=20% Similarity=0.258 Sum_probs=179.3
Q ss_pred CCCCccccCCCCceeeeec---cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCC----CCEE
Q 025101 3 RDQTSRFKDLRGETIHHFV---SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV----GSTV 75 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~---~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~----g~~v 75 (258)
|.++..++ +||+|+++. ..|+|++|+.++++.++++|+++++++++.+++++.|||+++.....+.+ |+++
T Consensus 89 G~~v~~~~--~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~v 166 (350)
T cd08248 89 GSGVKSFE--IGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRV 166 (350)
T ss_pred CCCcccCC--CCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEE
Confidence 34555677 899999754 36899999999999999999999999999999999999999877777654 9999
Q ss_pred EEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChh
Q 025101 76 VIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS 154 (258)
Q Consensus 76 lI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~ 154 (258)
+|+|+ |++|++++++++..|+ +|+++.++ ++.+.++++|++.+++..+ .++.+.+... +++|++||++|...
T Consensus 167 lI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~--~~vd~vi~~~g~~~ 239 (350)
T cd08248 167 LILGGSGGVGTFAIQLLKAWGA-HVTTTCST-DAIPLVKSLGADDVIDYNN---EDFEEELTER--GKFDVILDTVGGDT 239 (350)
T ss_pred EEECCCChHHHHHHHHHHHCCC-eEEEEeCc-chHHHHHHhCCceEEECCC---hhHHHHHHhc--CCCCEEEECCChHH
Confidence 99985 9999999999999999 78887754 6778889999988888766 5565555432 37999999999884
Q ss_pred hHHHHHHhhhcCCceEEEecccCCCCc--eee--c----hHHHHhcC-------ceEEecccCCCCCCCcHHHHHHHHHc
Q 025101 155 LVQEAYACCRKGWGKTIVLGVDQPGSQ--LSL--S----SFEVLHSG-------KILMGSLFGGLKAKSDIPILLKRYMD 219 (258)
Q Consensus 155 ~~~~~~~~l~~~~G~~v~~g~~~~~~~--~~~--~----~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (258)
+..++++++++ |+++.+|....... ... . ...+.... ..+.... .......+.++++++.+
T Consensus 240 -~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 315 (350)
T cd08248 240 -EKWALKLLKKG-GTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF--FSPSGSALDELAKLVED 315 (350)
T ss_pred -HHHHHHHhccC-CEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEE--ECCCHHHHHHHHHHHhC
Confidence 99999999999 99999985432111 111 0 00111111 1010000 01123568889999999
Q ss_pred CCCCCCcccccccccccHHHHHHHHhcCCee-EEEEe
Q 025101 220 KELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 255 (258)
Q Consensus 220 g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 255 (258)
+.+.. .+++.|+++++.+|++.+.+++.. |++++
T Consensus 316 g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 316 GKIKP--VIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred CCEec--ccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 96643 467899999999999999887665 77763
No 123
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.93 E-value=7.7e-24 Score=171.15 Aligned_cols=202 Identities=27% Similarity=0.403 Sum_probs=165.5
Q ss_pred CCCCccccCCCCceeeeec-----------------------cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhh
Q 025101 3 RDQTSRFKDLRGETIHHFV-----------------------SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 59 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~-----------------------~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta 59 (258)
|.++..|+ +||+|+++. ..|+|++|+.++.+.++++|+++++++++.++.++.+|
T Consensus 45 G~~v~~~~--~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a 122 (271)
T cd05188 45 GPGVTGVK--VGDRVVVLPNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATA 122 (271)
T ss_pred CCCCCcCC--CCCEEEEcCCCCCCCCHHHHhhCCCCCEeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHH
Confidence 34456677 999999654 25899999999999999999999999999999999999
Q ss_pred hhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhc
Q 025101 60 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT 139 (258)
Q Consensus 60 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~ 139 (258)
|+++.....+.+|++|||+|+|++|++++++++..|. +|+++++++++.+.++++|++.+++..+ .+..+.+. ..
T Consensus 123 ~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~ 197 (271)
T cd05188 123 YHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LT 197 (271)
T ss_pred HHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-Hh
Confidence 9998777777899999999986699999999999998 9999999999999999999888888776 66666666 44
Q ss_pred CC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHH
Q 025101 140 DG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKR 216 (258)
Q Consensus 140 ~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (258)
.+ ++|++||+++.......++++++++ |+++.+|........ ......+.+++++.++..+. ..++++++++
T Consensus 198 ~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 270 (271)
T cd05188 198 GGGGADVVIDAVGGPETLAQALRLLRPG-GRIVVVGGTSGGPPL-DDLRRLLFKELTIIGSTGGT---REDFEEALDL 270 (271)
T ss_pred cCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEEccCCCCCCc-ccHHHHHhcceEEEEeecCC---HHHHHHHHhh
Confidence 44 8999999999845589999999999 999999866543222 22445677899999987544 3456666654
No 124
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.93 E-value=2.3e-23 Score=173.73 Aligned_cols=243 Identities=18% Similarity=0.310 Sum_probs=189.8
Q ss_pred CCCCccccCCCCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-C
Q 025101 3 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-G 81 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g 81 (258)
|.++.+++ +||+|+++...|+|++|+.++.+.++++|+++++++++.+++++.+||+++.+...+.+|++|+|+|+ |
T Consensus 72 g~~~~~~~--~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g 149 (337)
T cd08275 72 GEGVKDFK--VGDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAG 149 (337)
T ss_pred CCCCcCCC--CCCEEEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcc
Confidence 34555677 89999987666899999999999999999999999999999999999999878888999999999997 9
Q ss_pred HHHHHHHHHHHHc-CCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhhHHHHH
Q 025101 82 SIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAY 160 (258)
Q Consensus 82 ~~G~~a~~l~~~~-g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~ 160 (258)
++|++++++++.. +. .++.. ..+++.++++++|++.+++... .++...++..+++++|+++|++|+.. ...++
T Consensus 150 ~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~d~v~~~~g~~~-~~~~~ 223 (337)
T cd08275 150 GVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDYRT---QDYVEEVKKISPEGVDIVLDALGGED-TRKSY 223 (337)
T ss_pred hHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeCCC---CcHHHHHHHHhCCCceEEEECCcHHH-HHHHH
Confidence 9999999999988 43 33222 2345778888899988888877 67888888777558999999999865 88999
Q ss_pred HhhhcCCceEEEecccCCCC--ce-------------eechHHHHhcCceEEecccCCCCCC-----CcHHHHHHHHHcC
Q 025101 161 ACCRKGWGKTIVLGVDQPGS--QL-------------SLSSFEVLHSGKILMGSLFGGLKAK-----SDIPILLKRYMDK 220 (258)
Q Consensus 161 ~~l~~~~G~~v~~g~~~~~~--~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g 220 (258)
++++++ |+++.+|...... .. .......+.++.++.++........ ..+.++++++.++
T Consensus 224 ~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (337)
T cd08275 224 DLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEG 302 (337)
T ss_pred HhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCC
Confidence 999999 9999998553211 11 1122345677888888754321111 2356788888888
Q ss_pred CCCCCcccccccccccHHHHHHHHhcCCee-EEEEee
Q 025101 221 ELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 256 (258)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 256 (258)
.+.. ..++.|++++++++++.+.++... |+++++
T Consensus 303 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 303 KIKP--KIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred CCCC--ceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 6553 356889999999999999887666 888764
No 125
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.92 E-value=1e-23 Score=174.46 Aligned_cols=235 Identities=22% Similarity=0.264 Sum_probs=176.8
Q ss_pred CCCCccccCCCCceeeeecc---ccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEc
Q 025101 3 RDQTSRFKDLRGETIHHFVS---VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG 79 (258)
Q Consensus 3 ~~~~~~~~~~~G~~v~~~~~---~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G 79 (258)
|+++..++ +||+|+.+.. .|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....+.+|++++|+|
T Consensus 74 G~~v~~~~--~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g 151 (319)
T cd08267 74 GSGVTRFK--VGDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLING 151 (319)
T ss_pred CCCCCCCC--CCCEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEc
Confidence 44566777 8999997642 589999999999999999999999999999999999999987777799999999999
Q ss_pred c-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCCh-hhH
Q 025101 80 L-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA-SLV 156 (258)
Q Consensus 80 ~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~ 156 (258)
+ |++|++++++++..|+ +|++++++ ++.+.++++|++++++... .++. ...+.+ ++|+++||+|+. ...
T Consensus 152 ~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~---~~~~~~~~~d~vi~~~~~~~~~~ 223 (319)
T cd08267 152 ASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV---ALTAGGEKYDVIFDAVGNSPFSL 223 (319)
T ss_pred CCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---hhccCCCCCcEEEECCCchHHHH
Confidence 7 9999999999999999 89988865 8888889999988888765 3333 334444 899999999853 224
Q ss_pred HHHHHhhhcCCceEEEecccCCCCceee---chHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccc
Q 025101 157 QEAYACCRKGWGKTIVLGVDQPGSQLSL---SSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK 233 (258)
Q Consensus 157 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 233 (258)
...+..++++ |+++.+|.......... ....... ...+....... ..+.+.++++++.++.++ +++++.|+
T Consensus 224 ~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~--~~~~~~~~ 297 (319)
T cd08267 224 YRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGG-GRRLKFFLAKP--NAEDLEQLAELVEEGKLK--PVIDSVYP 297 (319)
T ss_pred HHhhhccCCC-CEEEEeccccccccccccccchhhccc-cceEEEEEecC--CHHHHHHHHHHHHCCCee--eeeeeEEc
Confidence 4444459999 99999986543222111 1111111 12222221111 145788899999998654 34678999
Q ss_pred cccHHHHHHHHhcCCee-EEE
Q 025101 234 FEEINSAFDLLIKGKCL-RCV 253 (258)
Q Consensus 234 ~~~~~~a~~~~~~~~~~-k~v 253 (258)
++++++|++.+.++... |++
T Consensus 298 ~~~i~~a~~~~~~~~~~~~vv 318 (319)
T cd08267 298 LEDAPEAYRRLKSGRARGKVV 318 (319)
T ss_pred HHHHHHHHHHHhcCCCCCcEe
Confidence 99999999999877655 665
No 126
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.92 E-value=2.5e-23 Score=171.26 Aligned_cols=227 Identities=18% Similarity=0.268 Sum_probs=180.7
Q ss_pred CCCccccCCCCceeeeec---cccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc
Q 025101 4 DQTSRFKDLRGETIHHFV---SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL 80 (258)
Q Consensus 4 ~~~~~~~~~~G~~v~~~~---~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~ 80 (258)
.++..++ +||+|+++. ..|+|++|+.++...++++|+++++.+++.+++.+.+|++++.....+.+|++++|+|+
T Consensus 76 ~~~~~~~--~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~ 153 (309)
T cd05289 76 PGVTGFK--VGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGA 153 (309)
T ss_pred CCCCCCC--CCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecC
Confidence 3444577 899999764 25899999999999999999999999999999999999998877777899999999996
Q ss_pred -CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHH
Q 025101 81 -GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQE 158 (258)
Q Consensus 81 -g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~ 158 (258)
|.+|++++++++..|+ +|+++++++ +.+.++++|++.+++... .++.+ ...+ ++|.++|++|+.. ...
T Consensus 154 ~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~----~~~~~~~d~v~~~~~~~~-~~~ 223 (309)
T cd05289 154 AGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVIDYTK---GDFER----AAAPGGVDAVLDTVGGET-LAR 223 (309)
T ss_pred CchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEEeCCC---Cchhh----ccCCCCceEEEECCchHH-HHH
Confidence 9999999999999999 888888777 888888899888887765 34333 3333 8999999999885 899
Q ss_pred HHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHHcCCCCCCcccccccccccHH
Q 025101 159 AYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEIN 238 (258)
Q Consensus 159 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 238 (258)
++++++++ |+++.+|...... . ....++.++........ ...+.++++++.++.++ +.+++.|++++++
T Consensus 224 ~~~~l~~~-g~~v~~g~~~~~~--~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 292 (309)
T cd05289 224 SLALVKPG-GRLVSIAGPPPAE--Q----AAKRRGVRAGFVFVEPD--GEQLAELAELVEAGKLR--PVVDRVFPLEDAA 292 (309)
T ss_pred HHHHHhcC-cEEEEEcCCCcch--h----hhhhccceEEEEEeccc--HHHHHHHHHHHHCCCEE--EeeccEEcHHHHH
Confidence 99999999 9999998643311 1 22344566555433221 45688899999988654 3467899999999
Q ss_pred HHHHHHhcCCee-EEE
Q 025101 239 SAFDLLIKGKCL-RCV 253 (258)
Q Consensus 239 ~a~~~~~~~~~~-k~v 253 (258)
+|++.+..+... |++
T Consensus 293 ~a~~~~~~~~~~~kvv 308 (309)
T cd05289 293 EAHERLESGHARGKVV 308 (309)
T ss_pred HHHHHHHhCCCCCcEe
Confidence 999998877655 665
No 127
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.86 E-value=6.9e-21 Score=137.24 Aligned_cols=128 Identities=28% Similarity=0.491 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHH
Q 025101 82 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAY 160 (258)
Q Consensus 82 ~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~ 160 (258)
++|++++|+||..|+ +|++++++++|+++++++|++.++++++ .++.+.+++.+++ ++|+||||+|.+..++.++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~ 76 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI 76 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence 589999999999996 9999999999999999999999999998 8899999999998 9999999999888899999
Q ss_pred HhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHHHHHHHH
Q 025101 161 ACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYM 218 (258)
Q Consensus 161 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (258)
++++++ |+++.+|... ....+++...++.+++++.+++.++ .++++++++++.
T Consensus 77 ~~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la 129 (130)
T PF00107_consen 77 KLLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLA 129 (130)
T ss_dssp HHEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH
T ss_pred HHhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhc
Confidence 999999 9999999876 4678888999999999999998655 578888888875
No 128
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.67 E-value=5e-15 Score=124.47 Aligned_cols=177 Identities=14% Similarity=0.154 Sum_probs=138.9
Q ss_pred hhhhhhhhcCC-CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHH
Q 025101 59 GVGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIID 137 (258)
Q Consensus 59 a~~~l~~~~~~-~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~ 137 (258)
.+.++.+..++ -+|++|+|+|+|++|+.+++.++.+|+ +|++++.++.|.+.++++|++.+ + ..+.+
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~--------~~e~v-- 255 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T--------MEEAV-- 255 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c--------HHHHH--
Confidence 34444444443 589999999999999999999999999 89999999999999999998433 1 11122
Q ss_pred hcCCCCCEEEEecCChhhHHHH-HHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHH--HHH
Q 025101 138 MTDGGADYCFECVGLASLVQEA-YACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIP--ILL 214 (258)
Q Consensus 138 ~~~~~~d~v~d~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 214 (258)
.++|+||+|+|.+..+... +..++++ |.++.+|.. ...++...+..+++++.+++.... ...++ ..+
T Consensus 256 ---~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI 325 (413)
T cd00401 256 ---KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRI 325 (413)
T ss_pred ---cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchh
Confidence 1689999999998878876 9999999 999999843 345677777888999998864331 12455 789
Q ss_pred HHHHcCCC-CCCcccccc-----cccc-cHHHHHHHHhcCCee--EEEEeeC
Q 025101 215 KRYMDKEL-ELDKFVTHE-----MKFE-EINSAFDLLIKGKCL--RCVIWMG 257 (258)
Q Consensus 215 ~~~~~g~~-~~~~~~~~~-----~~~~-~~~~a~~~~~~~~~~--k~vi~~~ 257 (258)
.++.+|++ .+.+.++|. ++|+ |+.+++..+.++... |+++.+.
T Consensus 326 ~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 326 ILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred hhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 99999988 888889898 8999 999999999876543 8877653
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.56 E-value=7.4e-14 Score=120.29 Aligned_cols=155 Identities=20% Similarity=0.260 Sum_probs=114.5
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceE-EcCCCCC----------CccHHHHHHH
Q 025101 69 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCG----------DKSVSQIIID 137 (258)
Q Consensus 69 ~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~~----------~~~~~~~i~~ 137 (258)
..++++|+|+|+|++|+++++.|+.+|+ +|++++.++++.+.++++|++.+ +|..+.+ .+++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4579999999999999999999999999 89999999999999999999843 6654310 0123333333
Q ss_pred h-cC--CCCCEEEEecCCh-----hh-HHHHHHhhhcCCceEEEecccCCCC-ceeechHHHHh-cCceEEecccCCCCC
Q 025101 138 M-TD--GGADYCFECVGLA-----SL-VQEAYACCRKGWGKTIVLGVDQPGS-QLSLSSFEVLH-SGKILMGSLFGGLKA 206 (258)
Q Consensus 138 ~-~~--~~~d~v~d~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~ 206 (258)
. .+ +++|+||+|+|.+ .. .+++++.++++ |+++.+|...+.. ..+.+...++. +++++.|... .
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~-- 315 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--L-- 315 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--C--
Confidence 3 22 2799999999963 34 39999999999 9999999753321 23444445554 7999998752 2
Q ss_pred CCcHH-HHHHHHHcCCCCCCcccc
Q 025101 207 KSDIP-ILLKRYMDKELELDKFVT 229 (258)
Q Consensus 207 ~~~~~-~~~~~~~~g~~~~~~~~~ 229 (258)
...+. +..+++.++.+.+.++++
T Consensus 316 P~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 316 PSRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred chhHHHHHHHHHHhCCccHHHHhc
Confidence 23455 589999999877766665
No 130
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.43 E-value=6e-14 Score=100.48 Aligned_cols=120 Identities=21% Similarity=0.326 Sum_probs=77.2
Q ss_pred cCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecC--ChhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhc
Q 025101 115 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG--LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS 192 (258)
Q Consensus 115 ~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 192 (258)
+|+++++|+++ +++ ..++++|+|||++| ....+..+++++ ++ |+++.++. .........+
T Consensus 1 LGAd~vidy~~---~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~ 62 (127)
T PF13602_consen 1 LGADEVIDYRD---TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLK 62 (127)
T ss_dssp CT-SEEEETTC---SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHH
T ss_pred CCcCEEecCCC---ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhc
Confidence 68999999997 666 22348999999999 555346777788 99 99998873 1111111122
Q ss_pred CceEEecccCC--CC--CCCcHHHHHHHHHcCCCCCCcccccccccccHHHHHHHHhcCCee-EEEE
Q 025101 193 GKILMGSLFGG--LK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 254 (258)
Q Consensus 193 ~~~~~~~~~~~--~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi 254 (258)
...+.+..... .. ..+.++++++++.+|+++ +.+.++||++++.+|++.+++++.. |+||
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~--~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLK--PPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeE--EeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 23333332221 00 134599999999999655 4588899999999999999999888 9986
No 131
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.92 E-value=2.8e-08 Score=80.56 Aligned_cols=161 Identities=20% Similarity=0.287 Sum_probs=100.4
Q ss_pred hcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC-eEEEEcCCcchHHHHHhc----CCceEEcCCCCCCccHHHHHHHh--
Q 025101 66 TANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDM-- 138 (258)
Q Consensus 66 ~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~-~v~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~i~~~-- 138 (258)
...+++|++||.+|+|+ |..++++++..|.. +|++++.+++..+.+++. |...+- ... .+ +.++
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~---~d----~~~l~~ 142 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRL---GE----IEALPV 142 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEE---cc----hhhCCC
Confidence 35678999999999987 88888888877753 799999999998888763 333221 111 11 2222
Q ss_pred cCCCCCEEEEec------CChhhHHHHHHhhhcCCceEEEecccCCCCceeechHHHHhcCceEEecccCCCCCCCcHHH
Q 025101 139 TDGGADYCFECV------GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPI 212 (258)
Q Consensus 139 ~~~~~d~v~d~~------g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (258)
.++.||+|+... .....+..+.+.|+|+ |++++.+..... . .+ ..+.+...+.+..... .....+
T Consensus 143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~--~~--~~~~~~~~~~~~~~~~---~~~~~e 213 (272)
T PRK11873 143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-E--LP--EEIRNDAELYAGCVAG---ALQEEE 213 (272)
T ss_pred CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-C--CC--HHHHHhHHHHhccccC---CCCHHH
Confidence 223799998543 2345689999999999 999987754322 1 11 1122222222111111 234566
Q ss_pred HHHHHHc-CCCCCCcccccccccccHHHHHHHH
Q 025101 213 LLKRYMD-KELELDKFVTHEMKFEEINSAFDLL 244 (258)
Q Consensus 213 ~~~~~~~-g~~~~~~~~~~~~~~~~~~~a~~~~ 244 (258)
+.+++.+ |...........++++++.++++.+
T Consensus 214 ~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~ 246 (272)
T PRK11873 214 YLAMLAEAGFVDITIQPKREYRIPDAREFLEDW 246 (272)
T ss_pred HHHHHHHCCCCceEEEeccceecccHHHHHHHh
Confidence 6777765 4333333345668889999999888
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.89 E-value=2.1e-08 Score=86.68 Aligned_cols=108 Identities=19% Similarity=0.222 Sum_probs=81.9
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCce-EEcCCCC----------CCccHHHHHHHh
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNC----------GDKSVSQIIIDM 138 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~-vi~~~~~----------~~~~~~~~i~~~ 138 (258)
.++++++|+|+|.+|++++++++.+|+ +|+++++++++++.++++|++. .++..+. -.+++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 357899999999999999999999999 8999999999999999999865 3332210 002333333333
Q ss_pred cC---CCCCEEEEec---CChh---hHHHHHHhhhcCCceEEEecccCCC
Q 025101 139 TD---GGADYCFECV---GLAS---LVQEAYACCRKGWGKTIVLGVDQPG 179 (258)
Q Consensus 139 ~~---~~~d~v~d~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~~ 179 (258)
.. .++|+||+|+ |.+. ..+++++.++++ +.++.++...+.
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG 289 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG 289 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC
Confidence 33 2799999999 5433 567889999999 999999866553
No 133
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.70 E-value=5.4e-07 Score=76.61 Aligned_cols=104 Identities=21% Similarity=0.244 Sum_probs=79.0
Q ss_pred hhhhhhhhhcCCC-CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHH
Q 025101 58 TGVGAAWRTANVE-VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIII 136 (258)
Q Consensus 58 ta~~~l~~~~~~~-~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~ 136 (258)
.+|.++.+..++. .|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|+. +.+ +.+.+
T Consensus 197 s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~--------l~eal- 265 (425)
T PRK05476 197 SLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT--------MEEAA- 265 (425)
T ss_pred hhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC--------HHHHH-
Confidence 3455554443444 89999999999999999999999999 899999998887766666764 321 22222
Q ss_pred HhcCCCCCEEEEecCChhhHH-HHHHhhhcCCceEEEecccC
Q 025101 137 DMTDGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVDQ 177 (258)
Q Consensus 137 ~~~~~~~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 177 (258)
. ++|+||+++|....+. ..+..++++ +.++..|...
T Consensus 266 ---~-~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 ---E-LGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred ---h-CCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 1 6999999999887676 677888888 8888888543
No 134
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.67 E-value=4.3e-07 Score=74.25 Aligned_cols=96 Identities=20% Similarity=0.290 Sum_probs=76.3
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEec
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 150 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~ 150 (258)
.+++++|+|.|.+|+.+++.++.+|+ +|+++++++++.+.++++|+..+ .. +++. +... ++|+||+|+
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~-----~~l~----~~l~-~aDiVI~t~ 218 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL-----SELA----EEVG-KIDIIFNTI 218 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH-----HHHH----HHhC-CCCEEEECC
Confidence 58999999999999999999999999 99999999988888888887532 21 1222 2222 699999999
Q ss_pred CChhhHHHHHHhhhcCCceEEEecccCCC
Q 025101 151 GLASLVQEAYACCRKGWGKTIVLGVDQPG 179 (258)
Q Consensus 151 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 179 (258)
+........++.++++ +.++.++..++.
T Consensus 219 p~~~i~~~~l~~~~~g-~vIIDla~~pgg 246 (296)
T PRK08306 219 PALVLTKEVLSKMPPE-ALIIDLASKPGG 246 (296)
T ss_pred ChhhhhHHHHHcCCCC-cEEEEEccCCCC
Confidence 8765456777889998 999999876654
No 135
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.59 E-value=1.5e-07 Score=77.59 Aligned_cols=108 Identities=21% Similarity=0.242 Sum_probs=79.8
Q ss_pred ceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCC----CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchH-
Q 025101 35 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANV----EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF- 109 (258)
Q Consensus 35 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~----~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~- 109 (258)
+.++++|+.++.+.+.... +.+++++++. .+.. -++.+|+|+|+|.+|..+++.++..|..+|+++++++++.
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~-~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVE-LAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHH-HHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 3567788888888877765 6677777643 3322 3689999999999999999999988877899999998875
Q ss_pred HHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChhh
Q 025101 110 EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASL 155 (258)
Q Consensus 110 ~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~ 155 (258)
++++++|+. +++. +++.+.+. .+|+||.|++.+..
T Consensus 217 ~la~~~g~~-~~~~-----~~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 217 ELAKELGGN-AVPL-----DELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHHHcCCe-EEeH-----HHHHHHHh-----cCCEEEECCCCCch
Confidence 677788873 3332 12322222 58999999998774
No 136
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.57 E-value=1.5e-06 Score=73.43 Aligned_cols=101 Identities=22% Similarity=0.270 Sum_probs=76.8
Q ss_pred hhhhhhhcC-CCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHh
Q 025101 60 VGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM 138 (258)
Q Consensus 60 ~~~l~~~~~-~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~ 138 (258)
+.++.+..+ ...|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...++..|+. +.+ ..+.+
T Consensus 182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~--------leeal--- 248 (406)
T TIGR00936 182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT--------MEEAA--- 248 (406)
T ss_pred HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC--------HHHHH---
Confidence 344434333 3679999999999999999999999999 899999888887777777763 321 11222
Q ss_pred cCCCCCEEEEecCChhhHHH-HHHhhhcCCceEEEeccc
Q 025101 139 TDGGADYCFECVGLASLVQE-AYACCRKGWGKTIVLGVD 176 (258)
Q Consensus 139 ~~~~~d~v~d~~g~~~~~~~-~~~~l~~~~G~~v~~g~~ 176 (258)
.+.|+||+++|....+.. .+..++++ +.++..|..
T Consensus 249 --~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~ 284 (406)
T TIGR00936 249 --KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHF 284 (406)
T ss_pred --hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCC
Confidence 158999999999887764 78888888 888888754
No 137
>PLN02494 adenosylhomocysteinase
Probab=98.45 E-value=3.3e-06 Score=72.17 Aligned_cols=101 Identities=18% Similarity=0.239 Sum_probs=78.0
Q ss_pred hhhhhhhcCC-CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHh
Q 025101 60 VGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM 138 (258)
Q Consensus 60 ~~~l~~~~~~-~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~ 138 (258)
+.++.+..++ -.|++++|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|.. +++ ..+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~-vv~--------leEal~-- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQ-VLT--------LEDVVS-- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCe-ecc--------HHHHHh--
Confidence 3344444333 579999999999999999999999999 899999988877677777764 221 222222
Q ss_pred cCCCCCEEEEecCChhhH-HHHHHhhhcCCceEEEeccc
Q 025101 139 TDGGADYCFECVGLASLV-QEAYACCRKGWGKTIVLGVD 176 (258)
Q Consensus 139 ~~~~~d~v~d~~g~~~~~-~~~~~~l~~~~G~~v~~g~~ 176 (258)
..|++++++|....+ ...+..++++ +.++.+|..
T Consensus 309 ---~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 309 ---EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred ---hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 589999999987743 7899999999 999999864
No 138
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.41 E-value=1.3e-06 Score=66.51 Aligned_cols=117 Identities=18% Similarity=0.206 Sum_probs=84.6
Q ss_pred CCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHH----HHhcCCce
Q 025101 44 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFGVTE 119 (258)
Q Consensus 44 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~----~~~~g~~~ 119 (258)
++.....++..+...|.. .+...+++|++||-+|+|+ |..++-+++..| +|+.+++.++=.+. ++.+|..+
T Consensus 47 lpi~~gqtis~P~~vA~m--~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~n 121 (209)
T COG2518 47 LPIGCGQTISAPHMVARM--LQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYEN 121 (209)
T ss_pred ccCCCCceecCcHHHHHH--HHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCc
Confidence 344455555556666653 4788999999999999984 999999999888 89999988874444 45678654
Q ss_pred EE-cCCCCCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEec
Q 025101 120 FV-NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 120 vi-~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 174 (258)
|. ...+ .-..+.+. .||.|+-+.+.+..-+..++.|+++ |+++..-
T Consensus 122 V~v~~gD--------G~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~Pv 169 (209)
T COG2518 122 VTVRHGD--------GSKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPV 169 (209)
T ss_pred eEEEECC--------cccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEE
Confidence 32 2222 12233343 8999998888877567889999999 9987664
No 139
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.31 E-value=8.8e-06 Score=68.73 Aligned_cols=99 Identities=21% Similarity=0.261 Sum_probs=70.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEe
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 149 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~ 149 (258)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+.. ++........+ .+++.+.+ . .+|+||+|
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~--~~~l~~~l----~-~aDvVI~a 237 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN--AYEIEDAV----K-RADLLIGA 237 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC--HHHHHHHH----c-cCCEEEEc
Confidence 34569999999999999999999999 89999999888776654 55432222221 12222222 2 69999999
Q ss_pred c---CC--hh-hHHHHHHhhhcCCceEEEecccCC
Q 025101 150 V---GL--AS-LVQEAYACCRKGWGKTIVLGVDQP 178 (258)
Q Consensus 150 ~---g~--~~-~~~~~~~~l~~~~G~~v~~g~~~~ 178 (258)
+ +. +. .....+..++++ +.++.++...+
T Consensus 238 ~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G 271 (370)
T TIGR00518 238 VLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG 271 (370)
T ss_pred cccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence 7 32 21 136777889998 99999986554
No 140
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.29 E-value=2.1e-05 Score=62.94 Aligned_cols=139 Identities=21% Similarity=0.229 Sum_probs=88.5
Q ss_pred CCceeeeeccccceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHH
Q 025101 13 RGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGAR 92 (258)
Q Consensus 13 ~G~~v~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~ 92 (258)
.|++++-.+ +|.+|.. +...++++++++++..+. .+.... .+..+. ..+.++++||.+|+|. |..++.+++
T Consensus 69 ~g~~~~i~p---~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~ 139 (250)
T PRK00517 69 IGDRLWIVP---SWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK 139 (250)
T ss_pred EcCCEEEEC---CCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH
Confidence 566555322 4667654 777788888888877654 221111 122221 1256889999999986 887776555
Q ss_pred HcCCCeEEEEcCCcchHHHHHhc----CCceEEcCCCCCCccHHHHHHHhcCC-CCCEEEEecCCh---hhHHHHHHhhh
Q 025101 93 LCGATRIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA---SLVQEAYACCR 164 (258)
Q Consensus 93 ~~g~~~v~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~---~~~~~~~~~l~ 164 (258)
.|+.+|++++.++...+.+++. +....+.... +. .||+|+-+.... ..++.+.+.++
T Consensus 140 -~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~--------------~~~~fD~Vvani~~~~~~~l~~~~~~~Lk 204 (250)
T PRK00517 140 -LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQ--------------GDLKADVIVANILANPLLELAPDLARLLK 204 (250)
T ss_pred -cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEcc--------------CCCCcCEEEEcCcHHHHHHHHHHHHHhcC
Confidence 5775799999999888877652 2211111111 11 599998765443 23668888999
Q ss_pred cCCceEEEeccc
Q 025101 165 KGWGKTIVLGVD 176 (258)
Q Consensus 165 ~~~G~~v~~g~~ 176 (258)
|+ |.++..|..
T Consensus 205 pg-G~lilsgi~ 215 (250)
T PRK00517 205 PG-GRLILSGIL 215 (250)
T ss_pred CC-cEEEEEECc
Confidence 99 999987643
No 141
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.23 E-value=2.6e-05 Score=66.97 Aligned_cols=100 Identities=20% Similarity=0.280 Sum_probs=75.2
Q ss_pred hhhhhhcC-CCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhc
Q 025101 61 GAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT 139 (258)
Q Consensus 61 ~~l~~~~~-~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~ 139 (258)
.++.+..+ .-.|++++|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+. +. ++.+.++
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~-~~--------~leell~--- 308 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQ-VV--------TLEDVVE--- 308 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCce-ec--------cHHHHHh---
Confidence 44444333 3479999999999999999999999999 899998887776555556653 22 1222222
Q ss_pred CCCCCEEEEecCChhhHH-HHHHhhhcCCceEEEeccc
Q 025101 140 DGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVD 176 (258)
Q Consensus 140 ~~~~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 176 (258)
..|+|+.++|....+. ..+..++++ +.++.+|..
T Consensus 309 --~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~ 343 (476)
T PTZ00075 309 --TADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHF 343 (476)
T ss_pred --cCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCC
Confidence 6999999999877664 889999999 999988854
No 142
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.23 E-value=4.8e-05 Score=61.98 Aligned_cols=95 Identities=18% Similarity=0.221 Sum_probs=71.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEec
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 150 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~ 150 (258)
.|++++|+|.|.+|.++++.++.+|+ +|++.++++++.+.+.+.|.. .+.. +++.+.+ . ++|+||+|+
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~-~~~~-----~~l~~~l----~-~aDiVint~ 217 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLI-PFPL-----NKLEEKV----A-EIDIVINTI 217 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCe-eecH-----HHHHHHh----c-cCCEEEECC
Confidence 57899999999999999999999999 999999998887777777753 2211 1222222 1 699999999
Q ss_pred CChhhHHHHHHhhhcCCceEEEecccCC
Q 025101 151 GLASLVQEAYACCRKGWGKTIVLGVDQP 178 (258)
Q Consensus 151 g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 178 (258)
+....-...++.++++ ..++.++..++
T Consensus 218 P~~ii~~~~l~~~k~~-aliIDlas~Pg 244 (287)
T TIGR02853 218 PALVLTADVLSKLPKH-AVIIDLASKPG 244 (287)
T ss_pred ChHHhCHHHHhcCCCC-eEEEEeCcCCC
Confidence 7654234566778887 88888886554
No 143
>PRK08324 short chain dehydrogenase; Validated
Probab=98.21 E-value=1.6e-05 Score=72.78 Aligned_cols=137 Identities=20% Similarity=0.269 Sum_probs=87.4
Q ss_pred ceeeeEEEecceEEEcCCCCCccchhhcchhhhhhhhhhhhhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEc
Q 025101 25 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD 103 (258)
Q Consensus 25 ~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~ 103 (258)
++++|..+|+..++.+ +..+.+++..... ...+.-+|+++||+|+ |++|+.+++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 5678888888777776 5566666542110 0122346899999986 9999999999999999 899999
Q ss_pred CCcchHHHHH-hcCC--c---eEEcCCCCCCcc-HHHHHHHhc--CCCCCEEEEecCCh---------------------
Q 025101 104 VISEKFEIGK-RFGV--T---EFVNSKNCGDKS-VSQIIIDMT--DGGADYCFECVGLA--------------------- 153 (258)
Q Consensus 104 ~~~~~~~~~~-~~g~--~---~vi~~~~~~~~~-~~~~i~~~~--~~~~d~v~d~~g~~--------------------- 153 (258)
+++++.+.+. +++. . ...|..+ .+ +...+.+.. .+++|++|++.|..
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd---~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~ 530 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD---EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNA 530 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC---HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence 9988766543 3432 1 1234333 33 222233221 23799999999831
Q ss_pred ----hhHHHHHHhhhc---CCceEEEecccC
Q 025101 154 ----SLVQEAYACCRK---GWGKTIVLGVDQ 177 (258)
Q Consensus 154 ----~~~~~~~~~l~~---~~G~~v~~g~~~ 177 (258)
..++.++..++. + |+++.+++..
T Consensus 531 ~g~~~l~~~~~~~l~~~~~~-g~iV~vsS~~ 560 (681)
T PRK08324 531 TGHFLVAREAVRIMKAQGLG-GSIVFIASKN 560 (681)
T ss_pred HHHHHHHHHHHHHHHhcCCC-cEEEEECCcc
Confidence 123444556655 5 8899888643
No 144
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.20 E-value=2.9e-06 Score=75.87 Aligned_cols=80 Identities=19% Similarity=0.240 Sum_probs=58.8
Q ss_pred CCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCC---------------------cchHHHHHhcCCceEEcCCCC
Q 025101 68 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI---------------------SEKFEIGKRFGVTEFVNSKNC 126 (258)
Q Consensus 68 ~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~---------------------~~~~~~~~~~g~~~vi~~~~~ 126 (258)
.+.+|++|+|+|+|+.|+++++.++..|+ +|++++.. +.+.+.++++|++..++....
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 36789999999999999999999999999 89998853 245567788998766654320
Q ss_pred CCccH-HHHHHHhcCCCCCEEEEecCChh
Q 025101 127 GDKSV-SQIIIDMTDGGADYCFECVGLAS 154 (258)
Q Consensus 127 ~~~~~-~~~i~~~~~~~~d~v~d~~g~~~ 154 (258)
.+. .+.+. .++|+||+++|...
T Consensus 212 --~~~~~~~~~----~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 212 --EDITLEQLE----GEFDAVFVAIGAQL 234 (564)
T ss_pred --CcCCHHHHH----hhCCEEEEeeCCCC
Confidence 111 12221 26999999999764
No 145
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.14 E-value=1.3e-05 Score=57.72 Aligned_cols=75 Identities=24% Similarity=0.284 Sum_probs=55.8
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCc--eEEcCCCCCCccHHHHHHHhcCCCCCEE
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT--EFVNSKNCGDKSVSQIIIDMTDGGADYC 146 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~--~vi~~~~~~~~~~~~~i~~~~~~~~d~v 146 (258)
-++.+++|+|+|++|.+++..+...|+++|+++.|+.+|.+.+ ++++.. .+++..+ +.+.+. .+|+|
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~-----~~Div 79 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEALQ-----EADIV 79 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH-----TESEE
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHHh-----hCCeE
Confidence 3689999999999999999999999997899999999887655 456422 3444433 322222 69999
Q ss_pred EEecCChh
Q 025101 147 FECVGLAS 154 (258)
Q Consensus 147 ~d~~g~~~ 154 (258)
|+|++.+.
T Consensus 80 I~aT~~~~ 87 (135)
T PF01488_consen 80 INATPSGM 87 (135)
T ss_dssp EE-SSTTS
T ss_pred EEecCCCC
Confidence 99998764
No 146
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.14 E-value=4.2e-06 Score=72.04 Aligned_cols=89 Identities=21% Similarity=0.281 Sum_probs=62.9
Q ss_pred hhhhhhhhhhhhc---CCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHH-HHHhcCCceEEcCCCCCCcc
Q 025101 55 GVSTGVGAAWRTA---NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKS 130 (258)
Q Consensus 55 ~~~ta~~~l~~~~---~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~-~~~~~g~~~vi~~~~~~~~~ 130 (258)
+.+.+++++.... ...++++|+|+|+|.+|.++++.++..|+.+|+++.++.++.+ +++++|.+ +++.. +
T Consensus 162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~-----~ 235 (423)
T PRK00045 162 AVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLD-----E 235 (423)
T ss_pred CcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHH-----H
Confidence 4555566543221 2257899999999999999999999999878999999988855 66778753 33221 2
Q ss_pred HHHHHHHhcCCCCCEEEEecCChh
Q 025101 131 VSQIIIDMTDGGADYCFECVGLAS 154 (258)
Q Consensus 131 ~~~~i~~~~~~~~d~v~d~~g~~~ 154 (258)
..+.+ .++|+||+|+|.+.
T Consensus 236 ~~~~l-----~~aDvVI~aT~s~~ 254 (423)
T PRK00045 236 LPEAL-----AEADIVISSTGAPH 254 (423)
T ss_pred HHHHh-----ccCCEEEECCCCCC
Confidence 22222 16999999999765
No 147
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=98.01 E-value=0.0001 Score=55.12 Aligned_cols=102 Identities=21% Similarity=0.298 Sum_probs=72.0
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCceEEcCCCCCCccHHHHHHHhcC
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~i~~~~~ 140 (258)
..+++++|+.++=+|+|. |...+++++.....+|++++++++..+..+ ++|.+++.-.. .+..+.+.++.
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~----g~Ap~~L~~~~- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVE----GDAPEALPDLP- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEe----ccchHhhcCCC-
Confidence 456789999888889874 888889996655559999999999887764 58876432221 12223333221
Q ss_pred CCCCEEEEecCC--hhhHHHHHHhhhcCCceEEEec
Q 025101 141 GGADYCFECVGL--ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 141 ~~~d~v~d~~g~--~~~~~~~~~~l~~~~G~~v~~g 174 (258)
.+|.+|---|. +..++.++..++++ |+++.-.
T Consensus 102 -~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~na 135 (187)
T COG2242 102 -SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANA 135 (187)
T ss_pred -CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEe
Confidence 59999954432 44688999999999 9998654
No 148
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.01 E-value=0.00023 Score=56.81 Aligned_cols=79 Identities=24% Similarity=0.297 Sum_probs=57.1
Q ss_pred CCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-----cCCc-eE--EcCCCCCCccHHHHHHH-hc
Q 025101 70 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVT-EF--VNSKNCGDKSVSQIIID-MT 139 (258)
Q Consensus 70 ~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-----~g~~-~v--i~~~~~~~~~~~~~i~~-~~ 139 (258)
..+.++||+|+ +++|...+..+...|+ +++.+.|+++|++.+.+ .|.. .+ +|..+ .+-...+.+ +.
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~---~~~~~~l~~~l~ 79 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD---PEALERLEDELK 79 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC---hhHHHHHHHHHH
Confidence 46789999997 8999999999999999 99999999999876633 3322 22 34444 444444443 22
Q ss_pred -CC-CCCEEEEecCC
Q 025101 140 -DG-GADYCFECVGL 152 (258)
Q Consensus 140 -~~-~~d~v~d~~g~ 152 (258)
.+ .+|+.+++.|.
T Consensus 80 ~~~~~IdvLVNNAG~ 94 (265)
T COG0300 80 ERGGPIDVLVNNAGF 94 (265)
T ss_pred hcCCcccEEEECCCc
Confidence 22 79999999986
No 149
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.99 E-value=4.2e-05 Score=59.51 Aligned_cols=79 Identities=22% Similarity=0.292 Sum_probs=59.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCC----ceEEcCCCCCCccHHHHHHHhcCC--C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV----TEFVNSKNCGDKSVSQIIIDMTDG--G 142 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~----~~vi~~~~~~~~~~~~~i~~~~~~--~ 142 (258)
+++.++|+|+ +++|.+.++.+...|+ +|+.+.|..++++.+ .+++. ...+|-.+ .+.....+..+... .
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence 4578999997 7999999999999999 999999999998765 45772 23455555 13444455555444 6
Q ss_pred CCEEEEecCC
Q 025101 143 ADYCFECVGL 152 (258)
Q Consensus 143 ~d~v~d~~g~ 152 (258)
+|+.+++.|-
T Consensus 82 iDiLvNNAGl 91 (246)
T COG4221 82 IDILVNNAGL 91 (246)
T ss_pred ccEEEecCCC
Confidence 9999998875
No 150
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.97 E-value=8e-05 Score=63.25 Aligned_cols=113 Identities=18% Similarity=0.239 Sum_probs=77.0
Q ss_pred hcchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCcc
Q 025101 51 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKS 130 (258)
Q Consensus 51 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 130 (258)
.+..+-...+..+.+..++++|++||.+|+| .|..+..+++..|+ +|++++.+++..+.+++.....-++... .+
T Consensus 147 ~L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D 221 (383)
T PRK11705 147 TLEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QD 221 (383)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cc
Confidence 3443444555556677888999999999997 47788888988888 9999999999999887643211111111 12
Q ss_pred HHHHHHHhcCCCCCEEEEe-----cCC---hhhHHHHHHhhhcCCceEEEec
Q 025101 131 VSQIIIDMTDGGADYCFEC-----VGL---ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 131 ~~~~i~~~~~~~~d~v~d~-----~g~---~~~~~~~~~~l~~~~G~~v~~g 174 (258)
+. +. .+.+|.|+.. +|. +..+..+.+.|+|+ |.+++..
T Consensus 222 ~~----~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 222 YR----DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred hh----hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 21 11 2479998743 343 24478889999999 9988754
No 151
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.88 E-value=0.00011 Score=60.02 Aligned_cols=97 Identities=20% Similarity=0.257 Sum_probs=64.8
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhc----CCce-EEcCCCCCCccHHHHHHHhcCCCC
Q 025101 69 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTE-FVNSKNCGDKSVSQIIIDMTDGGA 143 (258)
Q Consensus 69 ~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~----g~~~-vi~~~~~~~~~~~~~i~~~~~~~~ 143 (258)
..++++||-+|+|. |..++.+++ .|+.+|++++.++...+.+++. +... +..... + ......++|
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~----~----~~~~~~~~f 226 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI----Y----LEQPIEGKA 226 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec----c----cccccCCCc
Confidence 45789999999987 877777665 5766999999999888777652 2211 111111 1 111122379
Q ss_pred CEEEEecCCh---hhHHHHHHhhhcCCceEEEeccc
Q 025101 144 DYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD 176 (258)
Q Consensus 144 d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~ 176 (258)
|+|+.+.... ..+..+.+.++|+ |.++..|..
T Consensus 227 DlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 227 DVIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred eEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 9999755433 3466778999999 999887743
No 152
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.87 E-value=0.0003 Score=55.66 Aligned_cols=103 Identities=21% Similarity=0.238 Sum_probs=66.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-Hhc---CCceEE--cCCCCCCccHHHHHHHhcC--C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF---GVTEFV--NSKNCGDKSVSQIIIDMTD--G 141 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~---g~~~vi--~~~~~~~~~~~~~i~~~~~--~ 141 (258)
++++++|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++ +..+.+ |..+ .+.+...+.+... +
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 80 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS--TESARNVIEKAAKVLN 80 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence 4689999987 8999999999999999 999999998877655 222 221222 2222 1222222222211 2
Q ss_pred CCCEEEEecCChh-----------------------hHHHHHHhhhcCCceEEEecccC
Q 025101 142 GADYCFECVGLAS-----------------------LVQEAYACCRKGWGKTIVLGVDQ 177 (258)
Q Consensus 142 ~~d~v~d~~g~~~-----------------------~~~~~~~~l~~~~G~~v~~g~~~ 177 (258)
++|.++.+.|... .++..+..+.++ |+++.++...
T Consensus 81 ~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~ 138 (238)
T PRK05786 81 AIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS 138 (238)
T ss_pred CCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence 6899998886420 134455566677 8898888653
No 153
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.85 E-value=0.00019 Score=54.65 Aligned_cols=112 Identities=19% Similarity=0.177 Sum_probs=74.6
Q ss_pred CCCEEEEEcc--CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hcCCc-eEEcCCCC-CCccHHHHHHHhcCCCCCE
Q 025101 71 VGSTVVIFGL--GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNC-GDKSVSQIIIDMTDGGADY 145 (258)
Q Consensus 71 ~g~~vlI~G~--g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~g~~-~vi~~~~~-~~~~~~~~i~~~~~~~~d~ 145 (258)
..+.|||+|+ |++|.+++.-...-|+ .|+++.|+-++++.+. ++|.. .-+|..+. +...+..++++-+.|..|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 4568999974 8999999888888899 9999999999988776 67742 23444430 1122334555555668999
Q ss_pred EEEecCChh----------hHH----------------HHHHhhhcCCceEEEecccCCCCceee
Q 025101 146 CFECVGLAS----------LVQ----------------EAYACCRKGWGKTIVLGVDQPGSQLSL 184 (258)
Q Consensus 146 v~d~~g~~~----------~~~----------------~~~~~l~~~~G~~v~~g~~~~~~~~~~ 184 (258)
.+++.|.+- .++ ..-..++.. |+++.+|+..+--+++|
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~~vpfpf 148 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAGVVPFPF 148 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeEEeccch
Confidence 999777531 011 112345666 99999987655334443
No 154
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.84 E-value=0.00024 Score=54.75 Aligned_cols=102 Identities=20% Similarity=0.405 Sum_probs=69.8
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHH----hcC-CceEEcCCCCCCccHHHHHHHh
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFG-VTEFVNSKNCGDKSVSQIIIDM 138 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~----~~g-~~~vi~~~~~~~~~~~~~i~~~ 138 (258)
....+.++++|+.+|+|. |.+++.+++..+. .+|++++.+++..+.++ ++| .+.+.... .+..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~----~d~~~~l~~~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK----GEAPEILFTI 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE----echhhhHhhc
Confidence 456788999999999987 9999999887642 38999999998887664 356 33222111 1222222222
Q ss_pred cCCCCCEEEEecCC---hhhHHHHHHhhhcCCceEEEe
Q 025101 139 TDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 139 ~~~~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~ 173 (258)
.+.+|.||...+. ...+..+.+.|+|+ |+++..
T Consensus 109 -~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 -NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred -CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2379999985543 34577888899999 998753
No 155
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.80 E-value=0.00029 Score=58.26 Aligned_cols=102 Identities=22% Similarity=0.315 Sum_probs=71.5
Q ss_pred hhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHH----hcCCceEEcCCCCCCccHHHHHHHh
Q 025101 64 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDM 138 (258)
Q Consensus 64 ~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~i~~~ 138 (258)
.+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ +.|.+.+.... .+..+.+.+.
T Consensus 73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~----gD~~~~~~~~ 147 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC----GDGYYGVPEF 147 (322)
T ss_pred HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe----CChhhccccc
Confidence 355678899999999998 49999999998763 26999999998766654 36655432222 2222222111
Q ss_pred cCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEe
Q 025101 139 TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 139 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 173 (258)
+.+|+|+.+.+.........+.++++ |+++..
T Consensus 148 --~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 148 --APYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred --CCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 26999999888766566788899999 997763
No 156
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.75 E-value=0.0006 Score=52.07 Aligned_cols=100 Identities=19% Similarity=0.165 Sum_probs=63.8
Q ss_pred hcCCCCCCEEEEEccCHHHHHHHHHHHHc-CCCeEEEEcCCcchHHHHHhcCCceE-EcCCCCCCccHHHHHHHhcCC-C
Q 025101 66 TANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDG-G 142 (258)
Q Consensus 66 ~~~~~~g~~vlI~G~g~~G~~a~~l~~~~-g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~i~~~~~~-~ 142 (258)
...+++|++||.+|+|+-+ .+..+++.. +..+|++++.++.+ +..++..+ .|..+ .+..+.+.+..++ +
T Consensus 27 ~~~i~~g~~VLDiG~GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~---~~~~~~l~~~~~~~~ 98 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD---EEVLNKIRERVGDDK 98 (188)
T ss_pred hcccCCCCEEEEecCCCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC---hhHHHHHHHHhCCCC
Confidence 4556899999999987644 444444443 43389999998864 11233311 23333 4445556555555 8
Q ss_pred CCEEEE-ec----CC------------hhhHHHHHHhhhcCCceEEEec
Q 025101 143 ADYCFE-CV----GL------------ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 143 ~d~v~d-~~----g~------------~~~~~~~~~~l~~~~G~~v~~g 174 (258)
+|+|+. .. |. ...+..+.+.++|+ |+++...
T Consensus 99 ~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 99 VDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred ccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 999995 32 21 24577889999999 9998754
No 157
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.74 E-value=0.00041 Score=58.35 Aligned_cols=95 Identities=17% Similarity=0.159 Sum_probs=67.8
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcC---Cc-eEEcCCCCCCccHHHHHHHhcCCCCCEEEE
Q 025101 73 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG---VT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE 148 (258)
Q Consensus 73 ~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g---~~-~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d 148 (258)
++|||+|+|.+|+.+++.+...|-.+|++++|+.++.+.+.+.. .. ..+|..+ .+.+.+.|+ ++|+||+
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d--~~al~~li~-----~~d~VIn 74 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD--VDALVALIK-----DFDLVIN 74 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC--hHHHHHHHh-----cCCEEEE
Confidence 57999999999999999988888449999999999998887653 22 3455544 123333333 4699999
Q ss_pred ecCChhhHHHHHHhhhcCCceEEEecc
Q 025101 149 CVGLASLVQEAYACCRKGWGKTIVLGV 175 (258)
Q Consensus 149 ~~g~~~~~~~~~~~l~~~~G~~v~~g~ 175 (258)
+.+.......+-.|++.+ =.++....
T Consensus 75 ~~p~~~~~~i~ka~i~~g-v~yvDts~ 100 (389)
T COG1748 75 AAPPFVDLTILKACIKTG-VDYVDTSY 100 (389)
T ss_pred eCCchhhHHHHHHHHHhC-CCEEEccc
Confidence 999877565555666665 55665553
No 158
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.73 E-value=0.00021 Score=61.50 Aligned_cols=77 Identities=21% Similarity=0.287 Sum_probs=57.7
Q ss_pred cCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHH-HHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCE
Q 025101 67 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY 145 (258)
Q Consensus 67 ~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~ 145 (258)
.+..++++|+|+|+|.+|..+++.++..|+.+|+++.++.++.+ +++++|.. .++. +++.+.+. ++|+
T Consensus 175 ~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~-----~~l~~~l~-----~aDv 243 (417)
T TIGR01035 175 FGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF-----EDLEEYLA-----EADI 243 (417)
T ss_pred hCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH-----HHHHHHHh-----hCCE
Confidence 34467899999999999999999999999668999999988754 66777763 3322 12222222 6999
Q ss_pred EEEecCChh
Q 025101 146 CFECVGLAS 154 (258)
Q Consensus 146 v~d~~g~~~ 154 (258)
||+|++.+.
T Consensus 244 Vi~aT~s~~ 252 (417)
T TIGR01035 244 VISSTGAPH 252 (417)
T ss_pred EEECCCCCC
Confidence 999998765
No 159
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.73 E-value=0.00019 Score=54.28 Aligned_cols=80 Identities=20% Similarity=0.233 Sum_probs=58.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcC---CceEEcCCCC-CCccHHHHHHHhcCCCCCE
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG---VTEFVNSKNC-GDKSVSQIIIDMTDGGADY 145 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g---~~~vi~~~~~-~~~~~~~~i~~~~~~~~d~ 145 (258)
.|.+|||+|+ +++|+.+++-...+|- +||+..|++++++.++..- .+.+.|..+. +-..+++++++-.+ ..++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhe
Confidence 4789999975 7999999999999998 9999999999998887643 2344555440 11225555554333 5889
Q ss_pred EEEecCC
Q 025101 146 CFECVGL 152 (258)
Q Consensus 146 v~d~~g~ 152 (258)
++++.|-
T Consensus 82 liNNAGI 88 (245)
T COG3967 82 LINNAGI 88 (245)
T ss_pred eeecccc
Confidence 9988875
No 160
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.73 E-value=0.0015 Score=53.28 Aligned_cols=113 Identities=10% Similarity=0.061 Sum_probs=75.3
Q ss_pred hhhhhhhhhhhhcC---CCCCCEEEEEcc-CHHHHHHHHHHH-HcCCCeEEEEcCCcchHHHHHhcCC-ceEEcCCCCCC
Q 025101 55 GVSTGVGAAWRTAN---VEVGSTVVIFGL-GSIGLAVAEGAR-LCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGD 128 (258)
Q Consensus 55 ~~~ta~~~l~~~~~---~~~g~~vlI~G~-g~~G~~a~~l~~-~~g~~~v~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~ 128 (258)
.+.|.|.. .+... .-..+.|+|..+ +-+++.++..++ ..+.-+++.++ |+...++.+.+|+ +.++.|++
T Consensus 117 Lf~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve~lg~Yd~V~~Yd~--- 191 (314)
T PF11017_consen 117 LFITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVESLGCYDEVLTYDD--- 191 (314)
T ss_pred HHHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhhccCCceEEeehhh---
Confidence 55666653 22221 223457777766 788888888887 44444889887 6677789999995 67887765
Q ss_pred ccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCC
Q 025101 129 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 178 (258)
Q Consensus 129 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 178 (258)
|..+....--+++|..|+......+...+...=-..+.+|....
T Consensus 192 ------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~ 235 (314)
T PF11017_consen 192 ------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHW 235 (314)
T ss_pred ------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence 44443334557779999999777888888764134566775543
No 161
>PRK04148 hypothetical protein; Provisional
Probab=97.72 E-value=0.0011 Score=47.08 Aligned_cols=89 Identities=18% Similarity=0.242 Sum_probs=61.7
Q ss_pred CCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEE
Q 025101 68 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF 147 (258)
Q Consensus 68 ~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~ 147 (258)
...++.+++++|.| .|...+..+...|. .|++++.+++..+.+++.+.+.+.+.--.++.++.+ ++|+++
T Consensus 13 ~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~--------~a~liy 82 (134)
T PRK04148 13 EKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYK--------NAKLIY 82 (134)
T ss_pred ccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHh--------cCCEEE
Confidence 33467899999999 78766666667898 999999999999989888865443322111122221 799999
Q ss_pred EecCChhhHHHHHHhhhcC
Q 025101 148 ECVGLASLVQEAYACCRKG 166 (258)
Q Consensus 148 d~~g~~~~~~~~~~~l~~~ 166 (258)
..-..++....+++..+.-
T Consensus 83 sirpp~el~~~~~~la~~~ 101 (134)
T PRK04148 83 SIRPPRDLQPFILELAKKI 101 (134)
T ss_pred EeCCCHHHHHHHHHHHHHc
Confidence 9988888444555555544
No 162
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.0004 Score=56.46 Aligned_cols=79 Identities=18% Similarity=0.277 Sum_probs=55.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceE-EcCCCCCCccHH---HHHHHhcCCCCCE
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVS---QIIIDMTDGGADY 145 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~---~~i~~~~~~~~d~ 145 (258)
.+++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ .+++. +.+.+..++.+|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCCCccE
Confidence 4678999987 9999999998888899 89999999888877766665422 34443 12222 2222333347999
Q ss_pred EEEecCC
Q 025101 146 CFECVGL 152 (258)
Q Consensus 146 v~d~~g~ 152 (258)
+|++.|.
T Consensus 80 li~~Ag~ 86 (277)
T PRK05993 80 LFNNGAY 86 (277)
T ss_pred EEECCCc
Confidence 9998763
No 163
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.67 E-value=0.00078 Score=54.23 Aligned_cols=111 Identities=23% Similarity=0.304 Sum_probs=70.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCce-E----EcCCCCCCccHHHHHHHhc-
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F----VNSKNCGDKSVSQIIIDMT- 139 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-v----i~~~~~~~~~~~~~i~~~~- 139 (258)
.|+.|+|+|+ +++|.+++.-....|+ +++.+.+..++++.+ ++.+... + .|-.+ .++..+.+.+..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~--~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD--EESVKKFVEWAIR 87 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC--HHHHHHHHHHHHH
Confidence 5789999998 7999887777777899 788888888877665 3444322 2 12222 123333332221
Q ss_pred -CCCCCEEEEecCChh-------------------------hHHHHHHhhhcCC-ceEEEecccCCCCceee
Q 025101 140 -DGGADYCFECVGLAS-------------------------LVQEAYACCRKGW-GKTIVLGVDQPGSQLSL 184 (258)
Q Consensus 140 -~~~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~ 184 (258)
-|++|+.+++.|-.. ....++..+++.+ |+++.+++..+....++
T Consensus 88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~ 159 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF 159 (282)
T ss_pred hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence 237999999887521 2345666666543 99999987776544443
No 164
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=97.66 E-value=0.00077 Score=52.23 Aligned_cols=107 Identities=20% Similarity=0.251 Sum_probs=74.3
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHHh----cCCceEEcCCCCCCccHHHHHHHhc
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT 139 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g-~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~ 139 (258)
...+....++||-+|.+ +|..++++|..+. -.+++.+++++++.+.+++ .|.+..+.... . .+..+.+.+..
T Consensus 53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~-~-gdal~~l~~~~ 129 (219)
T COG4122 53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL-G-GDALDVLSRLL 129 (219)
T ss_pred HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe-c-CcHHHHHHhcc
Confidence 34555678999999975 4888889998776 3389999999999887754 67554222111 0 14555555533
Q ss_pred CCCCCEEE-EecC--ChhhHHHHHHhhhcCCceEEEecc
Q 025101 140 DGGADYCF-ECVG--LASLVQEAYACCRKGWGKTIVLGV 175 (258)
Q Consensus 140 ~~~~d~v~-d~~g--~~~~~~~~~~~l~~~~G~~v~~g~ 175 (258)
.+.||.|| |+-- .+..++.+++.++++ |.++.=..
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNv 167 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNV 167 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeec
Confidence 34899998 6553 355699999999998 98875543
No 165
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.65 E-value=0.00016 Score=50.10 Aligned_cols=92 Identities=24% Similarity=0.331 Sum_probs=62.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHH-cCCCeEEEEcCCcchHHHHHh-c---CC-ceE-EcCCCCCCccHHHHHHHhcCCCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKR-F---GV-TEF-VNSKNCGDKSVSQIIIDMTDGGA 143 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~-~g~~~v~~~~~~~~~~~~~~~-~---g~-~~v-i~~~~~~~~~~~~~i~~~~~~~~ 143 (258)
||.+||-+|+|. |..++.+++. .++ +|++++.+++..+.+++ . +. +++ +-.. ++ . ......++|
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-----d~-~-~~~~~~~~~ 71 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG-----DA-E-FDPDFLEPF 71 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-----CC-H-GGTTTSSCE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-----cc-c-cCcccCCCC
Confidence 688999999975 8888888884 677 99999999998888765 2 22 222 2222 22 1 111112279
Q ss_pred CEEEEec-CC---h------hhHHHHHHhhhcCCceEEE
Q 025101 144 DYCFECV-GL---A------SLVQEAYACCRKGWGKTIV 172 (258)
Q Consensus 144 d~v~d~~-g~---~------~~~~~~~~~l~~~~G~~v~ 172 (258)
|+|+... .. . ..++.+.+.|+|+ |+++.
T Consensus 72 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi 109 (112)
T PF12847_consen 72 DLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI 109 (112)
T ss_dssp EEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred CEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence 9999766 21 1 1377889999999 99875
No 166
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.64 E-value=0.00051 Score=53.24 Aligned_cols=100 Identities=14% Similarity=0.160 Sum_probs=67.0
Q ss_pred hhhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHHh----cCCc---eEEcCCCCCCccHHHHH
Q 025101 64 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQII 135 (258)
Q Consensus 64 ~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g-~~~v~~~~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~i 135 (258)
.+...++++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++ .+.. .++..+ ..+.+
T Consensus 65 ~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d------~~~~~ 137 (205)
T PRK13944 65 CELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD------GKRGL 137 (205)
T ss_pred HHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC------cccCC
Confidence 4566788999999999874 878888887764 2289999999887666543 4432 222221 11111
Q ss_pred HHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEe
Q 025101 136 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 136 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 173 (258)
.. .+.||.|+-+.......+...+.|+++ |+++..
T Consensus 138 ~~--~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 138 EK--HAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred cc--CCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 11 127999996665555467788999999 998764
No 167
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.63 E-value=0.00084 Score=50.80 Aligned_cols=89 Identities=30% Similarity=0.391 Sum_probs=62.1
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEe
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 149 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~ 149 (258)
-.|.+|.|+|.|.+|+.++++++.+|. +|++.+++....+.....+.. . .++.+.+. ..|+|+.+
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~-~--------~~l~ell~-----~aDiv~~~ 98 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE-Y--------VSLDELLA-----QADIVSLH 98 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE-E--------SSHHHHHH-----H-SEEEE-
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce-e--------eehhhhcc-----hhhhhhhh
Confidence 368999999999999999999999999 999999998776645555541 1 23444343 48999987
Q ss_pred cCC-hh----hHHHHHHhhhcCCceEEEec
Q 025101 150 VGL-AS----LVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 150 ~g~-~~----~~~~~~~~l~~~~G~~v~~g 174 (258)
... +. .-...+..++++ ..+|.++
T Consensus 99 ~plt~~T~~li~~~~l~~mk~g-a~lvN~a 127 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPG-AVLVNVA 127 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTT-EEEEESS
T ss_pred hccccccceeeeeeeeeccccc-eEEEecc
Confidence 763 21 123667778887 7777665
No 168
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.59 E-value=0.00057 Score=53.26 Aligned_cols=99 Identities=17% Similarity=0.288 Sum_probs=68.2
Q ss_pred hhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHh----cCCce--EEcCCCCCCccHHHHHH
Q 025101 64 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIII 136 (258)
Q Consensus 64 ~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~i~ 136 (258)
.....+++|++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++ .|..+ ++..+- ..
T Consensus 69 ~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~------~~--- 138 (212)
T PRK13942 69 CELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG------TL--- 138 (212)
T ss_pred HHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc------cc---
Confidence 4567789999999999874 7788888887653 389999999988776654 44332 222211 00
Q ss_pred HhcC-CCCCEEEEecCChhhHHHHHHhhhcCCceEEEe
Q 025101 137 DMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 137 ~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 173 (258)
.... +.||+|+-+...........+.|+++ |+++..
T Consensus 139 ~~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 139 GYEENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred CCCcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 1112 27999986555555567888999999 998764
No 169
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=97.58 E-value=0.00061 Score=53.40 Aligned_cols=103 Identities=21% Similarity=0.269 Sum_probs=75.3
Q ss_pred hhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHh----cCCceEEcCCCCCCccHHHHHHHh
Q 025101 64 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM 138 (258)
Q Consensus 64 ~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~ 138 (258)
....++.+|++|+-.|.|+ |.++..|++..|. .+|+..+..++..+.+++ +|....+.... .|..+ .
T Consensus 87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~Dv~~----~ 158 (256)
T COG2519 87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GDVRE----G 158 (256)
T ss_pred HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---ccccc----c
Confidence 4567889999999998874 8899999997764 599999999988887754 45333222222 22222 2
Q ss_pred cCC-CCCEEE-EecCChhhHHHHHHhhhcCCceEEEecc
Q 025101 139 TDG-GADYCF-ECVGLASLVQEAYACCRKGWGKTIVLGV 175 (258)
Q Consensus 139 ~~~-~~d~v~-d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 175 (258)
..+ .+|.|| |.--....++.+.+.|.|+ |.++.+..
T Consensus 159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P 196 (256)
T COG2519 159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP 196 (256)
T ss_pred ccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence 222 799987 7776777899999999999 99998863
No 170
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.58 E-value=0.00014 Score=56.35 Aligned_cols=110 Identities=20% Similarity=0.269 Sum_probs=70.0
Q ss_pred cchhhhhhhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC-eEEEEcCCcchHHHHH----hcCCceE-EcCCC
Q 025101 52 LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGK----RFGVTEF-VNSKN 125 (258)
Q Consensus 52 ~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~-~v~~~~~~~~~~~~~~----~~g~~~v-i~~~~ 125 (258)
+..+...|. +.+...+++|++||-+|+|. |..++-+++..|.. +|+.+++.++-.+.++ ++|.+++ +...+
T Consensus 55 is~P~~~a~--~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd 131 (209)
T PF01135_consen 55 ISAPSMVAR--MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD 131 (209)
T ss_dssp E--HHHHHH--HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-
T ss_pred chHHHHHHH--HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc
Confidence 333444443 34677899999999999974 88888888887743 6899998887555543 4565432 22212
Q ss_pred CCCccHHHHHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEEe
Q 025101 126 CGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 126 ~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 173 (258)
-. ..+... .||.|+-+.+-+..-...++.|+++ |+++..
T Consensus 132 -----g~---~g~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 132 -----GS---EGWPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp -----GG---GTTGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred -----hh---hccccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 11 111222 7999998877766557888999999 999874
No 171
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.00044 Score=56.02 Aligned_cols=77 Identities=21% Similarity=0.346 Sum_probs=53.9
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceE-EcCCCCCCccHHHHHHHhcC--CCCCEEEE
Q 025101 73 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTD--GGADYCFE 148 (258)
Q Consensus 73 ~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~i~~~~~--~~~d~v~d 148 (258)
+++||+|+ |++|..+++.+...|+ +|+++++++++.+.+...+...+ .|..+ .+++.+.+..... +++|++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence 47899987 8999999999988899 89999998887776666554322 35444 1233333333322 27999999
Q ss_pred ecCC
Q 025101 149 CVGL 152 (258)
Q Consensus 149 ~~g~ 152 (258)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 8873
No 172
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.55 E-value=0.0031 Score=47.71 Aligned_cols=94 Identities=18% Similarity=0.240 Sum_probs=63.2
Q ss_pred EEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCC-
Q 025101 75 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL- 152 (258)
Q Consensus 75 vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~- 152 (258)
|+|+|+ |.+|..+++.+...|. +|++++|++++.+. ..+++ ++..+- .+. +.+.+... ++|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~---~d~-~~~~~al~-~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDL---FDP-DSVKAALK-GADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCT---TCH-HHHHHHHT-TSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeee---hhh-hhhhhhhh-hcchhhhhhhhh
Confidence 789997 9999999999999998 99999999998777 44443 332222 222 23333333 79999999984
Q ss_pred ---hhhHHHHHHhhhcC-CceEEEecccC
Q 025101 153 ---ASLVQEAYACCRKG-WGKTIVLGVDQ 177 (258)
Q Consensus 153 ---~~~~~~~~~~l~~~-~G~~v~~g~~~ 177 (258)
.......++.++.. -.+++.++...
T Consensus 72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 72 PKDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp TTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred cccccccccccccccccccccceeeeccc
Confidence 22355666666544 13677766443
No 173
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.52 E-value=0.0015 Score=44.58 Aligned_cols=94 Identities=20% Similarity=0.283 Sum_probs=60.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEec
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 150 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~ 150 (258)
+|.+|||+|+|.+|..-++.+...|+ +|++++... +..+ +--... . ..+. +.. .++++||-++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~-----~~~~----~~l-~~~~lV~~at 68 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-R-----REFE----EDL-DGADLVFAAT 68 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-E-----SS-G----GGC-TTESEEEE-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-h-----hhHH----HHH-hhheEEEecC
Confidence 57899999999999999999999999 999998775 2222 211121 1 1221 111 1799999999
Q ss_pred CChhhHHHHHHhhhcCCceEEEecccCCCCce
Q 025101 151 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 182 (258)
Q Consensus 151 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 182 (258)
+.+..-+......+.. |..+.....+....+
T Consensus 69 ~d~~~n~~i~~~a~~~-~i~vn~~D~p~~~dF 99 (103)
T PF13241_consen 69 DDPELNEAIYADARAR-GILVNVVDDPELCDF 99 (103)
T ss_dssp S-HHHHHHHHHHHHHT-TSEEEETT-CCCCSE
T ss_pred CCHHHHHHHHHHHhhC-CEEEEECCCcCCCeE
Confidence 9988555666666667 888887765544443
No 174
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.51 E-value=0.00038 Score=52.16 Aligned_cols=105 Identities=20% Similarity=0.200 Sum_probs=67.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceE-EcCCCC-C------------CccHHHHHH
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNC-G------------DKSVSQIII 136 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~-~------------~~~~~~~i~ 136 (258)
+..+|+|+|+|.+|+-|+++++.+|+ +|++.+...++.+..+..+...+ +++.+. . ++.....+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 34789999999999999999999999 99999999988888888776433 221110 0 122223333
Q ss_pred HhcCCCCCEEEEecC--C---h-hhHHHHHHhhhcCCceEEEecccCC
Q 025101 137 DMTDGGADYCFECVG--L---A-SLVQEAYACCRKGWGKTIVLGVDQP 178 (258)
Q Consensus 137 ~~~~~~~d~v~d~~g--~---~-~~~~~~~~~l~~~~G~~v~~g~~~~ 178 (258)
+... .+|+|+-+.- . + ..-...++.++++ ..++.+....+
T Consensus 98 ~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~g 143 (168)
T PF01262_consen 98 EFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQG 143 (168)
T ss_dssp HHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGGT
T ss_pred HHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecCC
Confidence 3222 4899885431 1 1 1235778888988 88888875443
No 175
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.51 E-value=0.0022 Score=45.01 Aligned_cols=100 Identities=22% Similarity=0.328 Sum_probs=66.9
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc--eEEcCCCCCCccHHHHHHHh
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIIIDM 138 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~--~vi~~~~~~~~~~~~~i~~~ 138 (258)
....+.++++++-+|+|. |..+..+++..+..+|++++.++...+.+++ ++.. .++..+- ... ...
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~~~---~~~- 84 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---PEA---LED- 84 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---ccc---Chh-
Confidence 445667788999999976 8889999987654489999999988777643 4432 2222111 110 111
Q ss_pred cCCCCCEEEEecCC---hhhHHHHHHhhhcCCceEEEe
Q 025101 139 TDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 139 ~~~~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~ 173 (258)
..+.+|+|+-..+. ...++.+.+.++++ |.++.-
T Consensus 85 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~ 121 (124)
T TIGR02469 85 SLPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLN 121 (124)
T ss_pred hcCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEE
Confidence 11279999965433 23588899999999 998754
No 176
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=97.50 E-value=0.0012 Score=50.35 Aligned_cols=96 Identities=19% Similarity=0.238 Sum_probs=62.6
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCceEEcCCCCCCccHHHHHHHhcCCCCC
Q 025101 69 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDGGAD 144 (258)
Q Consensus 69 ~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d 144 (258)
++++.+||-+|+|. |..++.+++.....+|++++.+++..+.+++ .+.+. +.... .+..+ +.. .+.+|
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~---~d~~~-~~~--~~~fD 114 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVH---GRAEE-FGQ--EEKFD 114 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEe---ccHhh-CCC--CCCcc
Confidence 44589999999874 6777777765543399999999987766643 55433 22222 22221 111 23799
Q ss_pred EEEEe-cCC-hhhHHHHHHhhhcCCceEEEe
Q 025101 145 YCFEC-VGL-ASLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 145 ~v~d~-~g~-~~~~~~~~~~l~~~~G~~v~~ 173 (258)
+|+-. .+. +..+..+.+.++|+ |+++.+
T Consensus 115 lV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~ 144 (187)
T PRK00107 115 VVTSRAVASLSDLVELCLPLLKPG-GRFLAL 144 (187)
T ss_pred EEEEccccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 99953 332 34577889999999 999877
No 177
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.50 E-value=0.0011 Score=53.34 Aligned_cols=105 Identities=20% Similarity=0.354 Sum_probs=76.1
Q ss_pred hhhhhhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc---eE--EcCCCCCCc
Q 025101 59 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EF--VNSKNCGDK 129 (258)
Q Consensus 59 a~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~---~v--i~~~~~~~~ 129 (258)
++..+.+.+++++|++||=+|+|- |.+++.+|+..|. +|++++-|++..+.+++ .|.. .+ -|+++
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd---- 133 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD---- 133 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc----
Confidence 444456889999999999999986 8888999999899 99999999998877654 5533 12 12222
Q ss_pred cHHHHHHHhcCCCCCEEE-----EecCC---hhhHHHHHHhhhcCCceEEEecccCCC
Q 025101 130 SVSQIIIDMTDGGADYCF-----ECVGL---ASLVQEAYACCRKGWGKTIVLGVDQPG 179 (258)
Q Consensus 130 ~~~~~i~~~~~~~~d~v~-----d~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~ 179 (258)
.. +.||.|+ +.+|. +.-+..+.+.|+|+ |++++-......
T Consensus 134 --------~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~ 181 (283)
T COG2230 134 --------FE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD 181 (283)
T ss_pred --------cc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence 11 1477775 35554 34478889999999 999877755544
No 178
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.00055 Score=57.13 Aligned_cols=78 Identities=24% Similarity=0.323 Sum_probs=53.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCce-E--EcCCCCCCccHHHHHH-Hhc--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIII-DMT-- 139 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~i~-~~~-- 139 (258)
+++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++.|... + .|..+ .+..+.+. +..
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d---~~~v~~~~~~~~~~ 81 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD---ADQVKALATQAASF 81 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC---HHHHHHHHHHHHHh
Confidence 5689999997 8999999999999999 899999998876543 3345432 2 23333 33332222 211
Q ss_pred CCCCCEEEEecCC
Q 025101 140 DGGADYCFECVGL 152 (258)
Q Consensus 140 ~~~~d~v~d~~g~ 152 (258)
.+++|++|++.|.
T Consensus 82 ~g~iD~lVnnAG~ 94 (330)
T PRK06139 82 GGRIDVWVNNVGV 94 (330)
T ss_pred cCCCCEEEECCCc
Confidence 1379999999874
No 179
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.49 E-value=0.00085 Score=54.27 Aligned_cols=99 Identities=19% Similarity=0.284 Sum_probs=61.6
Q ss_pred hhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc--eEEcCCCCCCccHHHHHH
Q 025101 63 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT--EFVNSKNCGDKSVSQIII 136 (258)
Q Consensus 63 l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~--~vi~~~~~~~~~~~~~i~ 136 (258)
+.+.+++++|++||-+|+| -|..+..+++..|+ +|++++.|++..++++ +.|.. ..+... ++ +
T Consensus 54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-----D~----~ 122 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-----DY----R 122 (273)
T ss_dssp HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES------G----G
T ss_pred HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-----ec----c
Confidence 4578899999999999997 47788889988899 9999999999888764 35532 112111 11 1
Q ss_pred HhcCCCCCEEEE-----ecCC---hhhHHHHHHhhhcCCceEEEec
Q 025101 137 DMTDGGADYCFE-----CVGL---ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 137 ~~~~~~~d~v~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~g 174 (258)
+.. +.||.|+. .+|. +.-+..+.+.|+|+ |++++-.
T Consensus 123 ~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~ 166 (273)
T PF02353_consen 123 DLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQT 166 (273)
T ss_dssp G----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEE
T ss_pred ccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEe
Confidence 221 17999865 4443 23478889999999 9987543
No 180
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.00097 Score=52.35 Aligned_cols=76 Identities=12% Similarity=0.148 Sum_probs=51.7
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCce--EEcCCCCCCccHHHHHHH-hcCCCCCEEEE
Q 025101 73 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE--FVNSKNCGDKSVSQIIID-MTDGGADYCFE 148 (258)
Q Consensus 73 ~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~~~i~~-~~~~~~d~v~d 148 (258)
++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+++++... ..|-.+ .+..+.+.+ +..+++|++|.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d---~~~~~~~~~~~~~~~id~vi~ 77 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND---PASLDQLLQRLQGQRFDLLFV 77 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC---HHHHHHHHHHhhcCCCCEEEE
Confidence 47899986 9999999888888899 9999999988776665544222 233333 333333333 33337999998
Q ss_pred ecCC
Q 025101 149 CVGL 152 (258)
Q Consensus 149 ~~g~ 152 (258)
+.|.
T Consensus 78 ~ag~ 81 (225)
T PRK08177 78 NAGI 81 (225)
T ss_pred cCcc
Confidence 7754
No 181
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.47 E-value=0.0023 Score=56.61 Aligned_cols=105 Identities=12% Similarity=0.109 Sum_probs=66.4
Q ss_pred hhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh---------cCC-----ceE--EcCCCCC
Q 025101 65 RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---------FGV-----TEF--VNSKNCG 127 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~---------~g~-----~~v--i~~~~~~ 127 (258)
...+.+.|+++||+|+ |.+|..+++.+...|+ +|++++|+.++.+.+.+ .|. ..+ .|..+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD-- 149 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK-- 149 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC--
Confidence 3455678999999987 9999999998888899 89999999887654321 121 012 23322
Q ss_pred CccHHHHHHHhcCCCCCEEEEecCChh---------------hHHHHHHhhhcC-CceEEEecccC
Q 025101 128 DKSVSQIIIDMTDGGADYCFECVGLAS---------------LVQEAYACCRKG-WGKTIVLGVDQ 177 (258)
Q Consensus 128 ~~~~~~~i~~~~~~~~d~v~d~~g~~~---------------~~~~~~~~l~~~-~G~~v~~g~~~ 177 (258)
. +.+.+..+ ++|+||.+.|... ....+++.+... .++||.++...
T Consensus 150 -~---esI~~aLg-giDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 150 -P---DQIGPALG-NASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred -H---HHHHHHhc-CCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 2 22333332 6999999987531 122334444332 26899888654
No 182
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.47 E-value=0.00074 Score=59.47 Aligned_cols=75 Identities=23% Similarity=0.236 Sum_probs=55.7
Q ss_pred CCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEE
Q 025101 68 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF 147 (258)
Q Consensus 68 ~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~ 147 (258)
.+.+|++|+|+|.|.+|++++++++..|+ +|++.+..+++.+.++++|+. ++.... ..+.+. .+|+|+
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~-~~~~~~-----~~~~l~-----~~D~VV 75 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVA-TVSTSD-----AVQQIA-----DYALVV 75 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCE-EEcCcc-----hHhHhh-----cCCEEE
Confidence 35578999999999999999999999999 899999776666667778874 332221 112221 589999
Q ss_pred EecCChh
Q 025101 148 ECVGLAS 154 (258)
Q Consensus 148 d~~g~~~ 154 (258)
.+.|-+.
T Consensus 76 ~SpGi~~ 82 (488)
T PRK03369 76 TSPGFRP 82 (488)
T ss_pred ECCCCCC
Confidence 9888643
No 183
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.0028 Score=53.04 Aligned_cols=78 Identities=19% Similarity=0.155 Sum_probs=52.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCce---EEcCCCCCCccHHHHH-HHhcC-
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE---FVNSKNCGDKSVSQII-IDMTD- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~~~~i-~~~~~- 140 (258)
++++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++.|... ..|..+ .+-.+.+ .....
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d---~~~v~~~~~~~~~~ 82 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD---AEAVQAAADRAEEE 82 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC---HHHHHHHHHHHHHH
Confidence 4679999987 8999999998888999 899999988776543 3345432 124333 3322222 22211
Q ss_pred -CCCCEEEEecCC
Q 025101 141 -GGADYCFECVGL 152 (258)
Q Consensus 141 -~~~d~v~d~~g~ 152 (258)
+.+|++|++.|.
T Consensus 83 ~g~iD~lInnAg~ 95 (334)
T PRK07109 83 LGPIDTWVNNAMV 95 (334)
T ss_pred CCCCCEEEECCCc
Confidence 379999998874
No 184
>PRK06182 short chain dehydrogenase; Validated
Probab=97.45 E-value=0.00083 Score=54.41 Aligned_cols=79 Identities=19% Similarity=0.258 Sum_probs=54.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCce-EEcCCCCCCccHHHHHHHhc--CCCCCEE
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMT--DGGADYC 146 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~i~~~~--~~~~d~v 146 (258)
++++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+.+.+... ..|..+ .+++.+.+.+.. .+++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEE
Confidence 3678999987 8999999999888899 9999999988776655545432 234443 123333333322 2379999
Q ss_pred EEecCC
Q 025101 147 FECVGL 152 (258)
Q Consensus 147 ~d~~g~ 152 (258)
|++.|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 998874
No 185
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.44 E-value=0.0021 Score=47.96 Aligned_cols=98 Identities=19% Similarity=0.229 Sum_probs=64.7
Q ss_pred hhhcchhhhhhhhhhhhhcCCCCCCEEEEEccCH-HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCC
Q 025101 49 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 127 (258)
Q Consensus 49 aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~-~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 127 (258)
....|+....+...+.+...--.|.+|+|+|+|. +|..++..++..|+ +|+++.++.
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~--------------------- 78 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKT--------------------- 78 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCc---------------------
Confidence 3445554444444333333345789999999986 59989999999999 788777542
Q ss_pred CccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccC
Q 025101 128 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 177 (258)
Q Consensus 128 ~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 177 (258)
+++.+.+. .+|+||.+++.+..+.. ..++++ -.++.++...
T Consensus 79 -~~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr 119 (168)
T cd01080 79 -KNLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR 119 (168)
T ss_pred -hhHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence 12333332 59999999998774333 346666 6777777543
No 186
>PRK12742 oxidoreductase; Provisional
Probab=97.44 E-value=0.0037 Score=49.33 Aligned_cols=77 Identities=21% Similarity=0.264 Sum_probs=49.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcC-CcchHHHH-HhcCCceE-EcCCCCCCccHHHHHHHhcCCCCCEE
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG-KRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYC 146 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~-~~~~~~~~-~~~g~~~v-i~~~~~~~~~~~~~i~~~~~~~~d~v 146 (258)
+++++||+|+ |++|..+++.+...|+ +|+.+.+ ++++.+.+ .+.+...+ .|..+ .+.+.+.+.+ . +++|++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~-~-~~id~l 79 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRK-S-GALDIL 79 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHH-h-CCCcEE
Confidence 4789999987 8999999999998999 7877654 44444433 44554322 23322 1222233322 1 369999
Q ss_pred EEecCC
Q 025101 147 FECVGL 152 (258)
Q Consensus 147 ~d~~g~ 152 (258)
|++.|.
T Consensus 80 i~~ag~ 85 (237)
T PRK12742 80 VVNAGI 85 (237)
T ss_pred EECCCC
Confidence 998874
No 187
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=97.44 E-value=0.0025 Score=51.69 Aligned_cols=99 Identities=24% Similarity=0.362 Sum_probs=65.5
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCceEEcCCCCCCccHHHHHHHhcCCCCC
Q 025101 69 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDGGAD 144 (258)
Q Consensus 69 ~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d 144 (258)
+++|+++|=.|+|+ |.+++..++ +|+.+|++++.++...+.+++ .+....+ ... ..........+.+|
T Consensus 160 ~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~-~~~-----~~~~~~~~~~~~~D 231 (300)
T COG2264 160 LKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVELLV-QAK-----GFLLLEVPENGPFD 231 (300)
T ss_pred hcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCchhh-hcc-----cccchhhcccCccc
Confidence 46899999999974 778877776 588789999999877766654 3443211 111 00011112223799
Q ss_pred EEEEecCCh---hhHHHHHHhhhcCCceEEEeccc
Q 025101 145 YCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD 176 (258)
Q Consensus 145 ~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~ 176 (258)
+|+-++=.. ...+.....++|+ |.+++.|..
T Consensus 232 vIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl 265 (300)
T COG2264 232 VIVANILAEVLVELAPDIKRLLKPG-GRLILSGIL 265 (300)
T ss_pred EEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeeh
Confidence 999766432 2356788889999 999999854
No 188
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.40 E-value=0.003 Score=46.67 Aligned_cols=82 Identities=20% Similarity=0.188 Sum_probs=55.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEec
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 150 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~ 150 (258)
.|.+|+|.|+|.+|..-++.+...|+ +|++++ ++..+.+++++.-. +..+.+...+ + .++|+||-++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~~~~~d-------l--~~a~lViaaT 78 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKTFSNDD-------I--KDAHLIYAAT 78 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecccChhc-------C--CCceEEEECC
Confidence 68999999999999998888888899 888874 44444455554211 2222210011 1 1799999999
Q ss_pred CChhhHHHHHHhhhcC
Q 025101 151 GLASLVQEAYACCRKG 166 (258)
Q Consensus 151 g~~~~~~~~~~~l~~~ 166 (258)
++.. ++..+...+..
T Consensus 79 ~d~e-~N~~i~~~a~~ 93 (157)
T PRK06719 79 NQHA-VNMMVKQAAHD 93 (157)
T ss_pred CCHH-HHHHHHHHHHH
Confidence 9988 66666665544
No 189
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.40 E-value=0.0011 Score=56.72 Aligned_cols=75 Identities=19% Similarity=0.173 Sum_probs=54.6
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEE
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 148 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d 148 (258)
-++.+++|+|+|.+|.+++..+...|+.+++++.|+.++.+.+ .+++...++... ++.+.+ . .+|+||+
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~-----~l~~~l----~-~aDiVI~ 248 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS-----ELPQLI----K-KADIIIA 248 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH-----HHHHHh----c-cCCEEEE
Confidence 4678999999999999999999999987899999998775544 456522233221 122222 1 5999999
Q ss_pred ecCChh
Q 025101 149 CVGLAS 154 (258)
Q Consensus 149 ~~g~~~ 154 (258)
|++.+.
T Consensus 249 aT~a~~ 254 (414)
T PRK13940 249 AVNVLE 254 (414)
T ss_pred CcCCCC
Confidence 999876
No 190
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0034 Score=49.91 Aligned_cols=78 Identities=22% Similarity=0.265 Sum_probs=51.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCce-E--EcCCCCCCccHHH---HHHHhcCCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE-F--VNSKNCGDKSVSQ---IIIDMTDGG 142 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~-v--i~~~~~~~~~~~~---~i~~~~~~~ 142 (258)
++++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++... . .|..+ .++... .+.+.. ++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~-~~ 80 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD--VAAQKALAQALAEAF-GR 80 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHh-CC
Confidence 4679999987 8999999999988999 899999887665443 4455432 2 23222 122222 222222 36
Q ss_pred CCEEEEecCC
Q 025101 143 ADYCFECVGL 152 (258)
Q Consensus 143 ~d~v~d~~g~ 152 (258)
+|++|.+.|.
T Consensus 81 id~vi~~ag~ 90 (249)
T PRK06500 81 LDAVFINAGV 90 (249)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 191
>PRK08017 oxidoreductase; Provisional
Probab=97.38 E-value=0.00076 Score=53.95 Aligned_cols=77 Identities=23% Similarity=0.325 Sum_probs=54.3
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceE-EcCCCCCCccH---HHHHHHhcCCCCCEEE
Q 025101 73 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSV---SQIIIDMTDGGADYCF 147 (258)
Q Consensus 73 ~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~---~~~i~~~~~~~~d~v~ 147 (258)
++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+++.++..+ .|..+ .+++ .+.+.....+.+|.++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~~~~~ii 79 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDNRLYGLF 79 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCCCCeEEE
Confidence 57999997 9999999999998899 89999999988887777775432 34333 1122 2233333334788888
Q ss_pred EecCC
Q 025101 148 ECVGL 152 (258)
Q Consensus 148 d~~g~ 152 (258)
.+.|.
T Consensus 80 ~~ag~ 84 (256)
T PRK08017 80 NNAGF 84 (256)
T ss_pred ECCCC
Confidence 87763
No 192
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=97.38 E-value=0.0017 Score=51.40 Aligned_cols=105 Identities=15% Similarity=0.211 Sum_probs=69.1
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHHh----cCCceEEcCCCCCCccHHHHHHHhc
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT 139 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g-~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~ 139 (258)
...+..++++||-+|+| +|..++.+++.++ ..+|+.++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~---gda~~~L~~l~ 137 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ---SDALSALDQLL 137 (234)
T ss_pred HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---ccHHHHHHHHH
Confidence 34556678899999986 3777777887653 3499999999988877654 45432222222 34444444442
Q ss_pred ----CCCCCEEE-Eec--CChhhHHHHHHhhhcCCceEEEec
Q 025101 140 ----DGGADYCF-ECV--GLASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 140 ----~~~~d~v~-d~~--g~~~~~~~~~~~l~~~~G~~v~~g 174 (258)
.+.||+|| |+- .....++.+++.++++ |.++.-.
T Consensus 138 ~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn 178 (234)
T PLN02781 138 NNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDN 178 (234)
T ss_pred hCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEc
Confidence 23799998 442 2244578889999999 9877543
No 193
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=97.37 E-value=0.00046 Score=54.68 Aligned_cols=106 Identities=18% Similarity=0.252 Sum_probs=68.3
Q ss_pred hhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHHh----cCCc-e-EEcCCCCCCccHHH-H
Q 025101 63 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVT-E-FVNSKNCGDKSVSQ-I 134 (258)
Q Consensus 63 l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g-~~~v~~~~~~~~~~~~~~~----~g~~-~-vi~~~~~~~~~~~~-~ 134 (258)
+....++.+|++|+-.|.|+ |.+...+++..| -.+|+..+..+++.+.+++ .|.. . .+..++ +.+ .
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D-----v~~~g 105 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD-----VCEEG 105 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES------GGCG-
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc-----eeccc
Confidence 44678899999999998764 778888888765 3399999999998877654 5543 2 232222 211 1
Q ss_pred HHHhcCCCCCEEE-EecCChhhHHHHHHhh-hcCCceEEEecc
Q 025101 135 IIDMTDGGADYCF-ECVGLASLVQEAYACC-RKGWGKTIVLGV 175 (258)
Q Consensus 135 i~~~~~~~~d~v~-d~~g~~~~~~~~~~~l-~~~~G~~v~~g~ 175 (258)
..+.....+|.|| |--.....+..+.+.| +++ |+++.+..
T Consensus 106 ~~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 106 FDEELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp -STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred ccccccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 1111122689987 7666666799999999 888 99988863
No 194
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0036 Score=50.33 Aligned_cols=79 Identities=22% Similarity=0.306 Sum_probs=52.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCc-eE--EcCCCCCCccHHHHHHHhcC--CCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGA 143 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~-~v--i~~~~~~~~~~~~~i~~~~~--~~~ 143 (258)
++++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++.. .+ .|..+ .+++.+.+.+... +.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4689999987 8999999999888999 999999988765544 444532 12 23333 1223333333221 269
Q ss_pred CEEEEecCC
Q 025101 144 DYCFECVGL 152 (258)
Q Consensus 144 d~v~d~~g~ 152 (258)
|++|.+.|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999998774
No 195
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.37 E-value=0.001 Score=53.67 Aligned_cols=99 Identities=18% Similarity=0.197 Sum_probs=72.0
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEec-
Q 025101 72 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV- 150 (258)
Q Consensus 72 g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~- 150 (258)
...|.|+|.|.+|.-++.+|..+|+ +|++.+.+.+|+..+..+-..++--... ++.++.+.+. +.|++|.++
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~s-t~~~iee~v~-----~aDlvIgaVL 240 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYS-TPSNIEEAVK-----KADLVIGAVL 240 (371)
T ss_pred CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEc-CHHHHHHHhh-----hccEEEEEEE
Confidence 4567888999999999999999999 9999999999999887743333211111 1134444443 589999865
Q ss_pred --CC---hhhHHHHHHhhhcCCceEEEecccCC
Q 025101 151 --GL---ASLVQEAYACCRKGWGKTIVLGVDQP 178 (258)
Q Consensus 151 --g~---~~~~~~~~~~l~~~~G~~v~~g~~~~ 178 (258)
|. ....++.++.++|+ +.++.+...++
T Consensus 241 IpgakaPkLvt~e~vk~MkpG-sVivDVAiDqG 272 (371)
T COG0686 241 IPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQG 272 (371)
T ss_pred ecCCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence 22 23467889999999 99999986554
No 196
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=97.37 E-value=0.0021 Score=50.23 Aligned_cols=100 Identities=18% Similarity=0.215 Sum_probs=66.3
Q ss_pred hhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHh----cCCce--EEcCCCCCCccHHHHHH
Q 025101 64 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIII 136 (258)
Q Consensus 64 ~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~i~ 136 (258)
.+...++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++ +|.++ ++.. +..+...
T Consensus 70 ~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~------d~~~~~~ 142 (215)
T TIGR00080 70 TELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG------DGTQGWE 142 (215)
T ss_pred HHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC------CcccCCc
Confidence 4566788999999999874 7777888887653 269999999887776643 45432 2211 1111110
Q ss_pred HhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEe
Q 025101 137 DMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 137 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 173 (258)
..+.||+|+-............+.|+++ |+++..
T Consensus 143 --~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 143 --PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred --ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 1127999885544444466788999999 998754
No 197
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=97.36 E-value=0.0018 Score=50.46 Aligned_cols=96 Identities=19% Similarity=0.248 Sum_probs=66.0
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCc--eEEcCCCCCCccHHHHHHHhcCCCCCEEE
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFVNSKNCGDKSVSQIIIDMTDGGADYCF 147 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~~~i~~~~~~~~d~v~ 147 (258)
-+|.+||=+|+|+ |++...+|+ .|+ +|+++|-+++..+.++..... .-+|+.. ...+.+... ++.||+|+
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~----~~~edl~~~-~~~FDvV~ 129 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ----ATVEDLASA-GGQFDVVT 129 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchh----hhHHHHHhc-CCCccEEE
Confidence 4789999999975 777777776 588 999999999999888753221 1255654 222223222 14899987
Q ss_pred E-----ecCChh-hHHHHHHhhhcCCceEEEec
Q 025101 148 E-----CVGLAS-LVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 148 d-----~~g~~~-~~~~~~~~l~~~~G~~v~~g 174 (258)
. -+..+. .+..+...++|+ |.++...
T Consensus 130 cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~ST 161 (243)
T COG2227 130 CMEVLEHVPDPESFLRACAKLVKPG-GILFLST 161 (243)
T ss_pred EhhHHHccCCHHHHHHHHHHHcCCC-cEEEEec
Confidence 4 455544 466888999999 9887554
No 198
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0045 Score=49.24 Aligned_cols=101 Identities=17% Similarity=0.179 Sum_probs=60.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcc-hHHH----HHhcCCc-eE--EcCCCCCCccHHHHHHHhcC-
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFEI----GKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~-~~~~----~~~~g~~-~v--i~~~~~~~~~~~~~i~~~~~- 140 (258)
+++++||+|+ |.+|..++..+...|+ +|+++.++.+ +.+. ++..+.. .. .|..+ .+++...+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREE 81 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence 4679999987 8999999998888899 8988887653 2322 2223322 11 23333 1223223332222
Q ss_pred -CCCCEEEEecCCh-------------------hhHHHHHHhhhcCCceEEEecc
Q 025101 141 -GGADYCFECVGLA-------------------SLVQEAYACCRKGWGKTIVLGV 175 (258)
Q Consensus 141 -~~~d~v~d~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~ 175 (258)
+++|+++.+.|.. ..++.+...+... |+++.++.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 2689999877542 1234444445556 88888865
No 199
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.36 E-value=0.0019 Score=53.44 Aligned_cols=91 Identities=25% Similarity=0.416 Sum_probs=61.8
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecC
Q 025101 73 STVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 151 (258)
Q Consensus 73 ~~vlI~G~g~~G~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g 151 (258)
.+|.|+|+|.+|.+.+..++..|. .+|+++++++++.+.+++.|....+. .+..+.+ ...|+||.|+.
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~-----~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV-----KGADLVILCVP 75 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh-----cCCCEEEECCC
Confidence 679999999999999998888774 37999999999888888887532111 1111112 16899999998
Q ss_pred Chhh---HHHHHHhhhcCCceEEEecc
Q 025101 152 LASL---VQEAYACCRKGWGKTIVLGV 175 (258)
Q Consensus 152 ~~~~---~~~~~~~l~~~~G~~v~~g~ 175 (258)
.... +......++++ ..++.+|.
T Consensus 76 ~~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 6542 23333445565 66666653
No 200
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.36 E-value=0.0012 Score=50.88 Aligned_cols=93 Identities=17% Similarity=0.015 Sum_probs=57.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcch-HHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEe
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 149 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~-~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~ 149 (258)
.|.+|||+|+|.+|...++.+...|+ +|++++....+ ...+.+.+. ..+..+. +.+. .+ .++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~-i~~~~~~-----~~~~--~l--~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGK-IRWKQKE-----FEPS--DI--VDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCC-EEEEecC-----CChh--hc--CCceEEEEc
Confidence 57899999999999999888888898 88888654321 122212221 1122222 1100 01 169999999
Q ss_pred cCChhhHHHHHHhhhcCCceEEEeccc
Q 025101 150 VGLASLVQEAYACCRKGWGKTIVLGVD 176 (258)
Q Consensus 150 ~g~~~~~~~~~~~l~~~~G~~v~~g~~ 176 (258)
++++. ++..+...... +.++.....
T Consensus 78 T~d~e-lN~~i~~~a~~-~~lvn~~d~ 102 (202)
T PRK06718 78 TNDPR-VNEQVKEDLPE-NALFNVITD 102 (202)
T ss_pred CCCHH-HHHHHHHHHHh-CCcEEECCC
Confidence 99988 66655555555 656555443
No 201
>PRK00536 speE spermidine synthase; Provisional
Probab=97.35 E-value=0.00084 Score=53.67 Aligned_cols=98 Identities=12% Similarity=-0.040 Sum_probs=67.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCC-ceEEcCCCCCCccHHHHHHHhcCCCCCEEE
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCF 147 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~-~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~ 147 (258)
...++|||+|+|- |.++-+++|+- - +|+.++-+++-.+.+++ ++. ...++..+ -++...+.+...+.||+||
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~-~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR---v~l~~~~~~~~~~~fDVII 144 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYD-T-HVDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLDIKKYDLII 144 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcC-C-eeEEEECCHHHHHHHHHHCHHHHHhhcCCC---EEEeehhhhccCCcCCEEE
Confidence 3458999998765 66778888875 3 89999999988899888 331 11233333 2222234443334799988
Q ss_pred -EecCChhhHHHHHHhhhcCCceEEEec
Q 025101 148 -ECVGLASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 148 -d~~g~~~~~~~~~~~l~~~~G~~v~~g 174 (258)
|++-.+.-.+.+.+.|+++ |.++.=+
T Consensus 145 vDs~~~~~fy~~~~~~L~~~-Gi~v~Qs 171 (262)
T PRK00536 145 CLQEPDIHKIDGLKRMLKED-GVFISVA 171 (262)
T ss_pred EcCCCChHHHHHHHHhcCCC-cEEEECC
Confidence 7676666577899999999 9887543
No 202
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0039 Score=49.19 Aligned_cols=79 Identities=19% Similarity=0.264 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCC---ceEE--cCCCCCCccHHHHHHHhcC--C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV---TEFV--NSKNCGDKSVSQIIIDMTD--G 141 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~---~~vi--~~~~~~~~~~~~~i~~~~~--~ 141 (258)
++.+++|+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +++.. -+++ |..+ .+++.+.+.+... +
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD--EADVQRAVDAIVAAFG 81 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence 4689999987 8999999888887899 899999988766543 33321 1222 3322 1233333333221 2
Q ss_pred CCCEEEEecCC
Q 025101 142 GADYCFECVGL 152 (258)
Q Consensus 142 ~~d~v~d~~g~ 152 (258)
++|++|.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (237)
T PRK07326 82 GLDVLIANAGV 92 (237)
T ss_pred CCCEEEECCCC
Confidence 69999998764
No 203
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0013 Score=52.58 Aligned_cols=80 Identities=15% Similarity=0.227 Sum_probs=52.6
Q ss_pred CCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCC-ceE--EcCCCCCCccHHHHHHHhc--
Q 025101 70 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEF--VNSKNCGDKSVSQIIIDMT-- 139 (258)
Q Consensus 70 ~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~-~~v--i~~~~~~~~~~~~~i~~~~-- 139 (258)
-.+++++|+|+ |.+|..++..+...|+ +|+++++++++.+.+.+ .+. ..+ .|..+ .+++.+.+.+..
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 83 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD--YQSIKAAVAHAETE 83 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHh
Confidence 35789999986 9999999999988999 89999998877654432 221 122 23322 123333333321
Q ss_pred CCCCCEEEEecCC
Q 025101 140 DGGADYCFECVGL 152 (258)
Q Consensus 140 ~~~~d~v~d~~g~ 152 (258)
.+.+|++|.+.|.
T Consensus 84 ~~~~d~li~~ag~ 96 (258)
T PRK06949 84 AGTIDILVNNSGV 96 (258)
T ss_pred cCCCCEEEECCCC
Confidence 1379999998873
No 204
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0013 Score=52.73 Aligned_cols=79 Identities=24% Similarity=0.323 Sum_probs=52.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCce-EEcCCCCCCccHHHHHHHhcC--CCCCE
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY 145 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~ 145 (258)
+|++++|+|+ |++|..+++.+...|+ +|+++++++.+.+.. .+++... ..|..+ .+++.+.+.+... +++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 5789999997 8999999999988999 899999887766544 3444321 224333 1222222222211 26899
Q ss_pred EEEecCC
Q 025101 146 CFECVGL 152 (258)
Q Consensus 146 v~d~~g~ 152 (258)
+|.+.|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998763
No 205
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=97.33 E-value=0.0056 Score=48.21 Aligned_cols=107 Identities=21% Similarity=0.346 Sum_probs=73.9
Q ss_pred hhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCceEEcCCCCCCccHHHHHHHhc
Q 025101 64 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT 139 (258)
Q Consensus 64 ~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~ 139 (258)
.......+|++||=.|+| +|-.+..+++..|..+|+++|.|++.++.+++ .|... +..-. .+. +.+. ..
T Consensus 44 i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~---~dA-e~LP-f~ 116 (238)
T COG2226 44 ISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV---GDA-ENLP-FP 116 (238)
T ss_pred HHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE---ech-hhCC-CC
Confidence 344556689999998887 49999999999986699999999999888765 23221 11111 111 1111 11
Q ss_pred CCCCCEEEEecCC------hhhHHHHHHhhhcCCceEEEecccCC
Q 025101 140 DGGADYCFECVGL------ASLVQEAYACCRKGWGKTIVLGVDQP 178 (258)
Q Consensus 140 ~~~~d~v~d~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~ 178 (258)
+..||+|.-+.|- +.++.++.+.++|+ |+++.+.....
T Consensus 117 D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p 160 (238)
T COG2226 117 DNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP 160 (238)
T ss_pred CCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence 2278998766553 44689999999999 99988875543
No 206
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.33 E-value=0.0014 Score=54.54 Aligned_cols=80 Identities=18% Similarity=0.170 Sum_probs=54.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-----cC-Cc---eEEcCCCCCCccHHHHHHHhcC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FG-VT---EFVNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-----~g-~~---~vi~~~~~~~~~~~~~i~~~~~ 140 (258)
.|++++|+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ .+ .. ...|..+ +..+..+.+.+..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence 5899999997 8999998888877899 89999999988665422 22 11 1234332 11344455555555
Q ss_pred C-CCCEEEEecCC
Q 025101 141 G-GADYCFECVGL 152 (258)
Q Consensus 141 ~-~~d~v~d~~g~ 152 (258)
+ ++|+++++.|.
T Consensus 130 ~~didilVnnAG~ 142 (320)
T PLN02780 130 GLDVGVLINNVGV 142 (320)
T ss_pred CCCccEEEEecCc
Confidence 5 67899998763
No 207
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.30 E-value=0.0037 Score=46.00 Aligned_cols=90 Identities=20% Similarity=0.318 Sum_probs=58.9
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEE
Q 025101 69 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 148 (258)
Q Consensus 69 ~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d 148 (258)
.-.|++++|.|-|.+|.-.++.++.+|+ +|++++.++-+.-.+.--|.. +. .+.+.+ ...|++|-
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~--------~~~~a~-----~~adi~vt 84 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM--------TLEEAL-----RDADIFVT 84 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE---------HHHHT-----TT-SEEEE
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec--------CHHHHH-----hhCCEEEE
Confidence 4578999999999999999999999999 999999998776666556653 22 122222 15899999
Q ss_pred ecCChhhH-HHHHHhhhcCCceEEEec
Q 025101 149 CVGLASLV-QEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 149 ~~g~~~~~-~~~~~~l~~~~G~~v~~g 174 (258)
++|....+ .+-+..++++ ..+..+|
T Consensus 85 aTG~~~vi~~e~~~~mkdg-ail~n~G 110 (162)
T PF00670_consen 85 ATGNKDVITGEHFRQMKDG-AILANAG 110 (162)
T ss_dssp -SSSSSSB-HHHHHHS-TT-EEEEESS
T ss_pred CCCCccccCHHHHHHhcCC-eEEeccC
Confidence 99987643 4677788876 5555445
No 208
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.30 E-value=0.0066 Score=45.19 Aligned_cols=89 Identities=25% Similarity=0.223 Sum_probs=59.1
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCC
Q 025101 73 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 152 (258)
Q Consensus 73 ~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 152 (258)
.+|-++|.|.+|...++-+...|+ +|++.++++++.+.+.+.|+... .+..+.+. ..|+||-|+.+
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~s~~e~~~-----~~dvvi~~v~~ 67 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA--------DSPAEAAE-----QADVVILCVPD 67 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE--------SSHHHHHH-----HBSEEEE-SSS
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh--------hhhhhHhh-----cccceEeeccc
Confidence 368899999999999888888899 99999999999998888885322 22333333 36899988887
Q ss_pred hhhHHHHH------HhhhcCCceEEEeccc
Q 025101 153 ASLVQEAY------ACCRKGWGKTIVLGVD 176 (258)
Q Consensus 153 ~~~~~~~~------~~l~~~~G~~v~~g~~ 176 (258)
...+...+ ..+.++ ..++.+++.
T Consensus 68 ~~~v~~v~~~~~i~~~l~~g-~iiid~sT~ 96 (163)
T PF03446_consen 68 DDAVEAVLFGENILAGLRPG-KIIIDMSTI 96 (163)
T ss_dssp HHHHHHHHHCTTHGGGS-TT-EEEEE-SS-
T ss_pred chhhhhhhhhhHHhhccccc-eEEEecCCc
Confidence 65455443 334555 566666543
No 209
>PRK14967 putative methyltransferase; Provisional
Probab=97.30 E-value=0.0053 Score=48.24 Aligned_cols=97 Identities=19% Similarity=0.206 Sum_probs=64.1
Q ss_pred hcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc-eEEcCCCCCCccHHHHHHHhcC
Q 025101 66 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 66 ~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~-~vi~~~~~~~~~~~~~i~~~~~ 140 (258)
...+.++++||-.|+|. |..++.+++. |..+|++++.+++..+.+++ .+.. .+++ .++.+.+ ..
T Consensus 31 ~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~------~d~~~~~---~~ 99 (223)
T PRK14967 31 AEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR------GDWARAV---EF 99 (223)
T ss_pred hcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE------Cchhhhc---cC
Confidence 34567889999999986 8888888875 55589999999988776554 3432 2222 2232221 12
Q ss_pred CCCCEEEEecCC---------------------------hhhHHHHHHhhhcCCceEEEec
Q 025101 141 GGADYCFECVGL---------------------------ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 141 ~~~d~v~d~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~g 174 (258)
+.+|+|+.+.+. ...+..+.+.|+++ |+++++-
T Consensus 100 ~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~ 159 (223)
T PRK14967 100 RPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ 159 (223)
T ss_pred CCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence 379999965321 11245677889999 9988653
No 210
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.29 E-value=0.002 Score=51.96 Aligned_cols=78 Identities=23% Similarity=0.333 Sum_probs=58.9
Q ss_pred CCCCEEEEEcc-CHHHHH-HHHHHHHcCCCeEEEEcCCcchHHHHH-----hcCCc---eEEcCCCCCCcc-HHHHHHHh
Q 025101 70 EVGSTVVIFGL-GSIGLA-VAEGARLCGATRIIGVDVISEKFEIGK-----RFGVT---EFVNSKNCGDKS-VSQIIIDM 138 (258)
Q Consensus 70 ~~g~~vlI~G~-g~~G~~-a~~l~~~~g~~~v~~~~~~~~~~~~~~-----~~g~~---~vi~~~~~~~~~-~~~~i~~~ 138 (258)
+.|+|.+|+|+ .++|.+ +-++|+ .|+ +|+.+.|+.+|++.++ +.++. .++|..+ .+ ..+.+++.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~---~~~~ye~i~~~ 121 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK---GDEVYEKLLEK 121 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC---CchhHHHHHHH
Confidence 35789999998 699976 556666 899 8999999999987764 34532 4678777 33 46677776
Q ss_pred cCC-CCCEEEEecCC
Q 025101 139 TDG-GADYCFECVGL 152 (258)
Q Consensus 139 ~~~-~~d~v~d~~g~ 152 (258)
..+ .+-+.++++|-
T Consensus 122 l~~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 122 LAGLDVGILVNNVGM 136 (312)
T ss_pred hcCCceEEEEecccc
Confidence 666 88889999884
No 211
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.29 E-value=0.0035 Score=51.11 Aligned_cols=71 Identities=20% Similarity=0.189 Sum_probs=50.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcC----CceEEcCCCCCCccHHHHHHHhcCCCCCE
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG----VTEFVNSKNCGDKSVSQIIIDMTDGGADY 145 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g----~~~vi~~~~~~~~~~~~~i~~~~~~~~d~ 145 (258)
.+.+++|+|+|+.|.+++..+...|+++|++++|+.+|.+.+ ++++ ...+... +++.+.+ ..+|+
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~-----~~~~~~~-----~~aDi 195 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG-----SDLAAAL-----AAADG 195 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec-----cchHhhh-----CCCCE
Confidence 567999999999999999999999998899999998887654 3332 1122221 1221111 16999
Q ss_pred EEEecC
Q 025101 146 CFECVG 151 (258)
Q Consensus 146 v~d~~g 151 (258)
||+|+.
T Consensus 196 VInaTp 201 (284)
T PRK12549 196 LVHATP 201 (284)
T ss_pred EEECCc
Confidence 999964
No 212
>PRK00811 spermidine synthase; Provisional
Probab=97.29 E-value=0.002 Score=52.55 Aligned_cols=95 Identities=15% Similarity=0.202 Sum_probs=63.9
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcC------C--c---eEEcCCCCCCccHHHHHHHh
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG------V--T---EFVNSKNCGDKSVSQIIIDM 138 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g------~--~---~vi~~~~~~~~~~~~~i~~~ 138 (258)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.++++- . + .++. .+..+.+..
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~- 146 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI------GDGIKFVAE- 146 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE------CchHHHHhh-
Confidence 3568999999875 777888888767669999999999888887631 1 1 1111 334444443
Q ss_pred cCCCCCEEE-EecCC---------hhhHHHHHHhhhcCCceEEEe
Q 025101 139 TDGGADYCF-ECVGL---------ASLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 139 ~~~~~d~v~-d~~g~---------~~~~~~~~~~l~~~~G~~v~~ 173 (258)
..+.+|+|| |+... ...++.+.+.|+++ |.++.-
T Consensus 147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~ 190 (283)
T PRK00811 147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQ 190 (283)
T ss_pred CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence 334899998 43211 22256788999999 998864
No 213
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0021 Score=51.86 Aligned_cols=79 Identities=18% Similarity=0.294 Sum_probs=51.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-c----CCc-eE--EcCCCCCCccHHHHHHHhcC-
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-EF--VNSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~----g~~-~v--i~~~~~~~~~~~~~i~~~~~- 140 (258)
+|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+.+ + +.. .+ .|..+ .++....+.+...
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK--REDLERTVKELKNI 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHHHhh
Confidence 4789999987 8999999999998999 89999998877654432 2 322 12 23333 1223233332221
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+++|+++.+.|.
T Consensus 84 g~iD~lv~nag~ 95 (263)
T PRK08339 84 GEPDIFFFSTGG 95 (263)
T ss_pred CCCcEEEECCCC
Confidence 379999998874
No 214
>PLN02366 spermidine synthase
Probab=97.27 E-value=0.0035 Score=51.59 Aligned_cols=103 Identities=15% Similarity=0.148 Sum_probs=64.6
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhc-CC-ceEEcCCCC--CCccHHHHHHHhcCCCCCE
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV-TEFVNSKNC--GDKSVSQIIIDMTDGGADY 145 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~-g~-~~vi~~~~~--~~~~~~~~i~~~~~~~~d~ 145 (258)
...++|||+|+|. |.++..+++.-+..+|.+++.+++-.+.++++ +. ...++.... -..+..+.+++..++.+|+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv 168 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA 168 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence 4578999999875 66777888876666899999888888887773 21 000110000 0023334444433347999
Q ss_pred EE-EecC---------ChhhHHHHHHhhhcCCceEEEec
Q 025101 146 CF-ECVG---------LASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 146 v~-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g 174 (258)
|| |+.. ....++.+.+.|+|+ |.++.-+
T Consensus 169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 169 IIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred EEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 98 4432 112367888999999 9987543
No 215
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0055 Score=48.69 Aligned_cols=79 Identities=20% Similarity=0.228 Sum_probs=50.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCc-eE--EcCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~-~v--i~~~~~~~~~~~~~i~~~~~-- 140 (258)
++++++|+|+ |++|+.++..+...|+ +|+++++++++.+.+ +..+.. .+ .|..+ .+++...+.+...
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD--PASVQRFFDAAAAAL 82 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4789999987 8999999999888999 899998887765433 223322 12 23333 1222222222211
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+++|++|.+.|.
T Consensus 83 ~~id~vi~~ag~ 94 (250)
T PRK12939 83 GGLDGLVNNAGI 94 (250)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
No 216
>PRK06484 short chain dehydrogenase; Validated
Probab=97.26 E-value=0.005 Score=54.77 Aligned_cols=103 Identities=22% Similarity=0.256 Sum_probs=67.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCce---EEcCCCCCCccHHHHHHHhcC--CCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE---FVNSKNCGDKSVSQIIIDMTD--GGA 143 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~---vi~~~~~~~~~~~~~i~~~~~--~~~ 143 (258)
.|+++||+|+ +++|..+++.+...|+ +|+++++++++.+.+.+ ++... ..|..+ .+++...+.+... +.+
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGRL 344 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 5789999986 8999999998888999 99999998877766544 44322 223333 1223333333221 369
Q ss_pred CEEEEecCChh--------------------------hHHHHHHhhhcCCceEEEecccC
Q 025101 144 DYCFECVGLAS--------------------------LVQEAYACCRKGWGKTIVLGVDQ 177 (258)
Q Consensus 144 d~v~d~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~~ 177 (258)
|++|.+.|... ..+.++..++.+ |+++.++...
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~~ 403 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSIA 403 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECchh
Confidence 99999887410 133444555566 8998887643
No 217
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0018 Score=52.36 Aligned_cols=78 Identities=24% Similarity=0.272 Sum_probs=51.9
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcC-Cce-EEcCCCCCCccHHHHHHHhcC--CCCCE
Q 025101 72 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG-VTE-FVNSKNCGDKSVSQIIIDMTD--GGADY 145 (258)
Q Consensus 72 g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g-~~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~ 145 (258)
+.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++ +.. ..|..+ .+++.+.+.+... +++|+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 678999987 8999999988888899 899999988776544 3444 221 224333 1233222332221 37999
Q ss_pred EEEecCC
Q 025101 146 CFECVGL 152 (258)
Q Consensus 146 v~d~~g~ 152 (258)
++.+.|.
T Consensus 82 li~~ag~ 88 (273)
T PRK07825 82 LVNNAGV 88 (273)
T ss_pred EEECCCc
Confidence 9998874
No 218
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.0066 Score=48.14 Aligned_cols=75 Identities=12% Similarity=0.077 Sum_probs=47.4
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcC--Cc-eEEcCCCCCCccHHHHHHHhcCCCCCEEEE
Q 025101 73 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--VT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE 148 (258)
Q Consensus 73 ~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g--~~-~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d 148 (258)
.+++|+|+ |++|..++..+...|+ +|+++++++++.+.+.+.+ .. ...|..+ .+++.+.+.+. ....|.++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~-~~~~d~~i~ 77 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD--HPGTKAALSQL-PFIPELWIF 77 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC--HHHHHHHHHhc-ccCCCEEEE
Confidence 57899986 9999998888888899 8999999988776665433 21 1233333 12233333322 224677766
Q ss_pred ecC
Q 025101 149 CVG 151 (258)
Q Consensus 149 ~~g 151 (258)
+.|
T Consensus 78 ~ag 80 (240)
T PRK06101 78 NAG 80 (240)
T ss_pred cCc
Confidence 554
No 219
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.25 E-value=0.0046 Score=53.96 Aligned_cols=78 Identities=24% Similarity=0.414 Sum_probs=50.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcch--H-HHHHhcCCce-EEcCCCCCCccHHHHHHH-hcC--CC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--F-EIGKRFGVTE-FVNSKNCGDKSVSQIIID-MTD--GG 142 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~--~-~~~~~~g~~~-vi~~~~~~~~~~~~~i~~-~~~--~~ 142 (258)
+|+++||+|+ |++|..+++.+...|+ +|+++++++.. . +...+++... ..|..+ .+..+.+.+ ... ++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~---~~~~~~~~~~~~~~~g~ 284 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA---PDAPARIAEHLAERHGG 284 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC---HHHHHHHHHHHHHhCCC
Confidence 5789999987 9999999999988999 89988874322 2 2233455432 235444 333333322 211 26
Q ss_pred CCEEEEecCC
Q 025101 143 ADYCFECVGL 152 (258)
Q Consensus 143 ~d~v~d~~g~ 152 (258)
+|++|.+.|.
T Consensus 285 id~vi~~AG~ 294 (450)
T PRK08261 285 LDIVVHNAGI 294 (450)
T ss_pred CCEEEECCCc
Confidence 9999999883
No 220
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.25 E-value=0.0038 Score=48.22 Aligned_cols=35 Identities=31% Similarity=0.322 Sum_probs=31.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 105 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~ 105 (258)
.+.+|+|+|+|++|..+++.+...|..++..++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 46789999999999999999999999889998866
No 221
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.003 Score=50.11 Aligned_cols=77 Identities=19% Similarity=0.306 Sum_probs=53.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCce-EEcCCCCCCccHHHHHHHhcCCCCCEEE
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCF 147 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~-vi~~~~~~~~~~~~~i~~~~~~~~d~v~ 147 (258)
++++++|+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+ .+... ..|..+ .+......+. .+++|++|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~-~~~~d~vi 82 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD---DAAIRAALAA-AGAFDGLV 82 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHH-hCCCCEEE
Confidence 5689999997 8999999999999999 89999998877655433 44432 234433 3322222222 13699999
Q ss_pred EecCC
Q 025101 148 ECVGL 152 (258)
Q Consensus 148 d~~g~ 152 (258)
.+.|.
T Consensus 83 ~~ag~ 87 (245)
T PRK07060 83 NCAGI 87 (245)
T ss_pred ECCCC
Confidence 98874
No 222
>PRK07402 precorrin-6B methylase; Provisional
Probab=97.24 E-value=0.0078 Score=46.26 Aligned_cols=102 Identities=21% Similarity=0.350 Sum_probs=64.2
Q ss_pred hhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCce--EEcCCCCCCccHHHHHHH
Q 025101 64 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIID 137 (258)
Q Consensus 64 ~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~i~~ 137 (258)
.....+.++++||-+|+|. |..++.+++.....+|++++.+++..+.+++ ++... ++. .+..+.+..
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~------~d~~~~~~~ 105 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE------GSAPECLAQ 105 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE------CchHHHHhh
Confidence 4555778899999998863 6666777765432399999999988777654 55432 222 122222222
Q ss_pred hcCCCCCEEE-EecCC-hhhHHHHHHhhhcCCceEEEec
Q 025101 138 MTDGGADYCF-ECVGL-ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 138 ~~~~~~d~v~-d~~g~-~~~~~~~~~~l~~~~G~~v~~g 174 (258)
.. ..+|.++ +.... ...++.+.+.|+|+ |+++...
T Consensus 106 ~~-~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~ 142 (196)
T PRK07402 106 LA-PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATA 142 (196)
T ss_pred CC-CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 22 2345544 43222 35588899999999 9988775
No 223
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.22 E-value=0.0021 Score=51.71 Aligned_cols=79 Identities=23% Similarity=0.259 Sum_probs=52.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCc-eE--EcCCCCCCccHHHHHHHhcC--CCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGA 143 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~-~v--i~~~~~~~~~~~~~i~~~~~--~~~ 143 (258)
+++++||+|+ +++|..+++.+...|+ +|+++++++++.+.+.+ ++.. .+ .|..+ .+++...+.+... +.+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS--YADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC--HHHHHHHHHHHHHhcCCC
Confidence 5789999987 8999999999988999 89999998877765543 4321 12 23322 1223333333221 269
Q ss_pred CEEEEecCC
Q 025101 144 DYCFECVGL 152 (258)
Q Consensus 144 d~v~d~~g~ 152 (258)
|++|++.|.
T Consensus 82 d~li~~ag~ 90 (263)
T PRK06200 82 DCFVGNAGI 90 (263)
T ss_pred CEEEECCCC
Confidence 999998873
No 224
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0041 Score=49.85 Aligned_cols=82 Identities=23% Similarity=0.306 Sum_probs=51.5
Q ss_pred CCCCCCEEEEEcc-CHHHHHHHHHHHHc-CCCeEEEEcCCcch-HHH----HHhcCC-c-eEE--cCCCCCCccHHHHHH
Q 025101 68 NVEVGSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEK-FEI----GKRFGV-T-EFV--NSKNCGDKSVSQIII 136 (258)
Q Consensus 68 ~~~~g~~vlI~G~-g~~G~~a~~l~~~~-g~~~v~~~~~~~~~-~~~----~~~~g~-~-~vi--~~~~~~~~~~~~~i~ 136 (258)
.+..++++||+|+ |++|..+++-+... |+ +|+++++++++ .+. +++.+. . +++ |..+ .++..+.+.
T Consensus 4 ~~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~--~~~~~~~~~ 80 (253)
T PRK07904 4 AVGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD--TDSHPKVID 80 (253)
T ss_pred ccCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC--hHHHHHHHH
Confidence 3567889999987 89999988876666 47 89999998775 332 233332 1 222 3332 123333333
Q ss_pred HhcC-CCCCEEEEecCC
Q 025101 137 DMTD-GGADYCFECVGL 152 (258)
Q Consensus 137 ~~~~-~~~d~v~d~~g~ 152 (258)
+... +++|+++.+.|.
T Consensus 81 ~~~~~g~id~li~~ag~ 97 (253)
T PRK07904 81 AAFAGGDVDVAIVAFGL 97 (253)
T ss_pred HHHhcCCCCEEEEeeec
Confidence 3322 479999987764
No 225
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0019 Score=51.63 Aligned_cols=79 Identities=23% Similarity=0.268 Sum_probs=51.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCce--E--EcCCCCCCccHHHHHHHhcC--CCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE--F--VNSKNCGDKSVSQIIIDMTD--GGA 143 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~--v--i~~~~~~~~~~~~~i~~~~~--~~~ 143 (258)
+++++||+|+ |++|..+++.+...|+ +|++++++++..+...++.... . .|..+ .+++...+.+... +++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~~ 90 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD--SQSVEAAVAAVISAFGRI 90 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4789999987 8999999988888999 8999998876655554433211 2 23332 1223222322221 269
Q ss_pred CEEEEecCC
Q 025101 144 DYCFECVGL 152 (258)
Q Consensus 144 d~v~d~~g~ 152 (258)
|.++.+.|.
T Consensus 91 d~vi~~ag~ 99 (255)
T PRK06841 91 DILVNSAGV 99 (255)
T ss_pred CEEEECCCC
Confidence 999998874
No 226
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.21 E-value=0.0015 Score=52.51 Aligned_cols=78 Identities=17% Similarity=0.178 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCc-eE--EcCCCCCCccHHHHHHHhcC--CCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGA 143 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~-~v--i~~~~~~~~~~~~~i~~~~~--~~~ 143 (258)
++++++|+|+ |++|..+++.+...|+ +|++++++.++.+.+++ .+.. .. .|..+ .++..+.+.+... +.+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 4789999987 8999999998888999 89999998877665544 3321 11 23332 1223333333222 268
Q ss_pred CEEEEecC
Q 025101 144 DYCFECVG 151 (258)
Q Consensus 144 d~v~d~~g 151 (258)
|++|.+.|
T Consensus 81 d~li~~Ag 88 (262)
T TIGR03325 81 DCLIPNAG 88 (262)
T ss_pred CEEEECCC
Confidence 99999876
No 227
>PRK08618 ornithine cyclodeaminase; Validated
Probab=97.21 E-value=0.0059 Score=50.89 Aligned_cols=97 Identities=18% Similarity=0.106 Sum_probs=66.7
Q ss_pred CCCCCCEEEEEccCHHHHHHHHHH-HHcCCCeEEEEcCCcchHHHH-Hh----cCCceEEcCCCCCCccHHHHHHHhcCC
Q 025101 68 NVEVGSTVVIFGLGSIGLAVAEGA-RLCGATRIIGVDVISEKFEIG-KR----FGVTEFVNSKNCGDKSVSQIIIDMTDG 141 (258)
Q Consensus 68 ~~~~g~~vlI~G~g~~G~~a~~l~-~~~g~~~v~~~~~~~~~~~~~-~~----~g~~~vi~~~~~~~~~~~~~i~~~~~~ 141 (258)
..+..++++|+|+|..|...+..+ ...++++|.++++++++.+.+ ++ ++.. +... ++..+.+.
T Consensus 123 a~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~-----~~~~~~~~----- 191 (325)
T PRK08618 123 AREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV-----NSADEAIE----- 191 (325)
T ss_pred cCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe-----CCHHHHHh-----
Confidence 334567899999999998766544 467888999999998886544 32 3432 2222 22333332
Q ss_pred CCCEEEEecCChhhHHHHHHhhhcCCceEEEecccCC
Q 025101 142 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 178 (258)
Q Consensus 142 ~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 178 (258)
..|+|+.|+++.. .... ..++++ -+++.+|....
T Consensus 192 ~aDiVi~aT~s~~-p~i~-~~l~~G-~hV~~iGs~~p 225 (325)
T PRK08618 192 EADIIVTVTNAKT-PVFS-EKLKKG-VHINAVGSFMP 225 (325)
T ss_pred cCCEEEEccCCCC-cchH-HhcCCC-cEEEecCCCCc
Confidence 6999999998876 3334 888998 89989986543
No 228
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0019 Score=51.87 Aligned_cols=82 Identities=23% Similarity=0.287 Sum_probs=53.2
Q ss_pred CCCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCc----eEEcCCCCCCccHHHHHHHhcC--
Q 025101 69 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT----EFVNSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 69 ~~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~----~vi~~~~~~~~~~~~~i~~~~~-- 140 (258)
.-++.++||+|+ |.+|..+++.+...|+ +|++++++++..+.+.+ .+-. ...|..+ .+.+.+.+.+...
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD--PAQVERVFDTAVERF 84 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 347789999987 9999999999988999 89999998776655433 2211 1223333 1222222222211
Q ss_pred CCCCEEEEecCCh
Q 025101 141 GGADYCFECVGLA 153 (258)
Q Consensus 141 ~~~d~v~d~~g~~ 153 (258)
+++|.||.+.|..
T Consensus 85 ~~~d~vi~~ag~~ 97 (264)
T PRK12829 85 GGLDVLVNNAGIA 97 (264)
T ss_pred CCCCEEEECCCCC
Confidence 2799999988753
No 229
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.20 E-value=0.0039 Score=48.26 Aligned_cols=94 Identities=17% Similarity=0.161 Sum_probs=60.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcc-hHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEe
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 149 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~ 149 (258)
.|.+|||+|+|.+|..-++.+...|+ +|++++.... ....+.+.|--..+. .+ +... .+ .++++||-+
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~-----~~~~--dl--~~~~lVi~a 76 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RC-----FDAD--IL--EGAFLVIAA 76 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CC-----CCHH--Hh--CCcEEEEEC
Confidence 47899999999999999999999999 8998876543 223333334212222 22 1111 11 179999999
Q ss_pred cCChhhHHHHHHhhhcCCceEEEeccc
Q 025101 150 VGLASLVQEAYACCRKGWGKTIVLGVD 176 (258)
Q Consensus 150 ~g~~~~~~~~~~~l~~~~G~~v~~g~~ 176 (258)
++.+..-.......+.. |..+.+...
T Consensus 77 t~d~~ln~~i~~~a~~~-~ilvn~~d~ 102 (205)
T TIGR01470 77 TDDEELNRRVAHAARAR-GVPVNVVDD 102 (205)
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEECCC
Confidence 99986344566666666 776655433
No 230
>PLN02476 O-methyltransferase
Probab=97.19 E-value=0.0035 Score=50.61 Aligned_cols=105 Identities=16% Similarity=0.190 Sum_probs=69.5
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHH----hcCCceEEcCCCCCCccHHHHHHHhc
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMT 139 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g-~~~v~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~i~~~~ 139 (258)
...+..+.++||-+|.+ +|..++.+++.++ -.+|+.++.+++..+.++ +.|..+-+.... .+..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~---GdA~e~L~~l~ 187 (278)
T PLN02476 112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH---GLAAESLKSMI 187 (278)
T ss_pred HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHH
Confidence 34556678999999975 4777888888764 227999999998877764 466542223222 34445554431
Q ss_pred ----CCCCCEEE-EecCC--hhhHHHHHHhhhcCCceEEEec
Q 025101 140 ----DGGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 140 ----~~~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~g 174 (258)
.+.||.|| |+--. ...++.+++.++++ |.++.=.
T Consensus 188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DN 228 (278)
T PLN02476 188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDN 228 (278)
T ss_pred hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEec
Confidence 23799998 55432 44578899999998 9876443
No 231
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.002 Score=52.87 Aligned_cols=79 Identities=20% Similarity=0.297 Sum_probs=53.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCC--ce-E--EcCCCCCCccHHHHHHHhcC--C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV--TE-F--VNSKNCGDKSVSQIIIDMTD--G 141 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~--~~-v--i~~~~~~~~~~~~~i~~~~~--~ 141 (258)
+|+++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++. .. . .|..+ .+++...+.+... +
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 5789999987 8999999999999999 899999988776544 44542 11 1 34333 1222222222221 3
Q ss_pred CCCEEEEecCC
Q 025101 142 GADYCFECVGL 152 (258)
Q Consensus 142 ~~d~v~d~~g~ 152 (258)
++|++|++.|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 232
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0027 Score=52.08 Aligned_cols=79 Identities=23% Similarity=0.315 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc-eE--EcCCCCCCccHHHHHHHhc--C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIIIDMT--D 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~-~v--i~~~~~~~~~~~~~i~~~~--~ 140 (258)
.+++++|+|+ |++|..+++.+...|+ +|++++++.++.+.+. +.+.. .+ .|..+ .+++.+.+.... -
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD--LDAVDALVADVEKRI 115 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4678999987 8999999998888899 9999999987765442 22322 12 23322 122222222221 1
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+.+|++|.+.|.
T Consensus 116 g~id~li~~AG~ 127 (293)
T PRK05866 116 GGVDILINNAGR 127 (293)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
No 233
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.17 E-value=0.0031 Score=46.39 Aligned_cols=96 Identities=22% Similarity=0.236 Sum_probs=61.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHH-HHhcCCce-EEcCCCCCCccHHHHHHHhcCCCCCEEE
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCF 147 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~-~~~~g~~~-vi~~~~~~~~~~~~~i~~~~~~~~d~v~ 147 (258)
.++.+++|+|+|.+|...++.+...|..+|+++++++++.+. +++++... .... .+..+. -.++|+|+
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-----~~~~Dvvi 86 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY-----LDLEEL-----LAEADLII 86 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee-----cchhhc-----cccCCEEE
Confidence 457899999999999999988888864489999998877654 45555421 0111 111111 12799999
Q ss_pred EecCChhh----HHHHHHhhhcCCceEEEeccc
Q 025101 148 ECVGLASL----VQEAYACCRKGWGKTIVLGVD 176 (258)
Q Consensus 148 d~~g~~~~----~~~~~~~l~~~~G~~v~~g~~ 176 (258)
.|++.... .......++++ ..++.++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~~ 118 (155)
T cd01065 87 NTTPVGMKPGDELPLPPSLLKPG-GVVYDVVYN 118 (155)
T ss_pred eCcCCCCCCCCCCCCCHHHcCCC-CEEEEcCcC
Confidence 99887541 11222345666 677767643
No 234
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=97.17 E-value=0.012 Score=46.30 Aligned_cols=92 Identities=23% Similarity=0.237 Sum_probs=59.7
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCC--eEEEEcCC----cch--------HHHHHhcCCceEEcCCCCCCccHHHHH
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGAT--RIIGVDVI----SEK--------FEIGKRFGVTEFVNSKNCGDKSVSQII 135 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~--~v~~~~~~----~~~--------~~~~~~~g~~~vi~~~~~~~~~~~~~i 135 (258)
-++.+++|+|+|+.|..++..+...|.+ ++++++++ .++ .+++++++... . + .++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~---~~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G---GTLKEAL 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c---CCHHHHH
Confidence 4578999999999999999888888997 89999998 444 23444443211 1 0 1233333
Q ss_pred HHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEec
Q 025101 136 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 136 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 174 (258)
. ++|++|++++....-...++.+.++ ..+..+.
T Consensus 96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 96 K-----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred h-----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeC
Confidence 2 4899999997333123566666665 5555443
No 235
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=97.17 E-value=0.0027 Score=55.70 Aligned_cols=79 Identities=24% Similarity=0.326 Sum_probs=55.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCc---------------------chHHHHHhcCCceEEcCCCCCC
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS---------------------EKFEIGKRFGVTEFVNSKNCGD 128 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~---------------------~~~~~~~~~g~~~vi~~~~~~~ 128 (258)
.++++|+|+|+|+.|+.++..++..|+ +|+++++.+ ...+.++++|++..++..-.
T Consensus 139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~-- 215 (467)
T TIGR01318 139 PTGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG-- 215 (467)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC--
Confidence 367899999999999999999999999 898887654 23466788897655544320
Q ss_pred ccHHHHHHHhcCCCCCEEEEecCChh
Q 025101 129 KSVSQIIIDMTDGGADYCFECVGLAS 154 (258)
Q Consensus 129 ~~~~~~i~~~~~~~~d~v~d~~g~~~ 154 (258)
.++ .+.+.. .++|.||.++|...
T Consensus 216 ~~~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 216 RDI--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred Ccc--CHHHHH-hcCCEEEEEeCCCC
Confidence 111 111211 16999999999743
No 236
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=97.16 E-value=0.0021 Score=49.47 Aligned_cols=99 Identities=16% Similarity=0.244 Sum_probs=62.8
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCceEEcCCCCCCccHHHHHHHhcC
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~~ 140 (258)
+.....++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++ .+...+ +... .++.+. .. +
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~~~~--~~-~ 93 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDLNNL--TF-D 93 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cChhhC--Cc-C
Confidence 344456778999999875 7788888875 77 99999999987776654 232211 1111 111110 11 2
Q ss_pred CCCCEEEEecC----C----hhhHHHHHHhhhcCCceEEEec
Q 025101 141 GGADYCFECVG----L----ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 141 ~~~d~v~d~~g----~----~~~~~~~~~~l~~~~G~~v~~g 174 (258)
+.||+|+.+.. . ...+..+.+.|+|+ |.++.+.
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 37999997543 1 23467888889999 9966554
No 237
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.16 E-value=0.0027 Score=51.67 Aligned_cols=95 Identities=17% Similarity=0.103 Sum_probs=60.9
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEE
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 148 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d 148 (258)
..+.+++|+|+|++|.+++..+...|+.+|+++.|+.++.+.+. +++....+.. . .+..+.+ ..+|+||+
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~~~~~-----~~~DivIn 191 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LELQEEL-----ADFDLIIN 191 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccchhcc-----ccCCEEEE
Confidence 35789999999999999999999999669999999988876553 3432110111 1 0111111 26999999
Q ss_pred ecCChhh-----HHHHHHhhhcCCceEEEec
Q 025101 149 CVGLASL-----VQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 149 ~~g~~~~-----~~~~~~~l~~~~G~~v~~g 174 (258)
|++.... .......+.+. ..++.+-
T Consensus 192 aTp~g~~~~~~~~~~~~~~l~~~-~~v~Div 221 (278)
T PRK00258 192 ATSAGMSGELPLPPLPLSLLRPG-TIVYDMI 221 (278)
T ss_pred CCcCCCCCCCCCCCCCHHHcCCC-CEEEEee
Confidence 9875431 01223556666 6666664
No 238
>PRK06128 oxidoreductase; Provisional
Probab=97.16 E-value=0.0077 Score=49.55 Aligned_cols=79 Identities=23% Similarity=0.202 Sum_probs=47.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcch--H----HHHHhcCCce-E--EcCCCCCCccHHHHHHHhcC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--F----EIGKRFGVTE-F--VNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~--~----~~~~~~g~~~-v--i~~~~~~~~~~~~~i~~~~~ 140 (258)
.|+++||+|+ |++|..+++.+...|+ +|+++.++.+. . +.+++.|... + .|..+ .+++.+.+.+...
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~ 130 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD--EAFCRQLVERAVK 130 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHHHH
Confidence 4789999986 8999999988888899 88877654332 1 2233345322 2 23322 1222222222221
Q ss_pred --CCCCEEEEecCC
Q 025101 141 --GGADYCFECVGL 152 (258)
Q Consensus 141 --~~~d~v~d~~g~ 152 (258)
+++|++|.+.|.
T Consensus 131 ~~g~iD~lV~nAg~ 144 (300)
T PRK06128 131 ELGGLDILVNIAGK 144 (300)
T ss_pred HhCCCCEEEECCcc
Confidence 269999998873
No 239
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0029 Score=50.90 Aligned_cols=78 Identities=15% Similarity=0.175 Sum_probs=51.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc-eE--EcCCCCCCccHH-HHHHHhcC-
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVS-QIIIDMTD- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~-~v--i~~~~~~~~~~~-~~i~~~~~- 140 (258)
+++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ .+.. .+ .|..+ ++.. +.+.+...
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~ 84 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH---PEATAGLAGQAVEA 84 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC---HHHHHHHHHHHHHH
Confidence 5789999987 8999999999888999 99999998876554322 2322 12 34333 3322 22232211
Q ss_pred -CCCCEEEEecCC
Q 025101 141 -GGADYCFECVGL 152 (258)
Q Consensus 141 -~~~d~v~d~~g~ 152 (258)
+++|++|.+.|.
T Consensus 85 ~~~id~vi~~Ag~ 97 (263)
T PRK07814 85 FGRLDIVVNNVGG 97 (263)
T ss_pred cCCCCEEEECCCC
Confidence 379999998873
No 240
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0033 Score=50.56 Aligned_cols=81 Identities=23% Similarity=0.322 Sum_probs=52.5
Q ss_pred CCCCCEEEEEcc-C-HHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-----cCCceE----EcCCCCCCccHHHHHHH
Q 025101 69 VEVGSTVVIFGL-G-SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVTEF----VNSKNCGDKSVSQIIID 137 (258)
Q Consensus 69 ~~~g~~vlI~G~-g-~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-----~g~~~v----i~~~~~~~~~~~~~i~~ 137 (258)
+.+++++||+|+ | ++|.++++.+...|+ +|+++++++++.+...+ +|...+ .|..+ .+++...+.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~ 90 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALIDA 90 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHHH
Confidence 446789999986 6 799999999999999 89999888776544322 443222 23333 1222222222
Q ss_pred hc--CCCCCEEEEecCC
Q 025101 138 MT--DGGADYCFECVGL 152 (258)
Q Consensus 138 ~~--~~~~d~v~d~~g~ 152 (258)
.. .+.+|++|.+.|.
T Consensus 91 ~~~~~g~id~li~~ag~ 107 (262)
T PRK07831 91 AVERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHHcCCCCEEEECCCC
Confidence 21 1379999999884
No 241
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.14 E-value=0.0033 Score=50.04 Aligned_cols=78 Identities=23% Similarity=0.308 Sum_probs=51.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCce---EEcCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE---FVNSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~~~~i~~~~~-- 140 (258)
+++++||+|+ |++|+.+++.+...|+ +|+++++++++.+.+ +..+... ..|..+ .+++.+.+.....
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD--EEDVEATFAQIAEDF 80 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4789999987 9999999999988899 899999887665433 2234331 223222 1222222333222
Q ss_pred CCCCEEEEecC
Q 025101 141 GGADYCFECVG 151 (258)
Q Consensus 141 ~~~d~v~d~~g 151 (258)
+++|.+|.+.|
T Consensus 81 ~~id~vi~~ag 91 (253)
T PRK08217 81 GQLNGLINNAG 91 (253)
T ss_pred CCCCEEEECCC
Confidence 26899999887
No 242
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.14 E-value=0.005 Score=52.59 Aligned_cols=90 Identities=23% Similarity=0.302 Sum_probs=58.3
Q ss_pred EEEEccCHHHHHHHHHHHHcCCC-eEEEEcCCcchHHHHHh--cC--Cc-eEEcCCCCCCccHHHHHHHhcCCCCCEEEE
Q 025101 75 VVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR--FG--VT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE 148 (258)
Q Consensus 75 vlI~G~g~~G~~a~~l~~~~g~~-~v~~~~~~~~~~~~~~~--~g--~~-~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d 148 (258)
|+|+|+|.+|..+++.+...+-. +|++.+++.++.+.+.+ .+ +. ..+|..+ .. .+.+... +.|+|++
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~-~l~~~~~-~~dvVin 73 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-----PE-SLAELLR-GCDVVIN 73 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-----HH-HHHHHHT-TSSEEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-----HH-HHHHHHh-cCCEEEE
Confidence 68999999999999999876643 89999999999776643 22 21 2344433 22 2444433 5799999
Q ss_pred ecCChhhHHHHHHhhhcCCceEEE
Q 025101 149 CVGLASLVQEAYACCRKGWGKTIV 172 (258)
Q Consensus 149 ~~g~~~~~~~~~~~l~~~~G~~v~ 172 (258)
|+|.......+-.|+..+ -.++.
T Consensus 74 ~~gp~~~~~v~~~~i~~g-~~yvD 96 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAG-VHYVD 96 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT--EEEE
T ss_pred CCccchhHHHHHHHHHhC-CCeec
Confidence 999876455666666776 67776
No 243
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0027 Score=50.75 Aligned_cols=79 Identities=22% Similarity=0.235 Sum_probs=51.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc-e--EEcCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-E--FVNSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~-~--vi~~~~~~~~~~~~~i~~~~~-- 140 (258)
+|+++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ .+.. . ..|..+ .+++.+.+.+...
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 5789999987 8999999999888999 89999998876654422 2322 1 223333 1223332332221
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+.+|+++.+.|.
T Consensus 85 g~id~lv~~ag~ 96 (253)
T PRK05867 85 GGIDIAVCNAGI 96 (253)
T ss_pred CCCCEEEECCCC
Confidence 379999998774
No 244
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.12 E-value=0.0023 Score=52.12 Aligned_cols=76 Identities=13% Similarity=0.024 Sum_probs=51.5
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCc-eEEcCCCCCCccHHHHHHHhcCCCCCEEEE
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE 148 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~-~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d 148 (258)
++.+++|+|+|+.|.+++..+...|+++|+++.|+.+|.+.+ ++++.. .+.... .. +.+.... ..+|+||+
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~-----~~-~~~~~~~-~~~DiVIn 196 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE-----GD-SGGLAIE-KAAEVLVS 196 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc-----ch-hhhhhcc-cCCCEEEE
Confidence 578999999999999999999999988899999998887654 334321 111110 00 1111111 26999999
Q ss_pred ecCCh
Q 025101 149 CVGLA 153 (258)
Q Consensus 149 ~~g~~ 153 (258)
|++..
T Consensus 197 aTp~g 201 (282)
T TIGR01809 197 TVPAD 201 (282)
T ss_pred CCCCC
Confidence 98754
No 245
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.12 E-value=0.003 Score=51.20 Aligned_cols=78 Identities=18% Similarity=0.219 Sum_probs=49.0
Q ss_pred CCCEEEEEcc-C--HHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCceE--EcCCCCCCccHHHHHHHhcC-
Q 025101 71 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEF--VNSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g--~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~v--i~~~~~~~~~~~~~i~~~~~- 140 (258)
+++++||+|+ + ++|.++++.+...|+ +|++++++++..+.+ ++.|.... .|-.+ .+++...+.+...
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d--~~~v~~~~~~~~~~ 82 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED--IASVDAVFEALEKK 82 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC--HHHHHHHHHHHHHH
Confidence 5789999987 4 899999998888999 899888765332222 33453322 23333 1222223333221
Q ss_pred -CCCCEEEEecC
Q 025101 141 -GGADYCFECVG 151 (258)
Q Consensus 141 -~~~d~v~d~~g 151 (258)
+.+|+++++.|
T Consensus 83 ~g~iD~lVnnAG 94 (271)
T PRK06505 83 WGKLDFVVHAIG 94 (271)
T ss_pred hCCCCEEEECCc
Confidence 37999999887
No 246
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.11 E-value=0.0079 Score=44.59 Aligned_cols=78 Identities=27% Similarity=0.306 Sum_probs=47.8
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCC--cchHHHH----HhcCCc-eEE--cCCCCCCccHHHHHHHhc--C
Q 025101 73 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI--SEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMT--D 140 (258)
Q Consensus 73 ~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~--~~~~~~~----~~~g~~-~vi--~~~~~~~~~~~~~i~~~~--~ 140 (258)
+++||+|+ +++|..+++.+...|..+|+.+.++ .++.+.+ +..+.. .++ |..+ .+++...+.+.. .
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD--PESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS--HHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc--ccccccccccccccc
Confidence 47899986 8999998888877777578888888 3433322 334432 222 2222 123333333332 2
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+.+|++|.+.|.
T Consensus 79 ~~ld~li~~ag~ 90 (167)
T PF00106_consen 79 GPLDILINNAGI 90 (167)
T ss_dssp SSESEEEEECSC
T ss_pred cccccccccccc
Confidence 279999998886
No 247
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.10 E-value=0.0048 Score=52.41 Aligned_cols=96 Identities=17% Similarity=0.177 Sum_probs=66.6
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHH-HHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEE
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 148 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d 148 (258)
-++.++||+|+|-+|..++..+...|..+|+++-|+.+|.+ +++++|+. ++..+ ++.+.+. .+|+||.
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~-----el~~~l~-----~~DvVis 244 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE-----ELLEALA-----EADVVIS 244 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH-----HHHHhhh-----hCCEEEE
Confidence 36889999999999999999999999889999999988865 56779853 33332 2333332 5999999
Q ss_pred ecCChhh---HHHHHHhhhcCCc-eEEEeccc
Q 025101 149 CVGLASL---VQEAYACCRKGWG-KTIVLGVD 176 (258)
Q Consensus 149 ~~g~~~~---~~~~~~~l~~~~G-~~v~~g~~ 176 (258)
+++++.. -......+.+... -++.++.+
T Consensus 245 sTsa~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 245 STSAPHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred ecCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 9998652 2234444444313 35555543
No 248
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0022 Score=52.07 Aligned_cols=79 Identities=18% Similarity=0.214 Sum_probs=52.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhc-CCc-e--EEcCCCCCCccHHHHHHHhcC--CCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVT-E--FVNSKNCGDKSVSQIIIDMTD--GGA 143 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~-g~~-~--vi~~~~~~~~~~~~~i~~~~~--~~~ 143 (258)
.++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+. +.. . ..|..+ .+.+...+.+... +++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~ 79 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPI 79 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 3578999987 9999999998888899 899999988877655543 211 1 223333 1222232332221 269
Q ss_pred CEEEEecCC
Q 025101 144 DYCFECVGL 152 (258)
Q Consensus 144 d~v~d~~g~ 152 (258)
|+++.+.|.
T Consensus 80 d~vv~~ag~ 88 (277)
T PRK06180 80 DVLVNNAGY 88 (277)
T ss_pred CEEEECCCc
Confidence 999998875
No 249
>PRK06196 oxidoreductase; Provisional
Probab=97.10 E-value=0.0035 Score=51.93 Aligned_cols=79 Identities=18% Similarity=0.216 Sum_probs=51.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcC-Cce-EEcCCCCCCccHHHHHHHhcC--CCCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG-VTE-FVNSKNCGDKSVSQIIIDMTD--GGAD 144 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g-~~~-vi~~~~~~~~~~~~~i~~~~~--~~~d 144 (258)
.++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ .++. ... ..|..+ .+++...+.+... +++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence 5789999987 8999999988888899 899999988766543 2332 211 223333 1223233333222 3799
Q ss_pred EEEEecCC
Q 025101 145 YCFECVGL 152 (258)
Q Consensus 145 ~v~d~~g~ 152 (258)
++|.+.|.
T Consensus 102 ~li~nAg~ 109 (315)
T PRK06196 102 ILINNAGV 109 (315)
T ss_pred EEEECCCC
Confidence 99998873
No 250
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=97.08 E-value=0.0049 Score=56.23 Aligned_cols=77 Identities=26% Similarity=0.286 Sum_probs=55.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcc---------------------hHHHHHhcCCceEEcCCCCCCc
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCGDK 129 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~---------------------~~~~~~~~g~~~vi~~~~~~~~ 129 (258)
.+++|+|+|+|+.|+.++..++..|+ +|+++++.+. +.+.++++|++..++..-..+.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 58999999999999999999999999 8999987763 4566778888655554320011
Q ss_pred cHHHHHHHhcCCCCCEEEEecCCh
Q 025101 130 SVSQIIIDMTDGGADYCFECVGLA 153 (258)
Q Consensus 130 ~~~~~i~~~~~~~~d~v~d~~g~~ 153 (258)
.+ .++. .++|.||.++|..
T Consensus 388 ~~----~~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TF----SDLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CH----HHHH-hcCCEEEEeCCCC
Confidence 22 1221 2699999999974
No 251
>PRK06398 aldose dehydrogenase; Validated
Probab=97.07 E-value=0.0073 Score=48.48 Aligned_cols=74 Identities=22% Similarity=0.279 Sum_probs=48.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCc-eEEcCCCCCCccHHHHHHHhcC--CCCCEE
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADYC 146 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~v 146 (258)
+|+++||+|+ |++|.+++..+...|+ +|+++++++++.. ... ...|..+ ++++.+.+.+... +.+|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~--~~~i~~~~~~~~~~~~~id~l 76 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN--KEQVIKGIDYVISKYGRIDIL 76 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4789999987 8999999999988999 8999988765432 111 1123333 1223333333222 269999
Q ss_pred EEecCC
Q 025101 147 FECVGL 152 (258)
Q Consensus 147 ~d~~g~ 152 (258)
|.+.|.
T Consensus 77 i~~Ag~ 82 (258)
T PRK06398 77 VNNAGI 82 (258)
T ss_pred EECCCC
Confidence 998774
No 252
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.06 E-value=0.0036 Score=49.82 Aligned_cols=79 Identities=19% Similarity=0.216 Sum_probs=51.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcC--Cc-eE--EcCCCCCCccHHHHHHHhcC--C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG--VT-EF--VNSKNCGDKSVSQIIIDMTD--G 141 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g--~~-~v--i~~~~~~~~~~~~~i~~~~~--~ 141 (258)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ .++. .. .+ .|..+ .+++...+.+... +
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 80 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD--EADVEAAVAAALERFG 80 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence 4679999987 8999999988888899 899999998776543 2222 21 12 22222 1223333332211 2
Q ss_pred CCCEEEEecCC
Q 025101 142 GADYCFECVGL 152 (258)
Q Consensus 142 ~~d~v~d~~g~ 152 (258)
.+|.||.+.|.
T Consensus 81 ~~d~vi~~ag~ 91 (251)
T PRK07231 81 SVDILVNNAGT 91 (251)
T ss_pred CCCEEEECCCC
Confidence 69999998874
No 253
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0048 Score=49.31 Aligned_cols=74 Identities=16% Similarity=0.163 Sum_probs=49.9
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc-e--EEcCCCCCCccHHHHHHHhcCCCC
Q 025101 72 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-E--FVNSKNCGDKSVSQIIIDMTDGGA 143 (258)
Q Consensus 72 g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~-~--vi~~~~~~~~~~~~~i~~~~~~~~ 143 (258)
++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+++ .+.. . ..|..+ . +.+.....+++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~---~~~~~~~~~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD---A---IDRAQAAEWDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC---H---HHHHHHhcCCC
Confidence 468999987 8999999999998999 89999988766554432 2322 1 223333 2 22333333479
Q ss_pred CEEEEecCC
Q 025101 144 DYCFECVGL 152 (258)
Q Consensus 144 d~v~d~~g~ 152 (258)
|++|.+.|.
T Consensus 75 d~vi~~ag~ 83 (257)
T PRK09291 75 DVLLNNAGI 83 (257)
T ss_pred CEEEECCCc
Confidence 999998873
No 254
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=97.05 E-value=0.0013 Score=50.80 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=68.1
Q ss_pred hcCCCCCCEEEEEccCHHHHHHHHHHHHcC--CCeEEEEcCCcchHHHHHh----cCCceEEcCCCCCCccHHHHHHHhc
Q 025101 66 TANVEVGSTVVIFGLGSIGLAVAEGARLCG--ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT 139 (258)
Q Consensus 66 ~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g--~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~ 139 (258)
..+....++||-+|++ +|..++.+++.+. . +|+.++.++++.+.+++ .|...-|.... .+..+.+.++.
T Consensus 40 l~~~~~~k~vLEIGt~-~GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~---gda~~~l~~l~ 114 (205)
T PF01596_consen 40 LVRLTRPKRVLEIGTF-TGYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVIE---GDALEVLPELA 114 (205)
T ss_dssp HHHHHT-SEEEEESTT-TSHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE---S-HHHHHHHHH
T ss_pred HHHhcCCceEEEeccc-cccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE---eccHhhHHHHH
Confidence 3444566899999986 4889999998763 4 99999999998877754 56432222222 34444454442
Q ss_pred C----CCCCEEE-EecCC--hhhHHHHHHhhhcCCceEEEec
Q 025101 140 D----GGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 140 ~----~~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~g 174 (258)
. +.||.|| |+--. ..-+..+++.++++ |.++.=.
T Consensus 115 ~~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN 155 (205)
T PF01596_consen 115 NDGEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADN 155 (205)
T ss_dssp HTTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEET
T ss_pred hccCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcc
Confidence 2 3699998 66433 23477888999998 8877544
No 255
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.05 E-value=0.0025 Score=51.64 Aligned_cols=44 Identities=34% Similarity=0.341 Sum_probs=39.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 114 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~ 114 (258)
+|++++|+|+|+.+.+++.-++..|+++++++.|+.+|.+.+.+
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 57999999999999999999999998799999999998776644
No 256
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0041 Score=49.70 Aligned_cols=79 Identities=19% Similarity=0.266 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCce-EE--cCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-vi--~~~~~~~~~~~~~i~~~~~-- 140 (258)
+++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++.+... ++ |..+ .++....+.+...
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD--EAYAKALVALAVERF 81 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 4679999987 8999999988888999 899999988776543 2234321 22 3322 1222222332221
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+.+|++|.+.|.
T Consensus 82 ~~id~li~~ag~ 93 (254)
T PRK07478 82 GGLDIAFNNAGT 93 (254)
T ss_pred CCCCEEEECCCC
Confidence 279999998874
No 257
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.04 E-value=0.0071 Score=49.26 Aligned_cols=44 Identities=23% Similarity=0.216 Sum_probs=37.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 113 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~ 113 (258)
.++++++|+|+|+.|.+++..+...|+++++++.|+.+|.+.+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 34789999999999999988888899989999999988876553
No 258
>PRK04457 spermidine synthase; Provisional
Probab=97.04 E-value=0.011 Score=47.68 Aligned_cols=95 Identities=13% Similarity=0.148 Sum_probs=66.0
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhc-CC----c--eEEcCCCCCCccHHHHHHHhcCCC
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV----T--EFVNSKNCGDKSVSQIIIDMTDGG 142 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~-g~----~--~vi~~~~~~~~~~~~~i~~~~~~~ 142 (258)
.++++||++|+|+ |..+..+++.....++++++.+++-.+.+++. +. . .++. .+..+.+.+. ++.
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~------~Da~~~l~~~-~~~ 136 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE------ADGAEYIAVH-RHS 136 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE------CCHHHHHHhC-CCC
Confidence 4567899999875 88888888876544899999999999888773 31 1 1221 3444445432 237
Q ss_pred CCEEE-EecCC---------hhhHHHHHHhhhcCCceEEEe
Q 025101 143 ADYCF-ECVGL---------ASLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 143 ~d~v~-d~~g~---------~~~~~~~~~~l~~~~G~~v~~ 173 (258)
+|+|+ |.... ...++.+.+.|+|+ |.++..
T Consensus 137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin 176 (262)
T PRK04457 137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN 176 (262)
T ss_pred CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence 99998 54321 24578899999999 998763
No 259
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0042 Score=49.97 Aligned_cols=79 Identities=22% Similarity=0.257 Sum_probs=51.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-----cCCce----EEcCCCCCCccHHHHHHHhcC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVTE----FVNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-----~g~~~----vi~~~~~~~~~~~~~i~~~~~ 140 (258)
.|++++|+|+ +++|..+++.+...|+ +|+++++++++.+.+.+ .+... ..|..+ .+++.+.+.+...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 83 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence 5789999987 8999999999988999 89999998876654322 21111 123333 1222222332221
Q ss_pred --CCCCEEEEecCC
Q 025101 141 --GGADYCFECVGL 152 (258)
Q Consensus 141 --~~~d~v~d~~g~ 152 (258)
+.+|+++++.|.
T Consensus 84 ~~g~id~li~~Ag~ 97 (265)
T PRK07062 84 RFGGVDMLVNNAGQ 97 (265)
T ss_pred hcCCCCEEEECCCC
Confidence 369999998874
No 260
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.03 E-value=0.0052 Score=48.84 Aligned_cols=79 Identities=16% Similarity=0.275 Sum_probs=50.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcch--HHHHHhcCCc-eE--EcCCCCCCccHHHHHHHhcC--CC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GG 142 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~--~~~~~~~g~~-~v--i~~~~~~~~~~~~~i~~~~~--~~ 142 (258)
+|+++||+|+ |++|..+++.+...|+ +|+++++++.. .+.+++.+.. .+ .|..+ .+++...+.+... ++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 80 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD--IEAIKALVDSAVEEFGH 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHcCC
Confidence 5789999987 8999999988888899 89999876521 2333444432 12 23333 2333333333221 26
Q ss_pred CCEEEEecCC
Q 025101 143 ADYCFECVGL 152 (258)
Q Consensus 143 ~d~v~d~~g~ 152 (258)
+|+++.+.|.
T Consensus 81 ~d~li~~ag~ 90 (248)
T TIGR01832 81 IDILVNNAGI 90 (248)
T ss_pred CCEEEECCCC
Confidence 9999998864
No 261
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0035 Score=50.04 Aligned_cols=78 Identities=23% Similarity=0.277 Sum_probs=50.3
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc-eEE--cCCCCCCccHHHHHHHhcC--C
Q 025101 72 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD--G 141 (258)
Q Consensus 72 g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~-~vi--~~~~~~~~~~~~~i~~~~~--~ 141 (258)
|+++||+|+ |++|..+++.+...|+ +|+++++++++.+.+. +.+.. .++ |..+ .+++...+.+... +
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN--PEDVQKMVEQIDEKFG 77 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHhC
Confidence 578999987 8999999999998999 8999998877654432 22322 222 3322 1223333333221 2
Q ss_pred CCCEEEEecCC
Q 025101 142 GADYCFECVGL 152 (258)
Q Consensus 142 ~~d~v~d~~g~ 152 (258)
.+|+++++.|.
T Consensus 78 ~id~lI~~ag~ 88 (252)
T PRK07677 78 RIDALINNAAG 88 (252)
T ss_pred CccEEEECCCC
Confidence 69999998863
No 262
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.011 Score=47.78 Aligned_cols=74 Identities=19% Similarity=0.206 Sum_probs=48.4
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCce----EEcCCCCCCccHHH----HHHHhcC
Q 025101 74 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE----FVNSKNCGDKSVSQ----IIIDMTD 140 (258)
Q Consensus 74 ~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~----vi~~~~~~~~~~~~----~i~~~~~ 140 (258)
+++|+|+ |++|..+++.+...|+ +|+++++++++.+.+ +..+... ..|..+ ++..+ .+.+..
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~~- 76 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD---YDAVAAFAADIHAAH- 76 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC---HHHHHHHHHHHHHhc-
Confidence 6899986 8999999998888899 899988887665433 2234321 234443 33222 222222
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+++|++|.+.|.
T Consensus 77 ~~id~lv~~ag~ 88 (272)
T PRK07832 77 GSMDVVMNIAGI 88 (272)
T ss_pred CCCCEEEECCCC
Confidence 269999998874
No 263
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.02 E-value=0.0046 Score=49.64 Aligned_cols=78 Identities=14% Similarity=0.309 Sum_probs=48.3
Q ss_pred CCCEEEEEccC---HHHHHHHHHHHHcCCCeEEEEcCCcchHHH----HHhcCCceEE--cCCCCCCccHHHHHHHhcC-
Q 025101 71 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFGVTEFV--NSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 71 ~g~~vlI~G~g---~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~----~~~~g~~~vi--~~~~~~~~~~~~~i~~~~~- 140 (258)
+|+++||+|++ ++|.++++.+...|+ +|++++++++..+. .++++...++ |..+ .+++...+.....
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~ 85 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE--PGQLEAVFARIAEE 85 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCC--HHHHHHHHHHHHHH
Confidence 57899999863 899999988888999 89888887543222 2334432222 3222 1223322322221
Q ss_pred -CCCCEEEEecC
Q 025101 141 -GGADYCFECVG 151 (258)
Q Consensus 141 -~~~d~v~d~~g 151 (258)
+.+|+++++.|
T Consensus 86 ~g~ld~lv~nAg 97 (258)
T PRK07533 86 WGRLDFLLHSIA 97 (258)
T ss_pred cCCCCEEEEcCc
Confidence 37999999876
No 264
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.0051 Score=49.44 Aligned_cols=78 Identities=23% Similarity=0.338 Sum_probs=50.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-c--CCc-eE--EcCCCCCCccHHHHHHH-hc-CC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--GVT-EF--VNSKNCGDKSVSQIIID-MT-DG 141 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~--g~~-~v--i~~~~~~~~~~~~~i~~-~~-~~ 141 (258)
++.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ + +.. .. .|..+ .+-.+.+.+ .. -+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d---~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS---EAGREAVLARAREMG 79 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC---HHHHHHHHHHHHhcC
Confidence 4678999986 8999999998888899 89999998877655432 2 211 12 22222 222222221 11 23
Q ss_pred CCCEEEEecCC
Q 025101 142 GADYCFECVGL 152 (258)
Q Consensus 142 ~~d~v~d~~g~ 152 (258)
.+|.++.+.|.
T Consensus 80 ~id~lv~~ag~ 90 (263)
T PRK09072 80 GINVLINNAGV 90 (263)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 265
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=97.02 E-value=0.01 Score=47.62 Aligned_cols=98 Identities=19% Similarity=0.169 Sum_probs=66.3
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC-ceEEcCCCCCCccHHHHHHHhcC-CC
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTD-GG 142 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~~i~~~~~-~~ 142 (258)
....+.++++||-+|+|. |..+..+++..+..+|++++.+++..+.+++.-. ..++.. +.. ++.. +.
T Consensus 25 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~------d~~----~~~~~~~ 93 (258)
T PRK01683 25 ARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA------DIA----SWQPPQA 93 (258)
T ss_pred hhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC------chh----ccCCCCC
Confidence 445667889999999874 7778888887643499999999988888776432 122221 111 1112 27
Q ss_pred CCEEEEecC-----C-hhhHHHHHHhhhcCCceEEEec
Q 025101 143 ADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 143 ~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~g 174 (258)
+|+|+-... . ...+..+.+.|+|+ |.++...
T Consensus 94 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~ 130 (258)
T PRK01683 94 LDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM 130 (258)
T ss_pred ccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence 999985433 1 24588899999999 9987653
No 266
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.013 Score=47.62 Aligned_cols=77 Identities=23% Similarity=0.355 Sum_probs=48.6
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCc-eE--EcCCCCCCccHHHHHHHhc-CCCC
Q 025101 72 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMT-DGGA 143 (258)
Q Consensus 72 g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~-~v--i~~~~~~~~~~~~~i~~~~-~~~~ 143 (258)
++.++|+|+|++|..+++.+. .|+ +|+++++++++.+.+ ++.|.. .+ .|..+ .+++.+.+.+.. -+++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPV 77 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCC
Confidence 357889999899999888875 798 899999887665433 223422 12 23333 123333333321 1379
Q ss_pred CEEEEecCC
Q 025101 144 DYCFECVGL 152 (258)
Q Consensus 144 d~v~d~~g~ 152 (258)
|++|.+.|.
T Consensus 78 d~li~nAG~ 86 (275)
T PRK06940 78 TGLVHTAGV 86 (275)
T ss_pred CEEEECCCc
Confidence 999998874
No 267
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.0065 Score=47.54 Aligned_cols=76 Identities=17% Similarity=0.201 Sum_probs=52.1
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCc-eEEcCCCCCCccHHHHHH-HhcCCCCCEEEEe
Q 025101 73 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIII-DMTDGGADYCFEC 149 (258)
Q Consensus 73 ~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~i~-~~~~~~~d~v~d~ 149 (258)
++++|+|+ |++|..+++.+...|+ +|+.+++++++.+.++..+.. ...|..+ .+..+.+. ...++++|.+|.+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~~~~~~~d~vi~~ 77 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD---PASVAGLAWKLDGEALDAAVYV 77 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC---HHHHHHHHHHhcCCCCCEEEEC
Confidence 46899986 8999999888877899 899999988877766665543 2234333 33333332 2322379999988
Q ss_pred cCC
Q 025101 150 VGL 152 (258)
Q Consensus 150 ~g~ 152 (258)
.|.
T Consensus 78 ag~ 80 (222)
T PRK06953 78 AGV 80 (222)
T ss_pred CCc
Confidence 764
No 268
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.0046 Score=48.68 Aligned_cols=79 Identities=18% Similarity=0.156 Sum_probs=49.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHH-HH---hcCCce-EEcCCCCCCccHHHHHHHhcC--CC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-GK---RFGVTE-FVNSKNCGDKSVSQIIIDMTD--GG 142 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~-~~---~~g~~~-vi~~~~~~~~~~~~~i~~~~~--~~ 142 (258)
+++++||+|+ |.+|..+++.+...|+ +|+++++++++... ++ ..+... ..|..+ .+++...+.+... ++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 4789999987 9999999998888899 89999997765432 22 233321 123222 1222222222221 27
Q ss_pred CCEEEEecCC
Q 025101 143 ADYCFECVGL 152 (258)
Q Consensus 143 ~d~v~d~~g~ 152 (258)
+|+||.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 9999998763
No 269
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.0034 Score=49.67 Aligned_cols=81 Identities=22% Similarity=0.250 Sum_probs=52.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCC-c---eEEcCCCC---CCccHHHHHHHh
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV-T---EFVNSKNC---GDKSVSQIIIDM 138 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~-~---~vi~~~~~---~~~~~~~~i~~~ 138 (258)
++++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+. +.+. . .-.|..+. +...+.+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4679999986 8999999988888899 8999999987665432 2221 1 11232210 012233344444
Q ss_pred cCCCCCEEEEecCC
Q 025101 139 TDGGADYCFECVGL 152 (258)
Q Consensus 139 ~~~~~d~v~d~~g~ 152 (258)
.++.+|.+|.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 43478999998873
No 270
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.99 E-value=0.022 Score=45.82 Aligned_cols=104 Identities=15% Similarity=0.214 Sum_probs=60.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcc-------------------hH----HHHHhcCCc-eEEcCCCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------KF----EIGKRFGVT-EFVNSKNC 126 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~-------------------~~----~~~~~~g~~-~vi~~~~~ 126 (258)
.+.+|+|+|+|++|..++..+...|..+++.++.+.- |. +.+++.... .+....+.
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 5679999999999999999999999888988875421 11 112222221 22222110
Q ss_pred CCccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccC
Q 025101 127 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 177 (258)
Q Consensus 127 ~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 177 (258)
-..+.+.++...++|+||||+++...-..+.+.+...+=.++..|...
T Consensus 109 ---i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag 156 (268)
T PRK15116 109 ---ITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAG 156 (268)
T ss_pred ---cChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCcc
Confidence 001222333333699999999985533344444444314556555443
No 271
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=96.99 E-value=0.039 Score=44.86 Aligned_cols=59 Identities=24% Similarity=0.303 Sum_probs=45.3
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEE---cCCcchHHHHHhcCCceEEcCC
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV---DVISEKFEIGKRFGVTEFVNSK 124 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~---~~~~~~~~~~~~~g~~~vi~~~ 124 (258)
....+++|.+|+--=+|++|.+++.+++..|+ +++.+ ..|.+|.+.++.+|+..+..+.
T Consensus 55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy-~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGGTIVEATSGNTGIALAMVAAAKGY-RLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCCEEEEcCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 44568999966554459999999999999999 66655 4577888999999997665554
No 272
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.97 E-value=0.0068 Score=49.03 Aligned_cols=70 Identities=20% Similarity=0.074 Sum_probs=50.1
Q ss_pred CCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hcCCceEEcCCCCCCccHHHHHHHhcCCCCCEE
Q 025101 68 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYC 146 (258)
Q Consensus 68 ~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v 146 (258)
....+++++|+|+|+.+.+++..++..|+.+|+++.|++++.+.+. .++.. . . +.+. ...+|+|
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~-----~---~~~~---~~~~dlv 182 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----W-----R---PDLG---GIEADIL 182 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----c-----h---hhcc---cccCCEE
Confidence 3445678999999999999999998999978999999998876554 34311 0 0 0111 1268999
Q ss_pred EEecCC
Q 025101 147 FECVGL 152 (258)
Q Consensus 147 ~d~~g~ 152 (258)
++|+.-
T Consensus 183 INaTp~ 188 (272)
T PRK12550 183 VNVTPI 188 (272)
T ss_pred EECCcc
Confidence 998863
No 273
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.97 E-value=0.0058 Score=48.97 Aligned_cols=81 Identities=19% Similarity=0.199 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCceEEcCCCCCCccH-HHHHHHhc--CCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEFVNSKNCGDKSV-SQIIIDMT--DGG 142 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~vi~~~~~~~~~~-~~~i~~~~--~~~ 142 (258)
+++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ++.+....+-.-++++.+. .+.+.+.. -++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999987 9999999999988999 899999888665432 3344432211112111222 22222221 126
Q ss_pred CCEEEEecCC
Q 025101 143 ADYCFECVGL 152 (258)
Q Consensus 143 ~d~v~d~~g~ 152 (258)
+|++|.+.|.
T Consensus 85 ~d~vi~~ag~ 94 (262)
T PRK13394 85 VDILVSNAGI 94 (262)
T ss_pred CCEEEECCcc
Confidence 8999998874
No 274
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.97 E-value=0.0078 Score=49.27 Aligned_cols=36 Identities=22% Similarity=0.345 Sum_probs=31.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 106 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~ 106 (258)
++++++|+|+|++|.+++..+...|+++|+++.|+.
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 578999999999999998888889996699999986
No 275
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=96.96 E-value=0.0084 Score=46.67 Aligned_cols=100 Identities=18% Similarity=0.198 Sum_probs=63.4
Q ss_pred hhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCceEEcCCCCCCccHHHHHHHhc
Q 025101 64 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT 139 (258)
Q Consensus 64 ~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~ 139 (258)
....+++++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++ ++...+ +... .+..+ .+.
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~---~d~~~---~~~ 140 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNV-SVRH---GDGWK---GWP 140 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCce-EEEE---CCccc---CCC
Confidence 3567788999999999874 65666666653 3 89999999877666543 444321 1111 11111 111
Q ss_pred C-CCCCEEEEecCChhhHHHHHHhhhcCCceEEEec
Q 025101 140 D-GGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 140 ~-~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 174 (258)
. +.||+|+-............+.|+++ |+++..-
T Consensus 141 ~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~ 175 (212)
T PRK00312 141 AYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAPV 175 (212)
T ss_pred cCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence 1 37999986555444467788999999 9987553
No 276
>PRK06194 hypothetical protein; Provisional
Probab=96.96 E-value=0.0058 Score=49.80 Aligned_cols=79 Identities=22% Similarity=0.310 Sum_probs=50.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-Hhc---CCce-EE--cCCCCCCccHHHHHHHhc--C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF---GVTE-FV--NSKNCGDKSVSQIIIDMT--D 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~---g~~~-vi--~~~~~~~~~~~~~i~~~~--~ 140 (258)
.++++||+|+ |++|..+++.+...|+ +|++++++.++.+.. .++ +... ++ |..+ .+++.+.+.... -
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD--AAQVEALADAALERF 81 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 3678999986 8999999988888899 899999887665433 222 3321 12 2222 122222222221 1
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+++|++|.+.|.
T Consensus 82 g~id~vi~~Ag~ 93 (287)
T PRK06194 82 GAVHLLFNNAGV 93 (287)
T ss_pred CCCCEEEECCCC
Confidence 368999998875
No 277
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.95 E-value=0.0019 Score=56.30 Aligned_cols=94 Identities=12% Similarity=0.114 Sum_probs=62.3
Q ss_pred hhcCCCCCCEEE----EEc-cCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCc-eEEcCCCCCCccHHHHHHHh
Q 025101 65 RTANVEVGSTVV----IFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDM 138 (258)
Q Consensus 65 ~~~~~~~g~~vl----I~G-~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~i~~~ 138 (258)
...+.++|+++| |+| +|++|.+++|+++..|+ .|+++...+.+....+..+.+ .++|.+. ....+.+...
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~ 102 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKAL 102 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHH
Confidence 445677888887 776 49999999999999999 899887666544433334433 4555554 3333333322
Q ss_pred cCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccC
Q 025101 139 TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 177 (258)
Q Consensus 139 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 177 (258)
. ..+...++.+.++ |+++.++...
T Consensus 103 ~--------------~~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 103 Y--------------EFFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred H--------------HHHHHHHHhccCC-CEEEEEcccc
Confidence 1 1256667777787 8888887543
No 278
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.93 E-value=0.0028 Score=51.69 Aligned_cols=95 Identities=23% Similarity=0.381 Sum_probs=61.3
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc-eE-EcCCCCCCccHHHHHHHhcCCC
Q 025101 69 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF-VNSKNCGDKSVSQIIIDMTDGG 142 (258)
Q Consensus 69 ~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~-~v-i~~~~~~~~~~~~~i~~~~~~~ 142 (258)
..+|++||=.|+|+ |.+++..++ +|+++|++++.++...+.+++ .|.. .+ +.... +.. .+.
T Consensus 159 ~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~----~~~-------~~~ 225 (295)
T PF06325_consen 159 VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE----DLV-------EGK 225 (295)
T ss_dssp SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS----CTC-------CS-
T ss_pred ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec----ccc-------ccc
Confidence 56789999999864 667766666 598899999999987766654 3322 22 21111 111 147
Q ss_pred CCEEEEecCChh---hHHHHHHhhhcCCceEEEecccC
Q 025101 143 ADYCFECVGLAS---LVQEAYACCRKGWGKTIVLGVDQ 177 (258)
Q Consensus 143 ~d~v~d~~g~~~---~~~~~~~~l~~~~G~~v~~g~~~ 177 (258)
||+|+-+.-... ......+.++++ |.+++.|...
T Consensus 226 ~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~ 262 (295)
T PF06325_consen 226 FDLVVANILADVLLELAPDIASLLKPG-GYLILSGILE 262 (295)
T ss_dssp EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred CCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence 999997666543 244556678898 9999988654
No 279
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.93 E-value=0.021 Score=45.78 Aligned_cols=78 Identities=17% Similarity=0.261 Sum_probs=47.3
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCeEEEEcCCc---chHHHH-Hhc-CCc-e--EEcCCCCCCccHHHHHHHhc
Q 025101 71 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS---EKFEIG-KRF-GVT-E--FVNSKNCGDKSVSQIIIDMT 139 (258)
Q Consensus 71 ~g~~vlI~G~---g~~G~~a~~l~~~~g~~~v~~~~~~~---~~~~~~-~~~-g~~-~--vi~~~~~~~~~~~~~i~~~~ 139 (258)
.|++++|+|+ +++|.++++.+...|+ +|+.+.++. ++.+.+ +++ +.. . ..|..+ .++....+.+..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~ 82 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS--DEEITACFETIK 82 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC--HHHHHHHHHHHH
Confidence 4789999986 5999999888888999 898887653 233323 333 211 1 123333 122333333322
Q ss_pred C--CCCCEEEEecC
Q 025101 140 D--GGADYCFECVG 151 (258)
Q Consensus 140 ~--~~~d~v~d~~g 151 (258)
. +.+|+++++.|
T Consensus 83 ~~~g~ld~lv~nag 96 (257)
T PRK08594 83 EEVGVIHGVAHCIA 96 (257)
T ss_pred HhCCCccEEEECcc
Confidence 2 37999998876
No 280
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.93 E-value=0.023 Score=43.77 Aligned_cols=81 Identities=27% Similarity=0.350 Sum_probs=54.6
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEE
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 148 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d 148 (258)
-+|.+++|+|.|.+|..+++.+...|+ +|++.++++++.+.+.+ +|+. .++..+ +.. ..+|+++-
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~---------l~~---~~~Dv~vp 91 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE---------IYS---VDADVFAP 91 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh---------hcc---ccCCEEEe
Confidence 367899999999999999999999999 99999988887766544 4653 333322 111 15888886
Q ss_pred ecCChhhHHHHHHhhh
Q 025101 149 CVGLASLVQEAYACCR 164 (258)
Q Consensus 149 ~~g~~~~~~~~~~~l~ 164 (258)
|......-...++.++
T Consensus 92 ~A~~~~I~~~~~~~l~ 107 (200)
T cd01075 92 CALGGVINDDTIPQLK 107 (200)
T ss_pred cccccccCHHHHHHcC
Confidence 5543332333444453
No 281
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.92 E-value=0.013 Score=47.58 Aligned_cols=95 Identities=20% Similarity=0.269 Sum_probs=65.0
Q ss_pred hcchhhhhhhhhhhhhcCC-CCCCEEEEEccC-HHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCC
Q 025101 51 LLSCGVSTGVGAAWRTANV-EVGSTVVIFGLG-SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD 128 (258)
Q Consensus 51 ~~~~~~~ta~~~l~~~~~~-~~g~~vlI~G~g-~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 128 (258)
.+||.....+. +.+..++ -.|++++|+|.| .+|.-++.++...|+ .|++..+..
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------- 192 (286)
T PRK14175 137 FVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------- 192 (286)
T ss_pred CCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------
Confidence 45554333333 3344433 379999999986 599999999999999 788765421
Q ss_pred ccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccC
Q 025101 129 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 177 (258)
Q Consensus 129 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 177 (258)
.++.+.++ .+|+||.++|.+..+.. +.++++ ..++.+|...
T Consensus 193 ~~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~ 233 (286)
T PRK14175 193 KDMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP 233 (286)
T ss_pred hhHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence 12322232 59999999999874554 457888 8899998653
No 282
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.92 E-value=0.015 Score=45.27 Aligned_cols=104 Identities=20% Similarity=0.247 Sum_probs=63.7
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCceEE-cC------CCCCCccHHHHHHHhc-
Q 025101 69 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFV-NS------KNCGDKSVSQIIIDMT- 139 (258)
Q Consensus 69 ~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~vi-~~------~~~~~~~~~~~i~~~~- 139 (258)
+.++.+||+.|+|. |.-++.+|. .|. .|++++.|+.-.+.+ ++.+..... +. +.....-+...+.++.
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 35778999999985 888888886 699 899999999887764 333321100 00 0000000000011111
Q ss_pred --CCCCCEEEEecCC--------hhhHHHHHHhhhcCCceEEEeccc
Q 025101 140 --DGGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVLGVD 176 (258)
Q Consensus 140 --~~~~d~v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g~~ 176 (258)
.+.+|.|+|+..- +..+..+.+.|+|+ |++++++..
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~~ 154 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITLD 154 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEEE
Confidence 1268999996532 22477899999999 987777643
No 283
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.92 E-value=0.0088 Score=40.06 Aligned_cols=85 Identities=26% Similarity=0.279 Sum_probs=55.2
Q ss_pred EEEEEccCHHHHHHHHHHHHcC---CCeEEEE-cCCcchHHHH-HhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEE
Q 025101 74 TVVIFGLGSIGLAVAEGARLCG---ATRIIGV-DVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 148 (258)
Q Consensus 74 ~vlI~G~g~~G~~a~~l~~~~g---~~~v~~~-~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d 148 (258)
+|.|+|+|.+|.++++-+...| . +|+.+ ++++++.+.+ +++++..+. .+..+.+. ..|+||-
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~-----~advvil 67 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA-------DDNEEAAQ-----EADVVIL 67 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES-------EEHHHHHH-----HTSEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc-------CChHHhhc-----cCCEEEE
Confidence 4778899999999998888888 6 78855 9999888766 557753221 12333333 4899999
Q ss_pred ecCChhhHHHHHHhh---hcCCceEEEe
Q 025101 149 CVGLASLVQEAYACC---RKGWGKTIVL 173 (258)
Q Consensus 149 ~~g~~~~~~~~~~~l---~~~~G~~v~~ 173 (258)
|+.... +...+..+ .++ ..++.+
T Consensus 68 av~p~~-~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 68 AVKPQQ-LPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp -S-GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred EECHHH-HHHHHHHHhhccCC-CEEEEe
Confidence 998776 55444444 344 444443
No 284
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.008 Score=48.06 Aligned_cols=79 Identities=15% Similarity=0.258 Sum_probs=49.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcch-HH-H---HHhcCCc-eEE--cCCCCCCccHHHHHHHhcC-
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FE-I---GKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~-~~-~---~~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~- 140 (258)
+++++||+|+ +++|.++++.+...|+ +|+++++++++ .+ . +++.+.. ..+ |..+ .+++.+.+.+...
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 83 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS--KADLRAAVARTEAE 83 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4789999986 8999999999988999 89998876543 22 2 2333422 122 3322 1223333333221
Q ss_pred -CCCCEEEEecCC
Q 025101 141 -GGADYCFECVGL 152 (258)
Q Consensus 141 -~~~d~v~d~~g~ 152 (258)
+.+|++|.+.|.
T Consensus 84 ~g~id~li~~ag~ 96 (254)
T PRK06114 84 LGALTLAVNAAGI 96 (254)
T ss_pred cCCCCEEEECCCC
Confidence 369999998874
No 285
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.91 E-value=0.0068 Score=48.63 Aligned_cols=76 Identities=20% Similarity=0.257 Sum_probs=48.8
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCceE--EcCCCCCCccHHHHHHHhcC--CCCC
Q 025101 74 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEF--VNSKNCGDKSVSQIIIDMTD--GGAD 144 (258)
Q Consensus 74 ~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~~v--i~~~~~~~~~~~~~i~~~~~--~~~d 144 (258)
++||+|+ +++|.++++.+...|+ +|+++++++++.+.+. +.+.... .|..+ .+++.+.+.+... +++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d--~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD--KDDLKNLVKEAWELLGGID 78 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC--HHHHHHHHHHHHHhcCCCC
Confidence 6899987 8999999988888899 8999999887654432 2232122 23322 1223333333222 3799
Q ss_pred EEEEecCC
Q 025101 145 YCFECVGL 152 (258)
Q Consensus 145 ~v~d~~g~ 152 (258)
++|.+.|.
T Consensus 79 ~li~naG~ 86 (259)
T PRK08340 79 ALVWNAGN 86 (259)
T ss_pred EEEECCCC
Confidence 99998874
No 286
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.0067 Score=48.56 Aligned_cols=79 Identities=19% Similarity=0.203 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh---cCCc-eE--EcCCCCCCccHHHHHHHhcC--C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT-EF--VNSKNCGDKSVSQIIIDMTD--G 141 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~---~g~~-~v--i~~~~~~~~~~~~~i~~~~~--~ 141 (258)
+|+++||+|+ |++|..+++.+...|+ +|+++++++++.+..++ .+.. .+ .|..+ .+++...+.+... +
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 82 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD--DAQCRDAVEQTVAKFG 82 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhcC
Confidence 4789999987 8999999888888899 88888888876644433 3322 12 23322 1223333333322 3
Q ss_pred CCCEEEEecCC
Q 025101 142 GADYCFECVGL 152 (258)
Q Consensus 142 ~~d~v~d~~g~ 152 (258)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (258)
T PRK08628 83 RIDGLVNNAGV 93 (258)
T ss_pred CCCEEEECCcc
Confidence 79999999883
No 287
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.0061 Score=48.82 Aligned_cols=79 Identities=19% Similarity=0.244 Sum_probs=50.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHH----HHhcCCce---EEcCCCCCCcc-HHHHHHHhcC-
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFGVTE---FVNSKNCGDKS-VSQIIIDMTD- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~----~~~~g~~~---vi~~~~~~~~~-~~~~i~~~~~- 140 (258)
++++++|+|+ |++|..+++.+...|+.+|+++++++++.+. +++.+... ..|..+ ++ +.+.+.....
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~ 81 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD---VEDCRRVVAAADEA 81 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC---HHHHHHHHHHHHHH
Confidence 5688999987 8999999999988999339999988765542 23344321 224333 33 2222222211
Q ss_pred -CCCCEEEEecCC
Q 025101 141 -GGADYCFECVGL 152 (258)
Q Consensus 141 -~~~d~v~d~~g~ 152 (258)
+++|.+|.+.|.
T Consensus 82 ~g~id~li~~ag~ 94 (260)
T PRK06198 82 FGRLDALVNAAGL 94 (260)
T ss_pred hCCCCEEEECCCc
Confidence 269999998874
No 288
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.89 E-value=0.007 Score=48.38 Aligned_cols=79 Identities=24% Similarity=0.326 Sum_probs=51.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCc-eEE--cCCCCCCccHHHHHHHhc--C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMT--D 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~-~vi--~~~~~~~~~~~~~i~~~~--~ 140 (258)
+|+++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ++.|.. ..+ |..+ .+++...+.+.. -
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 5789999986 9999999998888899 899999887665432 223322 122 3333 122322233222 1
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+.+|++|.+.|.
T Consensus 86 ~~~d~li~~ag~ 97 (255)
T PRK07523 86 GPIDILVNNAGM 97 (255)
T ss_pred CCCCEEEECCCC
Confidence 269999998874
No 289
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.0065 Score=48.74 Aligned_cols=79 Identities=20% Similarity=0.257 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hc-----CCc-eE--EcCCCCCCccHHHHHHHhcC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----GVT-EF--VNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~-----g~~-~v--i~~~~~~~~~~~~~i~~~~~ 140 (258)
+++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+. ++ +.. .+ .|..+ .+++...+.+...
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 82 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD--AASVAAAVAAAEE 82 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence 4789999987 8999999998888999 8999998877655432 22 211 11 23322 1223333332221
Q ss_pred --CCCCEEEEecCC
Q 025101 141 --GGADYCFECVGL 152 (258)
Q Consensus 141 --~~~d~v~d~~g~ 152 (258)
+.+|++|.+.|.
T Consensus 83 ~~g~id~li~~ag~ 96 (260)
T PRK07063 83 AFGPLDVLVNNAGI 96 (260)
T ss_pred HhCCCcEEEECCCc
Confidence 379999998873
No 290
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.011 Score=47.44 Aligned_cols=77 Identities=22% Similarity=0.258 Sum_probs=50.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-----cCCc-eE--EcCCCCCCccHHHHHHHhcCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVT-EF--VNSKNCGDKSVSQIIIDMTDG 141 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-----~g~~-~v--i~~~~~~~~~~~~~i~~~~~~ 141 (258)
++++++|+|+ +++|..+++.+...|+ +|+++++++++.+.+.+ .+.. .+ .|..+ ++-.+.+.+.. +
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~---~~~~~~~~~~~-g 80 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS---PEAREQLAAEA-G 80 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC---HHHHHHHHHHh-C
Confidence 4789999987 8999999998888999 99999998876654322 2322 12 23322 22222222222 3
Q ss_pred CCCEEEEecCC
Q 025101 142 GADYCFECVGL 152 (258)
Q Consensus 142 ~~d~v~d~~g~ 152 (258)
.+|.+|.+.|.
T Consensus 81 ~id~lv~~ag~ 91 (259)
T PRK06125 81 DIDILVNNAGA 91 (259)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 291
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.88 E-value=0.0072 Score=48.32 Aligned_cols=79 Identities=23% Similarity=0.339 Sum_probs=49.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcch--HHHHHhcCCce---EEcCCCCCCccHHHHHHHhcC--CC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVTE---FVNSKNCGDKSVSQIIIDMTD--GG 142 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~--~~~~~~~g~~~---vi~~~~~~~~~~~~~i~~~~~--~~ 142 (258)
+|+++||+|+ +++|.++++.+...|+ +|+++++++.. .+.+++.+... ..|..+ .+++.+.+.+... ++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ--QKDIDSIVSQAVEVMGH 83 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC--HHHHHHHHHHHHHHcCC
Confidence 5789999987 8999999998888999 89888765422 22334445321 234333 1233333333221 36
Q ss_pred CCEEEEecCC
Q 025101 143 ADYCFECVGL 152 (258)
Q Consensus 143 ~d~v~d~~g~ 152 (258)
+|+++.+.|.
T Consensus 84 iD~lv~~ag~ 93 (251)
T PRK12481 84 IDILINNAGI 93 (251)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 292
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0067 Score=50.26 Aligned_cols=40 Identities=28% Similarity=0.285 Sum_probs=34.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHH
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 111 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~ 111 (258)
+|++++|+|+ +++|.++++.+...|+ +|++++|+.++.+.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~ 53 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEA 53 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence 4789999987 8999999888888899 89999998876543
No 293
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.88 E-value=0.0067 Score=48.78 Aligned_cols=78 Identities=24% Similarity=0.284 Sum_probs=47.6
Q ss_pred CCCEEEEEcc-C--HHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCceE--EcCCCCCCccHHHHHHHhcC-
Q 025101 71 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEF--VNSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g--~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~~v--i~~~~~~~~~~~~~i~~~~~- 140 (258)
+|+.++|+|+ + ++|.++++.+...|+ +|+..+++++..+.++ +.|...+ .|-.+ .++....+.+...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~--~~~v~~~~~~~~~~ 83 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN--PKSISNLFDDIKEK 83 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC--HHHHHHHHHHHHHH
Confidence 5788999987 4 799999888888899 8988877643222222 2343222 24333 1223333333222
Q ss_pred -CCCCEEEEecC
Q 025101 141 -GGADYCFECVG 151 (258)
Q Consensus 141 -~~~d~v~d~~g 151 (258)
+.+|+++++.|
T Consensus 84 ~g~iDilVnnag 95 (260)
T PRK06603 84 WGSFDFLLHGMA 95 (260)
T ss_pred cCCccEEEEccc
Confidence 36999998876
No 294
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.022 Score=46.64 Aligned_cols=80 Identities=20% Similarity=0.133 Sum_probs=48.2
Q ss_pred CCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcch-HHH----HHhcCCce-E--EcCCCCCCccHHHHHHHhcC
Q 025101 70 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEI----GKRFGVTE-F--VNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 70 ~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~-~~~----~~~~g~~~-v--i~~~~~~~~~~~~~i~~~~~ 140 (258)
-+++++||+|+ |++|..+++.+...|+ +|+++.+++++ .+. ++..|... + .|..+ .+.+.+.+.+...
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~i~~ 120 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD--EAFCKDAVEETVR 120 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHH
Confidence 35789999987 8999999888888899 89888876532 222 22234322 2 23222 1222222322211
Q ss_pred --CCCCEEEEecCC
Q 025101 141 --GGADYCFECVGL 152 (258)
Q Consensus 141 --~~~d~v~d~~g~ 152 (258)
+.+|++|.+.|.
T Consensus 121 ~~~~iD~lI~~Ag~ 134 (290)
T PRK06701 121 ELGRLDILVNNAAF 134 (290)
T ss_pred HcCCCCEEEECCcc
Confidence 268999988764
No 295
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.86 E-value=0.02 Score=45.12 Aligned_cols=35 Identities=26% Similarity=0.299 Sum_probs=30.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 105 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~ 105 (258)
.+.+|+|.|+|++|..++..+...|..+++.+|.+
T Consensus 20 ~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D 54 (228)
T cd00757 20 KNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD 54 (228)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 35799999999999999999999999888888543
No 296
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0074 Score=48.87 Aligned_cols=78 Identities=21% Similarity=0.321 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-Hh---cC--Cc-eEE--cCCCCCCccHHHHHHHhcC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KR---FG--VT-EFV--NSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~---~g--~~-~vi--~~~~~~~~~~~~~i~~~~~ 140 (258)
+++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.. ++ .+ .. .++ |..+ ++++...+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 82 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD--EDQVARAVDAATA 82 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC--HHHHHHHHHHHHH
Confidence 4689999997 8999999999988999 899999887665433 22 11 11 122 3322 1223333333221
Q ss_pred --CCCCEEEEecC
Q 025101 141 --GGADYCFECVG 151 (258)
Q Consensus 141 --~~~d~v~d~~g 151 (258)
+++|++|.+.|
T Consensus 83 ~~~~~d~li~~ag 95 (276)
T PRK05875 83 WHGRLHGVVHCAG 95 (276)
T ss_pred HcCCCCEEEECCC
Confidence 26899999886
No 297
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.86 E-value=0.013 Score=46.22 Aligned_cols=100 Identities=20% Similarity=0.217 Sum_probs=58.3
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcc-------------------hHH----HHHhcCCc-eEEcCCCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------KFE----IGKRFGVT-EFVNSKNC 126 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~-------------------~~~----~~~~~g~~-~vi~~~~~ 126 (258)
.+.+|+|+|+|++|..++..+...|..+++.+|...= |.+ .++++... .+....+
T Consensus 10 ~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~- 88 (231)
T cd00755 10 RNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE- 88 (231)
T ss_pred hCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee-
Confidence 3568999999999999999998899988888875431 111 12222221 1211111
Q ss_pred CCccHH-HHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEec
Q 025101 127 GDKSVS-QIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 127 ~~~~~~-~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 174 (258)
.+. +.+.++...++|+|+||+.+...-..+.+.+...+=.++..+
T Consensus 89 ---~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~ 134 (231)
T cd00755 89 ---FLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSM 134 (231)
T ss_pred ---ecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 111 223333333699999999887644444455554413455444
No 298
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.86 E-value=0.0052 Score=49.18 Aligned_cols=78 Identities=17% Similarity=0.234 Sum_probs=49.0
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCc--eE--EcCCCCCCccHHHHHHHhcC--C
Q 025101 71 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EF--VNSKNCGDKSVSQIIIDMTD--G 141 (258)
Q Consensus 71 ~g~~vlI~G~---g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~--~v--i~~~~~~~~~~~~~i~~~~~--~ 141 (258)
.|++++|+|+ +++|.++++.+...|+ +|+++.++++..+.++++... .. .|..+ .++..+.+.+... +
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~g 82 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS--DESIERAFATIKERVG 82 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC--HHHHHHHHHHHHHHhC
Confidence 5789999986 4899999888888899 899988875434444443211 12 23322 1223333333221 3
Q ss_pred CCCEEEEecC
Q 025101 142 GADYCFECVG 151 (258)
Q Consensus 142 ~~d~v~d~~g 151 (258)
.+|+++++.|
T Consensus 83 ~iD~lv~nAg 92 (252)
T PRK06079 83 KIDGIVHAIA 92 (252)
T ss_pred CCCEEEEccc
Confidence 6999999876
No 299
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.86 E-value=0.016 Score=42.01 Aligned_cols=32 Identities=28% Similarity=0.453 Sum_probs=28.0
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025101 74 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 105 (258)
Q Consensus 74 ~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~ 105 (258)
+|+|+|+|++|..+++.+...|.+++..++..
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48899999999999999999999888888754
No 300
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0077 Score=48.51 Aligned_cols=78 Identities=21% Similarity=0.290 Sum_probs=50.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCc-e--EEcCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-E--FVNSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~-~--vi~~~~~~~~~~~~~i~~~~~-- 140 (258)
+++++||+|+ |++|..+++.+...|+ +|+++++++++.+.. .+.+.. . ..|..+ .+++...+.+...
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD--YAAVEAAFAQIADEF 84 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 5789999987 8999999998888999 899999887665433 222322 1 123333 1223333333321
Q ss_pred CCCCEEEEecC
Q 025101 141 GGADYCFECVG 151 (258)
Q Consensus 141 ~~~d~v~d~~g 151 (258)
+++|++|.+.|
T Consensus 85 ~~iD~vi~~ag 95 (264)
T PRK07576 85 GPIDVLVSGAA 95 (264)
T ss_pred CCCCEEEECCC
Confidence 26899998775
No 301
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]
Probab=96.85 E-value=0.0071 Score=46.36 Aligned_cols=95 Identities=18% Similarity=0.115 Sum_probs=71.6
Q ss_pred hcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCC
Q 025101 66 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GAD 144 (258)
Q Consensus 66 ~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d 144 (258)
+..+..-..|.=+|||+ |...-.|++.+.-..+.++++|++..+.+++...+..+... .++.+++. ..|
T Consensus 25 ~Vp~~~~~~v~DLGCGp-GnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f~~a---------Dl~~w~p~~~~d 94 (257)
T COG4106 25 RVPLERPRRVVDLGCGP-GNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATFEEA---------DLRTWKPEQPTD 94 (257)
T ss_pred hCCccccceeeecCCCC-CHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCceecc---------cHhhcCCCCccc
Confidence 34556677888889987 88999999988654999999999999988876654433332 36777777 899
Q ss_pred EEEEecCC------hhhHHHHHHhhhcCCceEE
Q 025101 145 YCFECVGL------ASLVQEAYACCRKGWGKTI 171 (258)
Q Consensus 145 ~v~d~~g~------~~~~~~~~~~l~~~~G~~v 171 (258)
++|.+..- ...+...+..|+|+ |.+.
T Consensus 95 llfaNAvlqWlpdH~~ll~rL~~~L~Pg-g~LA 126 (257)
T COG4106 95 LLFANAVLQWLPDHPELLPRLVSQLAPG-GVLA 126 (257)
T ss_pred hhhhhhhhhhccccHHHHHHHHHhhCCC-ceEE
Confidence 99854432 34588999999998 8764
No 302
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.85 E-value=0.0073 Score=48.62 Aligned_cols=79 Identities=22% Similarity=0.352 Sum_probs=47.9
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCceE--EcCCCCCCccHHHHHHHhcC-
Q 025101 71 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEF--VNSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 71 ~g~~vlI~G~---g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~v--i~~~~~~~~~~~~~i~~~~~- 140 (258)
+|+.+||+|+ +++|.+.++.+...|+ +|+.+.+.+...+.+++ .|.... .|-.+ .++....+.+...
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 81 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS--DDEINQVFADLGKH 81 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC--HHHHHHHHHHHHHH
Confidence 5789999983 5899999988888999 88887665433333332 342222 23322 2233333333222
Q ss_pred -CCCCEEEEecCC
Q 025101 141 -GGADYCFECVGL 152 (258)
Q Consensus 141 -~~~d~v~d~~g~ 152 (258)
+++|+++++.|.
T Consensus 82 ~g~iD~lVnnAG~ 94 (261)
T PRK08690 82 WDGLDGLVHSIGF 94 (261)
T ss_pred hCCCcEEEECCcc
Confidence 379999998763
No 303
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.85 E-value=0.011 Score=49.37 Aligned_cols=36 Identities=28% Similarity=0.294 Sum_probs=31.3
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 106 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~ 106 (258)
.+.+|+|+|+|++|..+++.+...|..++.++|.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 457899999999999999999999988888888753
No 304
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0084 Score=47.23 Aligned_cols=78 Identities=12% Similarity=0.060 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCce-EE--cCCCCCCccHHHHHH---Hhc
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIII---DMT 139 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-vi--~~~~~~~~~~~~~i~---~~~ 139 (258)
+|++++|+|+ +++|.+.+..+...|+ +|+++.+++++.+.+ ++.+... .+ |..+ .+++.+.+. +..
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS--QESIRHLFDAIEQQF 80 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4789999987 7999998888888899 899999888776543 2334321 22 3222 122322233 222
Q ss_pred CCCCCEEEEecC
Q 025101 140 DGGADYCFECVG 151 (258)
Q Consensus 140 ~~~~d~v~d~~g 151 (258)
++.+|++|.+.|
T Consensus 81 g~~iD~li~nag 92 (227)
T PRK08862 81 NRAPDVLVNNWT 92 (227)
T ss_pred CCCCCEEEECCc
Confidence 326999999886
No 305
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0079 Score=48.83 Aligned_cols=79 Identities=24% Similarity=0.276 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCce-E--EcCCCCCCccHHHHHHHhc--C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMT--D 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~i~~~~--~ 140 (258)
+|+++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ +..|... . .|..+ .+++.+.+.+.. -
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH--REEVTHLADEAFRLL 81 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHHc
Confidence 4788999986 8999999998888999 899998887665533 2234321 1 23322 122222222221 1
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+.+|++|++.|.
T Consensus 82 g~id~li~nAg~ 93 (275)
T PRK05876 82 GHVDVVFSNAGI 93 (275)
T ss_pred CCCCEEEECCCc
Confidence 369999998873
No 306
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0095 Score=47.16 Aligned_cols=80 Identities=20% Similarity=0.231 Sum_probs=51.6
Q ss_pred CCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc-eE--EcCCCCCCccHHHHHHHhcC-
Q 025101 70 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 70 ~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~-~v--i~~~~~~~~~~~~~i~~~~~- 140 (258)
.++++++|+|+ |.+|..++..+...|+ +|+++++++++.+.+.+ .+.. .+ .|..+ .+++...+.+...
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 80 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN--PEAIAPGIAELLEQ 80 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 34678999986 9999999999888899 89999998876554322 2222 12 23322 1233233333221
Q ss_pred -CCCCEEEEecCC
Q 025101 141 -GGADYCFECVGL 152 (258)
Q Consensus 141 -~~~d~v~d~~g~ 152 (258)
+++|.+|.+.|.
T Consensus 81 ~~~id~lv~~ag~ 93 (241)
T PRK07454 81 FGCPDVLINNAGM 93 (241)
T ss_pred cCCCCEEEECCCc
Confidence 269999998874
No 307
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=96.84 E-value=0.011 Score=47.04 Aligned_cols=101 Identities=16% Similarity=0.270 Sum_probs=68.2
Q ss_pred hcCCCCCCEEEEEccCHHHHHHHHHHHHc--CCCeEEEEcCCcchHHHHH----hcCCceEEcCCCCCCccHHHHHHHhc
Q 025101 66 TANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMT 139 (258)
Q Consensus 66 ~~~~~~g~~vlI~G~g~~G~~a~~l~~~~--g~~~v~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~i~~~~ 139 (258)
..+....++||-+|.+ +|..++.+++.+ +. +|+.++.++++.+.++ +.|...-|.... .+..+.+.++.
T Consensus 74 l~~~~~ak~iLEiGT~-~GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~---G~a~e~L~~l~ 148 (247)
T PLN02589 74 LLKLINAKNTMEIGVY-TGYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFRE---GPALPVLDQMI 148 (247)
T ss_pred HHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---ccHHHHHHHHH
Confidence 3445566899999974 588888888876 34 8999999998877664 456333233333 44555555542
Q ss_pred -----CCCCCEEE-EecC--ChhhHHHHHHhhhcCCceEEE
Q 025101 140 -----DGGADYCF-ECVG--LASLVQEAYACCRKGWGKTIV 172 (258)
Q Consensus 140 -----~~~~d~v~-d~~g--~~~~~~~~~~~l~~~~G~~v~ 172 (258)
.+.||.|| |+-- ....++.+++.++++ |.++.
T Consensus 149 ~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 149 EDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred hccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 24799998 6543 233477889999998 88764
No 308
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.01 Score=47.62 Aligned_cols=77 Identities=19% Similarity=0.219 Sum_probs=51.2
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cC-Cc-e--EEcCCCCCCccHHHHHHHhc---CCCC
Q 025101 73 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FG-VT-E--FVNSKNCGDKSVSQIIIDMT---DGGA 143 (258)
Q Consensus 73 ~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g-~~-~--vi~~~~~~~~~~~~~i~~~~---~~~~ 143 (258)
+++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ .+ .. . ..|..+ .+++.+.+.+.. .+++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 47899987 8999999998888899 89999998887665533 32 11 1 234433 122333333321 3479
Q ss_pred CEEEEecCC
Q 025101 144 DYCFECVGL 152 (258)
Q Consensus 144 d~v~d~~g~ 152 (258)
|+++.+.|.
T Consensus 79 d~vi~~ag~ 87 (260)
T PRK08267 79 DVLFNNAGI 87 (260)
T ss_pred CEEEECCCC
Confidence 999998875
No 309
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.84 E-value=0.017 Score=49.11 Aligned_cols=35 Identities=23% Similarity=0.246 Sum_probs=31.5
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 105 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~ 105 (258)
.+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999889998876
No 310
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=96.83 E-value=0.011 Score=44.81 Aligned_cols=94 Identities=14% Similarity=0.141 Sum_probs=58.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCceEEcCCCCCCccHHHHHHHhcCCCCCEE
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYC 146 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v 146 (258)
++++||-+|+|. |..++.+++.....+|++++.+++..+.++ +.+.+.+ .... .+..+ +. ..+.+|+|
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~---~d~~~-~~--~~~~fD~I 113 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVN---GRAED-FQ--HEEQFDVI 113 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEe---cchhh-cc--ccCCccEE
Confidence 388999999864 666667666554338999999988766554 3554322 1111 12221 11 12379999
Q ss_pred EEec-CC-hhhHHHHHHhhhcCCceEEEe
Q 025101 147 FECV-GL-ASLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 147 ~d~~-g~-~~~~~~~~~~l~~~~G~~v~~ 173 (258)
+-.. .. +..++.+.+.++++ |+++..
T Consensus 114 ~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 114 TSRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred EehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 8532 22 33466778889999 998865
No 311
>PRK08643 acetoin reductase; Validated
Probab=96.83 E-value=0.0079 Score=48.08 Aligned_cols=78 Identities=18% Similarity=0.242 Sum_probs=49.8
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCce-E--EcCCCCCCccHHHHHHHhcC--C
Q 025101 72 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-F--VNSKNCGDKSVSQIIIDMTD--G 141 (258)
Q Consensus 72 g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~~-v--i~~~~~~~~~~~~~i~~~~~--~ 141 (258)
++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+. +.+... . .|..+ ++.+.+.+.+... +
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 578999986 8999999999988999 8999998876654432 223221 1 23322 1222222322211 3
Q ss_pred CCCEEEEecCC
Q 025101 142 GADYCFECVGL 152 (258)
Q Consensus 142 ~~d~v~d~~g~ 152 (258)
++|++|.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (256)
T PRK08643 79 DLNVVVNNAGV 89 (256)
T ss_pred CCCEEEECCCC
Confidence 69999998864
No 312
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.034 Score=44.00 Aligned_cols=79 Identities=16% Similarity=0.111 Sum_probs=47.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcch-HH----HHHhcCCc-eEE--cCCCCCCccHHHHHHHhc--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FE----IGKRFGVT-EFV--NSKNCGDKSVSQIIIDMT-- 139 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~-~~----~~~~~g~~-~vi--~~~~~~~~~~~~~i~~~~-- 139 (258)
++++++|+|+ |++|..+++.+...|+ +|+.+.++.+. .+ .+++.+.. .++ |..+ .+++.+.+.+..
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD--AAAVTRLFDAAETA 80 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHH
Confidence 5689999986 9999999999988999 77776654332 22 22233422 222 2222 122333333221
Q ss_pred CCCCCEEEEecCC
Q 025101 140 DGGADYCFECVGL 152 (258)
Q Consensus 140 ~~~~d~v~d~~g~ 152 (258)
-+++|++|.+.|.
T Consensus 81 ~~~id~vi~~ag~ 93 (245)
T PRK12937 81 FGRIDVLVNNAGV 93 (245)
T ss_pred cCCCCEEEECCCC
Confidence 1369999998874
No 313
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.83 E-value=0.0096 Score=48.26 Aligned_cols=93 Identities=15% Similarity=0.088 Sum_probs=59.6
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcC---CceEEcCCCCCCccHHHHHHHhcCCCCC
Q 025101 69 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG---VTEFVNSKNCGDKSVSQIIIDMTDGGAD 144 (258)
Q Consensus 69 ~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g---~~~vi~~~~~~~~~~~~~i~~~~~~~~d 144 (258)
..++++++|+|+|++|.+++..+...|+ +|+++.+++++.+.+ +++. ....+... +.....+|
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~------------~~~~~~~D 180 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSMD------------ELPLHRVD 180 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEechh------------hhcccCcc
Confidence 3457899999999999999888888898 899999988775543 3332 21222111 11112699
Q ss_pred EEEEecCChh--hH---HHHHHhhhcCCceEEEecc
Q 025101 145 YCFECVGLAS--LV---QEAYACCRKGWGKTIVLGV 175 (258)
Q Consensus 145 ~v~d~~g~~~--~~---~~~~~~l~~~~G~~v~~g~ 175 (258)
+||+|++... .. ......++++ ..++.+..
T Consensus 181 ivInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y 215 (270)
T TIGR00507 181 LIINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY 215 (270)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence 9999998632 01 1123456666 67777753
No 314
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.009 Score=47.65 Aligned_cols=78 Identities=26% Similarity=0.308 Sum_probs=50.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCc-eE--EcCCCCCCccHHH---HHHHhc
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQ---IIIDMT 139 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~-~v--i~~~~~~~~~~~~---~i~~~~ 139 (258)
++++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++.+.. .. .|..+ .+++.. .+.+..
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR--DAEVKALVEQTIAAY 82 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 4789999987 8999999888888899 899999987764432 233422 12 22222 122222 222222
Q ss_pred CCCCCEEEEecCC
Q 025101 140 DGGADYCFECVGL 152 (258)
Q Consensus 140 ~~~~d~v~d~~g~ 152 (258)
+.+|++|.+.|.
T Consensus 83 -g~id~li~~ag~ 94 (253)
T PRK06172 83 -GRLDYAFNNAGI 94 (253)
T ss_pred -CCCCEEEECCCC
Confidence 368999998874
No 315
>PRK05717 oxidoreductase; Validated
Probab=96.83 E-value=0.0084 Score=47.96 Aligned_cols=79 Identities=18% Similarity=0.208 Sum_probs=50.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHH-HHhcCCc-e--EEcCCCCCCccHHHHHHHhcC--CCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVT-E--FVNSKNCGDKSVSQIIIDMTD--GGA 143 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~-~~~~g~~-~--vi~~~~~~~~~~~~~i~~~~~--~~~ 143 (258)
+|++++|+|+ |.+|..+++.+...|+ +|++++++.++.+. .++++.. . ..|..+ .+++.+.+.+... +.+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD--EAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 4789999986 8999999888888899 89999887665443 3444422 1 223332 1222222333222 269
Q ss_pred CEEEEecCC
Q 025101 144 DYCFECVGL 152 (258)
Q Consensus 144 d~v~d~~g~ 152 (258)
|++|.+.|.
T Consensus 86 d~li~~ag~ 94 (255)
T PRK05717 86 DALVCNAAI 94 (255)
T ss_pred CEEEECCCc
Confidence 999998873
No 316
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.83 E-value=0.0085 Score=49.41 Aligned_cols=96 Identities=13% Similarity=0.032 Sum_probs=65.6
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHH-HcCCCeEEEEcCCcchHHH-HHhcCCc--eEEcCCCCCCccHHHHHHHhcCCCCC
Q 025101 69 VEVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEI-GKRFGVT--EFVNSKNCGDKSVSQIIIDMTDGGAD 144 (258)
Q Consensus 69 ~~~g~~vlI~G~g~~G~~a~~l~~-~~g~~~v~~~~~~~~~~~~-~~~~g~~--~vi~~~~~~~~~~~~~i~~~~~~~~d 144 (258)
.....+++|+|+|..|.+.++.+. ..+.++|.+..+++++.+. +.++... .+. . .+..+.+. ++|
T Consensus 122 ~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~-----~~~~~av~-----~aD 190 (304)
T PRK07340 122 PAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P-----LDGEAIPE-----AVD 190 (304)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E-----CCHHHHhh-----cCC
Confidence 346679999999999998888776 4687789999999887654 4444311 111 1 22333332 699
Q ss_pred EEEEecCChhhHHHHHHhhhcCCceEEEecccCC
Q 025101 145 YCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 178 (258)
Q Consensus 145 ~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 178 (258)
+|+.|+++..-+-.. .++|+ -++..+|....
T Consensus 191 iVitaT~s~~Pl~~~--~~~~g-~hi~~iGs~~p 221 (304)
T PRK07340 191 LVVTATTSRTPVYPE--AARAG-RLVVAVGAFTP 221 (304)
T ss_pred EEEEccCCCCceeCc--cCCCC-CEEEecCCCCC
Confidence 999999876533333 37888 88999986644
No 317
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.82 E-value=0.0093 Score=54.61 Aligned_cols=78 Identities=27% Similarity=0.282 Sum_probs=52.7
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcc---------------------hHHHHHhcCCceEEcCCCCCC
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCGD 128 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~---------------------~~~~~~~~g~~~vi~~~~~~~ 128 (258)
..+++|+|+|+|+.|+.++..++..|+ +|+++++.+. ..+.++++|++...+..-..+
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 468899999999999999999999999 8999987543 244566778653333211000
Q ss_pred ccHHHHHHHhcCCCCCEEEEecCCh
Q 025101 129 KSVSQIIIDMTDGGADYCFECVGLA 153 (258)
Q Consensus 129 ~~~~~~i~~~~~~~~d~v~d~~g~~ 153 (258)
-.+ +.+. .++|.||.++|..
T Consensus 404 i~~-~~~~----~~~DavilAtGa~ 423 (654)
T PRK12769 404 ISL-ESLL----EDYDAVFVGVGTY 423 (654)
T ss_pred CCH-HHHH----hcCCEEEEeCCCC
Confidence 111 1111 1699999998863
No 318
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.82 E-value=0.0088 Score=48.20 Aligned_cols=80 Identities=15% Similarity=0.220 Sum_probs=50.9
Q ss_pred CCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcch----HHHHHhcC-Cc-eEEcCCCCCCccHHHHHHHhcCC-
Q 025101 70 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK----FEIGKRFG-VT-EFVNSKNCGDKSVSQIIIDMTDG- 141 (258)
Q Consensus 70 ~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~----~~~~~~~g-~~-~vi~~~~~~~~~~~~~i~~~~~~- 141 (258)
-+|+.|||+|+ +++|.+.++=...+|+ +++.++.+++- .+.+++.| +. .+.|-.+ .+++....++...+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKKEV 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHHhc
Confidence 36999999987 6999887666666788 88888877654 33445555 21 2334433 23444333333222
Q ss_pred -CCCEEEEecCC
Q 025101 142 -GADYCFECVGL 152 (258)
Q Consensus 142 -~~d~v~d~~g~ 152 (258)
.+|+++++.|-
T Consensus 113 G~V~ILVNNAGI 124 (300)
T KOG1201|consen 113 GDVDILVNNAGI 124 (300)
T ss_pred CCceEEEecccc
Confidence 79999998875
No 319
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.0041 Score=50.17 Aligned_cols=77 Identities=22% Similarity=0.261 Sum_probs=50.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCce-EEcCCCCCCccHHHHHHHhcC--CCCCEE
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC 146 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~v 146 (258)
.+++++|+|+ |++|..+++.+...|+ +|+++++++++.+.. .+... ..|..+ .+++.+.+.+... +.+|++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d--~~~~~~~~~~~~~~~g~~d~l 77 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTD--DASVQAAVDEVIARAGRIDVL 77 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCC--HHHHHHHHHHHHHhCCCCCEE
Confidence 3568999987 8999999888888899 899999886554322 12221 223333 2333333333322 269999
Q ss_pred EEecCC
Q 025101 147 FECVGL 152 (258)
Q Consensus 147 ~d~~g~ 152 (258)
|.+.|.
T Consensus 78 i~~ag~ 83 (270)
T PRK06179 78 VNNAGV 83 (270)
T ss_pred EECCCC
Confidence 999884
No 320
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.0084 Score=47.82 Aligned_cols=78 Identities=17% Similarity=0.195 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc-eEE--cCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 140 (258)
+++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+.+ .+.. ..+ |..+ .++..+.+.+...
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE--MEQIDALFAHIRERH 83 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4678999986 8999999999988999 99999988766544322 2322 222 3332 1222222332221
Q ss_pred CCCCEEEEecC
Q 025101 141 GGADYCFECVG 151 (258)
Q Consensus 141 ~~~d~v~d~~g 151 (258)
+.+|+++.+.|
T Consensus 84 ~~id~li~~ag 94 (252)
T PRK07035 84 GRLDILVNNAA 94 (252)
T ss_pred CCCCEEEECCC
Confidence 26999998886
No 321
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.81 E-value=0.01 Score=46.94 Aligned_cols=79 Identities=23% Similarity=0.298 Sum_probs=51.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCce-E--EcCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~i~~~~~-- 140 (258)
+++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +..+... + .|..+ ++.+.+.+.+...
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAF 80 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 3578999997 9999999998888899 799999988775443 2334322 2 23333 1223333333221
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+.+|.++.+.|.
T Consensus 81 ~~id~vi~~ag~ 92 (246)
T PRK05653 81 GALDILVNNAGI 92 (246)
T ss_pred CCCCEEEECCCc
Confidence 268999998864
No 322
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.81 E-value=0.021 Score=43.73 Aligned_cols=76 Identities=26% Similarity=0.307 Sum_probs=50.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-c----CCce-EEcCCCCCCccHHHHHHHhcCCCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVTE-FVNSKNCGDKSVSQIIIDMTDGGA 143 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~----g~~~-vi~~~~~~~~~~~~~i~~~~~~~~ 143 (258)
++.+++|+|+ |.+|..++..+...|. +|+++.|+.++.+.+.+ + +... ..+..+ .+++.+.+ . ++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~----~-~~ 98 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD--DAARAAAI----K-GA 98 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC--HHHHHHHH----h-cC
Confidence 5789999986 9999998888888888 89999998877655432 2 3221 122222 01222222 1 68
Q ss_pred CEEEEecCChh
Q 025101 144 DYCFECVGLAS 154 (258)
Q Consensus 144 d~v~d~~g~~~ 154 (258)
|+||.+++...
T Consensus 99 diVi~at~~g~ 109 (194)
T cd01078 99 DVVFAAGAAGV 109 (194)
T ss_pred CEEEECCCCCc
Confidence 99999887655
No 323
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.0094 Score=47.86 Aligned_cols=78 Identities=21% Similarity=0.302 Sum_probs=49.8
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCce-E--EcCCCCCCccHHHHHHHhcC--C
Q 025101 72 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMTD--G 141 (258)
Q Consensus 72 g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~i~~~~~--~ 141 (258)
+.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ +..+... + .|..+ .+.+...+.+... +
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 77 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD--AEACERLIEAAVARFG 77 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence 357999987 9999999998888899 899999987665433 2234322 1 23222 1223333333221 2
Q ss_pred CCCEEEEecCC
Q 025101 142 GADYCFECVGL 152 (258)
Q Consensus 142 ~~d~v~d~~g~ 152 (258)
++|+||.+.|.
T Consensus 78 ~id~vi~~ag~ 88 (263)
T PRK06181 78 GIDILVNNAGI 88 (263)
T ss_pred CCCEEEECCCc
Confidence 69999998764
No 324
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.80 E-value=0.014 Score=46.33 Aligned_cols=35 Identities=29% Similarity=0.391 Sum_probs=30.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 105 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~ 105 (258)
.+.+|+|.|+|++|..+++.+...|..+++.+|.+
T Consensus 23 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 23 KASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 35789999999999999999999999888887654
No 325
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.80 E-value=0.0092 Score=47.82 Aligned_cols=79 Identities=20% Similarity=0.372 Sum_probs=51.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc-eE--EcCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~-~v--i~~~~~~~~~~~~~i~~~~~-- 140 (258)
+++++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+. +.+.. .+ .|..+ .+++.+.+.++..
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d--~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD--EADIERLAEETLERF 87 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 5789999986 9999999998888999 8999999887765443 22322 12 23332 1223222222221
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+++|.+|.+.|.
T Consensus 88 ~~id~vi~~ag~ 99 (259)
T PRK08213 88 GHVDILVNNAGA 99 (259)
T ss_pred CCCCEEEECCCC
Confidence 269999998774
No 326
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=96.80 E-value=0.019 Score=46.12 Aligned_cols=96 Identities=23% Similarity=0.144 Sum_probs=67.5
Q ss_pred hhhcCCCCCCEEEEEccCHHHHHHHHHHHHc-CCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcC-C
Q 025101 64 WRTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD-G 141 (258)
Q Consensus 64 ~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~-g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~-~ 141 (258)
.......++++||-+|+|. |..+..+++.. +. +|++++.++...+.+++.+.+ ++. .+. .++.. +
T Consensus 22 l~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~-~~~------~d~----~~~~~~~ 88 (255)
T PRK14103 22 LARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVD-ART------GDV----RDWKPKP 88 (255)
T ss_pred HHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCc-EEE------cCh----hhCCCCC
Confidence 4555667889999999875 77778888765 55 899999999888888776654 221 122 11222 3
Q ss_pred CCCEEEEecC-----C-hhhHHHHHHhhhcCCceEEEe
Q 025101 142 GADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 142 ~~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 173 (258)
.||+|+-... . ...+..+.+.|+|+ |.++..
T Consensus 89 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 89 DTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred CceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 7999986432 2 33577889999999 998765
No 327
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.0089 Score=49.30 Aligned_cols=79 Identities=18% Similarity=0.200 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-Hhc-----CCc-eE--EcCCCCCCccHHHHHHHhcC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF-----GVT-EF--VNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~-----g~~-~v--i~~~~~~~~~~~~~i~~~~~ 140 (258)
.|++++|+|+ |++|..+++.+...|+ +|++++++.++.+.+ +++ +.. .+ .|..+ .+++.+.+.++..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~ 91 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS--LASVRAAADALRA 91 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC--HHHHHHHHHHHHh
Confidence 5789999987 8999999988888899 899999887765432 211 111 12 23333 1223223333322
Q ss_pred --CCCCEEEEecCC
Q 025101 141 --GGADYCFECVGL 152 (258)
Q Consensus 141 --~~~d~v~d~~g~ 152 (258)
+++|++|.+.|.
T Consensus 92 ~~~~iD~li~nAg~ 105 (306)
T PRK06197 92 AYPRIDLLINNAGV 105 (306)
T ss_pred hCCCCCEEEECCcc
Confidence 269999998873
No 328
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.79 E-value=0.0071 Score=48.48 Aligned_cols=78 Identities=26% Similarity=0.292 Sum_probs=49.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh---cCCce---EEcCCCCCCccHHHHHHHhcC--C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVTE---FVNSKNCGDKSVSQIIIDMTD--G 141 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~~~i~~~~~--~ 141 (258)
+++++||+|+ |++|.++++.+...|+ +|+++++++...+..++ .+... ..|..+ .++....+.+... +
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence 4689999987 8999999998888899 89999887543333332 34321 233333 1223333333221 2
Q ss_pred CCCEEEEecC
Q 025101 142 GADYCFECVG 151 (258)
Q Consensus 142 ~~d~v~d~~g 151 (258)
++|+++.+.|
T Consensus 84 ~id~lv~nAg 93 (260)
T PRK12823 84 RIDVLINNVG 93 (260)
T ss_pred CCeEEEECCc
Confidence 7999999886
No 329
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.79 E-value=0.0092 Score=48.44 Aligned_cols=103 Identities=17% Similarity=0.233 Sum_probs=64.0
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCeEEEEcCCcc---hHHHH-HhcCCceE--EcCCCCCCccHHHHHHHhcC-
Q 025101 71 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFEIG-KRFGVTEF--VNSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 71 ~g~~vlI~G~---g~~G~~a~~l~~~~g~~~v~~~~~~~~---~~~~~-~~~g~~~v--i~~~~~~~~~~~~~i~~~~~- 140 (258)
.|+++||+|+ +++|.++++.+...|+ +|+.++++++ +.+.+ ++++.... .|-.+ .+++...+.+...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~ 80 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD 80 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence 4789999986 4899999998888999 8998888753 22222 34453222 34333 1223333333222
Q ss_pred -CCCCEEEEecCCh--------------h---------------hHHHHHHhhhcCCceEEEecccC
Q 025101 141 -GGADYCFECVGLA--------------S---------------LVQEAYACCRKGWGKTIVLGVDQ 177 (258)
Q Consensus 141 -~~~d~v~d~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~g~~~ 177 (258)
+.+|+++++.|.. . ..+..+..+..+ |+++.++...
T Consensus 81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~ 146 (274)
T PRK08415 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLG 146 (274)
T ss_pred cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCC
Confidence 3799999988731 0 234455566677 9998887543
No 330
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=96.79 E-value=0.022 Score=43.71 Aligned_cols=100 Identities=12% Similarity=0.165 Sum_probs=61.5
Q ss_pred hhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCceEEcCCCCCCccHHHHHHHh
Q 025101 63 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM 138 (258)
Q Consensus 63 l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~ 138 (258)
+.+.....++.+||-+|+|. |..+..+++ .|. +|++++.+++..+.+++ .+.. +.... .+... . ..
T Consensus 22 l~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~---~d~~~-~-~~ 91 (195)
T TIGR00477 22 VREAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA---YDINA-A-AL 91 (195)
T ss_pred HHHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe---ccchh-c-cc
Confidence 33444555677999999874 777777776 477 89999999887776543 2322 11111 11110 0 11
Q ss_pred cCCCCCEEEEecC-----C---hhhHHHHHHhhhcCCceEEEec
Q 025101 139 TDGGADYCFECVG-----L---ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 139 ~~~~~d~v~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~g 174 (258)
++.+|+|+.+.. . ...+..+.+.|+|+ |.++.+.
T Consensus 92 -~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 92 -NEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred -cCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 236999986422 1 23577888899999 9866554
No 331
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.011 Score=47.12 Aligned_cols=79 Identities=25% Similarity=0.263 Sum_probs=49.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc-e--EEcCCCCCCccHHHHHHHhc--C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-E--FVNSKNCGDKSVSQIIIDMT--D 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~-~--vi~~~~~~~~~~~~~i~~~~--~ 140 (258)
.++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+. +.+.. . ..|..+ .+++.....+.. .
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD--PDSAKAMADATVSAF 81 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 4688999987 9999999998888899 8999998876553332 22221 1 223332 122222222221 1
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+++|+||.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (250)
T PRK07774 82 GGIDYLVNNAAI 93 (250)
T ss_pred CCCCEEEECCCC
Confidence 269999998873
No 332
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.0091 Score=47.74 Aligned_cols=79 Identities=16% Similarity=0.214 Sum_probs=51.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc---eEEcCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~i~~~~~-- 140 (258)
+++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ .+.. ...|..+ .+++...+.+...
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALERF 80 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHHc
Confidence 5689999987 8999999998888999 89999988876544322 2322 1223322 1223333332221
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+.+|++|.+.|.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 268999998864
No 333
>PRK08264 short chain dehydrogenase; Validated
Probab=96.79 E-value=0.012 Score=46.52 Aligned_cols=75 Identities=16% Similarity=0.197 Sum_probs=49.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCc-eE--EcCCCCCCccHHHHHHHhcCCCCCEE
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTDGGADYC 146 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~-~v--i~~~~~~~~~~~~~i~~~~~~~~d~v 146 (258)
.+++++|+|+ |.+|..+++.+...|+.+|+++++++++.+. .+.. .+ .|..+ .+-.+.+.+.. +.+|+|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~---~~~~~~~~~~~-~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD---PASVAAAAEAA-SDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC---HHHHHHHHHhc-CCCCEE
Confidence 4678999986 9999999998888898679999888765543 3222 12 23332 22222222222 258999
Q ss_pred EEecCC
Q 025101 147 FECVGL 152 (258)
Q Consensus 147 ~d~~g~ 152 (258)
|.+.|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 988876
No 334
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.79 E-value=0.032 Score=43.65 Aligned_cols=103 Identities=19% Similarity=0.236 Sum_probs=61.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCc------ch-------------HHHHH----hcCC-ceEEcCCCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS------EK-------------FEIGK----RFGV-TEFVNSKNC 126 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~------~~-------------~~~~~----~~g~-~~vi~~~~~ 126 (258)
+...|+|.|.|++|..++..+...|..++..++... .| .+.++ +... ..|.-.++
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~- 107 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND- 107 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh-
Confidence 467899999999999999999999998888876432 11 11111 1111 11211111
Q ss_pred CCccHHHHHHHhcCCCCCEEEEecCChhh-HHHHHHhhhcCCceEEEecccC
Q 025101 127 GDKSVSQIIIDMTDGGADYCFECVGLASL-VQEAYACCRKGWGKTIVLGVDQ 177 (258)
Q Consensus 127 ~~~~~~~~i~~~~~~~~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~ 177 (258)
-=..+.+.++...++|+|+||..+-.. +..+..|.+.+ =.++..+...
T Consensus 108 --f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag 156 (263)
T COG1179 108 --FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAG 156 (263)
T ss_pred --hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeecccc
Confidence 111234455555589999999987442 34444455555 5666665444
No 335
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.79 E-value=0.0099 Score=49.33 Aligned_cols=95 Identities=11% Similarity=0.084 Sum_probs=60.6
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEE-cCCCCCCccHHHHHHHhcCCCCCEEEEecC
Q 025101 74 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDGGADYCFECVG 151 (258)
Q Consensus 74 ~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g 151 (258)
+|+|+|+ |-+|..+++.+...|. +|.+++|+.++...+...++..+. |..+ .+ .+.+... ++|+||.+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d---~~---~l~~al~-g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL---PE---TLPPSFK-GVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC---HH---HHHHHHC-CCCEEEECCC
Confidence 6999987 9999999998888898 899999987766555555654332 3222 22 2222222 6899999865
Q ss_pred Chh------------hHHHHHHhhhcC-CceEEEeccc
Q 025101 152 LAS------------LVQEAYACCRKG-WGKTIVLGVD 176 (258)
Q Consensus 152 ~~~------------~~~~~~~~l~~~-~G~~v~~g~~ 176 (258)
... .....++.++.. -.+++.++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 74 SRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 321 112344555544 1378877753
No 336
>PRK08589 short chain dehydrogenase; Validated
Probab=96.78 E-value=0.0085 Score=48.51 Aligned_cols=79 Identities=24% Similarity=0.325 Sum_probs=49.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh---cCCc---eEEcCCCCCCccHHHHHHHhcC--C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT---EFVNSKNCGDKSVSQIIIDMTD--G 141 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~~~i~~~~~--~ 141 (258)
+++++||+|+ +++|.++++.+...|+ +|++++++++..+.+++ .+.. ...|..+ .+++...+.+... +
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHcC
Confidence 4789999987 8999999888888899 89999988332223332 3321 1233333 1223233333221 2
Q ss_pred CCCEEEEecCC
Q 025101 142 GADYCFECVGL 152 (258)
Q Consensus 142 ~~d~v~d~~g~ 152 (258)
.+|++|.+.|.
T Consensus 82 ~id~li~~Ag~ 92 (272)
T PRK08589 82 RVDVLFNNAGV 92 (272)
T ss_pred CcCEEEECCCC
Confidence 69999998764
No 337
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=96.78 E-value=0.027 Score=43.50 Aligned_cols=98 Identities=17% Similarity=0.200 Sum_probs=64.9
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCceEEcCCCCCCccHHHHHHHhc-CCCCCE
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT-DGGADY 145 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~-~~~~d~ 145 (258)
++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++ .+...+- ... .+..+.+.... ++.+|.
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~-~~~---~d~~~~l~~~~~~~~~D~ 114 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLR-LLC---GDAVEVLLDMFPDGSLDR 114 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEE-EEe---cCHHHHHHHHcCccccce
Confidence 678999999875 7788888887643489999999998887754 2332221 111 23323343323 337999
Q ss_pred EEEecCC--------------hhhHHHHHHhhhcCCceEEEec
Q 025101 146 CFECVGL--------------ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 146 v~d~~g~--------------~~~~~~~~~~l~~~~G~~v~~g 174 (258)
|+-.... ...+..+.+.|+|+ |.++...
T Consensus 115 V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~ 156 (202)
T PRK00121 115 IYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT 156 (202)
T ss_pred EEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence 8854321 34578889999999 9998654
No 338
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.0092 Score=47.48 Aligned_cols=79 Identities=22% Similarity=0.210 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hc--CCc-eEE--cCCCCCCccHHHHHHHhcC--C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF--GVT-EFV--NSKNCGDKSVSQIIIDMTD--G 141 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~--g~~-~vi--~~~~~~~~~~~~~i~~~~~--~ 141 (258)
++++++|+|+ |.+|..+++.+...|+ +|+.+.++.++.+... ++ +.. .++ |..+ .+.+.+.+..... +
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~ 80 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS--AEAVEALVDFVAARWG 80 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence 4679999987 8999999888877898 8999998876654332 22 321 122 3222 1223222322221 3
Q ss_pred CCCEEEEecCC
Q 025101 142 GADYCFECVGL 152 (258)
Q Consensus 142 ~~d~v~d~~g~ 152 (258)
++|++|.+.|.
T Consensus 81 ~id~vi~~ag~ 91 (252)
T PRK06138 81 RLDVLVNNAGF 91 (252)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 339
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.011 Score=46.37 Aligned_cols=74 Identities=18% Similarity=0.242 Sum_probs=48.9
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCceE-EcCCCCCCccHHHHHHHhcCCCCCEEEEec
Q 025101 74 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCFECV 150 (258)
Q Consensus 74 ~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~v-i~~~~~~~~~~~~~i~~~~~~~~d~v~d~~ 150 (258)
+++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+ ++..+.+.+...+.+|+++++.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~~~~~id~lv~~a 77 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD---PASLEEARGLFPHHLDTIVNVP 77 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC---HHHHHHHHHHHhhcCcEEEECC
Confidence 5899986 8999999998888899 899999888776544 34444322 34333 3333333222222689999876
Q ss_pred C
Q 025101 151 G 151 (258)
Q Consensus 151 g 151 (258)
|
T Consensus 78 g 78 (223)
T PRK05884 78 A 78 (223)
T ss_pred C
Confidence 4
No 340
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.77 E-value=0.012 Score=49.14 Aligned_cols=35 Identities=31% Similarity=0.333 Sum_probs=31.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 105 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~ 105 (258)
...+|+|+|+|++|..+++.+...|..++..++.+
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45789999999999999999999999899999875
No 341
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.76 E-value=0.02 Score=45.68 Aligned_cols=35 Identities=26% Similarity=0.382 Sum_probs=30.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 105 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~ 105 (258)
.+.+|+|+|+|++|..++..+...|..++.+++.+
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 46799999999999999999999999888888653
No 342
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.76 E-value=0.004 Score=45.60 Aligned_cols=95 Identities=19% Similarity=0.155 Sum_probs=56.1
Q ss_pred EEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCC--C-CCccHHHHHHHhcCCCCCEEEEecC
Q 025101 75 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN--C-GDKSVSQIIIDMTDGGADYCFECVG 151 (258)
Q Consensus 75 vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~-~~~~~~~~i~~~~~~~~d~v~d~~g 151 (258)
|+|+|+|++|...+..++..|. +|..+++.+ +.+.+++.|........+ . .+...... ....+.+|+||-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999998888877898 899999888 777777766421111100 0 00000000 111227999999987
Q ss_pred Chh---hHHHHHHhhhcCCceEEEec
Q 025101 152 LAS---LVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 152 ~~~---~~~~~~~~l~~~~G~~v~~g 174 (258)
+.. .++.+...+.+. ..++.+-
T Consensus 77 a~~~~~~l~~l~~~~~~~-t~iv~~q 101 (151)
T PF02558_consen 77 AYQLEQALQSLKPYLDPN-TTIVSLQ 101 (151)
T ss_dssp GGGHHHHHHHHCTGEETT-EEEEEES
T ss_pred ccchHHHHHHHhhccCCC-cEEEEEe
Confidence 655 233344444444 5666553
No 343
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=96.76 E-value=0.028 Score=42.82 Aligned_cols=97 Identities=15% Similarity=0.238 Sum_probs=63.4
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCce--EEcCCCCCCccHHHHHHHh
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIIDM 138 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~i~~~ 138 (258)
....+.++.+||-+|+|. |..++.+++.....+|++++.+++..+.+++ ++... ++.. +....
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~------d~~~~---- 93 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG------EAPIE---- 93 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec------Cchhh----
Confidence 455677889999999874 7777777776543389999999987776653 44322 2221 11111
Q ss_pred cCCCCCEEEEecCC---hhhHHHHHHhhhcCCceEEEe
Q 025101 139 TDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 139 ~~~~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~ 173 (258)
..+.+|+|+..... ...+..+.+.|+++ |+++..
T Consensus 94 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 94 LPGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred cCcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 12379999854321 23467888999999 998764
No 344
>PRK07985 oxidoreductase; Provisional
Probab=96.75 E-value=0.03 Score=45.93 Aligned_cols=103 Identities=21% Similarity=0.165 Sum_probs=61.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCc--chHHHH----HhcCCce-E--EcCCCCCCccHHHHHHHhcC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS--EKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~--~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~i~~~~~ 140 (258)
+++++||+|+ |++|.++++.+...|+ +|+++.++. ++.+.+ ++.|... + .|..+ .+++.+.+.+...
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 124 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD--EKFARSLVHEAHK 124 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC--HHHHHHHHHHHHH
Confidence 5689999987 8999999998888899 888876543 223222 2334221 1 23332 1223333333222
Q ss_pred --CCCCEEEEecCCh--------------------------hhHHHHHHhhhcCCceEEEecccC
Q 025101 141 --GGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVDQ 177 (258)
Q Consensus 141 --~~~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~ 177 (258)
+++|+++.+.|.. ..++.++..+..+ |+++.++...
T Consensus 125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~~ 188 (294)
T PRK07985 125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSIQ 188 (294)
T ss_pred HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCch
Confidence 2699999887631 0223444445567 8998887543
No 345
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=96.75 E-value=0.021 Score=49.50 Aligned_cols=101 Identities=20% Similarity=0.295 Sum_probs=64.1
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHH----hcCCce--EEcCCCCCCccHHHHHHH
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGK----RFGVTE--FVNSKNCGDKSVSQIIID 137 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g-~~~v~~~~~~~~~~~~~~----~~g~~~--vi~~~~~~~~~~~~~i~~ 137 (258)
...++++|++||=.|+|+ |--+..++...+ ..+|++++.++++.+.++ ++|.+. ++..+. .++ ..
T Consensus 231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da---~~l----~~ 302 (431)
T PRK14903 231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADA---ERL----TE 302 (431)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECch---hhh----hh
Confidence 346788999999888764 555556666552 238999999999988765 466543 222111 111 11
Q ss_pred hcCCCCCEEE-E--ecCChh-------------------------hHHHHHHhhhcCCceEEEec
Q 025101 138 MTDGGADYCF-E--CVGLAS-------------------------LVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 138 ~~~~~~d~v~-d--~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g 174 (258)
...+.||.|+ | |+|... .+..+++.++|+ |.++...
T Consensus 303 ~~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsT 366 (431)
T PRK14903 303 YVQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYST 366 (431)
T ss_pred hhhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEE
Confidence 1223799998 4 544321 266788999999 9977554
No 346
>PRK06720 hypothetical protein; Provisional
Probab=96.75 E-value=0.015 Score=43.59 Aligned_cols=39 Identities=26% Similarity=0.223 Sum_probs=32.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHH
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 110 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~ 110 (258)
+++.++|+|+ +++|...+..+...|+ +|+++++++++.+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~ 54 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQ 54 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHH
Confidence 5789999987 7999999888888899 8999998776543
No 347
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.0096 Score=48.32 Aligned_cols=77 Identities=16% Similarity=0.170 Sum_probs=50.4
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCC--c-eE--EcCCCCCCccHHHHHHHhcC-
Q 025101 72 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV--T-EF--VNSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 72 g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~--~-~v--i~~~~~~~~~~~~~i~~~~~- 140 (258)
++.+||+|+ |.+|..++..+...|+ +|+++++++++.+.+.+ .+. . .+ .|..+ .+++.. +.+...
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~~ 78 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLKE 78 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHHh
Confidence 568999987 8999999998888899 89999988776554422 221 1 12 23333 123333 444322
Q ss_pred -CCCCEEEEecCC
Q 025101 141 -GGADYCFECVGL 152 (258)
Q Consensus 141 -~~~d~v~d~~g~ 152 (258)
+++|+++.+.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 268999998764
No 348
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.73 E-value=0.0094 Score=47.74 Aligned_cols=78 Identities=21% Similarity=0.267 Sum_probs=49.2
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-h----cCCc--eEE--cCCCCCCccHHHHHHHhcC-
Q 025101 72 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R----FGVT--EFV--NSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 72 g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~----~g~~--~vi--~~~~~~~~~~~~~i~~~~~- 140 (258)
++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+. + .+.. .++ |..+ .+++...+.+...
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 78 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS--EQSVLALSRGVDEI 78 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC--HHHHHHHHHHHHHH
Confidence 568999987 8999999998888899 8999998876654332 1 2211 122 2222 1222222333221
Q ss_pred -CCCCEEEEecCC
Q 025101 141 -GGADYCFECVGL 152 (258)
Q Consensus 141 -~~~d~v~d~~g~ 152 (258)
+++|.++.+.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (259)
T PRK12384 79 FGRVDLLVYNAGI 91 (259)
T ss_pred cCCCCEEEECCCc
Confidence 379999998873
No 349
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.73 E-value=0.015 Score=45.86 Aligned_cols=78 Identities=15% Similarity=0.098 Sum_probs=50.5
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchH-HHHHhcCCce-EEcCCCCCCccHHHHHHHhcC--CCCCEE
Q 025101 72 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF-EIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC 146 (258)
Q Consensus 72 g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~-~~~~~~g~~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~v 146 (258)
++++||+|+ |++|..+++.+...|+ +|+++++++++. +.+++.++.. ..|..+ .++....+.+... +++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST--NAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC--HHHHHHHHHHHHhhCCCccEE
Confidence 468999987 8999999998888899 899998876543 3444455421 223332 1233333333322 269999
Q ss_pred EEecCC
Q 025101 147 FECVGL 152 (258)
Q Consensus 147 ~d~~g~ 152 (258)
+.+.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 998874
No 350
>PRK09242 tropinone reductase; Provisional
Probab=96.73 E-value=0.012 Score=47.14 Aligned_cols=79 Identities=22% Similarity=0.184 Sum_probs=51.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----c--CCce-E--EcCCCCCCccHHHHHHHhcC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----F--GVTE-F--VNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~--g~~~-v--i~~~~~~~~~~~~~i~~~~~ 140 (258)
.|++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ . +... . .|..+ .+++...+.+...
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 84 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence 4789999987 8999999999988999 89999988876554322 1 2211 1 23322 1222222322221
Q ss_pred --CCCCEEEEecCC
Q 025101 141 --GGADYCFECVGL 152 (258)
Q Consensus 141 --~~~d~v~d~~g~ 152 (258)
+++|+++.+.|.
T Consensus 85 ~~g~id~li~~ag~ 98 (257)
T PRK09242 85 HWDGLHILVNNAGG 98 (257)
T ss_pred HcCCCCEEEECCCC
Confidence 379999998874
No 351
>PRK07574 formate dehydrogenase; Provisional
Probab=96.73 E-value=0.027 Score=47.91 Aligned_cols=46 Identities=30% Similarity=0.360 Sum_probs=37.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 117 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~ 117 (258)
.|.+|.|+|.|.+|+.+++.++.+|. +|++.+++....+..+++|+
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~ 236 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGL 236 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCc
Confidence 46789999999999999999999999 99999987644444444543
No 352
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.72 E-value=0.011 Score=47.02 Aligned_cols=78 Identities=22% Similarity=0.215 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc-eEE--cCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 140 (258)
++.++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+. +.+.. .++ |..+ .+.+.+.+.+...
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD--RDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4688999987 8999999998888899 8999988876654432 22322 222 2222 1223333333221
Q ss_pred CCCCEEEEecC
Q 025101 141 GGADYCFECVG 151 (258)
Q Consensus 141 ~~~d~v~d~~g 151 (258)
+++|++|.+.|
T Consensus 79 ~~~d~vi~~ag 89 (250)
T TIGR03206 79 GPVDVLVNNAG 89 (250)
T ss_pred CCCCEEEECCC
Confidence 26899999887
No 353
>PRK01581 speE spermidine synthase; Validated
Probab=96.72 E-value=0.038 Score=46.30 Aligned_cols=102 Identities=13% Similarity=0.077 Sum_probs=64.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC-c----eEEcCCCC--CCccHHHHHHHhcCCC
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-T----EFVNSKNC--GDKSVSQIIIDMTDGG 142 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~-~----~vi~~~~~--~~~~~~~~i~~~~~~~ 142 (258)
...++|||+|+| .|.++..+++..+..+|++++.+++-.+.++++.. . ..++.... -..+..+.+.+ .++.
T Consensus 149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~~ 226 (374)
T PRK01581 149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSSL 226 (374)
T ss_pred CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCCC
Confidence 445799999976 47777888887665699999999999998886310 0 00000000 00334444543 2337
Q ss_pred CCEEE-EecCC----------hhhHHHHHHhhhcCCceEEEec
Q 025101 143 ADYCF-ECVGL----------ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 143 ~d~v~-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g 174 (258)
||+|| |.... ...+..+.+.|+|+ |.++.-.
T Consensus 227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs 268 (374)
T PRK01581 227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQS 268 (374)
T ss_pred ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence 99998 53211 12367888999999 9987553
No 354
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.72 E-value=0.011 Score=47.95 Aligned_cols=78 Identities=26% Similarity=0.262 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-H---hcCCc-eE--EcCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-K---RFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~---~~g~~-~v--i~~~~~~~~~~~~~i~~~~~-- 140 (258)
++++++|+|+ |++|+++++.+...|+ +|+++++++++.+.+ + +.+.. .. .|..+ .+++...+.+...
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD--KESLEQARQQILEDF 85 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 4789999986 8999999999888999 899999887655433 2 23322 11 23322 1222222332221
Q ss_pred CCCCEEEEecC
Q 025101 141 GGADYCFECVG 151 (258)
Q Consensus 141 ~~~d~v~d~~g 151 (258)
+.+|++|.+.|
T Consensus 86 g~id~li~~ag 96 (278)
T PRK08277 86 GPCDILINGAG 96 (278)
T ss_pred CCCCEEEECCC
Confidence 37999999877
No 355
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.71 E-value=0.02 Score=42.81 Aligned_cols=93 Identities=13% Similarity=0.242 Sum_probs=62.0
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC--ceEEcCCCCCCccHHHHHHHhcCCCCCEEEEec
Q 025101 74 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 150 (258)
Q Consensus 74 ~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~ 150 (258)
+|.|+|+ |-+|...++=|+.+|- .|++++|+++|....+..-+ ..++|... +.+.+ . ++|+||++.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~~-----~a~~l---~--g~DaVIsA~ 70 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLTS-----LASDL---A--GHDAVISAF 70 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChhh-----hHhhh---c--CCceEEEec
Confidence 6789997 9999999999999998 89999999988865422110 11332221 11111 1 799999998
Q ss_pred CCh--h-------hHHHHHHhhhcC-CceEEEecccC
Q 025101 151 GLA--S-------LVQEAYACCRKG-WGKTIVLGVDQ 177 (258)
Q Consensus 151 g~~--~-------~~~~~~~~l~~~-~G~~v~~g~~~ 177 (258)
|.. . ..+.++..++.. .-|++.+|..+
T Consensus 71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 864 1 234466777763 24788887543
No 356
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.71 E-value=0.011 Score=47.95 Aligned_cols=78 Identities=19% Similarity=0.331 Sum_probs=47.9
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCeEEEEcCCcc---hHHHH-HhcCCceE--EcCCCCCCccHHHHHHHhcC-
Q 025101 71 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFEIG-KRFGVTEF--VNSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 71 ~g~~vlI~G~---g~~G~~a~~l~~~~g~~~v~~~~~~~~---~~~~~-~~~g~~~v--i~~~~~~~~~~~~~i~~~~~- 140 (258)
.|+++||+|+ +++|.++++.+...|+ +|+.+.++++ +.+.+ ++++.... .|-.+ .++..+.+.+...
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~ 85 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD--EASIDAVFETLEKK 85 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC--HHHHHHHHHHHHHh
Confidence 5789999986 5899999988888999 8988876642 22222 33453222 23222 1223333333222
Q ss_pred -CCCCEEEEecC
Q 025101 141 -GGADYCFECVG 151 (258)
Q Consensus 141 -~~~d~v~d~~g 151 (258)
+.+|+++++.|
T Consensus 86 ~g~iD~lv~nAG 97 (272)
T PRK08159 86 WGKLDFVVHAIG 97 (272)
T ss_pred cCCCcEEEECCc
Confidence 36999999876
No 357
>PRK09186 flagellin modification protein A; Provisional
Probab=96.71 E-value=0.01 Score=47.37 Aligned_cols=78 Identities=21% Similarity=0.337 Sum_probs=50.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-Hhc----CCce----EEcCCCCCCccHHHHHHHhcC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF----GVTE----FVNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~----g~~~----vi~~~~~~~~~~~~~i~~~~~ 140 (258)
+++++||+|+ |++|..++..+...|+ +|+++++++++.+.+ +++ +... ..|..+ ++++.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 79 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence 4789999987 8999999998888999 899999887775443 222 2211 123333 1223333333222
Q ss_pred --CCCCEEEEecC
Q 025101 141 --GGADYCFECVG 151 (258)
Q Consensus 141 --~~~d~v~d~~g 151 (258)
+++|++|.+.+
T Consensus 80 ~~~~id~vi~~A~ 92 (256)
T PRK09186 80 KYGKIDGAVNCAY 92 (256)
T ss_pred HcCCccEEEECCc
Confidence 26999998875
No 358
>PLN00203 glutamyl-tRNA reductase
Probab=96.70 E-value=0.0089 Score=52.77 Aligned_cols=73 Identities=18% Similarity=0.276 Sum_probs=52.4
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hcC-Cc-eEEcCCCCCCccHHHHHHHhcCCCCCEEEE
Q 025101 72 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG-VT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE 148 (258)
Q Consensus 72 g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~g-~~-~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d 148 (258)
+.+|+|+|+|.+|.++++.+...|+.+|+++.++.++.+.+. +++ .. .+... ++..+.+ .+.|+||.
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~-----~dl~~al-----~~aDVVIs 335 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPL-----DEMLACA-----AEADVVFT 335 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecH-----hhHHHHH-----hcCCEEEE
Confidence 689999999999999999999899878999999988876554 453 22 11111 1222222 16999999
Q ss_pred ecCChh
Q 025101 149 CVGLAS 154 (258)
Q Consensus 149 ~~g~~~ 154 (258)
|++.+.
T Consensus 336 AT~s~~ 341 (519)
T PLN00203 336 STSSET 341 (519)
T ss_pred ccCCCC
Confidence 987644
No 359
>PRK08317 hypothetical protein; Provisional
Probab=96.70 E-value=0.023 Score=44.74 Aligned_cols=101 Identities=28% Similarity=0.390 Sum_probs=67.8
Q ss_pred hhhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHHhc----CCc-eEEcCCCCCCccHHHHHHH
Q 025101 64 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRF----GVT-EFVNSKNCGDKSVSQIIID 137 (258)
Q Consensus 64 ~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g-~~~v~~~~~~~~~~~~~~~~----g~~-~vi~~~~~~~~~~~~~i~~ 137 (258)
.+...+.++++||.+|+|. |..+..+++..+ ..++++++.+++..+.+++. +.. .++.... .+. .
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~-----~ 82 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL-----P 82 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----C
Confidence 4566788899999999976 888888888763 23899999999888877664 111 1221111 110 1
Q ss_pred hcCCCCCEEEEec-----CC-hhhHHHHHHhhhcCCceEEEec
Q 025101 138 MTDGGADYCFECV-----GL-ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 138 ~~~~~~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~g 174 (258)
...+.+|+|+-.. .. ...+..+.+.++++ |.++...
T Consensus 83 ~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 83 FPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 1223789987532 22 33578999999999 9988765
No 360
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.70 E-value=0.014 Score=46.66 Aligned_cols=79 Identities=19% Similarity=0.337 Sum_probs=48.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcch--HHHHHhcCCc-eE--EcCCCCCCccHHHHHHHhcC--CC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GG 142 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~--~~~~~~~g~~-~v--i~~~~~~~~~~~~~i~~~~~--~~ 142 (258)
+|+++||+|+ |++|.++++.+...|+ +|+.+++++.. .+.+++.+.. .. .|-.+ .+++.+.+.+... +.
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~ 85 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRK--IDGIPALLERAVAEFGH 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhCC
Confidence 4789999987 8999999999988999 88887665422 2333444422 11 22222 1233333333221 27
Q ss_pred CCEEEEecCC
Q 025101 143 ADYCFECVGL 152 (258)
Q Consensus 143 ~d~v~d~~g~ 152 (258)
+|++|.+.|.
T Consensus 86 ~D~li~~Ag~ 95 (253)
T PRK08993 86 IDILVNNAGL 95 (253)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 361
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.70 E-value=0.013 Score=47.18 Aligned_cols=78 Identities=15% Similarity=0.214 Sum_probs=47.4
Q ss_pred CCCEEEEEccC---HHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCceE--EcCCCCCCccHHHHHHHhcC-
Q 025101 71 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEF--VNSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 71 ~g~~vlI~G~g---~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~v--i~~~~~~~~~~~~~i~~~~~- 140 (258)
+|+++||+|++ ++|.++++.+...|+ +|+.+++++...+.+++ .+.... .|-.+ .+++.+.+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~ 81 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE--DASIDAMFAELGKV 81 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC--HHHHHHHHHHHHhh
Confidence 57899999863 799998888888899 88888776422222322 232122 23332 1233333333322
Q ss_pred -CCCCEEEEecC
Q 025101 141 -GGADYCFECVG 151 (258)
Q Consensus 141 -~~~d~v~d~~g 151 (258)
+.+|++|++.|
T Consensus 82 ~g~iD~linnAg 93 (262)
T PRK07984 82 WPKFDGFVHSIG 93 (262)
T ss_pred cCCCCEEEECCc
Confidence 36999999887
No 362
>PRK08328 hypothetical protein; Provisional
Probab=96.70 E-value=0.012 Score=46.52 Aligned_cols=35 Identities=29% Similarity=0.396 Sum_probs=30.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 105 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~ 105 (258)
.+.+|+|+|+|++|..++..+...|.++++.+|..
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45789999999999999999999999888888743
No 363
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=96.69 E-value=0.045 Score=44.19 Aligned_cols=101 Identities=14% Similarity=0.172 Sum_probs=62.8
Q ss_pred hcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHH----hcCCceEEcCCCCCCccHHHHHHHhcC
Q 025101 66 TANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 66 ~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g-~~~v~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~i~~~~~ 140 (258)
...+++|++||=.|+|+ |..++.++..++ ...|++++.++++.+.++ .+|...+.-... +.. .+... .
T Consensus 66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~----D~~-~~~~~-~ 138 (264)
T TIGR00446 66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF----DGR-VFGAA-V 138 (264)
T ss_pred HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC----CHH-Hhhhh-c
Confidence 45678999999888764 555555555543 238999999999987664 466543221111 111 11111 1
Q ss_pred CCCCEEE-E--ecCCh-------------------------hhHHHHHHhhhcCCceEEEec
Q 025101 141 GGADYCF-E--CVGLA-------------------------SLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 141 ~~~d~v~-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g 174 (258)
+.||.|+ | |+|.. ..+..+++.++++ |+++...
T Consensus 139 ~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYst 199 (264)
T TIGR00446 139 PKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYST 199 (264)
T ss_pred cCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence 2699997 5 55531 2467888899999 9987543
No 364
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=96.68 E-value=0.032 Score=44.80 Aligned_cols=94 Identities=22% Similarity=0.267 Sum_probs=62.5
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc---eEEcCCCCCCccHHHHHHHhcCCC
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMTDGG 142 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~i~~~~~~~ 142 (258)
.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++ .|.. .++.. +.. .+.....+.
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~------d~~-~l~~~~~~~ 112 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC------AAQ-DIAQHLETP 112 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc------CHH-HHhhhcCCC
Confidence 4567999999874 7788888875 77 89999999988887765 3321 12211 121 122222347
Q ss_pred CCEEEEec-----CC-hhhHHHHHHhhhcCCceEEEec
Q 025101 143 ADYCFECV-----GL-ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 143 ~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~g 174 (258)
+|+|+-.. .. ...+..+.+.|+|+ |.++.+-
T Consensus 113 fD~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~~ 149 (255)
T PRK11036 113 VDLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLMF 149 (255)
T ss_pred CCEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence 99998432 22 23478999999999 9997653
No 365
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.68 E-value=0.013 Score=46.81 Aligned_cols=79 Identities=27% Similarity=0.405 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCc-eEE--cCCCCCCccHHHHHHHhcC--CCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA 143 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~-~vi--~~~~~~~~~~~~~i~~~~~--~~~ 143 (258)
.++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+.+ .+.. ..+ |-.+ .++....+.+... +.+
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR--QDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 3678999987 8999999999988899 89999998877655433 3321 122 2222 1223333332211 269
Q ss_pred CEEEEecCC
Q 025101 144 DYCFECVGL 152 (258)
Q Consensus 144 d~v~d~~g~ 152 (258)
|+++.+.|.
T Consensus 82 d~li~~ag~ 90 (257)
T PRK07067 82 DILFNNAAL 90 (257)
T ss_pred CEEEECCCc
Confidence 999988763
No 366
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.013 Score=47.10 Aligned_cols=79 Identities=24% Similarity=0.299 Sum_probs=49.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh---cCCce-E--EcCCCCCCccHHHHHHHhc--CC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVTE-F--VNSKNCGDKSVSQIIIDMT--DG 141 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~---~g~~~-v--i~~~~~~~~~~~~~i~~~~--~~ 141 (258)
++++++|+|+ |++|..+++.+...|+ +|+.++++++..+..++ .+... . .|..+ .+++...+.+.. -+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD--PASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 4689999986 8999999998888899 89999888754333332 23221 1 23322 122222222221 13
Q ss_pred CCCEEEEecCC
Q 025101 142 GADYCFECVGL 152 (258)
Q Consensus 142 ~~d~v~d~~g~ 152 (258)
.+|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (263)
T PRK08226 82 RIDILVNNAGV 92 (263)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 367
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=96.68 E-value=0.05 Score=43.48 Aligned_cols=99 Identities=14% Similarity=0.226 Sum_probs=63.7
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC-ceEEcCCCCCCccHHHHHHHhcCCCC
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGA 143 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~~i~~~~~~~~ 143 (258)
+.....++.+||-+|+|. |..+..+++ .|. +|++++.+++..+.+++... ..++..+- +++ ...++.|
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~---~~~-----~~~~~~f 104 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI---ESL-----PLATATF 104 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc---ccC-----cCCCCcE
Confidence 334445678999999875 666655554 576 89999999998888877542 22221111 111 1112269
Q ss_pred CEEEEecC------ChhhHHHHHHhhhcCCceEEEecc
Q 025101 144 DYCFECVG------LASLVQEAYACCRKGWGKTIVLGV 175 (258)
Q Consensus 144 d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~ 175 (258)
|+|+.... ....+.++.+.++|+ |.++....
T Consensus 105 D~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~ 141 (251)
T PRK10258 105 DLAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTL 141 (251)
T ss_pred EEEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence 99986432 123578889999999 99887653
No 368
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=96.67 E-value=0.026 Score=46.23 Aligned_cols=70 Identities=20% Similarity=0.175 Sum_probs=49.7
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCCh
Q 025101 74 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 153 (258)
Q Consensus 74 ~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~ 153 (258)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+... .+..+.+. ..|+||.|+...
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~aDivi~~vp~~ 66 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA--------ETARQVTE-----QADVIFTMVPDS 66 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc--------CCHHHHHh-----cCCEEEEecCCH
Confidence 37789999999988888888898 89999999999888877775311 11222221 478888887765
Q ss_pred hhHH
Q 025101 154 SLVQ 157 (258)
Q Consensus 154 ~~~~ 157 (258)
..+.
T Consensus 67 ~~~~ 70 (291)
T TIGR01505 67 PQVE 70 (291)
T ss_pred HHHH
Confidence 4333
No 369
>PRK06484 short chain dehydrogenase; Validated
Probab=96.67 E-value=0.0096 Score=52.96 Aligned_cols=79 Identities=16% Similarity=0.272 Sum_probs=53.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCce---EEcCCCCCCccHHHHHHHhcC--CCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE---FVNSKNCGDKSVSQIIIDMTD--GGA 143 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~---vi~~~~~~~~~~~~~i~~~~~--~~~ 143 (258)
+|+++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+ ++++... ..|..+ .+++.+.+.+... +++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 5789999987 8999999999998999 999999988876544 4455332 234333 1233333333221 369
Q ss_pred CEEEEecCC
Q 025101 144 DYCFECVGL 152 (258)
Q Consensus 144 d~v~d~~g~ 152 (258)
|++|++.|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999998764
No 370
>PLN02244 tocopherol O-methyltransferase
Probab=96.67 E-value=0.011 Score=49.50 Aligned_cols=96 Identities=21% Similarity=0.243 Sum_probs=63.6
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc---eEEcCCCCCCccHHHHHHHhcCCC
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMTDGG 142 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~i~~~~~~~ 142 (258)
+++++||-+|+|. |..+..+++..|+ +|++++.++...+.+++ .|.. .++..+- .++ ....+.
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~---~~~-----~~~~~~ 186 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA---LNQ-----PFEDGQ 186 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc---ccC-----CCCCCC
Confidence 6788999999874 7777888887788 99999999987776654 2321 1111111 010 112237
Q ss_pred CCEEEEecC-----C-hhhHHHHHHhhhcCCceEEEeccc
Q 025101 143 ADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVLGVD 176 (258)
Q Consensus 143 ~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~~ 176 (258)
||+|+-... . ...+.++.+.|+|+ |++++....
T Consensus 187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~~ 225 (340)
T PLN02244 187 FDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTWC 225 (340)
T ss_pred ccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEec
Confidence 999985322 1 23578899999999 999876543
No 371
>PLN03139 formate dehydrogenase; Provisional
Probab=96.67 E-value=0.025 Score=48.03 Aligned_cols=46 Identities=24% Similarity=0.294 Sum_probs=37.6
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 117 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~ 117 (258)
.|++|.|+|.|.+|...++.++.+|. +|++.+++....+..++.|+
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~ 243 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA 243 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence 57899999999999999999999999 89999887644444445554
No 372
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.014 Score=46.80 Aligned_cols=78 Identities=18% Similarity=0.192 Sum_probs=49.9
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCC--c-eE--EcCCCCCCccHHHHHHHhcC--CC
Q 025101 72 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV--T-EF--VNSKNCGDKSVSQIIIDMTD--GG 142 (258)
Q Consensus 72 g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~--~-~v--i~~~~~~~~~~~~~i~~~~~--~~ 142 (258)
+.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ +.. . .. .|..+ .+++.+.+.+... +.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD--ADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC--HHHHHHHHHHHHHhCCC
Confidence 468999986 8999999888888899 89999998877654432 321 1 11 23332 1233333333222 25
Q ss_pred CCEEEEecCC
Q 025101 143 ADYCFECVGL 152 (258)
Q Consensus 143 ~d~v~d~~g~ 152 (258)
+|+++.+.|.
T Consensus 79 id~lv~~ag~ 88 (257)
T PRK07024 79 PDVVIANAGI 88 (257)
T ss_pred CCEEEECCCc
Confidence 8999998763
No 373
>PLN02253 xanthoxin dehydrogenase
Probab=96.66 E-value=0.011 Score=48.04 Aligned_cols=79 Identities=20% Similarity=0.225 Sum_probs=49.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCC--c-e--EEcCCCCCCccHHHHHHHhcC--C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV--T-E--FVNSKNCGDKSVSQIIIDMTD--G 141 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~--~-~--vi~~~~~~~~~~~~~i~~~~~--~ 141 (258)
.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++. . . ..|..+ .+++.+.+..... +
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence 4789999986 8999999888888899 899998876654433 33321 1 1 223333 1223232332221 3
Q ss_pred CCCEEEEecCC
Q 025101 142 GADYCFECVGL 152 (258)
Q Consensus 142 ~~d~v~d~~g~ 152 (258)
++|++|.+.|.
T Consensus 94 ~id~li~~Ag~ 104 (280)
T PLN02253 94 TLDIMVNNAGL 104 (280)
T ss_pred CCCEEEECCCc
Confidence 69999998763
No 374
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.65 E-value=0.012 Score=48.85 Aligned_cols=78 Identities=21% Similarity=0.198 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcC---Cc-eE--EcCCCCCCccHHHHHHHhc--C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG---VT-EF--VNSKNCGDKSVSQIIIDMT--D 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g---~~-~v--i~~~~~~~~~~~~~i~~~~--~ 140 (258)
++++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+ +++. .. .+ .|..+ .+++...+.+.. .
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG 81 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence 4788999986 8999999988888898 899999888776543 3332 11 11 23332 122222222221 2
Q ss_pred CCCCEEEEecC
Q 025101 141 GGADYCFECVG 151 (258)
Q Consensus 141 ~~~d~v~d~~g 151 (258)
+.+|++|++.|
T Consensus 82 ~~iD~li~nAg 92 (322)
T PRK07453 82 KPLDALVCNAA 92 (322)
T ss_pred CCccEEEECCc
Confidence 26999999877
No 375
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.013 Score=47.55 Aligned_cols=77 Identities=17% Similarity=0.192 Sum_probs=50.6
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCc-e--EEcCCCCCCccHHHHHHHhcC--CCCCE
Q 025101 73 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-E--FVNSKNCGDKSVSQIIIDMTD--GGADY 145 (258)
Q Consensus 73 ~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~-~--vi~~~~~~~~~~~~~i~~~~~--~~~d~ 145 (258)
+++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+++ .+.. . ..|..+ .+.+.+.+.+... +++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 57999986 9999999888888899 89999998877666544 2321 1 123333 1223333333221 36899
Q ss_pred EEEecCC
Q 025101 146 CFECVGL 152 (258)
Q Consensus 146 v~d~~g~ 152 (258)
+|.+.|.
T Consensus 80 vi~~ag~ 86 (276)
T PRK06482 80 VVSNAGY 86 (276)
T ss_pred EEECCCC
Confidence 9998874
No 376
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.65 E-value=0.016 Score=46.31 Aligned_cols=79 Identities=27% Similarity=0.434 Sum_probs=50.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCc-eE--EcCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~-~v--i~~~~~~~~~~~~~i~~~~~-- 140 (258)
.++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++.+.. .. .|..+ .+++.+.+.....
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH--KQEVEAAIEHIEKDI 84 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC--HHHHHHHHHHHHHhc
Confidence 4789999986 8999999988888899 899999887665433 222322 12 23322 1222222222211
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+.+|+++.+.|.
T Consensus 85 ~~id~vi~~ag~ 96 (254)
T PRK08085 85 GPIDVLINNAGI 96 (254)
T ss_pred CCCCEEEECCCc
Confidence 269999998874
No 377
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.052 Score=43.23 Aligned_cols=106 Identities=19% Similarity=0.164 Sum_probs=60.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEc-CCcchHHH-H---HhcCCc-eE--EcCCCC-CCccHHHHHHHh--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEI-G---KRFGVT-EF--VNSKNC-GDKSVSQIIIDM-- 138 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~-~~~~~~~~-~---~~~g~~-~v--i~~~~~-~~~~~~~~i~~~-- 138 (258)
.++++||+|+ |++|.++++.+...|+ +|+++. +++++.+. . ++.+.. .. .|..+. +...+.+.+.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 4689999986 8999999999988999 787764 44444332 2 222322 11 122220 011122233321
Q ss_pred --cC-CCCCEEEEecCChh-------------------------hHHHHHHhhhcCCceEEEecccCC
Q 025101 139 --TD-GGADYCFECVGLAS-------------------------LVQEAYACCRKGWGKTIVLGVDQP 178 (258)
Q Consensus 139 --~~-~~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~~ 178 (258)
.+ +++|+++.+.|... ..+.++..+... |+++.++....
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~~ 148 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAAT 148 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCccc
Confidence 12 26999999887310 122345556667 89998886543
No 378
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.65 E-value=0.013 Score=46.65 Aligned_cols=76 Identities=16% Similarity=0.295 Sum_probs=50.1
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCce-E--EcCCCCCCccHHHHHHHhcC--CCCCEE
Q 025101 74 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE-F--VNSKNCGDKSVSQIIIDMTD--GGADYC 146 (258)
Q Consensus 74 ~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~-v--i~~~~~~~~~~~~~i~~~~~--~~~d~v 146 (258)
+++|+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ ++... . .|..+ .+++.+.+.+... +++|.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 6899986 8999999999888899 89999998877665533 44321 1 23332 1223333333222 269999
Q ss_pred EEecCC
Q 025101 147 FECVGL 152 (258)
Q Consensus 147 ~d~~g~ 152 (258)
+.+.|.
T Consensus 79 i~~ag~ 84 (248)
T PRK10538 79 VNNAGL 84 (248)
T ss_pred EECCCc
Confidence 988764
No 379
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.015 Score=46.22 Aligned_cols=77 Identities=18% Similarity=0.310 Sum_probs=49.5
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----c--CCc-eE--EcCCCCCCccHHHHHHHhcC-
Q 025101 72 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----F--GVT-EF--VNSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 72 g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~--g~~-~v--i~~~~~~~~~~~~~i~~~~~- 140 (258)
+++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ . +.. .+ .|..+ .+++.+.+.+...
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 568999986 8999998888877898 89999998877654422 1 221 12 23333 1233333333222
Q ss_pred -CCCCEEEEecC
Q 025101 141 -GGADYCFECVG 151 (258)
Q Consensus 141 -~~~d~v~d~~g 151 (258)
+++|++|.+.|
T Consensus 79 ~~~id~vi~~ag 90 (248)
T PRK08251 79 LGGLDRVIVNAG 90 (248)
T ss_pred cCCCCEEEECCC
Confidence 26999999886
No 380
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.014 Score=48.28 Aligned_cols=35 Identities=17% Similarity=0.210 Sum_probs=30.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 106 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~ 106 (258)
+|+++||+|+ +++|.++++.+...|+ +|++++++.
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~ 42 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRST 42 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeccc
Confidence 5789999987 7999999999988999 899988863
No 381
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.013 Score=47.44 Aligned_cols=78 Identities=17% Similarity=0.171 Sum_probs=50.6
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCc-eEE--cCCCCCCccHHHHHHHhcC--CCCC
Q 025101 72 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGAD 144 (258)
Q Consensus 72 g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~-~vi--~~~~~~~~~~~~~i~~~~~--~~~d 144 (258)
++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+ ++.. .++ |..+ .+++...+..... +++|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~d 79 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD--RAAVFAAVETAVEHFGRLD 79 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 468999986 8999999888888898 89999998877655443 3321 222 3222 1223333333221 2789
Q ss_pred EEEEecCC
Q 025101 145 YCFECVGL 152 (258)
Q Consensus 145 ~v~d~~g~ 152 (258)
.+|.+.|.
T Consensus 80 ~vi~~ag~ 87 (275)
T PRK08263 80 IVVNNAGY 87 (275)
T ss_pred EEEECCCC
Confidence 99998874
No 382
>PRK04266 fibrillarin; Provisional
Probab=96.64 E-value=0.038 Score=43.47 Aligned_cols=102 Identities=13% Similarity=0.136 Sum_probs=61.9
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCceEEcCCCCCCccHHHHHHHhcC
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~~ 140 (258)
+...+++|++||=.|+|+ |..+..+++..+..+|++++.+++..+.+.+ ...-..+..+. .+. ...... .
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~---~~~-~~~~~l-~ 139 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA---RKP-ERYAHV-V 139 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC---CCc-chhhhc-c
Confidence 346788999999998864 5566667776653389999999977664432 21112221111 110 000111 1
Q ss_pred CCCCEEEEecCCh----hhHHHHHHhhhcCCceEEEe
Q 025101 141 GGADYCFECVGLA----SLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 141 ~~~d~v~d~~g~~----~~~~~~~~~l~~~~G~~v~~ 173 (258)
+.+|+|+--...+ ..+..+.+.|+|+ |+++..
T Consensus 140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred ccCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 2599999433332 2367888899999 998874
No 383
>PLN02823 spermine synthase
Probab=96.63 E-value=0.023 Score=47.44 Aligned_cols=100 Identities=17% Similarity=0.114 Sum_probs=62.3
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC-c-eEEcCCCC--CCccHHHHHHHhcCCCCCEE
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-T-EFVNSKNC--GDKSVSQIIIDMTDGGADYC 146 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~-~-~vi~~~~~--~~~~~~~~i~~~~~~~~d~v 146 (258)
..++|||+|+|. |..+.++++..+..+|++++.+++-.+.++++-. . ..++.... -..|-...+++ .++.+|+|
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI 180 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence 457899999864 6667788887766689999999999999887421 1 11111100 00233344433 33479999
Q ss_pred E-EecC----C-------hhhHH-HHHHhhhcCCceEEEe
Q 025101 147 F-ECVG----L-------ASLVQ-EAYACCRKGWGKTIVL 173 (258)
Q Consensus 147 ~-d~~g----~-------~~~~~-~~~~~l~~~~G~~v~~ 173 (258)
| |... + ...++ .+.+.|+++ |.++.-
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q 219 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ 219 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence 8 6432 1 12244 678889999 987643
No 384
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.019 Score=45.54 Aligned_cols=76 Identities=20% Similarity=0.170 Sum_probs=47.8
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-h---c-CCc-eEE--cCCCCCCccHHHHHHHhcCCCC
Q 025101 73 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R---F-GVT-EFV--NSKNCGDKSVSQIIIDMTDGGA 143 (258)
Q Consensus 73 ~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~---~-g~~-~vi--~~~~~~~~~~~~~i~~~~~~~~ 143 (258)
++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+. + . +.. .++ |..+ .+++.+.+.+. ...+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~-~~~~ 77 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILD--TASHAAFLDSL-PALP 77 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC--hHHHHHHHHHH-hhcC
Confidence 57899986 9999999988888899 8999999887654432 1 1 111 122 3222 12233333322 2257
Q ss_pred CEEEEecCC
Q 025101 144 DYCFECVGL 152 (258)
Q Consensus 144 d~v~d~~g~ 152 (258)
|+++.+.|.
T Consensus 78 d~vv~~ag~ 86 (243)
T PRK07102 78 DIVLIAVGT 86 (243)
T ss_pred CEEEECCcC
Confidence 999987764
No 385
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.62 E-value=0.016 Score=46.34 Aligned_cols=79 Identities=18% Similarity=0.298 Sum_probs=51.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCc-eE--EcCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~-~v--i~~~~~~~~~~~~~i~~~~~-- 140 (258)
+|++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++.+.. .. .|..+ .+++...+.+...
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAEH 86 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 5889999987 8999999988888899 899999987664432 233422 12 23333 1223333333221
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+.+|.+|.+.|.
T Consensus 87 ~~id~vi~~ag~ 98 (256)
T PRK06124 87 GRLDILVNNVGA 98 (256)
T ss_pred CCCCEEEECCCC
Confidence 268999988874
No 386
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.028 Score=43.88 Aligned_cols=72 Identities=15% Similarity=0.123 Sum_probs=46.0
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCceEE--cCCCCCCccHHHHHHHhcCC--CCCEE
Q 025101 73 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFV--NSKNCGDKSVSQIIIDMTDG--GADYC 146 (258)
Q Consensus 73 ~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi--~~~~~~~~~~~~~i~~~~~~--~~d~v 146 (258)
+++||+|+ |.+|..++..+... . +|++++++.++.+.+.+ .....++ |..+ .+ .+.+...+ ++|.+
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~---~~---~~~~~~~~~~~id~v 75 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTD---PE---AIAAAVEQLGRLDVL 75 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCC---HH---HHHHHHHhcCCCCEE
Confidence 57999986 89999888777655 6 89999998877655443 2111222 2222 22 23332222 69999
Q ss_pred EEecCC
Q 025101 147 FECVGL 152 (258)
Q Consensus 147 ~d~~g~ 152 (258)
|.+.|.
T Consensus 76 i~~ag~ 81 (227)
T PRK08219 76 VHNAGV 81 (227)
T ss_pred EECCCc
Confidence 998874
No 387
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.62 E-value=0.02 Score=44.60 Aligned_cols=35 Identities=26% Similarity=0.253 Sum_probs=30.9
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 105 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~ 105 (258)
...+|+|+|+|++|..+++.+...|..+++.+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45789999999999999999988999889888876
No 388
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=96.62 E-value=0.03 Score=40.94 Aligned_cols=97 Identities=19% Similarity=0.258 Sum_probs=62.5
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCC---CCccHHHHHHHhcCC-CCCEE
Q 025101 72 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC---GDKSVSQIIIDMTDG-GADYC 146 (258)
Q Consensus 72 g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~---~~~~~~~~i~~~~~~-~~d~v 146 (258)
..+|+|.|. |++|.++++..|..++ -|..++-++... .....+++.++. +.+...+++.+...+ ++|.|
T Consensus 3 agrVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav 76 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV 76 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence 357899987 9999999999999999 788777665432 222234443330 112333444455555 89999
Q ss_pred EEecCChh--------------------------hHHHHHHhhhcCCceEEEecc
Q 025101 147 FECVGLAS--------------------------LVQEAYACCRKGWGKTIVLGV 175 (258)
Q Consensus 147 ~d~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~ 175 (258)
|...|+-. ....+...++++ |-+-+-|-
T Consensus 77 ~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G-GLL~LtGA 130 (236)
T KOG4022|consen 77 FCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG-GLLQLTGA 130 (236)
T ss_pred EEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC-ceeeeccc
Confidence 98766511 233455678888 88776663
No 389
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.011 Score=47.13 Aligned_cols=75 Identities=19% Similarity=0.266 Sum_probs=48.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCc-e--EEcCCCCCCccHHHHHHHhcC--CCCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-E--FVNSKNCGDKSVSQIIIDMTD--GGAD 144 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~~~i~~~~~--~~~d 144 (258)
.++++||+|+ |++|..+++.+...|+ +|+++++++++ ...+.. . ..|..+ .+++.+.+..... +.+|
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 77 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD--PDQVAALVDAIVERHGRLD 77 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 4789999986 8999999998888899 89999987654 112211 1 223332 1223333322211 2689
Q ss_pred EEEEecCC
Q 025101 145 YCFECVGL 152 (258)
Q Consensus 145 ~v~d~~g~ 152 (258)
++|.+.|.
T Consensus 78 ~vi~~ag~ 85 (252)
T PRK07856 78 VLVNNAGG 85 (252)
T ss_pred EEEECCCC
Confidence 99998873
No 390
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.61 E-value=0.052 Score=38.92 Aligned_cols=97 Identities=24% Similarity=0.285 Sum_probs=56.3
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCc-------------------chHHHH----HhcC-CceEEcCCCCC
Q 025101 72 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-------------------EKFEIG----KRFG-VTEFVNSKNCG 127 (258)
Q Consensus 72 g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~-------------------~~~~~~----~~~g-~~~vi~~~~~~ 127 (258)
..+|+|.|+|++|..++..+...|..+++.+|... .|.+.+ +++. ..++.....
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~-- 79 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE-- 79 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence 46899999999999999888888998888886532 112222 2222 112222211
Q ss_pred CccH-HHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCce-EEEec
Q 025101 128 DKSV-SQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK-TIVLG 174 (258)
Q Consensus 128 ~~~~-~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~-~v~~g 174 (258)
.+ .+.+.++. .++|+||+|+.+...-..+.+.+... +. ++..+
T Consensus 80 --~~~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~-~~p~i~~~ 124 (135)
T PF00899_consen 80 --KIDEENIEELL-KDYDIVIDCVDSLAARLLLNEICREY-GIPFIDAG 124 (135)
T ss_dssp --HCSHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHT-T-EEEEEE
T ss_pred --ccccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHc-CCCEEEEE
Confidence 11 12222222 26999999999877444555556555 54 44444
No 391
>PLN03075 nicotianamine synthase; Provisional
Probab=96.60 E-value=0.019 Score=46.82 Aligned_cols=99 Identities=14% Similarity=0.130 Sum_probs=65.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHc-CCCeEEEEcCCcchHHHHHhcC-----CceEEcCCCCCCccHHHHHHHhcCCCCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFG-----VTEFVNSKNCGDKSVSQIIIDMTDGGAD 144 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~-g~~~v~~~~~~~~~~~~~~~~g-----~~~vi~~~~~~~~~~~~~i~~~~~~~~d 144 (258)
.+++|+-+|+|+.++.++.+++.+ ...+++.++.+++..+.+++.- ...-+.... .+..+.... .++||
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~~~~~~--l~~FD 197 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVMDVTES--LKEYD 197 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchhhcccc--cCCcC
Confidence 779999999999899888888654 3337999999999888877632 111112221 222221101 13799
Q ss_pred EEEEec-------CChhhHHHHHHhhhcCCceEEEeccc
Q 025101 145 YCFECV-------GLASLVQEAYACCRKGWGKTIVLGVD 176 (258)
Q Consensus 145 ~v~d~~-------g~~~~~~~~~~~l~~~~G~~v~~g~~ 176 (258)
+||-.+ .....+....+.++|+ |.++ ++..
T Consensus 198 lVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lv-lr~~ 234 (296)
T PLN03075 198 VVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLM-LRSA 234 (296)
T ss_pred EEEEecccccccccHHHHHHHHHHhcCCC-cEEE-Eecc
Confidence 999543 2234688999999998 8876 4443
No 392
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=96.59 E-value=0.038 Score=44.80 Aligned_cols=89 Identities=19% Similarity=0.193 Sum_probs=62.1
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcch-HHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCC
Q 025101 74 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 152 (258)
Q Consensus 74 ~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~-~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 152 (258)
+|..+|.|.+|.-.++-+...|+ .|.+.++++++ .+.+++.|+...- +..+... ..|+||-++++
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~--------s~~eaa~-----~aDvVitmv~~ 67 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAA--------SPAEAAA-----EADVVITMLPD 67 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccC--------CHHHHHH-----hCCEEEEecCC
Confidence 57788999999998888888999 99999999999 8888888875331 1222222 57777777777
Q ss_pred hhhHHHHH-------HhhhcCCceEEEecccC
Q 025101 153 ASLVQEAY-------ACCRKGWGKTIVLGVDQ 177 (258)
Q Consensus 153 ~~~~~~~~-------~~l~~~~G~~v~~g~~~ 177 (258)
...+...+ ..++++ ..+|.+++.+
T Consensus 68 ~~~V~~V~~g~~g~~~~~~~G-~i~IDmSTis 98 (286)
T COG2084 68 DAAVRAVLFGENGLLEGLKPG-AIVIDMSTIS 98 (286)
T ss_pred HHHHHHHHhCccchhhcCCCC-CEEEECCCCC
Confidence 65454444 223355 6666666543
No 393
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=96.59 E-value=0.025 Score=45.89 Aligned_cols=98 Identities=13% Similarity=0.161 Sum_probs=66.7
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhc-CCce-EE-cCCC-CCCccHHHHHHHhcCCCCCEEE-
Q 025101 73 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTE-FV-NSKN-CGDKSVSQIIIDMTDGGADYCF- 147 (258)
Q Consensus 73 ~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~-g~~~-vi-~~~~-~~~~~~~~~i~~~~~~~~d~v~- 147 (258)
++|||+|.|. |-.+-+++|+....++++++-+++-.+.++++ +... -. |.+- .-..+-.+.+++... ++|+||
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV 155 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence 6999998764 66777888888777999999999989998873 3111 01 1111 011344555555443 799998
Q ss_pred EecCC---------hhhHHHHHHhhhcCCceEEEe
Q 025101 148 ECVGL---------ASLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 148 d~~g~---------~~~~~~~~~~l~~~~G~~v~~ 173 (258)
|++.. ..-.+.+-+.|+++ |.++.-
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 65543 34477889999999 988766
No 394
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.024 Score=45.26 Aligned_cols=74 Identities=19% Similarity=0.206 Sum_probs=47.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCc-chHHHHHhcCCc-eEEcCCCCCCccHHHHHHHhcCCCCCEEE
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCF 147 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~-~~~~~~~~~g~~-~vi~~~~~~~~~~~~~i~~~~~~~~d~v~ 147 (258)
++++++|+|+ |++|..+++.+...|+ +|+++++++ ++.+...+.... ...|..+ .+ .+.+.. +.+|++|
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~---~~~~~~-~~iDilV 84 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDESPNEWIKWECGK---EE---SLDKQL-ASLDVLI 84 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhccCCCeEEEeeCCC---HH---HHHHhc-CCCCEEE
Confidence 4689999987 8999999998888999 899988876 222221111111 1223332 22 233332 2699999
Q ss_pred EecCC
Q 025101 148 ECVGL 152 (258)
Q Consensus 148 d~~g~ 152 (258)
++.|.
T Consensus 85 nnAG~ 89 (245)
T PRK12367 85 LNHGI 89 (245)
T ss_pred ECCcc
Confidence 98874
No 395
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.57 E-value=0.0083 Score=48.55 Aligned_cols=82 Identities=18% Similarity=0.213 Sum_probs=53.7
Q ss_pred CCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc------eEEcCCCC-CCccHHHHHHH
Q 025101 70 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT------EFVNSKNC-GDKSVSQIIID 137 (258)
Q Consensus 70 ~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~------~vi~~~~~-~~~~~~~~i~~ 137 (258)
-.|+.+||+|+ .++|.+.+..+...|+ +|+++.+++++.+..++ .+.. ...|..+. ..+++.+...+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 36789999986 7999999999999999 99999999988655432 2221 23333330 00112223333
Q ss_pred hcCCCCCEEEEecCC
Q 025101 138 MTDGGADYCFECVGL 152 (258)
Q Consensus 138 ~~~~~~d~v~d~~g~ 152 (258)
...|++|+.+++.|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 334579999998774
No 396
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.57 E-value=0.099 Score=36.20 Aligned_cols=92 Identities=20% Similarity=0.138 Sum_probs=60.1
Q ss_pred EEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCChh
Q 025101 75 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS 154 (258)
Q Consensus 75 vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~ 154 (258)
|+|.|.|.+|..+++.++..+. +|++++.++++.+.+++.|.. ++.-+- .-.+.+++..-..++.++-++++..
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~----~~~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA----TDPEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T----TSHHHHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc----hhhhHHhhcCccccCEEEEccCCHH
Confidence 5788999999999999998666 899999999999999988864 443322 2222333332227999998887755
Q ss_pred hHHH---HHHhhhcCCceEEEe
Q 025101 155 LVQE---AYACCRKGWGKTIVL 173 (258)
Q Consensus 155 ~~~~---~~~~l~~~~G~~v~~ 173 (258)
.-.. ..+.+.+. .+++..
T Consensus 75 ~n~~~~~~~r~~~~~-~~ii~~ 95 (116)
T PF02254_consen 75 ENLLIALLARELNPD-IRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHHTTT-SEEEEE
T ss_pred HHHHHHHHHHHHCCC-CeEEEE
Confidence 2222 22333444 565544
No 397
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.57 E-value=0.053 Score=38.42 Aligned_cols=87 Identities=16% Similarity=0.204 Sum_probs=53.6
Q ss_pred EEEEcc-CHHHHHHHHHHHHcC--CCeEEEEcCCcchH---HHHHhcCCceEEcCCCCCCccHHHHH-------------
Q 025101 75 VVIFGL-GSIGLAVAEGARLCG--ATRIIGVDVISEKF---EIGKRFGVTEFVNSKNCGDKSVSQII------------- 135 (258)
Q Consensus 75 vlI~G~-g~~G~~a~~l~~~~g--~~~v~~~~~~~~~~---~~~~~~g~~~vi~~~~~~~~~~~~~i------------- 135 (258)
|.|+|+ |++|..++.+.+... + +|+++.....-. +.++++.+..+.-.++ +..+.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~----~~~~~l~~~~~~~~~~~~v 75 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE----EAYEELKKALPSKGPGIEV 75 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH----HHHHHHHHHHHHTTSSSEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHHhhhcCCCCEE
Confidence 578897 999999999999886 6 787765443322 3456677766554433 222222
Q ss_pred -------HHhcCC-CCCEEEEecCChhhHHHHHHhhhcC
Q 025101 136 -------IDMTDG-GADYCFECVGLASLVQEAYACCRKG 166 (258)
Q Consensus 136 -------~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~ 166 (258)
.++... .+|+|+.++.+...+...+..++.+
T Consensus 76 ~~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g 114 (129)
T PF02670_consen 76 LSGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG 114 (129)
T ss_dssp EESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred EeChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC
Confidence 233332 6888888776666677777777764
No 398
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.57 E-value=0.026 Score=44.10 Aligned_cols=93 Identities=13% Similarity=0.075 Sum_probs=56.9
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcc-hHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEe
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 149 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~ 149 (258)
++.+|||+|+|.+|.-=++.+...|+ +|++++..-. ....+.+.|.-..+ .++ +... ++ .++++||-|
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~-~r~-----~~~~--dl--~g~~LViaA 92 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLI-KGN-----YDKE--FI--KDKHLIVIA 92 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEE-eCC-----CChH--Hh--CCCcEEEEC
Confidence 57899999999999887777777899 8888754321 22222233322222 222 1110 11 179999999
Q ss_pred cCChhhHHHHH-HhhhcCCceEEEeccc
Q 025101 150 VGLASLVQEAY-ACCRKGWGKTIVLGVD 176 (258)
Q Consensus 150 ~g~~~~~~~~~-~~l~~~~G~~v~~g~~ 176 (258)
++.+. ++..+ ...+.. +.++.....
T Consensus 93 TdD~~-vN~~I~~~a~~~-~~lvn~vd~ 118 (223)
T PRK05562 93 TDDEK-LNNKIRKHCDRL-YKLYIDCSD 118 (223)
T ss_pred CCCHH-HHHHHHHHHHHc-CCeEEEcCC
Confidence 99988 55444 444455 666555433
No 399
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.57 E-value=0.016 Score=46.21 Aligned_cols=79 Identities=20% Similarity=0.305 Sum_probs=50.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc-eE--EcCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~-~v--i~~~~~~~~~~~~~i~~~~~-- 140 (258)
+++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+. ..+.. .+ .|..+ .+++.+.+.....
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD--EEAINAGIDYAVETF 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4679999986 9999999998888899 8999999887654432 22322 12 23332 1222222222221
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+++|++|.+.|.
T Consensus 80 ~~~d~vi~~a~~ 91 (258)
T PRK12429 80 GGVDILVNNAGI 91 (258)
T ss_pred CCCCEEEECCCC
Confidence 269999988863
No 400
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.56 E-value=0.029 Score=43.17 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=30.5
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 105 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~ 105 (258)
.+.+|+|.|+|++|.-++..+...|.+++..+|..
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 46789999999999999999999999888888654
No 401
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=96.55 E-value=0.046 Score=44.48 Aligned_cols=87 Identities=18% Similarity=0.297 Sum_probs=56.7
Q ss_pred EEEEEccCHHHHHH-HHHHHHcCCCeEEEE-cCCcch--HHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEe
Q 025101 74 TVVIFGLGSIGLAV-AEGARLCGATRIIGV-DVISEK--FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 149 (258)
Q Consensus 74 ~vlI~G~g~~G~~a-~~l~~~~g~~~v~~~-~~~~~~--~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~ 149 (258)
+|.|+|+|.+|... ..+.+..+. .+.++ +.++++ .++++++|.....+ ++...+.+ .++|+||++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~-------~~e~ll~~---~dIDaV~ia 71 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE-------GVDGLLAN---PDIDIVFDA 71 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC-------CHHHHhcC---CCCCEEEEC
Confidence 68899999999855 566665566 66654 445543 45677888754431 22222221 279999999
Q ss_pred cCChhhHHHHHHhhhcCCceEEEe
Q 025101 150 VGLASLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 150 ~g~~~~~~~~~~~l~~~~G~~v~~ 173 (258)
++.....+.+...+.. |+.++.
T Consensus 72 Tp~~~H~e~a~~al~a--Gk~VId 93 (285)
T TIGR03215 72 TSAKAHARHARLLAEL--GKIVID 93 (285)
T ss_pred CCcHHHHHHHHHHHHc--CCEEEE
Confidence 9998877777777666 444434
No 402
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=96.54 E-value=0.041 Score=46.54 Aligned_cols=137 Identities=16% Similarity=0.148 Sum_probs=76.7
Q ss_pred ccchhhcchhhhhhhhhhhhhcCC-CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcc-----------------
Q 025101 46 PNRACLLSCGVSTGVGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE----------------- 107 (258)
Q Consensus 46 ~~~aa~~~~~~~ta~~~l~~~~~~-~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~----------------- 107 (258)
.++|......+.+- .++ +.... -+|.+|.|.|.|.+|+.+++.+...|+ +|++++.+..
T Consensus 182 r~~aTg~Gv~~~~~-~a~-~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g~i~~~~Gld~~~l~~~~ 258 (411)
T COG0334 182 RSEATGYGVFYAIR-EAL-KALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKGGIYDEDGLDVEALLELK 258 (411)
T ss_pred CCcccceehHHHHH-HHH-HHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCCceecCCCCCHHHHHHHh
Confidence 34455555444433 333 33333 489999999999999999999998899 9999987776
Q ss_pred -hHHHHHh-cCCceEEcCCCC--------CCccHHHHHHHhcCC--CCCEEEEecCChhhHHHHHHhhhcCCceEEEecc
Q 025101 108 -KFEIGKR-FGVTEFVNSKNC--------GDKSVSQIIIDMTDG--GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 175 (258)
Q Consensus 108 -~~~~~~~-~g~~~vi~~~~~--------~~~~~~~~i~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 175 (258)
+...+.+ .|+. .+...+. -|..+...|...+-. ...+|.+....+. -..+.+.+... |.++.-..
T Consensus 259 ~~~~~v~~~~ga~-~i~~~e~~~~~cDIl~PcA~~n~I~~~na~~l~ak~V~EgAN~P~-t~eA~~i~~er-GIl~~PD~ 335 (411)
T COG0334 259 ERRGSVAEYAGAE-YITNEELLEVDCDILIPCALENVITEDNADQLKAKIVVEGANGPT-TPEADEILLER-GILVVPDI 335 (411)
T ss_pred hhhhhHHhhcCce-EccccccccccCcEEcccccccccchhhHHHhhhcEEEeccCCCC-CHHHHHHHHHC-CCEEcChh
Confidence 4444433 3432 2222210 000011111111111 4668888777776 35666666666 76655443
Q ss_pred cCCCCceeechHH
Q 025101 176 DQPGSQLSLSSFE 188 (258)
Q Consensus 176 ~~~~~~~~~~~~~ 188 (258)
..+..-+...++.
T Consensus 336 laNAGGV~vS~~E 348 (411)
T COG0334 336 LANAGGVIVSYLE 348 (411)
T ss_pred hccCcCeeeehHH
Confidence 3333333344443
No 403
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.54 E-value=0.019 Score=45.97 Aligned_cols=78 Identities=19% Similarity=0.270 Sum_probs=48.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCc-eE--EcCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~-~v--i~~~~~~~~~~~~~i~~~~~-- 140 (258)
.|+++||+|+ |++|..+++.+...|+ +|++++++ ++.+.+ .+.+.. .+ .|..+ .+++...+.+...
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK--PESAEKVVKEALEEF 89 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 5789999987 8999999999988999 89988877 333222 233422 12 23332 1222222332221
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+.+|+++.+.|.
T Consensus 90 g~id~li~~ag~ 101 (258)
T PRK06935 90 GKIDILVNNAGT 101 (258)
T ss_pred CCCCEEEECCCC
Confidence 268999998874
No 404
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.54 E-value=0.041 Score=45.94 Aligned_cols=96 Identities=17% Similarity=0.071 Sum_probs=64.3
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEE-cCCCC-----CCccHHHHHHHhcCCCCCE
Q 025101 72 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNC-----GDKSVSQIIIDMTDGGADY 145 (258)
Q Consensus 72 g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi-~~~~~-----~~~~~~~~i~~~~~~~~d~ 145 (258)
..+|.|+|+|.+|.+.+..+...|. +|.+.++++++.+.+.+.+..... +.... ...+..+.+ ...|+
T Consensus 4 ~m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~ 77 (328)
T PRK14618 4 GMRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADF 77 (328)
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCE
Confidence 3579999999999999888888898 899999988887766654211000 00000 001222222 26899
Q ss_pred EEEecCChhhHHHHHHhhhcCCceEEEecc
Q 025101 146 CFECVGLASLVQEAYACCRKGWGKTIVLGV 175 (258)
Q Consensus 146 v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 175 (258)
||-++.+.. +...++.++++ -.++.+..
T Consensus 78 Vi~~v~~~~-~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 78 AVVAVPSKA-LRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred EEEECchHH-HHHHHHhcCcC-CEEEEEee
Confidence 999999887 77787888876 66665643
No 405
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.018 Score=46.08 Aligned_cols=78 Identities=19% Similarity=0.307 Sum_probs=49.9
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hcC---Cce-EEcCCCCCCccHHHHHHHhcC--CCC
Q 025101 72 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG---VTE-FVNSKNCGDKSVSQIIIDMTD--GGA 143 (258)
Q Consensus 72 g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~g---~~~-vi~~~~~~~~~~~~~i~~~~~--~~~ 143 (258)
++++||+|+ |.+|..++..+...|+ +|+++++++++.+.+. ++. +.. ..|..+ .+++...+.+... +++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD--AASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 468999987 8999999888888898 8999999887765433 232 111 123332 1222233333221 269
Q ss_pred CEEEEecCC
Q 025101 144 DYCFECVGL 152 (258)
Q Consensus 144 d~v~d~~g~ 152 (258)
|+++.+.|.
T Consensus 79 d~vi~~ag~ 87 (257)
T PRK07074 79 DVLVANAGA 87 (257)
T ss_pred CEEEECCCC
Confidence 999998874
No 406
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.52 E-value=0.018 Score=45.74 Aligned_cols=79 Identities=19% Similarity=0.259 Sum_probs=49.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHH----HHhcCCc-eEE--cCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~----~~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 140 (258)
.++++||+|+ |.+|..++..+...|+ +|++++++.++... ++..+.. .++ |..+ .+++.+.+.+...
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD--RAALKAAVAAGVEDF 81 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence 4678999986 8999999988888899 89999998655433 2233322 122 2222 1223332322221
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+.+|.+|.+.|.
T Consensus 82 ~~~d~vi~~ag~ 93 (251)
T PRK12826 82 GRLDILVANAGI 93 (251)
T ss_pred CCCCEEEECCCC
Confidence 268999988754
No 407
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.52 E-value=0.035 Score=45.15 Aligned_cols=77 Identities=17% Similarity=0.256 Sum_probs=56.2
Q ss_pred CCCCEEEEEccCH-HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEE
Q 025101 70 EVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 148 (258)
Q Consensus 70 ~~g~~vlI~G~g~-~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d 148 (258)
-.|++++|+|.|+ +|..++.++...|+ .|++..+.. .++.+.+ ..+|+|++
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t----------------------~~L~~~~-----~~aDIvI~ 208 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT----------------------QNLPELV-----KQADIIVG 208 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc----------------------hhHHHHh-----ccCCEEEE
Confidence 4789999999976 99999999999999 888765421 1222222 16999999
Q ss_pred ecCChhhHHHHHHhhhcCCceEEEecccC
Q 025101 149 CVGLASLVQEAYACCRKGWGKTIVLGVDQ 177 (258)
Q Consensus 149 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 177 (258)
++|.+..+. .+.++++ ..++.+|...
T Consensus 209 AtG~~~~v~--~~~lk~g-avViDvg~n~ 234 (283)
T PRK14192 209 AVGKPELIK--KDWIKQG-AVVVDAGFHP 234 (283)
T ss_pred ccCCCCcCC--HHHcCCC-CEEEEEEEee
Confidence 998766333 3568888 8888888543
No 408
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.52 E-value=0.028 Score=44.29 Aligned_cols=70 Identities=13% Similarity=0.190 Sum_probs=49.4
Q ss_pred EEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcch--HHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecC
Q 025101 75 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 151 (258)
Q Consensus 75 vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~--~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g 151 (258)
|+|+|+ |.+|...++.+...+. +|.++.|++.+ .+.++..|+..+ ..+- +-.+.+.+... ++|.||.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~----~~~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADY----DDPESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-T----T-HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-eccc----CCHHHHHHHHc-CCceEEeecC
Confidence 789997 9999999999988888 89999988743 456677888543 2222 11233333333 7999999888
No 409
>PLN02256 arogenate dehydrogenase
Probab=96.51 E-value=0.071 Score=43.98 Aligned_cols=96 Identities=13% Similarity=0.173 Sum_probs=61.4
Q ss_pred hhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCC
Q 025101 64 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGA 143 (258)
Q Consensus 64 ~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~ 143 (258)
.+...-..+.+|.|+|.|.+|...+..++..|. +|+++++++. .+.++++|+.. . .+..+.+ ....
T Consensus 28 ~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~-~-------~~~~e~~----~~~a 93 (304)
T PLN02256 28 QEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF-F-------RDPDDFC----EEHP 93 (304)
T ss_pred hHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee-e-------CCHHHHh----hCCC
Confidence 344444466789999999999999888888887 8999988864 45566677632 1 1222211 1257
Q ss_pred CEEEEecCChhhHHHHHHh-----hhcCCceEEEecc
Q 025101 144 DYCFECVGLASLVQEAYAC-----CRKGWGKTIVLGV 175 (258)
Q Consensus 144 d~v~d~~g~~~~~~~~~~~-----l~~~~G~~v~~g~ 175 (258)
|+||-|+.... ....+.. +.++ ..++.++.
T Consensus 94 DvVilavp~~~-~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 94 DVVLLCTSILS-TEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred CEEEEecCHHH-HHHHHHhhhhhccCCC-CEEEecCC
Confidence 88888887654 3333333 3455 56666654
No 410
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=96.51 E-value=0.033 Score=48.26 Aligned_cols=102 Identities=13% Similarity=0.209 Sum_probs=64.2
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc-eE--EcCCCCCCccHHHHHHH
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIIID 137 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~-~v--i~~~~~~~~~~~~~i~~ 137 (258)
....+++|++||-.|+|+ |-.+..+++..+..+|++++.++++.+.++ ++|.. .+ ++... ..... .
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~---~~~~~-~-- 304 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG---RGPSQ-W-- 304 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc---ccccc-c--
Confidence 455788999999998754 545556666555338999999999887654 46654 22 22211 11100 0
Q ss_pred hcCCCCCEEE-E--ecCCh-------------------------hhHHHHHHhhhcCCceEEEec
Q 025101 138 MTDGGADYCF-E--CVGLA-------------------------SLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 138 ~~~~~~d~v~-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g 174 (258)
...+.||.|| | |+|.. ..+..+++.++|+ |+++...
T Consensus 305 ~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvyst 368 (426)
T TIGR00563 305 AENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYAT 368 (426)
T ss_pred ccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence 0112699998 5 55532 2467788999999 9998654
No 411
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.51 E-value=0.045 Score=41.21 Aligned_cols=33 Identities=27% Similarity=0.226 Sum_probs=28.7
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025101 74 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 106 (258)
Q Consensus 74 ~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~ 106 (258)
+|+|+|+|++|...++.+...|..++..+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999988889998898888765
No 412
>PRK06141 ornithine cyclodeaminase; Validated
Probab=96.51 E-value=0.033 Score=46.17 Aligned_cols=95 Identities=12% Similarity=0.000 Sum_probs=61.1
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHH-HcCCCeEEEEcCCcchHHHH-Hhc---CCceEEcCCCCCCccHHHHHHHhcCCCC
Q 025101 69 VEVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIG-KRF---GVTEFVNSKNCGDKSVSQIIIDMTDGGA 143 (258)
Q Consensus 69 ~~~g~~vlI~G~g~~G~~a~~l~~-~~g~~~v~~~~~~~~~~~~~-~~~---g~~~vi~~~~~~~~~~~~~i~~~~~~~~ 143 (258)
.....+++|+|+|..|...++.+. ..+..+|.+..+++++.+.+ +++ |.. +... .+..+.++ +.
T Consensus 122 ~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~-----~~~~~av~-----~a 190 (314)
T PRK06141 122 RKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV-----TDLEAAVR-----QA 190 (314)
T ss_pred CCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe-----CCHHHHHh-----cC
Confidence 356789999999999998876444 46766899999998886544 333 322 2111 22333332 69
Q ss_pred CEEEEecCChhhHHHHHHhhhcCCceEEEeccc
Q 025101 144 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 176 (258)
Q Consensus 144 d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 176 (258)
|+|+.++++...+ ..-+.++++ -.+..+|..
T Consensus 191 DIVi~aT~s~~pv-l~~~~l~~g-~~i~~ig~~ 221 (314)
T PRK06141 191 DIISCATLSTEPL-VRGEWLKPG-THLDLVGNF 221 (314)
T ss_pred CEEEEeeCCCCCE-ecHHHcCCC-CEEEeeCCC
Confidence 9999988875421 112567887 766666643
No 413
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.50 E-value=0.025 Score=47.71 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=31.5
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 106 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~ 106 (258)
.+.+|+|+|+|++|..+++.+...|.+++..++...
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 457999999999999999999999998998887654
No 414
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.49 E-value=0.051 Score=44.65 Aligned_cols=70 Identities=16% Similarity=0.153 Sum_probs=48.8
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCCh
Q 025101 74 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 153 (258)
Q Consensus 74 ~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~ 153 (258)
+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+... .+..+.+. ..|+||.|+...
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~~~~e~~~-----~~d~vi~~vp~~ 69 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA--------STAKAVAE-----QCDVIITMLPNS 69 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHh-----cCCEEEEeCCCH
Confidence 68899999999988887777898 89999999988887777665211 11222221 477888777754
Q ss_pred hhHH
Q 025101 154 SLVQ 157 (258)
Q Consensus 154 ~~~~ 157 (258)
..+.
T Consensus 70 ~~~~ 73 (296)
T PRK11559 70 PHVK 73 (296)
T ss_pred HHHH
Confidence 4333
No 415
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.49 E-value=0.022 Score=45.02 Aligned_cols=79 Identities=22% Similarity=0.306 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCce-EE--cCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-vi--~~~~~~~~~~~~~i~~~~~-- 140 (258)
.+.+++|+|+ |.+|..++..+...|+ +|+++++++++.+.+ +..+... ++ |..+ .+++.+.++....
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD--YEEVTAAIEQLKNEL 82 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 3678999986 8999999988888899 899999987665432 2233221 12 2222 1223333333221
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+++|.+|.+.|.
T Consensus 83 ~~id~vi~~ag~ 94 (239)
T PRK07666 83 GSIDILINNAGI 94 (239)
T ss_pred CCccEEEEcCcc
Confidence 279999998764
No 416
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=96.49 E-value=0.016 Score=46.81 Aligned_cols=104 Identities=16% Similarity=0.235 Sum_probs=66.7
Q ss_pred hhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcC-C-ceEEcCCCCCCccHHHHHHHhcC
Q 025101 63 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-V-TEFVNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 63 l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g-~-~~vi~~~~~~~~~~~~~i~~~~~ 140 (258)
+....++.++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++.- . ..+ .... .++.+ ....+
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i-~~~~---~D~~~--~~~~~ 115 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKI-EFEA---NDILK--KDFPE 115 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCce-EEEE---CCccc--CCCCC
Confidence 34567888999999999873 5566677776787 8999999998888776632 1 111 1111 11110 01112
Q ss_pred CCCCEEEEe--c---C---ChhhHHHHHHhhhcCCceEEEecc
Q 025101 141 GGADYCFEC--V---G---LASLVQEAYACCRKGWGKTIVLGV 175 (258)
Q Consensus 141 ~~~d~v~d~--~---g---~~~~~~~~~~~l~~~~G~~v~~g~ 175 (258)
+.||+|+.. . + ....+..+.+.|+|+ |+++....
T Consensus 116 ~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~ 157 (263)
T PTZ00098 116 NTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY 157 (263)
T ss_pred CCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 369999852 1 1 123577889999999 99987654
No 417
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=96.48 E-value=0.041 Score=45.00 Aligned_cols=92 Identities=20% Similarity=0.205 Sum_probs=55.9
Q ss_pred CEEEEEccCHHHHH-HHHHHHHcCCCeEEEEc-CCcc--hHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEE
Q 025101 73 STVVIFGLGSIGLA-VAEGARLCGATRIIGVD-VISE--KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 148 (258)
Q Consensus 73 ~~vlI~G~g~~G~~-a~~l~~~~g~~~v~~~~-~~~~--~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d 148 (258)
-++.|+|+|.+|.. +..+.+.-+. .+.++. .+++ ..++++++|....+ .++...+.+..-.++|+||+
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~-------~~ie~LL~~~~~~dIDiVf~ 76 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA-------EGIDGLLAMPEFDDIDIVFD 76 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc-------CCHHHHHhCcCCCCCCEEEE
Confidence 47899999999987 4455554466 666554 4443 34567788864332 22333332100027999999
Q ss_pred ecCChhhHHHHHHhhhcCCceEEEe
Q 025101 149 CVGLASLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 149 ~~g~~~~~~~~~~~l~~~~G~~v~~ 173 (258)
+++.....+.+...+..+ -.++..
T Consensus 77 AT~a~~H~e~a~~a~eaG-k~VID~ 100 (302)
T PRK08300 77 ATSAGAHVRHAAKLREAG-IRAIDL 100 (302)
T ss_pred CCCHHHHHHHHHHHHHcC-CeEEEC
Confidence 999887666666666654 444443
No 418
>PRK12743 oxidoreductase; Provisional
Probab=96.47 E-value=0.024 Score=45.39 Aligned_cols=77 Identities=18% Similarity=0.078 Sum_probs=47.2
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcC-CcchHHH----HHhcCCc-eE--EcCCCCCCccHH---HHHHHhc
Q 025101 72 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEI----GKRFGVT-EF--VNSKNCGDKSVS---QIIIDMT 139 (258)
Q Consensus 72 g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~-~~~~~~~----~~~~g~~-~v--i~~~~~~~~~~~---~~i~~~~ 139 (258)
++++||+|+ |++|..+++.+...|+ +|+++.+ +.++.+. ++..|.. .+ .|..+ .+++. +.+.+..
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD--LPEGAQALDKLIQRL 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 568999987 8999999999998999 8887754 4333332 2334532 22 23332 12222 2333222
Q ss_pred CCCCCEEEEecCC
Q 025101 140 DGGADYCFECVGL 152 (258)
Q Consensus 140 ~~~~d~v~d~~g~ 152 (258)
+.+|++|.+.|.
T Consensus 79 -~~id~li~~ag~ 90 (256)
T PRK12743 79 -GRIDVLVNNAGA 90 (256)
T ss_pred -CCCCEEEECCCC
Confidence 269999988874
No 419
>PRK07577 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.015 Score=45.79 Aligned_cols=74 Identities=19% Similarity=0.238 Sum_probs=48.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCc-eEEcCCCCCCccHHHHHHHhcCC-CCCEEE
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDG-GADYCF 147 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~i~~~~~~-~~d~v~ 147 (258)
+++++||+|+ |.+|..+++.+...|. +|+++++++++ ..... ...|..+ .+++.+.+.+.... +.|++|
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~d~vi 73 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD--IEQTAATLAQINEIHPVDAIV 73 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC--HHHHHHHHHHHHHhCCCcEEE
Confidence 3578999987 8999999998888898 89999887754 12211 1233333 13333334443333 689999
Q ss_pred EecCC
Q 025101 148 ECVGL 152 (258)
Q Consensus 148 d~~g~ 152 (258)
.+.|.
T Consensus 74 ~~ag~ 78 (234)
T PRK07577 74 NNVGI 78 (234)
T ss_pred ECCCC
Confidence 98874
No 420
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.47 E-value=0.02 Score=45.75 Aligned_cols=79 Identities=18% Similarity=0.199 Sum_probs=51.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCc-eE--EcCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~-~v--i~~~~~~~~~~~~~i~~~~~-- 140 (258)
.++++||+|+ +++|..++..+...|+ +|+.++++.++.+.+ ++.+.. .+ .|..+ .+++.+.+.....
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL 86 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4789999987 8999999998888899 888888877665443 223332 12 23333 1223333333221
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+.+|+++.+.|.
T Consensus 87 ~~~d~li~~ag~ 98 (255)
T PRK06113 87 GKVDILVNNAGG 98 (255)
T ss_pred CCCCEEEECCCC
Confidence 369999998873
No 421
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.023 Score=45.97 Aligned_cols=79 Identities=25% Similarity=0.320 Sum_probs=49.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcch-------HH----HHHhcCCc-eE--EcCCCCCCccHHHHH
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-------FE----IGKRFGVT-EF--VNSKNCGDKSVSQII 135 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~-------~~----~~~~~g~~-~v--i~~~~~~~~~~~~~i 135 (258)
+++++||+|+ |++|..+++.+...|+ +|++++++.++ .+ .++..+.. .+ .|..+ .+++.+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~ 81 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD--EDQVAAAV 81 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHH
Confidence 5679999987 8999999988888899 89999887542 11 12233432 12 33333 12333333
Q ss_pred HHhcC--CCCCEEEEecCC
Q 025101 136 IDMTD--GGADYCFECVGL 152 (258)
Q Consensus 136 ~~~~~--~~~d~v~d~~g~ 152 (258)
.+... +.+|++|.+.|.
T Consensus 82 ~~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 82 AKAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHHhCCCCEEEECCCC
Confidence 32211 269999998874
No 422
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.45 E-value=0.024 Score=45.26 Aligned_cols=101 Identities=15% Similarity=0.132 Sum_probs=60.5
Q ss_pred CCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhc--CCceE-EcCCCCCCccHHHHHHHhcCCCCCE
Q 025101 70 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF--GVTEF-VNSKNCGDKSVSQIIIDMTDGGADY 145 (258)
Q Consensus 70 ~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~--g~~~v-i~~~~~~~~~~~~~i~~~~~~~~d~ 145 (258)
.++.+|||+|+ |.+|..+++.+...|+ +|+++.|++++....... ++..+ .|..+ . .+.+.+....++|+
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~--~~~l~~~~~~~~d~ 88 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE---G--SDKLVEAIGDDSDA 88 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC---C--HHHHHHHhhcCCCE
Confidence 34679999996 9999999888887898 899998887765433221 23211 23322 1 12222222126999
Q ss_pred EEEecCChh-------------hHHHHHHhhhcC-CceEEEeccc
Q 025101 146 CFECVGLAS-------------LVQEAYACCRKG-WGKTIVLGVD 176 (258)
Q Consensus 146 v~d~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~ 176 (258)
||.+.|... ....+++.+... .++++.++..
T Consensus 89 vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 89 VICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 998876421 123444444433 1578887754
No 423
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.026 Score=46.12 Aligned_cols=36 Identities=33% Similarity=0.362 Sum_probs=30.1
Q ss_pred CCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCc
Q 025101 70 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 106 (258)
Q Consensus 70 ~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~ 106 (258)
-+|+++||+|+ +++|.++++.+...|+ +|++++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence 35789999986 8999999888888899 888887654
No 424
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=96.45 E-value=0.032 Score=48.46 Aligned_cols=104 Identities=18% Similarity=0.277 Sum_probs=63.2
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHH----hcCCce--EEcCCCCCCccHHHHHHH
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGK----RFGVTE--FVNSKNCGDKSVSQIIID 137 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g-~~~v~~~~~~~~~~~~~~----~~g~~~--vi~~~~~~~~~~~~~i~~ 137 (258)
....+++|++||=.|+|+ |..+..+++..+ ..+|++++.++++.+.++ .+|.+. ++..+. .++... ..
T Consensus 246 ~~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~---~~~~~~-~~ 320 (434)
T PRK14901 246 PLLDPQPGEVILDACAAP-GGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADS---RNLLEL-KP 320 (434)
T ss_pred HHhCCCCcCEEEEeCCCC-chhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCCh---hhcccc-cc
Confidence 345678899999887654 444555555443 238999999999887664 467653 222211 111100 00
Q ss_pred hcCCCCCEEE-E--ecCC-------------------------hhhHHHHHHhhhcCCceEEEec
Q 025101 138 MTDGGADYCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 138 ~~~~~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g 174 (258)
...+.||.|+ | |+|. ...+..+++.++|+ |+++...
T Consensus 321 ~~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpg-G~lvyst 384 (434)
T PRK14901 321 QWRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPG-GTLVYAT 384 (434)
T ss_pred cccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence 1123699987 5 5542 12377889999999 9987543
No 425
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=96.44 E-value=0.02 Score=47.30 Aligned_cols=94 Identities=17% Similarity=0.098 Sum_probs=56.4
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhc-CCceEEcCCCCCCccHHHHHHHh---cCCCCCEEEE
Q 025101 73 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTEFVNSKNCGDKSVSQIIIDM---TDGGADYCFE 148 (258)
Q Consensus 73 ~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~-g~~~vi~~~~~~~~~~~~~i~~~---~~~~~d~v~d 148 (258)
.+|+|+|+|++|......+...|. .|+.+++++++.+.+++- |.. +.+..+ .... .+... ..+.+|+||-
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~---~~~~-~~~~~~~~~~~~~D~viv 76 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQ---ASLY-AIPAETADAAEPIHRLLL 76 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCc---ceee-ccCCCCcccccccCEEEE
Confidence 469999999999887777777788 899999988787777653 431 221111 0000 00000 0126899999
Q ss_pred ecCChh---hHHHHHHhhhcCCceEEEe
Q 025101 149 CVGLAS---LVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 149 ~~g~~~---~~~~~~~~l~~~~G~~v~~ 173 (258)
|+=+-. .+..+...+.++ ..++.+
T Consensus 77 ~vK~~~~~~al~~l~~~l~~~-t~vv~l 103 (305)
T PRK05708 77 ACKAYDAEPAVASLAHRLAPG-AELLLL 103 (305)
T ss_pred ECCHHhHHHHHHHHHhhCCCC-CEEEEE
Confidence 886544 233444445555 655544
No 426
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=96.44 E-value=0.11 Score=36.10 Aligned_cols=87 Identities=20% Similarity=0.281 Sum_probs=59.8
Q ss_pred EEEEEccCHHHHHHHHHHHHc--CCCeEEE-EcCCcchHHH-HHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEe
Q 025101 74 TVVIFGLGSIGLAVAEGARLC--GATRIIG-VDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 149 (258)
Q Consensus 74 ~vlI~G~g~~G~~a~~l~~~~--g~~~v~~-~~~~~~~~~~-~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~ 149 (258)
++.|+|.|.+|......++.. +. ++++ .++++++.+. .+++|.. .+ .++.+.+.+. .+|+|+-+
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~-------~~~~~ll~~~---~~D~V~I~ 69 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY-------TDLEELLADE---DVDAVIIA 69 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE-------SSHHHHHHHT---TESEEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch-------hHHHHHHHhh---cCCEEEEe
Confidence 578999999998887666654 44 5554 5666666654 4668876 43 3344444332 79999999
Q ss_pred cCChhhHHHHHHhhhcCCceEEEec
Q 025101 150 VGLASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 150 ~g~~~~~~~~~~~l~~~~G~~v~~g 174 (258)
+......+.+..++.. |+-+++.
T Consensus 70 tp~~~h~~~~~~~l~~--g~~v~~E 92 (120)
T PF01408_consen 70 TPPSSHAEIAKKALEA--GKHVLVE 92 (120)
T ss_dssp SSGGGHHHHHHHHHHT--TSEEEEE
T ss_pred cCCcchHHHHHHHHHc--CCEEEEE
Confidence 9988878888888886 4555564
No 427
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.44 E-value=0.044 Score=43.11 Aligned_cols=83 Identities=19% Similarity=0.229 Sum_probs=57.4
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH--hcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecC
Q 025101 74 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK--RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 151 (258)
Q Consensus 74 ~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~--~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g 151 (258)
.++|.|+|.+|...++.+...|. .|+++++++++.+... +++.. ++.-+. .-.+.+++.--..+|+++-++|
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~----t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH-VVIGDA----TDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE-EEEecC----CCHHHHHhcCCCcCCEEEEeeC
Confidence 67899999999999999999999 8999999999877733 35543 332222 1223344432227999999999
Q ss_pred ChhhHHHHHHhh
Q 025101 152 LASLVQEAYACC 163 (258)
Q Consensus 152 ~~~~~~~~~~~l 163 (258)
+.. .+..+-.+
T Consensus 76 ~d~-~N~i~~~l 86 (225)
T COG0569 76 NDE-VNSVLALL 86 (225)
T ss_pred CCH-HHHHHHHH
Confidence 865 44444443
No 428
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.43 E-value=0.025 Score=44.72 Aligned_cols=79 Identities=22% Similarity=0.246 Sum_probs=50.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCc-eE--EcCCCCCCccHHHHHHHhcC--CCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGA 143 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~-~v--i~~~~~~~~~~~~~i~~~~~--~~~ 143 (258)
++.++||+|+ |.+|..+++.+...|+ +|+...++.++.+.+ .+.+.. .+ .|-.+ .+.+.+.+.+... +++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD--RDEVKALGQKAEADLEGV 81 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 4679999986 9999999988888898 888888777666544 334422 12 22222 1222222222211 269
Q ss_pred CEEEEecCC
Q 025101 144 DYCFECVGL 152 (258)
Q Consensus 144 d~v~d~~g~ 152 (258)
|.+|.+.|.
T Consensus 82 d~vi~~ag~ 90 (245)
T PRK12936 82 DILVNNAGI 90 (245)
T ss_pred CEEEECCCC
Confidence 999998874
No 429
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.43 E-value=0.025 Score=45.52 Aligned_cols=79 Identities=23% Similarity=0.410 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCce---EEcCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE---FVNSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~~~~i~~~~~-- 140 (258)
.+++++|+|+ +++|..++..+...|+ +|+++++++++.+.+ ++.|... ..|-.+ .+++...+.+...
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD--EDGVQAMVSQIEKEV 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 5689999987 8999998888888899 899888887765433 2334321 223332 1222222222211
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+.+|.++.+.|.
T Consensus 86 ~~id~li~~ag~ 97 (265)
T PRK07097 86 GVIDILVNNAGI 97 (265)
T ss_pred CCCCEEEECCCC
Confidence 269999998874
No 430
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.42 E-value=0.025 Score=44.92 Aligned_cols=84 Identities=19% Similarity=0.224 Sum_probs=51.7
Q ss_pred CCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCc--eE--EcCCCCCCccHHHHHHHh
Q 025101 68 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT--EF--VNSKNCGDKSVSQIIIDM 138 (258)
Q Consensus 68 ~~~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~--~v--i~~~~~~~~~~~~~i~~~ 138 (258)
...++++++|+|+ |.+|..+++.+...|+ +|++++++.++.+.+ ++.+.. .+ .|....+..++.+.+...
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 3457899999986 8999999888888899 899999987664333 233322 12 232210112232222222
Q ss_pred cC--CCCCEEEEecCC
Q 025101 139 TD--GGADYCFECVGL 152 (258)
Q Consensus 139 ~~--~~~d~v~d~~g~ 152 (258)
.. +.+|.+|.+.|.
T Consensus 87 ~~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQFGRLDGVLHNAGL 102 (247)
T ss_pred HHHhCCCCEEEECCcc
Confidence 21 269999987753
No 431
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.42 E-value=0.012 Score=45.41 Aligned_cols=35 Identities=37% Similarity=0.441 Sum_probs=30.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 105 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~ 105 (258)
...+|+|.|+|++|...++.+...|..+++.+|.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999999988999789888877
No 432
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.42 E-value=0.1 Score=41.45 Aligned_cols=103 Identities=21% Similarity=0.191 Sum_probs=59.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCc-chH----HHHHhcCCc-eE--EcCCCCCCccHHHHHHHhcC-
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKF----EIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~-~~~----~~~~~~g~~-~v--i~~~~~~~~~~~~~i~~~~~- 140 (258)
.+.++||+|+ |.+|..+++-+...|+ +|+.+.++. ++. +.+++.+.. .. .|..+ ..++...+.+...
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST--REGCETLAKATIDR 81 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC--HHHHHHHHHHHHHH
Confidence 3679999986 8999999888888999 777665432 222 122334432 12 23332 1222222332221
Q ss_pred -CCCCEEEEecCChh-------------------------hHHHHHHhhhcCCceEEEecccC
Q 025101 141 -GGADYCFECVGLAS-------------------------LVQEAYACCRKGWGKTIVLGVDQ 177 (258)
Q Consensus 141 -~~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~ 177 (258)
+++|.+|.+.|... ..+.+...++.. |+++.++...
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 27999999887300 123444555667 8998888644
No 433
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.42 E-value=0.024 Score=45.25 Aligned_cols=79 Identities=22% Similarity=0.188 Sum_probs=48.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCc-chHHHHHhcCCce-EEcCCCCCCccHHHHHHHhcC--CCCCE
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY 145 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~-~~~~~~~~~g~~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~ 145 (258)
.+++++|+|+ |++|..+++.+...|+ +|+++.+.. +..+.+++.+... ..|..+ .+++.+.+.+... +++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 4689999986 8999999998888899 787765443 3344444434321 223333 1223333333221 26999
Q ss_pred EEEecCC
Q 025101 146 CFECVGL 152 (258)
Q Consensus 146 v~d~~g~ 152 (258)
+|.+.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998864
No 434
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.022 Score=45.95 Aligned_cols=76 Identities=22% Similarity=0.267 Sum_probs=47.7
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCce-EE--cCCCCCCccHHHHHHHhcC--CCC
Q 025101 74 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMTD--GGA 143 (258)
Q Consensus 74 ~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-vi--~~~~~~~~~~~~~i~~~~~--~~~ 143 (258)
++||+|+ |++|..+++.+...|+ +|++++++.++.+.+ +..+... ++ |..+ .+++.+.+..... +++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD--YSQLTALAQACEEKWGGI 78 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 6899987 8999999888888899 899999887765432 2233222 22 2222 1222222222211 269
Q ss_pred CEEEEecCC
Q 025101 144 DYCFECVGL 152 (258)
Q Consensus 144 d~v~d~~g~ 152 (258)
|++|.+.|.
T Consensus 79 d~lI~~ag~ 87 (270)
T PRK05650 79 DVIVNNAGV 87 (270)
T ss_pred CEEEECCCC
Confidence 999998874
No 435
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.40 E-value=0.042 Score=45.47 Aligned_cols=87 Identities=17% Similarity=0.197 Sum_probs=55.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEec
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 150 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~ 150 (258)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++.++.. +...... . .++.+.+. ..|+|+.+.
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~--~---~~l~e~l~-----~aDvvv~~l 198 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAG--R---EELSAFLS-----QTRVLINLL 198 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeecc--c---ccHHHHHh-----cCCEEEECC
Confidence 57899999999999999999999999 9999987654321 1111110 0 12222222 477777766
Q ss_pred CChhh-----HHHHHHhhhcCCceEEEec
Q 025101 151 GLASL-----VQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 151 g~~~~-----~~~~~~~l~~~~G~~v~~g 174 (258)
..... -...++.++++ ..++.+|
T Consensus 199 Plt~~T~~li~~~~l~~mk~g-a~lIN~a 226 (312)
T PRK15469 199 PNTPETVGIINQQLLEQLPDG-AYLLNLA 226 (312)
T ss_pred CCCHHHHHHhHHHHHhcCCCC-cEEEECC
Confidence 64221 12455667776 6666665
No 436
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.40 E-value=0.018 Score=52.95 Aligned_cols=79 Identities=23% Similarity=0.333 Sum_probs=51.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-h----cCCce----EEcCCCCCCccHHHHHHHhcC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R----FGVTE----FVNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~----~g~~~----vi~~~~~~~~~~~~~i~~~~~ 140 (258)
.++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+. + .+... ..|..+ .+++.+.+.+...
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd--~~~v~~a~~~i~~ 489 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD--EQAVKAAFADVAL 489 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCC--HHHHHHHHHHHHH
Confidence 4789999986 8999999998888899 9999999877655432 2 23211 123322 1223333333221
Q ss_pred --CCCCEEEEecCC
Q 025101 141 --GGADYCFECVGL 152 (258)
Q Consensus 141 --~~~d~v~d~~g~ 152 (258)
+++|++|.+.|.
T Consensus 490 ~~g~iDilV~nAG~ 503 (676)
T TIGR02632 490 AYGGVDIVVNNAGI 503 (676)
T ss_pred hcCCCcEEEECCCC
Confidence 379999998874
No 437
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.39 E-value=0.029 Score=45.66 Aligned_cols=68 Identities=19% Similarity=0.282 Sum_probs=49.4
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCCh
Q 025101 74 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 153 (258)
Q Consensus 74 ~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~ 153 (258)
+|.|+|.|.+|...+..++..|. +|+++++++++.+.+.+.|..... . .+. +.+ ...|+||-|+...
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~---~~~-~~~-----~~aDlVilavp~~ 68 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S---TDL-SLL-----KDCDLVILALPIG 68 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c---CCH-hHh-----cCCCEEEEcCCHH
Confidence 58899999999988888888898 899999999888888777742111 1 111 111 1588999888865
Q ss_pred h
Q 025101 154 S 154 (258)
Q Consensus 154 ~ 154 (258)
.
T Consensus 69 ~ 69 (279)
T PRK07417 69 L 69 (279)
T ss_pred H
Confidence 5
No 438
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.39 E-value=0.031 Score=46.16 Aligned_cols=81 Identities=21% Similarity=0.305 Sum_probs=47.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCc-chHH-H---HHhcCCceEEcCCCCCCccHHHHHHHh-c-CCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFE-I---GKRFGVTEFVNSKNCGDKSVSQIIIDM-T-DGG 142 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~-~~~~-~---~~~~g~~~vi~~~~~~~~~~~~~i~~~-~-~~~ 142 (258)
+|+++||+|+ +++|...++.+...|+ +|++.++.. ++.+ . ++..|....+..-+..+.+-.+.+.+. . -+.
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 5789999987 8999999888888899 888887643 2222 2 233343222222221112222222211 1 247
Q ss_pred CCEEEEecCC
Q 025101 143 ADYCFECVGL 152 (258)
Q Consensus 143 ~d~v~d~~g~ 152 (258)
+|++|.+.|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 439
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.36 E-value=0.034 Score=47.13 Aligned_cols=35 Identities=20% Similarity=0.314 Sum_probs=31.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 105 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~ 105 (258)
.+.+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 46789999999999999999999999888888765
No 440
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.34 E-value=0.05 Score=44.44 Aligned_cols=94 Identities=18% Similarity=0.262 Sum_probs=64.0
Q ss_pred hcchhhhhhhhhhhhhcCC-CCCCEEEEEc-cCHHHHHHHHHHHHcCCCeEEEEc-CCcchHHHHHhcCCceEEcCCCCC
Q 025101 51 LLSCGVSTGVGAAWRTANV-EVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVD-VISEKFEIGKRFGVTEFVNSKNCG 127 (258)
Q Consensus 51 ~~~~~~~ta~~~l~~~~~~-~~g~~vlI~G-~g~~G~~a~~l~~~~g~~~v~~~~-~~~~~~~~~~~~g~~~vi~~~~~~ 127 (258)
.+||+....+. +.+..++ -.|++|+|+| .+.+|.-++.++...|+ .|++.. ++.
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~--------------------- 193 (296)
T PRK14188 137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR--------------------- 193 (296)
T ss_pred CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence 34544333333 3344343 4799999999 68999999999988899 788773 332
Q ss_pred CccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEecccC
Q 025101 128 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 177 (258)
Q Consensus 128 ~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 177 (258)
++.+.++ ..|+|+-++|.+..+...+ ++++ ..++.+|...
T Consensus 194 --~l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~ 233 (296)
T PRK14188 194 --DLPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR 233 (296)
T ss_pred --CHHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence 1111111 5899999999988565544 8888 8999998643
No 441
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.019 Score=46.02 Aligned_cols=74 Identities=19% Similarity=0.257 Sum_probs=46.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCc-eEEcCCCCCCccHHH---HHHHhcCCCCCE
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQ---IIIDMTDGGADY 145 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~---~i~~~~~~~~d~ 145 (258)
+|+++||+|+ |++|..+++.+...|+ +|+++++++++.. .-... ...|..+ .+++.+ .+.+.. +++|+
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~--~~~~~~~~~~~~~~~-~~id~ 80 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTT--AEGCAAVARAVLERL-GGVDI 80 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCC--HHHHHHHHHHHHHHc-CCCCE
Confidence 5789999986 8999999998888899 8999988764321 00111 1123333 122222 222222 26999
Q ss_pred EEEecC
Q 025101 146 CFECVG 151 (258)
Q Consensus 146 v~d~~g 151 (258)
+|++.|
T Consensus 81 vi~~ag 86 (260)
T PRK06523 81 LVHVLG 86 (260)
T ss_pred EEECCc
Confidence 999887
No 442
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.34 E-value=0.03 Score=48.93 Aligned_cols=71 Identities=25% Similarity=0.353 Sum_probs=48.6
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCc-chH----HHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCE
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-EKF----EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY 145 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~-~~~----~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~ 145 (258)
.+++++|+|+|.+|+.+++.+...|+ +|+++++++ +.. +.++++|.. ++..+. .+ .+ .+++|+
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~---~~---~~----~~~~d~ 71 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIE-LVLGEY---PE---EF----LEGVDL 71 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCE-EEeCCc---ch---hH----hhcCCE
Confidence 47899999998899999999999999 899998764 222 334455654 332221 11 11 126999
Q ss_pred EEEecCCh
Q 025101 146 CFECVGLA 153 (258)
Q Consensus 146 v~d~~g~~ 153 (258)
|+.+.|..
T Consensus 72 vv~~~g~~ 79 (450)
T PRK14106 72 VVVSPGVP 79 (450)
T ss_pred EEECCCCC
Confidence 99988853
No 443
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=96.34 E-value=0.049 Score=45.45 Aligned_cols=94 Identities=19% Similarity=0.118 Sum_probs=62.6
Q ss_pred CCCCEEEEEccCHHHHHHHHHHH-HcCCCeEEEEcCCcchHHHH-Hhc----CCceEEcCCCCCCccHHHHHHHhcCCCC
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIG-KRF----GVTEFVNSKNCGDKSVSQIIIDMTDGGA 143 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~-~~g~~~v~~~~~~~~~~~~~-~~~----g~~~vi~~~~~~~~~~~~~i~~~~~~~~ 143 (258)
+...+++|+|+|..|.+.+..+. ..+.++|.+..++.++.+.+ +++ |.. +... ++..+.+. +.
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~-----~~~~~av~-----~a 195 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA-----TDPRAAMS-----GA 195 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe-----CCHHHHhc-----cC
Confidence 45678999999999988777665 57877899999998886543 333 432 2222 22333332 69
Q ss_pred CEEEEecCChhhHHHHHHhhhcCCceEEEeccc
Q 025101 144 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 176 (258)
Q Consensus 144 d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 176 (258)
|+|+.|+++... -.....++++ -.+..+|..
T Consensus 196 DiVvtaT~s~~p-~i~~~~l~~g-~~i~~vg~~ 226 (326)
T TIGR02992 196 DIIVTTTPSETP-ILHAEWLEPG-QHVTAMGSD 226 (326)
T ss_pred CEEEEecCCCCc-EecHHHcCCC-cEEEeeCCC
Confidence 999999987541 1123457887 777778754
No 444
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.31 E-value=0.025 Score=45.49 Aligned_cols=79 Identities=20% Similarity=0.340 Sum_probs=47.5
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCeEEEEcCC---cchHHHH-HhcCCceE--EcCCCCCCccHHHHHHHhcC-
Q 025101 71 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVI---SEKFEIG-KRFGVTEF--VNSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 71 ~g~~vlI~G~---g~~G~~a~~l~~~~g~~~v~~~~~~---~~~~~~~-~~~g~~~v--i~~~~~~~~~~~~~i~~~~~- 140 (258)
+++++||+|+ +++|.++++.+...|+ +|+.+.+. +++.+.+ ++++.... .|..+ .+++.+.+.....
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 81 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS--DEQIDALFASLGQH 81 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC--HHHHHHHHHHHHHH
Confidence 4789999983 5899999888888999 88887543 2333322 33443222 23332 2333333333322
Q ss_pred -CCCCEEEEecCC
Q 025101 141 -GGADYCFECVGL 152 (258)
Q Consensus 141 -~~~d~v~d~~g~ 152 (258)
+.+|+++++.|.
T Consensus 82 ~g~iD~lvnnAG~ 94 (260)
T PRK06997 82 WDGLDGLVHSIGF 94 (260)
T ss_pred hCCCcEEEEcccc
Confidence 379999998763
No 445
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.30 E-value=0.038 Score=48.70 Aligned_cols=70 Identities=27% Similarity=0.286 Sum_probs=49.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcc-----hHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCC
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-----KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGAD 144 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~-----~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d 144 (258)
..+++|+|+|+|.+|+.++..++..|+ +|++++.++. ..+.+++.|+........ . + ..++|
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~-----~----~~~~D 80 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP---T-----L----PEDTD 80 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c-----c----cCCCC
Confidence 357799999999999999999999999 8999886542 224466678754333222 1 0 11688
Q ss_pred EEEEecCC
Q 025101 145 YCFECVGL 152 (258)
Q Consensus 145 ~v~d~~g~ 152 (258)
+|+-+.|-
T Consensus 81 ~Vv~s~Gi 88 (480)
T PRK01438 81 LVVTSPGW 88 (480)
T ss_pred EEEECCCc
Confidence 88888775
No 446
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=96.29 E-value=0.024 Score=46.65 Aligned_cols=85 Identities=14% Similarity=0.145 Sum_probs=53.8
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCC-CccHHHHHHHhcCCCCCEEEEecCC
Q 025101 74 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG-DKSVSQIIIDMTDGGADYCFECVGL 152 (258)
Q Consensus 74 ~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~~~i~~~~~~~~d~v~d~~g~ 152 (258)
+|+|+|+|.+|.+.+..+...|. +|+.+++++++.+.+++.|... +..+.. .........+. ..+|+||-|+..
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~--~~~d~vila~k~ 76 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL--GPQDLVILAVKA 76 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc--CCCCEEEEeccc
Confidence 58999999999998888887888 8999999888877777666421 100000 00000011111 379999999886
Q ss_pred hhhHHHHHHhhh
Q 025101 153 ASLVQEAYACCR 164 (258)
Q Consensus 153 ~~~~~~~~~~l~ 164 (258)
.. +...+..++
T Consensus 77 ~~-~~~~~~~l~ 87 (304)
T PRK06522 77 YQ-LPAALPSLA 87 (304)
T ss_pred cc-HHHHHHHHh
Confidence 55 455454444
No 447
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=96.29 E-value=0.057 Score=43.51 Aligned_cols=102 Identities=19% Similarity=0.262 Sum_probs=66.0
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHhc-C------Cc--eEEcCCCCCCccHHHH
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRF-G------VT--EFVNSKNCGDKSVSQI 134 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~~~-g------~~--~vi~~~~~~~~~~~~~ 134 (258)
+...+.++++||-+|+|. |..+..+++..|. .+|++++.+++..+.+++. . .. .++..+. +++
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~---~~l--- 139 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDA---TDL--- 139 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccc---ccC---
Confidence 345677899999999874 6677778877652 2899999999988877542 1 11 1221111 111
Q ss_pred HHHhcCCCCCEEEEecC-----C-hhhHHHHHHhhhcCCceEEEeccc
Q 025101 135 IIDMTDGGADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVLGVD 176 (258)
Q Consensus 135 i~~~~~~~~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~~ 176 (258)
...++.||.|+-+.+ . ...+.++.+.|+|+ |+++.+...
T Consensus 140 --p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~ 184 (261)
T PLN02233 140 --PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFN 184 (261)
T ss_pred --CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECC
Confidence 111226999875332 1 23588999999999 999877644
No 448
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.29 E-value=0.038 Score=47.30 Aligned_cols=81 Identities=17% Similarity=0.261 Sum_probs=50.6
Q ss_pred CCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHH-------HHHhc-CCceE-EcCCCCCCccHHHHHHH
Q 025101 68 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE-------IGKRF-GVTEF-VNSKNCGDKSVSQIIID 137 (258)
Q Consensus 68 ~~~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~-------~~~~~-g~~~v-i~~~~~~~~~~~~~i~~ 137 (258)
+...+.+|||+|+ |.+|..+++.+...|+ +|++++++.++.+ ..+.. ++..+ .|..+ .+.+...+++
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d--~~~l~~~~~~ 132 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD--ADSLRKVLFS 132 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC--HHHHHHHHHH
Confidence 3456789999986 9999999998888899 8999998775421 11112 23222 23333 1223222322
Q ss_pred hcCCCCCEEEEecCC
Q 025101 138 MTDGGADYCFECVGL 152 (258)
Q Consensus 138 ~~~~~~d~v~d~~g~ 152 (258)
. ++++|+||+|.+.
T Consensus 133 ~-~~~~D~Vi~~aa~ 146 (390)
T PLN02657 133 E-GDPVDVVVSCLAS 146 (390)
T ss_pred h-CCCCcEEEECCcc
Confidence 1 1169999998864
No 449
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=96.28 E-value=0.1 Score=42.48 Aligned_cols=108 Identities=15% Similarity=0.099 Sum_probs=72.0
Q ss_pred CCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-c--C-C-ceEEcCCC-CCCccHHHHHHHhcCC-
Q 025101 70 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--G-V-TEFVNSKN-CGDKSVSQIIIDMTDG- 141 (258)
Q Consensus 70 ~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~--g-~-~~vi~~~~-~~~~~~~~~i~~~~~~- 141 (258)
.+++-|+|+|+ ++.|..++.-+...|+ +|++.+-.++..+.++. . + . +...|-.+ .+..+..+.+++..++
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED 105 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence 45678999998 8999998888888999 99998877776665543 2 1 1 12344444 0123344455666666
Q ss_pred CCCEEEEecCCh--------------------------hhHHHHHHhhhcCCceEEEecccCC
Q 025101 142 GADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVDQP 178 (258)
Q Consensus 142 ~~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~~ 178 (258)
+.--++++.|-. ......+..+++.+||++.+++..+
T Consensus 106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G 168 (322)
T KOG1610|consen 106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG 168 (322)
T ss_pred cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc
Confidence 777888888721 1234556667766699999987665
No 450
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.28 E-value=0.035 Score=47.63 Aligned_cols=74 Identities=19% Similarity=0.289 Sum_probs=48.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcC--Cc-eEEcCCCCCCccHHHHHHHhcCCCCCE
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG--VT-EFVNSKNCGDKSVSQIIIDMTDGGADY 145 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g--~~-~vi~~~~~~~~~~~~~i~~~~~~~~d~ 145 (258)
+|++++|+|+ |++|.++++.+...|+ +|+++++++++.+.. .+.+ .. ...|..+ + +.+.+.. +++|+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd---~---~~v~~~l-~~IDi 248 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ---E---AALAELL-EKVDI 248 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC---H---HHHHHHh-CCCCE
Confidence 4789999987 8999999988888899 899998877655322 1111 11 1123333 2 2233333 26999
Q ss_pred EEEecCC
Q 025101 146 CFECVGL 152 (258)
Q Consensus 146 v~d~~g~ 152 (258)
+|.+.|.
T Consensus 249 LInnAGi 255 (406)
T PRK07424 249 LIINHGI 255 (406)
T ss_pred EEECCCc
Confidence 9988764
No 451
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=96.27 E-value=0.047 Score=49.70 Aligned_cols=76 Identities=17% Similarity=0.297 Sum_probs=57.8
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEE-cCCCCCCccHHHHHHHhcCCCCCEEEEec
Q 025101 72 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDGGADYCFECV 150 (258)
Q Consensus 72 g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~~i~~~~~~~~d~v~d~~ 150 (258)
.++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++ |..+ . +.+++.--+.+|.++-++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDat~---~---~~L~~agi~~A~~vvv~~ 472 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYGDATR---M---DLLESAGAAKAEVLINAI 472 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEEeCCC---H---HHHHhcCCCcCCEEEEEe
Confidence 3679999999999999999999999 899999999999999998865332 2222 2 223332112799999999
Q ss_pred CChh
Q 025101 151 GLAS 154 (258)
Q Consensus 151 g~~~ 154 (258)
+++.
T Consensus 473 ~d~~ 476 (621)
T PRK03562 473 DDPQ 476 (621)
T ss_pred CCHH
Confidence 8865
No 452
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.27 E-value=0.039 Score=42.77 Aligned_cols=96 Identities=18% Similarity=0.160 Sum_probs=60.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCc-chHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEe
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 149 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~ 149 (258)
+|++|||+|+|.+|.-=+.++...|+ +|+++.... +....+.+-+-...+. +. +... .+ . ++++||-+
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~~-----~~~~--~~-~-~~~lviaA 79 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-RE-----FDAE--DL-D-DAFLVIAA 79 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-cc-----cChh--hh-c-CceEEEEe
Confidence 67899999999999998999999999 888886555 2222222222111111 11 1110 01 1 58999999
Q ss_pred cCChhhHHHHHHhhhcCCceEEEecccCC
Q 025101 150 VGLASLVQEAYACCRKGWGKTIVLGVDQP 178 (258)
Q Consensus 150 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 178 (258)
++++..-+.....+.+. +.++.....+.
T Consensus 80 t~d~~ln~~i~~~a~~~-~i~vNv~D~p~ 107 (210)
T COG1648 80 TDDEELNERIAKAARER-RILVNVVDDPE 107 (210)
T ss_pred CCCHHHHHHHHHHHHHh-CCceeccCCcc
Confidence 99988444555566666 87776664443
No 453
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.11 Score=41.43 Aligned_cols=38 Identities=21% Similarity=0.122 Sum_probs=30.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEE-cCCcchH
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKF 109 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~-~~~~~~~ 109 (258)
.+.+++|+|+ |.+|..+++.+...|+ +|++. .++.++.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~ 44 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAA 44 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHH
Confidence 3678999986 9999999998888898 77664 5666554
No 454
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.26 E-value=0.028 Score=44.73 Aligned_cols=78 Identities=23% Similarity=0.385 Sum_probs=49.3
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc-eE--EcCCCCCCccHHHHHHHhc--CC
Q 025101 72 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDMT--DG 141 (258)
Q Consensus 72 g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~-~v--i~~~~~~~~~~~~~i~~~~--~~ 141 (258)
++++||+|+ |.+|..++..+...|+ +|+++++++++.+.+.+ .+.. .. .|..+ .+++...+.+.. -+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFG 77 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcC
Confidence 357999987 9999999988888899 89999998877655433 2222 11 23333 122322222221 12
Q ss_pred CCCEEEEecCC
Q 025101 142 GADYCFECVGL 152 (258)
Q Consensus 142 ~~d~v~d~~g~ 152 (258)
++|.||.+.+.
T Consensus 78 ~~d~vi~~a~~ 88 (255)
T TIGR01963 78 GLDILVNNAGI 88 (255)
T ss_pred CCCEEEECCCC
Confidence 68999987753
No 455
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=96.25 E-value=0.024 Score=45.49 Aligned_cols=103 Identities=19% Similarity=0.275 Sum_probs=60.6
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCeEEEEcCCcc------hHHHHHhcCC-ceE--EcCCCCCCccHHHHHHHh
Q 025101 71 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE------KFEIGKRFGV-TEF--VNSKNCGDKSVSQIIIDM 138 (258)
Q Consensus 71 ~g~~vlI~G~---g~~G~~a~~l~~~~g~~~v~~~~~~~~------~~~~~~~~g~-~~v--i~~~~~~~~~~~~~i~~~ 138 (258)
+|++++|+|+ +++|.++++.+...|+ +|+++.++.+ ..+.+++.+. ... .|-.+ .+++.+.+.+.
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~ 81 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD--DAQIEETFETI 81 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC--HHHHHHHHHHH
Confidence 4789999985 4899999988888999 8887754332 1222222221 112 23333 12333333332
Q ss_pred cC--CCCCEEEEecCCh-------h----------------------hHHHHHHhhhcCCceEEEecccC
Q 025101 139 TD--GGADYCFECVGLA-------S----------------------LVQEAYACCRKGWGKTIVLGVDQ 177 (258)
Q Consensus 139 ~~--~~~d~v~d~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~g~~~ 177 (258)
.. +.+|+++++.|.. . ..+..+..++.+ |+++.++...
T Consensus 82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~~ 150 (258)
T PRK07370 82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYLG 150 (258)
T ss_pred HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEeccc
Confidence 22 3799999988731 0 123456666777 9988887543
No 456
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=96.24 E-value=0.056 Score=39.91 Aligned_cols=85 Identities=14% Similarity=0.041 Sum_probs=54.3
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC------ceEEcCCCCCCccHHHHHHHhcCCCCCEEE
Q 025101 74 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV------TEFVNSKNCGDKSVSQIIIDMTDGGADYCF 147 (258)
Q Consensus 74 ~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~------~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~ 147 (258)
+|.|+|+|+.|.+++..+...|. +|....++++..+.+++-+. ...+..+-.-..++.+.++ +.|+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~-----~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALE-----DADIII 74 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHT-----T-SEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhC-----cccEEE
Confidence 57899999999999999999997 99999999988777765321 1000000000023433332 689999
Q ss_pred EecCChhhHHHHHHhhhc
Q 025101 148 ECVGLASLVQEAYACCRK 165 (258)
Q Consensus 148 d~~g~~~~~~~~~~~l~~ 165 (258)
-++.+.. +...++.+++
T Consensus 75 iavPs~~-~~~~~~~l~~ 91 (157)
T PF01210_consen 75 IAVPSQA-HREVLEQLAP 91 (157)
T ss_dssp E-S-GGG-HHHHHHHHTT
T ss_pred ecccHHH-HHHHHHHHhh
Confidence 9998866 5666666555
No 457
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.23 E-value=0.049 Score=49.00 Aligned_cols=76 Identities=11% Similarity=0.187 Sum_probs=56.1
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCC
Q 025101 73 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 152 (258)
Q Consensus 73 ~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 152 (258)
+.++|.|.|.+|+.+++.++..|. ++++++.++++.+.+++.|...+.- +- .-.+.+++.--+.+|.++-++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~----~~~~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NA----ANEEIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CC----CCHHHHHhcCccccCEEEEEcCC
Confidence 678999999999999999999998 8999999999999999988654432 21 11222333211278988877776
Q ss_pred hh
Q 025101 153 AS 154 (258)
Q Consensus 153 ~~ 154 (258)
..
T Consensus 492 ~~ 493 (558)
T PRK10669 492 GY 493 (558)
T ss_pred hH
Confidence 44
No 458
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.23 E-value=0.069 Score=43.65 Aligned_cols=94 Identities=19% Similarity=0.249 Sum_probs=64.9
Q ss_pred hcchhhhhhhhhhhhhcCC-CCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCC
Q 025101 51 LLSCGVSTGVGAAWRTANV-EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD 128 (258)
Q Consensus 51 ~~~~~~~ta~~~l~~~~~~-~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 128 (258)
.+||.....+. +.+..++ -.|++|.|+|. +.+|.-++.++...|+ .|++..+...
T Consensus 138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~--------------------- 194 (301)
T PRK14194 138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST--------------------- 194 (301)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence 45554333333 3344444 36999999997 5999999999999999 8888754321
Q ss_pred ccHHHHHHHhcCCCCCEEEEecCChhhHHHHHHhhhcCCceEEEeccc
Q 025101 129 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 176 (258)
Q Consensus 129 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 176 (258)
+..+..+ ..|+|+-++|.+..+...+ ++++ ..++.+|..
T Consensus 195 -~l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 195 -DAKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred -CHHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 1222222 5899999999887566554 8888 899999854
No 459
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.22 E-value=0.07 Score=44.63 Aligned_cols=37 Identities=38% Similarity=0.496 Sum_probs=33.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcch
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK 108 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~ 108 (258)
.|++|.|+|.|.+|..+++.++.+|. +|++.+++.+.
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 57899999999999999999999999 89999887644
No 460
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=96.22 E-value=0.059 Score=43.67 Aligned_cols=102 Identities=14% Similarity=0.144 Sum_probs=61.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcC-C-ceEEcCCCC--CCccHHHHHHHhcCCCCCE
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-V-TEFVNSKNC--GDKSVSQIIIDMTDGGADY 145 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g-~-~~vi~~~~~--~~~~~~~~i~~~~~~~~d~ 145 (258)
..+++||++|+|. |..+..+++..+..++++++.+++-.+.++++- . ...++.... -..+..+.+++. .+.+|+
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~-~~~yDv 148 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADT-ENTFDV 148 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhC-CCCccE
Confidence 3456999999865 556667777665558999999888777776631 0 000111000 002333334332 347999
Q ss_pred EE-Eec---C------ChhhHHHHHHhhhcCCceEEEec
Q 025101 146 CF-ECV---G------LASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 146 v~-d~~---g------~~~~~~~~~~~l~~~~G~~v~~g 174 (258)
|+ |.. + ....++.+.+.|+++ |.++...
T Consensus 149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 149 IIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred EEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 98 443 1 123356888999999 9998763
No 461
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.21 E-value=0.032 Score=46.90 Aligned_cols=75 Identities=13% Similarity=0.137 Sum_probs=48.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcC----Cce-EEcCCCCCCccHHHHHHHhcCC-C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG----VTE-FVNSKNCGDKSVSQIIIDMTDG-G 142 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g----~~~-vi~~~~~~~~~~~~~i~~~~~~-~ 142 (258)
+|++|||+|+ |.+|..+++.+...|. +|+++++++...... +.++ ... ..|-.+ . +.+.+...+ +
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~---~~~~~~~~~~~ 75 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD---A---AKLRKAIAEFK 75 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC---H---HHHHHHHhhcC
Confidence 4789999986 9999999999988898 899998876543322 2222 111 112222 2 223333333 6
Q ss_pred CCEEEEecCC
Q 025101 143 ADYCFECVGL 152 (258)
Q Consensus 143 ~d~v~d~~g~ 152 (258)
+|+||.+.+.
T Consensus 76 ~d~vih~A~~ 85 (349)
T TIGR02622 76 PEIVFHLAAQ 85 (349)
T ss_pred CCEEEECCcc
Confidence 8999998873
No 462
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.20 E-value=0.017 Score=40.88 Aligned_cols=79 Identities=20% Similarity=0.288 Sum_probs=49.0
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCeEEEE-cCCcchHHHHHh-cCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEe
Q 025101 72 GSTVVIFGLGSIGLAVAEGARLCGATRIIGV-DVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 149 (258)
Q Consensus 72 g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~-~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~ 149 (258)
.-+|-|+|+|.+|..+...++..|. .|..+ .++.++.+.+.. ++...+.+..+ .. ...|++|=+
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~------------~~-~~aDlv~ia 75 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE------------IL-RDADLVFIA 75 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG------------GG-CC-SEEEE-
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc------------cc-ccCCEEEEE
Confidence 3588999999999999999999998 78776 455555555544 44433333222 11 169999999
Q ss_pred cCChhhHHHHHHhhhc
Q 025101 150 VGLASLVQEAYACCRK 165 (258)
Q Consensus 150 ~g~~~~~~~~~~~l~~ 165 (258)
+.+.. +...+..+..
T Consensus 76 vpDda-I~~va~~La~ 90 (127)
T PF10727_consen 76 VPDDA-IAEVAEQLAQ 90 (127)
T ss_dssp S-CCH-HHHHHHHHHC
T ss_pred echHH-HHHHHHHHHH
Confidence 99887 7777777664
No 463
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=96.18 E-value=0.024 Score=46.81 Aligned_cols=99 Identities=14% Similarity=0.092 Sum_probs=61.9
Q ss_pred hhhhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHH---HHhc-CC---ceEEcCCCCCCccHHHHH
Q 025101 63 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI---GKRF-GV---TEFVNSKNCGDKSVSQII 135 (258)
Q Consensus 63 l~~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~---~~~~-g~---~~vi~~~~~~~~~~~~~i 135 (258)
+.......+|++||-+|+|. |..+..+++. |+..|++++.++..... ++++ +. .++... + +
T Consensus 113 ~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~------~----i 180 (314)
T TIGR00452 113 VLPHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPL------G----I 180 (314)
T ss_pred HHHhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEEC------C----H
Confidence 33444567789999999975 7777777654 66579999988865432 2332 21 112211 1 1
Q ss_pred HHhcCC-CCCEEEEec-----CC-hhhHHHHHHhhhcCCceEEEec
Q 025101 136 IDMTDG-GADYCFECV-----GL-ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 136 ~~~~~~-~~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~g 174 (258)
.++... .||+|+-.. .+ ...+.++.+.|+++ |++++-.
T Consensus 181 e~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvlet 225 (314)
T TIGR00452 181 EQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLET 225 (314)
T ss_pred HHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEEE
Confidence 222222 799998532 22 24588999999999 9998643
No 464
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.035 Score=44.93 Aligned_cols=79 Identities=18% Similarity=0.099 Sum_probs=48.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCce-E--EcCCCCCCccHHHHHHHhc--C
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMT--D 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~i~~~~--~ 140 (258)
+.++++|+|+ |.+|..+++.+...|+ +|++++++.++.+.+ +..+... + .|..+ .+++.+.+.+.. -
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD--PDSVKSFVAQAEEAL 85 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHhc
Confidence 3468999987 8999999988888899 899888876654332 2234321 1 13322 122222222221 1
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+++|++|.+.|.
T Consensus 86 ~~id~vi~~Ag~ 97 (274)
T PRK07775 86 GEIEVLVSGAGD 97 (274)
T ss_pred CCCCEEEECCCc
Confidence 268999988864
No 465
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=96.16 E-value=0.022 Score=39.51 Aligned_cols=93 Identities=25% Similarity=0.362 Sum_probs=58.4
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc---eEEcCCCCCCccHHHHHHHhcCCCCC
Q 025101 72 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMTDGGAD 144 (258)
Q Consensus 72 g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~i~~~~~~~~d 144 (258)
|.+||-.|+|. |..++.+++.... ++++++.++...+.++. .+.+ .++. .++.+.......+.+|
T Consensus 1 g~~vlD~~~G~-G~~~~~~~~~~~~-~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~------~D~~~~~~~~~~~~~D 72 (117)
T PF13659_consen 1 GDRVLDPGCGS-GTFLLAALRRGAA-RVTGVDIDPEAVELARRNLPRNGLDDRVEVIV------GDARDLPEPLPDGKFD 72 (117)
T ss_dssp TEEEEEETSTT-CHHHHHHHHHCTC-EEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE------SHHHHHHHTCTTT-EE
T ss_pred CCEEEEcCcch-HHHHHHHHHHCCC-eEEEEEECHHHHHHHHHHHHHccCCceEEEEE------CchhhchhhccCceeE
Confidence 56788887653 5566666665434 99999999998887765 3321 2221 3454444333344899
Q ss_pred EEEEecCCh--------------hhHHHHHHhhhcCCceEEEe
Q 025101 145 YCFECVGLA--------------SLVQEAYACCRKGWGKTIVL 173 (258)
Q Consensus 145 ~v~d~~g~~--------------~~~~~~~~~l~~~~G~~v~~ 173 (258)
+|+-+.... ..+..+.+.++++ |.++.+
T Consensus 73 ~Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~ 114 (117)
T PF13659_consen 73 LIVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI 114 (117)
T ss_dssp EEEE--STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EEEECCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence 998544321 2377899999999 998765
No 466
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=96.15 E-value=0.1 Score=42.96 Aligned_cols=43 Identities=21% Similarity=0.298 Sum_probs=36.9
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC
Q 025101 74 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 117 (258)
Q Consensus 74 ~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~ 117 (258)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+
T Consensus 3 ~Ig~IGlG~mG~~mA~~l~~~G~-~V~v~d~~~~~~~~~~~~g~ 45 (296)
T PRK15461 3 AIAFIGLGQMGSPMASNLLKQGH-QLQVFDVNPQAVDALVDKGA 45 (296)
T ss_pred eEEEEeeCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHcCC
Confidence 68899999999988888888898 89999999998888776664
No 467
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.15 E-value=0.095 Score=43.14 Aligned_cols=43 Identities=30% Similarity=0.578 Sum_probs=36.7
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC
Q 025101 74 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 117 (258)
Q Consensus 74 ~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~ 117 (258)
+|.++|.|.+|...+.-+...|. +|++.++++++.+.+++.|+
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~ 44 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGKLGI 44 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCC
Confidence 57889999999988888887898 89999999988888777774
No 468
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=96.13 E-value=0.0063 Score=48.11 Aligned_cols=104 Identities=24% Similarity=0.467 Sum_probs=62.5
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHh----cCCce--EEcCCCCCCccHHHHHHH
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIID 137 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~i~~ 137 (258)
+....++|++||-.|+|. |..+..+++..+. .+|+++|-+++.++.+++ .+... .+..+. +++ .
T Consensus 41 ~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da---~~l-----p 111 (233)
T PF01209_consen 41 KLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDA---EDL-----P 111 (233)
T ss_dssp HHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BT---TB-------
T ss_pred hccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCH---HHh-----c
Confidence 445678899999998874 7888888887753 289999999998888764 33221 221111 111 1
Q ss_pred hcCCCCCEEEEecCC------hhhHHHHHHhhhcCCceEEEecccCC
Q 025101 138 MTDGGADYCFECVGL------ASLVQEAYACCRKGWGKTIVLGVDQP 178 (258)
Q Consensus 138 ~~~~~~d~v~d~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~ 178 (258)
..++.||.|.-+.|- ...+.++.+.|+|| |+++.+.....
T Consensus 112 ~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPG-G~l~ile~~~p 157 (233)
T PF01209_consen 112 FPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPG-GRLVILEFSKP 157 (233)
T ss_dssp S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEE-EEEEEEEEEB-
T ss_pred CCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCC-eEEEEeeccCC
Confidence 112269999876653 33688999999999 99988875433
No 469
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=96.13 E-value=0.023 Score=44.77 Aligned_cols=100 Identities=22% Similarity=0.398 Sum_probs=64.3
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHh----cCCce--EEcCCCCCCccHHHHHHH
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIID 137 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~i~~ 137 (258)
....++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++ .+.+. ++..+. .++ .
T Consensus 39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~-----~ 109 (231)
T TIGR02752 39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNA---MEL-----P 109 (231)
T ss_pred HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEech---hcC-----C
Confidence 455678899999999874 7777788877642 289999999888777654 22222 221111 110 1
Q ss_pred hcCCCCCEEEEecC-----C-hhhHHHHHHhhhcCCceEEEec
Q 025101 138 MTDGGADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 138 ~~~~~~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~g 174 (258)
...+.+|+|+-+.. . ...+..+.+.|+|+ |+++...
T Consensus 110 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~ 151 (231)
T TIGR02752 110 FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLE 151 (231)
T ss_pred CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEE
Confidence 11237999975322 1 23467788999999 9998764
No 470
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=96.13 E-value=0.077 Score=41.51 Aligned_cols=101 Identities=20% Similarity=0.211 Sum_probs=61.3
Q ss_pred CCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCceEE---------cCCCCCCccHHHHHHH
Q 025101 68 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFV---------NSKNCGDKSVSQIIID 137 (258)
Q Consensus 68 ~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~vi---------~~~~~~~~~~~~~i~~ 137 (258)
.+.++.+||+.|+|. |.-++.||. .|+ +|++++.++.-.+.+ ++.+..... ...+ ..-+...+.+
T Consensus 34 ~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~--v~~~~~D~~~ 108 (218)
T PRK13255 34 ALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGE--ITIYCGDFFA 108 (218)
T ss_pred CCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCc--eEEEECcccC
Confidence 445678999999984 888888876 699 899999999877754 333321100 0000 0000000111
Q ss_pred hc--C-CCCCEEEEecCC--------hhhHHHHHHhhhcCCceEEEec
Q 025101 138 MT--D-GGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 138 ~~--~-~~~d~v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g 174 (258)
+. . +.||.|+|..-- ...+..+.+.|+|+ |+.++++
T Consensus 109 l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~~ 155 (218)
T PRK13255 109 LTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLVT 155 (218)
T ss_pred CCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEEE
Confidence 11 1 268999995531 22477889999999 9866554
No 471
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=96.13 E-value=0.024 Score=50.49 Aligned_cols=92 Identities=15% Similarity=0.136 Sum_probs=57.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEe
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 149 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~ 149 (258)
++++++|+|+|++|.+++..+...|+ +|+++.++.++.+.+ ++++. ..+...+ +. +......|++++|
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~-~~~~~~~-----~~----~~~~~~~diiINt 446 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGG-QALTLAD-----LE----NFHPEEGMILANT 446 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCC-ceeeHhH-----hh----hhccccCeEEEec
Confidence 46789999999999999999999999 999999987776654 34543 2222211 11 1111257899987
Q ss_pred cCChhh-----HHHHHHhhhcCCceEEEec
Q 025101 150 VGLASL-----VQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 150 ~g~~~~-----~~~~~~~l~~~~G~~v~~g 174 (258)
++-... .......+++. +.++.+-
T Consensus 447 T~vGm~~~~~~~pl~~~~l~~~-~~v~D~v 475 (529)
T PLN02520 447 TSVGMQPNVDETPISKHALKHY-SLVFDAV 475 (529)
T ss_pred ccCCCCCCCCCCcccHhhCCCC-CEEEEec
Confidence 753220 11223445665 6666554
No 472
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=96.13 E-value=0.067 Score=44.58 Aligned_cols=96 Identities=13% Similarity=0.047 Sum_probs=62.7
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHH-HcCCCeEEEEcCCcchHHHH-H---hcCCceEEcCCCCCCccHHHHHHHhcCCCC
Q 025101 69 VEVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIG-K---RFGVTEFVNSKNCGDKSVSQIIIDMTDGGA 143 (258)
Q Consensus 69 ~~~g~~vlI~G~g~~G~~a~~l~~-~~g~~~v~~~~~~~~~~~~~-~---~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~ 143 (258)
.+...++.|+|+|..|.+-++.+. .....+|.+.++++++.+.+ + ++|..... . .+..+.+. +.
T Consensus 125 ~~~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~-~-----~~~~eav~-----~a 193 (325)
T TIGR02371 125 RKDSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRA-A-----TDPREAVE-----GC 193 (325)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEE-e-----CCHHHHhc-----cC
Confidence 345678999999999987555544 45667999999999887543 3 34532111 1 22333332 69
Q ss_pred CEEEEecCChhhHHHHHHhhhcCCceEEEecccC
Q 025101 144 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 177 (258)
Q Consensus 144 d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 177 (258)
|+|+-|+++.. --.....++|+ -++..+|...
T Consensus 194 DiVitaT~s~~-P~~~~~~l~~g-~~v~~vGs~~ 225 (325)
T TIGR02371 194 DILVTTTPSRK-PVVKADWVSEG-THINAIGADA 225 (325)
T ss_pred CEEEEecCCCC-cEecHHHcCCC-CEEEecCCCC
Confidence 99999887654 11234567888 8988898654
No 473
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.12 E-value=0.05 Score=42.99 Aligned_cols=79 Identities=25% Similarity=0.297 Sum_probs=47.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcch-HHH----HHhcCCc-eEE--cCCCCCCccHHHHHHHhcC-
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEI----GKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~-~~~----~~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~- 140 (258)
+++++||+|+ |.+|..++..+...|+ +|+++.++..+ .+. ++..+.. .++ |..+ .+++.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD--AESVERAVDEAKAE 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4578999986 9999999999988899 78777665542 221 2223322 122 3333 1223232333222
Q ss_pred -CCCCEEEEecCC
Q 025101 141 -GGADYCFECVGL 152 (258)
Q Consensus 141 -~~~d~v~d~~g~ 152 (258)
+++|.+|.+.|.
T Consensus 81 ~~~id~vi~~ag~ 93 (248)
T PRK05557 81 FGGVDILVNNAGI 93 (248)
T ss_pred cCCCCEEEECCCc
Confidence 268999988764
No 474
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed
Probab=96.12 E-value=0.1 Score=45.62 Aligned_cols=101 Identities=15% Similarity=0.234 Sum_probs=62.8
Q ss_pred CCCCCCEEEEEccCHHHHHHHHHHHHcC-CCeEEEEcCCcchHHHH----HhcCCceEEcCCCCCCccHHHHHHHhcCCC
Q 025101 68 NVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIG----KRFGVTEFVNSKNCGDKSVSQIIIDMTDGG 142 (258)
Q Consensus 68 ~~~~g~~vlI~G~g~~G~~a~~l~~~~g-~~~v~~~~~~~~~~~~~----~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~ 142 (258)
.+++|++||=.++++ |-=+.+++..++ -..|++.+.+++|.+.+ +++|...+.-... +... +.+..++.
T Consensus 110 ~~~pg~~VLD~CAAP-GgKTt~la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~-D~~~----~~~~~~~~ 183 (470)
T PRK11933 110 DDNAPQRVLDMAAAP-GSKTTQIAALMNNQGAIVANEYSASRVKVLHANISRCGVSNVALTHF-DGRV----FGAALPET 183 (470)
T ss_pred CCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeC-chhh----hhhhchhh
Confidence 678999999886544 223445555442 23799999999997665 4588765322222 0011 22222336
Q ss_pred CCEEE-E--ecCCh-------------------------hhHHHHHHhhhcCCceEEEeccc
Q 025101 143 ADYCF-E--CVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD 176 (258)
Q Consensus 143 ~d~v~-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~ 176 (258)
||.|+ | |+|.. ..+..+++.++|+ |+++ |.+.
T Consensus 184 fD~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~LkpG-G~LV-YSTC 243 (470)
T PRK11933 184 FDAILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALKPG-GTLV-YSTC 243 (470)
T ss_pred cCeEEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEE-EECC
Confidence 99997 6 66652 2466788999999 9886 4444
No 475
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.12 E-value=0.12 Score=42.50 Aligned_cols=43 Identities=19% Similarity=0.257 Sum_probs=36.8
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC
Q 025101 74 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 117 (258)
Q Consensus 74 ~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~ 117 (258)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+++.|.
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~ 44 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRT 44 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence 58899999999988888877898 89999999999888877664
No 476
>PRK07578 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.19 Score=38.40 Aligned_cols=63 Identities=19% Similarity=0.282 Sum_probs=40.1
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEEEecCC
Q 025101 74 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 152 (258)
Q Consensus 74 ~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 152 (258)
+++|+|+ |++|..++..+... . +|+.+++++.. ...|-.+ ++..+.+.+.. +++|+++.+.|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~~----------~~~D~~~---~~~~~~~~~~~-~~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-H-EVITAGRSSGD----------VQVDITD---PASIRALFEKV-GKVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCCc----------eEecCCC---hHHHHHHHHhc-CCCCEEEECCCC
Confidence 6899986 89999887777655 6 89998877531 1234333 33333332222 368899887764
No 477
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.11 E-value=0.11 Score=42.73 Aligned_cols=43 Identities=26% Similarity=0.326 Sum_probs=36.8
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC
Q 025101 74 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 117 (258)
Q Consensus 74 ~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~ 117 (258)
+|.++|.|.+|...++-+...|. +|++.++++++.+.+.+.|+
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~ 44 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEEGA 44 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCC
Confidence 58899999999988888887898 89999999988887777664
No 478
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.11 E-value=0.024 Score=42.06 Aligned_cols=43 Identities=23% Similarity=0.319 Sum_probs=37.0
Q ss_pred CCCEEEEEccC-HHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh
Q 025101 71 VGSTVVIFGLG-SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 114 (258)
Q Consensus 71 ~g~~vlI~G~g-~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~ 114 (258)
.|..|+++|+| ++|...++-+...|+ +|+++.|.++.+..+-+
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~ 49 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVK 49 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHh
Confidence 57889999985 899999999999999 99999999988776544
No 479
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=96.10 E-value=0.043 Score=42.84 Aligned_cols=36 Identities=28% Similarity=0.421 Sum_probs=29.8
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCeEEE-EcCCc
Q 025101 70 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIG-VDVIS 106 (258)
Q Consensus 70 ~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~-~~~~~ 106 (258)
-.|.+|+|.|.|.+|+.+++.+...|. ++++ .+.+.
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~-~vV~vsD~~g 57 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGG-KVLAVSDPDG 57 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 368899999999999999999999998 5555 45444
No 480
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.10 E-value=0.045 Score=43.45 Aligned_cols=79 Identities=16% Similarity=0.158 Sum_probs=47.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEE-EcCCcchHHH----HHhcCCce-E--EcCCCCCCccHHHHHHHhcC-
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIG-VDVISEKFEI----GKRFGVTE-F--VNSKNCGDKSVSQIIIDMTD- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~-~~~~~~~~~~----~~~~g~~~-v--i~~~~~~~~~~~~~i~~~~~- 140 (258)
++.++||+|+ |.+|..+++.+...|+ +|++ ..++.++.+. ++..+... + .|..+ .+++...+.+...
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 79 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD--VEKIKEMFAQIDEE 79 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4678999987 8999999999988999 7765 4666555432 22334321 2 23222 1222222322221
Q ss_pred -CCCCEEEEecCC
Q 025101 141 -GGADYCFECVGL 152 (258)
Q Consensus 141 -~~~d~v~d~~g~ 152 (258)
+++|++|.+.|.
T Consensus 80 ~~~id~vi~~ag~ 92 (250)
T PRK08063 80 FGRLDVFVNNAAS 92 (250)
T ss_pred cCCCCEEEECCCC
Confidence 268999998873
No 481
>PLN00016 RNA-binding protein; Provisional
Probab=96.10 E-value=0.081 Score=45.07 Aligned_cols=95 Identities=16% Similarity=0.126 Sum_probs=59.2
Q ss_pred CCEEEEE----cc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHH-----------HHhcCCceEEcCCCCCCccHHHHH
Q 025101 72 GSTVVIF----GL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-----------GKRFGVTEFVNSKNCGDKSVSQII 135 (258)
Q Consensus 72 g~~vlI~----G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~-----------~~~~g~~~vi~~~~~~~~~~~~~i 135 (258)
..+|||+ |+ |-+|..+++.+...|. +|++++++++.... +...|+..+. .++.+ +
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d-~ 122 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-------GDPAD-V 122 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-------ecHHH-H
Confidence 4689999 97 9999999988888898 99999988764321 1123343222 12222 2
Q ss_pred HHhcCC-CCCEEEEecCChh-hHHHHHHhhhcC-CceEEEecc
Q 025101 136 IDMTDG-GADYCFECVGLAS-LVQEAYACCRKG-WGKTIVLGV 175 (258)
Q Consensus 136 ~~~~~~-~~d~v~d~~g~~~-~~~~~~~~l~~~-~G~~v~~g~ 175 (258)
.+.... ++|+||++.+... .....++.+... -.+++.++.
T Consensus 123 ~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 123 KSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred HhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 222223 7999999876432 244555655543 136777664
No 482
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=96.10 E-value=0.012 Score=45.96 Aligned_cols=105 Identities=18% Similarity=0.246 Sum_probs=63.3
Q ss_pred hcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCceEEcCCC-------CC----CccHHH
Q 025101 66 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVNSKN-------CG----DKSVSQ 133 (258)
Q Consensus 66 ~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~-------~~----~~~~~~ 133 (258)
.....++.+|||-|+|. |+-+..|+. .|+ +|++++-++.-.+.+ ++.+......... .. ..++.+
T Consensus 32 ~l~~~~~~rvLvPgCG~-g~D~~~La~-~G~-~VvGvDls~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gDfF~ 108 (218)
T PF05724_consen 32 SLALKPGGRVLVPGCGK-GYDMLWLAE-QGH-DVVGVDLSPTAIEQAFEENNLEPTVTSVGGFKRYQAGRITIYCGDFFE 108 (218)
T ss_dssp HHTTSTSEEEEETTTTT-SCHHHHHHH-TTE-EEEEEES-HHHHHHHHHHCTTEEECTTCTTEEEETTSSEEEEES-TTT
T ss_pred hcCCCCCCeEEEeCCCC-hHHHHHHHH-CCC-eEEEEecCHHHHHHHHHHhccCCCcccccceeeecCCceEEEEccccc
Confidence 35667888999999985 677777776 599 999999999888776 3343211111000 00 001111
Q ss_pred HHHHhcCCCCCEEEEecCC--------hhhHHHHHHhhhcCCceEEEecc
Q 025101 134 IIIDMTDGGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVLGV 175 (258)
Q Consensus 134 ~i~~~~~~~~d~v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g~ 175 (258)
+.....|.||+|+|...- +.-++.+.+.++|+ |++.++..
T Consensus 109 -l~~~~~g~fD~iyDr~~l~Alpp~~R~~Ya~~l~~ll~p~-g~~lLi~l 156 (218)
T PF05724_consen 109 -LPPEDVGKFDLIYDRTFLCALPPEMRERYAQQLASLLKPG-GRGLLITL 156 (218)
T ss_dssp -GGGSCHHSEEEEEECSSTTTS-GGGHHHHHHHHHHCEEEE-EEEEEEEE
T ss_pred -CChhhcCCceEEEEecccccCCHHHHHHHHHHHHHHhCCC-CcEEEEEE
Confidence 111111269999996543 22367888899999 99655553
No 483
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.09 E-value=0.044 Score=46.33 Aligned_cols=81 Identities=21% Similarity=0.261 Sum_probs=47.7
Q ss_pred CCCCEEEEEcc-CHHHHH--HHHHHHHcCCCeEEEEcCCcc--h--------------HHHHHhcCCc-eEEcCCCCCCc
Q 025101 70 EVGSTVVIFGL-GSIGLA--VAEGARLCGATRIIGVDVISE--K--------------FEIGKRFGVT-EFVNSKNCGDK 129 (258)
Q Consensus 70 ~~g~~vlI~G~-g~~G~~--a~~l~~~~g~~~v~~~~~~~~--~--------------~~~~~~~g~~-~vi~~~~~~~~ 129 (258)
.-|+++||+|+ +++|++ .++.+ ..|+ +|++++...+ + .+.+++.|.. ..++-+-.+++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 34579999986 799999 56666 7899 8888764221 1 2234556643 22322221122
Q ss_pred cHH---HHHHHhcCCCCCEEEEecCCh
Q 025101 130 SVS---QIIIDMTDGGADYCFECVGLA 153 (258)
Q Consensus 130 ~~~---~~i~~~~~~~~d~v~d~~g~~ 153 (258)
... +.+.+.. |++|+++.+.+.+
T Consensus 117 ~v~~lie~I~e~~-G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDL-GQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhc-CCCCEEEECCccC
Confidence 232 3333333 3799999998876
No 484
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=96.09 E-value=0.05 Score=44.59 Aligned_cols=57 Identities=21% Similarity=0.257 Sum_probs=46.2
Q ss_pred hhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEE---cCCcchHHHHHhcCCceEEc
Q 025101 65 RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV---DVISEKFEIGKRFGVTEFVN 122 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~---~~~~~~~~~~~~~g~~~vi~ 122 (258)
....+.+|.+.||=.. |.+|..++-+++..|+ +++++ ..+.||...++.+|+..+..
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~t 156 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIILT 156 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEec
Confidence 3456889999999985 8999999999999999 88877 34557888899999865543
No 485
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=96.08 E-value=0.045 Score=46.18 Aligned_cols=102 Identities=23% Similarity=0.327 Sum_probs=65.5
Q ss_pred hhcCCCCCCEEEEEc-c-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCce--EEcCCCCCCccHHHHHH
Q 025101 65 RTANVEVGSTVVIFG-L-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE--FVNSKNCGDKSVSQIII 136 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G-~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~--vi~~~~~~~~~~~~~i~ 136 (258)
....+++|+.||=.- + |+=-..+++++..-|. .|++++.++.|.+.+ +.+|... +++... ..+..
T Consensus 150 ~~L~p~pge~VlD~cAAPGGKTthla~~~~~~~~-iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~---~~~~~--- 222 (355)
T COG0144 150 LVLDPKPGERVLDLCAAPGGKTTHLAELMENEGA-IVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDA---RRLAE--- 222 (355)
T ss_pred HHcCCCCcCEEEEECCCCCCHHHHHHHhcCCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCceEEEeccc---ccccc---
Confidence 467889999999883 3 5433444455554456 689999999998776 4588764 333322 11111
Q ss_pred HhcCC-CCCEEE-E--ecCChh-------------------------hHHHHHHhhhcCCceEEEec
Q 025101 137 DMTDG-GADYCF-E--CVGLAS-------------------------LVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 137 ~~~~~-~~d~v~-d--~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g 174 (258)
....+ .||.|+ | |+|... .+..++..++++ |+++...
T Consensus 223 ~~~~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~G-G~LVYST 288 (355)
T COG0144 223 LLPGGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPG-GVLVYST 288 (355)
T ss_pred cccccCcCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEc
Confidence 11122 499987 6 666522 577889999998 9987544
No 486
>PLN02928 oxidoreductase family protein
Probab=96.08 E-value=0.063 Score=45.16 Aligned_cols=95 Identities=23% Similarity=0.381 Sum_probs=57.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcC-----CceEEcCCCCCCccHHHHHHHhcCCCCCE
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-----VTEFVNSKNCGDKSVSQIIIDMTDGGADY 145 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g-----~~~vi~~~~~~~~~~~~~i~~~~~~~~d~ 145 (258)
.|+++.|+|.|.+|..+++.++.+|. +|++.+++..+... ..++ ...+.+... ...++.+.+. ..|+
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~L~ell~-----~aDi 229 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKG-GHEDIYEFAG-----EADI 229 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccC-cccCHHHHHh-----hCCE
Confidence 57899999999999999999999999 99999886432211 1110 000110000 0123333332 4788
Q ss_pred EEEecCCh-h----hHHHHHHhhhcCCceEEEec
Q 025101 146 CFECVGLA-S----LVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 146 v~d~~g~~-~----~~~~~~~~l~~~~G~~v~~g 174 (258)
|+.+.... . .-...+..++++ ..+|.++
T Consensus 230 Vvl~lPlt~~T~~li~~~~l~~Mk~g-a~lINva 262 (347)
T PLN02928 230 VVLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIA 262 (347)
T ss_pred EEECCCCChHhhcccCHHHHhcCCCC-eEEEECC
Confidence 88876532 1 123566777777 7777665
No 487
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.07 E-value=0.05 Score=43.63 Aligned_cols=78 Identities=18% Similarity=0.195 Sum_probs=47.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcC-CcchHHHH-Hh----cCCc-eE--EcCCCCCCccHHHHHHHhcC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG-KR----FGVT-EF--VNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~-~~~~~~~~-~~----~g~~-~v--i~~~~~~~~~~~~~i~~~~~ 140 (258)
+|+++||+|+ +++|.+++..+...|+ +|+.+.+ ++++.+.+ ++ .+.. .. .|..+ .+++.+.+.+...
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~ 83 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE--PETYKELFKKIDE 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHH
Confidence 5789999987 8999999998888999 8887754 44443322 22 2322 12 23333 1233333333222
Q ss_pred --CCCCEEEEecC
Q 025101 141 --GGADYCFECVG 151 (258)
Q Consensus 141 --~~~d~v~d~~g 151 (258)
+.+|+++.+.|
T Consensus 84 ~~g~id~lv~nAg 96 (260)
T PRK08416 84 DFDRVDFFISNAI 96 (260)
T ss_pred hcCCccEEEECcc
Confidence 36999998875
No 488
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=96.07 E-value=0.095 Score=43.23 Aligned_cols=37 Identities=24% Similarity=0.355 Sum_probs=30.3
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCeEEEEcCCcchH
Q 025101 71 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKF 109 (258)
Q Consensus 71 ~g~~vlI~G~---g~~G~~a~~l~~~~g~~~v~~~~~~~~~~ 109 (258)
.|+++||+|+ .++|.++++.+...|+ +|++ .+..+++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~~~~l 47 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTWVPAL 47 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeCcchh
Confidence 5889999987 7999999999999999 8887 4454443
No 489
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=96.07 E-value=0.12 Score=43.64 Aligned_cols=94 Identities=19% Similarity=0.234 Sum_probs=61.6
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHc--CCCeEEEEc--CCcchH-HHHHhcCCceEEcCCCCCCccHHH-------------
Q 025101 73 STVVIFGL-GSIGLAVAEGARLC--GATRIIGVD--VISEKF-EIGKRFGVTEFVNSKNCGDKSVSQ------------- 133 (258)
Q Consensus 73 ~~vlI~G~-g~~G~~a~~l~~~~--g~~~v~~~~--~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~------------- 133 (258)
++|.|+|+ |++|..++...+.. .+ +|++++ ++.++. +.++++++..+.-.++ ....
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~----~~~~~l~~~l~~~~~~v 76 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADE----EAAKELKEALAAAGIEV 76 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHhhccCCceE
Confidence 47899996 99999999988765 56 787775 333333 4556788765543332 1122
Q ss_pred -----HHHHhcCC-CCCEEEEecCChhhHHHHHHhhhcCCceEEE
Q 025101 134 -----IIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIV 172 (258)
Q Consensus 134 -----~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 172 (258)
.+.++... .+|+|+.++++...+...+..++.| -++.+
T Consensus 77 ~~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL 120 (385)
T PRK05447 77 LAGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL 120 (385)
T ss_pred EEChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence 22223333 6999999998876688888888875 55443
No 490
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.06 E-value=0.1 Score=40.13 Aligned_cols=35 Identities=31% Similarity=0.455 Sum_probs=30.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 105 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~ 105 (258)
.+.+|+|+|+|++|.-.++-+-..|.++++.++..
T Consensus 18 ~~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 18 RSAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred hhCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 35789999999999999999999999888888654
No 491
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.05 E-value=0.075 Score=44.10 Aligned_cols=39 Identities=18% Similarity=0.062 Sum_probs=32.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHH
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 110 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~ 110 (258)
.|++|||+|+ |.+|..+++.+...|+ +|+++.++.++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~ 43 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDRK 43 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcchH
Confidence 4789999986 9999999988888899 8988887766543
No 492
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.05 E-value=0.1 Score=36.88 Aligned_cols=94 Identities=23% Similarity=0.340 Sum_probs=51.5
Q ss_pred EEEEEcc-CHHHHHHHHHHHH-cCCCeEEE-EcCCcch---HHHHHhcCCceEEcCCCCCCccHHHHHHHhcCCCCCEEE
Q 025101 74 TVVIFGL-GSIGLAVAEGARL-CGATRIIG-VDVISEK---FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF 147 (258)
Q Consensus 74 ~vlI~G~-g~~G~~a~~l~~~-~g~~~v~~-~~~~~~~---~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~d~v~ 147 (258)
+|.|+|+ |-+|.++++.+.. -+. .+.+ ++++++. .+.-.-.|.... . ....+.+.+... .+|+++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~-~lv~~v~~~~~~~~g~d~g~~~~~~~~----~---~~v~~~l~~~~~-~~DVvI 72 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGF-ELVGAVDRKPSAKVGKDVGELAGIGPL----G---VPVTDDLEELLE-EADVVI 72 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTE-EEEEEEETTTSTTTTSBCHHHCTSST-----S---SBEBS-HHHHTT-H-SEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCc-EEEEEEecCCcccccchhhhhhCcCCc----c---cccchhHHHhcc-cCCEEE
Confidence 6889998 9999999999987 577 5444 4555411 111111221100 0 001112333333 389999
Q ss_pred EecCChhhHHHHHHhhhcCCceEEEecccCC
Q 025101 148 ECVGLASLVQEAYACCRKGWGKTIVLGVDQP 178 (258)
Q Consensus 148 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 178 (258)
|.+ .+..+...++.+... |.-+.+|+.+.
T Consensus 73 DfT-~p~~~~~~~~~~~~~-g~~~ViGTTG~ 101 (124)
T PF01113_consen 73 DFT-NPDAVYDNLEYALKH-GVPLVIGTTGF 101 (124)
T ss_dssp EES--HHHHHHHHHHHHHH-T-EEEEE-SSS
T ss_pred EcC-ChHHhHHHHHHHHhC-CCCEEEECCCC
Confidence 999 444466666666666 77777886643
No 493
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=96.05 E-value=0.036 Score=44.24 Aligned_cols=96 Identities=14% Similarity=0.131 Sum_probs=63.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC----c------eEEcCCCCCCccHHHHHHHhcC
Q 025101 71 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV----T------EFVNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 71 ~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~----~------~vi~~~~~~~~~~~~~i~~~~~ 140 (258)
..++|||+|.|. |..+-++++.....+|.+++-+++-.+.++++-. . +++. .+-...+++...
T Consensus 76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~------~Dg~~~l~~~~~ 148 (246)
T PF01564_consen 76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII------GDGRKFLKETQE 148 (246)
T ss_dssp ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE------STHHHHHHTSSS
T ss_pred CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE------hhhHHHHHhccC
Confidence 679999998754 6667788887666699999999988888877321 1 2221 345555655433
Q ss_pred CCCCEEE-EecCC---------hhhHHHHHHhhhcCCceEEEec
Q 025101 141 GGADYCF-ECVGL---------ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 141 ~~~d~v~-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g 174 (258)
..+|+|+ |.... ..-++.+.+.|+++ |.++.-.
T Consensus 149 ~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~ 191 (246)
T PF01564_consen 149 EKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA 191 (246)
T ss_dssp T-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred CcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence 2799998 65541 23477888999999 9887654
No 494
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.03 E-value=0.05 Score=43.33 Aligned_cols=77 Identities=19% Similarity=0.221 Sum_probs=47.9
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCc-eE--EcCCCCCCccHHHHHHHhcC--CC
Q 025101 73 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GG 142 (258)
Q Consensus 73 ~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~-~v--i~~~~~~~~~~~~~i~~~~~--~~ 142 (258)
++++|+|+ |++|..+++.+...|+ +|+.+.+++++.+.+ ++.+.. .+ .|-.+ .+++.+.+.+... +.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD--KDQVFSAIDQAAEKFGG 77 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcCC
Confidence 36899986 8999999988888999 899998886654332 233422 12 23322 1222222333221 26
Q ss_pred CCEEEEecCC
Q 025101 143 ADYCFECVGL 152 (258)
Q Consensus 143 ~d~v~d~~g~ 152 (258)
+|++|.+.|.
T Consensus 78 id~vi~~ag~ 87 (254)
T TIGR02415 78 FDVMVNNAGV 87 (254)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 495
>PRK14968 putative methyltransferase; Provisional
Probab=96.02 E-value=0.08 Score=40.08 Aligned_cols=43 Identities=30% Similarity=0.475 Sum_probs=33.3
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh
Q 025101 69 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 114 (258)
Q Consensus 69 ~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~ 114 (258)
..+++++|..|+|. |..+..+++. +. ++++++.+++..+.+++
T Consensus 21 ~~~~~~vLd~G~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~ 63 (188)
T PRK14968 21 DKKGDRVLEVGTGS-GIVAIVAAKN-GK-KVVGVDINPYAVECAKC 63 (188)
T ss_pred ccCCCEEEEEcccc-CHHHHHHHhh-cc-eEEEEECCHHHHHHHHH
Confidence 36788999998764 6677777776 76 99999999887776643
No 496
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=96.02 E-value=0.028 Score=45.20 Aligned_cols=76 Identities=17% Similarity=0.287 Sum_probs=48.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCc-eEEcCCCCCCccHHHHHHHhcC--CCCCEE
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADYC 146 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~v 146 (258)
+++++||+|+ |++|.++++.+...|+ +|+.+++++++.+. .... ...|..+ .+++.+.+.+... +.+|++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~id~l 81 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS--AEEVNHTVAEIIEKFGRIDGL 81 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4688999986 8999999999988999 89998877655321 1111 1123333 1223333332221 268999
Q ss_pred EEecCC
Q 025101 147 FECVGL 152 (258)
Q Consensus 147 ~d~~g~ 152 (258)
+.+.|.
T Consensus 82 i~~Ag~ 87 (266)
T PRK06171 82 VNNAGI 87 (266)
T ss_pred EECCcc
Confidence 998873
No 497
>PRK05855 short chain dehydrogenase; Validated
Probab=96.01 E-value=0.037 Score=49.73 Aligned_cols=79 Identities=20% Similarity=0.253 Sum_probs=51.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCc-eE--EcCCCCCCccHHHHHHHhcC--
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 140 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~-~v--i~~~~~~~~~~~~~i~~~~~-- 140 (258)
.+.++||+|+ |++|..+++.+...|+ +|++++++.++.+.+ ++.|.. .+ .|..+ .+...+.+.+...
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD--ADAMEAFAEWVRAEH 390 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 4678999987 8999999888888999 899999988776543 233432 12 23333 1222223332221
Q ss_pred CCCCEEEEecCC
Q 025101 141 GGADYCFECVGL 152 (258)
Q Consensus 141 ~~~d~v~d~~g~ 152 (258)
+.+|++|++.|.
T Consensus 391 g~id~lv~~Ag~ 402 (582)
T PRK05855 391 GVPDIVVNNAGI 402 (582)
T ss_pred CCCcEEEECCcc
Confidence 369999998875
No 498
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.01 E-value=0.081 Score=42.02 Aligned_cols=78 Identities=15% Similarity=0.117 Sum_probs=46.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCeEEEEcC-CcchHHHH-HhcCCc-eEE--cCCCCCCccHHHHH---HHhcCC
Q 025101 71 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG-KRFGVT-EFV--NSKNCGDKSVSQII---IDMTDG 141 (258)
Q Consensus 71 ~g~~vlI~G~-g~~G~~a~~l~~~~g~~~v~~~~~-~~~~~~~~-~~~g~~-~vi--~~~~~~~~~~~~~i---~~~~~~ 141 (258)
.++++||+|+ |++|..++..+...|+ +|+.+.+ ++++.+.+ .+++.. .++ |..+ .+++.+.+ .+..+.
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~ 80 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADELGDRAIALQADVTD--REQVQAMFATATEHFGK 80 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHHhCC
Confidence 3578999986 8999999998888899 7877654 44443333 334322 112 3222 12222223 222322
Q ss_pred CCCEEEEecC
Q 025101 142 GADYCFECVG 151 (258)
Q Consensus 142 ~~d~v~d~~g 151 (258)
++|++|.+.|
T Consensus 81 ~id~li~~ag 90 (253)
T PRK08642 81 PITTVVNNAL 90 (253)
T ss_pred CCeEEEECCC
Confidence 4999998775
No 499
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=96.00 E-value=0.14 Score=39.80 Aligned_cols=98 Identities=19% Similarity=0.261 Sum_probs=60.4
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHhcCCceEEcCCCCCCccHHHHHHHhcCC-CCCEE
Q 025101 69 VEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYC 146 (258)
Q Consensus 69 ~~~g~~vlI~G~g~~G~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v 146 (258)
+++|++||=+|+|+ |..+..+++..+. .+|++++.++.. ...++ .++..+- ......+.+.+.... .+|+|
T Consensus 49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~----~~~~v-~~i~~D~-~~~~~~~~i~~~~~~~~~D~V 121 (209)
T PRK11188 49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD----PIVGV-DFLQGDF-RDELVLKALLERVGDSKVQVV 121 (209)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc----CCCCc-EEEecCC-CChHHHHHHHHHhCCCCCCEE
Confidence 57889999999875 6666667776653 389999987621 11122 2332221 113334455544444 89999
Q ss_pred EEec-----CC------------hhhHHHHHHhhhcCCceEEEec
Q 025101 147 FECV-----GL------------ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 147 ~d~~-----g~------------~~~~~~~~~~l~~~~G~~v~~g 174 (258)
+... |. ...++.+.+.|+|+ |.++..-
T Consensus 122 ~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpG-G~~vi~~ 165 (209)
T PRK11188 122 MSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPG-GSFVVKV 165 (209)
T ss_pred ecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEE
Confidence 9533 22 12467888999999 9998743
No 500
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=96.00 E-value=0.033 Score=49.05 Aligned_cols=100 Identities=15% Similarity=0.203 Sum_probs=64.7
Q ss_pred hhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhc--CCc-e-EEcCCCCCCccHHHHHHHhcC
Q 025101 65 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF--GVT-E-FVNSKNCGDKSVSQIIIDMTD 140 (258)
Q Consensus 65 ~~~~~~~g~~vlI~G~g~~G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~--g~~-~-vi~~~~~~~~~~~~~i~~~~~ 140 (258)
+...++++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++. +.. . .+... ++.. .....
T Consensus 260 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~-----d~~~--~~~~~ 330 (475)
T PLN02336 260 DKLDLKPGQKVLDVGCGI-GGGDFYMAENFDV-HVVGIDLSVNMISFALERAIGRKCSVEFEVA-----DCTK--KTYPD 330 (475)
T ss_pred HhcCCCCCCEEEEEeccC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhhcCCCceEEEEc-----Cccc--CCCCC
Confidence 344567888999999875 6677778887788 899999998887777542 211 1 11111 1110 01112
Q ss_pred CCCCEEEEecC-----C-hhhHHHHHHhhhcCCceEEEec
Q 025101 141 GGADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVLG 174 (258)
Q Consensus 141 ~~~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~g 174 (258)
+.||+|+.... . ...+..+.+.|+|+ |++++..
T Consensus 331 ~~fD~I~s~~~l~h~~d~~~~l~~~~r~Lkpg-G~l~i~~ 369 (475)
T PLN02336 331 NSFDVIYSRDTILHIQDKPALFRSFFKWLKPG-GKVLISD 369 (475)
T ss_pred CCEEEEEECCcccccCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence 26999986321 1 34578999999999 9988664
Done!