Query 025108
Match_columns 257
No_of_seqs 181 out of 334
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 03:54:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025108.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025108hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fs1_A SKP2 F-BOX, cyclin A/CD 97.2 0.00011 3.7E-09 49.5 1.5 42 12-54 5-46 (53)
2 3l2o_B F-box only protein 4; s 93.7 0.0086 2.9E-07 54.9 -0.8 34 16-50 5-38 (312)
3 2e31_A FBS1, F-box only protei 92.8 0.034 1.2E-06 50.6 1.6 36 14-50 49-85 (297)
4 1dyo_A Endo-1,4-beta-xylanase 91.9 4.2 0.00014 32.8 13.9 93 156-254 64-158 (160)
5 2ast_B S-phase kinase-associat 91.7 0.047 1.6E-06 47.7 1.0 47 12-59 5-51 (336)
6 2ovr_B FBW7, F-BOX/WD repeat p 90.4 0.076 2.6E-06 47.9 1.2 36 14-50 17-52 (445)
7 3v7d_B Cell division control p 89.6 0.054 1.9E-06 48.8 -0.5 48 2-50 1-48 (464)
8 1p22_A F-BOX/WD-repeat protein 81.2 0.27 9.1E-06 44.3 -0.4 34 16-50 11-48 (435)
9 2p1m_B Transport inhibitor res 80.8 0.39 1.3E-05 45.1 0.6 37 14-50 4-40 (594)
10 3ogk_B Coronatine-insensitive 75.7 1 3.5E-05 42.2 1.8 36 15-50 12-47 (592)
11 2w5f_A Endo-1,4-beta-xylanase 58.8 1.1E+02 0.0039 29.2 12.4 91 154-253 77-170 (540)
12 3b83_A Ten-D3; beta sheet, com 33.1 77 0.0026 22.2 5.2 35 155-192 60-94 (100)
13 3qwq_B Adnectin; cell surface 24.4 1.4E+02 0.005 21.7 5.5 36 154-189 61-102 (114)
14 2lde_A Sarafotoxin-I3; endothe 24.2 15 0.00053 21.3 -0.1 10 111-120 17-26 (26)
15 2dju_A Receptor-type tyrosine- 23.4 1.8E+02 0.0061 19.7 7.5 13 156-168 67-79 (106)
16 1gui_A Laminarinase 16A; carbo 20.6 2.8E+02 0.0097 21.0 12.7 84 156-252 68-155 (155)
17 1x5a_A Ephrin type-A receptor 20.2 1.1E+02 0.0039 21.7 4.1 20 152-171 64-83 (107)
No 1
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=97.19 E-value=0.00011 Score=49.45 Aligned_cols=42 Identities=12% Similarity=-0.017 Sum_probs=34.2
Q ss_pred CccCCCCCCcchhhhhcccccCcccchhhhhcchhhhhhCcCC
Q 025108 12 SQLQPNEKPSQNESQNFAIAAKPADNTKETKVCEAKEAEVKLP 54 (257)
Q Consensus 12 ~~~~~~~lp~~~~~~~~~~~~~p~d~cr~a~v~~af~~~~fLP 54 (257)
....+.+||++++.+|+++ .+|.|.++++.||+.++....-|
T Consensus 5 ~~~~~~~LP~eil~~I~~~-L~~~dl~~~~~Vck~w~~~~~~~ 46 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSC-LCLPELLKVSGVCKRWYRLASDE 46 (53)
T ss_dssp ----CCSSCHHHHHHHHTT-SCGGGHHHHHTTCHHHHHHHTCG
T ss_pred CCCCHHHCCHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHhCCh
Confidence 3567899999999999999 89999999999999999765433
No 2
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=93.73 E-value=0.0086 Score=54.92 Aligned_cols=34 Identities=9% Similarity=-0.012 Sum_probs=32.2
Q ss_pred CCCCCcchhhhhcccccCcccchhhhhcchhhhhh
Q 025108 16 PNEKPSQNESQNFAIAAKPADNTKETKVCEAKEAE 50 (257)
Q Consensus 16 ~~~lp~~~~~~~~~~~~~p~d~cr~a~v~~af~~~ 50 (257)
+++||.+++-+|||+ .+|+|+||++.||+..|..
T Consensus 5 l~~LP~ei~l~Ilsf-L~p~DL~~l~~vcr~Wr~l 38 (312)
T 3l2o_B 5 LTRLPIDVQLYILSF-LSPHDLCQLGSTNHYWNET 38 (312)
T ss_dssp HHHSCHHHHHHHHHT-SCHHHHHHHHTTCHHHHHH
T ss_pred hHhCCHHHHHHHHhc-CCHHHHHHHHHHHHHHHHH
Confidence 678999999999999 9999999999999999984
No 3
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=92.80 E-value=0.034 Score=50.59 Aligned_cols=36 Identities=14% Similarity=-0.047 Sum_probs=33.8
Q ss_pred cCCCCCCcchhhhhcccccCcccch-hhhhcchhhhhh
Q 025108 14 LQPNEKPSQNESQNFAIAAKPADNT-KETKVCEAKEAE 50 (257)
Q Consensus 14 ~~~~~lp~~~~~~~~~~~~~p~d~c-r~a~v~~af~~~ 50 (257)
..++.||++.+..||++ ..|++.+ |++.||+.++..
T Consensus 49 ~~~~~LP~ell~~Il~~-Lp~~~L~~r~~~VCk~Wr~l 85 (297)
T 2e31_A 49 EYLAELPEPLLLRVLAE-LPATELVQACRLVCLRWKEL 85 (297)
T ss_dssp CCTTSSCHHHHHHHHHT-SCHHHHHHTGGGTCHHHHHH
T ss_pred cChhhCCHHHHHHHHHc-CCHHHHHHHHHHHhHHHHHH
Confidence 57889999999999999 8999999 999999999984
No 4
>1dyo_A Endo-1,4-beta-xylanase Y; carbohydrate-binding module, xylan-binding; 2.1A {Clostridium thermocellum} SCOP: b.18.1.7 PDB: 1h6y_A 1h6x_A
Probab=91.88 E-value=4.2 Score=32.75 Aligned_cols=93 Identities=15% Similarity=0.244 Sum_probs=57.9
Q ss_pred cCCCCceEEEEEEEEEeCCCCCceeceEEEEEe--cCCeeeeeEEeeecCCCCCeEEEeeeeEEeCCCCCeEEEEEEEEE
Q 025108 156 KLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLL--PNGTKQEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEISMYEY 233 (257)
Q Consensus 156 ~LSP~t~Y~ay~v~kl~~~~~Gwd~Pv~~~v~~--~~g~~~~~~~~l~~~~~dgW~EielGeF~~~~~~~~eV~fsl~E~ 233 (257)
.|.||++|.+..-+++.+..- ...+.+.+.. .+|..+.....-.....++|.+++-|.|...... ..+.|-+ |
T Consensus 64 ~l~~g~~Y~~Sa~V~~~~g~~--~~~v~~~l~~~~~~g~~~y~~i~~~~~~~~~W~~L~G~~ft~~~~~-~~~~lyv-e- 138 (160)
T 1dyo_A 64 TFVPGNTYCFSVVASFIEGAS--STTFCMKLQYVDGSGTQRYDTIDMKTVGPNQWVHLYNPQYRIPSDA-TDMYVYV-E- 138 (160)
T ss_dssp TSCTTCEEEEEEEEECCSSSS--CEEEEEEEEEECTTSCEEEEEEEEEEECSSCCEEEEEEEEECCTTC-EEEEEEE-E-
T ss_pred hccCCCEEEEEEEEEECCCCC--ceeEEEEEEEEcCCCCEEEEEEeeEEEcCCccEEEECcEEEeCCCC-CEEEEEE-E-
Confidence 588999999999999876431 1234444443 3454332222111235789999998899986542 3343322 3
Q ss_pred eCCeeeeeEEEEEEEEEecCC
Q 025108 234 EGGKWKKGLVVKGVIIRPKNQ 254 (257)
Q Consensus 234 ~~~~wK~GLiv~GieIRPk~~ 254 (257)
+..-..=+.|+.|.|.|...
T Consensus 139 -~~~~~~d~yiDdv~i~~~g~ 158 (160)
T 1dyo_A 139 -TADDTINFYIDEAIGAVAGT 158 (160)
T ss_dssp -ESSCCCCEEEEEEEEEETTC
T ss_pred -CCCCCccEEEEEEEEEeCcc
Confidence 23345668999999999754
No 5
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=91.66 E-value=0.047 Score=47.69 Aligned_cols=47 Identities=11% Similarity=0.049 Sum_probs=39.0
Q ss_pred CccCCCCCCcchhhhhcccccCcccchhhhhcchhhhhhCcCCCCchh
Q 025108 12 SQLQPNEKPSQNESQNFAIAAKPADNTKETKVCEAKEAEVKLPHMYEA 59 (257)
Q Consensus 12 ~~~~~~~lp~~~~~~~~~~~~~p~d~cr~a~v~~af~~~~fLP~dy~~ 59 (257)
.+..+++||++++.+|+++ -+++|.++++.||+.++...+-|.-+..
T Consensus 5 ~~~~~~~LP~eil~~If~~-L~~~d~~~~~~vc~~W~~~~~~~~~~~~ 51 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSC-LCLPELLKVSGVCKRWYRLASDESLWQT 51 (336)
T ss_dssp --CCSSSSCHHHHHHHHTT-SCHHHHHHTTSSCHHHHHHHTCSTTSSE
T ss_pred ccCChhhCCHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHhcCchhhee
Confidence 4567899999999999999 8999999999999999987665654443
No 6
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=90.43 E-value=0.076 Score=47.85 Aligned_cols=36 Identities=11% Similarity=0.053 Sum_probs=32.9
Q ss_pred cCCCCCCcchhhhhcccccCcccchhhhhcchhhhhh
Q 025108 14 LQPNEKPSQNESQNFAIAAKPADNTKETKVCEAKEAE 50 (257)
Q Consensus 14 ~~~~~lp~~~~~~~~~~~~~p~d~cr~a~v~~af~~~ 50 (257)
--++.||++++.+||++ ..|.|.|+++.||+.++..
T Consensus 17 d~~~~lp~e~~~~i~~~-l~~~~l~~~~~v~~~~~~~ 52 (445)
T 2ovr_B 17 DFISLLPKELALYVLSF-LEPKDLLQAAQTCRYWRIL 52 (445)
T ss_dssp STTTSSCHHHHHHHHTT-SCHHHHHHHTTSCHHHHHH
T ss_pred ChhHHCCHHHHHHHHHh-CCHHHHHHHHHHhHHHHhh
Confidence 35789999999999999 8999999999999999874
No 7
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=89.58 E-value=0.054 Score=48.78 Aligned_cols=48 Identities=15% Similarity=0.071 Sum_probs=34.5
Q ss_pred CCCCCCCCCCCccCCCCCCcchhhhhcccccCcccchhhhhcchhhhhh
Q 025108 2 GTGSSKEDSSSQLQPNEKPSQNESQNFAIAAKPADNTKETKVCEAKEAE 50 (257)
Q Consensus 2 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~p~d~cr~a~v~~af~~~ 50 (257)
|+|+.-++.-..--+..||++++.+||++ ..|.|.||++.||+.++..
T Consensus 1 ~~~~~~~~~~~~d~~~~lp~~~~~~i~~~-l~~~~l~~~~~v~~~w~~~ 48 (464)
T 3v7d_B 1 GAGTLIKDNLKRDLITSLPFEISLKIFNY-LQFEDIINSLGVSQNWNKI 48 (464)
T ss_dssp --------CCCCCHHHHSCHHHHHHHHTT-SCHHHHHHHHTTCHHHHHH
T ss_pred CCCcccCcccccCChHHCCHHHHHHHHhc-CCHHHHHHHHHHHHHHHHH
Confidence 34444444444445678999999999999 8999999999999999874
No 8
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=81.21 E-value=0.27 Score=44.27 Aligned_cols=34 Identities=9% Similarity=0.049 Sum_probs=30.9
Q ss_pred CCCCCcc----hhhhhcccccCcccchhhhhcchhhhhh
Q 025108 16 PNEKPSQ----NESQNFAIAAKPADNTKETKVCEAKEAE 50 (257)
Q Consensus 16 ~~~lp~~----~~~~~~~~~~~p~d~cr~a~v~~af~~~ 50 (257)
+..||++ .+.+||++ ..|.|.||++.||+.++..
T Consensus 11 ~~~lp~e~~~~~~~~i~~~-l~~~~l~~~~~v~~~w~~~ 48 (435)
T 1p22_A 11 ITALPARGLDHIAENILSY-LDAKSLCAAELVCKEWYRV 48 (435)
T ss_dssp HHHTGGGTCHHHHHHHHTT-CCHHHHHHHHHHCHHHHHH
T ss_pred HHHCCcchHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHH
Confidence 4679999 99999999 8999999999999999863
No 9
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=80.80 E-value=0.39 Score=45.05 Aligned_cols=37 Identities=14% Similarity=0.093 Sum_probs=27.9
Q ss_pred cCCCCCCcchhhhhcccccCcccchhhhhcchhhhhh
Q 025108 14 LQPNEKPSQNESQNFAIAAKPADNTKETKVCEAKEAE 50 (257)
Q Consensus 14 ~~~~~lp~~~~~~~~~~~~~p~d~cr~a~v~~af~~~ 50 (257)
-.+++||++++.+|+++..+++|+++++.||+.++..
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 3578999999999999845599999999999988864
No 10
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=75.73 E-value=1 Score=42.22 Aligned_cols=36 Identities=14% Similarity=0.077 Sum_probs=31.0
Q ss_pred CCCCCCcchhhhhcccccCcccchhhhhcchhhhhh
Q 025108 15 QPNEKPSQNESQNFAIAAKPADNTKETKVCEAKEAE 50 (257)
Q Consensus 15 ~~~~lp~~~~~~~~~~~~~p~d~cr~a~v~~af~~~ 50 (257)
...+||++++.+|+++.+.++|+++++.||+.++..
T Consensus 12 ~~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred ccCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 345899999999999855999999999999887653
No 11
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A*
Probab=58.84 E-value=1.1e+02 Score=29.15 Aligned_cols=91 Identities=14% Similarity=0.200 Sum_probs=52.7
Q ss_pred cCcCCCCceEEEEEEEEEeCCCCCceeceEEEEEecCC---eeeeeEEeeecCCCCCeEEEeeeeEEeCCCCCeEEEEEE
Q 025108 154 TTKLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNG---TKQEHKENLIVKPRNQWIEIPVGEFKSTPENAGEMEISM 230 (257)
Q Consensus 154 t~~LSP~t~Y~ay~v~kl~~~~~Gwd~Pv~~~v~~~~g---~~~~~~~~l~~~~~dgW~EielGeF~~~~~~~~eV~fsl 230 (257)
+..|.||++|...+-+|. +. +-..++.+++...++ ........-...+.++|.+++ |.|..... ...+++-+
T Consensus 77 ~~~l~~G~~Y~fSawVk~-~g--~~~~~v~l~l~~~d~~~~~~~~~~i~~~~~~~g~Wt~L~-g~ft~p~~-~~~~~lyv 151 (540)
T 2w5f_A 77 GFYLDGGVEYKYSVFVKH-NG--TGTETFKLSVSYLDSETEEENKEVIATKDVVAGEWTEIS-AKYKAPKT-AVNITLSI 151 (540)
T ss_dssp TTTCCTTCEEEEEEEEEC-CS--SSEEEEEEEEEEEETTTCCEEEEEEEEEEEETTCCEEEE-EEEECCTT-EEEEEEEE
T ss_pred cceecCCCEEEEEEEEEe-CC--CCCceEEEEEEEecCCCCCceEEEeeEEEEeCCeeEEEE-eEEEecCC-CeEEEEEE
Confidence 346889999999988885 21 112355555543222 111111111123578999999 79987543 24444433
Q ss_pred EEEeCCeeeeeEEEEEEEEEecC
Q 025108 231 YEYEGGKWKKGLVVKGVIIRPKN 253 (257)
Q Consensus 231 ~E~~~~~wK~GLiv~GieIRPk~ 253 (257)
|.. -..-+.|+.|.|.++.
T Consensus 152 -e~~---~~~~f~vDdvsl~~~~ 170 (540)
T 2w5f_A 152 -TTD---STVDFIFDDVTITRKG 170 (540)
T ss_dssp -EES---SCCCEEEEEEEEEEC-
T ss_pred -EcC---CCCCEEEEEEEEecCc
Confidence 332 2457889999987654
No 12
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=33.09 E-value=77 Score=22.24 Aligned_cols=35 Identities=26% Similarity=0.323 Sum_probs=24.6
Q ss_pred CcCCCCceEEEEEEEEEeCCCCCceeceEEEEEecCCe
Q 025108 155 TKLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNGT 192 (257)
Q Consensus 155 ~~LSP~t~Y~ay~v~kl~~~~~Gwd~Pv~~~v~~~~g~ 192 (257)
..|.|+|.|.+.+.-.- ..|...|+.....+.-|+
T Consensus 60 ~~L~p~t~Y~~~V~A~n---~~g~s~p~~~~~~~~~~~ 94 (100)
T 3b83_A 60 TNLEPNTTYEIRIVARN---GQQYSPPVSTTFTTGSLE 94 (100)
T ss_dssp CSCCTTCEEEEEEEEEE---TTEECCCEEEEEECCCCC
T ss_pred CCCCCCCEEEEEEEEEe---CCCCCCCEEEEEEEEeee
Confidence 46999999998665433 347777887777765554
No 13
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=24.36 E-value=1.4e+02 Score=21.68 Aligned_cols=36 Identities=19% Similarity=0.352 Sum_probs=23.1
Q ss_pred cCcCCCCceEEEEEEEEEeCC---CCC---ceeceEEEEEec
Q 025108 154 TTKLSPGISYEVLFVIMLKDP---AYG---WEVPVSLRLLLP 189 (257)
Q Consensus 154 t~~LSP~t~Y~ay~v~kl~~~---~~G---wd~Pv~~~v~~~ 189 (257)
...|.|+|.|.+.+.-.-... ..+ .+.|+.+++++.
T Consensus 61 l~gL~P~T~Y~v~V~A~~~~G~~~~~~~T~~~~P~~l~~~T~ 102 (114)
T 3qwq_B 61 ISGLKPGVDYTITVYAVTDHKPHADGPHTYHESPISINYRTE 102 (114)
T ss_dssp ECSCCTTCEEEEEEEEEEEEESSTTSCCEEEEEEEEEEEECC
T ss_pred eCCCCCCCEEEEEEEEEECCccEEEEeEcCCCCCceeEEEec
Confidence 346999999998776554432 222 345777777663
No 14
>2lde_A Sarafotoxin-I3; endothelin-like peptide; NMR {Synthetic}
Probab=24.18 E-value=15 Score=21.26 Aligned_cols=10 Identities=20% Similarity=0.494 Sum_probs=6.7
Q ss_pred ceeeecCCCC
Q 025108 111 LLITWAEDNR 120 (257)
Q Consensus 111 L~ItWgdd~r 120 (257)
|.|+|.++|+
T Consensus 17 lDiIWvntp~ 26 (26)
T 2lde_A 17 KDVIWVNRNX 26 (26)
T ss_dssp TTCSTTTCC-
T ss_pred ccEEEecCCC
Confidence 6778877764
No 15
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.37 E-value=1.8e+02 Score=19.73 Aligned_cols=13 Identities=31% Similarity=0.347 Sum_probs=10.2
Q ss_pred cCCCCceEEEEEE
Q 025108 156 KLSPGISYEVLFV 168 (257)
Q Consensus 156 ~LSP~t~Y~ay~v 168 (257)
.|.|+|.|.+.++
T Consensus 67 ~L~p~t~Y~~~V~ 79 (106)
T 2dju_A 67 GLSPFSEYAFRVL 79 (106)
T ss_dssp SCCTTCEEEEEEE
T ss_pred CCCCCcEEEEEEE
Confidence 5899999986544
No 16
>1gui_A Laminarinase 16A; carbohydrate binding module, CBM, glucan, cellulose; HET: BGC; 1.9A {Thermotoga maritima} SCOP: b.18.1.14
Probab=20.56 E-value=2.8e+02 Score=21.02 Aligned_cols=84 Identities=13% Similarity=0.330 Sum_probs=47.6
Q ss_pred cCCCCceEEEEEEEEEeCCCCCceeceEEEEEecCCee-eeeEEeeecCCCCCeEEEeeeeEEeCCCCC--eEEEEEEEE
Q 025108 156 KLSPGISYEVLFVIMLKDPAYGWEVPVSLRLLLPNGTK-QEHKENLIVKPRNQWIEIPVGEFKSTPENA--GEMEISMYE 232 (257)
Q Consensus 156 ~LSP~t~Y~ay~v~kl~~~~~Gwd~Pv~~~v~~~~g~~-~~~~~~l~~~~~dgW~EielGeF~~~~~~~--~eV~fsl~E 232 (257)
.|.+|.+|.+.|.++-... .++.+++.-..+.. ......+. ....|-.++. +|......+ ..+.|.+
T Consensus 68 ~l~~G~~Y~lsf~aka~~~-----~~i~v~l~~~~~~~~~~~~~~~~--lt~~w~~~~~-~ft~~~~t~~~~~l~f~~-- 137 (155)
T 1gui_A 68 GLYRGKTYTISFKAKADTP-----RPINVKILQNHDPWTNYFAQTVN--LTADWQTFTF-TYTHPDDADEVVQISFEL-- 137 (155)
T ss_dssp ECCTTCEEEEEEEEEESSC-----EEEEEEEECSSTTCCEEEEEEEE--ECSSCEEEEE-EEECCTTSCSEEEEEEEC--
T ss_pred EeCCCCEEEEEEEEEeCCC-----CcEEEEEEcCCCChHHheeccEe--eCCCCEEEEE-EEEcCCCCCceEEEEEEC--
Confidence 3789999999999887532 34444444321211 11011111 2347988875 676555323 3444433
Q ss_pred EeCCeee-eeEEEEEEEEEec
Q 025108 233 YEGGKWK-KGLVVKGVIIRPK 252 (257)
Q Consensus 233 ~~~~~wK-~GLiv~GieIRPk 252 (257)
|... +.+.|+-|.+.|.
T Consensus 138 ---g~~~~~~v~iD~VsL~P~ 155 (155)
T 1gui_A 138 ---GEGTATTIYFDDVTVSPQ 155 (155)
T ss_dssp ---CSSCCCEEEEEEEEEEEC
T ss_pred ---CCCCCceEEEEEEEEEeC
Confidence 2222 6799999999984
No 17
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=20.23 E-value=1.1e+02 Score=21.68 Aligned_cols=20 Identities=30% Similarity=0.340 Sum_probs=14.2
Q ss_pred EecCcCCCCceEEEEEEEEE
Q 025108 152 LDTTKLSPGISYEVLFVIML 171 (257)
Q Consensus 152 i~t~~LSP~t~Y~ay~v~kl 171 (257)
+....|.|+|.|.+.++-+-
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~ 83 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLT 83 (107)
T ss_dssp EEEESCCSSCEEEEEEEEEC
T ss_pred EEECCCCCCCEEEEEEEEEC
Confidence 44447999999997665544
Done!