BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025114
(257 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|76782196|gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]
Length = 302
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/242 (77%), Positives = 214/242 (88%), Gaps = 2/242 (0%)
Query: 14 SVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTV 73
S++VSC++ + ASVLESG +HAP D+A +LKNKSQEIEPYLSGRCIYLVGMMGSGKTTV
Sbjct: 62 SLEVSCSYKNFPASVLESGGIHAPFDDALILKNKSQEIEPYLSGRCIYLVGMMGSGKTTV 121
Query: 74 GKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVS 133
GK+LS VL Y+FFD DTL+EQ VD SVAEIF LYGEGFFR+KETEVL+KLSLM +LVVS
Sbjct: 122 GKVLSQVLSYAFFDSDTLVEQDVDANSVAEIFNLYGEGFFRDKETEVLRKLSLMHRLVVS 181
Query: 134 TGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNR 193
TGGGAV RPINW+YMQKGISVWLDVPLEALA+RIAAVGT SRPLLH +SGDAYT+ R
Sbjct: 182 TGGGAVVRPINWKYMQKGISVWLDVPLEALARRIAAVGTGSRPLLHH-DSGDAYTKTFMR 240
Query: 194 LSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEED-DM 252
L++L EER EAYANANARVSLE++A KLGH+DVS+LTP IAIEALEQIEGFLKEE+ D
Sbjct: 241 LTSLMEERSEAYANANARVSLEDVAAKLGHRDVSNLTPTAIAIEALEQIEGFLKEENGDF 300
Query: 253 AI 254
A+
Sbjct: 301 AL 302
>gi|356525535|ref|XP_003531380.1| PREDICTED: shikimate kinase, chloroplastic-like [Glycine max]
Length = 295
Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/241 (73%), Positives = 208/241 (86%), Gaps = 1/241 (0%)
Query: 9 QRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGS 68
+R +++VSC++ ++SAS+LESG+V AP+DE +LKN+SQEI+PYL+GRCIYLVGMMGS
Sbjct: 49 RRRTTALEVSCSYGNISASILESGSVRAPLDEELILKNRSQEIQPYLNGRCIYLVGMMGS 108
Query: 69 GKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMR 128
GKTTVGKI+S VLGYSF D D L+E+ V G SVA+IFK +GE FFR KETEVL KLSLM
Sbjct: 109 GKTTVGKIMSQVLGYSFCDSDALVEEEVGGNSVADIFKQHGETFFRNKETEVLHKLSLMH 168
Query: 129 QLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYT 188
QLV+STGGGAVTRPINW+YM KG+SVWLDVP+EALAQRIAAVGT+SRPLLH E+GD YT
Sbjct: 169 QLVISTGGGAVTRPINWKYMHKGVSVWLDVPVEALAQRIAAVGTNSRPLLHY-EAGDPYT 227
Query: 189 EALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKE 248
A RLS L+EERGEAYANANARVSL+NIA+KLG +DVS L+P IAIEALEQI+ FLK
Sbjct: 228 RAFMRLSALFEERGEAYANANARVSLKNIAIKLGKRDVSELSPTDIAIEALEQIDNFLKG 287
Query: 249 E 249
E
Sbjct: 288 E 288
>gi|222136867|gb|ACM45083.1| shikimate kinase [Vitis vinifera]
Length = 300
Score = 359 bits (921), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 174/255 (68%), Positives = 205/255 (80%), Gaps = 1/255 (0%)
Query: 1 MEPNVASKQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCI 60
+P S + + +++ S ++ + A +LESG+ +DEA +LKNKSQEI PY+ GRC+
Sbjct: 46 FQPRRTSNWQKHVALEASGSYRNFPAPILESGSFPPSLDEALILKNKSQEILPYIDGRCV 105
Query: 61 YLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEV 120
YLVGMMGSGKTT+GKILS VLGYSF D DTL+E +V GTSVAEIF LYGEGFFR KE+E
Sbjct: 106 YLVGMMGSGKTTIGKILSEVLGYSFCDSDTLVELAVKGTSVAEIFNLYGEGFFRNKESET 165
Query: 121 LQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
LQKLSL +VVSTGGGAV RPINW+YM KGISVWLDVPLEALA+RI+AVGT+SRPLLH
Sbjct: 166 LQKLSLTHHMVVSTGGGAVIRPINWKYMAKGISVWLDVPLEALARRISAVGTNSRPLLHH 225
Query: 181 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALE 240
+SGDAY L RLS LW+ERG+AYANANARVSLE IA KLGH+DV++LTP IAIEAL
Sbjct: 226 -DSGDAYNRTLTRLSNLWKERGDAYANANARVSLEEIAAKLGHRDVTNLTPTVIAIEALL 284
Query: 241 QIEGFLKEEDDMAIA 255
QIE FLK E+ M IA
Sbjct: 285 QIEAFLKGENGMDIA 299
>gi|225438559|ref|XP_002279932.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
gi|147772563|emb|CAN67344.1| hypothetical protein VITISV_038221 [Vitis vinifera]
gi|296082504|emb|CBI21509.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 359 bits (921), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 174/255 (68%), Positives = 205/255 (80%), Gaps = 1/255 (0%)
Query: 1 MEPNVASKQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCI 60
+P S + + +++ S ++ + A +LESG+ +DEA +LKNKSQEI PY+ GRC+
Sbjct: 46 FQPRRTSNWQKHVALEASGSYRNFPAPILESGSFPPSLDEALILKNKSQEILPYIDGRCV 105
Query: 61 YLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEV 120
YLVGMMGSGKTT+GKILS VLGYSF D DTL+E +V GTSVAEIF LYGEGFFR KE+E
Sbjct: 106 YLVGMMGSGKTTIGKILSEVLGYSFCDSDTLVELAVKGTSVAEIFNLYGEGFFRNKESET 165
Query: 121 LQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
LQKLSL +VVSTGGGAV RPINW+YM KGISVWLDVPLEALA+RI+AVGT+SRPLLH
Sbjct: 166 LQKLSLTHHMVVSTGGGAVIRPINWKYMAKGISVWLDVPLEALARRISAVGTNSRPLLHH 225
Query: 181 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALE 240
+SGDAY L RLS LW+ERG+AYANANARVSLE IA KLGH+DV++LTP IAIEAL
Sbjct: 226 -DSGDAYNRTLTRLSNLWKERGDAYANANARVSLEEIAAKLGHRDVTNLTPTVIAIEALL 284
Query: 241 QIEGFLKEEDDMAIA 255
QIE FLK E+ M IA
Sbjct: 285 QIEAFLKGENGMDIA 299
>gi|388514859|gb|AFK45491.1| unknown [Lotus japonicus]
Length = 299
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 171/244 (70%), Positives = 202/244 (82%), Gaps = 1/244 (0%)
Query: 7 SKQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMM 66
S+QR+ V ++N++ AS+LE+G+ P+DE +LK+KSQEIEPYL+GRCIYLVGMM
Sbjct: 55 SQQRTVPVVVACSSYNNIPASILETGSFRDPLDEEMILKSKSQEIEPYLNGRCIYLVGMM 114
Query: 67 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 126
GSGKTTVGKILS VL YSFFD D LIE+ VD TSVA+IFK YGE FFR KETE+L+KLS+
Sbjct: 115 GSGKTTVGKILSEVLSYSFFDSDALIEEEVDKTSVADIFKNYGEAFFRNKETEILKKLSM 174
Query: 127 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 186
MR+ V+STGGGAV +P NW+YM KGISVWLDVP+EALA+RI VGT+SRPLLH E+GDA
Sbjct: 175 MRRDVISTGGGAVVKPTNWKYMHKGISVWLDVPVEALARRITKVGTNSRPLLHY-EAGDA 233
Query: 187 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFL 246
YT+ RLS+L+EER EA+ANANARVSLENIA KL KD S L+P TIAIEALEQI GFL
Sbjct: 234 YTKTFMRLSSLFEERSEAHANANARVSLENIAAKLDQKDASHLSPKTIAIEALEQINGFL 293
Query: 247 KEED 250
K ED
Sbjct: 294 KGED 297
>gi|388510434|gb|AFK43283.1| unknown [Lotus japonicus]
Length = 299
Score = 352 bits (903), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 169/242 (69%), Positives = 202/242 (83%), Gaps = 1/242 (0%)
Query: 9 QRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGS 68
+R S++V+C++++L AS LESG+ AP+D+ +L+N+SQEI+PYL+GRCIYLVGMMGS
Sbjct: 53 RRRIASMEVACSYDNLPASTLESGSRRAPLDDELILENRSQEIQPYLNGRCIYLVGMMGS 112
Query: 69 GKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMR 128
GKTTVGKI+S VLGY F D D L+E+ V G SVA+IF LYGE FFR+KETE L KLS+M
Sbjct: 113 GKTTVGKIMSKVLGYEFCDSDALVEEEVGGNSVADIFNLYGESFFRDKETEALHKLSMMH 172
Query: 129 QLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYT 188
+ +VSTGGGAV RPINW+YM KGISVWLDVP+EALAQRIAAVGT+SRPLLH E+GDAYT
Sbjct: 173 RHIVSTGGGAVMRPINWKYMHKGISVWLDVPVEALAQRIAAVGTNSRPLLHY-EAGDAYT 231
Query: 189 EALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKE 248
AL RLS L+EERGEAYANA+ARVSLE IA K G +DV L+P IAIEALEQI+ FLK
Sbjct: 232 RALMRLSALFEERGEAYANASARVSLEKIATKRGQRDVLDLSPTAIAIEALEQIDAFLKG 291
Query: 249 ED 250
ED
Sbjct: 292 ED 293
>gi|145329216|ref|NP_001077937.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252149|gb|AEC07243.1| Shikimate kinase [Arabidopsis thaliana]
Length = 304
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 169/254 (66%), Positives = 207/254 (81%), Gaps = 3/254 (1%)
Query: 1 MEPNVASKQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCI 60
++P + QR S VSC+ N+ S ++LE+G+V+ P DE +LK K++E++PYL+GR +
Sbjct: 49 LQPERRNDQRRAVSPAVSCSDNNSSGALLETGSVY-PFDE-DILKRKAEEVKPYLNGRSM 106
Query: 61 YLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEV 120
YLVGMMGSGKTTVGK++S VLGY+FFDCDTLIEQ+++GTSVAEIF +GE FFR KET+
Sbjct: 107 YLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDA 166
Query: 121 LQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
L+KLS Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGTDSRPLLH
Sbjct: 167 LKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHD 226
Query: 181 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALE 240
ESGDAY+ A RLS +W+ERGEAY NANARVSLENIA K G+K+VS LTP IAIEA E
Sbjct: 227 -ESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFE 285
Query: 241 QIEGFLKEEDDMAI 254
Q+ FL++E+ M I
Sbjct: 286 QVLSFLEKEETMEI 299
>gi|189303601|gb|ACD85800.1| At2g21940 [Arabidopsis thaliana]
Length = 303
Score = 343 bits (879), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 170/254 (66%), Positives = 208/254 (81%), Gaps = 4/254 (1%)
Query: 1 MEPNVASKQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCI 60
++P + QR S VSC+ N+ S+++LE+G+V+ P DE +LK K++E++PYL+GR +
Sbjct: 49 LQPERRNDQRRAVSPAVSCSDNN-SSALLETGSVY-PFDE-DILKRKAEEVKPYLNGRSM 105
Query: 61 YLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEV 120
YLVGMMGSGKTTVGK++S VLGY+FFDCDTLIEQ+++GTSVAEIF +GE FFR KET+
Sbjct: 106 YLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDA 165
Query: 121 LQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
L+KLS Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGTDSRPLLH
Sbjct: 166 LKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHD 225
Query: 181 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALE 240
ESGDAY+ A RLS +W+ERGEAY NANARVSLENIA K G+KDVS LTP IAIEA E
Sbjct: 226 -ESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKDVSDLTPTEIAIEAFE 284
Query: 241 QIEGFLKEEDDMAI 254
Q+ FL++E+ M I
Sbjct: 285 QVLSFLEKEETMEI 298
>gi|30681570|ref|NP_179785.2| Shikimate kinase [Arabidopsis thaliana]
gi|145329577|ref|NP_001077938.1| Shikimate kinase [Arabidopsis thaliana]
gi|145362131|ref|NP_973507.2| Shikimate kinase [Arabidopsis thaliana]
gi|209572588|sp|Q9SJ05.2|SK1_ARATH RecName: Full=Shikimate kinase 1, chloroplastic; Short=AtSK1;
Flags: Precursor
gi|330252146|gb|AEC07240.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252147|gb|AEC07241.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252150|gb|AEC07244.1| Shikimate kinase [Arabidopsis thaliana]
Length = 303
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/254 (66%), Positives = 208/254 (81%), Gaps = 4/254 (1%)
Query: 1 MEPNVASKQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCI 60
++P + QR S VSC+ N+ S+++LE+G+V+ P DE +LK K++E++PYL+GR +
Sbjct: 49 LQPERRNDQRRAVSPAVSCSDNN-SSALLETGSVY-PFDE-DILKRKAEEVKPYLNGRSM 105
Query: 61 YLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEV 120
YLVGMMGSGKTTVGK++S VLGY+FFDCDTLIEQ+++GTSVAEIF +GE FFR KET+
Sbjct: 106 YLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDA 165
Query: 121 LQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
L+KLS Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGTDSRPLLH
Sbjct: 166 LKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHD 225
Query: 181 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALE 240
ESGDAY+ A RLS +W+ERGEAY NANARVSLENIA K G+K+VS LTP IAIEA E
Sbjct: 226 -ESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFE 284
Query: 241 QIEGFLKEEDDMAI 254
Q+ FL++E+ M I
Sbjct: 285 QVLSFLEKEETMEI 298
>gi|380505030|gb|AFD62803.1| shikimate kinase, partial [Ipomoea purpurea]
Length = 298
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/232 (71%), Positives = 195/232 (84%), Gaps = 1/232 (0%)
Query: 18 SCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKIL 77
SC+ + AS++ES N +DE QVLK+KS+EIEP LSGRCIYLVGMMGSGKTTVG+I+
Sbjct: 66 SCSSQNSQASIMESENSLPSLDEIQVLKSKSEEIEPCLSGRCIYLVGMMGSGKTTVGRII 125
Query: 78 SGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGG 137
+ LGY+FFDCDTLIEQ+V GTSVAEIFKL+GEGFFR+ ETEVL+KLSLMR++VVSTGGG
Sbjct: 126 AEALGYAFFDCDTLIEQAVGGTSVAEIFKLHGEGFFRDNETEVLRKLSLMREVVVSTGGG 185
Query: 138 AVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTL 197
AV RPINWRYM KGISVWLDVP++ALA+RI+AVGT SRPLLH ESGD Y + L RLSTL
Sbjct: 186 AVVRPINWRYMHKGISVWLDVPVDALARRISAVGTHSRPLLHN-ESGDIYAKTLKRLSTL 244
Query: 198 WEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
+ERG+AYAN+ ARV LENIA K G DV ++TP IAIEAL QI FLK+E
Sbjct: 245 LDERGDAYANSKARVCLENIAAKSGCIDVCTITPTEIAIEALVQIGNFLKKE 296
>gi|356507492|ref|XP_003522498.1| PREDICTED: LOW QUALITY PROTEIN: shikimate kinase,
chloroplastic-like [Glycine max]
Length = 311
Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 167/235 (71%), Positives = 194/235 (82%), Gaps = 5/235 (2%)
Query: 20 TFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLV----GMMGSGKTTVGK 75
F S+SAS L+SG+ HAP+DE +LK+KSQEIEPYL+GRCIYLV GMMGSGKTTVGK
Sbjct: 76 NFFSMSASTLQSGSFHAPVDEMLILKSKSQEIEPYLNGRCIYLVDQSLGMMGSGKTTVGK 135
Query: 76 ILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTG 135
ILS VL Y FFD D L+E+ VDGT+VA+IFK GE FFR KETEVL+KLS+M + V+STG
Sbjct: 136 ILSQVLSYLFFDSDALVEEEVDGTAVADIFKHNGEPFFRNKETEVLRKLSMMHRYVISTG 195
Query: 136 GGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLS 195
GGAV RPINW+YMQ+GISVWLDVP+EALAQRI AVGTDSRPLLH E GDAYT+ RLS
Sbjct: 196 GGAVVRPINWKYMQQGISVWLDVPVEALAQRITAVGTDSRPLLHY-EEGDAYTKTFMRLS 254
Query: 196 TLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEED 250
L++ER EAYANAN +VSLEN+A KLG +D S L+P IA+EALEQI+GFL ED
Sbjct: 255 ALFKERSEAYANANVKVSLENMAAKLGSRDESDLSPTAIAMEALEQIKGFLMGED 309
>gi|449461431|ref|XP_004148445.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
gi|449503057|ref|XP_004161818.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 302
Score = 340 bits (871), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 168/244 (68%), Positives = 201/244 (82%), Gaps = 4/244 (1%)
Query: 7 SKQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMM 66
S R ++K+SC++N+ +SVLESGN A +DE ++ KS+EIE YL+GRCIYLVGMM
Sbjct: 58 SNHRRTVALKISCSYNN--SSVLESGNHCASVDETLAIQRKSREIESYLNGRCIYLVGMM 115
Query: 67 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 126
GSGKTTVGK+LS LGYSF D D+L+EQ + G SVAE+FK+YGE FFRE+ETE L+KLSL
Sbjct: 116 GSGKTTVGKVLSNALGYSFSDSDSLVEQDM-GISVAEVFKVYGEDFFRERETEALRKLSL 174
Query: 127 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 186
MRQ V+STGGGAVTR INW+YM KGISVWLDVPLEAL +RI+AVGT+SRPLLH +S DA
Sbjct: 175 MRQFVISTGGGAVTRSINWKYMHKGISVWLDVPLEALVKRISAVGTNSRPLLHH-DSNDA 233
Query: 187 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFL 246
Y++ L RLSTL EERGEAYANA +VS E IA KLG KDVS++TP+ IAIEALE+IE FL
Sbjct: 234 YSKTLVRLSTLLEERGEAYANAEVKVSCEKIAAKLGTKDVSNVTPMAIAIEALEEIETFL 293
Query: 247 KEED 250
K ED
Sbjct: 294 KRED 297
>gi|30692396|ref|NP_195664.2| shikimate kinase 2 [Arabidopsis thaliana]
gi|42573237|ref|NP_974715.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|75151384|sp|Q8GY88.1|SK2_ARATH RecName: Full=Shikimate kinase 2, chloroplastic; Short=AtSK2;
Flags: Precursor
gi|26450651|dbj|BAC42436.1| putative shikimate kinase [Arabidopsis thaliana]
gi|28950863|gb|AAO63355.1| At4g39540 [Arabidopsis thaliana]
gi|332661683|gb|AEE87083.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|332661684|gb|AEE87084.1| shikimate kinase 2 [Arabidopsis thaliana]
Length = 300
Score = 339 bits (870), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 162/232 (69%), Positives = 198/232 (85%), Gaps = 3/232 (1%)
Query: 25 SASVLESGNV-HAPIDE-AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLG 82
S+++LE+G++ H+P DE Q+LK K++E++PYL+GR +YLVGMMGSGKTTVGKI++ LG
Sbjct: 64 SSALLETGSLLHSPFDEEQQILKKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARSLG 123
Query: 83 YSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLM-RQLVVSTGGGAVTR 141
Y+FFDCDTLIEQ++ GTSVAEIF+ +GE FREKETE L+KLSLM Q+VVSTGGGAV R
Sbjct: 124 YTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVIR 183
Query: 142 PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEER 201
PINW+YM KGIS+WLDVPLEALA RIAAVGT SRPLLH ESGD YT ALNRLST+W+ R
Sbjct: 184 PINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWDAR 243
Query: 202 GEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEEDDMA 253
GEAY A+ARVSLENI +KLG++ VS LTP IAIEA EQ++ +L++ED MA
Sbjct: 244 GEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEKEDGMA 295
>gi|340707718|pdb|3NWJ|A Chain A, Crystal Structure Of Shikimate Kinase From Arabidopsis
Thaliana (Atsk2)
gi|340707719|pdb|3NWJ|B Chain B, Crystal Structure Of Shikimate Kinase From Arabidopsis
Thaliana (Atsk2)
Length = 250
Score = 339 bits (870), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 162/232 (69%), Positives = 198/232 (85%), Gaps = 3/232 (1%)
Query: 25 SASVLESGNV-HAPIDE-AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLG 82
S+++LE+G++ H+P DE Q+LK K++E++PYL+GR +YLVGMMGSGKTTVGKI++ LG
Sbjct: 14 SSALLETGSLLHSPFDEEQQILKKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARSLG 73
Query: 83 YSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLM-RQLVVSTGGGAVTR 141
Y+FFDCDTLIEQ++ GTSVAEIF+ +GE FREKETE L+KLSLM Q+VVSTGGGAV R
Sbjct: 74 YTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVIR 133
Query: 142 PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEER 201
PINW+YM KGIS+WLDVPLEALA RIAAVGT SRPLLH ESGD YT ALNRLST+W+ R
Sbjct: 134 PINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWDAR 193
Query: 202 GEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEEDDMA 253
GEAY A+ARVSLENI +KLG++ VS LTP IAIEA EQ++ +L++ED MA
Sbjct: 194 GEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEKEDGMA 245
>gi|39104605|dbj|BAC43483.2| putative shikimate kinase precursor [Arabidopsis thaliana]
Length = 303
Score = 339 bits (869), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 168/254 (66%), Positives = 208/254 (81%), Gaps = 4/254 (1%)
Query: 1 MEPNVASKQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCI 60
++P + QR S VSC+ N+ S+++LE+G+V+ P DE +LK K++E++PYL+GR +
Sbjct: 49 LQPERRNDQRRAVSPAVSCSDNN-SSALLETGSVY-PFDE-DILKRKAEEVKPYLNGRSM 105
Query: 61 YLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEV 120
YLVGMMGSGKTTVGK++S VLGY+FFDCDTLIEQ+++GTSVAEIF +GE FFR KET+
Sbjct: 106 YLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDA 165
Query: 121 LQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
L+KLS Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGTDSRPLLH
Sbjct: 166 LKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHD 225
Query: 181 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALE 240
ESG+AY+ A RLS +W+ERGEAY NANARVSLENIA K G+K+VS LTP IAIEA E
Sbjct: 226 -ESGNAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFE 284
Query: 241 QIEGFLKEEDDMAI 254
Q+ FL++E+ M I
Sbjct: 285 QVLSFLEKEETMEI 298
>gi|316995679|emb|CBY85385.1| shikimate kinase [Cucumis sativus]
Length = 302
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 168/244 (68%), Positives = 200/244 (81%), Gaps = 4/244 (1%)
Query: 7 SKQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMM 66
S R ++K+SC++N+ +SVLESGN A +DE ++ KS+EIE YL+GRCIYLVGMM
Sbjct: 58 SNHRRTVALKISCSYNN--SSVLESGNHCASVDETLAIQRKSREIESYLNGRCIYLVGMM 115
Query: 67 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 126
GSGKTTVGK+LS LGYSF D D+L+EQ + G SVAE+FK+YGE FFRE+ETE L KLSL
Sbjct: 116 GSGKTTVGKVLSNALGYSFSDSDSLVEQDM-GISVAEVFKVYGEDFFRERETEALGKLSL 174
Query: 127 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 186
MRQ V+STGGGAVTR INW+YM KGISVWLDVPLEAL +RI+AVGT+SRPLLH +S DA
Sbjct: 175 MRQFVISTGGGAVTRSINWKYMHKGISVWLDVPLEALVKRISAVGTNSRPLLHH-DSNDA 233
Query: 187 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFL 246
Y++ L RLSTL EERGEAYANA +VS E IA KLG KDVS++TP+ IAIEALE+IE FL
Sbjct: 234 YSKTLVRLSTLLEERGEAYANAEVKVSCEKIAAKLGTKDVSNVTPMAIAIEALEEIETFL 293
Query: 247 KEED 250
K ED
Sbjct: 294 KRED 297
>gi|297821397|ref|XP_002878581.1| hypothetical protein ARALYDRAFT_320039 [Arabidopsis lyrata subsp.
lyrata]
gi|297324420|gb|EFH54840.1| hypothetical protein ARALYDRAFT_320039 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/251 (67%), Positives = 208/251 (82%), Gaps = 8/251 (3%)
Query: 8 KQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLK----NKSQEIEPYLSGRCIYLV 63
++RS S +V C+ N+ S+++LE+G+V+ P DE +LK K++E++P+L+GR +YLV
Sbjct: 54 RKRSVSS-EVLCSDNN-SSALLEAGSVY-PFDEDLILKATLQRKAEEVKPFLNGRSMYLV 110
Query: 64 GMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK 123
GMMGSGKTTVGK++S VLGYSFFDCD+LIEQ+++GTSVAEIF +GE FFR KET+ L+K
Sbjct: 111 GMMGSGKTTVGKLMSKVLGYSFFDCDSLIEQAMNGTSVAEIFVHHGENFFRGKETDALKK 170
Query: 124 LSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 183
LS M Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGT SRPLLH ES
Sbjct: 171 LSSMYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHD-ES 229
Query: 184 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 243
GDAY+ A RLST+W+ERGEAYANANARVSLENIA K G+KDVS LTP IAIEA EQ+
Sbjct: 230 GDAYSVAFKRLSTIWDERGEAYANANARVSLENIAAKRGYKDVSDLTPTEIAIEAFEQVL 289
Query: 244 GFLKEEDDMAI 254
FL++E+ M I
Sbjct: 290 SFLEKEETMEI 300
>gi|297797940|ref|XP_002866854.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297312690|gb|EFH43113.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 299
Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 161/249 (64%), Positives = 205/249 (82%), Gaps = 6/249 (2%)
Query: 8 KQRSYDSVKVSCTFNSLSASVLESGNV-HAPIDE-AQVLKNKSQEIEPYLSGRCIYLVGM 65
K+R + VS + S+++L++G++ H+P DE Q+L+ K++E++PYL+GR +YLVGM
Sbjct: 49 KRRDHRQRSVS---DKNSSALLDTGSLLHSPFDEEQQLLQKKAEEVKPYLNGRSMYLVGM 105
Query: 66 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 125
MGSGKTTVGKI++ LGY+FFDCDTLIEQ+++GTSVAEIF+ +GE FREKETE L+KLS
Sbjct: 106 MGSGKTTVGKIMARALGYTFFDCDTLIEQAMNGTSVAEIFEHFGESVFREKETEALKKLS 165
Query: 126 LM-RQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 184
LM Q+VVSTGGGAV RPINW+YM KGIS+WLDVPL+ALA RIAAVGT SRPLLH ESG
Sbjct: 166 LMYNQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLKALAHRIAAVGTGSRPLLHDDESG 225
Query: 185 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 244
D YT ALNRLST+W+ RGEAY NA+ARVSLE++ +KLG++ VS LTP IA+EA EQ+
Sbjct: 226 DTYTAALNRLSTIWDARGEAYTNASARVSLESMTLKLGYRSVSDLTPTEIAMEAFEQVRS 285
Query: 245 FLKEEDDMA 253
+L +ED MA
Sbjct: 286 YLDKEDGMA 294
>gi|334187330|ref|NP_001190969.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|332661685|gb|AEE87085.1| shikimate kinase 2 [Arabidopsis thaliana]
Length = 308
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 161/240 (67%), Positives = 198/240 (82%), Gaps = 11/240 (4%)
Query: 25 SASVLESGNV-HAPIDE-AQVLKNKSQEIEPYLSGRCIYLV--------GMMGSGKTTVG 74
S+++LE+G++ H+P DE Q+LK K++E++PYL+GR +YL+ GMMGSGKTTVG
Sbjct: 64 SSALLETGSLLHSPFDEEQQILKKKAEEVKPYLNGRSMYLLNSFLVNALGMMGSGKTTVG 123
Query: 75 KILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLM-RQLVVS 133
KI++ LGY+FFDCDTLIEQ++ GTSVAEIF+ +GE FREKETE L+KLSLM Q+VVS
Sbjct: 124 KIMARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVS 183
Query: 134 TGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNR 193
TGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGT SRPLLH ESGD YT ALNR
Sbjct: 184 TGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAALNR 243
Query: 194 LSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEEDDMA 253
LST+W+ RGEAY A+ARVSLENI +KLG++ VS LTP IAIEA EQ++ +L++ED MA
Sbjct: 244 LSTIWDARGEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEKEDGMA 303
>gi|356509036|ref|XP_003523258.1| PREDICTED: shikimate kinase, chloroplastic-like [Glycine max]
Length = 299
Score = 330 bits (846), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 159/245 (64%), Positives = 194/245 (79%), Gaps = 1/245 (0%)
Query: 6 ASKQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGM 65
A+ +R S+ V+C+ N++ AS LE G+ H+ ++E +LK KSQEIEPYLSGRCIYLVGM
Sbjct: 54 ANIRRRTASLVVACSHNNIPASALEYGSFHSSVEEKLILKIKSQEIEPYLSGRCIYLVGM 113
Query: 66 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 125
M SGKTTVG+ILS L YSF+D D L+ + V G SV +IFK YGE FFR KETEVLQK+S
Sbjct: 114 MASGKTTVGRILSEALSYSFYDSDALVVKEVGGISVTDIFKHYGEPFFRNKETEVLQKVS 173
Query: 126 LMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 185
+M + ++STGGGAV RPINW+YMQ+GISVWLDVP+E L QRI A GTDSRPLLH E GD
Sbjct: 174 IMHRHLISTGGGAVVRPINWKYMQQGISVWLDVPVEVLTQRITAEGTDSRPLLH-YEGGD 232
Query: 186 AYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGF 245
AYT+ + LS+L+EER EAYANAN +VSLEN+A KLG +DV L+P IA+EALEQI+GF
Sbjct: 233 AYTKTITHLSSLFEERSEAYANANVKVSLENMAAKLGRRDVLDLSPTAIAMEALEQIKGF 292
Query: 246 LKEED 250
L ED
Sbjct: 293 LIGED 297
>gi|255646624|gb|ACU23786.1| unknown [Glycine max]
Length = 299
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/245 (64%), Positives = 194/245 (79%), Gaps = 1/245 (0%)
Query: 6 ASKQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGM 65
A+ +R S+ V+C+ N++ AS LE G+ H+ ++E +LK KSQEIEPYLSGRCIYLVGM
Sbjct: 54 ANIRRRTASLVVACSHNNIPASALEYGSFHSSVEEKLILKIKSQEIEPYLSGRCIYLVGM 113
Query: 66 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 125
M SGKTTVG+ILS L YSF+D D L+ + V G SV +IFK YGE FFR KETEVLQK+S
Sbjct: 114 MASGKTTVGRILSEALSYSFYDSDALVVKEVGGISVTDIFKHYGEPFFRNKETEVLQKVS 173
Query: 126 LMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 185
+M + ++STGGGAV RPI+W+YMQ+GISVWLDVP+E L QRI A GTDSRPLLH E GD
Sbjct: 174 IMHRHLISTGGGAVVRPIDWKYMQQGISVWLDVPVEVLTQRITAEGTDSRPLLH-YEGGD 232
Query: 186 AYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGF 245
AYT+ + LS+L+EER EAYANAN +VSLEN+A KLG +DV L+P IA+EALEQI+GF
Sbjct: 233 AYTKTITHLSSLFEERSEAYANANVKVSLENMAAKLGRRDVLDLSPTAIAMEALEQIKGF 292
Query: 246 LKEED 250
L ED
Sbjct: 293 LIGED 297
>gi|449521902|ref|XP_004167968.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 300
Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/240 (67%), Positives = 196/240 (81%), Gaps = 2/240 (0%)
Query: 14 SVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTV 73
SV+ SC ++S LE+ H P D+ +LKNKSQE++P+L+GRCIYLVGMMGSGKTT+
Sbjct: 61 SVETSCYRENISGLTLETEKSH-PFDKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTI 119
Query: 74 GKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVS 133
GKIL+ LGY+F D DTL+EQ V GTSVA+IFKL+GE FFR+KETEVL+KLSLM V+S
Sbjct: 120 GKILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVIS 179
Query: 134 TGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNR 193
TGGG V RPINW+YM+ GIS+WLDVPLEALA+RIAAVGTDSRPLLH ESG+AYT+A R
Sbjct: 180 TGGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHH-ESGNAYTKAFRR 238
Query: 194 LSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEEDDMA 253
LS L EERG+AYANANA+V L ++A KLG DV +LTP IA+EAL QI+ FL++E+D A
Sbjct: 239 LSVLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQENDYA 298
>gi|350538979|ref|NP_001234112.1| shikimate kinase, chloroplastic [Solanum lycopersicum]
gi|114200|sp|Q00497.1|AROK_SOLLC RecName: Full=Shikimate kinase, chloroplastic; Flags: Precursor
gi|19349|emb|CAA45121.1| shikimate kinase precursor [Solanum lycopersicum]
Length = 300
Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 163/254 (64%), Positives = 193/254 (75%), Gaps = 2/254 (0%)
Query: 1 MEPNVASKQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCI 60
++P A+ +KVSC+ ++ ASVLESG A IDE + LKNK++E+E YL GRC+
Sbjct: 48 LQPRKAAHSDRRVQLKVSCSPQNVQASVLESGCFSASIDEIETLKNKAEEVEEYLDGRCV 107
Query: 61 YLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEV 120
YLVGMMG GKTTVG+IL+ LGYSFFDCD LIEQ+V G +VAEIF+L GE FFR+ ETEV
Sbjct: 108 YLVGMMGCGKTTVGRILAETLGYSFFDCDRLIEQAVGGITVAEIFELRGESFFRDNETEV 167
Query: 121 LQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
L KLSLM +LVVSTGGGAV RPINWR+M KGISVWLDVPLEALA+RI GT SRPLLH+
Sbjct: 168 LHKLSLMHRLVVSTGGGAVVRPINWRHMHKGISVWLDVPLEALAKRITTEGTKSRPLLHE 227
Query: 181 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALE 240
ESGD Y L RL+TL E RGE YANA+ARVSLENIA+K KDV +TP I +E L
Sbjct: 228 -ESGDVYDTTLKRLTTLMETRGENYANASARVSLENIALK-REKDVCHITPAEITLEVLI 285
Query: 241 QIEGFLKEEDDMAI 254
QIE FLK + + +
Sbjct: 286 QIENFLKTQKSVVV 299
>gi|4417286|gb|AAD20411.1| putative shikimate kinase precursor [Arabidopsis thaliana]
Length = 292
Score = 326 bits (835), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 162/246 (65%), Positives = 199/246 (80%), Gaps = 4/246 (1%)
Query: 1 MEPNVASKQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCI 60
++P + QR S VSC+ N+ S+++LE+G+V+ P DE +LK K++E++PYL+GR +
Sbjct: 49 LQPERRNDQRRAVSPAVSCSDNN-SSALLETGSVY-PFDE-DILKRKAEEVKPYLNGRSM 105
Query: 61 YLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEV 120
YLVGMMGSGKTTVGK++S VLGY+FFDCDTLIEQ+++GTSVAEIF +GE FFR KET+
Sbjct: 106 YLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDA 165
Query: 121 LQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
L+KLS Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGTDSRPLLH
Sbjct: 166 LKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHD 225
Query: 181 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALE 240
ESGDAY+ A RLS +W+ERGEAY NANARVSLENIA K G+K+VS LTP IAIE +
Sbjct: 226 -ESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEVSQ 284
Query: 241 QIEGFL 246
+ L
Sbjct: 285 VLSQLL 290
>gi|449448562|ref|XP_004142035.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 229
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/225 (68%), Positives = 188/225 (83%), Gaps = 2/225 (0%)
Query: 29 LESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDC 88
LE+ H P D+ +LKNKSQE++P+L+G+CIYLVGMMGSGKTT+GKIL+ LGY+F D
Sbjct: 5 LETEKSH-PFDKDLLLKNKSQEVQPHLNGQCIYLVGMMGSGKTTIGKILAKELGYTFSDS 63
Query: 89 DTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM 148
DTL+EQ V GTSVA+IFKL+GE FFR+KETEVL+KLSLM V+STGGG V RPINW+YM
Sbjct: 64 DTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVISTGGGIVVRPINWKYM 123
Query: 149 QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
+ GIS+WLDVPLEALA+RIAAVGTDSRPLLH ESG+AYT+A RLS L EERG+AYANA
Sbjct: 124 RNGISIWLDVPLEALAKRIAAVGTDSRPLLHH-ESGNAYTKAFRRLSVLLEERGDAYANA 182
Query: 209 NARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEEDDMA 253
NA+V L ++A KLG DV +LTP IA+EAL QI+ FL++E+D A
Sbjct: 183 NAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQENDYA 227
>gi|224096310|ref|XP_002310602.1| shikimate kinase [Populus trichocarpa]
gi|222853505|gb|EEE91052.1| shikimate kinase [Populus trichocarpa]
Length = 294
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/234 (69%), Positives = 185/234 (79%), Gaps = 2/234 (0%)
Query: 14 SVKVSCTFNSLSASVLESGNVHAPI-DEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTT 72
S +VSC+ N+ S LES ++ +EA +LKNKSQEIEPYL+GRCIYLVGMMGSGKTT
Sbjct: 62 SFEVSCSCNNSQVSTLESESLQDLFGEEALILKNKSQEIEPYLNGRCIYLVGMMGSGKTT 121
Query: 73 VGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVV 132
VGKILS + YSF DCD L+EQ V SVAEIF++YGE FFR+KETE L+KLS+ + VV
Sbjct: 122 VGKILSRSIRYSFCDCDKLVEQDVGVPSVAEIFEIYGEDFFRDKETEALEKLSIEHRFVV 181
Query: 133 STGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALN 192
STGGGAV R NW YM+KGISVWLDVPLE LAQRIAAVGT SRPLL ESGDAY A
Sbjct: 182 STGGGAVIRDENWIYMRKGISVWLDVPLEELAQRIAAVGTKSRPLLDN-ESGDAYNTAFR 240
Query: 193 RLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFL 246
RLSTL+E+R +AY NA ARVSLENIA KLG+KDVSS+TP IAIEALEQI L
Sbjct: 241 RLSTLFEKRHKAYENAKARVSLENIAAKLGYKDVSSITPAMIAIEALEQIGNVL 294
>gi|242077364|ref|XP_002448618.1| hypothetical protein SORBIDRAFT_06g030260 [Sorghum bicolor]
gi|241939801|gb|EES12946.1| hypothetical protein SORBIDRAFT_06g030260 [Sorghum bicolor]
Length = 300
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/235 (63%), Positives = 190/235 (80%), Gaps = 6/235 (2%)
Query: 15 VKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVG 74
++VSC SA +G VH DEA +L+ K+Q++ PYL GRC+YLVGMMGSGKTTVG
Sbjct: 67 LRVSC-----SAKSAGTGKVHYSTDEALILQQKAQDVLPYLDGRCVYLVGMMGSGKTTVG 121
Query: 75 KILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVST 134
KIL+ VLGYSFFD D L+E++V +SVAEIF+L+ E FFR+ E+EVL+ LS M +LVV+T
Sbjct: 122 KILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFRDNESEVLRDLSSMHRLVVAT 181
Query: 135 GGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRL 194
GGGAV RPINW YM+KG++VWLDVPL+ALA+RIAAVGT SRPLLHQ ESGD Y +A +L
Sbjct: 182 GGGAVIRPINWSYMKKGLTVWLDVPLDALARRIAAVGTASRPLLHQ-ESGDPYAKAYAKL 240
Query: 195 STLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
++L+E+R ++YANA+ARVSLE+IA+K GH DV+ LTP IAIEAL ++E FL E+
Sbjct: 241 TSLFEQRMDSYANADARVSLEHIALKQGHNDVTILTPSAIAIEALLKMESFLTEK 295
>gi|195638244|gb|ACG38590.1| shikimate kinase [Zea mays]
Length = 293
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/244 (61%), Positives = 191/244 (78%), Gaps = 6/244 (2%)
Query: 6 ASKQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGM 65
A +R+ D + C S +G VH D+A +L+ K+Q++ PYL GRC+YLVGM
Sbjct: 51 ADTRRAADYPALRCAAQSAG-----TGKVHYSADDALILQQKAQDVLPYLDGRCVYLVGM 105
Query: 66 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 125
MGSGKTTVGKILS VLGYSFFD D L+E++V +SVAEIF+L+ E FFR+ E+EVL LS
Sbjct: 106 MGSGKTTVGKILSEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSETFFRDNESEVLTDLS 165
Query: 126 LMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 185
M +LVV+TGGGAV RPINW YM+KG++VWLDVPL+ALA+RIAAVGT SRPLLHQ ESGD
Sbjct: 166 SMHRLVVATGGGAVIRPINWSYMKKGLTVWLDVPLDALARRIAAVGTASRPLLHQ-ESGD 224
Query: 186 AYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGF 245
Y +A +L++L+E+R ++YANA+ARVSLE+IA+K GH DV+ LTP TIAIEAL ++E F
Sbjct: 225 PYAKAYAKLTSLFEQRMDSYANADARVSLEHIALKQGHNDVTILTPSTIAIEALLKMESF 284
Query: 246 LKEE 249
L E+
Sbjct: 285 LTEK 288
>gi|414585207|tpg|DAA35778.1| TPA: shikimate kinase [Zea mays]
Length = 292
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/219 (66%), Positives = 183/219 (83%), Gaps = 1/219 (0%)
Query: 31 SGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDT 90
+G VH D+A +L+ K+Q++ PYL GRC+YLVGMMGSGKTTVGKILS VLGYSFFD D
Sbjct: 70 TGKVHYSADDALILQQKAQDVLPYLDGRCVYLVGMMGSGKTTVGKILSEVLGYSFFDSDK 129
Query: 91 LIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK 150
L+E++V +SVAEIF+L+ E FFR+ E+EVL LS M +LVV+TGGGAV RPINW YM+K
Sbjct: 130 LVEKAVGISSVAEIFQLHSETFFRDNESEVLTDLSSMHRLVVATGGGAVIRPINWSYMKK 189
Query: 151 GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANA 210
G++VWLDVPL+ALA+RIAAVGT SRPLLHQ ESGD Y +A +L++L+E+R ++YANA+A
Sbjct: 190 GLTVWLDVPLDALARRIAAVGTASRPLLHQ-ESGDPYAKAYAKLTSLFEQRMDSYANADA 248
Query: 211 RVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
RVSLE+IA+K GH DV+ LTP TIAIEAL ++E FL E+
Sbjct: 249 RVSLEHIALKQGHNDVTILTPSTIAIEALLKMESFLTEK 287
>gi|212275149|ref|NP_001130232.1| hypothetical protein [Zea mays]
gi|194688616|gb|ACF78392.1| unknown [Zea mays]
gi|223973151|gb|ACN30763.1| unknown [Zea mays]
gi|414585206|tpg|DAA35777.1| TPA: hypothetical protein ZEAMMB73_776202 [Zea mays]
Length = 293
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/219 (66%), Positives = 183/219 (83%), Gaps = 1/219 (0%)
Query: 31 SGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDT 90
+G VH D+A +L+ K+Q++ PYL GRC+YLVGMMGSGKTTVGKILS VLGYSFFD D
Sbjct: 71 TGKVHYSADDALILQQKAQDVLPYLDGRCVYLVGMMGSGKTTVGKILSEVLGYSFFDSDK 130
Query: 91 LIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK 150
L+E++V +SVAEIF+L+ E FFR+ E+EVL LS M +LVV+TGGGAV RPINW YM+K
Sbjct: 131 LVEKAVGISSVAEIFQLHSETFFRDNESEVLTDLSSMHRLVVATGGGAVIRPINWSYMKK 190
Query: 151 GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANA 210
G++VWLDVPL+ALA+RIAAVGT SRPLLHQ ESGD Y +A +L++L+E+R ++YANA+A
Sbjct: 191 GLTVWLDVPLDALARRIAAVGTASRPLLHQ-ESGDPYAKAYAKLTSLFEQRMDSYANADA 249
Query: 211 RVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
RVSLE+IA+K GH DV+ LTP TIAIEAL ++E FL E+
Sbjct: 250 RVSLEHIALKQGHNDVTILTPSTIAIEALLKMESFLTEK 288
>gi|224083807|ref|XP_002307130.1| shikimate kinase [Populus trichocarpa]
gi|222856579|gb|EEE94126.1| shikimate kinase [Populus trichocarpa]
Length = 286
Score = 302 bits (774), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 155/225 (68%), Positives = 183/225 (81%), Gaps = 2/225 (0%)
Query: 14 SVKVSCTFNSLSASVLESGNVHAPID-EAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTT 72
S +VS ++N+ S LES ++ +D EA +LKNKSQEIEPYL+GRCIYLVGMMGSGKTT
Sbjct: 62 SFEVSRSYNNSRVSTLESESLQDLLDDEALILKNKSQEIEPYLNGRCIYLVGMMGSGKTT 121
Query: 73 VGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVV 132
VGKILS + YSF D DTL+E+ V TSVAEIF++YGE FFR+KETE L+KLSL + VV
Sbjct: 122 VGKILSQAIHYSFCDSDTLVEKDVGVTSVAEIFQIYGEDFFRDKETEALEKLSLEHRYVV 181
Query: 133 STGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALN 192
STGGGAV + NW YM+KGISVWLDVPLE LAQRIAAVGT +RPLL + E GDAYT+A
Sbjct: 182 STGGGAVIQDENWTYMRKGISVWLDVPLEELAQRIAAVGTKTRPLLDR-EPGDAYTKAFR 240
Query: 193 RLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIE 237
RLS L+E+R +AY NANARVSLENIA KLG+KDVS++TP IAIE
Sbjct: 241 RLSALFEQRYKAYENANARVSLENIAAKLGYKDVSNITPPMIAIE 285
>gi|357138119|ref|XP_003570645.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 305
Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/217 (66%), Positives = 179/217 (82%), Gaps = 1/217 (0%)
Query: 33 NVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLI 92
N+H +DEA +LK KS+++ +L+GRCIYLVGMMGSGK+TVGKIL+ VLGYSFFD D L+
Sbjct: 73 NLHNSVDEALLLKRKSEDVLFHLNGRCIYLVGMMGSGKSTVGKILAEVLGYSFFDSDKLV 132
Query: 93 EQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGI 152
EQSV SVA+IFK++ E FFR+ ET VL+ LS MR+LVV+TGGGAV RP+NW+ M+KG+
Sbjct: 133 EQSVGMPSVAQIFKVHSEAFFRDNETSVLRDLSSMRRLVVATGGGAVIRPVNWKNMKKGL 192
Query: 153 SVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
SVWLDVPLEALA+RIA VGT SRPLL Q SGD YT A ++LSTL E+RG+AYANA+ RV
Sbjct: 193 SVWLDVPLEALARRIAKVGTASRPLLDQ-PSGDPYTMAFSKLSTLAEQRGDAYANADVRV 251
Query: 213 SLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
SLE IA KLGH DVS LTP+ IA+E+L +IE F+ E+
Sbjct: 252 SLEEIASKLGHDDVSKLTPIDIALESLYKIESFVTED 288
>gi|326533332|dbj|BAJ93638.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 304
Score = 299 bits (766), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 144/218 (66%), Positives = 180/218 (82%), Gaps = 1/218 (0%)
Query: 33 NVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLI 92
N+H +D+A +LK KS+E+ L+GRCIYLVGMMGSGK+TVGKIL+ VLGYSFFD D L+
Sbjct: 72 NLHNSVDDALLLKRKSEEVLFQLNGRCIYLVGMMGSGKSTVGKILAEVLGYSFFDSDKLV 131
Query: 93 EQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGI 152
EQ+V SVA+IFK++GE FFR+ E+ VL+ LS MR+LVV+TGGGAV RP+NW+ M+KG+
Sbjct: 132 EQAVGMPSVAQIFKVHGEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNWKNMKKGL 191
Query: 153 SVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
SVWLDVPLEALA+RIA VGT SRPLL Q SGD YT A ++LSTL E+RG+AYANA+ RV
Sbjct: 192 SVWLDVPLEALARRIAKVGTASRPLLDQ-PSGDPYTMAFSKLSTLAEQRGDAYANADVRV 250
Query: 213 SLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEED 250
SLE IA KLGH DVS LTP+ IA+E+L +IE F+ E++
Sbjct: 251 SLEEIASKLGHDDVSKLTPIDIALESLHKIESFVVEDN 288
>gi|226505012|ref|NP_001152400.1| shikimate kinase [Zea mays]
gi|195655879|gb|ACG47407.1| shikimate kinase [Zea mays]
Length = 307
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 144/217 (66%), Positives = 174/217 (80%), Gaps = 1/217 (0%)
Query: 33 NVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLI 92
N H +DEA +LK KS+E+ YL+GRCIYLVGMMGSGK+TVGKI+S VLGYSFFD D L+
Sbjct: 71 NSHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLV 130
Query: 93 EQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGI 152
EQ+V SVA+IFK++ E FFR+ E+ VL+ LS MR+LVV+TGGGAV RPINWRYM+KG+
Sbjct: 131 EQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPINWRYMKKGL 190
Query: 153 SVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
SVWLDVPL+ALA+RIA VGT SRPLL Q SGD Y A ++LS L ++RG+AYANA+ RV
Sbjct: 191 SVWLDVPLDALARRIAKVGTASRPLLDQ-PSGDPYAMAFSKLSMLAQQRGDAYANADVRV 249
Query: 213 SLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
SLE IA K GH DVS LTP IAIE+L +IE F+ E
Sbjct: 250 SLEEIACKQGHDDVSKLTPTDIAIESLHKIESFVIEH 286
>gi|222635237|gb|EEE65369.1| hypothetical protein OsJ_20662 [Oryza sativa Japonica Group]
Length = 272
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/231 (64%), Positives = 182/231 (78%), Gaps = 2/231 (0%)
Query: 20 TFN-SLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILS 78
FN +LS S+L ++H +DEA +LK KS+E+ YL+GRCIYLVGMMGSGK+TV KIL+
Sbjct: 21 NFNEALSLSLLGHDSLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVAKILA 80
Query: 79 GVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA 138
VLGYSFFD D L+EQ+V SVA+IFK + E FFR+ E+ VL+ LS MR+LVV+TGGGA
Sbjct: 81 EVLGYSFFDSDKLVEQAVGMPSVAQIFKEHSEAFFRDNESSVLRDLSSMRRLVVATGGGA 140
Query: 139 VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLW 198
V RP+NW+YM+KG+SVWLDVPL+ALA+RIA VGT SRPLL Q S D YT A ++LS L
Sbjct: 141 VIRPVNWKYMKKGLSVWLDVPLDALARRIAQVGTASRPLLDQ-PSSDPYTAAFSKLSMLA 199
Query: 199 EERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
E+RG+AYANA+ARVSLE IA K GH DVS LTP IAIEAL +IE F+ E
Sbjct: 200 EQRGDAYANADARVSLEEIAAKQGHDDVSKLTPTDIAIEALLKIENFVTEH 250
>gi|255583009|ref|XP_002532273.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
gi|223528033|gb|EEF30113.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
Length = 313
Score = 296 bits (757), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 142/176 (80%), Positives = 157/176 (89%), Gaps = 1/176 (0%)
Query: 14 SVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTV 73
S +VSC++ + SVLESG++HA DE+ +LKNKSQ +EPYLSGRCIYLVGMMGSGKTTV
Sbjct: 63 SSEVSCSYKNSPVSVLESGSLHASSDESLILKNKSQVVEPYLSGRCIYLVGMMGSGKTTV 122
Query: 74 GKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVS 133
GK+LS VLGYSF DCD+LIEQ VDGTSVAEIFKLYGEGFFR KETEVL+ LS+M Q+VVS
Sbjct: 123 GKVLSQVLGYSFCDCDSLIEQDVDGTSVAEIFKLYGEGFFRMKETEVLKNLSMMHQIVVS 182
Query: 134 TGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTE 189
TGGGAV RPINW YMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH ESGDAYT+
Sbjct: 183 TGGGAVIRPINWEYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHH-ESGDAYTK 237
>gi|413938896|gb|AFW73447.1| shikimate kinase [Zea mays]
Length = 305
Score = 295 bits (756), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 174/217 (80%), Gaps = 1/217 (0%)
Query: 33 NVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLI 92
N H +DEA +LK KS+E+ YL+GRCIYLVGMMGSGK+TVGKI+S VLGYSFFD D L+
Sbjct: 69 NSHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLV 128
Query: 93 EQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGI 152
EQ+V SVA+IFK++ E FFR+ E+ VL+ LS MR+LVV+TGGGAV RPINWRYM++G+
Sbjct: 129 EQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPINWRYMKRGL 188
Query: 153 SVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
SVWLDVPL+ALA+RIA VGT SRPLL Q SGD Y A ++LS L ++RG+AYANA+ RV
Sbjct: 189 SVWLDVPLDALARRIAKVGTASRPLLDQ-PSGDPYAMAFSKLSMLAQQRGDAYANADVRV 247
Query: 213 SLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
SLE IA K GH DVS LTP IAIE+L +IE F+ E
Sbjct: 248 SLEEIACKQGHDDVSKLTPTDIAIESLHKIESFVIEH 284
>gi|226495257|ref|NP_001149678.1| shikimate kinase [Zea mays]
gi|194700058|gb|ACF84113.1| unknown [Zea mays]
gi|194700758|gb|ACF84463.1| unknown [Zea mays]
gi|195629356|gb|ACG36319.1| shikimate kinase [Zea mays]
gi|413924549|gb|AFW64481.1| Shikimate kinase [Zea mays]
Length = 303
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 175/217 (80%), Gaps = 1/217 (0%)
Query: 33 NVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLI 92
N+H +DEA +LK KS+E+ YL+GRCIYLVGMMGSGK+TVGKI+S VLGYSFFD D L+
Sbjct: 67 NLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLV 126
Query: 93 EQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGI 152
EQ+V SVA+IFK++ E FFR+ E+ VL+ LS MR+LVV+TGGGAV RP+NW+YM+KG+
Sbjct: 127 EQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNWKYMKKGL 186
Query: 153 SVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
SVWLDVPL+ALA+RIA VGT SRPLL Q SGD YT A ++LS L E+RG+AYANA+ RV
Sbjct: 187 SVWLDVPLDALARRIAKVGTASRPLLDQ-PSGDPYTMAFSKLSMLAEQRGDAYANADVRV 245
Query: 213 SLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
SLE IA K GH DVS L P IAIE+L +IE F+ E
Sbjct: 246 SLEEIASKQGHGDVSKLMPTDIAIESLHKIESFVIEH 282
>gi|326530582|dbj|BAJ97717.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 301
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/244 (59%), Positives = 189/244 (77%), Gaps = 4/244 (1%)
Query: 9 QRSYDSVKVSCTFNSL---SASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGM 65
+RS D ++ + L ++ + VH DEA VLK K++++ PYL+ RC+YLVGM
Sbjct: 54 RRSADPIRGAARLKGLCCQKSADAGTEKVHYSADEALVLKQKAEDVLPYLNDRCVYLVGM 113
Query: 66 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 125
MGSGKTTVGKI++ VLGYSFFD D L+EQSV SVAEIF+++ E FFR+ E+EVL+ LS
Sbjct: 114 MGSGKTTVGKIIAEVLGYSFFDSDKLVEQSVGIPSVAEIFQVHSEAFFRDNESEVLRDLS 173
Query: 126 LMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 185
M +L+V+TGGGAV RPINW YM+KG+++WLDVP++ALA+RIAAVGT SRPLLH ESGD
Sbjct: 174 SMHRLIVATGGGAVIRPINWSYMRKGLTIWLDVPVDALARRIAAVGTASRPLLHH-ESGD 232
Query: 186 AYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGF 245
Y +A +L+TL+E+R ++YANA+ARVSLENIA + GH DV+ LTP IAIEAL ++E F
Sbjct: 233 PYAKAYAKLATLFEQRMDSYANADARVSLENIAFRQGHNDVNVLTPSAIAIEALLKMESF 292
Query: 246 LKEE 249
L E+
Sbjct: 293 LTEK 296
>gi|224035559|gb|ACN36855.1| unknown [Zea mays]
Length = 247
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 174/217 (80%), Gaps = 1/217 (0%)
Query: 33 NVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLI 92
N H +DEA +LK KS+E+ YL+GRCIYLVGMMGSGK+TVGKI+S VLGYSFFD D L+
Sbjct: 11 NSHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLV 70
Query: 93 EQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGI 152
EQ+V SVA+IFK++ E FFR+ E+ VL+ LS MR+LVV+TGGGAV RPINWRYM++G+
Sbjct: 71 EQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPINWRYMKRGL 130
Query: 153 SVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
SVWLDVPL+ALA+RIA VGT SRPLL Q SGD Y A ++LS L ++RG+AYANA+ RV
Sbjct: 131 SVWLDVPLDALARRIAKVGTASRPLLDQ-PSGDPYAMAFSKLSMLAQQRGDAYANADVRV 189
Query: 213 SLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
SLE IA K GH DVS LTP IAIE+L +IE F+ E
Sbjct: 190 SLEEIACKQGHDDVSKLTPTDIAIESLHKIESFVIEH 226
>gi|414585204|tpg|DAA35775.1| TPA: hypothetical protein ZEAMMB73_776202 [Zea mays]
Length = 216
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/206 (67%), Positives = 175/206 (84%), Gaps = 1/206 (0%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L+ K+Q++ PYL GRC+YLVGMMGSGKTTVGKILS VLGYSFFD D L+E++V +SVAE
Sbjct: 7 LQQKAQDVLPYLDGRCVYLVGMMGSGKTTVGKILSEVLGYSFFDSDKLVEKAVGISSVAE 66
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEAL 163
IF+L+ E FFR+ E+EVL LS M +LVV+TGGGAV RPINW YM+KG++VWLDVPL+AL
Sbjct: 67 IFQLHSETFFRDNESEVLTDLSSMHRLVVATGGGAVIRPINWSYMKKGLTVWLDVPLDAL 126
Query: 164 AQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGH 223
A+RIAAVGT SRPLLHQ ESGD Y +A +L++L+E+R ++YANA+ARVSLE+IA+K GH
Sbjct: 127 ARRIAAVGTASRPLLHQ-ESGDPYAKAYAKLTSLFEQRMDSYANADARVSLEHIALKQGH 185
Query: 224 KDVSSLTPVTIAIEALEQIEGFLKEE 249
DV+ LTP TIAIEAL ++E FL E+
Sbjct: 186 NDVTILTPSTIAIEALLKMESFLTEK 211
>gi|297603441|ref|NP_001054037.2| Os04g0640600 [Oryza sativa Japonica Group]
gi|75140480|sp|Q7X7H9.2|SK3_ORYSJ RecName: Full=Shikimate kinase 3, chloroplastic; Short=OsSK3;
Flags: Precursor
gi|38344899|emb|CAE02970.2| OSJNBb0079B02.2 [Oryza sativa Japonica Group]
gi|56805581|dbj|BAD83414.1| shikimate kinase 3 [Oryza sativa Japonica Group]
gi|116310881|emb|CAH67822.1| OSIGBa0138H21-OSIGBa0138E01.13 [Oryza sativa Indica Group]
gi|222629650|gb|EEE61782.1| hypothetical protein OsJ_16353 [Oryza sativa Japonica Group]
gi|255675822|dbj|BAF15951.2| Os04g0640600 [Oryza sativa Japonica Group]
Length = 287
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 141/211 (66%), Positives = 178/211 (84%), Gaps = 1/211 (0%)
Query: 39 DEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDG 98
DEA VLK K++++ PYL+ RCIYLVGMMGSGKTTVGKIL+ VLGYSFFD D L+E++V
Sbjct: 73 DEALVLKQKAEDVVPYLNDRCIYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGI 132
Query: 99 TSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDV 158
+SVAEIF+L+ E FFR+ E+EVL+ LS M +LVV+TGGGAV RPINW YM+KG ++WLDV
Sbjct: 133 SSVAEIFQLHSEAFFRDNESEVLRDLSSMHRLVVATGGGAVIRPINWSYMKKGSTIWLDV 192
Query: 159 PLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
PL+ALA+RIAAVGT SRPLLHQ ESGD Y +A +L+ L+E+R ++YANA+ARVSLE+IA
Sbjct: 193 PLDALARRIAAVGTASRPLLHQ-ESGDPYAKAYAKLTALFEQRMDSYANADARVSLEHIA 251
Query: 219 VKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
VK GH +V++LTP IAIEAL ++E FL E+
Sbjct: 252 VKQGHSNVTTLTPSAIAIEALLKMESFLTEK 282
>gi|297605427|ref|NP_001057199.2| Os06g0225800 [Oryza sativa Japonica Group]
gi|75107689|sp|Q5NTH3.1|SK2_ORYSJ RecName: Full=Shikimate kinase 2, chloroplastic; Short=OsSK2;
Flags: Precursor
gi|56805579|dbj|BAD83413.1| shikimate kinase 2 [Oryza sativa Japonica Group]
gi|218197836|gb|EEC80263.1| hypothetical protein OsI_22231 [Oryza sativa Indica Group]
gi|255676848|dbj|BAF19113.2| Os06g0225800 [Oryza sativa Japonica Group]
Length = 307
Score = 293 bits (749), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 174/217 (80%), Gaps = 1/217 (0%)
Query: 33 NVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLI 92
++H +DEA +LK KS+E+ YL+GRCIYLVGMMGSGK+TV KIL+ VLGYSFFD D L+
Sbjct: 70 SLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVAKILAEVLGYSFFDSDKLV 129
Query: 93 EQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGI 152
EQ+V SVA+IFK + E FFR+ E+ VL+ LS MR+LVV+TGGGAV RP+NW+YM+KG+
Sbjct: 130 EQAVGMPSVAQIFKEHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNWKYMKKGL 189
Query: 153 SVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
SVWLDVPL+ALA+RIA VGT SRPLL Q S D YT A ++LS L E+RG+AYANA+ARV
Sbjct: 190 SVWLDVPLDALARRIAQVGTASRPLLDQ-PSSDPYTAAFSKLSMLAEQRGDAYANADARV 248
Query: 213 SLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
SLE IA K GH DVS LTP IAIEAL +IE F+ E
Sbjct: 249 SLEEIAAKQGHDDVSKLTPTDIAIEALLKIENFVTEH 285
>gi|75107690|sp|Q5NTH4.1|SK1_ORYSJ RecName: Full=Shikimate kinase 1, chloroplastic; Short=OsSK1;
Flags: Precursor
gi|56805577|dbj|BAD83412.1| shikimate kinase 1 [Oryza sativa Japonica Group]
Length = 308
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 141/217 (64%), Positives = 174/217 (80%), Gaps = 1/217 (0%)
Query: 33 NVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLI 92
+H +DEA +LK KS+E+ YL+GRCIYLVGMMGSGK+TVGKI+S VLGYSFFD D L+
Sbjct: 72 TLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLV 131
Query: 93 EQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGI 152
EQ+V SVA+IFK++ E FFR+ E+ VL+ LS M++LVV+TGGGAV RP+NW+YM+KG+
Sbjct: 132 EQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVATGGGAVIRPVNWKYMKKGL 191
Query: 153 SVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
SVWLDVPL+ALA+RIA VGT SRPLL Q SGD YT A ++LS L E+RG+AYANA+ RV
Sbjct: 192 SVWLDVPLDALARRIAKVGTASRPLLDQ-PSGDPYTMAFSKLSMLAEQRGDAYANADVRV 250
Query: 213 SLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
SLE IA K GH DVS LTP IAIE+ +IE F+ E
Sbjct: 251 SLEEIASKQGHDDVSKLTPTDIAIESFHKIENFVIEH 287
>gi|357166256|ref|XP_003580651.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 298
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/217 (64%), Positives = 177/217 (81%), Gaps = 1/217 (0%)
Query: 33 NVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLI 92
VH DEA +LK K++++ P L+ RC+YLVGMMGSGKTTVGKI++ VLGYSFFD D L+
Sbjct: 78 KVHYSADEALILKQKAEDVLPCLNDRCVYLVGMMGSGKTTVGKIIAEVLGYSFFDSDKLV 137
Query: 93 EQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGI 152
EQ+V +SVAEIF+++ E FFR+ E+EVL+ LS M +LVV+TGGGAV RPINW YM+KG+
Sbjct: 138 EQAVGISSVAEIFQVHSEAFFRDNESEVLRDLSSMHRLVVATGGGAVIRPINWSYMRKGL 197
Query: 153 SVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
++WLDVPL+ALA+RIAAVGT SRPLLHQ ESGD Y +A +L+ L E+R ++YANA+ARV
Sbjct: 198 TIWLDVPLDALARRIAAVGTASRPLLHQ-ESGDTYAKAYAKLTALLEKRMDSYANADARV 256
Query: 213 SLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
SLEN+A K GH DV+ LTP IAIEAL ++E FL E+
Sbjct: 257 SLENVAFKHGHDDVNVLTPSAIAIEALLKMESFLTEK 293
>gi|145329214|ref|NP_001077936.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252148|gb|AEC07242.1| Shikimate kinase [Arabidopsis thaliana]
Length = 276
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/212 (67%), Positives = 176/212 (83%), Gaps = 4/212 (1%)
Query: 1 MEPNVASKQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCI 60
++P + QR S VSC+ N+ S+++LE+G+V+ P DE +LK K++E++PYL+GR +
Sbjct: 49 LQPERRNDQRRAVSPAVSCSDNN-SSALLETGSVY-PFDE-DILKRKAEEVKPYLNGRSM 105
Query: 61 YLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEV 120
YLVGMMGSGKTTVGK++S VLGY+FFDCDTLIEQ+++GTSVAEIF +GE FFR KET+
Sbjct: 106 YLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDA 165
Query: 121 LQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
L+KLS Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGTDSRPLLH
Sbjct: 166 LKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHD 225
Query: 181 CESGDAYTEALNRLSTLWEERGEAYANANARV 212
ESGDAY+ A RLS +W+ERGEAY NANARV
Sbjct: 226 -ESGDAYSVAFKRLSAIWDERGEAYTNANARV 256
>gi|125541140|gb|EAY87535.1| hypothetical protein OsI_08943 [Oryza sativa Indica Group]
Length = 401
Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 174/216 (80%), Gaps = 1/216 (0%)
Query: 34 VHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIE 93
+H +DEA +LK KS+E+ YL+GRCIYLVGMMGSGK+TVGKI+S VLGYSFFD D L+E
Sbjct: 73 LHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVE 132
Query: 94 QSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGIS 153
Q+V SVA+IFK++ E FFR+ E+ VL+ LS M++LVV+TGGGAV RP+NW+YM+KG+S
Sbjct: 133 QAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVATGGGAVIRPVNWKYMKKGLS 192
Query: 154 VWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
VWLDVPL+ALA+RIA VGT SRPLL Q SGD YT A ++LS L E+RG+AYANA+ RVS
Sbjct: 193 VWLDVPLDALARRIAKVGTASRPLLDQ-PSGDPYTMAFSKLSMLAEQRGDAYANADVRVS 251
Query: 214 LENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
LE IA K GH DVS LTP IAIE+ +IE F+ E
Sbjct: 252 LEEIASKQGHDDVSKLTPTDIAIESFHKIENFVIEH 287
>gi|222623677|gb|EEE57809.1| hypothetical protein OsJ_08387 [Oryza sativa Japonica Group]
Length = 464
Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/217 (64%), Positives = 174/217 (80%), Gaps = 1/217 (0%)
Query: 33 NVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLI 92
+H +DEA +LK KS+E+ YL+GRCIYLVGMMGSGK+TVGKI+S VLGYSFFD D L+
Sbjct: 72 TLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLV 131
Query: 93 EQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGI 152
EQ+V SVA+IFK++ E FFR+ E+ VL+ LS M++LVV+TGGGAV RP+NW+YM+KG+
Sbjct: 132 EQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVATGGGAVIRPVNWKYMKKGL 191
Query: 153 SVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
SVWLDVPL+ALA+RIA VGT SRPLL Q SGD YT A ++LS L E+RG+AYANA+ RV
Sbjct: 192 SVWLDVPLDALARRIAKVGTASRPLLDQ-PSGDPYTMAFSKLSMLAEQRGDAYANADVRV 250
Query: 213 SLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
SLE IA K GH DVS LTP IAIE+ +IE F+ E
Sbjct: 251 SLEEIASKQGHDDVSKLTPTDIAIESFHKIENFVIEH 287
>gi|357124743|ref|XP_003564057.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 302
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/217 (63%), Positives = 175/217 (80%), Gaps = 1/217 (0%)
Query: 33 NVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLI 92
+H +DEA +LK K++E+ L+GRCIYLVGMMGSGK+TVGKIL+ VLGYS+FD D+L+
Sbjct: 77 TLHNSVDEALLLKRKAEEVLFELNGRCIYLVGMMGSGKSTVGKILAEVLGYSYFDSDSLV 136
Query: 93 EQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGI 152
EQ+V SVA+IFK++ E FFR+ E+ VL+ LS M++LVV+TGGGAV RP+NWRYM+KG+
Sbjct: 137 EQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMQRLVVATGGGAVIRPVNWRYMKKGL 196
Query: 153 SVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
S+ LDVPL+ALA+RIA VGT SRPLL Q SGD YT A +LS L E+RG+AYANA+ RV
Sbjct: 197 SIMLDVPLDALAKRIAQVGTASRPLLDQ-PSGDPYTAAFTKLSMLAEQRGDAYANADVRV 255
Query: 213 SLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
SLE+IA K GH DVS LTP IAIEAL++I+ F+ E
Sbjct: 256 SLEDIAAKQGHDDVSQLTPTDIAIEALQKIQNFVMEH 292
>gi|363807180|ref|NP_001242093.1| uncharacterized protein LOC100807736 [Glycine max]
gi|255642221|gb|ACU21375.1| unknown [Glycine max]
Length = 253
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 128/189 (67%), Positives = 160/189 (84%), Gaps = 1/189 (0%)
Query: 9 QRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGS 68
+R +++VS +++++SAS+LESG+VHAP+DE +LKN+SQE +PYL+GRCIYLVGMMGS
Sbjct: 50 RRRTTALEVSSSYDNISASILESGSVHAPLDEELILKNRSQETQPYLNGRCIYLVGMMGS 109
Query: 69 GKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMR 128
GKTTVGKI+S VLGYSF D D L+E+ V G SV +IF+ +GE FFR KETEVL KLSL+
Sbjct: 110 GKTTVGKIMSQVLGYSFCDSDALVEEEVGGNSVVDIFEQHGETFFRNKETEVLHKLSLLH 169
Query: 129 QLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYT 188
+LV+STGGGAV RPINW+YM KG+SVWLDVP+EALAQRIAAVGT+SRPLL+ E+GD YT
Sbjct: 170 RLVISTGGGAVMRPINWKYMHKGVSVWLDVPVEALAQRIAAVGTNSRPLLNY-EAGDPYT 228
Query: 189 EALNRLSTL 197
A RLS +
Sbjct: 229 RAFMRLSAI 237
>gi|225463131|ref|XP_002265897.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
gi|297739345|emb|CBI29335.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 273 bits (697), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 136/229 (59%), Positives = 178/229 (77%), Gaps = 1/229 (0%)
Query: 26 ASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSF 85
A +ESGN +A D +LK K QE+ L+GRCI+LVGMMGSGKTTVGKILS LGYSF
Sbjct: 63 APAVESGNFYACFDGNWLLKKKGQEVASNLNGRCIFLVGMMGSGKTTVGKILSEALGYSF 122
Query: 86 FDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINW 145
D DT +E++V GTSV++IF GE FFR+ E+E L+KL+ + + VV+TGGGAV RPINW
Sbjct: 123 VDSDTFVEKAVGGTSVSQIFNQCGEKFFRDYESEALRKLASIPKQVVATGGGAVVRPINW 182
Query: 146 RYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
+YM++G+SV+LDVPL+ LA+RIA VGTDSRPLLH ESGDAYT+A L TL ++R EAY
Sbjct: 183 KYMKQGVSVFLDVPLDTLARRIADVGTDSRPLLH-FESGDAYTKAFVGLFTLSKKRTEAY 241
Query: 206 ANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEEDDMAI 254
ANA+A VSL++IA +LG +D+S +TP IA+E L QIE +L+ ++ + +
Sbjct: 242 ANADATVSLQHIAARLGLEDISDITPAAIAMEVLVQIENYLQGKNGIGM 290
>gi|147856126|emb|CAN80290.1| hypothetical protein VITISV_016550 [Vitis vinifera]
Length = 294
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/232 (59%), Positives = 178/232 (76%), Gaps = 1/232 (0%)
Query: 26 ASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSF 85
A +ESGN +A D +LK K QE+ L+GRCI+LVGMMGSGKTTVGKILS LGYSF
Sbjct: 63 APAVESGNFYACFDGNWLLKKKGQEVASNLNGRCIFLVGMMGSGKTTVGKILSEXLGYSF 122
Query: 86 FDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINW 145
D DT +E++V GTSV++IF GE FFR+ E+E L+KL+ + + VV+TGGGAV RPINW
Sbjct: 123 VDSDTFVEKAVGGTSVSQIFNQCGEKFFRDYESEALRKLASIPKQVVATGGGAVVRPINW 182
Query: 146 RYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
+YM++G+SV+LDVPL+ LA+RIA VGTDSRPLLH ESGDAYT+A L TL ++R EAY
Sbjct: 183 KYMKQGVSVFLDVPLDXLARRIADVGTDSRPLLH-FESGDAYTKAFVGLFTLSKKRTEAY 241
Query: 206 ANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEEDDMAIAGY 257
ANA+A VSL++IA LG +D+S +TP IA+E L QIE +L+ ++ +I +
Sbjct: 242 ANADATVSLQHIAASLGLEDISDVTPAAIAMEVLVQIENYLQGKNGTSIGMF 293
>gi|116787038|gb|ABK24350.1| unknown [Picea sitchensis]
Length = 318
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 174/231 (75%), Gaps = 2/231 (0%)
Query: 17 VSCTFNSLSA-SVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGK 75
+SCT N A S ++ + E +LK K++EI P+L G+CIYLVGMMGSGKTTVGK
Sbjct: 78 LSCTSNGRYALSEVKKDELSTWDHETLILKKKAEEIIPHLKGKCIYLVGMMGSGKTTVGK 137
Query: 76 ILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTG 135
ILS VLGY FFD D L+E++ G SVA+IFK E FR+ E+EVL++LS M +LV++TG
Sbjct: 138 ILSEVLGYYFFDSDQLVEEASGGASVAQIFKERNEQGFRDSESEVLKQLSTMYRLVIATG 197
Query: 136 GGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLS 195
GGAV RP NW YM++GI+VWLDVPLEALA R+ AVGT+SRPLL Q S D Y++AL RL+
Sbjct: 198 GGAVVRPQNWNYMRQGITVWLDVPLEALAARVVAVGTESRPLLGQA-SDDCYSQALTRLT 256
Query: 196 TLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFL 246
L+E+R EAY +++ +VSL +IAV+LG+KDV+ L+P IAIEAL ++ +
Sbjct: 257 KLYEDRAEAYKSSDVKVSLRDIAVELGNKDVARLSPTVIAIEALMEMSKIM 307
>gi|218195681|gb|EEC78108.1| hypothetical protein OsI_17614 [Oryza sativa Indica Group]
Length = 253
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/186 (67%), Positives = 157/186 (84%), Gaps = 1/186 (0%)
Query: 64 GMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK 123
GMMGSGKTTVGKIL+ VLGYSFFD D L+E++V +SVAEIF+L+ E FFR+ E+EVL+
Sbjct: 64 GMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFRDNESEVLRD 123
Query: 124 LSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 183
LS M +LVV+TGGGAV RPINW YM+KG ++WLDVPL+ALA+RIAAVGT SRPLLHQ ES
Sbjct: 124 LSSMHRLVVATGGGAVIRPINWSYMKKGSTIWLDVPLDALARRIAAVGTASRPLLHQ-ES 182
Query: 184 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 243
GD Y +A +L+ L+E+R ++YANA+ARVSLE+IAVK GH +V++LTP IAIEAL ++E
Sbjct: 183 GDPYAKAYAKLTALFEQRMDSYANADARVSLEHIAVKQGHSNVTTLTPSAIAIEALLKME 242
Query: 244 GFLKEE 249
FL E+
Sbjct: 243 SFLTEK 248
>gi|5042170|emb|CAB44689.1| shikimate kinase-like protein [Arabidopsis thaliana]
gi|7270938|emb|CAB80617.1| shikimate kinase-like protein [Arabidopsis thaliana]
Length = 305
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 137/237 (57%), Positives = 166/237 (70%), Gaps = 8/237 (3%)
Query: 25 SASVLESGNV-HAPIDEAQVLKNKSQEI----EPYLSGRCIYLVGMMGSGKTTVGKILSG 79
S+++LE+G++ H+P DE Q + I + S CI +V
Sbjct: 64 SSALLETGSLLHSPFDEEQQILKAMDYISFCRKKLKSFSCILVVEQFPRECVRYDGFREN 123
Query: 80 VL--GYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLM-RQLVVSTGG 136
Y CDTLIEQ++ GTSVAEIF+ +GE FREKETE L+KLSLM Q+VVSTGG
Sbjct: 124 DCREDYGKIACDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGG 183
Query: 137 GAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLST 196
GAV RPINW+YM KGIS+WLDVPLEALA RIAAVGT SRPLLH ESGD YT ALNRLST
Sbjct: 184 GAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAALNRLST 243
Query: 197 LWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEEDDMA 253
+W+ RGEAY A+ARVSLENI +KLG++ VS LTP IAIEA EQ++ +L++ED MA
Sbjct: 244 IWDARGEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEKEDGMA 300
>gi|413924548|gb|AFW64480.1| hypothetical protein ZEAMMB73_201621 [Zea mays]
Length = 205
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 123/185 (66%), Positives = 149/185 (80%), Gaps = 1/185 (0%)
Query: 65 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 124
MMGSGK+TVGKI+S VLGYSFFD D L+EQ+V SVA+IFK++ E FFR+ E+ VL+ L
Sbjct: 1 MMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDL 60
Query: 125 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 184
S MR+LVV+TGGGAV RP+NW+YM+KG+SVWLDVPL+ALA+RIA VGT SRPLL Q SG
Sbjct: 61 SSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQ-PSG 119
Query: 185 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 244
D YT A ++LS L E+RG+AYANA+ RVSLE IA K GH DVS L P IAIE+L +IE
Sbjct: 120 DPYTMAFSKLSMLAEQRGDAYANADVRVSLEEIASKQGHGDVSKLMPTDIAIESLHKIES 179
Query: 245 FLKEE 249
F+ E
Sbjct: 180 FVIEH 184
>gi|262181535|gb|ACY29658.1| shikimate kinase 02 [Vitis vinifera]
Length = 228
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 123/184 (66%), Positives = 146/184 (79%), Gaps = 1/184 (0%)
Query: 1 MEPNVASKQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCI 60
+P S + + +++ S + + A +LESG+ +DEA +LKNKSQEI PY+ GRC+
Sbjct: 46 FQPRRTSNWQKHVALEASGSCRNFPAPILESGSFPPSLDEALILKNKSQEILPYIDGRCV 105
Query: 61 YLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEV 120
YLVGMMGSGKTT+GKIL VLGYSF D DTL+E +V GTSVAEIF LYGEGFFR KE+E
Sbjct: 106 YLVGMMGSGKTTIGKILPEVLGYSFCDSDTLVELAVKGTSVAEIFNLYGEGFFRNKESET 165
Query: 121 LQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
LQKLSL +VVSTGGGAV RPINW+YM KGISVWLDVPLEALA+RI+AVGT+SRPLLH
Sbjct: 166 LQKLSLTHHMVVSTGGGAVIRPINWKYMAKGISVWLDVPLEALARRISAVGTNSRPLLHH 225
Query: 181 CESG 184
ESG
Sbjct: 226 -ESG 228
>gi|224066583|ref|XP_002302148.1| shikimate kinase [Populus trichocarpa]
gi|222843874|gb|EEE81421.1| shikimate kinase [Populus trichocarpa]
Length = 223
Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 129/219 (58%), Positives = 168/219 (76%), Gaps = 3/219 (1%)
Query: 29 LESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDC 88
+ESG+++A DE ++LK K++E+ P L+ CI+L+GMMG GKTTVGK+LS LGY+F D
Sbjct: 1 MESGDLYAFFDE-RLLKKKAKELAPCLNSCCIFLIGMMGCGKTTVGKVLSEALGYAFVDS 59
Query: 89 DTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM 148
DT +EQ+V SVA+IF+ +GE FR+ E++ LQ+LSL Q VV+TG GAV PINW YM
Sbjct: 60 DTCVEQAVGEISVAQIFQKHGESVFRDNESKALQELSLKSQQVVATGDGAVLHPINWEYM 119
Query: 149 QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
+KGI+V+LDVPL+ALA+RIAAVGTDSRPLL +SGD YT+AL RLSTL E+R E ++A
Sbjct: 120 RKGITVFLDVPLDALARRIAAVGTDSRPLL-DFDSGDPYTKALMRLSTLLEKRVEKCSSA 178
Query: 209 NARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLK 247
+ VSL +A L +DVS LTP IAIE LEQIE +L+
Sbjct: 179 DVTVSLSKLADDL-EEDVSHLTPTIIAIEVLEQIEKYLR 216
>gi|413938895|gb|AFW73446.1| hypothetical protein ZEAMMB73_578634 [Zea mays]
Length = 257
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/177 (66%), Positives = 146/177 (82%), Gaps = 1/177 (0%)
Query: 33 NVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLI 92
N H +DEA +LK KS+E+ YL+GRCIYLVGMMGSGK+TVGKI+S VLGYSFFD D L+
Sbjct: 69 NSHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLV 128
Query: 93 EQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGI 152
EQ+V SVA+IFK++ E FFR+ E+ VL+ LS MR+LVV+TGGGAV RPINWRYM++G+
Sbjct: 129 EQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPINWRYMKRGL 188
Query: 153 SVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
SVWLDVPL+ALA+RIA VGT SRPLL Q SGD Y A ++LS L ++RG+AYANA+
Sbjct: 189 SVWLDVPLDALARRIAKVGTASRPLLDQ-PSGDPYAMAFSKLSMLAQQRGDAYANAD 244
>gi|255572361|ref|XP_002527119.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
gi|223533542|gb|EEF35282.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
Length = 282
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/230 (53%), Positives = 169/230 (73%), Gaps = 3/230 (1%)
Query: 8 KQRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMG 67
++R Y + +C + L+ S+L SGN+ D +LK K +++ L G C++LVGMMG
Sbjct: 55 QRRFYVGISNACR-DPLAPSLL-SGNICGSFDGYWLLKTKGKKVASGLKGCCVFLVGMMG 112
Query: 68 SGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLM 127
SGKTTVGKILS LGY+F D D +EQ+ G SV+ IF+ YGE +FR+ E+E LQKLS++
Sbjct: 113 SGKTTVGKILSEALGYTFVDSDEYVEQTAGGNSVSHIFQQYGEDYFRDIESEALQKLSII 172
Query: 128 RQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAY 187
+ VV+TGGG+V RPINW+YM++GI+V+LDVPL+ALA+RIAAVGTDSRPLLH +SGD Y
Sbjct: 173 PRQVVATGGGSVVRPINWKYMRQGITVFLDVPLDALARRIAAVGTDSRPLLH-LDSGDPY 231
Query: 188 TEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIE 237
T+A L TL ++R EAY++A+ VSL ++A LG +DVS + P IA+
Sbjct: 232 TKAFMGLFTLSKKRVEAYSDADVIVSLLDLADDLGFEDVSDVGPAAIALR 281
>gi|46849856|gb|AAT02351.1| shikimate kinase, partial [Cucumis sativus]
Length = 157
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/153 (74%), Positives = 131/153 (85%), Gaps = 1/153 (0%)
Query: 98 GTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLD 157
G SVAE+FK+YGE FFRE+ETE L+KLSLMRQ V+STGGGAVTR INW+YM KGISVWLD
Sbjct: 1 GISVAEVFKVYGEDFFRERETEALRKLSLMRQFVISTGGGAVTRSINWKYMHKGISVWLD 60
Query: 158 VPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
VPLEAL +RI+AVGT+SRPLLH +S DAY++ L RLSTL EERGEAYANA +VS E I
Sbjct: 61 VPLEALVKRISAVGTNSRPLLHH-DSNDAYSKTLVRLSTLLEERGEAYANAEVKVSCEKI 119
Query: 218 AVKLGHKDVSSLTPVTIAIEALEQIEGFLKEED 250
A KLG KDVS++TP+ IAIEALE+IE FLK ED
Sbjct: 120 AAKLGTKDVSNVTPMAIAIEALEEIETFLKRED 152
>gi|302770076|ref|XP_002968457.1| hypothetical protein SELMODRAFT_169767 [Selaginella moellendorffii]
gi|300164101|gb|EFJ30711.1| hypothetical protein SELMODRAFT_169767 [Selaginella moellendorffii]
Length = 300
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 165/241 (68%), Gaps = 7/241 (2%)
Query: 9 QRSYDSVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGS 68
R+ SV + C+ N+ + + ES +V D A LK+K +E+ L G C++L+GMMGS
Sbjct: 56 HRARRSVVLLCSQNA-NVAATESTSV----DTA--LKSKGKELARDLKGTCLFLIGMMGS 108
Query: 69 GKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMR 128
GK+TVGK LS LGY FFD D L+EQ+ G SVA+IFK E FR+ E+EVL +LS M
Sbjct: 109 GKSTVGKHLSDALGYYFFDSDKLVEQAAGGASVAQIFKQSNEEGFRDAESEVLSQLSGMY 168
Query: 129 QLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYT 188
+LVV+TGGGAV RP NW YM+ GI+V+LDVPL+ALA+R+ A GT+ RPLL + + A+
Sbjct: 169 RLVVATGGGAVVRPQNWGYMRHGITVYLDVPLDALAKRVVAAGTEKRPLLGEPQREFAHE 228
Query: 189 EALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKE 248
+ L RL+ L+EERG AY NA+ V L+ IA ++ KD+ LTP IA++ +E+ + ++
Sbjct: 229 QTLARLTKLYEERGMAYKNADVSVCLKMIANEMNAKDICELTPSIIALKIMERTQELIRS 288
Query: 249 E 249
+
Sbjct: 289 Q 289
>gi|302774428|ref|XP_002970631.1| hypothetical protein SELMODRAFT_147242 [Selaginella moellendorffii]
gi|300162147|gb|EFJ28761.1| hypothetical protein SELMODRAFT_147242 [Selaginella moellendorffii]
Length = 300
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 148/206 (71%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
LK+K +E+ L G C++L+GMMGSGK+TVGK LS LGY FFD D L+EQ+ G SVA+
Sbjct: 84 LKSKGKELARDLKGTCLFLIGMMGSGKSTVGKHLSDALGYYFFDSDKLVEQAAGGASVAQ 143
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEAL 163
IFK E FR+ E+EVL +LS M +LVV+TGGGAV RP NW YM+ GI+V+LDVPL+AL
Sbjct: 144 IFKQSNEEGFRDAESEVLSQLSGMYRLVVATGGGAVVRPQNWGYMRHGITVYLDVPLDAL 203
Query: 164 AQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGH 223
A+R+ A GT+ RPLL + + A+ + L RL+ L+EERG AY NA+ V L+ IA ++
Sbjct: 204 AKRVVAAGTEKRPLLGEPQREFAHEQTLARLTKLYEERGMAYKNADVSVCLKMIANEMNA 263
Query: 224 KDVSSLTPVTIAIEALEQIEGFLKEE 249
KD+ LTP IA++ +E+ + ++ +
Sbjct: 264 KDICELTPSIIAVKIMERTQELIRSQ 289
>gi|374256057|gb|AEZ00890.1| putative shikimate kinase 1 protein, partial [Elaeis guineensis]
Length = 164
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/151 (68%), Positives = 126/151 (83%), Gaps = 1/151 (0%)
Query: 39 DEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDG 98
DEA +LK K+++I L+G CIYLVGMMGSGKTTVGKILS VLGYSF D D L+EQ+V
Sbjct: 1 DEALILKRKAEDITSSLNGHCIYLVGMMGSGKTTVGKILSEVLGYSFIDSDKLVEQAVGV 60
Query: 99 TSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDV 158
SVA+IFK Y E FFR+ E++VL+ LS M +LVV+TGGGAV RP+NW+YM++G++VWLDV
Sbjct: 61 PSVAQIFKEYSEAFFRDNESKVLRDLSTMHRLVVATGGGAVIRPVNWKYMKQGMTVWLDV 120
Query: 159 PLEALAQRIAAVGTDSRPLLHQCESGDAYTE 189
PLEALA+RIAAVGT SRPLLHQ E GD YT+
Sbjct: 121 PLEALARRIAAVGTASRPLLHQ-EPGDPYTK 150
>gi|413924547|gb|AFW64479.1| hypothetical protein ZEAMMB73_201621 [Zea mays]
Length = 185
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 104/165 (63%), Positives = 128/165 (77%), Gaps = 1/165 (0%)
Query: 85 FFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPIN 144
F D L+EQ+V SVA+IFK++ E FFR+ E+ VL+ LS MR+LVV+TGGGAV RP+N
Sbjct: 1 MFYSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVN 60
Query: 145 WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEA 204
W+YM+KG+SVWLDVPL+ALA+RIA VGT SRPLL Q SGD YT A ++LS L E+RG+A
Sbjct: 61 WKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQ-PSGDPYTMAFSKLSMLAEQRGDA 119
Query: 205 YANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 249
YANA+ RVSLE IA K GH DVS L P IAIE+L +IE F+ E
Sbjct: 120 YANADVRVSLEEIASKQGHGDVSKLMPTDIAIESLHKIESFVIEH 164
>gi|302773918|ref|XP_002970376.1| hypothetical protein SELMODRAFT_411357 [Selaginella moellendorffii]
gi|300161892|gb|EFJ28506.1| hypothetical protein SELMODRAFT_411357 [Selaginella moellendorffii]
Length = 237
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 134/196 (68%), Gaps = 6/196 (3%)
Query: 47 KSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFK 106
K +E+ LSG C++LVGMMG GK+TV K +S L Y F D D L+E++V G +VA+IF
Sbjct: 35 KGREVAGDLSGTCLFLVGMMGCGKSTVAKDISEALSYEFQDSDKLVEKAV-GATVAKIFS 93
Query: 107 LYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQR 166
E FR E+E L +LS +VV+TGGGAV R NWRY+++GI+++LDVP+EALAQR
Sbjct: 94 DSSEEKFRAAESEALNQLSETSNVVVATGGGAVVRDENWRYLKQGITIYLDVPVEALAQR 153
Query: 167 IAAVGTDSRPLL----HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLG 222
+ A G + RPLL G+A+ +AL RLS ++EER +AY A+ ++S+ IA +LG
Sbjct: 154 VVAAGLEKRPLLVASGPDNSPGNAHEQALARLSKVYEERNKAYERADLKISVAKIASELG 213
Query: 223 HKDVSSLTPVTIAIEA 238
+D++ L P IA++A
Sbjct: 214 -RDLNELPPSMIALKA 228
>gi|302769450|ref|XP_002968144.1| hypothetical protein SELMODRAFT_409286 [Selaginella moellendorffii]
gi|300163788|gb|EFJ30398.1| hypothetical protein SELMODRAFT_409286 [Selaginella moellendorffii]
Length = 237
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 133/196 (67%), Gaps = 6/196 (3%)
Query: 47 KSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFK 106
K +E+ LSG C++LVGMMG GK+TV K +S L Y F D D L+E+++ G +VA+IF
Sbjct: 35 KGREVAGDLSGTCLFLVGMMGCGKSTVAKDISEALSYEFQDSDKLVEKAI-GATVAKIFS 93
Query: 107 LYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQR 166
E FR E+E L +LS +VV+TGGGAV R NWRY+++GI+++LDVP+EALAQR
Sbjct: 94 DSSEDKFRAAESEALNQLSETSNVVVATGGGAVVRDENWRYLKQGITIYLDVPVEALAQR 153
Query: 167 IAAVGTDSRPLL----HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLG 222
+ A G + RPLL G+A+ +AL RLS ++ ER +AY A+ ++S+ IA +LG
Sbjct: 154 VVAAGLEKRPLLVASGPDNSPGNAHEQALARLSKVYAERNKAYERADLKISVAKIASELG 213
Query: 223 HKDVSSLTPVTIAIEA 238
+D++ L P IA++A
Sbjct: 214 -RDLNELPPSMIALKA 228
>gi|115448691|ref|NP_001048125.1| Os02g0749300 [Oryza sativa Japonica Group]
gi|113537656|dbj|BAF10039.1| Os02g0749300 [Oryza sativa Japonica Group]
Length = 195
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 100/120 (83%)
Query: 33 NVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLI 92
+H +DEA +LK KS+E+ YL+GRCIYLVGMMGSGK+TVGKI+S VLGYSFFD D L+
Sbjct: 72 TLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLV 131
Query: 93 EQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGI 152
EQ+V SVA+IFK++ E FFR+ E+ VL+ LS M++LVV+TGGGAV RP+NW+YM+KG+
Sbjct: 132 EQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVATGGGAVIRPVNWKYMKKGL 191
>gi|32488697|emb|CAE03634.1| OSJNBb0003B01.26 [Oryza sativa Japonica Group]
Length = 231
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 122/205 (59%), Gaps = 58/205 (28%)
Query: 39 DEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDG 98
DEA VLK K++++ PYL+ RCIYLVGMMGSGKTTVGKIL+ VL
Sbjct: 73 DEALVLKQKAEDVVPYLNDRCIYLVGMMGSGKTTVGKILAEVL----------------- 115
Query: 99 TSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDV 158
G FF + YM+KG ++WLDV
Sbjct: 116 ----------GYSFF------------------------------DRSYMKKGSTIWLDV 135
Query: 159 PLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
PL+ALA+RIAAVGT SRPLLHQ ESGD Y +A +L+ L+E+R ++YANA+ARVSLE+IA
Sbjct: 136 PLDALARRIAAVGTASRPLLHQ-ESGDPYAKAYAKLTALFEQRMDSYANADARVSLEHIA 194
Query: 219 VKLGHKDVSSLTPVTIAIEALEQIE 243
VK GH +V++LTP IAIE + E
Sbjct: 195 VKQGHSNVTTLTPSAIAIEGKQPRE 219
>gi|168031989|ref|XP_001768502.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680215|gb|EDQ66653.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 300
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 132/207 (63%), Gaps = 13/207 (6%)
Query: 43 VLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVA 102
+LK K+ E+ L G CI+L+GMM +GK +VGK+L+ LGY FFD + L++Q+ DG ++
Sbjct: 100 LLKEKADELRDELQGTCIFLIGMMDNGKASVGKMLAKELGYYFFDSNDLVQQAADGEEIS 159
Query: 103 EIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEA 162
E E +RE ETEVL++LS M +LVV+TG G V NW Y++ GI VW+D+P+E
Sbjct: 160 E-----NEEGYREAETEVLKQLSSMGRLVVATGAGTVLNTENWGYLRHGIVVWIDIPVET 214
Query: 163 LAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLG 222
+A+ +R LL S D EAL++L+ ++EER E Y NA+A VS++ + +LG
Sbjct: 215 VAK-----DAKTRQLLVPNSSDD---EALSKLTKMYEERKEVYMNADATVSIQVLPAQLG 266
Query: 223 HKDVSSLTPVTIAIEALEQIEGFLKEE 249
+D S +TP A++ L I +KE+
Sbjct: 267 IEDSSLVTPAMTALQVLNAIRLLVKEK 293
>gi|255594862|ref|XP_002536182.1| conserved hypothetical protein [Ricinus communis]
gi|223520575|gb|EEF26201.1| conserved hypothetical protein [Ricinus communis]
Length = 180
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 102/126 (80%), Gaps = 1/126 (0%)
Query: 89 DTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM 148
D +EQ+ G SV+ IF+ YGE +FR+ E+E LQKLS++ + VV+TGGG+V RPINW+YM
Sbjct: 20 DEYVEQTAGGNSVSHIFQQYGEDYFRDIESEALQKLSIIPRQVVATGGGSVVRPINWKYM 79
Query: 149 QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
++GI+V+LDVPL+ALA+RIAAVGTDSRPLLH +SGD YT+A L TL ++R EAY++A
Sbjct: 80 RQGITVFLDVPLDALARRIAAVGTDSRPLLH-LDSGDPYTKAFMGLFTLSKKRVEAYSDA 138
Query: 209 NARVSL 214
+ VSL
Sbjct: 139 DVTVSL 144
>gi|168063482|ref|XP_001783700.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664765|gb|EDQ51472.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 168
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 112/172 (65%), Gaps = 8/172 (4%)
Query: 49 QEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLY 108
QE+ + + I+LVGMMG GK+TVGKIL+ LGY + D D IE+ G +V EIF+L
Sbjct: 1 QEVARLNNNKNIFLVGMMGCGKSTVGKILADALGYKYRDSDDEIEKIEGGLAVKEIFRLK 60
Query: 109 GEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIA 168
GE FR+ E++ L+KL + LVV+TGGGAV NW Y+ GI+VWLDVP++ LA+R+
Sbjct: 61 GETQFRKTESDALRKLCEKKDLVVATGGGAVIYDANWEYLGNGITVWLDVPVKVLAKRVT 120
Query: 169 AVGTDSRPLLHQCESGDA---YTEALNRLSTLWEERGEAYANANARVSLENI 217
AVGT SRPLL GD + L +LSTL +ER Y+ A+ R+ E I
Sbjct: 121 AVGTGSRPLL-----GDGCADFESVLLKLSTLMKERKAQYSKAHCRLCFEGI 167
>gi|56750655|ref|YP_171356.1| shikimate kinase [Synechococcus elongatus PCC 6301]
gi|81299703|ref|YP_399911.1| shikimate kinase [Synechococcus elongatus PCC 7942]
gi|81596488|sp|Q5N4D3.1|AROK_SYNP6 RecName: Full=Shikimate kinase; Short=SK
gi|116257513|sp|Q31PU5.1|AROK_SYNE7 RecName: Full=Shikimate kinase; Short=SK
gi|56685614|dbj|BAD78836.1| shikimate kinase [Synechococcus elongatus PCC 6301]
gi|81168584|gb|ABB56924.1| shikimate kinase [Synechococcus elongatus PCC 7942]
Length = 190
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 112/162 (69%), Gaps = 12/162 (7%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L+G ++LVG+MGSGKTT+GK+L+ LGY++ D D+LIE +V G S+ EIF GE FR
Sbjct: 7 LNGLDLFLVGLMGSGKTTIGKLLAESLGYTYVDTDSLIE-NVTGRSIPEIFASDGEAGFR 65
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ ET+VL++++ R+LVV+TGGG V RP NW Y+Q+G+ +WLDVP+ L +R+ G +
Sbjct: 66 QIETQVLEEVASYRRLVVATGGGIVIRPENWSYLQQGLVIWLDVPIPELLRRLE--GDQN 123
Query: 175 RPLLHQCESGDAYTEA-LNRLSTLWEERGEAYANANARVSLE 215
RPLL TEA L LWE+R + YA A+ R+++E
Sbjct: 124 RPLLQ--------TEAPATTLQALWEQRRDRYAQADLRIAIE 157
>gi|224129236|ref|XP_002328924.1| shikimate kinase [Populus trichocarpa]
gi|222839354|gb|EEE77691.1| shikimate kinase [Populus trichocarpa]
Length = 286
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 128/209 (61%), Gaps = 7/209 (3%)
Query: 39 DEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDG 98
D + +K ++ ++ P L G I+L+GM G KT +GK+L+ L Y FF+ D+L+E++ G
Sbjct: 73 DTSLQVKKRAADLSPELKGTSIFLLGMRGPLKTNLGKLLADALRYYFFNSDSLVEEAAGG 132
Query: 99 TSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDV 158
A K E FRE ETEVL++L+ M +LVV G GAV N ++ GIS+W+DV
Sbjct: 133 EFAARSLKERDEKGFRESETEVLKQLTSMGRLVVCAGDGAVQSSTNLGLLRHGISLWIDV 192
Query: 159 PLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
PL+ +A+ + T Q + ++++E L ++ +EE YA A+A++SL+NIA
Sbjct: 193 PLDIVARGVVEDKT-------QLAASESHSEVLEQVVATYEELRAGYATADAKISLQNIA 245
Query: 219 VKLGHKDVSSLTPVTIAIEALEQIEGFLK 247
VKLG+ ++ S+T +A+E L++IE +
Sbjct: 246 VKLGYDELDSVTTEDLALEVLKEIEKLTR 274
>gi|159464345|ref|XP_001690402.1| shikimate kinase [Chlamydomonas reinhardtii]
gi|158279902|gb|EDP05661.1| shikimate kinase [Chlamydomonas reinhardtii]
Length = 327
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 113/176 (64%), Gaps = 4/176 (2%)
Query: 44 LKNKSQEIEPYLSGRCIYL--VGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSV 101
+K + ++ P L G I+L VGMMGSGK+TVGK+L+ L Y+FFD D++IE + D V
Sbjct: 83 VKEVTDQLLPDLRGCNIWLFQVGMMGSGKSTVGKMLANTLKYAFFDTDSVIELAHDKKPV 142
Query: 102 AEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLE 161
++IF G+ +FR+ E++++++LS R LV+STGGGAV +P NW YM GI WL+ E
Sbjct: 143 SQIFAEEGQDYFRQCESQIIKELSPYRNLVISTGGGAVLKPQNWGYMHLGIVAWLNGDTE 202
Query: 162 ALAQRIAAVGTDSRPLL--HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLE 215
LA+R+A G + RPLL E D A +L L E+R + Y NA+ V+LE
Sbjct: 203 LLARRVAKDGIEKRPLLAADAPEGADMQQVAKTKLDALLEDRRKYYENADVVVTLE 258
>gi|255543635|ref|XP_002512880.1| protein with unknown function [Ricinus communis]
gi|223547891|gb|EEF49383.1| protein with unknown function [Ricinus communis]
Length = 292
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 126/210 (60%), Gaps = 9/210 (4%)
Query: 38 IDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVD 97
+D + LK ++ +I P L G I+LVGM S KT++GK+L+ L Y +FD D+L+E+
Sbjct: 80 LDSSLALKKRAADISPELKGTSIFLVGMRSSMKTSLGKLLADSLRYYYFDSDSLVEEVAS 139
Query: 98 GTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLD 157
G S A+ FK E FRE ETEVL++LS M +LVV G GAV N ++ GIS+W+D
Sbjct: 140 GASAAKSFKETDEKGFRESETEVLKQLSSMGRLVVCAGDGAVQSFTNLALLRHGISLWID 199
Query: 158 VPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
VPL+ +AQ A+ +S L SG A +E L L +E YA A+A +SL+ +
Sbjct: 200 VPLDMVAQ---AMSEESDQL-----SG-ADSEELTELIATFEAMRGGYATADATISLQKV 250
Query: 218 AVKLGHKDVSSLTPVTIAIEALEQIEGFLK 247
AV LG+ + S+T + +E L++IE +
Sbjct: 251 AVNLGYDALDSVTAEDMTLEVLKEIEKLTR 280
>gi|449464238|ref|XP_004149836.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
gi|449522321|ref|XP_004168175.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 307
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 142/232 (61%), Gaps = 9/232 (3%)
Query: 23 SLSASVLESG----NVHAPI---DEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGK 75
SL +S L S NV A + D + +K K+ ++ P L G I+LVG+ S KT +GK
Sbjct: 66 SLPSSCLASDGTALNVEAKVTVDDLSLEVKKKAMDVAPELKGTSIFLVGINSSIKTKLGK 125
Query: 76 ILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTG 135
+L+ VL Y +FD D+L+ + G + A+++K E F+ ETEVL++LS M +LVV G
Sbjct: 126 LLADVLRYYYFDSDSLVVEVSGGEAAAKLYKQSDEKGFQAFETEVLKQLSSMGRLVVCAG 185
Query: 136 GGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLS 195
GAV N ++ GI++W+D+PL+ +A+ A P+ SG +Y+E L +++
Sbjct: 186 NGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAE-DRSQHPVFDISTSG-SYSEVLGQIT 243
Query: 196 TLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLK 247
+L+++ + YA A+A +SL+ +A KLG+ D +++T +A+EAL++IE +
Sbjct: 244 SLYQKVKDGYATADALISLQKLASKLGYDDFNAVTTEDMAMEALKEIEKLTR 295
>gi|428201800|ref|YP_007080389.1| shikimate kinase [Pleurocapsa sp. PCC 7327]
gi|427979232|gb|AFY76832.1| shikimate kinase [Pleurocapsa sp. PCC 7327]
Length = 185
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 113/193 (58%), Gaps = 21/193 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++LVG+MG+GKTTVG+IL+ LGY FFD D LIE+ V G ++ EIF GE FR
Sbjct: 5 LQGVSVFLVGIMGTGKTTVGQILAQQLGYRFFDTDVLIER-VAGQTINEIFARQGEERFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +LS + V++TGGG V RPINW Y+ G+ VWLD P+E L +R+A T
Sbjct: 64 ELETQVLAELSAYTKSVIATGGGIVMRPINWSYLHHGLIVWLDAPVELLRKRLAEDTT-- 121
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL + +LS+L E R Y A+ ++++ + TP I
Sbjct: 122 RPLLQAIDRA-------KKLSSLLEIRRPLYQQADLQIAI-----------AQNQTPEQI 163
Query: 235 AIEALEQIEGFLK 247
+ +EQI LK
Sbjct: 164 TAKLIEQIPTVLK 176
>gi|428226691|ref|YP_007110788.1| shikimate kinase [Geitlerinema sp. PCC 7407]
gi|427986592|gb|AFY67736.1| shikimate kinase [Geitlerinema sp. PCC 7407]
Length = 194
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 102/161 (63%), Gaps = 10/161 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMG+GK+TVG++L+ LGY FFD D LIEQ+ G SV +IF GE FR
Sbjct: 7 LKGVNLYLIGMMGAGKSTVGRLLASRLGYHFFDTDALIEQAT-GQSVRQIFAESGEAIFR 65
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL +L + L++STGGG VT P NW Y++ G+ VWLDVP++ L +R+ G
Sbjct: 66 QLESQVLAQLCAQKNLLISTGGGIVTTPFNWSYLRHGVVVWLDVPVDTLYERLRRDG--D 123
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLE 215
RPLL + L L+ L +R YA A+ R+S +
Sbjct: 124 RPLLQT-------PDPLQTLTDLLAQRERLYAQADLRLSTQ 157
>gi|388510864|gb|AFK43498.1| unknown [Lotus japonicus]
Length = 280
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 124/209 (59%), Gaps = 11/209 (5%)
Query: 39 DEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDG 98
D + +K K+ ++ P L G I+LVGM GS KT++GK+L L Y +FD D+L+E+++ G
Sbjct: 71 DLSLAVKKKAADVSPELRGTSIFLVGMKGSLKTSLGKLLVEALRYYYFDSDSLVEEALGG 130
Query: 99 TSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDV 158
S A + E F E ETEVL++LS M +LVV G GAV N ++ GIS+W+DV
Sbjct: 131 VSAANSVRQSDEKGFSESETEVLKQLSSMGRLVVCAGNGAVQSKTNLALLRHGISLWIDV 190
Query: 159 PLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
PL+ +A+ + + +S A E +N L L+ + + YA A+A +SL+ +A
Sbjct: 191 PLDIVARDVI-----------EDQSQFAAFEEVNELGALYNKYKDGYATADAIISLQKVA 239
Query: 219 VKLGHKDVSSLTPVTIAIEALEQIEGFLK 247
+LG+ ++ +T +A+EAL +IE +
Sbjct: 240 SRLGYDNLDDITKEDMALEALREIEKLTR 268
>gi|443323785|ref|ZP_21052788.1| shikimate kinase [Gloeocapsa sp. PCC 73106]
gi|442786571|gb|ELR96301.1| shikimate kinase [Gloeocapsa sp. PCC 73106]
Length = 183
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 116/193 (60%), Gaps = 21/193 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YLVGMMG+GK+T+G+IL+ L Y FFD DT++E+ V ++ EIF GE FR
Sbjct: 8 LKGINVYLVGMMGTGKSTIGQILAHNLEYRFFDSDTVLER-VAQANITEIFATEGEEVFR 66
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +L + V++TGGG V +P NW Y+ G+ +WLD P+E L QR+A +
Sbjct: 67 ELETQVLSQLCAYTRSVIATGGGVVLKPKNWSYLHHGLVIWLDAPVELLYQRLAI--DQT 124
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL+ ++ L +L++L E+R YA A+ +++++ S TP I
Sbjct: 125 RPLLNG-------SDLLGKLTSLQEQRRSFYAEADLKITIQ-----------SEQTPEAI 166
Query: 235 AIEALEQIEGFLK 247
+ LEQI LK
Sbjct: 167 VDQILEQIPTLLK 179
>gi|411118274|ref|ZP_11390655.1| shikimate kinase [Oscillatoriales cyanobacterium JSC-12]
gi|410711998|gb|EKQ69504.1| shikimate kinase [Oscillatoriales cyanobacterium JSC-12]
Length = 190
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 115/192 (59%), Gaps = 21/192 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMG+GKTTVG++++ LGY FFD D +IEQ V G + +F GE FR
Sbjct: 9 LQGINLYLIGMMGAGKTTVGRLIAQALGYQFFDTDAVIEQ-VTGQPITALFTEMGEAGFR 67
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET VL +LS +L ++TGGG V R NW Y++ G+ VWLDVPLE L QR+ + +
Sbjct: 68 ELETRVLAELSTYTRLAIATGGGIVLRHENWGYLRHGVIVWLDVPLEQLQQRLQS--DTN 125
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL ++GD T RL TL ++R YA A+ ++ ++G TP +
Sbjct: 126 RPLL---QTGDLTT----RLQTLLDQRRSLYAQADV-----HVGYRVGE------TPTQV 167
Query: 235 AIEALEQIEGFL 246
A + L Q++ L
Sbjct: 168 AEQVLIQVQQVL 179
>gi|307109411|gb|EFN57649.1| hypothetical protein CHLNCDRAFT_34609 [Chlorella variabilis]
Length = 263
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/139 (52%), Positives = 95/139 (68%), Gaps = 1/139 (0%)
Query: 42 QVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSV 101
Q +++ + E+ L G ++LVGMMGSGK+TVGK++S LGY FFD DTLIEQ + V
Sbjct: 92 QQIEDTAAEVVEGLQGTSLFLVGMMGSGKSTVGKLISQALGYCFFDTDTLIEQ-LSQKKV 150
Query: 102 AEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLE 161
+EIF GE FRE ET+VL +LS + VV+TGGG T+ NW +MQ G+SVWL+ P
Sbjct: 151 SEIFAEDGEESFRELETQVLAELSPFKNCVVATGGGVPTKAENWGHMQGGVSVWLNGPPT 210
Query: 162 ALAQRIAAVGTDSRPLLHQ 180
LA R+ GT+SRPLL Q
Sbjct: 211 LLAHRVVGDGTESRPLLSQ 229
>gi|225451543|ref|XP_002273840.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
gi|296082301|emb|CBI21306.3| unnamed protein product [Vitis vinifera]
Length = 305
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 7/211 (3%)
Query: 38 IDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVD 97
+D + +K K+ EI P L G I+LVGM + KT VGK+L+ L Y FD D+L+E++
Sbjct: 81 VDLSLAVKKKAMEISPVLKGTSIFLVGMNSTIKTNVGKLLADALRYYHFDSDSLVEEACG 140
Query: 98 GTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLD 157
G S A+ K E F + ETEVL++LS M +LVV G G V N ++ GIS+W+D
Sbjct: 141 GESAAKSLKEQDEKGFHDSETEVLKQLSSMGRLVVCAGDGLVQSSTNLALLRHGISIWID 200
Query: 158 VPLEALAQRIAAVGTDSRPLLHQCESGDAYTEA-----LNRLSTLWEERGEAYANANARV 212
VP+E +A+ + G + + + ++Y+E +L+ ++EE YA A+A V
Sbjct: 201 VPIEMVAKNMIEEGVQIP--VTELSTAESYSETGDNQVFAQLAVVYEEMKGGYATADASV 258
Query: 213 SLENIAVKLGHKDVSSLTPVTIAIEALEQIE 243
SL+ +A +LG+ D+ ++T +A+E L++I+
Sbjct: 259 SLQKVASQLGYDDLDAVTTEDMAMEVLKEIQ 289
>gi|434396920|ref|YP_007130924.1| shikimate kinase [Stanieria cyanosphaera PCC 7437]
gi|428268017|gb|AFZ33958.1| shikimate kinase [Stanieria cyanosphaera PCC 7437]
Length = 182
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 116/206 (56%), Gaps = 27/206 (13%)
Query: 48 SQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKL 107
S IE L G IYL+GMMG GKTT+GK+L+ L Y FFD D LIE+ V S+ EIF
Sbjct: 2 STSIEQSLHGISIYLIGMMGVGKTTIGKLLAHQLNYRFFDTDVLIER-VTQQSIPEIFAE 60
Query: 108 YGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRI 167
GE FRE E +VLQ++S+ + V++TGGG V R INW Y+Q+G+ +WLDV +E L QR+
Sbjct: 61 SGEDNFRELEHQVLQEISVETKSVIATGGGIVERQINWSYLQQGLIIWLDVEVEVLKQRL 120
Query: 168 AAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVS 227
A +RPL ++L L ++R YA A+ R+ K +
Sbjct: 121 AE--DQNRPL-------------ADKLELLLQKRSSLYAQADLRL-----------KIAA 154
Query: 228 SLTPVTIAIEALEQIEGFLKEEDDMA 253
+ TP I + LE I +K E + +
Sbjct: 155 NQTPEAIVEQILELIPTVIKSESEFS 180
>gi|254422265|ref|ZP_05035983.1| shikimate kinase domain protein [Synechococcus sp. PCC 7335]
gi|196189754|gb|EDX84718.1| shikimate kinase domain protein [Synechococcus sp. PCC 7335]
Length = 239
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 100/160 (62%), Gaps = 3/160 (1%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+YL+GMMG+GKTT+G+ L+ LGY F D D LIEQS + T V+E+F GE FR+ ET+
Sbjct: 43 LYLIGMMGAGKTTIGRKLANRLGYGFVDTDALIEQSANQT-VSELFASAGESVFRQLETQ 101
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
VL ++S LVV+TGGG + +NW Y+ GI +WLDVP+ L R++ G SRPL+
Sbjct: 102 VLSQVSTYTNLVVATGGGVIIEQMNWSYLHHGIIIWLDVPIPILVARLS--GDSSRPLIK 159
Query: 180 QCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 219
T +RL+ L ER + YA A+ R+ E +V
Sbjct: 160 DSRPLIKDTNLSDRLAGLIAERRDLYAQADIRIGYEGKSV 199
>gi|428211742|ref|YP_007084886.1| shikimate kinase [Oscillatoria acuminata PCC 6304]
gi|428000123|gb|AFY80966.1| shikimate kinase [Oscillatoria acuminata PCC 6304]
Length = 182
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 115/201 (57%), Gaps = 21/201 (10%)
Query: 51 IEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGE 110
++ +L G +YL+GMMGSGKTTV +IL+ L Y + D D LIEQ V G S+ EIF GE
Sbjct: 1 MKQFLKGCNLYLIGMMGSGKTTVAQILAPQLEYRYLDSDRLIEQ-VAGQSIPEIFAESGE 59
Query: 111 GFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAV 170
FRE ET+VL +L LVV+TGGG + NW Y+Q G+ VWLDVP+E L QR+A
Sbjct: 60 AAFRELETKVLSELCAYTHLVVATGGGIILNRQNWSYLQHGVVVWLDVPVEQLYQRLA-- 117
Query: 171 GTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLT 230
G +RPLL + + +L +L ++R Y A+ RV +G +D T
Sbjct: 118 GDTTRPLLRD-------PDPMAKLRSLLDQRQSLYKQADVRVI-------VGPED----T 159
Query: 231 PVTIAIEALEQIEGFLKEEDD 251
P IA L +I LK+ +
Sbjct: 160 PEQIATGVLAEISKILKDHTN 180
>gi|113475204|ref|YP_721265.1| shikimate kinase [Trichodesmium erythraeum IMS101]
gi|110166252|gb|ABG50792.1| shikimate kinase [Trichodesmium erythraeum IMS101]
Length = 184
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 109/193 (56%), Gaps = 21/193 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YLVGMMG+GKTTVG +L+ LGYSF D D LI Q+ G S+ EIF GE FR
Sbjct: 9 LQGVNLYLVGMMGAGKTTVGHLLAQHLGYSFLDTDNLITQAA-GKSINEIFATEGEAAFR 67
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET +L ++S + L ++TGGG V NW Y++ GI VWLDVP+E L R+ G +
Sbjct: 68 ELETNILSEISSYKNLTIATGGGIVISRFNWSYLRHGIVVWLDVPVEVLYSRLQ--GDQT 125
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPL+ + L RL + EER Y A+ V++ D+ TP +
Sbjct: 126 RPLIQN-------SNPLARLQAILEERRPFYNCADVHVNV----------DIQD-TPQQV 167
Query: 235 AIEALEQIEGFLK 247
I LE+I+ LK
Sbjct: 168 TILTLEEIKKVLK 180
>gi|220908896|ref|YP_002484207.1| shikimate kinase [Cyanothece sp. PCC 7425]
gi|219865507|gb|ACL45846.1| Shikimate kinase [Cyanothece sp. PCC 7425]
Length = 169
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 104/163 (63%), Gaps = 17/163 (10%)
Query: 65 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 124
MMGSGKT+ K+L+ LGY +FD DTLIEQ + G SV EIF +GE FR+ ET+VL +L
Sbjct: 1 MMGSGKTSTAKLLAQSLGYRYFDTDTLIEQ-LAGCSVREIFARWGEPQFRQWETQVLAEL 59
Query: 125 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 184
S + LV++TGGG V PINW Y+ G+ VWL+VPLE L+QR+ VG +RPLL
Sbjct: 60 SPYKNLVIATGGGIVLNPINWSYLHHGLVVWLNVPLEELSQRL--VGDRTRPLLAD---- 113
Query: 185 DAYTEALNRLSTLWEERGEAYANANARV------SLENIAVKL 221
L RL TL ++R YA A+ +V S E +A+++
Sbjct: 114 ----NPLERLQTLLDQRRPYYAQADLQVQVRSGESAEQVALRV 152
>gi|427714678|ref|YP_007063302.1| shikimate kinase [Synechococcus sp. PCC 6312]
gi|427378807|gb|AFY62759.1| shikimate kinase [Synechococcus sp. PCC 6312]
Length = 188
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 101/162 (62%), Gaps = 10/162 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L+G +YL+GMMGSGKTT G+ L+ LGY F D D LIEQ V G SV+EIF GE FR
Sbjct: 14 LNGTNLYLIGMMGSGKTTTGQELAAALGYRFMDTDRLIEQ-VAGQSVSEIFAQAGEATFR 72
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ ET+VL ++S LVV+TGGG + P+NW Y+ G+ +WL V + L R+A G +
Sbjct: 73 QLETQVLAEVSCYHHLVVATGGGIILEPMNWSYLHHGLVIWLKVSIPNLVNRLA--GDTT 130
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
RPLL A+ +L+TL + R E YA A+ +++ +
Sbjct: 131 RPLL-------AHAALAEKLTTLAQARNEFYAQADLTLTIAD 165
>gi|166364892|ref|YP_001657165.1| shikimate kinase [Microcystis aeruginosa NIES-843]
gi|238687539|sp|B0JFW8.1|AROK_MICAN RecName: Full=Shikimate kinase; Short=SK
gi|166087265|dbj|BAG01973.1| shikimate kinase [Microcystis aeruginosa NIES-843]
Length = 190
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 105/163 (64%), Gaps = 10/163 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++L+GMMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FR
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFVDEGEATFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +LS + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ S
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEILVKRLKQ--DTS 126
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
RPLL T+ ++L L E+R YA A+ R+ + ++
Sbjct: 127 RPLLQS-------TDLDSKLELLLEQRRGLYAEADLRIVVSDL 162
>gi|427704162|ref|YP_007047384.1| shikimate kinase [Cyanobium gracile PCC 6307]
gi|427347330|gb|AFY30043.1| shikimate kinase [Cyanobium gracile PCC 6307]
Length = 215
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 118/213 (55%), Gaps = 22/213 (10%)
Query: 36 APIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQS 95
AP D+A + +++ L G IYLVGMMG+GK+ VG+ L+ LGY F D DT + +
Sbjct: 2 APADDAPP-RPSHRDLARRLDGLNIYLVGMMGAGKSAVGRPLAEALGYRFIDADTALGE- 59
Query: 96 VDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVW 155
V G +AEIF GE FR ET VL ++ LVV+TGGGAV RP NW +M++G+ VW
Sbjct: 60 VAGRPIAEIFASDGEDGFRTLETAVLNGIASWHSLVVATGGGAVIRPENWGHMRQGLVVW 119
Query: 156 LDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLE 215
LD P + L +R+AA T RPLL DA A RL L ER YA A+ V+ +
Sbjct: 120 LDAPADELVRRLAADPT-PRPLL------DAPDPA-ARLEALLHERRPLYAQADLTVAQQ 171
Query: 216 NIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKE 248
TP +A++ LE + L++
Sbjct: 172 GG------------TPAAVALQVLEALPSVLRD 192
>gi|334121375|ref|ZP_08495445.1| Shikimate kinase [Microcoleus vaginatus FGP-2]
gi|333455089|gb|EGK83750.1| Shikimate kinase [Microcoleus vaginatus FGP-2]
Length = 183
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 114/195 (58%), Gaps = 21/195 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G IYLVGMMGSGKTTVG+IL+ L Y FFD D LI + V S+AEIF GE FR
Sbjct: 4 LRGVNIYLVGMMGSGKTTVGRILAKKLKYRFFDTDELIVR-VANQSIAEIFAQEGEEAFR 62
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +LS + VV+TGGG V R +NW Y+ G+ VWLDVP++ L R+ + +
Sbjct: 63 ELETKVLGELSAYQNSVVATGGGIVARSMNWGYLHYGVVVWLDVPVDQLYDRLRS--DTA 120
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL + E ++L +L +ER Y A+ RV +G K P +
Sbjct: 121 RPLLQEG-------EIKSKLQSLLKERERFYTQADVRVY-----AGVGEK------PEAV 162
Query: 235 AIEALEQIEGFLKEE 249
A A+E+I+ +K E
Sbjct: 163 ATRAIEEIQKVIKSE 177
>gi|300865613|ref|ZP_07110388.1| shikimate kinase [Oscillatoria sp. PCC 6506]
gi|300336397|emb|CBN55538.1| shikimate kinase [Oscillatoria sp. PCC 6506]
Length = 176
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 114/195 (58%), Gaps = 22/195 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YLVGMMG+GKTTVG+ L+ LGY FFD D +I + V S++EIF GE FR
Sbjct: 4 LRGVNLYLVGMMGAGKTTVGRWLASELGYHFFDTDDVISK-VANLSISEIFARDGEEAFR 62
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL +LS ++L+V+TGGG V R +NW Y+ GI VWLDVP+E L R+ +S
Sbjct: 63 QLESQVLGELSAYKKLIVATGGGIVLRQMNWSYLHHGIVVWLDVPVEELCDRLRE--DNS 120
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL + E LN +R YA A+ RV+ V S TP +
Sbjct: 121 RPLLREGEPRAILQNILN-------QRQRFYAQADVRVA------------VGSETPEAV 161
Query: 235 AIEALEQIEGFLKEE 249
+ +E+++ +K++
Sbjct: 162 GMRVIEELQKVVKKD 176
>gi|443478875|ref|ZP_21068568.1| shikimate kinase [Pseudanabaena biceps PCC 7429]
gi|443015775|gb|ELS30595.1| shikimate kinase [Pseudanabaena biceps PCC 7429]
Length = 185
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L+G I+LVGMMG+GK+T+GK+L+ L Y+F D D LIEQ G S+ +IF GE FR
Sbjct: 2 LNGTNIFLVGMMGAGKSTIGKLLAQKLSYNFVDTDPLIEQCA-GKSITDIFTHDGEDLFR 60
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E +VL ++S +LVV+TGGG V R +NW ++ GI VW+DVP++ L +R+ A +++
Sbjct: 61 DLEQQVLSQVSSYTRLVVATGGGIVLRSLNWSHLHDGIVVWIDVPVDVLHERLKA-ESEN 119
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLE 215
RPLL Q E+ L +L+ ++E+R + YA A+ + ++
Sbjct: 120 RPLL-QTEN------PLQKLTDIYEQRRDRYAQADISIMVD 153
>gi|86609195|ref|YP_477957.1| shikimate kinase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|115312166|sp|Q2JKT7.1|AROK_SYNJB RecName: Full=Shikimate kinase; Short=SK
gi|86557737|gb|ABD02694.1| shikimate kinase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 187
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 101/162 (62%), Gaps = 9/162 (5%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMGSGK+TVG L+ L + FFD D L+EQ V G+S+A+IF +GE +FR
Sbjct: 10 LRGVNVYLIGMMGSGKSTVGSELAAQLRFQFFDTDGLVEQ-VGGSSIAQIFAEHGEAYFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ ET+VL +LS +LV++TGGG V RP NW Y+ G++VWLDV E + QR+
Sbjct: 69 DLETQVLAQLSSYTRLVIATGGGIVLRPKNWSYLHHGLTVWLDVAPELIWQRLKR-DPGQ 127
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
RPLL + A L L +ER YA A+ RV + +
Sbjct: 128 RPLLQTPDPQAA-------LYKLMQEREPFYAQADVRVPIRS 162
>gi|302830073|ref|XP_002946603.1| hypothetical protein VOLCADRAFT_86714 [Volvox carteri f.
nagariensis]
gi|300268349|gb|EFJ52530.1| hypothetical protein VOLCADRAFT_86714 [Volvox carteri f.
nagariensis]
Length = 352
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
+K + E+ L G I+L+GMMGSGK+TVGK+LS L Y+FFD D++IE + D V++
Sbjct: 95 VKEVTDELTKDLRGCNIWLIGMMGSGKSTVGKMLSNTLKYAFFDTDSVIELAHDKKPVSQ 154
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEAL 163
IF G+ +FR E++++++LS R LV++TGGGAV RP NW YM GI WL+ ++ L
Sbjct: 155 IFAEEGQEYFRNCESQIIKELSPYRNLVIATGGGAVLRPENWGYMHLGIVCWLNGDVDLL 214
Query: 164 AQRIAAVGTDSRPLLHQCESGDAYTE--------ALNRLSTLWEERGEAYANANARVSLE 215
A+R+ G + RPLL + D A ++L+ L E+R Y NA+ V+LE
Sbjct: 215 ARRVVRDGLEKRPLLAAASAADGGGAEGGGALGVARDKLAALQEQRRRYYENADVVVTLE 274
>gi|148241390|ref|YP_001226547.1| shikimate kinase [Synechococcus sp. RCC307]
gi|254806784|sp|A5GQN5.1|AROK_SYNR3 RecName: Full=Shikimate kinase; Short=SK
gi|147849700|emb|CAK27194.1| Shikimate kinase [Synechococcus sp. RCC307]
Length = 195
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 115/202 (56%), Gaps = 21/202 (10%)
Query: 46 NKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIF 105
+ SQ + L G +YLVGMMGSGK+TVG +L+ LGY F D D +I Q+ G S+ EIF
Sbjct: 5 DPSQPLGERLQGTNLYLVGMMGSGKSTVGPLLAKALGYRFLDADAVISQAA-GCSIPEIF 63
Query: 106 KLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQ 165
+ GE FR+ E +VLQ+LS LVV+TGGG VT P NW +++G+ +WLDV E L +
Sbjct: 64 ERDGEEGFRQLERQVLQQLSQWHSLVVATGGGIVTVPANWGELRQGVVIWLDVAEEELMR 123
Query: 166 RIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKD 225
R+ A RPLL +GD + RL L E+R Y A+ RVS A G D
Sbjct: 124 RLQA-DPGGRPLL----AGD---DPAGRLHGLLEKRQPLYGQADLRVS----AQGEGASD 171
Query: 226 VSSLTPVTIAIEALEQIEGFLK 247
+S L+Q+ G LK
Sbjct: 172 ISE--------RILQQLPGLLK 185
>gi|297818234|ref|XP_002877000.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297322838|gb|EFH53259.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 280
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 14/211 (6%)
Query: 37 PIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSV 96
PID V+K K+ +I P L G I+LVG+ S KT GK+L+ L Y +FD D LI ++
Sbjct: 72 PID---VVKRKAMDIAPELKGASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAA 128
Query: 97 DGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWL 156
G A+ K E F+E ETEVL++LS M +LVV G GAV N ++ GIS+W+
Sbjct: 129 GGNVSAQALKEADEKAFQESETEVLKQLSSMGRLVVCAGDGAVQSLTNLALLRHGISIWI 188
Query: 157 DVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
DVPL+ IAA G D + + E + L +E+ + Y A+A +SLE
Sbjct: 189 DVPLD-----IAAKGDD------DSFNSEPSPELFDTLKASYEKSRKGYETADASISLEK 237
Query: 217 IAVKLGHKDVSSLTPVTIAIEALEQIEGFLK 247
IA KL +D+ ++ IA+E L++IE +
Sbjct: 238 IATKLEFEDLEAVASEDIALEVLKEIEKLTR 268
>gi|428306365|ref|YP_007143190.1| shikimate kinase [Crinalium epipsammum PCC 9333]
gi|428247900|gb|AFZ13680.1| shikimate kinase [Crinalium epipsammum PCC 9333]
Length = 184
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 101/160 (63%), Gaps = 10/160 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L+G +YL+GMMG+GKTTVG+ LS LGY FFD DTLIEQ V ++ +IF GE FR
Sbjct: 2 LNGVNVYLIGMMGAGKTTVGRELSNQLGYRFFDTDTLIEQ-VASQTITQIFTDTGEEGFR 60
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL ++S +L ++TGGG V + NW Y+ G+ VWLD P+E L +R+A ++
Sbjct: 61 KLESQVLSEISAYTKLAIATGGGIVLKRENWSYLHHGLIVWLDAPVELLIERLAQ--DNT 118
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
RPLL + +L L E+R YA A+ ++S+
Sbjct: 119 RPLLQDVNPAE-------KLQKLLEQRQRLYAQADIKISI 151
>gi|428319260|ref|YP_007117142.1| shikimate kinase [Oscillatoria nigro-viridis PCC 7112]
gi|428242940|gb|AFZ08726.1| shikimate kinase [Oscillatoria nigro-viridis PCC 7112]
Length = 183
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 99/158 (62%), Gaps = 10/158 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G IYLVGMMG+GKTTVG+IL+ L Y FFD D LI + V S+AEIF GE FR
Sbjct: 4 LRGVNIYLVGMMGAGKTTVGRILAKKLKYRFFDTDELIVR-VTNQSIAEIFDREGEEAFR 62
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +LS + VV+TGGG VTR +NW Y+ G+ VWLDVP++ L R+ + +
Sbjct: 63 ELETKVLGELSAYKNSVVATGGGIVTRSMNWGYLHYGVVVWLDVPVDQLYDRLRS--DTA 120
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
RPLL + E ++L +L ER Y A+ RV
Sbjct: 121 RPLLQEG-------EIKSKLQSLLNERERLYTQADVRV 151
>gi|425444946|ref|ZP_18824986.1| Shikimate kinase [Microcystis aeruginosa PCC 9443]
gi|389735150|emb|CCI01281.1| Shikimate kinase [Microcystis aeruginosa PCC 9443]
Length = 190
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 106/163 (65%), Gaps = 10/163 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++L+GMMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GEG FR
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEGTFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +LS + + V++TGGG V +PINW Y++ G+ +WLDVPLE L +R+ S
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPINWSYLRHGLMIWLDVPLEVLVKRLKQ--DTS 126
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
RPLL T+ ++L L E+R YA A+ R+ + ++
Sbjct: 127 RPLLES-------TDLESKLELLLEQRRGLYAEADLRIVVSDL 162
>gi|291569159|dbj|BAI91431.1| shikimate kinase [Arthrospira platensis NIES-39]
Length = 184
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 96/160 (60%), Gaps = 10/160 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ G IYL+GMMG+GK+TVG+IL+ L Y FFD D LI Q V G ++ EIF GE FR
Sbjct: 6 IQGINIYLIGMMGAGKSTVGEILANRLSYKFFDTDVLISQ-VSGQAIPEIFSTQGEEEFR 64
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E++VL L + LVV+TGGG V + +NW Y++ GI VWLDVP L +R+ G +
Sbjct: 65 NLESQVLSSLCAYQHLVVATGGGVVIKRMNWSYLRHGIIVWLDVPTHCLYERLK--GDTT 122
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
RPLL + + L RL + E R Y A+ +++
Sbjct: 123 RPLLQ-------HPDPLTRLDNILETRRHLYQQADISITI 155
>gi|356498875|ref|XP_003518273.1| PREDICTED: shikimate kinase, chloroplastic [Glycine max]
Length = 280
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 122/209 (58%), Gaps = 2/209 (0%)
Query: 39 DEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDG 98
D + +K K+ E+ L G I+LVG+ S KT++GK+L+ L Y +FD D+L+E++V G
Sbjct: 62 DSSLAVKKKAAEVSSELKGTSIFLVGLKSSLKTSLGKLLADALRYYYFDSDSLVEEAVGG 121
Query: 99 TSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDV 158
A+ F+ E F E ETEVL++LS M +LVV G G VT N ++ GIS+W+DV
Sbjct: 122 ALAAKSFRESDEKGFYESETEVLKQLSSMGRLVVCAGNGTVTSSTNLALLRHGISLWIDV 181
Query: 159 PLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
PL+ +A+ + + P + +Y E + L L+++ YA A+A +S++ +
Sbjct: 182 PLDFVARDVIEDKSQFAP--SEISISGSYPEVQDELGALYDKYRVGYATADAIISVQKVV 239
Query: 219 VKLGHKDVSSLTPVTIAIEALEQIEGFLK 247
+LG ++ +T +A+EAL +IE +
Sbjct: 240 SRLGCDNLDEITREDMALEALREIEKLTR 268
>gi|209527294|ref|ZP_03275804.1| Shikimate kinase [Arthrospira maxima CS-328]
gi|423066193|ref|ZP_17054983.1| shikimate kinase [Arthrospira platensis C1]
gi|209492282|gb|EDZ92627.1| Shikimate kinase [Arthrospira maxima CS-328]
gi|406712235|gb|EKD07424.1| shikimate kinase [Arthrospira platensis C1]
Length = 194
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 96/160 (60%), Gaps = 10/160 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ G IYL+GMMG+GK+TVG+IL+ L Y FFD D LI Q V G ++ EIF GE FR
Sbjct: 16 IQGINIYLIGMMGAGKSTVGQILANRLSYKFFDTDVLISQ-VAGQAIPEIFATQGEEEFR 74
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E++VL L + LVV+TGGG V + +NW Y++ GI VWLDVP L +R+ G +
Sbjct: 75 NLESQVLSSLCAYQHLVVATGGGVVIKRMNWSYLRHGIIVWLDVPTHCLYERLK--GDTT 132
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
RPLL + + L RL + E R Y A+ +++
Sbjct: 133 RPLLQ-------HPDPLTRLDNILETRRHLYQQADISIAI 165
>gi|409989186|ref|ZP_11272878.1| shikimate kinase [Arthrospira platensis str. Paraca]
gi|409939933|gb|EKN80923.1| shikimate kinase [Arthrospira platensis str. Paraca]
Length = 204
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 96/160 (60%), Gaps = 10/160 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ G IYL+GMMG+GK+TVG+IL+ L Y FFD D LI Q V G ++ EIF GE FR
Sbjct: 26 IQGINIYLIGMMGAGKSTVGEILANRLSYKFFDTDVLISQ-VSGQAIPEIFSTQGEEEFR 84
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E++VL L + LVV+TGGG V + +NW Y++ GI VWLDVP L +R+ G +
Sbjct: 85 NLESQVLSSLCAYQHLVVATGGGVVIKRMNWSYLRHGIIVWLDVPTHCLYERLK--GDTT 142
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
RPLL + + L RL + E R Y A+ +++
Sbjct: 143 RPLLQ-------HPDPLTRLDNILETRRHLYQQADISITI 175
>gi|434393629|ref|YP_007128576.1| shikimate kinase [Gloeocapsa sp. PCC 7428]
gi|428265470|gb|AFZ31416.1| shikimate kinase [Gloeocapsa sp. PCC 7428]
Length = 190
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 114/203 (56%), Gaps = 21/203 (10%)
Query: 46 NKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIF 105
N S L G +YLVGMMG+GKTTVG+ L+ LGY F D D +I Q V S++E+F
Sbjct: 2 NTSDRQSNVLKGVNLYLVGMMGTGKTTVGRALATKLGYRFVDTDEIITQ-VTQQSISEVF 60
Query: 106 KLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQ 165
GE FR+ ET+VL K+ L ++TGGG V + NW Y+ G+ VWLD P E L+
Sbjct: 61 ATSGEAAFRQIETQVLAKVCAYTHLAIATGGGIVLQRENWSYLHHGLIVWLDAPTELLST 120
Query: 166 RIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKD 225
R++A D+RPLL ++GD ++ L T+ ++R Y+ A+ RV +
Sbjct: 121 RLSA--DDTRPLL---QTGDLRSQ----LETILQQRQPLYSQADLRVVV----------- 160
Query: 226 VSSLTPVTIAIEALEQIEGFLKE 248
S TP +A L++I LK+
Sbjct: 161 TSEETPEQLATRILQEIPQVLKQ 183
>gi|148240549|ref|YP_001225936.1| shikimate kinase [Synechococcus sp. WH 7803]
gi|147849088|emb|CAK24639.1| Shikimate kinase [Synechococcus sp. WH 7803]
Length = 191
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 99/161 (61%), Gaps = 9/161 (5%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L GR +YLVGMMGSGKT+ G+ L+ L Y F D D +IEQ+ G ++ +IFK GE FR
Sbjct: 12 LGGRNLYLVGMMGSGKTSTGRPLAQRLEYGFVDADAVIEQAA-GCTIPDIFKREGESGFR 70
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
ET+VL +S LVV+TGGGAVTRP NW M +GI +WLDV + L +R+ + T
Sbjct: 71 NLETQVLSAISQRHSLVVATGGGAVTRPENWGAMHQGIVIWLDVEQQRLLKRLESDDT-P 129
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLE 215
RPLLH+ + A L+TL R YA A+ V ++
Sbjct: 130 RPLLHEQDPALA-------LNTLLTARRPMYAEADLTVVID 163
>gi|16329403|ref|NP_440131.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|383321144|ref|YP_005381997.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383324314|ref|YP_005385167.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490198|ref|YP_005407874.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384435464|ref|YP_005650188.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|451813562|ref|YP_007450014.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|2492976|sp|P72796.1|AROK_SYNY3 RecName: Full=Shikimate kinase; Short=SK
gi|1651884|dbj|BAA16811.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|339272496|dbj|BAK48983.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|359270463|dbj|BAL27982.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359273634|dbj|BAL31152.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359276804|dbj|BAL34321.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407957278|dbj|BAM50518.1| shikimate kinase [Bacillus subtilis BEST7613]
gi|451779531|gb|AGF50500.1| shikimate kinase [Synechocystis sp. PCC 6803]
Length = 189
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 113/199 (56%), Gaps = 21/199 (10%)
Query: 51 IEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGE 110
I+ L G ++L+GMMGSGK+TVG +L+ LGY FFD D LIE+ V G ++A+IF GE
Sbjct: 6 IKEQLQGVNLFLIGMMGSGKSTVGPLLAEQLGYRFFDADVLIER-VAGKAIADIFAEDGE 64
Query: 111 GFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAV 170
FR+ ETEVL L+ + V++TGGG V R NW Y+ G+ +WLD LE L R+
Sbjct: 65 DTFRDLETEVLGHLAAQTRSVIATGGGVVLRRQNWSYLHHGLVIWLDGSLELLLARLQ-- 122
Query: 171 GTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLT 230
G ++RPLL Q E+ + RL L +R YA A+ R L+ +
Sbjct: 123 GDEARPLL-QVENLE------ERLGNLLAQRQPLYAQADLRFPLQ-----------ADQD 164
Query: 231 PVTIAIEALEQIEGFLKEE 249
P+ IA E L I G LK +
Sbjct: 165 PLAIAGELLATIPGLLKPQ 183
>gi|30688547|ref|NP_189325.2| shikimate kinase like 1 [Arabidopsis thaliana]
gi|186510473|ref|NP_001118711.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|186510475|ref|NP_001118712.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|75274423|sp|Q9LW20.1|SKL1_ARATH RecName: Full=Probable inactive shikimate kinase like 1,
chloroplastic; Short=AtSKL1; Flags: Precursor
gi|9279680|dbj|BAB01237.1| unnamed protein product [Arabidopsis thaliana]
gi|45752658|gb|AAS76227.1| At3g26900 [Arabidopsis thaliana]
gi|46402442|gb|AAS92323.1| At3g26900 [Arabidopsis thaliana]
gi|227202866|dbj|BAH56906.1| AT3G26900 [Arabidopsis thaliana]
gi|332643714|gb|AEE77235.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|332643715|gb|AEE77236.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|332643716|gb|AEE77237.1| shikimate kinase like 1 [Arabidopsis thaliana]
Length = 280
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 117/211 (55%), Gaps = 14/211 (6%)
Query: 37 PIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSV 96
PID V+K K+ +I P L G I+LVG+ S KT GK+L+ L Y +FD D LI ++
Sbjct: 72 PID---VVKRKAMDIAPELKGASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAA 128
Query: 97 DGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWL 156
G A+ K E F+E ETEVL++LS M +LVV G GAV N ++ GIS+W+
Sbjct: 129 GGNVSAQALKEADEKAFQESETEVLKQLSSMGRLVVCAGDGAVQSLRNLALLRHGISIWI 188
Query: 157 DVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
DVPL+ I A G D H + E + L +E+ + Y A+ +SLE
Sbjct: 189 DVPLD-----ITAKGDDDS--FH----SEPSPELFDTLKASYEKSRKGYETADVSISLEK 237
Query: 217 IAVKLGHKDVSSLTPVTIAIEALEQIEGFLK 247
IA KL +D+ ++T IA+E L++IE +
Sbjct: 238 IATKLEFEDLEAVTSEDIALEILKEIEKLTR 268
>gi|425455716|ref|ZP_18835429.1| Shikimate kinase [Microcystis aeruginosa PCC 9807]
gi|389803372|emb|CCI17712.1| Shikimate kinase [Microcystis aeruginosa PCC 9807]
Length = 190
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 105/163 (64%), Gaps = 10/163 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++L+GMMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FR
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +LS + + V++TGGG V +PINW Y++ G+ +WLDVPLE L +R+ S
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPINWSYLRHGLMIWLDVPLEVLVKRLKQ--DTS 126
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
RPLL T+ ++L L E+R YA A+ R+ + ++
Sbjct: 127 RPLLES-------TDLESKLELLLEQRRGLYAEADLRIVVSDL 162
>gi|443653401|ref|ZP_21131078.1| shikimate kinase family protein [Microcystis aeruginosa DIANCHI905]
gi|159030194|emb|CAO91086.1| aroK [Microcystis aeruginosa PCC 7806]
gi|443334040|gb|ELS48570.1| shikimate kinase family protein [Microcystis aeruginosa DIANCHI905]
Length = 190
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 105/163 (64%), Gaps = 10/163 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++L+GMMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FR
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +LS + + V++TGGG V +PINW Y++ G+ +WLDVPLE L +R+ S
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPINWSYLRHGLMIWLDVPLEVLVKRLKQ--DTS 126
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
RPLL T+ ++L L E+R YA A+ R+ + ++
Sbjct: 127 RPLLES-------TDLESKLELLLEQRRGLYAEADLRIFVSDL 162
>gi|376003244|ref|ZP_09781058.1| shikimate kinase I [Arthrospira sp. PCC 8005]
gi|375328404|emb|CCE16811.1| shikimate kinase I [Arthrospira sp. PCC 8005]
Length = 194
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 95/160 (59%), Gaps = 10/160 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ G IYL+GMMG+GK+TVG+IL+ L Y FFD D LI Q V G ++ EIF GE FR
Sbjct: 16 IQGINIYLIGMMGAGKSTVGQILANRLSYKFFDTDVLISQ-VAGQAIPEIFATQGEEEFR 74
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E++VL L + LVV+TGGG V + NW Y++ GI VWLDVP L +R+ G +
Sbjct: 75 NLESQVLSSLCAYQHLVVATGGGVVIKRTNWSYLRHGIIVWLDVPTHCLYERLK--GDTT 132
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
RPLL + + L RL + E R Y A+ +++
Sbjct: 133 RPLLQ-------HPDPLTRLDNILETRRHLYQQADIYIAI 165
>gi|428209800|ref|YP_007094153.1| shikimate kinase [Chroococcidiopsis thermalis PCC 7203]
gi|428011721|gb|AFY90284.1| shikimate kinase [Chroococcidiopsis thermalis PCC 7203]
Length = 185
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 108/193 (55%), Gaps = 21/193 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YLVGMMG+GKTT+GKIL+ LGY F D D +IEQ + S+ +IF GE FR
Sbjct: 7 LKGINLYLVGMMGAGKTTIGKILAAQLGYGFVDTDAVIEQ-LTQKSINQIFAEKGETTFR 65
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ ET+VL ++ +L +STGGG V R NW Y+ G+ VWLDVP+E L R+A ++
Sbjct: 66 QIETKVLSEVCAYTRLAISTGGGIVLRRENWSYLHYGLIVWLDVPVEQLYSRLAE--DNT 123
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL + + +L +L +ER YA A+ ++ TP I
Sbjct: 124 RPLLQD-------PDPIGKLRSLLDERRSLYAEADLHITPH-----------PQDTPNAI 165
Query: 235 AIEALEQIEGFLK 247
A + LE I LK
Sbjct: 166 AAQVLEAIPSVLK 178
>gi|425467327|ref|ZP_18846610.1| Shikimate kinase [Microcystis aeruginosa PCC 9809]
gi|389829918|emb|CCI28391.1| Shikimate kinase [Microcystis aeruginosa PCC 9809]
Length = 190
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 105/163 (64%), Gaps = 10/163 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++L+GMMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FR
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +LS + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ S
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEILVKRLKQ--DTS 126
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
RPLL T+ ++L L E+R YA A+ R+ + ++
Sbjct: 127 RPLLQS-------TDLESKLELLLEQRRGLYAEADLRIVVSDL 162
>gi|425472135|ref|ZP_18850986.1| Shikimate kinase [Microcystis aeruginosa PCC 9701]
gi|389881854|emb|CCI37641.1| Shikimate kinase [Microcystis aeruginosa PCC 9701]
Length = 190
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 105/163 (64%), Gaps = 10/163 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++L+GMMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FR
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFVDEGEATFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +LS + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ S
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEVLVKRLKQ--DTS 126
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
RPLL T+ ++L L E+R YA A+ R+ + ++
Sbjct: 127 RPLLQS-------TDLESKLELLLEQRRGLYAEADIRIVVSDL 162
>gi|422302513|ref|ZP_16389875.1| Shikimate kinase [Microcystis aeruginosa PCC 9806]
gi|389788246|emb|CCI16208.1| Shikimate kinase [Microcystis aeruginosa PCC 9806]
Length = 190
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 88/128 (68%), Gaps = 3/128 (2%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++L+GMMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FR
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +LS + + V++TGGG V +PINW Y++ G+ +WLDVPLE L +R+ S
Sbjct: 69 ELETQVLVELSSLTKTVIATGGGMVLKPINWSYLRHGLMIWLDVPLEVLVKRLKQ--DTS 126
Query: 175 RPLLHQCE 182
RPLL +
Sbjct: 127 RPLLESTD 134
>gi|425438084|ref|ZP_18818493.1| Shikimate kinase [Microcystis aeruginosa PCC 9432]
gi|389676823|emb|CCH94217.1| Shikimate kinase [Microcystis aeruginosa PCC 9432]
Length = 190
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 102/158 (64%), Gaps = 10/158 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++L+GMMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FR
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +LS + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ S
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEVLVKRLKQ--DTS 126
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
RPLL T+ ++L L E+R YA A+ R+
Sbjct: 127 RPLLQS-------TDLESKLELLLEQRRGLYAEADLRI 157
>gi|384246912|gb|EIE20400.1| SKI-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 235
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 107/176 (60%), Gaps = 6/176 (3%)
Query: 45 KNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEI 104
K + E+ L G +YLVGMMGSGK+TVGKIL+ L Y + DCDTLIE+ + G SVAEI
Sbjct: 26 KALAAEVMELLEGTSLYLVGMMGSGKSTVGKILASALKYPYLDCDTLIEK-MAGCSVAEI 84
Query: 105 FKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALA 164
F GE FRE E++VL +L + +VVSTGGG V NW YMQ G+ +WL P E L+
Sbjct: 85 FSEEGEESFRELESQVLHELMPFKAVVVSTGGGVVVSKQNWGYMQHGVVIWLTGPPELLS 144
Query: 165 QRIAAVGTDSRPLLHQCESG-----DAYTEALNRLSTLWEERGEAYANANARVSLE 215
+R GT SRPLL Q +G D Y + +L + ++R Y A+ + LE
Sbjct: 145 RRALRDGTQSRPLLSQSSAGSDEGDDEYAATVAKLQDILDKRRHMYEQADLHIPLE 200
>gi|425442960|ref|ZP_18823194.1| Shikimate kinase [Microcystis aeruginosa PCC 9717]
gi|389715849|emb|CCH99842.1| Shikimate kinase [Microcystis aeruginosa PCC 9717]
Length = 190
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 105/163 (64%), Gaps = 10/163 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++L+GMMG+GK+T+G++LS L Y FFD D LIE+ V G + EIF GE FR
Sbjct: 10 LRGLSVFLLGMMGAGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +LS + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ S
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEVLVKRLKK--DTS 126
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
RPLL T+ ++L L E+R YA A+ R+ + ++
Sbjct: 127 RPLLQS-------TDLESKLELLLEQRRGLYAEADLRIVVSDL 162
>gi|260435091|ref|ZP_05789061.1| shikimate kinase [Synechococcus sp. WH 8109]
gi|260412965|gb|EEX06261.1| shikimate kinase [Synechococcus sp. WH 8109]
Length = 191
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 100/173 (57%), Gaps = 9/173 (5%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
+ + + ++ L+GR IYLVGMMGSGKT+ G+ L+ LGY F D D +IEQ+ G S+ E
Sbjct: 1 MADSTPTLKERLAGRSIYLVGMMGSGKTSTGRPLAERLGYGFVDADAVIEQAA-GCSIPE 59
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEAL 163
IF GE FR E++VL +S LVV+TGGG VT+P NW + GI +WLDV + L
Sbjct: 60 IFDRDGEAGFRSLESQVLSAISQRHSLVVATGGGVVTQPENWGMLHSGIVIWLDVVPDQL 119
Query: 164 AQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
QR+ A T RPLL + A LN ER YA A+ V + +
Sbjct: 120 LQRLNADST-VRPLLQTADPEAALKALLN-------ERRPLYAEADLTVVIND 164
>gi|67922250|ref|ZP_00515764.1| Shikimate kinase [Crocosphaera watsonii WH 8501]
gi|416389334|ref|ZP_11685333.1| Shikimate kinase I (AroE I) [Crocosphaera watsonii WH 0003]
gi|67855953|gb|EAM51198.1| Shikimate kinase [Crocosphaera watsonii WH 8501]
gi|357264243|gb|EHJ13156.1| Shikimate kinase I (AroE I) [Crocosphaera watsonii WH 0003]
Length = 188
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 103/165 (62%), Gaps = 10/165 (6%)
Query: 51 IEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGE 110
++ L G ++LVGMMG+GKTTVG+ L+ L Y FFD D L+E+ V G ++ +IF GE
Sbjct: 3 MQQLLQGVNVFLVGMMGTGKTTVGQNLAQRLNYRFFDSDVLVEK-VTGQTINDIFATQGE 61
Query: 111 GFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAV 170
FR+ ET+VL +L+ + V++TGGG+V +P NW Y+ G+ VWLDV L L QR+A
Sbjct: 62 ETFRQLETQVLSELASCTKSVIATGGGSVLKPKNWSYLHHGLIVWLDVSLPILTQRLAKD 121
Query: 171 GTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLE 215
T RPLL T+ +L +L E+R YA ++ R+ ++
Sbjct: 122 TT--RPLLQ-------TTDLSLKLQSLSEQRNPLYAQSDLRIIID 157
>gi|443324667|ref|ZP_21053405.1| shikimate kinase [Xenococcus sp. PCC 7305]
gi|442795735|gb|ELS05084.1| shikimate kinase [Xenococcus sp. PCC 7305]
Length = 187
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 109/192 (56%), Gaps = 27/192 (14%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMGSGK+T+GKIL+ L Y FFD D LIE+ V ++ EIF GE +FR
Sbjct: 18 LKGVNVYLIGMMGSGKSTIGKILAQKLNYRFFDTDVLIEK-VAQKTIPEIFATEGEAYFR 76
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ ET+VL ++S V++TGGG + + +NW ++++G+ VWLD L+ L +R+A +
Sbjct: 77 DLETKVLHEVSAYNHSVIATGGGMIQKTVNWSFLRQGLIVWLDADLDVLLERVAK--DTN 134
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPL +L +L E+R YA A+ R+ + I TP +
Sbjct: 135 RPL-------------AGKLQSLLEKRSSLYAQADLRIVSDRIK-----------TPKQV 170
Query: 235 AIEALEQIEGFL 246
A E +++I L
Sbjct: 171 ASEIIDKIPSKL 182
>gi|440755112|ref|ZP_20934314.1| shikimate kinase family protein [Microcystis aeruginosa TAIHU98]
gi|440175318|gb|ELP54687.1| shikimate kinase family protein [Microcystis aeruginosa TAIHU98]
Length = 190
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 102/158 (64%), Gaps = 10/158 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++L+GMMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FR
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +LS + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ S
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEILVKRLKQ--DTS 126
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
RPLL T+ ++L L E+R YA A+ R+
Sbjct: 127 RPLLES-------TDLESKLELLLEQRRGLYAEADLRI 157
>gi|255087652|ref|XP_002505749.1| predicted protein [Micromonas sp. RCC299]
gi|226521019|gb|ACO67007.1| predicted protein [Micromonas sp. RCC299]
Length = 269
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 103/167 (61%), Gaps = 3/167 (1%)
Query: 48 SQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKL 107
++E++ L G ++LVGMMG+GK++VGK L+ LGYSFFD D +IEQ V T++ EIF
Sbjct: 54 AKEVKEALDGSSLFLVGMMGTGKSSVGKKLAASLGYSFFDTDEVIEQ-VTKTTIPEIFAE 112
Query: 108 YGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRI 167
GE FRE ET+VL +++ ++ VV+TGGG V + NW +++ G+ + L LA RI
Sbjct: 113 SGEDGFREIETQVLAEIAAYKKCVVATGGGVVKKKANWMHLRNGVVLCLTGTPTLLAARI 172
Query: 168 AAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
G ++RPL GD ++ + +ER YANA+ +V L
Sbjct: 173 TRDGAETRPLFKDV--GDDVDAIAAKVEEMMKERAPMYANADVQVRL 217
>gi|78213853|ref|YP_382632.1| shikimate kinase [Synechococcus sp. CC9605]
gi|124053406|sp|Q3AH55.1|AROK_SYNSC RecName: Full=Shikimate kinase; Short=SK
gi|78198312|gb|ABB36077.1| Shikimate kinase [Synechococcus sp. CC9605]
Length = 199
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 42 QVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSV 101
+V+ + + ++ LSGR +YLVGMMGSGKT+ G+ L+ LGY F D D +IEQ+ G S+
Sbjct: 7 RVMADSTPTLKKRLSGRSLYLVGMMGSGKTSTGRPLAERLGYGFVDADAVIEQAA-GCSI 65
Query: 102 AEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLE 161
EIF+ G+ FR E++VL +S LVV+TGGG VT+P NW + GI +WLDV +
Sbjct: 66 PEIFERDGDAGFRSLESQVLSAISQRHSLVVATGGGVVTQPENWGLLHSGIVIWLDVVPD 125
Query: 162 ALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEE 200
L QR+ A T RPLL + + LN L+ E
Sbjct: 126 QLLQRLNADST-VRPLLQTTDPEASLNALLNERRPLYSE 163
>gi|425452721|ref|ZP_18832536.1| Shikimate kinase [Microcystis aeruginosa PCC 7941]
gi|389765347|emb|CCI08717.1| Shikimate kinase [Microcystis aeruginosa PCC 7941]
Length = 190
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 102/158 (64%), Gaps = 10/158 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++L+GMMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FR
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +LS + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ S
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEILVKRLKQ--DTS 126
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
RPLL T+ ++L L E+R YA A+ R+
Sbjct: 127 RPLLES-------TDLESKLELLLEQRRGLYAEADLRI 157
>gi|307155208|ref|YP_003890592.1| shikimate kinase [Cyanothece sp. PCC 7822]
gi|306985436|gb|ADN17317.1| Shikimate kinase [Cyanothece sp. PCC 7822]
Length = 183
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 110/193 (56%), Gaps = 21/193 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G I+L+GM G+GKTTVG++L+ LGY FFD D LIE+ V G +V EIF GE FR
Sbjct: 6 LKGVSIFLIGMPGTGKTTVGELLAEKLGYRFFDSDVLIER-VSGNTVNEIFNTLGEEAFR 64
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL +L + +++TGGG V + +NW Y++ G+ +WLD P++ L QR+ T
Sbjct: 65 KIESQVLSELCSYTKSIIATGGGIVIKQMNWSYLRHGLIIWLDSPVDLLIQRLKEDST-- 122
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL + +L +LW +R Y A+ ++S+ H+ TP I
Sbjct: 123 RPLLRDVDLE-------QKLQSLWTQRRPLYKQADLQISITE------HQ-----TPEQI 164
Query: 235 AIEALEQIEGFLK 247
+ L QI LK
Sbjct: 165 VSQILAQIPSILK 177
>gi|78183927|ref|YP_376362.1| shikimate kinase [Synechococcus sp. CC9902]
gi|124053405|sp|Q3B009.1|AROK_SYNS9 RecName: Full=Shikimate kinase; Short=SK
gi|78168221|gb|ABB25318.1| shikimate kinase [Synechococcus sp. CC9902]
Length = 191
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 96/162 (59%), Gaps = 9/162 (5%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
LSGR IYL+GMMGSGKT+ G+ L+ LGY F D D +IEQ V G ++ EIF+ GE FR
Sbjct: 12 LSGRSIYLIGMMGSGKTSTGRPLAKRLGYGFVDADAVIEQ-VAGCTIPEIFERDGEAGFR 70
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E++VL +S LVV+TGGG VT+P NW + GI VWLDV L +R+ T
Sbjct: 71 SIESQVLNAISQRHSLVVATGGGVVTKPENWGQLHSGIVVWLDVNRAQLIERLRDDST-Q 129
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
RPLL Q A L TL +ER Y A+ V +++
Sbjct: 130 RPLLQQPNPEAA-------LDTLLQERRPLYGEADLTVVIKD 164
>gi|425459812|ref|ZP_18839298.1| Shikimate kinase [Microcystis aeruginosa PCC 9808]
gi|389827663|emb|CCI20915.1| Shikimate kinase [Microcystis aeruginosa PCC 9808]
Length = 190
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 102/158 (64%), Gaps = 10/158 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++L+GMMG+GK+T+G++LS L Y FFD D LIE+ V G + EIF GE FR
Sbjct: 10 LRGLSVFLLGMMGAGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +LS + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ S
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEVLVKRLKQ--DTS 126
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
RPLL T+ ++L L E+R YA A+ R+
Sbjct: 127 RPLLQS-------TDLESKLELLLEQRRGLYAEADLRI 157
>gi|428779039|ref|YP_007170825.1| shikimate kinase [Dactylococcopsis salina PCC 8305]
gi|428693318|gb|AFZ49468.1| shikimate kinase [Dactylococcopsis salina PCC 8305]
Length = 186
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 115/198 (58%), Gaps = 23/198 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G IYLVG+MG GKT VGK ++ L Y FFD D LI + V+G ++ +IF GE +FR
Sbjct: 10 LQGLNIYLVGLMGVGKTAVGKEIAQQLNYRFFDTDDLIIR-VEGKAITDIFAQKGETYFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VLQ+LS+ + V++TGGG + + NW ++Q+G+ VWLD + + +R+A ++
Sbjct: 69 ELETKVLQELSVCTRSVIATGGGIIMKKENWSFLQQGLVVWLDAKTDLIMERLAE--DNT 126
Query: 175 RPLLHQCESGDAYTEALNR-LSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
RPLL TE + L LW +R YA ++ ++S+E S +P
Sbjct: 127 RPLLK--------TENPKQTLDDLWWKRRSRYAQSDLQISIER-----------SQSPSE 167
Query: 234 IAIEALEQIEGFLKEEDD 251
IA E L QI +K+ D
Sbjct: 168 IASEVLMQIPEVIKQASD 185
>gi|443313787|ref|ZP_21043397.1| shikimate kinase [Synechocystis sp. PCC 7509]
gi|442776200|gb|ELR86483.1| shikimate kinase [Synechocystis sp. PCC 7509]
Length = 188
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 111/179 (62%), Gaps = 13/179 (7%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMGSGKTT+G +++ LGY F D D +IEQ V S++++F GE FR
Sbjct: 10 LKGVNLYLIGMMGSGKTTIGSLIATELGYGFVDTDAVIEQ-VTKHSISQLFAEVGEAEFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL ++ LVVSTGGG VT+ NW Y+ G+ VWLDVP++ L +R+ ++
Sbjct: 69 QIESQVLAEVCAYTNLVVSTGGGIVTQQKNWSYLHYGLIVWLDVPIKVLYERLKE--DNT 126
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAY--ANANARVSLENIAVKLGHKDVSSLTP 231
RPLL + L +L +++E+R Y A+ + RVS E A ++ ++ V +L P
Sbjct: 127 RPLLQAA-------DPLGKLQSIFEQRQPLYNQADLHIRVSEEETASQIANR-VIALIP 177
>gi|126657832|ref|ZP_01728985.1| shikimate kinase [Cyanothece sp. CCY0110]
gi|126620772|gb|EAZ91488.1| shikimate kinase [Cyanothece sp. CCY0110]
Length = 188
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 100/164 (60%), Gaps = 10/164 (6%)
Query: 52 EPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEG 111
E L G ++L+GMMG+GKTTVGK L+ L Y FFD D LIE+ V S+ IF GE
Sbjct: 4 ENLLQGVNVFLIGMMGTGKTTVGKKLAQRLNYRFFDTDVLIEK-VTKQSITNIFATQGEE 62
Query: 112 FFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVG 171
FR+ E++VL +LS + V++TGGG V + INW Y+ G+ +WLD P+ L +R+A
Sbjct: 63 TFRDLESQVLSELSSCTKSVIATGGGIVLKSINWSYLHHGLIIWLDAPVSVLNKRLAKNT 122
Query: 172 TDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLE 215
T RPLL + T+ +L +L EER YA ++ ++ ++
Sbjct: 123 T--RPLLQE-------TDLQLKLQSLLEERHSLYAQSDLQIIID 157
>gi|390440354|ref|ZP_10228690.1| Shikimate kinase [Microcystis sp. T1-4]
gi|389836236|emb|CCI32816.1| Shikimate kinase [Microcystis sp. T1-4]
Length = 190
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 105/163 (64%), Gaps = 10/163 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++L+GMMG+GK+T+G++LS L Y FFD D LIE+ V G + +IF GE FR
Sbjct: 10 LRGLSVFLLGMMGAGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIRQIFADEGEATFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +LS + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ S
Sbjct: 69 ELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEVLVKRLKQ--DTS 126
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
RPLL T+ ++L L E+R YA A+ R+ + ++
Sbjct: 127 RPLLES-------TDLESKLELLLEQRRGLYAEADLRIVVSDL 162
>gi|86607258|ref|YP_476021.1| shikimate kinase [Synechococcus sp. JA-3-3Ab]
gi|115312165|sp|Q2JRJ6.1|AROK_SYNJA RecName: Full=Shikimate kinase; Short=SK
gi|86555800|gb|ABD00758.1| shikimate kinase [Synechococcus sp. JA-3-3Ab]
Length = 189
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 96/164 (58%), Gaps = 9/164 (5%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMM SGK+T+G L+ L FFD D L+EQ V G S+A+IF GE FR
Sbjct: 10 LRGVTVYLIGMMASGKSTLGAELAAQLRRPFFDTDALVEQ-VAGCSIAQIFAEQGEAHFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VL +LS +LVV+TGGG V RP NW Y+ G++VWLD E + QR+
Sbjct: 69 ELETQVLAQLSGYTRLVVATGGGIVLRPKNWSYLHHGLTVWLDAAPELIWQRLKR-DPGQ 127
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
RPLL + A L L +ER YA A+ RV + + A
Sbjct: 128 RPLLQTPDPQAA-------LQRLMQEREPFYAQADVRVPIHSEA 164
>gi|33239580|ref|NP_874522.1| shikimate kinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|81665111|sp|Q7VE85.1|AROK_PROMA RecName: Full=Shikimate kinase; Short=SK
gi|33237105|gb|AAP99174.1| Shikimate kinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 190
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 104/172 (60%), Gaps = 8/172 (4%)
Query: 45 KNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEI 104
K + ++ L GR IYLVGMMGSGK+T G L+ +L YSF D D LIE+ V +SV++I
Sbjct: 4 KLRPNQVIKKLGGRIIYLVGMMGSGKSTTGPHLAKLLKYSFIDQDELIEK-VAKSSVSQI 62
Query: 105 FKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALA 164
F+ GE FR+ ET+VL+++ LVV+TGGG VTR NW + +GI +WLD E L
Sbjct: 63 FREEGENGFRDIETQVLKQIGQRHSLVVATGGGLVTRSENWGVLHQGIVIWLDPNRELLF 122
Query: 165 QRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
R+ + T RPLL + D L +L ++R +YA A+ +S+E
Sbjct: 123 ARLKSDKTVVRPLLDNKDPKDV-------LDSLIKQRYLSYAEADLHISIER 167
>gi|358249076|ref|NP_001239733.1| uncharacterized protein LOC100781076 [Glycine max]
gi|255640183|gb|ACU20382.1| unknown [Glycine max]
Length = 289
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 119/200 (59%), Gaps = 4/200 (2%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
+K K+ E+ L G I+LVG+ S KT++GK+L+ L Y +FD D L+E++V G A+
Sbjct: 78 VKKKAAEVSSELKGTSIFLVGLKSSFKTSLGKLLADALRYYYFDSDNLVEEAVGGALAAK 137
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEAL 163
F+ E F E ETEVL++LS M +LVV G GAVT N ++ GIS+W+DVPL+ +
Sbjct: 138 SFRESDEKGFYECETEVLKQLSSMGRLVVCAGNGAVTSSTNLALLRHGISLWIDVPLDFV 197
Query: 164 AQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGH 223
A+ + + P + +Y E + L L++ YA A+A +S++ +A +LG
Sbjct: 198 ARDVIEDQSQFAP--SELSISGSYPE--DELGALYDRYRVGYATADAIISVQKVASRLGC 253
Query: 224 KDVSSLTPVTIAIEALEQIE 243
++ +T +A+EAL +IE
Sbjct: 254 DNLDEITREDMALEALGEIE 273
>gi|332711887|ref|ZP_08431817.1| shikimate kinase [Moorea producens 3L]
gi|332349215|gb|EGJ28825.1| shikimate kinase [Moorea producens 3L]
Length = 182
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 95/145 (65%), Gaps = 3/145 (2%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++L+GMMG+GKTTVG +L+ LGY F D D LIEQ + G ++ EIF GE FR
Sbjct: 5 LKGINVFLIGMMGAGKTTVGGLLASELGYGFCDTDALIEQ-IAGKTINEIFAEDGEETFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ ET+VL +LS +QL+V+TGGG V +P NW Y+ G+ VWLDVP+ L +R+ T
Sbjct: 64 QLETQVLSQLSAYQQLIVATGGGIVLKPQNWSYLHYGLVVWLDVPVAMLIERLQEDTT-- 121
Query: 175 RPLLHQCESGDAYTEALNRLSTLWE 199
RPLL + + + L++ +L+E
Sbjct: 122 RPLLQKPDPALELQKILDQRRSLYE 146
>gi|303289006|ref|XP_003063791.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454859|gb|EEH52164.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 167
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 103/161 (63%), Gaps = 4/161 (2%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++LVGMMG+GK++VGK L+ LGY+FFD D +IE SV ++ EIF GE FR
Sbjct: 5 LDGSSVFLVGMMGTGKSSVGKKLAAELGYNFFDTDEIIE-SVTKMTIPEIFAEEGEDGFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIA-AVGTD 173
E ET++L +++ ++ VV+TGGG V R NW +++ GI + L + LA+R+A A G
Sbjct: 64 EIETQILAEIASYKKCVVATGGGIVKRKANWMHLRNGIVLCLSGSAKLLARRVADADGGA 123
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
SRPL C+ GD A ++ + +ER E YANA+ V L
Sbjct: 124 SRPLFKDCD-GDVDKIA-EKIQEMMKERAEMYANADISVQL 162
>gi|37522279|ref|NP_925656.1| shikimate kinase [Gloeobacter violaceus PCC 7421]
gi|81709329|sp|Q7NH27.1|AROK_GLOVI RecName: Full=Shikimate kinase; Short=SK
gi|35213279|dbj|BAC90651.1| shikimate kinase [Gloeobacter violaceus PCC 7421]
Length = 177
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 95/159 (59%), Gaps = 9/159 (5%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YLVGMMGSGK+TVG++L+ LGY F D D LIEQ V G V EIF+ GE FR
Sbjct: 2 LKGVSLYLVGMMGSGKSTVGRLLAEKLGYGFVDLDALIEQ-VSGKRVGEIFEREGEAVFR 60
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E+ VL ++S +LVV+TGGG V NW Y+ G+ VWLD +E L R+ +
Sbjct: 61 DLESRVLAEVSAYTRLVVATGGGVVLARRNWGYLHHGVVVWLDADIETLLGRVEHE-PGT 119
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
RPLL GD + RL L ER YA A+ RVS
Sbjct: 120 RPLL---AGGDRHL----RLVELLGERARLYAQADVRVS 151
>gi|384247569|gb|EIE21055.1| shikimate kinase, partial [Coccomyxa subellipsoidea C-169]
Length = 178
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 106/181 (58%), Gaps = 11/181 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YLVGMMGSGK+TVGK+++ L Y + D D LIE+ G +VA+IF GE FR
Sbjct: 1 LDGSSLYLVGMMGSGKSTVGKMVAAALEYPYVDSDKLIEERA-GCTVAQIFAAQGEQAFR 59
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E+ VLQ+L+ + ++VSTGGG VTR NW M+ G+ +WL P E LA+R + GT S
Sbjct: 60 DLESSVLQELAASKAVMVSTGGGVVTREQNWESMRHGLVIWLTGPPELLAKRAVSDGTQS 119
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL Q SG + + L++ R YA A+ + LE G TP I
Sbjct: 120 RPLLSQGSSGSSEVDILDK-------RQHMYAQADLHIPLEG---SPGDPSDCGATPAVI 169
Query: 235 A 235
A
Sbjct: 170 A 170
>gi|428775242|ref|YP_007167029.1| shikimate kinase [Halothece sp. PCC 7418]
gi|428689521|gb|AFZ42815.1| shikimate kinase [Halothece sp. PCC 7418]
Length = 182
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 113/194 (58%), Gaps = 21/194 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMG GKT VG+ ++ L Y FFD D LI + V G ++ EIF GE +FR
Sbjct: 10 LQGLNLYLIGMMGVGKTAVGQAVAQQLTYRFFDTDELITR-VQGQAITEIFAKAGEDYFR 68
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET+VLQ+LS + V++TGGG + + NW ++Q+G+ VWLD L+ + +R+A S
Sbjct: 69 ELETKVLQELSAYARSVIATGGGIILQNQNWSFLQQGLVVWLDADLDLIMERLAE--DQS 126
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL Q E+ L+ L ++R + YA A+ ++ +E +P +
Sbjct: 127 RPLL-QTEN------PRQTLADLLDQRRDRYAQADLQIRVE-----------PKQSPNAV 168
Query: 235 AIEALEQIEGFLKE 248
A + +EQI +KE
Sbjct: 169 ASKIIEQIPSVIKE 182
>gi|119512821|ref|ZP_01631889.1| shikimate kinase [Nodularia spumigena CCY9414]
gi|119462543|gb|EAW43512.1| shikimate kinase [Nodularia spumigena CCY9414]
Length = 192
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 109/195 (55%), Gaps = 21/195 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMG+GKTTVG++L+ LGY F D D++I QS G S+ ++F GE FR
Sbjct: 16 LQGVNLYLIGMMGAGKTTVGQLLAKHLGYGFLDTDSVITQSA-GRSINQLFAEEGEAAFR 74
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL ++ +L ++TGGG + R NW Y+ G+ VWLDVP+E L R+A T
Sbjct: 75 QLESDVLAQVCAYTRLTIATGGGIILRTENWSYLHHGLVVWLDVPVELLYTRLAEDTT-- 132
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL + +L +L E+R Y+ A+ ++++ TP I
Sbjct: 133 RPLLQDADPQ-------GKLRSLLEQRTPLYSQADLKITVRE-----------EQTPEDI 174
Query: 235 AIEALEQIEGFLKEE 249
A +E I LK +
Sbjct: 175 ANRVIEAIPSVLKPQ 189
>gi|318042493|ref|ZP_07974449.1| shikimate kinase [Synechococcus sp. CB0101]
Length = 207
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 87/136 (63%), Gaps = 2/136 (1%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
+ N E+ L G +YLVGMMGSGK+T G+ L+ +LGY F D D+ IEQ V G S+ E
Sbjct: 1 MANPHAELRQRLEGLNLYLVGMMGSGKSTAGRHLAELLGYRFLDADSSIEQ-VAGRSIPE 59
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEAL 163
+F GE FR+ E VL +++ LVV+TGGG VTRP NW + +G+ +WLD P E L
Sbjct: 60 VFASEGEAGFRQLEAAVLNQIASWHSLVVATGGGVVTRPDNWGQLHQGVVIWLDAPEELL 119
Query: 164 AQRIAAVGTDSRPLLH 179
+R+++ T RPLL
Sbjct: 120 LERLSSDPT-PRPLLQ 134
>gi|33866734|ref|NP_898293.1| shikimate kinase [Synechococcus sp. WH 8102]
gi|81573829|sp|Q7U469.1|AROK_SYNPX RecName: Full=Shikimate kinase; Short=SK
gi|33639335|emb|CAE08717.1| Shikimate kinase [Synechococcus sp. WH 8102]
Length = 191
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 113/205 (55%), Gaps = 21/205 (10%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
+ + + ++ L GR +YLVGMMGSGKT+ G+ L+ LGY F D D +IEQ+ G S+ E
Sbjct: 1 MSDATLSLKQRLGGRSLYLVGMMGSGKTSTGRPLAEQLGYGFVDADAVIEQAA-GCSIPE 59
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEAL 163
IF+ GE FR E++VL + LVV+TGGG VT+ NW + GI VWLDV E L
Sbjct: 60 IFERDGEAGFRALESQVLNAIGQRHSLVVATGGGVVTQQENWGLLHSGIVVWLDVVPEQL 119
Query: 164 AQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGH 223
QR+ A T RPLL Q E DA ALN L +R YA A+ V
Sbjct: 120 MQRLRADST-VRPLL-QTEDPDA---ALN---ALLNQRRPLYAEADLTVV---------- 161
Query: 224 KDVSSLTPVTIAIEALEQIEGFLKE 248
++ TP+ +A L+ + LK+
Sbjct: 162 --INQETPLAVADGILQLLPSLLKD 184
>gi|88807136|ref|ZP_01122648.1| shikimate kinase [Synechococcus sp. WH 7805]
gi|88788350|gb|EAR19505.1| shikimate kinase [Synechococcus sp. WH 7805]
Length = 191
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 89/146 (60%), Gaps = 2/146 (1%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L GR +YLVGMMGSGKT+ G+ L+ L Y F D D +IEQ+ G ++ EIFK GE FR
Sbjct: 12 LGGRNLYLVGMMGSGKTSTGRPLAQRLQYGFVDADAVIEQAA-GCTIPEIFKRDGESGFR 70
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
ET+VL +S LVV+TGGGAVTRP NW M +GI +WLDV + L +R+ T
Sbjct: 71 SLETQVLSAISQRHSLVVATGGGAVTRPENWGAMHQGIVIWLDVERQQLLKRLEKDDT-P 129
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEE 200
RPLL + + A L ++ E
Sbjct: 130 RPLLQEQDPAMALDRLLMTRRPMYSE 155
>gi|172036297|ref|YP_001802798.1| shikimate kinase [Cyanothece sp. ATCC 51142]
gi|354553090|ref|ZP_08972397.1| Shikimate kinase [Cyanothece sp. ATCC 51472]
gi|171697751|gb|ACB50732.1| shikimate kinase [Cyanothece sp. ATCC 51142]
gi|353554920|gb|EHC24309.1| Shikimate kinase [Cyanothece sp. ATCC 51472]
Length = 189
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 101/165 (61%), Gaps = 10/165 (6%)
Query: 51 IEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGE 110
++ L G ++L+GMMG+GKTTVG+ L+ L Y FFD D LIE+ V +++IF GE
Sbjct: 4 MQQLLQGVNVFLIGMMGTGKTTVGQKLAQRLNYRFFDSDVLIER-VTQQRISDIFATQGE 62
Query: 111 GFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAV 170
FRE E++VL +L+ + V++TGGG + +PINW Y+ G+ VWLD P+ L +R+
Sbjct: 63 ETFRELESQVLSELASCTKSVIATGGGIILKPINWSYLHHGLIVWLDAPVPILTKRLKKD 122
Query: 171 GTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLE 215
T RPLL Q T+ +L +L EER YA + ++ ++
Sbjct: 123 KT--RPLLQQ-------TDLSLKLQSLLEERRYLYAQCDLQIIID 158
>gi|428311952|ref|YP_007122929.1| shikimate kinase [Microcoleus sp. PCC 7113]
gi|428253564|gb|AFZ19523.1| shikimate kinase [Microcoleus sp. PCC 7113]
Length = 178
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 94/160 (58%), Gaps = 10/160 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++LVGMMG+GKTTVG +L+ LGYSF D D +IE++ G S+ +IF GE FR
Sbjct: 4 LKGINVFLVGMMGTGKTTVGDLLARQLGYSFVDTDNVIEKAA-GKSINQIFADEGEEAFR 62
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E+EVL LS +L V+TGGG V + NW Y+ G+ +WLD P+E L R+ +
Sbjct: 63 QLESEVLSHLSAHTRLTVATGGGIVLKRFNWSYLHHGLVIWLDSPVEVLMARLQ--NDTT 120
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
RPLL A L T+ ++R YA A+ + +
Sbjct: 121 RPLLQNDNPAQA-------LQTILDQRRNLYAEADLHIQI 153
>gi|412985827|emb|CCO17027.1| shikimate kinase [Bathycoccus prasinos]
Length = 305
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 103/173 (59%), Gaps = 5/173 (2%)
Query: 46 NKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIF 105
N + L ++L+G+MG+GKTTVGK L+ LGY +FD D LIEQ + V EIF
Sbjct: 74 NDDNKTSESLQSSSVFLLGLMGTGKTTVGKKLADALGYGYFDTDQLIEQ-ICKQKVHEIF 132
Query: 106 KLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQ 165
+ GE FRE E+ +L +++ +++VVSTGGG VT NW ++ G++V L LA+
Sbjct: 133 EEDGEEGFRETESAILAEVASYKRVVVSTGGGIVTVRNNWMHLHNGVTVCLQGDHRTLAR 192
Query: 166 RIAAVGTDSRPLLHQCESGD----AYTEALNRLSTLWEERGEAYANANARVSL 214
R+ G +RPLL +C S + T+ ++ +LW +RG+ YA + VS+
Sbjct: 193 RVHKDGVGARPLLKECLSEEDEEAQITKIEEKIQSLWRDRGKMYAECDIAVSV 245
>gi|427728049|ref|YP_007074286.1| shikimate kinase [Nostoc sp. PCC 7524]
gi|427363968|gb|AFY46689.1| shikimate kinase [Nostoc sp. PCC 7524]
Length = 183
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 107/194 (55%), Gaps = 21/194 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMG+GKTTVG++L+ LGY F D D +I QS S+ +IF GE FR
Sbjct: 5 LQGVNLYLIGMMGAGKTTVGQLLAKQLGYGFIDTDNVIAQSAK-KSINQIFAEEGEATFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL ++ +L V+TGGG V R NW Y+ G+ VWLDVP+E L R+A +
Sbjct: 64 QLESDVLGQVCAYTKLTVATGGGIVLRRENWSYLHHGLIVWLDVPVELLYNRLAE--DTT 121
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL + +L +L E+R YA A+ R+ + + TP I
Sbjct: 122 RPLLQDVDPK-------GKLRSLLEQRTPLYAQADLRIPV-----------IEGETPEQI 163
Query: 235 AIEALEQIEGFLKE 248
A + + I LK+
Sbjct: 164 AEKVMAAIPSVLKK 177
>gi|428769981|ref|YP_007161771.1| shikimate kinase [Cyanobacterium aponinum PCC 10605]
gi|428684260|gb|AFZ53727.1| shikimate kinase [Cyanobacterium aponinum PCC 10605]
Length = 183
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 106/180 (58%), Gaps = 20/180 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G IYL+GMMGSGKTTVG++L+ L Y F D D +I +V S+ +IF GE FR
Sbjct: 5 LKGLNIYLIGMMGSGKTTVGELLAKELEYRFLDTDAII-SAVSEKSINQIFAEDGEDEFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VLQ++S V++TGGG + R NW +++ G+ VWL+VP++ L QR+ D+
Sbjct: 64 QLESDVLQEVSAYLYTVIATGGGIILRQQNWSHLRDGMVVWLNVPIDVLVQRLK--DDDT 121
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLE----------NIAVKLGHK 224
RPLL + E +L++L+E+R Y A+ + +E I V++ HK
Sbjct: 122 RPLLKR-------EELQTKLTSLYEQRKSLYQQADITIGIEENDNPNDIVQKIMVEIPHK 174
>gi|218438870|ref|YP_002377199.1| shikimate kinase [Cyanothece sp. PCC 7424]
gi|218171598|gb|ACK70331.1| Shikimate kinase [Cyanothece sp. PCC 7424]
Length = 184
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 100/163 (61%), Gaps = 8/163 (4%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G I+LVG+ G+GKTTVG+ L+ L Y FFD D +I++ V G ++ EIF GE FFR
Sbjct: 5 LKGLSIFLVGLPGTGKTTVGQGLAEQLDYRFFDSDVVIKK-VTGQTIKEIFATQGEDFFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGT-- 172
E E++VL++L + V++TGGG + + INW Y++ G+ +WLD P++ L QR+A
Sbjct: 64 ELESQVLRELCAYTRSVIATGGGIILKQINWSYLRHGLIIWLDAPVDLLIQRLADDSNRD 123
Query: 173 -DSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
+RPLL D E +L L +R YA A+ R+++
Sbjct: 124 DPNRPLLQV----DDLDELRQKLEFLLSQRQSLYAEADLRIAI 162
>gi|434405733|ref|YP_007148618.1| shikimate kinase [Cylindrospermum stagnale PCC 7417]
gi|428259988|gb|AFZ25938.1| shikimate kinase [Cylindrospermum stagnale PCC 7417]
Length = 184
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 21/195 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMG GKTTVG++L+ LGY F D D +I Q+ G S+ E+F GE FR
Sbjct: 5 LKGVNLYLIGMMGVGKTTVGRLLAQQLGYGFVDTDNVIVQAA-GKSINELFADKGEAAFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL ++ +L ++TGGG V + NW Y+ G+ VWLD P+E + R+A T
Sbjct: 64 QLESDVLAQVCAFTKLTIATGGGIVLKRENWGYLHHGLIVWLDAPVELILARLAEDTT-- 121
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL + D +L +L E+R Y+ A+ R++++ + TP
Sbjct: 122 RPLLQDTDPQD-------KLRSLLEQRKPLYSQADLRITVQ-----------AEETPEQT 163
Query: 235 AIEALEQIEGFLKEE 249
A +E I LK E
Sbjct: 164 AARIMEAIPTVLKPE 178
>gi|22298425|ref|NP_681672.1| shikimate kinase [Thermosynechococcus elongatus BP-1]
gi|34222550|sp|Q8DKH7.1|AROK_THEEB RecName: Full=Shikimate kinase; Short=SK
gi|22294604|dbj|BAC08434.1| shikimate kinase [Thermosynechococcus elongatus BP-1]
Length = 183
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 106/200 (53%), Gaps = 25/200 (12%)
Query: 50 EIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYG 109
+++ L G IYLVGMMG+GKTT G++L+ LGYSF D D +I + + EIF G
Sbjct: 2 KLQERLGGANIYLVGMMGAGKTTTGRLLAQRLGYSFVDTDAVIT-AFRQRPIREIFAQEG 60
Query: 110 EGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAA 169
E FRE E +VL ++S LVV+TGGG V P+NW Y+ GI VWL VPL L QR+
Sbjct: 61 EPAFRELEQQVLAQVSSYHHLVVATGGGIVLNPMNWSYLHHGIVVWLHVPLAVLCQRLRQ 120
Query: 170 VGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN--ARVSLENIAVKLGHKDVS 227
RPLL + + RL L + R YA A+ R++LE+
Sbjct: 121 --DRERPLLQEQPLEE-------RLGELLQARQHLYAQADLELRITLED----------- 160
Query: 228 SLTPVTIAIEALEQIEGFLK 247
TP T+ LE + LK
Sbjct: 161 --TPETVCDRLLETLPCILK 178
>gi|414079234|ref|YP_007000658.1| shikimate kinase [Anabaena sp. 90]
gi|413972513|gb|AFW96601.1| shikimate kinase [Anabaena sp. 90]
Length = 178
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 110/195 (56%), Gaps = 21/195 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMG GKTTVGK+L+ +GY F D D +I ++ G S+ EIF GE FR
Sbjct: 5 LKGVNLYLIGMMGVGKTTVGKLLAAEIGYRFVDTDEVIIKAA-GKSINEIFAENGEAEFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL + +L++STGGG + NW Y+ G+ +WLD P+ + QR+A ++
Sbjct: 64 QLESDVLAQACAYTKLIISTGGGVPMQQQNWSYLHHGLIIWLDAPIGIILQRLAE--DNT 121
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL DA E+ +L++LWE+R Y+ A+ +++ ++ TP I
Sbjct: 122 RPLLQ-----DADIES--KLTSLWEQRQPMYSQADLHITMS-----------ATETPEEI 163
Query: 235 AIEALEQIEGFLKEE 249
L I LK +
Sbjct: 164 VTRILATIPSILKPQ 178
>gi|440682487|ref|YP_007157282.1| shikimate kinase [Anabaena cylindrica PCC 7122]
gi|428679606|gb|AFZ58372.1| shikimate kinase [Anabaena cylindrica PCC 7122]
Length = 184
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 111/196 (56%), Gaps = 21/196 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMG GKTTVG++L+ LGY F D D +I ++ G S+ EIF GE FR
Sbjct: 5 LRGVNLYLIGMMGVGKTTVGRLLAKELGYGFLDTDDVIVKAA-GKSINEIFVDEGEAEFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL ++ +L ++TGGG V R NW Y++ G+ VWLD P+E L R+A D+
Sbjct: 64 QLESDVLAQVCAYTKLTIATGGGIVLRRENWGYLRHGLIVWLDAPVEILLNRLAE--DDT 121
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL D+ E +L +L E+R Y+ A+ +++ ++ TP I
Sbjct: 122 RPLLQ-----DSDPEG--KLRSLLEQRQSLYSQADLHITI-----------AATQTPEQI 163
Query: 235 AIEALEQIEGFLKEED 250
L+ I LK +D
Sbjct: 164 VTCVLDAIPSVLKNQD 179
>gi|427416801|ref|ZP_18906984.1| shikimate kinase [Leptolyngbya sp. PCC 7375]
gi|425759514|gb|EKV00367.1| shikimate kinase [Leptolyngbya sp. PCC 7375]
Length = 188
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 99/158 (62%), Gaps = 10/158 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YLVGMMGSGKTT+GK L+ +L Y F D D +I Q+ G S+ +IF GE FR
Sbjct: 6 LKGTNLYLVGMMGSGKTTIGKHLAKLLNYRFIDTDDVIVQAT-GQSINDIFAAQGEAAFR 64
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ ET+VL +++ V++TGGG V + NW Y+Q G+ VW++V ++ L R++ S
Sbjct: 65 DIETQVLGQVAPYTHTVIATGGGMVIKQQNWSYLQSGLVVWINVAVDELIARLSR--DKS 122
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
RPLL + GD ++L+TL E+R YA A+A V
Sbjct: 123 RPLL---KEGDLR----HKLTTLLEQRQARYAQADATV 153
>gi|428218974|ref|YP_007103439.1| shikimate kinase [Pseudanabaena sp. PCC 7367]
gi|427990756|gb|AFY71011.1| shikimate kinase [Pseudanabaena sp. PCC 7367]
Length = 196
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 96/162 (59%), Gaps = 9/162 (5%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G ++L+GMMG+GK+TVGK+ + LGY F D D IE S G S+ +IF GE FR
Sbjct: 11 LQGVNLFLIGMMGAGKSTVGKLAAQRLGYHFIDTDDTIE-SYAGKSIPQIFADSGEAEFR 69
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E VL ++S R LVV+TGGG V NW ++ G+ WLDVP+E L QR+
Sbjct: 70 QIEHNVLMQVSAYRNLVVATGGGIVVDRQNWAHLHSGVVAWLDVPIEVLHQRLTK-NNGK 128
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
RPLL Q E + + RL+ L+ +R Y A+ +V++ +
Sbjct: 129 RPLL-QVE------DPMQRLTNLYNQRLSLYQQADIQVAIPD 163
>gi|443316765|ref|ZP_21046197.1| shikimate kinase [Leptolyngbya sp. PCC 6406]
gi|442783620|gb|ELR93528.1| shikimate kinase [Leptolyngbya sp. PCC 6406]
Length = 221
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 92/141 (65%), Gaps = 3/141 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+YLVGMMG+GK+T+GK L+ VL Y FFD DTLIEQ+ S+ +IF GE FR+ ET
Sbjct: 40 LYLVGMMGAGKSTLGKRLAAVLKYRFFDTDTLIEQTAQ-RSIGDIFAEAGESTFRDLETA 98
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
V+++L+ ++VVSTGGG V R NW ++++G+ VW+DVPL L R+A RPLL
Sbjct: 99 VIRELAPYTRIVVSTGGGMVLRRENWGHLRQGVVVWVDVPLRELENRLAL--DRGRPLLQ 156
Query: 180 QCESGDAYTEALNRLSTLWEE 200
+ + D L++ L+ E
Sbjct: 157 RPDWRDHLATLLSQRQALYRE 177
>gi|17228739|ref|NP_485287.1| shikimate kinase [Nostoc sp. PCC 7120]
gi|60389805|sp|Q8YXG9.1|AROK_ANASP RecName: Full=Shikimate kinase; Short=SK
gi|17130591|dbj|BAB73201.1| shikimate kinase [Nostoc sp. PCC 7120]
Length = 181
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 108/194 (55%), Gaps = 21/194 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMG+GKTTVG +L+ LGY F D D +I Q+ S+ EIF GE FR
Sbjct: 5 LQGVNLYLIGMMGAGKTTVGHLLAKELGYGFLDTDNVIAQATK-KSINEIFAEAGEAGFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL ++ +L V+TGGG V R NW Y+ G+ +WLDVP++ L R+AA T
Sbjct: 64 QIESDVLAQVCSYTKLTVATGGGIVLRRENWSYLHHGLILWLDVPVDILYARLAADTT-- 121
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL + +L +L E+R Y+ A+ R+ + + TP I
Sbjct: 122 RPLLQD-------DDPKGKLRSLLEQRTPLYSQADLRICVN-----------AEETPEQI 163
Query: 235 AIEALEQIEGFLKE 248
A + ++ I LK+
Sbjct: 164 ANKVMQAIPSVLKQ 177
>gi|427707062|ref|YP_007049439.1| shikimate kinase [Nostoc sp. PCC 7107]
gi|427359567|gb|AFY42289.1| shikimate kinase [Nostoc sp. PCC 7107]
Length = 186
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 110/194 (56%), Gaps = 21/194 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMG+GKTTVG++L+ LGY F D D +I ++ G S+ ++F GE FR
Sbjct: 5 LQGVSLYLIGMMGAGKTTVGRLLAPQLGYRFVDTDDVIAKAT-GRSITQLFAEEGEAAFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL ++S L V+TGGG V R NW Y++ G+ VWLD+P+E L R+A T
Sbjct: 64 QLESDVLAQVSAHINLTVATGGGIVVRRENWGYLRHGLIVWLDLPVELLYNRLAEDTT-- 121
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL + +L +L E+R Y+ A+ +I V G TP I
Sbjct: 122 RPLLQDPDPQ-------GKLRSLLEQRQPLYSQADL-----HIMVNEGE------TPEQI 163
Query: 235 AIEALEQIEGFLKE 248
A + +E I LK+
Sbjct: 164 ANKVIEAIPSVLKK 177
>gi|194476762|ref|YP_002048941.1| shikimate kinase [Paulinella chromatophora]
gi|171191769|gb|ACB42731.1| shikimate kinase [Paulinella chromatophora]
Length = 187
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 107/201 (53%), Gaps = 21/201 (10%)
Query: 47 KSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFK 106
K+ E+ +L G IYLVG+MGSGK+T+GK L+ L YSF D D ++E + G ++++IF
Sbjct: 2 KNSELTKHLQGLNIYLVGIMGSGKSTIGKPLATALNYSFADTDDVLENAT-GQNISDIFS 60
Query: 107 LYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQR 166
+ GE FR E +VL ++S LVV+TGGG V NW M +GI VWLD+ L +R
Sbjct: 61 VNGESHFRSLEHKVLSEISHYHSLVVATGGGVVINSNNWGIMHQGIVVWLDLAPNILFKR 120
Query: 167 IAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDV 226
+ ++ T RPLL ++ L L +R Y A+ + N
Sbjct: 121 L-SIDTKPRPLLKNSHPKES-------LKILMAKRRSLYGEADIHILSNN---------- 162
Query: 227 SSLTPVTIAIEALEQIEGFLK 247
+P +A + LE + G LK
Sbjct: 163 --HSPDEVAKQILEALPGILK 181
>gi|254417028|ref|ZP_05030775.1| shikimate kinase [Coleofasciculus chthonoplastes PCC 7420]
gi|196176195|gb|EDX71212.1| shikimate kinase [Coleofasciculus chthonoplastes PCC 7420]
Length = 177
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 94/160 (58%), Gaps = 10/160 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMG GKTTVG+ L+ LGY F D D LIEQ V G ++ +IF GE FR
Sbjct: 6 LKGINVYLIGMMGVGKTTVGQRLAKELGYRFVDTDVLIEQ-VAGQTINQIFADRGEDEFR 64
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E +VL ++S L V+TGGG V + +NW Y+ +G+ VWLD P++ L QR+ T
Sbjct: 65 QLEAQVLSEVSAYTNLTVATGGGIVLKQMNWSYLHQGLIVWLDAPVDLLIQRLQDDTT-- 122
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
RPLL + A L L ++R YA A+ + +
Sbjct: 123 RPLLQTTDPTAA-------LQNLLDKRRLMYAEADLHIPI 155
>gi|257058860|ref|YP_003136748.1| shikimate kinase [Cyanothece sp. PCC 8802]
gi|256589026|gb|ACU99912.1| Shikimate kinase [Cyanothece sp. PCC 8802]
Length = 187
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 108/196 (55%), Gaps = 21/196 (10%)
Query: 52 EPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEG 111
+ L G IYL+GMMGSGK+T+GKIL+ L Y FFD D LIE+ V S+ +IF GE
Sbjct: 4 QKLLQGINIYLIGMMGSGKSTIGKILAQRLDYRFFDTDILIER-VTQQSINDIFVTQGET 62
Query: 112 FFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVG 171
FR+ ET+VL +++ + V++TGGG V NW Y+ G+ +WLDV ++ L R+ +
Sbjct: 63 VFRDIETQVLSEVAACTRSVIATGGGIVLNSQNWSYLHHGLIIWLDVSIKLLKTRL--IN 120
Query: 172 TDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTP 231
+RPLL + ++ +L TL E+R Y A+ + + + TP
Sbjct: 121 DTTRPLLKE-------SDLTLKLKTLDEQRRNLYNKADLSIVIN-----------QNRTP 162
Query: 232 VTIAIEALEQIEGFLK 247
+I E LE I +K
Sbjct: 163 ESIVSEILEAIPTVIK 178
>gi|119491298|ref|ZP_01623352.1| shikimate kinase [Lyngbya sp. PCC 8106]
gi|119453462|gb|EAW34624.1| shikimate kinase [Lyngbya sp. PCC 8106]
Length = 193
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 105/195 (53%), Gaps = 21/195 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMG+GKTTVGK+L+ Y F D D +I Q V G S+ +IF GE FR
Sbjct: 5 LRGINLYLIGMMGAGKTTVGKLLAKQFNYRFIDTDEVITQ-VAGQSINQIFTEQGEEAFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E++VL L ++LVV+TGGG + + NW Y++ G+ VWLDV E L QR+ T
Sbjct: 64 TLESQVLSGLCAHQRLVVATGGGIILQRANWGYLRHGLIVWLDVSPEDLYQRLKEDTT-- 121
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL + L RL L ++R YA A+ +V++ TP +
Sbjct: 122 RPLLQ-------HDNPLGRLQELLKQRESLYAEADVKVTI-----------TQHDTPEQV 163
Query: 235 AIEALEQIEGFLKEE 249
LE++ LK E
Sbjct: 164 VDHILEKVPTVLKTE 178
>gi|218245814|ref|YP_002371185.1| shikimate kinase [Cyanothece sp. PCC 8801]
gi|226729123|sp|B7JZT6.1|AROK_CYAP8 RecName: Full=Shikimate kinase; Short=SK
gi|218166292|gb|ACK65029.1| Shikimate kinase [Cyanothece sp. PCC 8801]
Length = 187
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 108/196 (55%), Gaps = 21/196 (10%)
Query: 52 EPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEG 111
+ L G IYL+GMMGSGK+T+GKIL+ L Y FFD D LIE+ V S+ +IF GE
Sbjct: 4 QKLLQGINIYLIGMMGSGKSTIGKILAQRLDYRFFDTDILIER-VTQQSINDIFVTQGET 62
Query: 112 FFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVG 171
FR+ ET+VL +++ + V++TGGG V NW Y+ G+ +WLDV ++ L R+ +
Sbjct: 63 VFRDIETQVLSEVAACTRSVIATGGGIVLNSQNWSYLHHGLIIWLDVSIKLLKTRL--IN 120
Query: 172 TDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTP 231
+RPLL + ++ +L TL E+R Y A+ + + + TP
Sbjct: 121 DTTRPLLKE-------SDLTLKLKTLDEQRRNLYNKADLTIVIN-----------QNRTP 162
Query: 232 VTIAIEALEQIEGFLK 247
+I E LE I +K
Sbjct: 163 ESIVSEILEAIPTVIK 178
>gi|354568276|ref|ZP_08987441.1| Shikimate kinase [Fischerella sp. JSC-11]
gi|353540639|gb|EHC10112.1| Shikimate kinase [Fischerella sp. JSC-11]
Length = 181
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 99/160 (61%), Gaps = 10/160 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMG+GK+T+G++L+ LGY F D D L+E++ G ++ ++F GE FR
Sbjct: 9 LQGINLYLIGMMGAGKSTLGRMLAYELGYGFVDTDNLLEKAA-GKTINQLFTEEGEAAFR 67
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E+EVL ++ +LV++TGGG V R NW Y+ GI +WLDV +E L R++ T
Sbjct: 68 QLESEVLAQVCAFTKLVIATGGGIVLRRDNWSYLHHGIIIWLDVAVEILYNRLSEDTT-- 125
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
RPLL T+ +L +L E+R Y A+ R+++
Sbjct: 126 RPLLQD-------TDPQGKLRSLLEQRQALYNQADLRITI 158
>gi|282900529|ref|ZP_06308473.1| Shikimate kinase [Cylindrospermopsis raciborskii CS-505]
gi|281194582|gb|EFA69535.1| Shikimate kinase [Cylindrospermopsis raciborskii CS-505]
Length = 188
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 106/197 (53%), Gaps = 21/197 (10%)
Query: 51 IEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGE 110
I+ L G +YL+GMMGSGKTT+G +L+ + YSF D D +I ++ G +++IF GE
Sbjct: 5 IKQLLKGVNLYLIGMMGSGKTTIGNLLAQAVNYSFIDTDEVIVKAA-GKPISDIFITEGE 63
Query: 111 GFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAV 170
FR+ E+ VL ++ +L ++TGGG V R NW Y+ G+ +WLDVP+E L +R+
Sbjct: 64 PAFRQLESNVLAQVCAYTKLTIATGGGIVLRRENWSYLHHGLIIWLDVPVEILLERLKE- 122
Query: 171 GTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLT 230
+RPLL ++ N+L +L +ER Y+ A+ + + T
Sbjct: 123 -DQTRPLLQDPDTQ-------NKLRSLLDERYSLYSQADLHIEI-----------TQQET 163
Query: 231 PVTIAIEALEQIEGFLK 247
P L+ I G LK
Sbjct: 164 PEQTVTNILQAIPGVLK 180
>gi|428773167|ref|YP_007164955.1| shikimate kinase [Cyanobacterium stanieri PCC 7202]
gi|428687446|gb|AFZ47306.1| shikimate kinase [Cyanobacterium stanieri PCC 7202]
Length = 184
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 98/164 (59%), Gaps = 10/164 (6%)
Query: 51 IEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGE 110
++ L G +YL+GMMGSGK+TVGK L+ L Y F D D IE ++ S+ +IF+ GE
Sbjct: 1 MDRLLRGLNVYLIGMMGSGKSTVGKFLAHKLAYRFLDTDNTIE-TLTQKSINKIFEEDGE 59
Query: 111 GFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAV 170
FR E +VL ++S V+STGGG V + NW +++ G+ +WLDVP++ L QR+
Sbjct: 60 EVFRTLENQVLAQVSSYLHTVISTGGGIVLKKDNWAHLRDGMVIWLDVPVDVLVQRLK-- 117
Query: 171 GTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
SRPLL + T+ +L+T+ +R YA A+ +++
Sbjct: 118 DDRSRPLLKE-------TDLQEKLTTILAQRKHLYAQADLTITI 154
>gi|317968056|ref|ZP_07969446.1| shikimate kinase [Synechococcus sp. CB0205]
Length = 207
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 99/169 (58%), Gaps = 9/169 (5%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
+++ ++ L G +YLVGMMGSGK++VG+ L+ L Y F D DT +EQ V G S+ E
Sbjct: 1 MEDTRVQLRQRLEGLNLYLVGMMGSGKSSVGRHLAEALDYRFLDADTSLEQ-VAGRSIPE 59
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEAL 163
IF GE FR E+ VL +++ LVV+TGGG VT+P NW + +G+ +WLD P L
Sbjct: 60 IFASEGETGFRALESAVLNQIASWHSLVVATGGGVVTQPANWGELHQGVVIWLDAPDAIL 119
Query: 164 AQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
R+ A T RPL+ + + RL++L ER YA A+ ++
Sbjct: 120 LARLEADPT-PRPLMEAEDRAE-------RLASLMAERRPLYAQADLQI 160
>gi|116071455|ref|ZP_01468723.1| shikimate kinase [Synechococcus sp. BL107]
gi|116065078|gb|EAU70836.1| shikimate kinase [Synechococcus sp. BL107]
Length = 191
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L GR IYL+GMMGSGKT+ G+ L+ LGY F D D +IEQ V ++ EIF+ GE FR
Sbjct: 12 LGGRSIYLIGMMGSGKTSTGRPLAKRLGYGFVDADAVIEQ-VANCTIPEIFERDGEEGFR 70
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E++VL +S LVV+TGGG VT+P NW + GI VWLDV L +R+ T
Sbjct: 71 LIESQVLNAISQRHSLVVATGGGVVTKPENWGQLHSGIVVWLDVDRLQLIERLRGDAT-Q 129
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEE 200
RPLL Q + A L + L++E
Sbjct: 130 RPLLQQPDPEAALDALLLQRRPLYDE 155
>gi|427724186|ref|YP_007071463.1| shikimate kinase [Leptolyngbya sp. PCC 7376]
gi|427355906|gb|AFY38629.1| shikimate kinase [Leptolyngbya sp. PCC 7376]
Length = 186
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 93/150 (62%), Gaps = 3/150 (2%)
Query: 51 IEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGE 110
+E L G IYL+GMMG+GK+T+ KI++ ++ Y D D +IEQ + GTS++ IF GE
Sbjct: 1 MEDLLKGLNIYLIGMMGTGKSTLAKIIAEIMNYRVLDSDDIIEQ-LAGTSISNIFAEMGE 59
Query: 111 GFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAV 170
FR+ ET+VL K+++ + VV+TGGG + NW Y+Q+G+++WLDVP L R+ +
Sbjct: 60 EEFRKLETQVLGKIAVQTRTVVATGGGIILSNDNWYYLQQGLTIWLDVPTPLLMDRLRS- 118
Query: 171 GTDSRPLLHQCESGDAYTEALNRLSTLWEE 200
RPLL + E L + +L+ E
Sbjct: 119 -DTRRPLLQNVDLETKLNELLEQRRSLYNE 147
>gi|75906776|ref|YP_321072.1| shikimate kinase [Anabaena variabilis ATCC 29413]
gi|115312135|sp|Q3MFQ9.1|AROK_ANAVT RecName: Full=Shikimate kinase; Short=SK
gi|75700501|gb|ABA20177.1| shikimate kinase [Anabaena variabilis ATCC 29413]
Length = 181
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 107/194 (55%), Gaps = 21/194 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMG+GKTTVG +L+ LGY F D D +I Q+ S+ EIF GE FR
Sbjct: 5 LQGVNLYLIGMMGAGKTTVGHLLAQELGYGFLDTDNVIAQAAK-KSINEIFAEAGEAGFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL ++ +L V+TGGG V R NW Y+ G+ VWLDV ++ L R+AA T
Sbjct: 64 QIESDVLAQVCSYTKLTVATGGGIVLRRENWSYLHHGLIVWLDVSVDILYARLAADTT-- 121
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL + +L +L E+R Y+ A+ R+ + + TP I
Sbjct: 122 RPLLQD-------DDPKGKLRSLLEQRTPLYSQADLRICVN-----------AEETPEQI 163
Query: 235 AIEALEQIEGFLKE 248
A + ++ I LK+
Sbjct: 164 ANKIMQVIPSVLKQ 177
>gi|298490902|ref|YP_003721079.1| shikimate kinase ['Nostoc azollae' 0708]
gi|298232820|gb|ADI63956.1| Shikimate kinase ['Nostoc azollae' 0708]
Length = 181
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 107/195 (54%), Gaps = 21/195 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL GMMG GKTTVG +L+ LGY F D D +I ++ G S+ EIF GE FR
Sbjct: 5 LKGVNLYLTGMMGVGKTTVGHLLAHQLGYGFIDTDDVIVKAA-GKSINEIFTEEGEAAFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL ++ +L ++TGGG V R NW YM+ G+ VWLD P++ L R+ D+
Sbjct: 64 QLESDVLGQVCAYTKLTIATGGGIVLRRENWGYMRHGLIVWLDAPVQILLNRLGE--DDT 121
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL ++ +L +L ++R Y+ A+ +++ + + TP I
Sbjct: 122 RPLLQD-------SDPEGKLYSLLQQRQPLYSQADLHITITD-----------NQTPEEI 163
Query: 235 AIEALEQIEGFLKEE 249
A +E I LK +
Sbjct: 164 ATRIIEAIPRVLKTQ 178
>gi|427718276|ref|YP_007066270.1| shikimate kinase [Calothrix sp. PCC 7507]
gi|427350712|gb|AFY33436.1| shikimate kinase [Calothrix sp. PCC 7507]
Length = 176
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 105/193 (54%), Gaps = 21/193 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMG+GKTT+G++L+ L Y F D D+++ Q+ G S+ +IF GE FR
Sbjct: 5 LKGVNLYLIGMMGTGKTTIGRLLAQQLSYGFVDTDSIVVQAA-GKSINQIFAELGEAAFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL ++ +L ++TGGG + + NW Y+ G+ VWLD P+E L R+ + +
Sbjct: 64 QLESDVLAQVCAYTKLTIATGGGIILQRENWGYLHHGLIVWLDAPVELLYTRL--LEDTT 121
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL + RL +L E+R Y+ A+ R+ + TP I
Sbjct: 122 RPLLQDVDPK-------GRLRSLLEQRTPLYSQADLRIPISE-----------EETPEQI 163
Query: 235 AIEALEQIEGFLK 247
A +E I LK
Sbjct: 164 ATRVIETIPSVLK 176
>gi|186686317|ref|YP_001869513.1| shikimate kinase [Nostoc punctiforme PCC 73102]
gi|238691206|sp|B2IX35.1|AROK_NOSP7 RecName: Full=Shikimate kinase; Short=SK
gi|186468769|gb|ACC84570.1| shikimate kinase [Nostoc punctiforme PCC 73102]
Length = 181
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 107/195 (54%), Gaps = 21/195 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMG GKTTVG +L+ LGY F D D +I ++ D S+ ++F GE FR
Sbjct: 5 LQGVNLYLIGMMGVGKTTVGPLLAKHLGYGFLDLDGVIAKATD-KSINQLFAEEGEAGFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL ++ +L ++TGGG V R NW Y+ G+ VWLDVP+E + +R+A T
Sbjct: 64 QIESDVLSQVCAFTKLTIATGGGIVLRRENWGYLHHGLIVWLDVPVELIYRRLAEDTT-- 121
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL + +L +L E+R Y+ A+ ++++ TP I
Sbjct: 122 RPLLQDADLK-------GKLRSLLEQRTPLYSQADLHITVQ-----------EGETPEDI 163
Query: 235 AIEALEQIEGFLKEE 249
A +E I LK +
Sbjct: 164 ANRIIEVIPNVLKPQ 178
>gi|428220177|ref|YP_007104347.1| shikimate kinase [Synechococcus sp. PCC 7502]
gi|427993517|gb|AFY72212.1| shikimate kinase [Synechococcus sp. PCC 7502]
Length = 184
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 96/155 (61%), Gaps = 9/155 (5%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G IYL+GMMG+GK+T+GK+L+ L Y F D D+L+E T VA+IF GE FR
Sbjct: 2 LDGTNIYLIGMMGAGKSTIGKLLADRLNYRFVDTDSLVEACTKRT-VAQIFAESGESGFR 60
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E +VL ++S +LVV+TGGG V +NW +++ G+ VWLDV ++ L R+ +
Sbjct: 61 QIEHQVLSEVSAYTRLVVATGGGIVLDRLNWSHLRNGLVVWLDVSMQQLYHRLRS-SHHV 119
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
RPLL E+ D L L+ L+E+R YA A+
Sbjct: 120 RPLL---ETAD----PLATLTKLYEQRRSLYAQAD 147
>gi|116073893|ref|ZP_01471155.1| shikimate kinase [Synechococcus sp. RS9916]
gi|116069198|gb|EAU74950.1| shikimate kinase [Synechococcus sp. RS9916]
Length = 201
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 14/194 (7%)
Query: 45 KNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEI 104
+N + L GR +YLVGMMGSGK++ G+ L+ LGY F D D +IEQ V G + +I
Sbjct: 6 QNGPHPLRSRLGGRNLYLVGMMGSGKSSSGRPLAQQLGYGFVDADPVIEQ-VAGRPIPQI 64
Query: 105 FKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALA 164
F GE FR E +VLQ + LVV+TGGG VT+P NW + +GI +WL+ + L
Sbjct: 65 FSEDGEDGFRAIEAQVLQAIGQRHSLVVATGGGVVTKPENWGVLHQGIVIWLNPGRDRLL 124
Query: 165 QRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL-----ENIAV 219
R+ T RPLL Q ES EAL+ L E R Y+ A+ ++S+ E +A
Sbjct: 125 ARLQNDST-QRPLL-QTES---PAEALD---ALLEARTPLYSEADLQLSVGDQSPEQVAT 176
Query: 220 KLGHKDVSSLTPVT 233
+ S LTP +
Sbjct: 177 MVLDALPSILTPAS 190
>gi|428297809|ref|YP_007136115.1| shikimate kinase [Calothrix sp. PCC 6303]
gi|428234353|gb|AFZ00143.1| shikimate kinase [Calothrix sp. PCC 6303]
Length = 181
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 112/197 (56%), Gaps = 21/197 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YLVGMMG+GKTT+G++L+ LGY F D D +I ++ G ++++IF GE FR
Sbjct: 5 LKGLNLYLVGMMGAGKTTLGRLLAKDLGYGFVDSDDVITKAA-GKNISQIFAEDGEDAFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL +++ +L ++TGGG + + NW Y+++G+ VWLDVP+ L +R+ T
Sbjct: 64 QLESDVLGQIAAFTRLTIATGGGIILKRENWSYLRQGLVVWLDVPVAELERRLREDTT-- 121
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL T +L +L E R Y+ ++ +++++ + TP I
Sbjct: 122 RPLLQD-------TGLEEKLVSLMETRYPLYSQSDLKITIQ-----------AGETPADI 163
Query: 235 AIEALEQIEGFLKEEDD 251
A + I LK D+
Sbjct: 164 AQRIIRDIPSVLKNPDN 180
>gi|323450494|gb|EGB06375.1| hypothetical protein AURANDRAFT_6341, partial [Aureococcus
anophagefferens]
Length = 165
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 100/160 (62%), Gaps = 15/160 (9%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLG-YSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKET 118
+YLVG+MGSGK++VG +S LG Y+F D D IEQ+ G +VA IF+ GE FR E
Sbjct: 2 VYLVGLMGSGKSSVGDAISRQLGSYTFVDTDGTIEQAT-GQTVAAIFESEGESGFRAVEE 60
Query: 119 EVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS---- 174
+VL +++ +LV++TGGG VT NW +++GI VWLDVP ++LA R+ G+D+
Sbjct: 61 QVLGQVAAYVRLVIATGGGIVTTKANWASLRQGIVVWLDVPTDSLAARL---GSDAERAK 117
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
RPLL + +A +L + E+R E Y + RVSL
Sbjct: 118 RPLLGPADELEA------KLDGMLEDRSELYGQCDVRVSL 151
>gi|170079112|ref|YP_001735750.1| shikimate kinase [Synechococcus sp. PCC 7002]
gi|169886781|gb|ACB00495.1| shikimate kinase [Synechococcus sp. PCC 7002]
Length = 186
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 101/160 (63%), Gaps = 10/160 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G IYL+GMMG+GK+T+ +I++ ++ Y D D++IE ++ S++EIF GE FR
Sbjct: 5 LKGLNIYLIGMMGTGKSTLAEIIAELMNYRSLDSDSIIE-TLAKQSISEIFAEMGEAEFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ ET+VL+++++ + VV+TGGG V NW Y+++G+++WLDVP+ L +R+ + S
Sbjct: 64 KLETQVLKQIAVQTRTVVATGGGIVVSQANWYYLRQGLTIWLDVPVPILVERLRS--DTS 121
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
RPLL + +L+ L ++R YA A+ + +
Sbjct: 122 RPLLQNVDLE-------RKLTQLLQQRRSRYAEADLHIQI 154
>gi|427734518|ref|YP_007054062.1| shikimate kinase [Rivularia sp. PCC 7116]
gi|427369559|gb|AFY53515.1| shikimate kinase [Rivularia sp. PCC 7116]
Length = 181
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 105/194 (54%), Gaps = 21/194 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YL+GMMG+GKTTVG++L+ L Y F D D +I S S+ +IF GE FR
Sbjct: 5 LQGINLYLIGMMGAGKTTVGRLLASELEYGFVDTDEVITASAK-KSINQIFAAEGEAEFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL ++S +L V+TGGG V + NW Y+ G+ VWLD E L R+ T
Sbjct: 64 KLESDVLSQVSAYTRLTVATGGGIVLKRQNWSYLHHGLIVWLDATAELLYDRLKEDTT-- 121
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL + + L +L L EER YA A+ R++ +K G TP I
Sbjct: 122 RPLLKE-------SNPLLKLRNLLEERESLYALADLRIT-----IKEGE------TPEEI 163
Query: 235 AIEALEQIEGFLKE 248
A L QI LK+
Sbjct: 164 AKRVLTQIPSVLKK 177
>gi|113955447|ref|YP_731746.1| shikimate kinase [Synechococcus sp. CC9311]
gi|113882798|gb|ABI47756.1| shikimate kinase [Synechococcus sp. CC9311]
Length = 212
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 109/198 (55%), Gaps = 21/198 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L GR +YL+GMMGSGK++ G+ L+ LGY F D D ++E ++ G + +IF+ GE FR
Sbjct: 24 LGGRNLYLIGMMGSGKSSTGRPLAQRLGYGFVDADGVVE-ALAGRPIPQIFETDGEQGFR 82
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E++VLQ + LVV+TGGG +T+P NW + +GI +WL + L R+ V
Sbjct: 83 TLESQVLQAIGQRHSLVVATGGGVITQPENWGVLHQGIVIWLAPERDQLLARL-LVDPGE 141
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL + + A L + E R YA A+ R++ +G + V+++T
Sbjct: 142 RPLLQEHDPAAA-------LDAILEARTPLYAEADLRIT-------VGDETVNAVTE--- 184
Query: 235 AIEALEQIEGFLKEEDDM 252
+ LE I G LK + M
Sbjct: 185 --QILEAIPGILKPHELM 200
>gi|297737259|emb|CBI26460.3| unnamed protein product [Vitis vinifera]
Length = 299
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 108/173 (62%), Gaps = 2/173 (1%)
Query: 71 TTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQL 130
+++GK+L+ LGY FD D+L+E++ G S A+ K E FR+ ETEVL++LS QL
Sbjct: 82 SSMGKLLADALGYYHFDNDSLVEEACGGESAAKSLKEQDEEEFRDSETEVLKQLSSRGQL 141
Query: 131 VVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEA 190
V G G+V IN ++ GIS+W+DVP+E +A+ + G + + + + ++Y+E
Sbjct: 142 AVCAGNGSVHSSINLALLRHGISIWIDVPIEMVAKNVIEEGV--QIPVTELSTAESYSET 199
Query: 191 LNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 243
+L ++EER YA A+A VSL+ +A +L + D+ ++T + +E L++I+
Sbjct: 200 GAQLVMVYEERKGGYATADASVSLQKVASQLSYDDLDAVTTEDMTMEVLKEIQ 252
>gi|352096131|ref|ZP_08957078.1| Shikimate kinase [Synechococcus sp. WH 8016]
gi|351677487|gb|EHA60636.1| Shikimate kinase [Synechococcus sp. WH 8016]
Length = 204
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 109/198 (55%), Gaps = 21/198 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L GR +YL+GMMGSGK++ G+ L+ LGY F D D ++E ++ G + +IF+ GE FR
Sbjct: 16 LGGRNLYLIGMMGSGKSSTGRPLAQRLGYGFVDADGVVE-ALAGRPIPQIFETEGEPGFR 74
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E++VLQ + LVV+TGGG +T+P NW + +GI +WL + L R+ A +
Sbjct: 75 ALESQVLQAIGERHSLVVATGGGVITQPENWGVLHQGIVIWLAPGRDQLLARLLA-DPGA 133
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL D EA L L E R YA A+ R++ +G + V+++T
Sbjct: 134 RPLLQ-----DQNPEAA--LDALLEARTPLYAEADLRIT-------VGDETVNAVT---- 175
Query: 235 AIEALEQIEGFLKEEDDM 252
LE I G LK + M
Sbjct: 176 -DRILEAIPGILKPHELM 192
>gi|72383312|ref|YP_292667.1| shikimate kinase [Prochlorococcus marinus str. NATL2A]
gi|115312159|sp|Q46HR4.1|AROK_PROMT RecName: Full=Shikimate kinase; Short=SK
gi|72003162|gb|AAZ58964.1| shikimate kinase [Prochlorococcus marinus str. NATL2A]
Length = 198
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 97/162 (59%), Gaps = 9/162 (5%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L GR I+L+GMMGSGK+ G +L+ ++ Y+F D D +IE++ S++ IF+ GE FR
Sbjct: 14 LGGRNIFLIGMMGSGKSQTGPVLAKMINYAFVDTDDVIEKA-SKQSISSIFEKDGEKVFR 72
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E +VL+++S LV++TGGG VT P NW + +GI +WLD+ L +R+ +
Sbjct: 73 DVEKKVLKEISQHHSLVIATGGGLVTLPENWGILHQGIVIWLDLDLRRSIKRLES-DHKR 131
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
RPLL GD E S ++E R Y ++ R+ +E+
Sbjct: 132 RPLL----LGDNLAE---NFSQIYESRKPIYLESDLRIEVED 166
>gi|124024892|ref|YP_001014008.1| shikimate kinase [Prochlorococcus marinus str. NATL1A]
gi|123959960|gb|ABM74743.1| Shikimate kinase [Prochlorococcus marinus str. NATL1A]
Length = 198
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 97/162 (59%), Gaps = 9/162 (5%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L GR I+L+GMMGSGK+ G +L+ ++ Y+F D D +IE++ S++ IF+ GE FR
Sbjct: 14 LGGRNIFLIGMMGSGKSQTGPVLAKMINYAFVDTDDVIEKA-SKQSISSIFEKDGEKVFR 72
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E +VL+++S LV++TGGG VT P NW + +GI +WLD+ L +R+ +
Sbjct: 73 DVEKKVLKEISQHHSLVIATGGGLVTLPENWGILHQGIVIWLDLDLRRSIKRLES-DQKR 131
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
RPLL GD E S ++E R Y ++ R+ +E+
Sbjct: 132 RPLL----LGDNLAE---NFSQIYESRKPIYLESDLRIEVED 166
>gi|87301781|ref|ZP_01084615.1| shikimate kinase [Synechococcus sp. WH 5701]
gi|87283349|gb|EAQ75304.1| shikimate kinase [Synechococcus sp. WH 5701]
Length = 220
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 92/158 (58%), Gaps = 9/158 (5%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G IYLVGMMG+GK++VG+ L+ LGY F D D+++EQ G S+ E+F+ GE FR
Sbjct: 19 LEGLNIYLVGMMGAGKSSVGRPLAQALGYRFIDADSVLEQHA-GCSIPELFEQRGEAGFR 77
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E E+ VL +++ LVV+TGGG V+RP NW M++G+ VWLD E L
Sbjct: 78 ELESAVLNRIACWHSLVVATGGGVVSRPCNWGQMRQGLVVWLDA-DELLLLERLRADPGQ 136
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
RPLL A + RL L ER Y+ A+ RV
Sbjct: 137 RPLL-------ATADPEARLRQLLSERRPLYSQADLRV 167
>gi|282898123|ref|ZP_06306118.1| Shikimate kinase [Raphidiopsis brookii D9]
gi|281197267|gb|EFA72168.1| Shikimate kinase [Raphidiopsis brookii D9]
Length = 167
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 10/164 (6%)
Query: 51 IEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGE 110
I+ L G +YL+GMMGSGKTT+G +L+ + YSF D D +I ++ G +++IF GE
Sbjct: 5 IKQSLKGVNLYLIGMMGSGKTTIGSLLAQAVNYSFIDTDEVIVKAA-GKPISDIFTTEGE 63
Query: 111 GFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAV 170
FR+ E+ VL ++ +L ++TGGG V R NW Y+ G+ +WLDV +E L +R+
Sbjct: 64 TAFRQLESNVLAQVCAYTKLTIATGGGIVLRRENWSYLHHGLIIWLDVSVEILLERLKED 123
Query: 171 GTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
T RPLL + + ++L +L +ER Y+ A+ + +
Sbjct: 124 QT--RPLLQ-------HPDPQSKLRSLLDERYSLYSQADLHIEI 158
>gi|225850938|ref|YP_002731172.1| shikimate kinase [Persephonella marina EX-H1]
gi|254806779|sp|C0QR76.1|AROK_PERMH RecName: Full=Shikimate kinase; Short=SK
gi|225646155|gb|ACO04341.1| shikimate kinase [Persephonella marina EX-H1]
Length = 164
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 93/159 (58%), Gaps = 13/159 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R IYLVG MGSGK+TVGK+L+ LG+ F D D IE+ +G + +IF+ GE +FR+ E
Sbjct: 2 RNIYLVGFMGSGKSTVGKLLAEKLGFRFVDIDQEIEKE-EGKKIKDIFREKGESYFRDLE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
++++ + LVVSTGGG N R M++ G +WLD PLE + +R G D RP
Sbjct: 61 KRMIERFLGSKNLVVSTGGGLGADSENMRKMKENGTVIWLDTPLETVFERCK--GDDERP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLE 215
LL + + L+E+R + YA A+ R+S E
Sbjct: 119 LLKKNRK---------EIKELFEKRKKIYAQADIRISTE 148
>gi|158337774|ref|YP_001518950.1| shikimate kinase [Acaryochloris marina MBIC11017]
gi|158308015|gb|ABW29632.1| shikimate kinase [Acaryochloris marina MBIC11017]
Length = 182
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 86/146 (58%), Gaps = 3/146 (2%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YLVGMMG GK+T G+ L+ LGY F D D LI Q + G ++ +IF GE FR
Sbjct: 4 LKGVNLYLVGMMGCGKSTTGRALAKQLGYGFVDTDDLITQ-LTGQAITDIFAESGEDHFR 62
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL +++ LVV+TGGG V NW ++Q G+ +WLDV E L QR+ A S
Sbjct: 63 QVESKVLSEVAAHTNLVVATGGGIVLDKKNWSFLQHGLVIWLDVEAEQLWQRLQA--DQS 120
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEE 200
RPLL + E L + L+ +
Sbjct: 121 RPLLQKPNPQQVLEELLTQRRPLYRQ 146
>gi|359489964|ref|XP_002269702.2| PREDICTED: shikimate kinase, chloroplastic-like [Vitis vinifera]
Length = 306
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 108/178 (60%), Gaps = 7/178 (3%)
Query: 71 TTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQL 130
+++GK+L+ LGY FD D+L+E++ G S A+ K E FR+ ETEVL++LS QL
Sbjct: 84 SSMGKLLADALGYYHFDNDSLVEEACGGESAAKSLKEQDEEEFRDSETEVLKQLSSRGQL 143
Query: 131 VVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEA 190
V G G+V IN ++ GIS+W+DVP+E +A+ + G + + + ++Y+E
Sbjct: 144 AVCAGNGSVHSSINLALLRHGISIWIDVPIEMVAKNVIEEGVQIP--VTELSTAESYSET 201
Query: 191 -----LNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 243
L +L ++EER YA A+A VSL+ +A +L + D+ ++T + +E L++I+
Sbjct: 202 GGNQVLAQLVMVYEERKGGYATADASVSLQKVASQLSYDDLDAVTTEDMTMEVLKEIQ 259
>gi|397566788|gb|EJK45217.1| hypothetical protein THAOC_36180 [Thalassiosira oceanica]
Length = 278
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 116/216 (53%), Gaps = 24/216 (11%)
Query: 14 SVKVSCTFNSLSASVLESGNVHAPIDEAQVLK------------NKSQEIEPYLSGRCIY 61
S +++ +L+A++L + V P ++LK + ++ + P L G +Y
Sbjct: 32 SRELTAKMQALAATLLPTRGVENPYKNPELLKKTADGDEEGLLVDPARLLSPRLRGCNLY 91
Query: 62 LVGMMGSGKTTVGKILSGVLG-YSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEV 120
L+GMMGSGK+ VG L+ +G Y+F D D ++E++V G S+ EIF+ GE FR+ E +V
Sbjct: 92 LIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAV-GMSIPEIFEKEGEDAFRDAEAQV 150
Query: 121 LQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
L + + V+ TGGG VTR NW +Q G+ ++L E + +RI GTD RPLL
Sbjct: 151 LDSVHAHVRCVIGTGGGLVTRNQNWAKLQTGLVLYLKTDPETIYKRIE--GTD-RPLLQT 207
Query: 181 CESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
+ L L L EER Y A+ + +E+
Sbjct: 208 -------DDPLATLKDLTEERRGKYEQADVTIEVED 236
>gi|359458945|ref|ZP_09247508.1| shikimate kinase [Acaryochloris sp. CCMEE 5410]
Length = 182
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G +YLVGMMG GK+T G+ L+ LGY F D D LI Q + G ++ +IF GE FR
Sbjct: 4 LKGVNLYLVGMMGCGKSTTGRALAQQLGYGFVDTDDLITQ-LTGQAITDIFAESGEAHFR 62
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++VL +++ +LVV+TGGG V NW ++Q G+ +WLDV + L QR+ S
Sbjct: 63 QVESKVLSEVAAHTKLVVATGGGIVLDKKNWSFLQHGLVIWLDVEPDQLWQRLQT--DQS 120
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLE 215
RPLL + + E L +R Y A+A + L+
Sbjct: 121 RPLLQKPNPQEVLEELLT-------QRRPLYRQADAHIVLK 154
>gi|168184585|ref|ZP_02619249.1| shikimate kinase [Clostridium botulinum Bf]
gi|237795314|ref|YP_002862866.1| shikimate kinase [Clostridium botulinum Ba4 str. 657]
gi|259585300|sp|C3KXE0.1|AROK_CLOB6 RecName: Full=Shikimate kinase; Short=SK
gi|182672398|gb|EDT84359.1| shikimate kinase [Clostridium botulinum Bf]
gi|229260499|gb|ACQ51532.1| shikimate kinase [Clostridium botulinum Ba4 str. 657]
Length = 170
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 93/156 (59%), Gaps = 3/156 (1%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM SGK+T+G+ +S +L Y D DTLIE+ ++G S+ EIFK+YGE +FREKE E
Sbjct: 4 IVLIGMPLSGKSTLGREISKILKYDLIDTDTLIEK-MEGKSIKEIFKIYGEDYFREKELE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ KL V+STGGG N ++K G +V+L VPLE L +R+ G D+RPLL
Sbjct: 63 IINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKGEDTRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
++ NR+ ++E+ N N SL
Sbjct: 123 KNNDTKFLEEMYKNRIE-IYEKAHTIICNTNHEESL 157
>gi|123965355|ref|YP_001010436.1| shikimate kinase [Prochlorococcus marinus str. MIT 9515]
gi|123199721|gb|ABM71329.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9515]
Length = 185
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 93/162 (57%), Gaps = 9/162 (5%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ GR I+L+GMM SGK+ G +L+ L Y + D D LIE+ V T + E+F GE FR
Sbjct: 13 IKGRSIFLIGMMASGKSQTGPVLAKFLRYKYIDLDKLIEKIVKKT-IIEMFHEDGEEKFR 71
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET L++ + LV+STGGG + +P NW +++GI +W+D E +R+ D+
Sbjct: 72 ELETNCLKETIKIPSLVISTGGGVIAKPENWGILRQGIIIWIDTKQEIALERLQN-DIDN 130
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
RPLL + + Y S +++ R Y+ A+ RV ++N
Sbjct: 131 RPLLQGKDLKELY-------SRIFQSRKNLYSQADLRVEVDN 165
>gi|159902664|ref|YP_001550008.1| shikimate kinase [Prochlorococcus marinus str. MIT 9211]
gi|254806781|sp|A9BCW6.1|AROK_PROM4 RecName: Full=Shikimate kinase; Short=SK
gi|159887840|gb|ABX08054.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9211]
Length = 197
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 93/160 (58%), Gaps = 10/160 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L GR +YLVGMMGSGK+ G +L+ L Y F D D +IE+ V S++EIF GE FR
Sbjct: 14 LGGRNLYLVGMMGSGKSRTGPVLAKKLSYGFVDVDDVIEK-VTNQSISEIFDQEGEIGFR 72
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET++LQ++ LVV+TGGG VTRP NW + +G+ +W+D+ E R+ + T
Sbjct: 73 EIETQILQEIGQRHSLVVATGGGIVTRPENWGILHQGVVIWIDLDREIALSRLRSDET-P 131
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
RPLL + + L++ER Y ++ +S+
Sbjct: 132 RPLLQK--------NLDDNFDCLFKERLPIYLESDVHLSV 163
>gi|33860667|ref|NP_892228.1| shikimate kinase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33633609|emb|CAE18566.1| Shikimate kinase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 185
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 95/162 (58%), Gaps = 9/162 (5%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ GR IYL+GMM SGK+ G +L+ +L Y + D D LIE ++ ++ E+F+ GE FR
Sbjct: 13 IQGRSIYLIGMMASGKSKTGPVLAELLRYKYIDLDKLIE-NIAKKTINEMFQEDGEKAFR 71
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET L++ + L+VSTGGG +++P NW +++GI +W+D E +R+ ++
Sbjct: 72 ELETNCLKETIKIPSLIVSTGGGIISKPENWGVLRQGIIIWIDTKQEIALERLKK-DIEN 130
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
RPLL + D Y + +++ R Y+ A+ RV + N
Sbjct: 131 RPLLQGEDLSDLYNQ-------IFQSRKNLYSQADLRVEVNN 165
>gi|297183671|gb|ADI19796.1| shikimate kinase [uncultured alpha proteobacterium EB000_37G09]
Length = 207
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 110/199 (55%), Gaps = 15/199 (7%)
Query: 46 NKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIF 105
++SQ + Y + + LVG+MG+GKT++G L+ +G F D D IE+ V + +IF
Sbjct: 20 DRSQHDKSY--HKSVVLVGLMGAGKTSLGSKLARHMGRPFIDSDAEIER-VTNVRIRDIF 76
Query: 106 KLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALA 164
+L GE FRE E ++K+ +++STGGGA +P + QK +SVWLD P E L
Sbjct: 77 ELGGEAHFREIEARTIEKILDGPPVILSTGGGAFCQPDVRDLIKQKALSVWLDAPPEILL 136
Query: 165 QRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHK 224
RI T SRPLLH GD L L +L E+R YA A+ ++L+ A+ L H
Sbjct: 137 ARIG--NTASRPLLH----GD---NPLKILKSLAEDRNPHYAKAD--LTLKTDAIGLSHS 185
Query: 225 DVSSLTPVTIAIEALEQIE 243
T VT AI+ E I+
Sbjct: 186 VTKLATLVTAAIQQSESID 204
>gi|424836154|ref|ZP_18260811.1| shikimate kinase [Clostridium sporogenes PA 3679]
gi|365977556|gb|EHN13655.1| shikimate kinase [Clostridium sporogenes PA 3679]
Length = 170
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 89/152 (58%), Gaps = 10/152 (6%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM SGK+T+G+ LS +L Y F D D LIE+ ++G S+ EIFK+YGE +FREKE E
Sbjct: 4 IILIGMPLSGKSTLGRELSKILKYDFIDTDILIEE-IEGKSIKEIFKIYGEDYFREKELE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ KL V+STGGG N ++ G +V+L VPLE L +R+ + RPLL
Sbjct: 63 IINKLKKENNKVISTGGGLPIYNGNIYKLKNIGFTVYLKVPLEELIKRMVKKANNIRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANA 210
++ L +++ER E Y A+
Sbjct: 123 KNNDT--------KFLEGMYKERIEIYEKAHT 146
>gi|255291839|dbj|BAH89269.1| putative shikimate kinase [Diospyros kaki]
Length = 86
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 66/86 (76%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVGMMGSGKTTVGK+LS L YSF D D +E+++ G+ V +IFK +GE +FR E+E
Sbjct: 1 IYLVGMMGSGKTTVGKVLSEALAYSFVDSDKYVEEALGGSPVTQIFKQFGESYFRGYESE 60
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINW 145
L+ LSLM + VV+T GGAV RPINW
Sbjct: 61 ALRNLSLMPRQVVATDGGAVIRPINW 86
>gi|219127919|ref|XP_002184173.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404404|gb|EEC44351.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 277
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 94/163 (57%), Gaps = 12/163 (7%)
Query: 53 PYLSGRCIYLVGMMGSGKTTVGKILSGVLG-YSFFDCDTLIEQSVDGTSVAEIFKLYGEG 111
P L+G +Y VG+MGSGK+ VG IL+ +G Y+F D D +IE++ G ++ EIFK GE
Sbjct: 82 PRLNGSNVYFVGIMGSGKSAVGDILARRMGTYNFLDTDEIIERAT-GMTIPEIFKAEGEE 140
Query: 112 FFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVG 171
FR E +VL + + ++STGGG V + NW +Q G+ VWLD E + +RI G
Sbjct: 141 GFRTVEAQVLDSVHPYVRCIISTGGGIVIKLENWSKLQTGLVVWLDCEPEVIMRRIE--G 198
Query: 172 TDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
TD RPLL L +L L ER + Y+ A+ R+ +
Sbjct: 199 TD-RPLLQT-------DNPLQKLKDLLAEREDKYSQADIRIKV 233
>gi|397609609|gb|EJK60447.1| hypothetical protein THAOC_19201 [Thalassiosira oceanica]
Length = 282
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 102/179 (56%), Gaps = 12/179 (6%)
Query: 39 DEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLG-YSFFDCDTLIEQSVD 97
DE +L + ++ + P L G +YL+GMMGSGK+ VG L+ +G Y+F D D ++E++V
Sbjct: 73 DEEGLLVDPARLLSPRLRGCNLYLIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAV- 131
Query: 98 GTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLD 157
G S+ EIF+ GE FR+ E +VL + + V+ TGGG VTR NW +Q G+ ++L
Sbjct: 132 GMSIPEIFEKEGEDAFRDAEAQVLDSVHAHVRCVIGTGGGLVTRNQNWAKLQTGLVLYLK 191
Query: 158 VPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
E + +RI GTD RPLL + L L L EER Y A+ + +E+
Sbjct: 192 TDPETIYKRIE--GTD-RPLLQT-------DDPLATLKDLTEERRGKYEQADVTIEVED 240
>gi|254526222|ref|ZP_05138274.1| shikimate kinase [Prochlorococcus marinus str. MIT 9202]
gi|221537646|gb|EEE40099.1| shikimate kinase [Prochlorococcus marinus str. MIT 9202]
Length = 185
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 105/186 (56%), Gaps = 25/186 (13%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ GR I+L+GMMGSGK+ G L+ +L Y + D DTLIE+ + S+ +IFK GE FR
Sbjct: 13 IKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLIEK-LAKKSINQIFKDEGEDNFR 71
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWL----DVPLEALAQRIAAV 170
E E L++ + LV+STGGG VT+P NW +++GI W+ D+ +E L IA
Sbjct: 72 ELEANCLKETIKIPSLVISTGGGIVTKPENWGILRQGIIAWIDLEKDIAIERLKNEIA-- 129
Query: 171 GTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL---G 222
+RPLL D Y ++++ R Y+ A+ R+ ++E +A+K+
Sbjct: 130 ---NRPLLQGKNINDLYM-------SIFQSRENLYSQADLRIQVKKENIEEVAMKIINAI 179
Query: 223 HKDVSS 228
HK++ S
Sbjct: 180 HKEIIS 185
>gi|124021918|ref|YP_001016225.1| shikimate kinase [Prochlorococcus marinus str. MIT 9303]
gi|254806780|sp|A2C650.1|AROK_PROM3 RecName: Full=Shikimate kinase; Short=SK
gi|123962204|gb|ABM76960.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9303]
Length = 192
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 99/172 (57%), Gaps = 14/172 (8%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L GR +YLVGMM SGK++ G+ L+ L Y F D D +IEQ + G + +IF GE FR
Sbjct: 14 LGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQ-LAGQPIPKIFNEEGEEGFR 72
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E++VL + LVV+TGGG V++P NW + +GI +WL+ E L +R+ A + +
Sbjct: 73 AMESQVLNAIGQRHSLVVATGGGMVSKPENWGILHQGIVIWLNPGREELFRRLHA-DSGN 131
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL-----ENIAVKL 221
RPLL Q E +A L+ ER YA A+ RV + + IA+K+
Sbjct: 132 RPLL-QTEDPEAA------FDCLFAERLPLYAEADLRVEVGAEEPDGIALKI 176
>gi|225848020|ref|YP_002728183.1| shikimate kinase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643921|gb|ACN98971.1| shikimate kinase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 166
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 102/187 (54%), Gaps = 25/187 (13%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ IYLVG MGSGK+TVGK+L+ F D D LIE+ + + +IF+ GE +FRE E
Sbjct: 2 KNIYLVGFMGSGKSTVGKLLADKTSRDFVDVDKLIEER-EKMKIKDIFEKKGELYFRELE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+ LQ+L + LVVSTGGG N M+K GI +WLD+ L + +RI ++RP
Sbjct: 61 KKYLQELLNTQNLVVSTGGGLGADAENMNQMKKNGIVIWLDLNLNTILERIK--NDENRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAI 236
LL+Q L+++ L++ER + Y A R++ EN TP I
Sbjct: 119 LLNQ---------PLDKIKKLFDERKKVYGLATYRINAEN------------KTPFQIVE 157
Query: 237 EALEQIE 243
E L +I+
Sbjct: 158 EILNKIK 164
>gi|387219603|gb|AFJ69510.1| shikimate kinase, partial [Nannochloropsis gaditana CCMP526]
Length = 450
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 107/188 (56%), Gaps = 10/188 (5%)
Query: 36 APIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQS 95
AP E + EI+ + G +YLVGM GSGKTT+G++L+ L Y + D D IEQ
Sbjct: 196 APWKEGADFLPELMEIKMRIQGVNVYLVGMPGSGKTTLGRMLAEGLQYRWMDLDQFIEQK 255
Query: 96 VDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVW 155
+ G + ++F+ GE +R++ET + L Q VVSTGGG + R N ++ G+ VW
Sbjct: 256 L-GKAATKVFEEDGEEVWRKQETLGMGALQTYVQTVVSTGGGIMQRKENLPFLHSGLIVW 314
Query: 156 LDVPLEALAQRIAAVG-TDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
LD+P E + R+ + G + RPLL A ++ + + +L+EER YA A+ RV L
Sbjct: 315 LDLPPEGIVARMQSSGEIEKRPLLK------AASDPVQAVRSLYEERKGNYALADVRVVL 368
Query: 215 --ENIAVK 220
E+ AVK
Sbjct: 369 RGEDDAVK 376
>gi|422295213|gb|EKU22512.1| shikimate kinase, partial [Nannochloropsis gaditana CCMP526]
Length = 446
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 107/188 (56%), Gaps = 10/188 (5%)
Query: 36 APIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQS 95
AP E + EI+ + G +YLVGM GSGKTT+G++L+ L Y + D D IEQ
Sbjct: 192 APWKEGADFLPELMEIKMRIQGVNVYLVGMPGSGKTTLGRMLAEGLQYRWMDLDQFIEQK 251
Query: 96 VDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVW 155
+ G + ++F+ GE +R++ET + L Q VVSTGGG + R N ++ G+ VW
Sbjct: 252 L-GKAATKVFEEDGEEVWRKQETLGMGALQTYVQTVVSTGGGIMQRKENLPFLHSGLIVW 310
Query: 156 LDVPLEALAQRIAAVG-TDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
LD+P E + R+ + G + RPLL A ++ + + +L+EER YA A+ RV L
Sbjct: 311 LDLPPEGIVARMQSSGEIEKRPLLK------AASDPVQAVRSLYEERKGNYALADVRVVL 364
Query: 215 --ENIAVK 220
E+ AVK
Sbjct: 365 RGEDDAVK 372
>gi|187779496|ref|ZP_02995969.1| hypothetical protein CLOSPO_03092 [Clostridium sporogenes ATCC
15579]
gi|187773121|gb|EDU36923.1| shikimate kinase [Clostridium sporogenes ATCC 15579]
Length = 174
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 91/152 (59%), Gaps = 10/152 (6%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM SGK+T+G+ LS +L Y F D D LIE+ ++G ++ EIFK+YGE +FREKE E
Sbjct: 8 IILIGMPLSGKSTLGRELSKILKYDFIDTDVLIEE-IEGENIKEIFKIYGEDYFREKELE 66
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ KL + V+STGGG N ++ G +V+L VPLE L +R+ ++RPLL
Sbjct: 67 IINKLKKEKNKVISTGGGLPIYNGNIYKLKNIGFTVYLKVPLEELIKRMVKKENNTRPLL 126
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANA 210
++ L +++ER + Y A+
Sbjct: 127 KNNDT--------KFLEGMYKERIDIYEKAHT 150
>gi|87125217|ref|ZP_01081063.1| Shikimate kinase [Synechococcus sp. RS9917]
gi|86166986|gb|EAQ68247.1| Shikimate kinase [Synechococcus sp. RS9917]
Length = 201
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 101/176 (57%), Gaps = 12/176 (6%)
Query: 39 DEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDG 98
D +Q L + ++ L GR +YLVGMMGSGK++ G+ L+ L Y F D D +IEQ V G
Sbjct: 3 DPSQPLPHP---LKARLGGRNLYLVGMMGSGKSSSGRPLAASLDYGFVDADAVIEQ-VAG 58
Query: 99 TSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDV 158
S+ +F+ GE FR+ E++VLQ + LVV+TGGG VTRP NW + +G+ VWLD
Sbjct: 59 RSIPHLFEEEGEEGFRDLESQVLQAIGQRHSLVVATGGGIVTRPENWGVLHQGLVVWLDP 118
Query: 159 PLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
+ L QR+ RPLL + A T L TL R YA A+ ++++
Sbjct: 119 DRDQLLQRLRR-DPGERPLLRSADP--AAT-----LDTLLSARRPLYAEADVQLTI 166
>gi|387818109|ref|YP_005678454.1| shikimate kinase I [Clostridium botulinum H04402 065]
gi|322806151|emb|CBZ03719.1| shikimate kinase I [Clostridium botulinum H04402 065]
Length = 170
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 88/152 (57%), Gaps = 10/152 (6%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE E
Sbjct: 4 IVLIGMPLSGKSTLGRELSKILKYDLIDTDTLIEEMED-KSIKEIFKIYGEDYFREKELE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ KL V+STGGG N ++K G +V+L VPLE L +R+ D+RPLL
Sbjct: 63 IINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANA 210
++ L +++ R E Y A+
Sbjct: 123 KNNDT--------KFLEEMYKNRIEIYEKAHT 146
>gi|85702958|ref|ZP_01034062.1| shikimate kinase [Roseovarius sp. 217]
gi|85671886|gb|EAQ26743.1| shikimate kinase [Roseovarius sp. 217]
Length = 193
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 86/137 (62%), Gaps = 4/137 (2%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
G+ + LVGMMG+GKT VGK L+ +G F D DT IE++ + T +AEIF+ GE FFR +
Sbjct: 17 GKTVVLVGMMGAGKTAVGKALAAKIGVPFLDSDTEIEKAANMT-IAEIFQRDGEAFFRAR 75
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSR 175
ETEV+ +L ++ ++STGGGA N + +KG+SVWLD L L R+ G ++R
Sbjct: 76 ETEVIDRLLDGQRSILSTGGGAFLAERNRALVARKGVSVWLDADLPLLWSRVK--GKNTR 133
Query: 176 PLLHQCESGDAYTEALN 192
PLL + + TE N
Sbjct: 134 PLLRTAQPLETLTEIYN 150
>gi|226949197|ref|YP_002804288.1| shikimate kinase [Clostridium botulinum A2 str. Kyoto]
gi|254806773|sp|C1FPC6.1|AROK_CLOBJ RecName: Full=Shikimate kinase; Short=SK
gi|226841126|gb|ACO83792.1| shikimate kinase [Clostridium botulinum A2 str. Kyoto]
Length = 170
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 92/160 (57%), Gaps = 3/160 (1%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE +
Sbjct: 4 IVLIGMPLSGKSTLGRELSKILKYDLIDTDTLIEEMED-KSIKEIFKIYGEDYFREKELK 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ KL V+STGGG N ++K G +V+L VPLE L +R+ D+RPLL
Sbjct: 63 IINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
++ NR+ ++E+ N N + SL I
Sbjct: 123 KNNDTKFLEEMYKNRIE-IYEKAHTIICNTNYKESLITIV 161
>gi|148379860|ref|YP_001254401.1| shikimate kinase [Clostridium botulinum A str. ATCC 3502]
gi|153930849|ref|YP_001384157.1| shikimate kinase [Clostridium botulinum A str. ATCC 19397]
gi|153934761|ref|YP_001387698.1| shikimate kinase [Clostridium botulinum A str. Hall]
gi|168180487|ref|ZP_02615151.1| shikimate kinase [Clostridium botulinum NCTC 2916]
gi|229508975|sp|A7FUV4.1|AROK_CLOB1 RecName: Full=Shikimate kinase; Short=SK
gi|229509144|sp|A5I323.1|AROK_CLOBH RecName: Full=Shikimate kinase; Short=SK
gi|148289344|emb|CAL83440.1| shikimate kinase [Clostridium botulinum A str. ATCC 3502]
gi|152926893|gb|ABS32393.1| shikimate kinase [Clostridium botulinum A str. ATCC 19397]
gi|152930675|gb|ABS36174.1| shikimate kinase [Clostridium botulinum A str. Hall]
gi|182668782|gb|EDT80760.1| shikimate kinase [Clostridium botulinum NCTC 2916]
Length = 170
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 92/160 (57%), Gaps = 3/160 (1%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE +
Sbjct: 4 IVLIGMPLSGKSTLGRELSKILKYDLIDTDTLIEEMED-KSIKEIFKIYGEDYFREKELK 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ KL V+STGGG N ++K G +V+L VPLE L +R+ D+RPLL
Sbjct: 63 IINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
++ NR+ ++E+ N N + SL I
Sbjct: 123 KNNDTKFLEEMYKNRIE-IYEKAHTIICNTNYKESLITIV 161
>gi|255631169|gb|ACU15950.1| unknown [Glycine max]
Length = 230
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 97/164 (59%), Gaps = 4/164 (2%)
Query: 47 KSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFK 106
K+ E+ L G I+LVG+ S KT++GK+L+ L Y +FD D+L+E++V G VA+ F+
Sbjct: 69 KAAEVSSELKGTSIFLVGLKSSLKTSLGKLLADALRYYYFDSDSLVEEAVGGALVAKSFR 128
Query: 107 LYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQR 166
E F E ETEVL++LS M +LVV G G VT N ++ GIS+W+DVPL+ +A+
Sbjct: 129 ESDEKGFYESETEVLKQLSPMGRLVVCAGNGTVTSSTNLALLRHGISLWIDVPLDFVARD 188
Query: 167 IAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANA 210
+ + P + +Y E + L L+++ YA A+A
Sbjct: 189 VIEDKSQFAP--SEISISGSYPE--DELGALYDKYRVGYATADA 228
>gi|224007048|ref|XP_002292484.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972126|gb|EED90459.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 293
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 93/159 (58%), Gaps = 12/159 (7%)
Query: 51 IEPYLSGRCIYLVGMMGSGKTTVGKILSGVLG-YSFFDCDTLIEQSVDGTSVAEIFKLYG 109
+ P L G +Y +GMMGSGK+ VG L+ +G Y+F D D ++E++ G S+ +IF+ G
Sbjct: 96 LSPRLQGCNLYFIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAA-GMSIPKIFQTEG 154
Query: 110 EGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAA 169
E FRE E +VL + + VVSTGGG + R NW +Q G+ V+L V E + +RI
Sbjct: 155 EEAFREAEAQVLDSVHAHVRCVVSTGGGMILRNQNWSKLQTGLVVYLKVEPEVIMKRIE- 213
Query: 170 VGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
GTD RPLL Q E + L L +L EER E Y A
Sbjct: 214 -GTD-RPLL-QTE------DPLETLRSLMEERRERYEQA 243
>gi|421836390|ref|ZP_16270888.1| shikimate kinase, partial [Clostridium botulinum CFSAN001627]
gi|409741753|gb|EKN41438.1| shikimate kinase, partial [Clostridium botulinum CFSAN001627]
Length = 178
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 92/160 (57%), Gaps = 3/160 (1%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE +
Sbjct: 12 IVLIGMPLSGKSTLGRELSKILKYDLIDTDTLIEEMED-KSIKEIFKIYGEDYFREKELK 70
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ KL V+STGGG N ++K G +V+L VPLE L +R+ D+RPLL
Sbjct: 71 IINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRPLL 130
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
++ NR+ ++E+ N N + SL I
Sbjct: 131 KNNDTKFLEEMYKNRIE-IYEKAHTIICNTNYKESLITIV 169
>gi|299473618|emb|CBN78012.1| Shikimate Kinase [Ectocarpus siliculosus]
Length = 224
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 105/179 (58%), Gaps = 11/179 (6%)
Query: 40 EAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLG-YSFFDCDTLIEQSVDG 98
E VL+ ++ E+ L G ++ VGMMG+GK+TV + L+ V+G Y F D DT+IE+ + G
Sbjct: 12 EPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELL-G 70
Query: 99 TSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDV 158
SV E+F GE FR E++VL ++ ++ V+TGGG V+ NW MQ G+ VWLD+
Sbjct: 71 ASVGEVFAKDGEEGFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDM 130
Query: 159 PLEALAQRIAAVGTD--SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLE 215
+ + +R++ + RPLL +GD + +L L E+R YA A+ V L+
Sbjct: 131 EPKDIFERLSKDPEEVAKRPLL----AGD---DPQGKLEELLEKRKPQYAQADVTVQLK 182
>gi|33862436|ref|NP_893996.1| shikimate kinase [Prochlorococcus marinus str. MIT 9313]
gi|81578001|sp|Q7V904.1|AROK_PROMM RecName: Full=Shikimate kinase; Short=SK
gi|33640549|emb|CAE20338.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9313]
Length = 192
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 103/198 (52%), Gaps = 21/198 (10%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L GR +YLVGMM SGK++ G+ L+ L Y F D D +IEQ + G + +IF GE FR
Sbjct: 14 LGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQ-LAGQPIPKIFSEEGEAGFR 72
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E++VL + LVV+TGGG V++P NW + +GI +WL+ E L +R+ A + +
Sbjct: 73 TMESQVLNAIGQRHSLVVATGGGIVSKPENWGVLHQGIVIWLNPGREELLRRLNA-DSGN 131
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
RPLL Q E +A L+ ER Y A+ H +V + P I
Sbjct: 132 RPLL-QTEDPEAA------FDCLFAERLPLYCEADL------------HVEVGAEEPDGI 172
Query: 235 AIEALEQIEGFLKEEDDM 252
A++ +E + L M
Sbjct: 173 ALKIIEFLPQLLSPPPQM 190
>gi|329114346|ref|ZP_08243108.1| 3-dehydroquinate synthase [Acetobacter pomorum DM001]
gi|326696422|gb|EGE48101.1| 3-dehydroquinate synthase [Acetobacter pomorum DM001]
Length = 596
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 110/207 (53%), Gaps = 28/207 (13%)
Query: 37 PIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSV 96
P+D +V ++ I P+ GR I LVG+MG+GKTT+G+ L+ LG F D D IE++
Sbjct: 38 PLDLERVSRSHGSGIIPF--GRSIVLVGLMGAGKTTIGRPLATRLGLPFVDADVEIERAA 95
Query: 97 DGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA----VTRPINWRYMQKGI 152
G S+A++F+LYGE FR+ E V+++L +V++TGGGA TR + ++ +
Sbjct: 96 -GCSIADVFRLYGEAAFRDGERRVIRRLLEGPPMVLATGGGAFMDSTTRAL---VRERAV 151
Query: 153 SVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
S+WL PL L +R++ G RPLL+ D L L R YA A
Sbjct: 152 SIWLRCPLPVLVRRVS--GRTHRPLLNTTSPRDV-------LENLMAIRHPVYAEA---- 198
Query: 213 SLENIAVKLGHKDVSSLTPVTIAIEAL 239
+I V G +V T T +EAL
Sbjct: 199 ---DIIVDCGDNNVEHTT--TRVMEAL 220
>gi|114327280|ref|YP_744437.1| 3-dehydroquinate synthase [Granulibacter bethesdensis CGDNIH1]
gi|114315454|gb|ABI61514.1| shikimate kinase [Granulibacter bethesdensis CGDNIH1]
Length = 590
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 92/157 (58%), Gaps = 11/157 (7%)
Query: 54 YLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFF 113
+L GR I LVG+MG+GKT++G+ L+ LG F D D IE++ G SVAEIF +GE F
Sbjct: 48 WLQGRSIVLVGLMGAGKTSIGRRLAARLGMPFRDADAEIERAA-GCSVAEIFARHGESGF 106
Query: 114 REKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGT 172
R+ E V+++L LV++TGGGA P R +++G +S+WL L L +R++ G
Sbjct: 107 RQGERRVVRRLLSEEPLVLATGGGAFMDPETRRVIREGAVSIWLRCRLPVLLKRVS--GR 164
Query: 173 DSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
RPLL+Q + D L L ER YA A+
Sbjct: 165 THRPLLNQGDPADI-------LQRLMNERHPVYAEAD 194
>gi|339021375|ref|ZP_08645455.1| shikimate kinase [Acetobacter tropicalis NBRC 101654]
gi|338751539|dbj|GAA08759.1| shikimate kinase [Acetobacter tropicalis NBRC 101654]
Length = 588
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 113/209 (54%), Gaps = 26/209 (12%)
Query: 37 PIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSV 96
P+D +V +S + P SGR I LVG+MG+GKTT+G+ L+ LG F D D IE++
Sbjct: 30 PLDLERVGNRQSTGLIP--SGRSIVLVGLMGAGKTTIGRRLATRLGLPFVDADIEIERAA 87
Query: 97 DGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGI 152
G S+A++F+LYGE FR+ E V+++L +V++TGGGA TR + ++ I
Sbjct: 88 -GCSIADVFRLYGEAAFRDGERRVIRRLLEGPPMVLATGGGAYMDASTRSL---VRERAI 143
Query: 153 SVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
S+WL PL L +R+ G + RPLL++ D L RL T+ R YA A
Sbjct: 144 SIWLRCPLPVLLRRVQ--GRNHRPLLNEAPPRD----VLARLMTV---RHPIYAEA---- 190
Query: 213 SLENIAVKLGHKDVSSLTPVTIAIEALEQ 241
+I V G +V T I AL +
Sbjct: 191 ---DIIVDCGDHNVDHSTSRVIEAMALSR 216
>gi|153938735|ref|YP_001391221.1| shikimate kinase [Clostridium botulinum F str. Langeland]
gi|384462240|ref|YP_005674835.1| shikimate kinase [Clostridium botulinum F str. 230613]
gi|238686689|sp|A7GEL1.1|AROK_CLOBL RecName: Full=Shikimate kinase; Short=SK
gi|152934631|gb|ABS40129.1| shikimate kinase [Clostridium botulinum F str. Langeland]
gi|295319257|gb|ADF99634.1| shikimate kinase [Clostridium botulinum F str. 230613]
Length = 170
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 87/152 (57%), Gaps = 10/152 (6%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE E
Sbjct: 4 IVLIGMPLSGKSTLGRELSKILKYDLIDTDTLIEEMED-KSIKEIFKIYGEDYFREKELE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ K V+STGGG N ++K G +V+L VPLE L +R+ D+RPLL
Sbjct: 63 IINKFKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANA 210
++ L +++ R E Y A+
Sbjct: 123 KNNDT--------KFLEEMYKNRIEIYEKAHT 146
>gi|157412463|ref|YP_001483329.1| shikimate kinase [Prochlorococcus marinus str. MIT 9215]
gi|157387038|gb|ABV49743.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9215]
Length = 185
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 104/182 (57%), Gaps = 17/182 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ GR I+L+GMMGSGK+ G L+ +L Y + D DTLIE+ + S+ +IFK GE FR
Sbjct: 13 IKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLIEK-LAKKSINQIFKDEGEDNFR 71
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E E L++ + LV+STGGG VT+ NW +++GI W+D+ + +R+ ++
Sbjct: 72 ELEANCLKETIKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLEKDIAIERLKN-EIEN 130
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL---GHKDV 226
RPLL D Y ++++ R Y+ A+ R+ ++E +A+K+ HK++
Sbjct: 131 RPLLQGKNLNDLYM-------SIFQSRENLYSQADLRIQVKKENIEEVAMKIINAIHKEI 183
Query: 227 SS 228
S
Sbjct: 184 IS 185
>gi|170758536|ref|YP_001787227.1| shikimate kinase [Clostridium botulinum A3 str. Loch Maree]
gi|238688746|sp|B1KT67.1|AROK_CLOBM RecName: Full=Shikimate kinase; Short=SK
gi|169405525|gb|ACA53936.1| shikimate kinase [Clostridium botulinum A3 str. Loch Maree]
Length = 170
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 88/152 (57%), Gaps = 10/152 (6%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE +
Sbjct: 4 IILIGMPLSGKSTLGRELSKILKYDLIDTDTLIEEMED-KSIKEIFKIYGEDYFREKELK 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ KL V+STGGG N ++K G +V+L VPLE L +R+ D+RPLL
Sbjct: 63 IINKLKKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEDDARPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANA 210
++ L +++ R E Y A+
Sbjct: 123 KNDDT--------KFLEEMYKNRIEIYEKAHT 146
>gi|308811598|ref|XP_003083107.1| AROK_SYNY3 Shikimate kinase (ISS) [Ostreococcus tauri]
gi|116054985|emb|CAL57062.1| AROK_SYNY3 Shikimate kinase (ISS) [Ostreococcus tauri]
Length = 272
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 112/210 (53%), Gaps = 17/210 (8%)
Query: 47 KSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFK 106
+ + + L G ++L+G+MG+GK+TVG L+ +GY D D LI Q V + AE+F
Sbjct: 43 RGRAVADKLVGTSVFLIGIMGTGKSTVGAALAKAMGYKHLDTDELI-QGVTKKTPAELFA 101
Query: 107 LYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQR 166
GE FR E+ +L +++ + VVSTGGG V NW ++ G++V L E LA+R
Sbjct: 102 ELGESEFRAIESLILAEVAAYKNCVVSTGGGIVCERTNWMHLHNGVTVRLHGENELLAKR 161
Query: 167 IAAVGTDSRPLLHQCESGDAYTEA------LNRLSTLWEERGEAYANANARVSLENIAVK 220
+ A G + RPLL E G++ E+ + R+ L E R Y A ++ V
Sbjct: 162 VLADGVEKRPLL-ASEGGESDDESEQMARVVARIEKLLEARESMYKQA-------DLTVP 213
Query: 221 LGHKDVSSLTPVTIAIEA-LEQIEGFLKEE 249
LG +D + PV + I+ LE ++ + E+
Sbjct: 214 LGSRDDAG-APVDVVIDRILEALDARVSED 242
>gi|170757837|ref|YP_001781450.1| shikimate kinase [Clostridium botulinum B1 str. Okra]
gi|429246201|ref|ZP_19209543.1| shikimate kinase [Clostridium botulinum CFSAN001628]
gi|229509262|sp|B1IMQ2.1|AROK_CLOBK RecName: Full=Shikimate kinase; Short=SK
gi|169123049|gb|ACA46885.1| shikimate kinase [Clostridium botulinum B1 str. Okra]
gi|428756805|gb|EKX79335.1| shikimate kinase [Clostridium botulinum CFSAN001628]
Length = 170
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 86/152 (56%), Gaps = 10/152 (6%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE E
Sbjct: 4 IVLIGMPLSGKSTLGRELSKILKYDLIDTDTLIEEMED-KSIKEIFKIYGEDYFREKELE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ KL V+STGGG N + G +V+L VPLE L +R+ D+RPLL
Sbjct: 63 IINKLKKESNKVISTGGGLPIYNKNIYELKNIGFTVYLKVPLEELIKRMVKKEYDTRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANA 210
++ L +++ R E Y A+
Sbjct: 123 KNNDT--------KFLEEMYKNRIEIYEKAHT 146
>gi|421848539|ref|ZP_16281527.1| shikimate kinase [Acetobacter pasteurianus NBRC 101655]
gi|421851731|ref|ZP_16284424.1| shikimate kinase [Acetobacter pasteurianus subsp. pasteurianus LMG
1262 = NBRC 106471]
gi|371460900|dbj|GAB26730.1| shikimate kinase [Acetobacter pasteurianus NBRC 101655]
gi|371480234|dbj|GAB29627.1| shikimate kinase [Acetobacter pasteurianus subsp. pasteurianus LMG
1262 = NBRC 106471]
Length = 588
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 110/207 (53%), Gaps = 28/207 (13%)
Query: 37 PIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSV 96
P+D +V ++ I P+ GR I LVG+MG+GKTT+G+ L+ LG F D D IE++
Sbjct: 30 PLDLERVSRSHGSGIIPF--GRSIVLVGLMGAGKTTIGRPLATRLGLPFVDADVEIERAA 87
Query: 97 DGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA----VTRPINWRYMQKGI 152
G S+A++F+LYGE FR+ E V+++L +V++TGGGA TR + ++ +
Sbjct: 88 -GCSIADVFRLYGEAAFRDGERRVIRRLLEGPPMVLATGGGAFMDSTTRAL---VRERAV 143
Query: 153 SVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
S+WL PL L +R++ G RPLL+ T L L R YA A
Sbjct: 144 SIWLRCPLPVLVRRVS--GRTHRPLLNT-------TSPREVLENLMAIRHPVYAEA---- 190
Query: 213 SLENIAVKLGHKDVSSLTPVTIAIEAL 239
+I V G +V T T +EAL
Sbjct: 191 ---DIIVDCGDNNVEHTT--TRVMEAL 212
>gi|258541882|ref|YP_003187315.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-01]
gi|384041803|ref|YP_005480547.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-12]
gi|384050318|ref|YP_005477381.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-03]
gi|384053428|ref|YP_005486522.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-07]
gi|384056660|ref|YP_005489327.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-22]
gi|384059301|ref|YP_005498429.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-26]
gi|384062595|ref|YP_005483237.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-32]
gi|384118671|ref|YP_005501295.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256632960|dbj|BAH98935.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-01]
gi|256636017|dbj|BAI01986.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-03]
gi|256639072|dbj|BAI05034.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-07]
gi|256642126|dbj|BAI08081.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-22]
gi|256645181|dbj|BAI11129.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-26]
gi|256648236|dbj|BAI14177.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-32]
gi|256651289|dbj|BAI17223.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654280|dbj|BAI20207.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-12]
Length = 577
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 110/207 (53%), Gaps = 28/207 (13%)
Query: 37 PIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSV 96
P+D +V ++ I P+ GR I LVG+MG+GKTT+G+ L+ LG F D D IE++
Sbjct: 19 PLDLERVSRSHGSGIIPF--GRSIVLVGLMGAGKTTIGRPLATRLGLPFVDADVEIERAA 76
Query: 97 DGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA----VTRPINWRYMQKGI 152
G S+A++F+LYGE FR+ E V+++L +V++TGGGA TR + ++ +
Sbjct: 77 -GCSIADVFRLYGEAAFRDGERRVIRRLLEGPPMVLATGGGAFMDSTTRAL---VRERAV 132
Query: 153 SVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
S+WL PL L +R++ G RPLL+ T L L R YA A
Sbjct: 133 SIWLRCPLPVLVRRVS--GRTHRPLLNT-------TSPREVLENLMAIRHPVYAEA---- 179
Query: 213 SLENIAVKLGHKDVSSLTPVTIAIEAL 239
+I V G +V T T +EAL
Sbjct: 180 ---DIIVDCGDNNVEHTT--TRVMEAL 201
>gi|323138458|ref|ZP_08073527.1| 3-dehydroquinate synthase [Methylocystis sp. ATCC 49242]
gi|322396254|gb|EFX98786.1| 3-dehydroquinate synthase [Methylocystis sp. ATCC 49242]
Length = 604
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 94/177 (53%), Gaps = 10/177 (5%)
Query: 37 PIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSV 96
P VL + I L GR I LVGMMGSGK+ +G+ L+ +G F D D I +
Sbjct: 11 PAPPPGVLDERVPAILAGLGGRAIVLVGMMGSGKSAIGQRLAARVGLPFVDADAEIVAAA 70
Query: 97 DGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRP-INWRYMQKGISVW 155
G S+ EIF YGE +FR+ E V+ +L Q+V++TGGGA P R ++G+S+W
Sbjct: 71 AGMSIPEIFAKYGERYFRDGERRVIMRLLNSGQIVLATGGGAFMDPRTRERIAERGVSLW 130
Query: 156 LDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
LD L+ L +R+ + RPLLH D E L R L E R Y A+ RV
Sbjct: 131 LDADLKTLMKRVRR--KNDRPLLHT----DDPEETLRR---LLEARRPIYELADIRV 178
>gi|284929680|ref|YP_003422202.1| shikimate kinase [cyanobacterium UCYN-A]
gi|284810124|gb|ADB95821.1| shikimate kinase [cyanobacterium UCYN-A]
Length = 183
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 90/158 (56%), Gaps = 9/158 (5%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L G I+L+GMMGSGKTT GK L+ L Y FFD DTLI+Q V ++++IF GE FR
Sbjct: 6 LQGINIFLIGMMGSGKTTTGKRLAEHLNYRFFDTDTLIKQ-VKQKTISDIFVEEGEESFR 64
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E+ VL +L+ + V++TGGG V + NW Y+ G+ +WLD + L +R+ S
Sbjct: 65 ILESNVLSELASCTRSVIATGGGIVLKQENWSYLHHGLIIWLDTSIPILKKRLNH-DLSS 123
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
RPL+ Q E D L L ++R Y + ++
Sbjct: 124 RPLI-QKEKLDI------ELELLLKQRHALYKQGDLKI 154
>gi|430376185|ref|ZP_19430588.1| shikimate kinase [Moraxella macacae 0408225]
gi|429541416|gb|ELA09444.1| shikimate kinase [Moraxella macacae 0408225]
Length = 196
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 104/187 (55%), Gaps = 21/187 (11%)
Query: 59 CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKET 118
I L+G MG+GKTT+GK+L+ LGY FFD D IE+ V G SV+ IF GE FR++E+
Sbjct: 9 LIVLIGPMGAGKTTIGKLLASQLGYRFFDSDHEIER-VSGASVSWIFDKEGEMGFRQRES 67
Query: 119 EVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
L +L+ +Q+V++TGGGAV P+N Y+++GI ++L ++ +R +RPLL
Sbjct: 68 RTLDELTQCQQVVLATGGGAVMTPLNQAYLKRGIVIYLKAQVDIQYER--TYKDKNRPLL 125
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
+L+ L+ R Y SL +I V G+ L+P + E
Sbjct: 126 QTQNPK-------QKLADLFAIRDPIYQ------SLADIVVTTGY-----LSPKKMIKEI 167
Query: 239 LEQIEGF 245
L Q++GF
Sbjct: 168 LWQLQGF 174
>gi|349573635|ref|ZP_08885611.1| shikimate kinase [Neisseria shayeganii 871]
gi|348014794|gb|EGY53662.1| shikimate kinase [Neisseria shayeganii 871]
Length = 182
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 91/150 (60%), Gaps = 13/150 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L+G+MG+GKTT GK L+ +L Y F D D I Q G S+A IF+L GE FR +ET
Sbjct: 11 IFLIGLMGAGKTTQGKRLASLLHYPFIDSDQEIVQRT-GVSIATIFELEGENGFRNRETA 69
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTD-SRPL 177
V+ +LS R +V++TGGGAV R N Y++ +G V+L E L QR V TD SRPL
Sbjct: 70 VIDELSRRRPVVLATGGGAVLREENRGYLKSRGTVVYLHAVPEVLYQR---VKTDKSRPL 126
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYAN 207
L T+ L +LS L+++R Y +
Sbjct: 127 LQ-------VTDPLGKLSELYQQRDPLYRD 149
>gi|444921588|ref|ZP_21241423.1| Shikimate kinase [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507315|gb|ELV07492.1| Shikimate kinase [Wohlfahrtiimonas chitiniclastica SH04]
Length = 188
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 89/150 (59%), Gaps = 11/150 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+LVG MG GKTTVG+ L+ LG+SF D D IE G S+A++F GE FR+ ET+
Sbjct: 7 FFLVGPMGVGKTTVGQALAEQLGFSFIDSDAYIENQA-GQSIADLFATQGEVAFRDLETK 65
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+ LSL+ +V+STGGGA+ R +N Y++ +G ++LD+ A+ +RI G +RPLL
Sbjct: 66 AIDALSLLPNIVLSTGGGAILRDVNRDYLKSRGTVIFLDLAPSAIFERIK--GDQTRPLL 123
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANA 208
T L L +++ER Y +A
Sbjct: 124 KT-------TSPLGTLQNIYDERHPIYLDA 146
>gi|345857868|ref|ZP_08810286.1| shikimate kinase family protein [Desulfosporosinus sp. OT]
gi|344328955|gb|EGW40315.1| shikimate kinase family protein [Desulfosporosinus sp. OT]
Length = 177
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 99/185 (53%), Gaps = 22/185 (11%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I L+G MG+GK+TVGK L+ L + F D D I + V SV EIF+ +GE FR +E
Sbjct: 2 RNIVLIGFMGTGKSTVGKRLAQSLAWDFVDTDCEIGE-VTNLSVTEIFRRHGETRFRSEE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
V+ +LS Q+V++TGGG V P+NW + Q GI + L LEA+ RI TD RP
Sbjct: 61 RIVVARLSQQEQIVIATGGGTVLNPLNWEALAQNGIVIALHASLEAIISRIGH-KTD-RP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS---------LENIAVKLGHKDVS 227
LL EA+ + LW ER E YA A+ V + I +LG ++ +
Sbjct: 119 LLK------GSKEAIEK---LWSERQECYAQADFTVDTTEKNIDEVVNEILARLGRRNNN 169
Query: 228 SLTPV 232
+ V
Sbjct: 170 EFSGV 174
>gi|188996471|ref|YP_001930722.1| Shikimate kinase [Sulfurihydrogenibium sp. YO3AOP1]
gi|254806783|sp|B2V895.1|AROK_SULSY RecName: Full=Shikimate kinase; Short=SK
gi|188931538|gb|ACD66168.1| Shikimate kinase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 166
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 86/157 (54%), Gaps = 13/157 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ IYLVG MGSGK+TVGKIL+ L F D D LIE+ +G + +IF+ GE +FRE E
Sbjct: 2 KNIYLVGFMGSGKSTVGKILAEKLNMKFVDIDKLIEEK-EGMKIKDIFEQKGESYFRELE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+ ++ + LVVSTGGG N M+K G VWLDV L + R+ RP
Sbjct: 61 RKQIEAIVNQEGLVVSTGGGLGANLNNMNLMKKNGDVVWLDVSLNTVLDRLK--NDQDRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
LL Q + ++ L+EER Y AN R++
Sbjct: 119 LLKQ---------PIEKIKQLFEERKNVYRLANIRIN 146
>gi|304319750|ref|YP_003853393.1| shikimate kinase [Parvularcula bermudensis HTCC2503]
gi|303298653|gb|ADM08252.1| putative shikimate kinase [Parvularcula bermudensis HTCC2503]
Length = 188
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 103/174 (59%), Gaps = 12/174 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R + L+G+MG+GKTTVG+ L+ +L F D D IE + + SVA+IF+ YGEG+FRE E
Sbjct: 15 RPVVLIGLMGAGKTTVGRRLAELLALPFKDADEEIEDAAN-MSVADIFETYGEGYFREGE 73
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
+V+++L +V++TGGGA ++ K IS+WL L+ L +R A T RP
Sbjct: 74 RKVIERLLSEGPMVLATGGGAFMNAATRELVKLKAISIWLRADLDLLVKRTAQKAT--RP 131
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARV-SLENIAVKLGHKDVSSL 229
LL Q GDA E L R L +ER YA A+ V SLE +K ++ + +L
Sbjct: 132 LLQQ---GDAR-EILAR---LLKERAPVYAEADIVVDSLEGPHLKTVNRIIKAL 178
>gi|354558141|ref|ZP_08977397.1| Shikimate kinase [Desulfitobacterium metallireducens DSM 15288]
gi|353548866|gb|EHC18310.1| Shikimate kinase [Desulfitobacterium metallireducens DSM 15288]
Length = 175
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 103/191 (53%), Gaps = 25/191 (13%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MG+GKT+VGK L+ LG+ F D D IE+ + GTSV+EIF+ +GE FR +ET
Sbjct: 6 IVLIGFMGTGKTSVGKRLAKHLGWDFLDTDLAIEE-ISGTSVSEIFRKHGETRFRSEETV 64
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWR-YMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++++L +++V++TGGG P NW + + GI + L P++ + RI G + RPLL
Sbjct: 65 LVKRLKERKKMVIATGGGTPLNPENWEAFTEIGIIISLYAPIDTILDRIG--GKNDRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
E + LW R Y A+ + D + L +A E
Sbjct: 123 R---------EGRDEAQKLWLSRQPIYNQADLII------------DTTELDIDEVANEI 161
Query: 239 LEQIEGFLKEE 249
L +IEG +++E
Sbjct: 162 LGKIEGRIEDE 172
>gi|162147968|ref|YP_001602429.1| bifunctional protein: shikimate kinase and 3-dehydroquinate
synthase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542585|ref|YP_002274814.1| 3-dehydroquinate synthase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786545|emb|CAP56127.1| putative bifunctional protein: shikimate kinase and
3-dehydroquinate synthase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530262|gb|ACI50199.1| 3-dehydroquinate synthase [Gluconacetobacter diazotrophicus PAl 5]
Length = 591
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 96/177 (54%), Gaps = 14/177 (7%)
Query: 40 EAQVLKNKSQEIEPYLSG---RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSV 96
+A V ++ P G R + LVG+MG+GKTT+G+ ++ LG F D D IE++
Sbjct: 31 DALVAADRPDRPGPRAPGPHERSVVLVGLMGAGKTTIGRRIAARLGMPFVDADVEIERAA 90
Query: 97 DGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVW 155
G S+A++F+ YGE FR+ E V++++ LV++TGGGA P+ ++ + SVW
Sbjct: 91 -GCSIADLFRRYGEAEFRKGEHRVIRRILSGHPLVLATGGGAFMDPVTRAVIRDRATSVW 149
Query: 156 LDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
L PL L +R+ G RPLL++ D L+ L E R YA AN V
Sbjct: 150 LRCPLPVLVRRVQ--GRTHRPLLNEGNPRDI-------LAALMEIRHPVYAEANITV 197
>gi|449019708|dbj|BAM83110.1| shikimate kinase [Cyanidioschyzon merolae strain 10D]
Length = 287
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 49 QEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLY 108
Q++ L G +YLVGMMGSGK+T+G L+ L Y+F D D +IE+++ S+ EIF
Sbjct: 77 QQLREKLHGASVYLVGMMGSGKSTLGAYLAKALEYAFIDTDVIIERTLQ-KSIPEIFAQD 135
Query: 109 GEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIA 168
GE FR+ E+ VL+ L + VV+TGGG V R NW + G+ V+L+ + LA+R+
Sbjct: 136 GEETFRDVESLVLESLQSHVRTVVATGGGVVLRQRNWGTLHTGLVVYLNGTPDMLAKRVQ 195
Query: 169 AVGTDSRPLLHQCESGDAYT--------EALN-RLSTLWEERGEAYANANARVSL 214
G RPLL A + EAL+ RL+ + ER Y A+ V L
Sbjct: 196 --GGAGRPLLSNTMHAPADSTIPEPAAIEALSARLAEILSEREHFYRQADVTVEL 248
>gi|78778496|ref|YP_396608.1| shikimate kinase [Prochlorococcus marinus str. MIT 9312]
gi|78711995|gb|ABB49172.1| shikimate kinase [Prochlorococcus marinus str. MIT 9312]
Length = 185
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 102/182 (56%), Gaps = 17/182 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ GR I+L+GMMG GK+ G L+ +L Y + D D+LIE+ + S+ +IF GE FR
Sbjct: 13 IKGRSIFLIGMMGCGKSQTGLKLAELLKYKYIDLDSLIEK-LAKKSINQIFNDEGEDNFR 71
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ET L++ + LV+STGGG VT+ NW +++GI W+D+ + +R+ ++
Sbjct: 72 ELETSCLKETIKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLDKDIAIERLKN-EIEN 130
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN-----IAVKL---GHKDV 226
RPLL D Y L + R Y+ A+ R+ ++N +A+K+ HK++
Sbjct: 131 RPLLQGKNLNDLYMSIL-------KSRENLYSQADLRIQVKNENIEEVAIKIINAMHKEI 183
Query: 227 SS 228
++
Sbjct: 184 NN 185
>gi|123967661|ref|YP_001008519.1| shikimate kinase [Prochlorococcus marinus str. AS9601]
gi|123197771|gb|ABM69412.1| Shikimate kinase [Prochlorococcus marinus str. AS9601]
Length = 185
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 103/182 (56%), Gaps = 17/182 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L GR I+L+GMMGSGK+ G L+ +L Y + D D+LIE+ + S+ +IF GE FR
Sbjct: 13 LKGRSIFLIGMMGSGKSKTGLKLAELLKYKYIDLDSLIEK-LAKKSINQIFNDEGEEKFR 71
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E E L++ + LV+STGGG VT+ NW +++GI W+D+ + +R+ ++
Sbjct: 72 ELEANCLKETIKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLDKDIAIERLKN-EIEN 130
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL---GHKDV 226
RPLL D Y ++++ R Y+ A+ R+ ++E +A+K+ HK++
Sbjct: 131 RPLLQGKNLNDLYM-------SIFQSRENLYSQADLRIQVKRENIEEVAMKIINAIHKEI 183
Query: 227 SS 228
S
Sbjct: 184 IS 185
>gi|163869347|ref|YP_001610603.1| shikimate kinase [Bartonella tribocorum CIP 105476]
gi|161019050|emb|CAK02608.1| Shikimate kinase [Bartonella tribocorum CIP 105476]
Length = 196
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 29/213 (13%)
Query: 35 HAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQ 94
H PI + + ++I L + + VG+MG+GK+ +GK ++ +L F+D D IE+
Sbjct: 8 HPPISQIK------RQILSSLDNQALVFVGLMGAGKSVIGKRVATMLDLPFYDSDQEIEK 61
Query: 95 SVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGIS 153
+ S+ EIFK+YGEG FR E ++ L R LV++TGGGA + + I Q GI
Sbjct: 62 AAQ-MSITEIFKIYGEGEFRSLEQRIIFNLIKKRPLVLATGGGAYINQEIRKTIHQNGIP 120
Query: 154 VWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
+WL L+ L QR++ T RPLL + + L E+R YA AN ++
Sbjct: 121 IWLKADLDILMQRVSKRPT--RPLLQTANPKET-------MQKLMEQRYPLYAKANVTIN 171
Query: 214 LENIAVKLGHKDVSSLTPVTIAIEALEQIEGFL 246
HK+ +P ++A + ++ +L
Sbjct: 172 --------SHKE----SPHSVAKNVIRSLQHYL 192
>gi|83951801|ref|ZP_00960533.1| shikimate kinase [Roseovarius nubinhibens ISM]
gi|83836807|gb|EAP76104.1| shikimate kinase [Roseovarius nubinhibens ISM]
Length = 196
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 90/153 (58%), Gaps = 11/153 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + +VGMMG+GKT VG+ L+ LG F D D IE + S+AEIF+ GE FFR++E
Sbjct: 21 KTVVMVGMMGAGKTAVGRALATRLGVPFLDSDAEIEAAAT-MSIAEIFERDGEAFFRDRE 79
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
TEV+ +L ++ ++STGGGA N + + QKG+SVWLD L+ L R+ ++RP
Sbjct: 80 TEVIDRLLENQRGILSTGGGAFLSERNRQIISQKGVSVWLDADLDLLWSRVKH--KNTRP 137
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LL + L TL+E R +Y A+
Sbjct: 138 LLRTANPRET-------LKTLYEARVPSYRKAD 163
>gi|126695461|ref|YP_001090347.1| shikimate kinase [Prochlorococcus marinus str. MIT 9301]
gi|126542504|gb|ABO16746.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9301]
Length = 185
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 14/172 (8%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ GR I+L+GMMGSGK+ G L+ +L Y + D DTLIE+ + S+ +IF GE FR
Sbjct: 13 IKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLIEK-LAKKSINQIFNDEGEDNFR 71
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E E L++ + LV+STGGG VT+ NW +++GI W+D+ + +R+ +
Sbjct: 72 ELEANCLKETIKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLDKDIAIERLKN-EIKN 130
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 221
RPLL D Y ++++ R Y+ A+ R+ ++E +A+K+
Sbjct: 131 RPLLQGKNLNDLYM-------SIFQSRENLYSQADLRIQVKKENIEEVALKI 175
>gi|145357115|ref|XP_001422768.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583011|gb|ABP01085.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 170
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 97/174 (55%), Gaps = 11/174 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L+ ++L+G+MGSGK+TVG L+ LGY+ D D LI +SV + +E+F GE FR
Sbjct: 5 LADTSLFLIGIMGSGKSTVGASLAKALGYNHLDTDELI-KSVTKKTPSELFAEAGESEFR 63
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E+ +L +++ ++ V+STGGG V NW ++ G++V L E LA+R+ A G +
Sbjct: 64 AIESMILAEVAAYKRCVISTGGGIVCEKTNWMHLHNGVTVRLHGDSELLARRVLADGVEK 123
Query: 175 RPLLHQCESGD---AYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKD 225
RPLL SG+ + +++ L E R Y A +I V LG +D
Sbjct: 124 RPLLSGDTSGEEQPTIDSIVAKINALLETRETMYKQA-------DITVPLGARD 170
>gi|81702041|sp|Q74BL5.1|AROK_GEOSL RecName: Full=Shikimate kinase; Short=SK
Length = 175
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 90/157 (57%), Gaps = 11/157 (7%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
GR + L G MG+GK+TVGK+L+ LGY F D D LI + G S+ EIF+ YGE FRE
Sbjct: 7 GRNVVLTGFMGTGKSTVGKLLARRLGYRFSDLDALIVERA-GISINEIFERYGEQRFREL 65
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSR 175
ETE ++ L + VV+TGGGAV P N +++ G+ V L LE + R+ G R
Sbjct: 66 ETEAIRSLGGVSGRVVATGGGAVIAPRNRVLLREAGLVVNLTASLEVILSRLK--GDRER 123
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
PLL + +A L+ L R AYA+A+ R+
Sbjct: 124 PLLKSNNTPEA-------LAALMTARENAYADADLRI 153
>gi|237756169|ref|ZP_04584738.1| shikimate kinase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691676|gb|EEP60715.1| shikimate kinase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 166
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 87/157 (55%), Gaps = 13/157 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ IYLVG MGSGK+TVGKIL+ L +F D D IE+ +G + +IF+ GE +FRE E
Sbjct: 2 KNIYLVGFMGSGKSTVGKILAEKLNMNFIDIDKFIEEK-EGMKIKDIFEQKGESYFRELE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+ ++ + LVVSTGGG N M+K G VWLDV L + R+ RP
Sbjct: 61 RKQIEAIVNQEGLVVSTGGGLGANLDNMNLMKKNGDVVWLDVSLNTVLDRLK--NDQDRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
LL Q TE ++ L+EER Y AN R++
Sbjct: 119 LLKQP------TE---KIKQLFEERKNVYRLANIRIN 146
>gi|83590399|ref|YP_430408.1| shikimate kinase [Moorella thermoacetica ATCC 39073]
gi|115312153|sp|Q2RI74.1|AROK_MOOTA RecName: Full=Shikimate kinase; Short=SK
gi|83573313|gb|ABC19865.1| shikimate kinase [Moorella thermoacetica ATCC 39073]
Length = 173
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 80/127 (62%), Gaps = 4/127 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MGSGKTTVG++L+ LG+SF D DT++E+ + G V EIF GE FFRE E E
Sbjct: 5 IVLIGFMGSGKTTVGRLLARDLGWSFLDTDTMVEERL-GLPVKEIFAREGEEFFREVEKE 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGIS-VWLDVPLEALAQRIAAVGTDSRPLL 178
+ +++ RQ V++TGGGAV +N + +++G VWL V E +R DSRPLL
Sbjct: 64 AVARVATARQAVIATGGGAVLCGVNVKLLREGNKVVWLQVRPETALKRAGL--DDSRPLL 121
Query: 179 HQCESGD 185
E D
Sbjct: 122 QGREPRD 128
>gi|84516060|ref|ZP_01003420.1| putative shikimate kinase [Loktanella vestfoldensis SKA53]
gi|84509756|gb|EAQ06213.1| putative shikimate kinase [Loktanella vestfoldensis SKA53]
Length = 185
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 88/160 (55%), Gaps = 11/160 (6%)
Query: 54 YLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFF 113
Y R + LVGMMGSGKT +G+ L+ L F D DT IE++ S+AEIF GE FF
Sbjct: 7 YRLKRSVVLVGMMGSGKTAIGRSLASTLHVPFVDSDTAIEEAA-ALSIAEIFARDGEAFF 65
Query: 114 REKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGT 172
R +ETEVL++L ++STGGGA N + + I+VWLD L L +R+
Sbjct: 66 RRRETEVLRRLLAGGAQIISTGGGAFLAAENRDMIARDAIAVWLDADLNTLWERVR--HK 123
Query: 173 DSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
D+RPLL + L+ L ++R + YA A R+
Sbjct: 124 DTRPLLRTPDPK-------GTLTRLLDQRRDVYALAGLRL 156
>gi|146277569|ref|YP_001167728.1| shikimate kinase [Rhodobacter sphaeroides ATCC 17025]
gi|145555810|gb|ABP70423.1| shikimate kinase [Rhodobacter sphaeroides ATCC 17025]
Length = 180
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 94/170 (55%), Gaps = 16/170 (9%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + +VGMMG+GKT VG L+ L F D D IE++ + T +AEIF GE FFREKE
Sbjct: 6 KTVVMVGMMGAGKTAVGTALARALAVPFLDSDEEIERAANRT-IAEIFARDGEPFFREKE 64
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
++VL +L V+STGGGA N R + ++G+SVWL LE L QR+ T RP
Sbjct: 65 SQVLTRLLKGTPCVLSTGGGAFMAEANRRMIREQGVSVWLKADLEVLWQRVRHKAT--RP 122
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 221
LL + + L L E R YA A+ V ++E +AV++
Sbjct: 123 LLRKPNPRET-------LRALLEARDPVYAQADLVVESGEGTVEQMAVRV 165
>gi|400756587|ref|NP_953075.2| shikimate kinase [Geobacter sulfurreducens PCA]
gi|409912549|ref|YP_006891014.1| shikimate kinase [Geobacter sulfurreducens KN400]
gi|307634966|gb|ADI84860.2| shikimate kinase [Geobacter sulfurreducens KN400]
gi|399107898|gb|AAR35402.2| shikimate kinase [Geobacter sulfurreducens PCA]
Length = 181
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 90/157 (57%), Gaps = 11/157 (7%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
GR + L G MG+GK+TVGK+L+ LGY F D D LI + G S+ EIF+ YGE FRE
Sbjct: 13 GRNVVLTGFMGTGKSTVGKLLARRLGYRFSDLDALIVERA-GISINEIFERYGEQRFREL 71
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSR 175
ETE ++ L + VV+TGGGAV P N +++ G+ V L LE + R+ G R
Sbjct: 72 ETEAIRSLGGVSGRVVATGGGAVIAPRNRVLLREAGLVVNLTASLEVILSRLK--GDRER 129
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
PLL + +A L+ L R AYA+A+ R+
Sbjct: 130 PLLKSNNTPEA-------LAALMTARENAYADADLRI 159
>gi|312115311|ref|YP_004012907.1| shikimate kinase [Rhodomicrobium vannielii ATCC 17100]
gi|311220440|gb|ADP71808.1| Shikimate kinase [Rhodomicrobium vannielii ATCC 17100]
Length = 212
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 87/141 (61%), Gaps = 4/141 (2%)
Query: 39 DEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDG 98
+EA LK ++ + L + + LVGMMGSGK+++G+ L+ L F D D IE + G
Sbjct: 5 NEAGGLKPMAKAVRHALGRQSVILVGMMGSGKSSIGRRLATALDLPFHDADAEIETAA-G 63
Query: 99 TSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLD 157
++ E+F+ +GEG+FR+ E V+++L V+STGGG+V P + + G+S+WL
Sbjct: 64 MTIEEMFRTHGEGYFRDGEERVIRRLLQSGSQVLSTGGGSVISPATRAEIARGGVSIWLH 123
Query: 158 VPLEALAQRIAAVGTDSRPLL 178
PL+ L QR++ D+RPLL
Sbjct: 124 APLDLLLQRVSR--RDNRPLL 142
>gi|338730285|ref|YP_004659677.1| 3-dehydroquinate synthase [Thermotoga thermarum DSM 5069]
gi|335364636|gb|AEH50581.1| 3-dehydroquinate synthase [Thermotoga thermarum DSM 5069]
Length = 547
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 111/200 (55%), Gaps = 20/200 (10%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + L G+ GSGKTTVGKIL+ LG+ F D D L+E + + +IF++YGE FR+ E
Sbjct: 3 KSVVLCGLSGSGKTTVGKILAEKLGWFFIDTDQLVEDTT-SMDIPKIFQIYGEEGFRQFE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTDSRP 176
++++K+ ++ +V+S G GAVT+ N ++K + V+L+ P++ L R+ SRP
Sbjct: 62 KQMVEKVCKLQNVVISIGAGAVTKNENVDLLKKNCVVVFLNAPIDILVARLE--NDSSRP 119
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAI 236
LL+ + +E N+L L ++R Y + +I V +SL P IA
Sbjct: 120 LLNSANT----SEKRNKLEVLQKQREPIYR------QIADITVD------ASLQPEKIAR 163
Query: 237 EALEQIEGFLKEEDDMAIAG 256
E ++E + EE ++ I G
Sbjct: 164 EIARKLESYGLEERNLDIEG 183
>gi|254430567|ref|ZP_05044270.1| shikimate kinase [Cyanobium sp. PCC 7001]
gi|197625020|gb|EDY37579.1| shikimate kinase [Cyanobium sp. PCC 7001]
Length = 191
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 73 VGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVV 132
+G L+ LGY F D DT++EQ+ G +AEIF GE FRE ET VL+++S LVV
Sbjct: 1 MGAPLADALGYRFVDADTVLEQAA-GRGIAEIFAEDGEAGFRELETAVLEQISSWHSLVV 59
Query: 133 STGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+TGGG VTRP NW ++ +G+ VWLD P E L R+ T RPLL
Sbjct: 60 ATGGGVVTRPRNWGHLHQGVVVWLDAPAELLLNRLRQDPT-PRPLL 104
>gi|357134333|ref|XP_003568772.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 273
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 109/198 (55%), Gaps = 7/198 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IY+VG + K + K+L+ + Y + D L+E + G FK E + E ETE
Sbjct: 79 IYVVGTDCAAKRNIAKLLANCIIYRYLCSDDLLEDVLGGKEALAAFKESDEKGYLEVETE 138
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLE-ALAQRIAAVGTDSRPLL 178
L++L+ M LV+ G GAV N ++ G+S+W+DVPLE A+ + ++G +
Sbjct: 139 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSMGAKA---- 194
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
D++++A+ +L ++E E YA ++ VS++N+A +LG+ + SL+ + ++
Sbjct: 195 --TSDPDSFSQAMGKLRQRYDELKERYAVSDVTVSVQNVASQLGYGSIDSLSLEDVVLDI 252
Query: 239 LEQIEGFLKEEDDMAIAG 256
+++IE ++ + M AG
Sbjct: 253 VKKIEKLIRAKSMMEAAG 270
>gi|260426001|ref|ZP_05779980.1| shikimate kinase [Citreicella sp. SE45]
gi|260420493|gb|EEX13744.1| shikimate kinase [Citreicella sp. SE45]
Length = 185
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 19/194 (9%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + LVGMMG+GKT VGK L+ L F D D IE + + T +AEIF GE FFRE+E
Sbjct: 8 KTVVLVGMMGAGKTAVGKALAHALRVPFRDSDAEIELAANMT-IAEIFSRDGEPFFRERE 66
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
++V+ +L R V+STGGGA R N R + ++G++VWLD L L R+ D+RP
Sbjct: 67 SQVIARLLDGRPSVLSTGGGAYMREENRRMITKRGVAVWLDAALPVLWNRVK--HKDTRP 124
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAI 236
LL + D + L ++ +R YA ++ VS E K V ++ I
Sbjct: 125 LLR---TADPHAT----LREIYCKRVPIYALSDLTVSSEQ------GKSVDAMA--QRVI 169
Query: 237 EALEQIEGFLKEED 250
EAL+ L EED
Sbjct: 170 EALKTRPDVLTEED 183
>gi|197117942|ref|YP_002138369.1| shikimate kinase [Geobacter bemidjiensis Bem]
gi|197087302|gb|ACH38573.1| shikimate kinase [Geobacter bemidjiensis Bem]
Length = 170
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 104/190 (54%), Gaps = 27/190 (14%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVD--GTSVAEIFKLYGEGFFREKE 117
I++ G MG GKT+VG++LS LG++F D D +I VD GTS+ EIF GE FR E
Sbjct: 5 IFITGFMGCGKTSVGRVLSQRLGWTFVDLDQVI---VDRAGTSIKEIFASKGEPAFRAVE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
T L +++ + VVSTGGGAV P N M+ G V L +E +A R+ G RP
Sbjct: 62 TAALAEVASRQSQVVSTGGGAVIAPQNREAMRGSGRIVNLTASVETIAARV--TGDSERP 119
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAI 236
LL + DA E R+S++ + R E YA+A+ R+ D + T +A
Sbjct: 120 LL----AADASVE---RISSMLQGREEYYADADLRI------------DTTGKTIEAVAS 160
Query: 237 EALEQIEGFL 246
E ++ ++GFL
Sbjct: 161 EVIDSLKGFL 170
>gi|409402045|ref|ZP_11251671.1| bifunctional shikimate kinase/3-dehydroquinate synthase [Acidocella
sp. MX-AZ02]
gi|409129363|gb|EKM99221.1| bifunctional shikimate kinase/3-dehydroquinate synthase [Acidocella
sp. MX-AZ02]
Length = 537
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 99/188 (52%), Gaps = 26/188 (13%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I LVG+MG+GKT +GK LS +L FFD D IE++ G +++EIFK +GE +FR E
Sbjct: 3 RSIVLVGLMGAGKTAIGKRLSALLKLPFFDADEEIERAA-GMTISEIFKTHGEAYFRAGE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
V+++L ++V++TGGGA TR Y +SVWL P+ L QR + G
Sbjct: 62 KRVIKRLLSQGRIVLATGGGAFMDAETRATIREY---AVSVWLRCPIPVLVQRTS--GRT 116
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
RPLL+ D LS L R YA A+ V G +D +T
Sbjct: 117 HRPLLNAGNPADI-------LSKLSAVRSPVYALADIIVD--------GSEDPPQVTTAK 161
Query: 234 IAIEALEQ 241
+A +ALEQ
Sbjct: 162 VA-QALEQ 168
>gi|395789009|ref|ZP_10468539.1| shikimate kinase [Bartonella taylorii 8TBB]
gi|395431143|gb|EJF97170.1| shikimate kinase [Bartonella taylorii 8TBB]
Length = 210
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 105/198 (53%), Gaps = 23/198 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + LVG+MG+GK+ +GK ++ +L F+D D IE++ + T + E+F+ YGE FR
Sbjct: 22 LDKRALVLVGLMGAGKSVIGKRVATILHLPFYDSDQEIEKAANMT-ITELFETYGEPEFR 80
Query: 115 EKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
E V+ L + LV++TGGGA + + I Q GIS+WL V L+ L +R++ T
Sbjct: 81 ALEQRVILNLIKKKPLVLATGGGAYINQDIRKAIHQNGISIWLKVDLDILMKRVSRRPT- 139
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
RPLL Q E+ + L E+R YA AN ++ HK+ T
Sbjct: 140 -RPLL-QTENPKET------MKKLMEQRYPIYAKANLTIN--------SHKESHH----T 179
Query: 234 IAIEALEQIEGFLKEEDD 251
+A + ++ +L ED+
Sbjct: 180 VAKNVIRSVQHYLSTEDN 197
>gi|392426605|ref|YP_006467599.1| shikimate kinase [Desulfosporosinus acidiphilus SJ4]
gi|391356568|gb|AFM42267.1| shikimate kinase [Desulfosporosinus acidiphilus SJ4]
Length = 175
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 86/153 (56%), Gaps = 13/153 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I L+G MG+GK+TVG+ L+ L ++F D D I V SV+EIF+ YGE FR +E
Sbjct: 2 RNIVLIGFMGTGKSTVGRRLAQALSWNFVDTDAEI-GDVTELSVSEIFRRYGETRFRSEE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
+ V+ +L+ ++V++TGGG V PINW + Q GI V L PLE + QRI + RP
Sbjct: 61 SIVVTRLAQTEEIVIATGGGTVLNPINWEVLAQNGIIVSLYAPLEVILQRIGH--KNDRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LL + TL+ ER Y A+
Sbjct: 119 LLRSSP---------EEIKTLFLERQPFYGKAD 142
>gi|340778412|ref|ZP_08698355.1| shikimate kinase [Acetobacter aceti NBRC 14818]
Length = 588
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 26/189 (13%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L GR I L+G+MG+GK+T+G+ L+ LG F D D IE++ G S+ ++F+LYGE FR
Sbjct: 33 LCGRSILLIGLMGAGKSTIGRRLAQRLGLGFVDADAEIERAA-GCSINDVFRLYGEEAFR 91
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAV 170
+ E VL++L V++TGGGA TR + ++ ISVWL PL L +R++
Sbjct: 92 DGERRVLKRLIDGPSRVIATGGGAFMNEQTRAL---IRERAISVWLRCPLHVLLKRVS-- 146
Query: 171 GTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLT 230
G RPLL +G + L RL + R YA A +I V+ G +V + T
Sbjct: 147 GRTHRPLL----NGPKPRDVLERLMII---RHPVYAEA-------DIIVQCGEDNVDNAT 192
Query: 231 PVTIAIEAL 239
T IEAL
Sbjct: 193 --TRVIEAL 199
>gi|289548323|ref|YP_003473311.1| shikimate kinase [Thermocrinis albus DSM 14484]
gi|289181940|gb|ADC89184.1| Shikimate kinase [Thermocrinis albus DSM 14484]
Length = 166
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 89/151 (58%), Gaps = 13/151 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++LVG M SGK+TVG+ L+ LG+ F D D I++ + T VA IF+ GE +FR E +
Sbjct: 6 VFLVGFMCSGKSTVGRELAHTLGWEFVDVDEEIQRQENNT-VAGIFQEKGEAYFRNLELQ 64
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL +LS +LV+STGGG P+ M+ KG+ VWLD+P + +R G ++RPLL
Sbjct: 65 VLTQLSQRNRLVISTGGGLGANPVAMELMKNKGLVVWLDIPFQEFLERCK--GDENRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANAN 209
+ +L + ++++R E Y A+
Sbjct: 123 KK---------SLEEIQLIYQKRKEVYREAH 144
>gi|385809403|ref|YP_005845799.1| shikimate kinase [Ignavibacterium album JCM 16511]
gi|383801451|gb|AFH48531.1| Shikimate kinase [Ignavibacterium album JCM 16511]
Length = 183
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 97/176 (55%), Gaps = 12/176 (6%)
Query: 59 CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKET 118
I+L G M SGK+T+G IL+ +G+ F D D +IE+ + + EIFK YGE +FR+ E+
Sbjct: 5 LIFLTGFMASGKSTIGPILANTIGWDFLDLDKVIEEKTN-KKIVEIFKEYGEEYFRKLES 63
Query: 119 EVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPL 177
E L++L+ + + V+S GGG + N M+K GI V+L+ E +R+ RP
Sbjct: 64 ETLKELTKLSKYVISLGGGTIENEDNLNQMKKSGILVYLETSPEGAYRRLRF--KRDRPA 121
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN--------IAVKLGHKD 225
L ++ E L R++T+ R + Y A+ +++ +N I VK+ KD
Sbjct: 122 LLFDDNEPTKEEFLKRINTILNRRLKYYNQADLKINTDNKPVGITVDILVKILRKD 177
>gi|374340460|ref|YP_005097196.1| 3-dehydroquinate synthase [Marinitoga piezophila KA3]
gi|372101994|gb|AEX85898.1| 3-dehydroquinate synthetase [Marinitoga piezophila KA3]
Length = 487
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 15/161 (9%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL+GMMGSGKTT+G LS +L SF D D IE+ ++ T++ +F GE +FR E++
Sbjct: 3 IYLIGMMGSGKTTLGNKLSKILNMSFIDLDKEIEK-IENTTINNLFSKKGEEYFRNLESK 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
VL+ + +V+TGGG + R N +++ +++L VP+E L +RI D+RPLL
Sbjct: 62 VLKNTE-AKNAIVATGGGIILRKENRLFLKNHKTIFLYVPVEDLIKRINP---DNRPLLK 117
Query: 180 QCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 220
+ +RL +W+ R Y N ++ L N+ ++
Sbjct: 118 DGK---------DRLYKIWDMRKALY-NEFKKIDLSNLNIQ 148
>gi|296115019|ref|ZP_06833662.1| 3-dehydroquinate synthase [Gluconacetobacter hansenii ATCC 23769]
gi|295978437|gb|EFG85172.1| 3-dehydroquinate synthase [Gluconacetobacter hansenii ATCC 23769]
Length = 587
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 91/174 (52%), Gaps = 12/174 (6%)
Query: 37 PIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSV 96
P+D L + I GR I LVG+MG+GKTT+G++L+ L F D D IE++
Sbjct: 28 PLD-LDALGHGRHAIPTMPQGRSIVLVGLMGAGKTTIGRLLAARLNLEFVDSDEEIERAA 86
Query: 97 DGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVW 155
G S+A++F+ YGE FR E VL++L +V++TGGGA P YM++ SVW
Sbjct: 87 -GCSIADLFQKYGEAEFRRGEHMVLRRLLSGPPVVLATGGGAFMDPRTRAYMRENATSVW 145
Query: 156 LDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
L PL L QR+ RPLL+ LS L +R YA A+
Sbjct: 146 LRCPLPVLLQRVQ--DRTHRPLLN-------VDSPATVLSDLMRKRHPVYAEAD 190
>gi|389876203|ref|YP_006369768.1| 3-dehydroquinate synthase [Tistrella mobilis KA081020-065]
gi|388526987|gb|AFK52184.1| 3-dehydroquinate synthase [Tistrella mobilis KA081020-065]
Length = 184
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 86/153 (56%), Gaps = 10/153 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I LVG+MG GK++VG+ L+ LG F D DT IE++ G V EIF+LYGE FR E
Sbjct: 4 RPIVLVGLMGVGKSSVGRRLAQRLGIDFVDADTEIEKAA-GLPVPEIFRLYGEAEFRRGE 62
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
VL +L R V++TGGGA P + + GISVWL L +A+R+ +RP
Sbjct: 63 RRVLARLLEERPRVIATGGGAFMDPETRAAIARDGISVWLKAELPVIARRVLK-RRHTRP 121
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
L+ + GD A+ L L ER YA A+
Sbjct: 122 LIAE---GD----AMATLERLIRERHPVYAEAD 147
>gi|395788100|ref|ZP_10467676.1| shikimate kinase [Bartonella birtlesii LL-WM9]
gi|395409882|gb|EJF76467.1| shikimate kinase [Bartonella birtlesii LL-WM9]
Length = 210
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 106/198 (53%), Gaps = 23/198 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L+ R + VG+MG+GK+ +GK ++ +L F+D D IE++ T + E+FK YGE FR
Sbjct: 22 LNNRALVFVGLMGAGKSVIGKRVATMLHLPFYDSDHEIEKASKMT-ITELFKTYGESEFR 80
Query: 115 EKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
E V+ L L+++TGGGA + + I Q IS+WL V L L QR++ T
Sbjct: 81 ALEQRVIFNLIKKSPLILATGGGAYINQDIRKTIQQNAISIWLKVDLNILMQRVSKRKT- 139
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
RPLL Q E+ TE + + L E+R YA AN V+ HK+ + +T
Sbjct: 140 -RPLL-QTENP---TETMQK---LMEQRYPIYAKANVTVN--------SHKE----SRLT 179
Query: 234 IAIEALEQIEGFLKEEDD 251
IA + ++ +L E++
Sbjct: 180 IAKAVIRSVQHYLDTENN 197
>gi|395778862|ref|ZP_10459373.1| shikimate kinase [Bartonella elizabethae Re6043vi]
gi|423714710|ref|ZP_17688934.1| shikimate kinase [Bartonella elizabethae F9251]
gi|395417037|gb|EJF83389.1| shikimate kinase [Bartonella elizabethae Re6043vi]
gi|395430929|gb|EJF96957.1| shikimate kinase [Bartonella elizabethae F9251]
Length = 196
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 29/213 (13%)
Query: 35 HAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQ 94
H P+ + + ++I L + + VG+MG+GK+ +G+ ++ +L F+D D IE+
Sbjct: 8 HPPLSQIK------RQILSSLDNQALVFVGLMGAGKSVIGRRVATILDLPFYDSDQEIEK 61
Query: 95 SVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGIS 153
+ S+ EIFK+YGE FR E V+ L R LV++TGGGA + + I Q GIS
Sbjct: 62 AAQ-MSITEIFKIYGEAEFRSLEQRVILNLIKKRPLVLATGGGAYINQEIRKAIQQNGIS 120
Query: 154 VWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
+WL L+ L QR++ T RPLL + + L E+R YA AN ++
Sbjct: 121 LWLKADLDILMQRVSKRPT--RPLLQTENPKET-------MQKLMEQRYPLYAKANVTIN 171
Query: 214 LENIAVKLGHKDVSSLTPVTIAIEALEQIEGFL 246
HK+ +P +A + ++ +L
Sbjct: 172 --------SHKE----SPYGVAKNVIRSLQHYL 192
>gi|149202770|ref|ZP_01879742.1| shikimate kinase [Roseovarius sp. TM1035]
gi|149144052|gb|EDM32086.1| shikimate kinase [Roseovarius sp. TM1035]
Length = 193
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 92/163 (56%), Gaps = 5/163 (3%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
G+ + LVGMMG+GKT VGK L+ +G F D D IE++ + +++EIF+ GE FFR +
Sbjct: 17 GKTVVLVGMMGAGKTAVGKALAARIGVPFLDSDAEIEKAAN-MAISEIFQRDGETFFRAR 75
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSR 175
ETEV+ +L + ++STGGGA N + +KG+SVWLD L L R+ G ++R
Sbjct: 76 ETEVIDRLLDGPRAILSTGGGAFLAERNRDLVARKGVSVWLDADLPLLWSRVK--GKNTR 133
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
PLL + + N ++ E E A S+E +A
Sbjct: 134 PLLRTAHPYETLADIYNARVPIY-ELAEIRVRARPEYSVEAMA 175
>gi|260433973|ref|ZP_05787944.1| shikimate kinase [Silicibacter lacuscaerulensis ITI-1157]
gi|260417801|gb|EEX11060.1| shikimate kinase [Silicibacter lacuscaerulensis ITI-1157]
Length = 195
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 89/153 (58%), Gaps = 11/153 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + +VGMMG+GKT VG+ L+ LG F D D IE + + T + EIF+ GE FFR KE
Sbjct: 21 KTVVMVGMMGAGKTAVGRALAARLGVPFLDSDAEIESAANMT-IPEIFERDGEAFFRAKE 79
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
++V+ +L ++ ++STGGGA N R + ++G+SVWL LE L R+ D+RP
Sbjct: 80 SQVIGRLLDEQKGILSTGGGAFLSEANRRMISERGVSVWLRADLEVLWNRVRH--KDTRP 137
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LL + D Y LS L++ R Y A+
Sbjct: 138 LLR---TPDPYAT----LSALYQARVPLYQQAD 163
>gi|217969270|ref|YP_002354504.1| shikimate kinase [Thauera sp. MZ1T]
gi|217506597|gb|ACK53608.1| Shikimate kinase [Thauera sp. MZ1T]
Length = 176
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 5/136 (3%)
Query: 59 CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKET 118
C+ L+GMMG+GKTTVGK L+ F DCD I G S+ IF+L GE FR +ET
Sbjct: 3 CLILIGMMGAGKTTVGKELARRRRMRFADCDQAIVART-GVSIPTIFELEGEAGFRRRET 61
Query: 119 EVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPL 177
+++ +L+ LV++TGGG V P+N M ++GI ++LDVP + L +R +RPL
Sbjct: 62 QMIDELTREPDLVLATGGGVVVTPLNRELMRERGIVIYLDVPTQVLFERTRH--DRNRPL 119
Query: 178 LHQCESGDAYTEALNR 193
L Q E+ E L+R
Sbjct: 120 L-QVENPRQRIEELHR 134
>gi|339503832|ref|YP_004691252.1| shikimate kinase [Roseobacter litoralis Och 149]
gi|338757825|gb|AEI94289.1| putative shikimate kinase [Roseobacter litoralis Och 149]
Length = 197
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 89/160 (55%), Gaps = 11/160 (6%)
Query: 54 YLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFF 113
++ + I ++GMMG+GKT VG+ L+ +L F D D IE++ + SV EIF GE FF
Sbjct: 17 FVLKKTIVMIGMMGAGKTAVGRALAQLLDVPFLDSDHEIEEAAN-MSVPEIFARDGEAFF 75
Query: 114 REKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGT 172
R +E+EV+ +L + V+STGGGA N + +G+SVWLD +E L R+
Sbjct: 76 RARESEVINRLLSGQACVLSTGGGAFLAEANRAAISARGVSVWLDADIELLWNRVK--HR 133
Query: 173 DSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
D+RPLL + LS L+E R YA A+ V
Sbjct: 134 DTRPLLRTPDPKAT-------LSALYETRVPEYAKADMTV 166
>gi|116619905|ref|YP_822061.1| shikimate kinase [Candidatus Solibacter usitatus Ellin6076]
gi|116223067|gb|ABJ81776.1| shikimate kinase [Candidatus Solibacter usitatus Ellin6076]
Length = 176
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 97/177 (54%), Gaps = 24/177 (13%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IY+VG MG+GK+TVG+ L+ LG+SFFD D IE++ + S+A IF+ GE FR ETE
Sbjct: 11 IYVVGFMGAGKSTVGRHLAHHLGWSFFDSDEEIERA-EKASIASIFEERGEAEFRRIETE 69
Query: 120 VLQK----LSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDS 174
++++ + R V++ GGGA +P N + ++ GI+VWLD P E + QR+A
Sbjct: 70 IIRQHVGWIERGRPAVLALGGGAYAQPANRQLLENNGITVWLDCPFELVQQRVAQ--ATH 127
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN------IAVKLGHKD 225
RPL E+ + L+ R Y A +V +E+ + LGH +
Sbjct: 128 RPLARDPEA----------FAALYHARRADYGRAAVQVVIESDDPDVTVGAILGHPE 174
>gi|340028601|ref|ZP_08664664.1| shikimate kinase [Paracoccus sp. TRP]
Length = 178
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I L+GMMG+GKT +G L+ L F D D IE++ S+ EIF GE FFR +E
Sbjct: 3 RNIVLIGMMGAGKTAIGGELARRLNRPFHDTDAEIERAA-AMSIPEIFARDGEEFFRARE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAAVGTDSRP 176
+EVL+++ +VSTGGGA RP N R Q G++VWLD LE L R+ T RP
Sbjct: 62 SEVLRRVLSSGPGIVSTGGGAWLRPENRGRIAQDGVAVWLDCDLETLWHRVRHRPT--RP 119
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
LL + L RL T ER YA A+ RV +
Sbjct: 120 LLQTADP----RGTLERLLT---ERSPVYALADIRVPAQR 152
>gi|284037203|ref|YP_003387133.1| shikimate kinase [Spirosoma linguale DSM 74]
gi|283816496|gb|ADB38334.1| Shikimate kinase [Spirosoma linguale DSM 74]
Length = 168
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 74/121 (61%), Gaps = 2/121 (1%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I+L+GM SGK+T+GK ++ L Y F D D LI + +G ++AEIF GE +FRE E
Sbjct: 2 KNIFLIGMPSSGKSTLGKRVADTLHYRFIDTDKLISRE-EGRTIAEIFAESGEAYFREAE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
VL+ + +VVSTGGG N Y+ G+SV+LDVP+ L QRI A + RP
Sbjct: 61 RRVLRTIRPGGNMVVSTGGGMPCFHDNMAYINATGVSVFLDVPVNVLVQRITAHAQEDRP 120
Query: 177 L 177
L
Sbjct: 121 L 121
>gi|54288385|gb|AAV31673.1| predicted shikimate kinase [uncultured alpha proteobacterium
EBAC2C11]
Length = 198
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R + LVG+MGSGK+ VG+ + LG F D D I + G S+ EIF+L GE FRE E
Sbjct: 28 RPLALVGLMGSGKSAVGRQTAKKLGLDFTDSDQKIINNA-GISITEIFELAGEAKFREME 86
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWR-YMQKGISVWLDVPLEALAQRIAAVGTDSRP 176
+ L+KL+L + +++TGGGA P + K + VWL P E L RI GT SRP
Sbjct: 87 FQALKKLALSKPQIIATGGGAFCFPQTAHLLLTKTLVVWLKAPPETLLARIG--GTKSRP 144
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 220
LL+ L L+ L +ER + Y A ++ + ++ +
Sbjct: 145 LLNN-------DNPLATLTKLSKERAKHYQKAQIEINTDGLSTR 181
>gi|147798826|emb|CAN61068.1| hypothetical protein VITISV_006589 [Vitis vinifera]
Length = 460
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 70/261 (26%)
Query: 38 IDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVD 97
+D + +K K+ EI P L G I+LVGM + KT VGK+L+ L Y FD D+L+E++
Sbjct: 81 VDLSLAVKKKAMEISPVLKGTSIFLVGMNSTIKTNVGKLLADALRYYHFDSDSLVEEACG 140
Query: 98 GTSVAEIFKLYGEGFFREKE---------------------------TEVLQKLSLMRQL 130
G S A+ K E F + E TEVL++LS M +L
Sbjct: 141 GESAAKSLKEQDEKGFHDSEVILLDFYPVACVSAYLCTGLGTGIVKLTEVLKQLSSMGRL 200
Query: 131 VVSTGGGAVTRPINW---RY---------------------------------MQKGISV 154
VV G G V N R+ ++ GIS+
Sbjct: 201 VVCAGDGLVQSSTNLYGNRFLVFLFLMLRQVICYGQNQFSYPQPSSLNNDRALLRHGISI 260
Query: 155 WLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEA-----LNRLSTLWEERGEAYANAN 209
W+DVP+E +A+ + G + + + ++Y+E +L+ ++EE YA A+
Sbjct: 261 WIDVPIEMVAKNMIEEGVQIP--VTELSTAESYSETGDNQVFAQLAVVYEEMKGGYATAD 318
Query: 210 ARVSLENIAVKLGHKDVSSLT 230
A VSL+ +A +LG+ D+ ++T
Sbjct: 319 ASVSLQKVASQLGYDDLDAVT 339
>gi|393771564|ref|ZP_10360035.1| shikimate kinase [Novosphingobium sp. Rr 2-17]
gi|392723051|gb|EIZ80445.1| shikimate kinase [Novosphingobium sp. Rr 2-17]
Length = 193
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 93/163 (57%), Gaps = 21/163 (12%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I LVGMMG GK+TVG+ ++ +LGY F D D IE+S S+ EIF +GE +FR+ E
Sbjct: 22 KPIVLVGMMGVGKSTVGRRMAALLGYDFADADDEIERSAQ-MSIPEIFDTFGESYFRDGE 80
Query: 118 TEVLQKL----SLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAA 169
V+ +L + R +V++TGGGA TR + + K I+VWLD ++ L +R A
Sbjct: 81 RRVISRLLADHTDGRHIVIATGGGAFCNDETRAL---ILDKAITVWLDSEVDTLVERTAR 137
Query: 170 VGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
D+RPLL GD E L RL ER YA+A RV
Sbjct: 138 --KDNRPLL---RGGDP-REILARLRA---EREPHYAHAPIRV 171
>gi|114800012|ref|YP_758815.1| shikimate kinase [Hyphomonas neptunium ATCC 15444]
gi|114740186|gb|ABI78311.1| shikimate kinase [Hyphomonas neptunium ATCC 15444]
Length = 186
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 88/141 (62%), Gaps = 5/141 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
GR I LVG+MG+GK+TVG+ L+ LG F+D D IE++ G S+++IF +GE FR
Sbjct: 14 FEGRTIALVGLMGAGKSTVGRRLAEKLGRDFYDSDHEIEKAA-GLSISDIFAKHGEADFR 72
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD 173
E +V+++L ++ V++TGGGA P + ++ I+VWL+ LE L +R+ D
Sbjct: 73 RGEKQVIRRLLDLQPHVLATGGGAYLDPDTRAILRERAITVWLNADLETLWRRVQK--RD 130
Query: 174 SRPLLHQCESGDAYTE-ALNR 193
+RPLL + ++ D AL+R
Sbjct: 131 TRPLLQRADARDHLANLALDR 151
>gi|395781449|ref|ZP_10461867.1| shikimate kinase [Bartonella rattimassiliensis 15908]
gi|395420882|gb|EJF87140.1| shikimate kinase [Bartonella rattimassiliensis 15908]
Length = 196
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 15/183 (8%)
Query: 32 GNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTL 91
N P+ +Q+ ++I + + + VG+MG+GK+ +GK ++ +LG F+D D
Sbjct: 3 NNRPHPLPLSQI----KRQILSSIDNQALVFVGLMGAGKSVIGKRIANMLGLPFYDSDQE 58
Query: 92 IEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQK 150
IE++ S+ EIF++YGE FR E ++ L R LV++TGGGA + + Q
Sbjct: 59 IEKAAQ-MSIKEIFQIYGEAEFRILEQRIILNLIKKRPLVLATGGGAYMNQDTRQAIHQN 117
Query: 151 GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANA 210
GIS+WL V L+ L QR++ T RPLL + + L E+R YA AN
Sbjct: 118 GISIWLKVDLDILMQRVSKRPT--RPLLQTANPKET-------MQKLMEQRYPIYAKANL 168
Query: 211 RVS 213
++
Sbjct: 169 TIN 171
>gi|346224140|ref|ZP_08845282.1| shikimate kinase [Anaerophaga thermohalophila DSM 12881]
Length = 173
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 98/185 (52%), Gaps = 22/185 (11%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL G MGSGKTT G++L+ L F D D LIE+ +G SV+E+F YGE FR E
Sbjct: 5 IYLTGFMGSGKTTFGRMLADALNRDFLDLDHLIEKQ-EGASVSELFSKYGEDGFRSIEHN 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L +++TGGGA N +M + G++++L V EALA+R+ D RPL+
Sbjct: 64 ILLSTKDRTNAIIATGGGAPCFQDNMDFMNRHGLTIYLKVSPEALAKRLLP-SRDHRPLI 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTP---VTIA 235
+G + TE LN + T ER Y A IA D S L+P + I
Sbjct: 123 ----AGKSETELLNFIRTKLSERDPWYNKAQI------IA------DTSGLSPQDTLRIV 166
Query: 236 IEALE 240
++ALE
Sbjct: 167 MKALE 171
>gi|326802595|ref|YP_004320414.1| shikimate kinase [Sphingobacterium sp. 21]
gi|326553359|gb|ADZ81744.1| Shikimate kinase [Sphingobacterium sp. 21]
Length = 170
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 94/164 (57%), Gaps = 8/164 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCD-TLIEQSVDGTSVAEIFKLYGEGFFREK 116
+ I+LVG MG GKTT GK L+ L F D D T +EQ+ G S+ + FK +GE FR K
Sbjct: 4 KHIFLVGFMGVGKTTNGKKLAQALNRKFIDLDETFVEQA--GMSITDYFKKHGEKAFRVK 61
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSR 175
E ++LQ LS V++TGGGA N +M K GI+++L +P ALA+R+A+ R
Sbjct: 62 ERDILQNLSAPEAAVIATGGGAPCFFDNMEWMNKNGITIYLQIPTAALAKRLASSKRHKR 121
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 219
PL+ Q S + E +N + R YA A+ +++ ++ +
Sbjct: 122 PLI-QDLSEEQIFEFINERMLV---RHPYYAQAHHHINVIDLNI 161
>gi|220921140|ref|YP_002496441.1| shikimate kinase [Methylobacterium nodulans ORS 2060]
gi|219945746|gb|ACL56138.1| shikimate kinase [Methylobacterium nodulans ORS 2060]
Length = 200
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I LVG+MG+GK+TVG+ L+G LG F D D IE + G ++A+IF +YGE FR
Sbjct: 19 LGQRSIVLVGLMGAGKSTVGRRLAGRLGMIFMDADHEIEAAA-GLTIADIFAIYGETSFR 77
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
+ E V+ +L +V++TGGGA RP R ++G+SVWL L+ L +R+
Sbjct: 78 DGEERVIARLLRDGPMVLATGGGAFMRPETRRRIAERGVSVWLKAELDVLMRRVRK--RP 135
Query: 174 SRPLLHQ 180
RPLL
Sbjct: 136 GRPLLQN 142
>gi|395792702|ref|ZP_10472126.1| shikimate kinase [Bartonella vinsonii subsp. arupensis Pm136co]
gi|395432259|gb|EJF98248.1| shikimate kinase [Bartonella vinsonii subsp. arupensis Pm136co]
Length = 210
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 95/168 (56%), Gaps = 15/168 (8%)
Query: 49 QEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLY 108
+E+ L R + LVG+MG+GK+ +G+ ++ +L F+D D IE++ T + E+FK+Y
Sbjct: 16 KELLSVLDKRALVLVGLMGAGKSVIGQRIATMLHLPFYDSDQEIEKAAQMT-ITELFKIY 74
Query: 109 GEGFFREKETEVLQKLSLMRQ--LVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQ 165
GE FR E V+ L+LM++ L+++TGGGA + I Q GIS+WL V L+ L +
Sbjct: 75 GEAEFRALEQRVI--LNLMKKSPLILATGGGAYMNENIRKAIHQNGISIWLKVDLDILMK 132
Query: 166 RIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
R+ + +RPLL + + L E+R YA AN ++
Sbjct: 133 RV--LRRPTRPLLQTANPKET-------MQKLMEQRNPVYAKANLTIN 171
>gi|15607112|ref|NP_214494.1| shikimate kinase [Aquifex aeolicus VF5]
gi|7673950|sp|O67925.1|AROK_AQUAE RecName: Full=Shikimate kinase; Short=SK
gi|2984356|gb|AAC07875.1| shikimate kinase [Aquifex aeolicus VF5]
Length = 168
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 89/158 (56%), Gaps = 13/158 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL+G M SGK+TVG +LS L F+D D + Q +G S+ +IF+ GE +FR+ E E
Sbjct: 3 IYLIGFMCSGKSTVGSLLSRSLNIPFYDVDEEV-QKREGLSIPQIFEKKGEAYFRKLEFE 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL+ LS +V+STGGG +M+ +G +V++D+P E +R + RPLL
Sbjct: 62 VLKDLSEKENVVISTGGGLGANEEALNFMKSRGTTVFIDIPFEVFLERCK--DSKERPLL 119
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
+ L+ + L+EER + Y+ A+ +V E
Sbjct: 120 KR---------PLDEIKNLFEERRKIYSKADIKVKGEK 148
>gi|189424650|ref|YP_001951827.1| shikimate kinase [Geobacter lovleyi SZ]
gi|189420909|gb|ACD95307.1| Shikimate kinase [Geobacter lovleyi SZ]
Length = 175
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 96/170 (56%), Gaps = 17/170 (10%)
Query: 59 CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTL-IEQSVDGTSVAEIFKLYGEGFFREKE 117
I L G MGSGKT+VG++L+ LGY F D D L +EQ+ G S+ +IF GE FRE+E
Sbjct: 4 SIILTGPMGSGKTSVGQLLAARLGYRFQDLDALLVEQA--GKSINQIFADEGEAAFRERE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
T +L L +++STGGG V R N R + G+ V L + LA R+A D RP
Sbjct: 62 TALLATLVGQHGIILSTGGGVVIREANRRLLHAGGLVVNLTATVPVLAGRLAL--ADDRP 119
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 221
LL GD EA R+ + ER YA+A+ R+ +LE++A ++
Sbjct: 120 LL----KGDEALEA--RIERIMTEREPFYADADIRIDTTGKTLEDVAAEI 163
>gi|310780186|ref|YP_003968518.1| shikimate kinase [Ilyobacter polytropus DSM 2926]
gi|309749509|gb|ADO84170.1| Shikimate kinase [Ilyobacter polytropus DSM 2926]
Length = 171
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 87/149 (58%), Gaps = 11/149 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L+G MGSGK+TVG ILS LGYSF D D ++E+ + S++ +F+ +GE +FRE+E +
Sbjct: 5 IFLIGFMGSGKSTVGHILSEKLGYSFVDTDNIVEKDWE-MSISSMFEEHGENYFREREYK 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
L+K+ + VVSTGGG VT + ++ ++DV E + +R+ + T RPLL
Sbjct: 64 ALKKIIENKNQVVSTGGGIVTFEKSRELLEGQEVYYIDVDSETVYKRLKSDNT--RPLLK 121
Query: 180 QCESGDAYTEALNRLSTLWEERGEAYANA 208
C + ++S L R + Y N
Sbjct: 122 NC--------SFEKMSDLLSFRKKIYENT 142
>gi|407780153|ref|ZP_11127399.1| shikimate kinase [Nitratireductor pacificus pht-3B]
gi|407298030|gb|EKF17176.1| shikimate kinase [Nitratireductor pacificus pht-3B]
Length = 207
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 101/196 (51%), Gaps = 23/196 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + VG+MG+GKT +G+ ++ +LG F D D IE +V +VA++F YGE FR
Sbjct: 19 LGARSVVFVGLMGAGKTVIGRRVAEMLGMPFVDSDHEIE-AVSRMTVADLFSAYGEAEFR 77
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD 173
E V+ +L VVSTGGGA P R + ++GISVWL L L +R+ T
Sbjct: 78 ALERRVIARLLKTGPRVVSTGGGAFVNPATRRAVGRRGISVWLKADLPTLVERVGRKTT- 136
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
RPLL + E LNR L EER YA A+ + N KD+
Sbjct: 137 -RPLLVDNDP----AEVLNR---LMEERYPLYAEADTVIHSRN-----EPKDL------- 176
Query: 234 IAIEALEQIEGFLKEE 249
IA E + ++ +L+EE
Sbjct: 177 IAGEVIAALDAYLEEE 192
>gi|254467208|ref|ZP_05080619.1| shikimate kinase [Rhodobacterales bacterium Y4I]
gi|206688116|gb|EDZ48598.1| shikimate kinase [Rhodobacterales bacterium Y4I]
Length = 196
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I +VGMMG+GKT VG+ L+ L F D D IE + + T + EIF GE FFR+KE
Sbjct: 22 KTIVMVGMMGAGKTAVGRALAARLNVPFLDSDHEIEAAANMT-IPEIFARDGEPFFRQKE 80
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
+V+ +L + V+STGGGA N + KG+SVWLD L+ L R+ D+RP
Sbjct: 81 RQVIARLLAEERGVLSTGGGAFLAQENREVITAKGVSVWLDAGLDVLWNRVRH--RDTRP 138
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
LL + D Y L L+E+R YA A+ V+
Sbjct: 139 LLR---TADPYAT----LRNLYEQRVPLYAKADLTVA 168
>gi|302389883|ref|YP_003825704.1| 3-dehydroquinate dehydratase [Thermosediminibacter oceani DSM
16646]
gi|302200511|gb|ADL08081.1| 3-dehydroquinate dehydratase, type II [Thermosediminibacter oceani
DSM 16646]
Length = 346
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 83/141 (58%), Gaps = 7/141 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MGSGKT++GK+L+ LG F D D LI Q G ++EIF +GE +FR KE E
Sbjct: 7 IVLIGFMGSGKTSIGKMLAEKLGKRFLDTDELIRQEC-GMEISEIFHKFGEEYFRNKEKE 65
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+++ + V++TGGG V P N +++ GI VWL E + QRI+ G SRPL
Sbjct: 66 TVERAAAREGTVIATGGGVVLNPENMEKLRRSGIIVWLRASEEEILQRIS--GDASRPLA 123
Query: 179 ---HQCESGDAYTEALNRLST 196
+ E + Y++ LN +T
Sbjct: 124 SNKSESEILEIYSKRLNLYAT 144
>gi|402571545|ref|YP_006620888.1| shikimate kinase [Desulfosporosinus meridiei DSM 13257]
gi|402252742|gb|AFQ43017.1| shikimate kinase [Desulfosporosinus meridiei DSM 13257]
Length = 177
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 13/153 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I L+G MG+GK+TVGK L+ L ++F D D I + V SV+EIF+ +GE FR +E
Sbjct: 2 RNIVLIGFMGTGKSTVGKRLAQSLSWNFVDTDCEIGE-VTSLSVSEIFRRHGETRFRSEE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+ V+ +LS QLV++TGGG V P+N + K GI + L LEA+ RI + RP
Sbjct: 61 SIVVTRLSQQEQLVIATGGGTVLNPLNLSALAKNGIVIALHASLEAILSRIGH--KNDRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LL EA+ + LW ER Y A+
Sbjct: 119 LLK------GPREAIEK---LWSERQNVYVQAD 142
>gi|376261192|ref|YP_005147912.1| shikimate kinase [Clostridium sp. BNL1100]
gi|373945186|gb|AEY66107.1| shikimate kinase [Clostridium sp. BNL1100]
Length = 195
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 81/128 (63%), Gaps = 5/128 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ + I L+G MG GKTTVG +LS L Y+F+DCD +I+Q ++ ++F+LYGE +FR
Sbjct: 1 MRDKNIVLIGFMGVGKTTVGNVLSNALNYNFYDCDNIIKQQF-SMNIKDLFELYGEAYFR 59
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIA---AV 170
+ E +V+++LS + V++TGGG V P N ++K GI ++L+ + + I+
Sbjct: 60 DVEAKVIKELSNSSKSVIATGGGIVLNPSNIYNLKKNGIIIFLEALPATILRNISKDNVK 119
Query: 171 GTDSRPLL 178
T+ RPLL
Sbjct: 120 STEDRPLL 127
>gi|374579552|ref|ZP_09652646.1| shikimate kinase [Desulfosporosinus youngiae DSM 17734]
gi|374415634|gb|EHQ88069.1| shikimate kinase [Desulfosporosinus youngiae DSM 17734]
Length = 177
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 85/153 (55%), Gaps = 13/153 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I L+G MG+GK+TVGK L+ L + F D D I + V SV+EIF+ +GE FR +E
Sbjct: 2 RNIVLIGFMGTGKSTVGKRLAQSLAWDFVDTDYEIGE-VTSMSVSEIFRRHGETRFRSEE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
+ V+ +LS +LV++TGGG V P NW + Q GI + L LEA+ RI + RP
Sbjct: 61 SIVVTRLSQQERLVIATGGGTVLNPANWNALAQNGIVIALHASLEAILARIGH--KNDRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LL + + LW +R YA A+
Sbjct: 119 LLKGPR---------DVIEKLWSDRQACYAQAD 142
>gi|423713364|ref|ZP_17687624.1| shikimate kinase [Bartonella vinsonii subsp. arupensis OK-94-513]
gi|395423405|gb|EJF89600.1| shikimate kinase [Bartonella vinsonii subsp. arupensis OK-94-513]
Length = 210
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 95/168 (56%), Gaps = 15/168 (8%)
Query: 49 QEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLY 108
+E+ L R + LVG+MG+GK+ +G+ ++ +L F+D D IE++ T + E+FK+Y
Sbjct: 16 KELLSVLDKRALVLVGLMGAGKSVIGQRIATMLHLPFYDSDQEIEKAAQMT-ITELFKIY 74
Query: 109 GEGFFREKETEVLQKLSLMRQ--LVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQ 165
GE FR E V+ L+LM++ L+++TGGGA + I Q GIS+WL V L+ L +
Sbjct: 75 GEAEFRALEQRVI--LNLMKKSPLILATGGGAYMNENIRKAIHQNGISIWLKVDLDILMK 132
Query: 166 RIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
R+ + +RPLL + + L E+R YA AN ++
Sbjct: 133 RV--LRRPTRPLLQTANPKET-------MQKLMEQRNPVYAKANLTIN 171
>gi|226500818|ref|NP_001150361.1| shikimate kinase family protein [Zea mays]
gi|195638646|gb|ACG38791.1| shikimate kinase family protein [Zea mays]
gi|414868512|tpg|DAA47069.1| TPA: shikimate kinase family protein [Zea mays]
Length = 273
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 106/198 (53%), Gaps = 7/198 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IY+VG + K + K+L+ + Y + + L+E + G FK E + E ETE
Sbjct: 79 IYIVGTDCTAKRNIAKLLANSIIYRYLSSEELLEDVLGGKDALRAFKESDEKGYLEVETE 138
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQ-RIAAVGTDSRPLL 178
L++L+ M LV+ G GAV N ++ G+S+W+DVPLE A + + GT +
Sbjct: 139 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLEMAANDMLKSTGTQA---- 194
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
D++++A+++L ++E E Y ++ VS++N+A + G+ + +T + +E
Sbjct: 195 --TTDPDSFSQAMSKLRQRYDELKERYGVSDITVSVQNVASQRGYSSIDLVTLEDMVLEI 252
Query: 239 LEQIEGFLKEEDDMAIAG 256
+ QIE ++ ++ M AG
Sbjct: 253 VRQIEKLIRAKEMMEAAG 270
>gi|395780531|ref|ZP_10460993.1| shikimate kinase [Bartonella washoensis 085-0475]
gi|423711872|ref|ZP_17686177.1| shikimate kinase [Bartonella washoensis Sb944nv]
gi|395412720|gb|EJF79200.1| shikimate kinase [Bartonella washoensis Sb944nv]
gi|395418877|gb|EJF85194.1| shikimate kinase [Bartonella washoensis 085-0475]
Length = 210
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 88/160 (55%), Gaps = 11/160 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + L+G+MG+GK+ +GK ++ +L F+D D IE++ + E+FK+YGE FR
Sbjct: 22 LDKRALVLIGLMGAGKSVIGKRVATMLHLPFYDSDQEIEKAAQ-MKITELFKVYGEPEFR 80
Query: 115 EKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
E V+ L + LV++TGGGA + I + GIS+WL V L+ L +R++ T
Sbjct: 81 ALERRVILNLLKKKPLVLATGGGAYINEDIRQAIHKNGISIWLKVDLDILMKRVSKHPT- 139
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
RPLL + + L E+R YANAN ++
Sbjct: 140 -RPLLQTANPKET-------MQKLMEQRYPIYANANLTIN 171
>gi|163816773|ref|ZP_02208136.1| hypothetical protein COPEUT_02963 [Coprococcus eutactus ATCC 27759]
gi|158448030|gb|EDP25025.1| shikimate dehydrogenase [Coprococcus eutactus ATCC 27759]
Length = 458
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 88/150 (58%), Gaps = 12/150 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I L+G MG GKTTVG ++G LGY+ D D IE+ G S+++IF GE +FRE E
Sbjct: 292 KNIILIGFMGCGKTTVGTAVAGRLGYNLLDVDLYIEKEA-GCSISQIFADKGEQYFRELE 350
Query: 118 TEVLQKLSL-MRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSR 175
T+ L+KL+ + V+STGGG RP N ++K G ++LDV E + +R++ G SR
Sbjct: 351 TDTLKKLNASISHTVISTGGGLPMRPENAEELRKLGTVIYLDVQPEEVIRRLS--GDTSR 408
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAY 205
PLL GD +NR L +ER Y
Sbjct: 409 PLLQ----GDDVERKVNR---LMDERRPVY 431
>gi|115433984|ref|NP_001041750.1| Os01g0102600 [Oryza sativa Japonica Group]
gi|113531281|dbj|BAF03664.1| Os01g0102600 [Oryza sativa Japonica Group]
gi|215694019|dbj|BAG89218.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187341|gb|EEC69768.1| hypothetical protein OsI_00024 [Oryza sativa Indica Group]
gi|222617567|gb|EEE53699.1| hypothetical protein OsJ_00021 [Oryza sativa Japonica Group]
Length = 269
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 103/197 (52%), Gaps = 8/197 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IY+VG + K + K+L+ + Y + + L+E + G F+ + E ETE
Sbjct: 78 IYIVGTDCTAKRNIAKLLANSIIYRYLCSEELLEDVLGGKDALNAFRESDLNGYLEVETE 137
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
L++L+ M LV+ G GAV N ++ G+S+W+D+PLE + + S P
Sbjct: 138 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDIPLELVVNDMLKTQATSDP--- 194
Query: 180 QCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEAL 239
D+++EA++R+ +E E Y ++ VS++N+A +LG+ + S+T + +E +
Sbjct: 195 -----DSFSEAMSRVRQRHDELKERYGVSDITVSVQNVASQLGYSSIDSVTLEDMVLEIV 249
Query: 240 EQIEGFLKEEDDMAIAG 256
QIE ++ + M AG
Sbjct: 250 RQIERLIRAKSMMEAAG 266
>gi|434387800|ref|YP_007098411.1| shikimate kinase [Chamaesiphon minutus PCC 6605]
gi|428018790|gb|AFY94884.1| shikimate kinase [Chamaesiphon minutus PCC 6605]
Length = 202
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 26/178 (14%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDT------------------LIEQSV 96
L G IYL+GMMG GK+TV +L+ LGY+F D D L E +
Sbjct: 4 LQGLNIYLIGMMGCGKSTVAPLLADRLGYNFLDTDITLAKSCAKPLGYDFEDTDLSESEL 63
Query: 97 DGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWL 156
+ E+F+ GE FR ET+VL ++S +LVV+TGGG NW ++ +G+ +WL
Sbjct: 64 IAKIIRELFQTVGEPEFRAIETQVLAEVSAYTRLVVATGGGIAIERENWNHLHQGLVIWL 123
Query: 157 DVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
D ++ L +R+ G +RP+L E + ++L L ER YA A+ + +
Sbjct: 124 DPAVDLLVERLQ--GDTTRPILANSE------DLQSKLDQLLSERRYRYAEADIHLPV 173
>gi|254560762|ref|YP_003067857.1| bifunctional shikimate kinase/dehydroquinate synthase
[Methylobacterium extorquens DM4]
gi|254268040|emb|CAX23911.1| bifunctional shikimate kinase (N-terminal) / dehydroquinate
synthase (C-terminal) enzyme [Methylobacterium
extorquens DM4]
Length = 579
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 89/159 (55%), Gaps = 11/159 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I LVG+MG+GK+TVG+ L+G LG F D D IE + ++A+IF +YGE FR
Sbjct: 23 LGARSIVLVGLMGAGKSTVGRRLAGRLGLMFKDADHEIEAAAK-LTIADIFSIYGEASFR 81
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
E E V+ +L +V++TGGGA R R + ISVWL L+ L +R+ +
Sbjct: 82 EGEERVIARLLREGPMVLATGGGAFMREATRARIAEGAISVWLKADLDVLMRRVRK--RN 139
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
+RPLL Q E +A + TL E R YA A+ V
Sbjct: 140 TRPLL-QTEDPEAT------MRTLMEVRHPVYAQADVTV 171
>gi|218529898|ref|YP_002420714.1| shikimate kinase., 3-dehydroquinate synthase [Methylobacterium
extorquens CM4]
gi|218522201|gb|ACK82786.1| Shikimate kinase., 3-dehydroquinate synthase [Methylobacterium
extorquens CM4]
Length = 579
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 89/159 (55%), Gaps = 11/159 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I LVG+MG+GK+TVG+ L+G LG F D D IE + ++A+IF +YGE FR
Sbjct: 23 LGARSIVLVGLMGAGKSTVGRRLAGRLGLMFKDADHEIEAAAK-LTIADIFSIYGEASFR 81
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
E E V+ +L +V++TGGGA R R + ISVWL L+ L +R+ +
Sbjct: 82 EGEERVIARLLREGPMVLATGGGAFMREATRARIAEGAISVWLKADLDVLMRRVRK--RN 139
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
+RPLL Q E +A + TL E R YA A+ V
Sbjct: 140 TRPLL-QTEDPEAT------MRTLMEVRHPVYAQADVTV 171
>gi|240138202|ref|YP_002962674.1| bifunctional shikimate kinase (N-terminal) / dehydroquinate
synthase (C-terminal) enzyme [Methylobacterium
extorquens AM1]
gi|418059753|ref|ZP_12697692.1| 3-dehydroquinate synthase [Methylobacterium extorquens DSM 13060]
gi|240008171|gb|ACS39397.1| bifunctional shikimate kinase (N-terminal) / dehydroquinate
synthase (C-terminal) enzyme [Methylobacterium
extorquens AM1]
gi|373566695|gb|EHP92685.1| 3-dehydroquinate synthase [Methylobacterium extorquens DSM 13060]
Length = 579
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 89/159 (55%), Gaps = 11/159 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I LVG+MG+GK+TVG+ L+G LG F D D IE + ++A+IF +YGE FR
Sbjct: 23 LGARSIVLVGLMGAGKSTVGRRLAGRLGLMFKDADHEIEAAAK-LTIADIFSIYGEASFR 81
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
E E V+ +L +V++TGGGA R R + ISVWL L+ L +R+ +
Sbjct: 82 EGEERVIARLLREGPMVLATGGGAFMREATRARIAEGAISVWLKADLDVLMRRVRK--RN 139
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
+RPLL Q E +A + TL E R YA A+ V
Sbjct: 140 TRPLL-QTEDPEAT------MRTLMEVRHPVYAQADVTV 171
>gi|163851068|ref|YP_001639111.1| shikimate kinase., 3-dehydroquinate synthase [Methylobacterium
extorquens PA1]
gi|163662673|gb|ABY30040.1| Shikimate kinase., 3-dehydroquinate synthase [Methylobacterium
extorquens PA1]
Length = 604
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 89/159 (55%), Gaps = 11/159 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I LVG+MG+GK+TVG+ L+G LG F D D IE + ++A+IF +YGE FR
Sbjct: 48 LGARSIVLVGLMGAGKSTVGRRLAGRLGLMFKDADHEIEAAAK-LTIADIFSIYGEASFR 106
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
E E V+ +L +V++TGGGA R R + ISVWL L+ L +R+ +
Sbjct: 107 EGEERVIARLLREGPMVLATGGGAFMREATRARIAEGAISVWLKADLDVLMRRVRK--RN 164
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
+RPLL Q E +A + TL E R YA A+ V
Sbjct: 165 TRPLL-QTEDPEAT------MRTLMEVRHPVYAQADVTV 196
>gi|395791705|ref|ZP_10471161.1| shikimate kinase [Bartonella alsatica IBS 382]
gi|395408008|gb|EJF74628.1| shikimate kinase [Bartonella alsatica IBS 382]
Length = 210
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 29/218 (13%)
Query: 35 HAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQ 94
H PI + +KN ++ L R + VG+MG+GK+ +GK ++ +L F+D D IE+
Sbjct: 8 HIPITQ---IKN---QLLSSLDKRALVFVGLMGAGKSVIGKRVATMLHLPFYDSDQEIEK 61
Query: 95 SVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGIS 153
V + EIFK+YGE FR E V+ L LV++TGGGA + + I Q GIS
Sbjct: 62 VVQ-MKITEIFKIYGEPKFRALEQRVILNLIKKSPLVLATGGGAYINQAIQKAIHQNGIS 120
Query: 154 VWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
+WL L+ L +R++ T RPLL + + L EER Y AN ++
Sbjct: 121 IWLKADLDTLMRRVSRHPT--RPLLQTANPKET-------MRKLMEERYPIYGKANLTIN 171
Query: 214 LENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEEDD 251
HK+ + T+A + ++ +L E++
Sbjct: 172 --------SHKE----SRFTVAKNVVRSVQHYLDTENN 197
>gi|52076607|dbj|BAD45509.1| unknown protein [Oryza sativa Japonica Group]
Length = 265
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 103/197 (52%), Gaps = 8/197 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IY+VG + K + K+L+ + Y + + L+E + G F+ + E ETE
Sbjct: 74 IYIVGTDCTAKRNIAKLLANSIIYRYLCSEELLEDVLGGKDALNAFRESDLNGYLEVETE 133
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
L++L+ M LV+ G GAV N ++ G+S+W+D+PLE + + S P
Sbjct: 134 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDIPLELVVNDMLKTQATSDP--- 190
Query: 180 QCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEAL 239
D+++EA++R+ +E E Y ++ VS++N+A +LG+ + S+T + +E +
Sbjct: 191 -----DSFSEAMSRVRQRHDELKERYGVSDITVSVQNVASQLGYSSIDSVTLEDMVLEIV 245
Query: 240 EQIEGFLKEEDDMAIAG 256
QIE ++ + M AG
Sbjct: 246 RQIERLIRAKSMMEAAG 262
>gi|395764837|ref|ZP_10445457.1| shikimate kinase [Bartonella sp. DB5-6]
gi|395413654|gb|EJF80116.1| shikimate kinase [Bartonella sp. DB5-6]
Length = 210
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 104/198 (52%), Gaps = 23/198 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + LVG+MG+GK+ +GK ++ +L F+D D IE++ T + E+F+ YGE FR
Sbjct: 22 LDTRALVLVGLMGAGKSVIGKRVATILHLPFYDSDQEIEKAAQMT-ITELFETYGEPEFR 80
Query: 115 EKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
E V+ L + LV++TGGGA + + I Q GIS+WL V L+ L +R++ T
Sbjct: 81 ALEQRVILNLIKKKPLVLATGGGAYINQNIRKAIHQNGISIWLKVDLDILMKRVSRCPT- 139
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
RPLL Q E+ + L E+R YA AN ++ HK+ T
Sbjct: 140 -RPLL-QTENPKE------TMQKLMEQRYPIYAKANLTIN--------SHKENRH----T 179
Query: 234 IAIEALEQIEGFLKEEDD 251
IA + ++ +L E++
Sbjct: 180 IAKNVIRSVQHYLFTENN 197
>gi|407786293|ref|ZP_11133439.1| shikimate kinase [Celeribacter baekdonensis B30]
gi|407202025|gb|EKE72021.1| shikimate kinase [Celeribacter baekdonensis B30]
Length = 182
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 102/194 (52%), Gaps = 21/194 (10%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + LVGMMG+GKT VGK ++ L F D D IE++ SVAEIF GE FFR++E
Sbjct: 7 KTVALVGMMGAGKTAVGKAMAARLSVPFLDSDAEIEKAA-AMSVAEIFSRDGEAFFRQRE 65
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
EV+ +L +Q V+STGGGA +N + K G++VWL L L R+ T RP
Sbjct: 66 AEVIARLLETQQAVLSTGGGAFLAEVNRNIIAKNGVAVWLKADLNILWNRVRHKST--RP 123
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLE-NIAVKLGHKDVSSLTPVTIA 235
LL + + Y L +L + R YA A V E N++++ V
Sbjct: 124 LLR---TENPY----ETLKSLVKAREPFYAKAGIIVDAEPNLSIEAMADKV--------- 167
Query: 236 IEALEQIEGFLKEE 249
I+AL + G LKE+
Sbjct: 168 IDALARHGGILKED 181
>gi|242083840|ref|XP_002442345.1| hypothetical protein SORBIDRAFT_08g018630 [Sorghum bicolor]
gi|241943038|gb|EES16183.1| hypothetical protein SORBIDRAFT_08g018630 [Sorghum bicolor]
Length = 273
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 106/198 (53%), Gaps = 7/198 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IY+VG + K + K+L+ + Y + + L+E + G FK E + E ETE
Sbjct: 79 IYIVGTDCTAKRNIAKLLANSIIYRYLCSEELLEDVLGGKDALRAFKESDEKGYLEVETE 138
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQ-RIAAVGTDSRPLL 178
L++L+ M LV+ G GAV N ++ G+S+W+DVPLE A + + GT
Sbjct: 139 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLEMAANDMLKSTGT------ 192
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
D++++A+++L ++E E Y ++ VS++++A + G+ V S+T + +E
Sbjct: 193 QATTDPDSFSQAMSKLRQRYDELKERYGVSDITVSVQSVASQRGYSSVDSVTLEDMVLEI 252
Query: 239 LEQIEGFLKEEDDMAIAG 256
+ QIE ++ ++ M AG
Sbjct: 253 VRQIEKLIRAKEMMEAAG 270
>gi|114762818|ref|ZP_01442250.1| shikimate kinase [Pelagibaca bermudensis HTCC2601]
gi|114544428|gb|EAU47435.1| shikimate kinase [Roseovarius sp. HTCC2601]
Length = 192
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 89/160 (55%), Gaps = 11/160 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + LVGMMG+GKT VGK L+ L F D D IE + + T +AEIF GE FFR+KE
Sbjct: 15 KTVVLVGMMGAGKTAVGKALAAALHVPFRDSDAEIELAANMT-IAEIFSRDGEPFFRQKE 73
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
++V+ +L V+STGGGA N + + ++G++VWLD L L R+ ++RP
Sbjct: 74 SQVISRLLDGTPSVLSTGGGAYMSAANRKMITERGVAVWLDAALPVLWNRVK--HKNTRP 131
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
LL + E ++E+R YA A+ V+ E
Sbjct: 132 LLRTPDPHATLRE-------IYEQRVPVYAMADVTVTSEQ 164
>gi|77163787|ref|YP_342312.1| shikimate kinase [Nitrosococcus oceani ATCC 19707]
gi|254436246|ref|ZP_05049753.1| shikimate kinase [Nitrosococcus oceani AFC27]
gi|115312155|sp|Q3JEG4.1|AROK_NITOC RecName: Full=Shikimate kinase; Short=SK
gi|76882101|gb|ABA56782.1| shikimate kinase [Nitrosococcus oceani ATCC 19707]
gi|207089357|gb|EDZ66629.1| shikimate kinase [Nitrosococcus oceani AFC27]
Length = 190
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 22/187 (11%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVG MGSGKTT+G+ L+ + G +F+D D IE S G S+ IF++ GE FR++E +
Sbjct: 6 IFLVGPMGSGKTTIGRYLARITGKNFYDSDREIE-SRTGVSIPVIFEIEGESGFRQRECK 64
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ +L + +V++TGGGAV N R + Q+GI V+L P + L +R + ++RPLL
Sbjct: 65 IIAELVQLNNIVLATGGGAVLAAENRRELSQRGIVVYLYAPPKQLYRRTSH--DNNRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
+G+ L RL L +ER Y + ++ +K G + V + +A E
Sbjct: 123 R---TGN----PLERLKCLLKERDPLYR------EVADVIIKTGKQPVKA-----VANEV 164
Query: 239 LEQIEGF 245
L Q+ +
Sbjct: 165 LRQLRQY 171
>gi|94495772|ref|ZP_01302352.1| Shikimate kinase [Sphingomonas sp. SKA58]
gi|94425160|gb|EAT10181.1| Shikimate kinase [Sphingomonas sp. SKA58]
Length = 182
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 53 PYLSGR--CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGE 110
P+ GR I LVGMMG GK+TVG+ L+ LG +F D D IE++ D SV+EIF+ YGE
Sbjct: 8 PHSPGRRGPIVLVGMMGVGKSTVGRRLAARLGLAFVDADEEIEKAAD-MSVSEIFERYGE 66
Query: 111 GFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAA 169
+FR+ E V+ +L V++TGGGA + R + I++WLD ++ L R++
Sbjct: 67 AYFRDGERRVIARLLDGAPKVIATGGGAFMQDETRRLILDAAIAIWLDADIDILVDRVSR 126
Query: 170 VGTDSRPLLHQCESGDAYTE 189
DSRPLL + TE
Sbjct: 127 --RDSRPLLKDRDPRTVLTE 144
>gi|49476287|ref|YP_034328.1| shikimate kinase [Bartonella henselae str. Houston-1]
gi|81647491|sp|Q6G1N9.1|AROK_BARHE RecName: Full=Shikimate kinase; Short=SK
gi|49239095|emb|CAF28398.1| Shikimate kinase [Bartonella henselae str. Houston-1]
Length = 210
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 110/218 (50%), Gaps = 29/218 (13%)
Query: 35 HAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQ 94
H PI + +KN ++ L R + L+G+MG GK+ +GK ++ +L F+D D IE+
Sbjct: 8 HIPITK---IKN---QLLSSLDNRALVLIGLMGVGKSVIGKRIATMLCLPFYDSDQEIEK 61
Query: 95 SVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGIS 153
+ T + E+FK YGE FR E V+ L R LV++TGGGA + I + GIS
Sbjct: 62 AAQMT-ITELFKTYGESEFRALEQRVILNLMKNRPLVLATGGGAYINEDIRKAVHKNGIS 120
Query: 154 VWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
+WL V L+ L QR++ T RPLL Q E+ + L ++R YA AN ++
Sbjct: 121 IWLKVDLDTLMQRVSKRPT--RPLL-QTENPKET------MQKLMKQRYPIYAKANLTIN 171
Query: 214 LENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEEDD 251
HK+ T+A + ++ +L E +
Sbjct: 172 --------SHKENRQ----TVAQNVIRSVQHYLDTEKN 197
>gi|407773807|ref|ZP_11121107.1| shikimate kinase [Thalassospira profundimaris WP0211]
gi|407283253|gb|EKF08794.1| shikimate kinase [Thalassospira profundimaris WP0211]
Length = 213
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 101/178 (56%), Gaps = 11/178 (6%)
Query: 33 NVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLI 92
N+ + I E+ + ++ +I L GR + +G+MG+GK+ +G++++ L F D D I
Sbjct: 10 NMDSNIAESGLHEDVIAKIRDGLKGRTLVFIGLMGAGKSCIGRMVAKELKLDFVDADREI 69
Query: 93 EQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRY-MQKG 151
E++ G S+A+IFKLYGE FR+ E V+ +L Q+V++TGGGA R + ++K
Sbjct: 70 EEAA-GCSIADIFKLYGEEAFRDGEERVIARLLDGEQIVLATGGGAFIRERTRQLILEKS 128
Query: 152 ISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
+SVWL L+ L R + G RPLL+ +GD L+ L E R Y+ A+
Sbjct: 129 VSVWLRADLDLLMHRTS--GRTHRPLLN---NGDPR----QILADLIETRYPVYSGAD 177
>gi|83955535|ref|ZP_00964166.1| shikimate kinase [Sulfitobacter sp. NAS-14.1]
gi|83840179|gb|EAP79354.1| shikimate kinase [Sulfitobacter sp. NAS-14.1]
Length = 196
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 92/173 (53%), Gaps = 11/173 (6%)
Query: 42 QVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSV 101
Q + +Q Y + + +VGMMG+GKT VG+ L+ LG F D D IE + + T V
Sbjct: 6 QSPADTAQNTPRYHLKKTVVMVGMMGAGKTAVGRALAAKLGVPFVDSDHEIEAAANLT-V 64
Query: 102 AEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPL 160
EIF+ GE FFR++ETEV+ +L ++STGGGA N + +G+SVWLD L
Sbjct: 65 PEIFERDGEPFFRKRETEVISRLLDKEPGILSTGGGAFLAEANRENISARGVSVWLDADL 124
Query: 161 EALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
+ L R+ SRPLL + TE L+E+R Y A+ V+
Sbjct: 125 DLLWNRVRY--KTSRPLLRTADPRGTLTE-------LYEKRVPIYRLADMTVA 168
>gi|149913842|ref|ZP_01902374.1| shikimate kinase [Roseobacter sp. AzwK-3b]
gi|149812126|gb|EDM71957.1| shikimate kinase [Roseobacter sp. AzwK-3b]
Length = 206
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + LVGMMG+GKT VGK L+ L F D D IEQ+ + S+AEIF GE FFR++E
Sbjct: 31 KTVVLVGMMGAGKTAVGKALAVRLAVPFLDSDAEIEQAAN-MSIAEIFARDGEAFFRDRE 89
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
T+V+ +L + ++STGGGA N + +KG+SVWL L L R+ D+RP
Sbjct: 90 TQVIDRLLEGERGILSTGGGAFLSERNRNLISRKGVSVWLKADLALLWSRVKH--KDTRP 147
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
LL + D Y L L+E R Y A+ V+
Sbjct: 148 LLR---TADPY----GTLRDLYETRLPFYQEADLTVT 177
>gi|49474799|ref|YP_032841.1| shikimate kinase [Bartonella quintana str. Toulouse]
gi|81647443|sp|Q6G1H5.1|AROK_BARQU RecName: Full=Shikimate kinase; Short=SK
gi|49240303|emb|CAF26785.1| Shikimate kinase [Bartonella quintana str. Toulouse]
Length = 210
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 21/182 (11%)
Query: 35 HAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQ 94
H PI + + +++ L R + LVG+MG+GK+ +GK ++ +LG F+D D IE+
Sbjct: 8 HIPITQIK------KQLLSSLDKRALVLVGLMGAGKSVIGKRIATMLGLPFYDSDQEIEK 61
Query: 95 SVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQ--LVVSTGGGA-VTRPINWRYMQKG 151
+ T + E FK+YGE FR E V LSLM++ LV++TGGGA + I + G
Sbjct: 62 AAQMT-ITEFFKVYGESEFRALEQHV--TLSLMKKSPLVLATGGGAYINEDIRQVINKNG 118
Query: 152 ISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANAR 211
IS+WL L+ L +R++ T RPLL + + L E+R YA AN
Sbjct: 119 ISIWLKADLDILMKRVSRHPT--RPLLQTANPKET-------MKKLMEQRYPIYAKANLT 169
Query: 212 VS 213
++
Sbjct: 170 IN 171
>gi|451823409|ref|YP_007459683.1| shikimate kinase [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
gi|451776209|gb|AGF47250.1| shikimate kinase [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
Length = 206
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 96/176 (54%), Gaps = 16/176 (9%)
Query: 31 SGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDT 90
S +H ID V+ K I+L+GMMG+GK+TVG+ L+ +G F D D+
Sbjct: 17 SKAIHQSIDNNNVISKKYSN-----KNTSIFLIGMMGAGKSTVGRCLAQYIGKKFVDLDS 71
Query: 91 LIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK 150
IE + G ++ IF++ GE FR++ET++LQK+SL + +V++TGGGAV N +
Sbjct: 72 EIEIAC-GVNIPVIFEIEGEDGFRKRETDILQKISLEKNIVLATGGGAVLAEDNRHLLTS 130
Query: 151 -GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
GI V+L ++ L +R++ +RPLL A + ++ L E R Y
Sbjct: 131 GGIVVYLQANIDVLFKRVSV--DQNRPLL-------AIKDPYVKIKELLEIRDPIY 177
>gi|149184269|ref|ZP_01862587.1| shikimate kinase [Erythrobacter sp. SD-21]
gi|148831589|gb|EDL50022.1| shikimate kinase [Erythrobacter sp. SD-21]
Length = 189
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 92/159 (57%), Gaps = 17/159 (10%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R + LVG+MG GK+T+G+ L+ L F D D IE++ + SVAEIF+ +GE +FR+ E
Sbjct: 22 RPLVLVGLMGVGKSTIGRRLATALERDFVDADEEIERAAN-RSVAEIFEAHGEAYFRDGE 80
Query: 118 TEVLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
V+ +L V++TGGGA TR + +++G+++WLD L+ L +R + D
Sbjct: 81 RRVIARLMEEGHGVIATGGGAFVDDETRAL---VLEQGLAIWLDCDLDTLVERTSR--KD 135
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
+RPLL +SGD T L L E R AYA A V
Sbjct: 136 TRPLL---KSGDPRTI----LRDLKERRSAAYAQAQVHV 167
>gi|255320221|ref|ZP_05361406.1| shikimate kinase [Acinetobacter radioresistens SK82]
gi|255302660|gb|EET81892.1| shikimate kinase [Acinetobacter radioresistens SK82]
Length = 183
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 79/121 (65%), Gaps = 4/121 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D +E+ G ++ IF+ GE FR +ET
Sbjct: 12 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHELERKT-GANIPWIFEKEGEAGFRSRETA 70
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ +L+L ++LV++TGGGAVT+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 71 VIDQLTLRQKLVLATGGGAVTQAPNREFLKQRGIVVYLYTPVEIQLQR--TYRDKNRPLL 128
Query: 179 H 179
Sbjct: 129 Q 129
>gi|83313025|ref|YP_423289.1| shikimate kinase [Magnetospirillum magneticum AMB-1]
gi|115312151|sp|Q2W095.1|AROK_MAGMM RecName: Full=Shikimate kinase; Short=SK
gi|82947866|dbj|BAE52730.1| Shikimate kinase [Magnetospirillum magneticum AMB-1]
Length = 195
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 93/172 (54%), Gaps = 14/172 (8%)
Query: 42 QVLKNKSQEIEPYLSGR---CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDG 98
Q + ++ + P LSGR I LVG+MG+GK+ VG+ L+ LG F D D E + G
Sbjct: 3 QGMADELARLAPLLSGRIGRTIVLVGLMGAGKSCVGRRLAARLGLDFVDSDAEFE-AASG 61
Query: 99 TSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINW-RYMQKGISVWLD 157
+S+++ F +GE FRE E +V+ +L +V++TGGGA P R G SVW+
Sbjct: 62 SSISDYFARFGEAAFREGERKVIARLLDGPPVVLATGGGAFVDPTTRERIKAAGTSVWIR 121
Query: 158 VPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LE L +R VG D RPLL Q GD E L R L E R YA A+
Sbjct: 122 ADLELLLKR--TVGRDHRPLLKQ---GDP-REILGR---LMEARYPIYAEAD 164
>gi|170740411|ref|YP_001769066.1| shikimate kinase [Methylobacterium sp. 4-46]
gi|168194685|gb|ACA16632.1| Shikimate kinase [Methylobacterium sp. 4-46]
Length = 201
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I LVG+MG+GK+TVG+ L+G LG F D D IE + G ++A+IF +YGE FR
Sbjct: 19 LGQRSIVLVGLMGAGKSTVGRRLAGRLGMIFMDADHEIEAAA-GLTIADIFAIYGETSFR 77
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
+ E V+ +L +V++TGGGA RP R + G+SVWL L+ L +R+
Sbjct: 78 DGEERVIARLLRDGPMVLATGGGAFMRPETRRRIAEAGVSVWLKAELDVLMRRVRK--RP 135
Query: 174 SRPLLH 179
RPLL
Sbjct: 136 GRPLLQ 141
>gi|259416680|ref|ZP_05740600.1| shikimate kinase [Silicibacter sp. TrichCH4B]
gi|259348119|gb|EEW59896.1| shikimate kinase [Silicibacter sp. TrichCH4B]
Length = 196
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 91/172 (52%), Gaps = 11/172 (6%)
Query: 42 QVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSV 101
Q+ ++ P + I LVGMMG+GKT VG+ L+ L F D D IE + + S+
Sbjct: 6 QITDATAESCAPGKLKKTIVLVGMMGAGKTAVGRALAARLDVPFLDSDHEIEAAAN-MSI 64
Query: 102 AEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPL 160
EIF GE FFREKE +V+ +L V+STGGGA N M + G+SV L L
Sbjct: 65 PEIFARDGEPFFREKEHQVITRLLKEECGVLSTGGGAFLAERNRTVMSEAGVSVCLQADL 124
Query: 161 EALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
+ L +R+ G D+RPLL S D Y LS L+ R YA A+ +V
Sbjct: 125 DVLWKRVK--GRDTRPLLR---SPDPYKS----LSDLYHARVPIYAQADLKV 167
>gi|93006992|ref|YP_581429.1| shikimate kinase [Psychrobacter cryohalolentis K5]
gi|122414838|sp|Q1Q8Q8.1|AROK_PSYCK RecName: Full=Shikimate kinase; Short=SK
gi|92394670|gb|ABE75945.1| shikimate kinase [Psychrobacter cryohalolentis K5]
Length = 186
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 77/123 (62%), Gaps = 4/123 (3%)
Query: 59 CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKET 118
++LVG MG+GKTT+G++L+ LG SF D D IE S G +A IF GE FRE+ET
Sbjct: 7 SVFLVGPMGAGKTTIGRLLAKQLGRSFVDSDWYIE-SQTGADIAWIFAKEGEAGFRERET 65
Query: 119 EVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPL 177
+ +L+ Q+V++TGGGAV N Y+ Q+GI ++L+ P++ R A SRPL
Sbjct: 66 RAIDELTQQPQIVLATGGGAVMAAENREYLKQRGIVIYLNAPVDVQMARTAK--DKSRPL 123
Query: 178 LHQ 180
L Q
Sbjct: 124 LQQ 126
>gi|58040219|ref|YP_192183.1| bifunctional shikimate kinase [Gluconobacter oxydans 621H]
gi|58002633|gb|AAW61527.1| Bifunctional shikimate kinase [Gluconobacter oxydans 621H]
Length = 563
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 92/171 (53%), Gaps = 22/171 (12%)
Query: 48 SQEIEPYLS-----GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVA 102
S + EP+ S R + LVGMMG+GKTT+G+ L+ + G F D D IE++ G S+
Sbjct: 9 SAKPEPFFSPDGIPSRTVVLVGMMGAGKTTIGRRLAQICGLPFVDADIEIERAA-GCSIP 67
Query: 103 EIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGG----AVTRPINWRYMQKGISVWLDV 158
EIF +GE FR+ E V+Q+L +++TGGG A TR + R+ +SVWL
Sbjct: 68 EIFARHGEASFRDGERRVIQRLLDGPPCILATGGGAWMDAQTRHLVRRH---AVSVWLRA 124
Query: 159 PLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
P+ L +R+A G RPLL Q E L RL L R YA A+
Sbjct: 125 PVHVLVKRVA--GRAGRPLLAQGRP----DEVLERLVGL---RYPVYAEAD 166
>gi|302344636|ref|YP_003809165.1| shikimate kinase., 3-dehydroquinate synthase [Desulfarculus baarsii
DSM 2075]
gi|301641249|gb|ADK86571.1| Shikimate kinase., 3-dehydroquinate synthase [Desulfarculus baarsii
DSM 2075]
Length = 520
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 85/160 (53%), Gaps = 13/160 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L G MGSGK+TVG +L+ +G F D D+ + + G +AE+F GE FR+ E+
Sbjct: 5 IFLTGFMGSGKSTVGALLARAMGRKFVDMDSELTRHF-GQPIAEVFAQRGEAAFRQAESA 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK--GISVWLDVPLEALAQRIAAVGTDSRPL 177
+L +LS R LV +TGGG P N M+ G VWL LE A+R+ + T +RPL
Sbjct: 64 LLARLSRRRGLVAATGGGVAANPANRALMRADGGRIVWLRAGLEHCARRLGPLETAARPL 123
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
+ + L+ +R EAYA+ + V E +
Sbjct: 124 WRDAAA----------VERLFAQRQEAYADCDHAVDTEGL 153
>gi|451942712|ref|YP_007463349.1| shikimate kinase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
gi|451902099|gb|AGF76561.1| shikimate kinase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
Length = 210
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 23/198 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + LVG+MG+GKT +G+ ++ +L F+D D IE++ T + E+FK+YGE FR
Sbjct: 22 LDKRALVLVGLMGAGKTVIGQRIATMLDLPFYDSDQEIEKAAQMT-ITELFKIYGEAEFR 80
Query: 115 EKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
E V+ L LV++TGGGA + I Q GIS+WL V L+ L +R+ +
Sbjct: 81 ALEQRVVLNLIKKSPLVLATGGGAYMNENIRKAIHQNGISIWLKVDLDILMKRV--LRRP 138
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
+RPLL + + L ++R YA AN ++ HK+ T
Sbjct: 139 TRPLLQTANPKET-------MQKLIKQRNPIYAKANLTIN--------SHKESRH----T 179
Query: 234 IAIEALEQIEGFLKEEDD 251
+A + I+ +L E +
Sbjct: 180 VAQNVIRSIQHYLYTESN 197
>gi|317121066|ref|YP_004101069.1| 3-dehydroquinate synthase [Thermaerobacter marianensis DSM 12885]
gi|315591046|gb|ADU50342.1| 3-dehydroquinate synthase [Thermaerobacter marianensis DSM 12885]
Length = 660
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 75/120 (62%), Gaps = 2/120 (1%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I LVG+MG+GKTTVG+ L+ LG++F D D LIEQ G +VA++F GE FR +E +
Sbjct: 3 IVLVGLMGAGKTTVGRALAARLGWAFLDLDDLIEQEA-GQTVADLFAREGEAGFRTREEQ 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
L + ++V++TGGGAV N R + WL+ P + LA+R+A G +RPLL
Sbjct: 62 ALATALTLERVVLATGGGAVLSARNRQRLAAEPWVFWLEAPPDELARRLAGPGAAARPLL 121
>gi|238022252|ref|ZP_04602678.1| hypothetical protein GCWU000324_02159 [Kingella oralis ATCC 51147]
gi|237866866|gb|EEP67908.1| hypothetical protein GCWU000324_02159 [Kingella oralis ATCC 51147]
Length = 178
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 88/148 (59%), Gaps = 13/148 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++LVG+MG+GKTT GK L+ L +FFD D +I + G + IF++ GE FR +E+
Sbjct: 8 LFLVGLMGAGKTTQGKRLAQHLNRTFFDSDQVICERT-GVDIPTIFEMEGEAGFRNRESN 66
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD-SRPL 177
++ +LSL+ +V++TGGGAV R N Y+ Q+G+ V+L V E L +R VG D +RPL
Sbjct: 67 IINELSLLPNIVLATGGGAVLREQNRDYLRQRGLVVYLHVQPETLFER---VGKDRNRPL 123
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAY 205
L +AL + L+ R Y
Sbjct: 124 LQ-------VQDALAKFRDLYRARDAIY 144
>gi|403531105|ref|YP_006665634.1| shikimate kinase [Bartonella quintana RM-11]
gi|403233176|gb|AFR26919.1| shikimate kinase [Bartonella quintana RM-11]
Length = 210
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 21/182 (11%)
Query: 35 HAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQ 94
H PI + + +++ L R + LVG+MG+GK+ +GK ++ +LG F+D D IE+
Sbjct: 8 HIPITQIK------KQLLSSLDKRALVLVGLMGAGKSVIGKRIATMLGLPFYDSDQEIEK 61
Query: 95 SVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQ--LVVSTGGGA-VTRPINWRYMQKG 151
+ T + E FK+YGE FR E V LSLM++ LV++TGGGA + I + G
Sbjct: 62 AAQMT-IIEFFKVYGESEFRALEQHV--TLSLMKKSPLVLATGGGAYINEDIRQVINKNG 118
Query: 152 ISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANAR 211
IS+WL L+ L +R++ T RPLL + + L E+R YA AN
Sbjct: 119 ISIWLKADLDILMKRVSRHPT--RPLLQTANPKET-------MKKLMEQRYPIYAKANLT 169
Query: 212 VS 213
++
Sbjct: 170 IN 171
>gi|114771056|ref|ZP_01448496.1| shikimate kinase [Rhodobacterales bacterium HTCC2255]
gi|114548338|gb|EAU51224.1| shikimate kinase [alpha proteobacterium HTCC2255]
Length = 186
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 54 YLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFF 113
Y + I L+G+MG+GKT +G IL+ LG F D D I ++ + S+ EIF GE FF
Sbjct: 3 YNLSKTIVLIGLMGAGKTAIGTILAEHLGVDFVDSDEEISRAAN-MSIPEIFDRDGEDFF 61
Query: 114 REKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGT 172
R KET+++ +L R ++STGGGA N + + +SVWLD LE L R+
Sbjct: 62 RLKETQIIGRLLGSRPHILSTGGGAFLSNENRKMISGNAVSVWLDAELETLWDRVKE--K 119
Query: 173 DSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
SRPLL + A L L+ R YA AN RV
Sbjct: 120 KSRPLLMVKDPKTA-------LKNLYISRKPQYAKANIRV 152
>gi|389873926|ref|YP_006381345.1| shikimate kinase [Advenella kashmirensis WT001]
gi|388539175|gb|AFK64363.1| shikimate kinase [Advenella kashmirensis WT001]
Length = 191
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 84/141 (59%), Gaps = 4/141 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L+GMMG+GKTT+G+ L+ LG F D D +E G S+ IF + GE FR +ET+
Sbjct: 19 IFLIGMMGAGKTTIGRGLARSLGREFLDLDHELEARC-GVSIPTIFDIEGEAGFRRRETQ 77
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VLQ+++L R +V++TGGGAV P N ++ +GI ++L + L +R+A +RP+L
Sbjct: 78 VLQEITLRRDVVLATGGGAVVAPENQELLRARGIVLYLKAGSDELFRRVAK--DKNRPML 135
Query: 179 HQCESGDAYTEALNRLSTLWE 199
E L + ++E
Sbjct: 136 LTANPKARIVELLKQREPIYE 156
>gi|341615147|ref|ZP_08702016.1| shikimate kinase [Citromicrobium sp. JLT1363]
Length = 190
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 26/188 (13%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I LVG+MG GKTTVG+ L+ +LG SF D D IE++ SVAEIF +GE +FR+ E
Sbjct: 22 RPIVLVGLMGVGKTTVGRRLANLLGRSFVDADEAIEEAAR-LSVAEIFSQFGEPYFRDGE 80
Query: 118 TEVLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
V+ +L V++TGGGA TR + +++ ++ W+D + L +R + D
Sbjct: 81 RRVIARLIEEDHGVIATGGGAFVDDETRAL---ILERAVAAWIDCDIRTLVERTSR--RD 135
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
RPLL SGD E L+RL ER YA A+ RV G K + T
Sbjct: 136 HRPLLR---SGDP-EEILSRLM---REREGFYAQAHVRVE--------GQKGPQTHTAWA 180
Query: 234 IAIEALEQ 241
I IE +EQ
Sbjct: 181 I-IEGIEQ 187
>gi|303256507|ref|ZP_07342521.1| shikimate kinase [Burkholderiales bacterium 1_1_47]
gi|331001158|ref|ZP_08324787.1| shikimate kinase [Parasutterella excrementihominis YIT 11859]
gi|302859998|gb|EFL83075.1| shikimate kinase [Burkholderiales bacterium 1_1_47]
gi|329569279|gb|EGG51065.1| shikimate kinase [Parasutterella excrementihominis YIT 11859]
Length = 182
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 93/165 (56%), Gaps = 14/165 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVGMMG+GK+T+GK L+ ++G F D D +E+ G S+ IF+ GE FR +E
Sbjct: 8 RTIFLVGMMGAGKSTIGKALAALMGTKFVDLDRELEERC-GVSIPHIFETEGEAGFRCRE 66
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ--KGISVWLDVPLEALAQRIAAVGTDSR 175
T +LQ+ + +VV+TGGG VTR N ++ ++V L V E +R GTD R
Sbjct: 67 TRLLQEYAKASDMVVATGGGVVTREENREILKASPAVAVHLKVSPEECFRRTQ--GTD-R 123
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 220
PLL QC + + ++ L +ERG Y A +S E +K
Sbjct: 124 PLL-QC------ADPMEKICRLLQERGPLYEEV-ADISYETDGMK 160
>gi|420157803|ref|ZP_14664631.1| shikimate kinase [Clostridium sp. MSTE9]
gi|394755631|gb|EJF38830.1| shikimate kinase [Clostridium sp. MSTE9]
Length = 174
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 74/122 (60%), Gaps = 4/122 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L G MGSGKTTVG++L+ G FFD D IEQ G ++++IF GE FR ETE
Sbjct: 5 IVLCGFMGSGKTTVGQVLAQKSGRRFFDLDQYIEQR-QGKTISQIFADEGEQTFRRLETE 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+KLS + LV++TGGGAV R N + Q G+ V LD L+ L +R+ G RPLL
Sbjct: 64 AARKLSSQKDLVIATGGGAVLREENVDILRQNGVIVLLDASLDTLERRLD--GVSDRPLL 121
Query: 179 HQ 180
+
Sbjct: 122 QR 123
>gi|406981055|gb|EKE02576.1| Shikimate kinase [uncultured bacterium]
Length = 171
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 11/161 (6%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
+ I L G+MGSGK+TVG +++ LG F D D LIE+ ++ EIF YGE +FRE
Sbjct: 2 AKNIVLTGLMGSGKSTVGSLIAQKLGKIFVDTDKLIEEDAQ-ININEIFAQYGEAYFREL 60
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSR 175
E ++++++S V+STGGG + P N + ++ G +L + L +RI ++R
Sbjct: 61 EAKIIKRVSPNSDQVISTGGGTLINPDNLKNLKDNGALFYLKASAKTLFERIK--NENNR 118
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
PLL + L+ L L E+R E Y A+ ++ EN
Sbjct: 119 PLLKN-------NDPLSTLEKLLEKREEFYNQADFIINTEN 152
>gi|262380437|ref|ZP_06073591.1| shikimate kinase [Acinetobacter radioresistens SH164]
gi|421855216|ref|ZP_16287596.1| shikimate kinase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
gi|262297883|gb|EEY85798.1| shikimate kinase [Acinetobacter radioresistens SH164]
gi|403189227|dbj|GAB73797.1| shikimate kinase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
Length = 183
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 79/121 (65%), Gaps = 4/121 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D +E+ G ++ IF+ GE FR +ET
Sbjct: 12 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHELERKT-GANIPWIFEKEGEAGFRSRETA 70
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ +L+L ++LV++TGGGAVT+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 71 VIDQLTLRQKLVLATGGGAVTQVPNREFLKQRGIVVYLYTPVEIQLQR--TYRDKNRPLL 128
Query: 179 H 179
Sbjct: 129 Q 129
>gi|77463392|ref|YP_352896.1| shikimate kinase [Rhodobacter sphaeroides 2.4.1]
gi|429206448|ref|ZP_19197714.1| Shikimate kinase I [Rhodobacter sp. AKP1]
gi|124053400|sp|Q3J2I9.1|AROK_RHOS4 RecName: Full=Shikimate kinase; Short=SK
gi|77387810|gb|ABA78995.1| shikimate kinase [Rhodobacter sphaeroides 2.4.1]
gi|428190489|gb|EKX59035.1| Shikimate kinase I [Rhodobacter sp. AKP1]
Length = 181
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 92/170 (54%), Gaps = 16/170 (9%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + +VGMMG+GKT VG L+ L F D D IE++ + T +AEIF GE FFREKE
Sbjct: 7 KTVVMVGMMGAGKTAVGSALARGLNVPFLDSDEEIERAANRT-IAEIFARDGEPFFREKE 65
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
++VL +L V+STGGGA N R + ++G+SVWL L+ L R+ T RP
Sbjct: 66 SQVLARLLRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWLKADLDVLWHRVRHKAT--RP 123
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 221
LL + L L E R YA A+ V ++E +AV++
Sbjct: 124 LLRTPNPRET-------LRALLEARDPVYAQADLAVESGEGTVEQMAVRV 166
>gi|84502969|ref|ZP_01001071.1| shikimate kinase [Oceanicola batsensis HTCC2597]
gi|84388714|gb|EAQ01585.1| shikimate kinase [Oceanicola batsensis HTCC2597]
Length = 181
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I +VGMMG+GKT VG+ L+ LG F D D IE + + S+AEIF GE FFR +E
Sbjct: 7 KTIVMVGMMGAGKTAVGRALAAELGVPFLDSDHEIEAAAN-MSIAEIFDRDGEAFFRARE 65
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
TEV+Q+L V+STGGGA N + KG++VWL+ LE L R+ D+RP
Sbjct: 66 TEVIQRLLESAPCVLSTGGGAYLAERNRGLISDKGLAVWLNADLELLWNRVRH--RDTRP 123
Query: 177 LLH 179
LL
Sbjct: 124 LLR 126
>gi|304394163|ref|ZP_07376086.1| shikimate kinase [Ahrensia sp. R2A130]
gi|303293603|gb|EFL87980.1| shikimate kinase [Ahrensia sp. R2A130]
Length = 205
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 95/171 (55%), Gaps = 11/171 (6%)
Query: 43 VLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVA 102
V+ ++S I L GR I LVG+MG GK+T+GK LS L F D D IE++ G SV
Sbjct: 13 VIADRSSTIRRALGGRSIVLVGIMGVGKSTIGKRLSQYLDIEFVDADKEIEKAA-GMSVQ 71
Query: 103 EIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLE 161
+IF +GE FR E +V+++L Q +++TGGGA + I + G+SVWL+ ++
Sbjct: 72 DIFDQFGEEAFRTGEKKVIKRLMGEGQKILATGGGAFMNEDIRNDIAEGGVSVWLNADID 131
Query: 162 ALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
L +R+ RPLL + E +A A + EER YA A+ ++
Sbjct: 132 ILMKRVQR--RSDRPLL-KTEDPEATMRA------MLEERNPIYALADVQI 173
>gi|221639246|ref|YP_002525508.1| shikimate kinase [Rhodobacter sphaeroides KD131]
gi|221160027|gb|ACM01007.1| Shikimate kinase [Rhodobacter sphaeroides KD131]
Length = 181
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 92/170 (54%), Gaps = 16/170 (9%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + +VGMMG+GKT VG L+ L F D D IE++ + T +AEIF GE FFREKE
Sbjct: 7 KTVVMVGMMGAGKTAVGSALARGLNVPFLDSDEEIERAANRT-IAEIFARDGEPFFREKE 65
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
++VL +L V+STGGGA N R + ++G+SVWL L+ L R+ T RP
Sbjct: 66 SQVLARLLRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWLKADLDVLWHRVRHKAT--RP 123
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 221
LL + L L E R YA A+ V ++E +AV++
Sbjct: 124 LLRTPNPRET-------LRALLEARDPVYAQADLAVESGEGTVEQMAVRV 166
>gi|332558270|ref|ZP_08412592.1| shikimate kinase [Rhodobacter sphaeroides WS8N]
gi|332275982|gb|EGJ21297.1| shikimate kinase [Rhodobacter sphaeroides WS8N]
Length = 180
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 92/170 (54%), Gaps = 16/170 (9%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + +VGMMG+GKT VG L+ L F D D IE++ + T +AEIF GE FFREKE
Sbjct: 6 KTVVMVGMMGAGKTAVGSALARGLNVPFLDSDEEIERAANRT-IAEIFARDGEPFFREKE 64
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
++VL +L V+STGGGA N R + ++G+SVWL L+ L R+ T RP
Sbjct: 65 SQVLARLLRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWLKADLDVLWHRVRHKAT--RP 122
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 221
LL + L L E R YA A+ V ++E +AV++
Sbjct: 123 LLRTPNPRET-------LRALLEARDPVYAQADLAVESGEGTVEQMAVRV 165
>gi|119384027|ref|YP_915083.1| shikimate kinase [Paracoccus denitrificans PD1222]
gi|119373794|gb|ABL69387.1| shikimate kinase [Paracoccus denitrificans PD1222]
Length = 178
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I L+GMMG+GKT +G L+ L F D D IE++ ++ EIF GE FFR +E
Sbjct: 3 RNIVLIGMMGAGKTAIGGELARRLRRPFSDTDAEIERAA-AMTIPEIFARDGEEFFRARE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAAVGTDSRP 176
+EVL ++ VVSTGGGA RP N R + G+SVWLD LE L R+ T RP
Sbjct: 62 SEVLGRVLASGPGVVSTGGGAWLRPENRARIGEDGVSVWLDCDLETLWHRVRHRPT--RP 119
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
LL + L L +ER YA A+ RV +
Sbjct: 120 LLQ-------TPDPRGTLERLLDERSPVYALADIRVPAQR 152
>gi|336324067|ref|YP_004604034.1| shikimate kinase [Flexistipes sinusarabici DSM 4947]
gi|336107648|gb|AEI15466.1| Shikimate kinase [Flexistipes sinusarabici DSM 4947]
Length = 167
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 94/163 (57%), Gaps = 11/163 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ IYL+G MGSGKT+VGK L+ +F D D IE+S +G S+AEIF GE +FR+ E
Sbjct: 2 KNIYLLGFMGSGKTSVGKRLAEKKNMTFIDLDEKIEES-EGMSIAEIFAGKGEEYFRDVE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+VL++LS M +V+TGGGAV P N + M+ G++V L E + +R+ ++ RP
Sbjct: 61 KKVLKELSAMDSCIVATGGGAVMDPENLQTMKNSGVTVSLLASPEIVHERVK--NSNLRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 219
LL+ ++ + L ER Y ++ V +++V
Sbjct: 119 LLN-------VENPIDEIKKLMFERAAFYIKSDIIVDTSDLSV 154
>gi|126462247|ref|YP_001043361.1| shikimate kinase [Rhodobacter sphaeroides ATCC 17029]
gi|126103911|gb|ABN76589.1| shikimate kinase [Rhodobacter sphaeroides ATCC 17029]
Length = 193
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 92/170 (54%), Gaps = 16/170 (9%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + +VGMMG+GKT VG L+ L F D D IE++ + T +AEIF GE FFREKE
Sbjct: 19 KTVVMVGMMGAGKTAVGSALARGLNVPFLDSDEEIERAANRT-IAEIFARDGEPFFREKE 77
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
++VL +L V+STGGGA N R + ++G+SVWL L+ L R+ T RP
Sbjct: 78 SQVLARLLRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWLKADLDVLWHRVRHKAT--RP 135
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 221
LL + L L E R YA A+ V ++E +AV++
Sbjct: 136 LLRTPNPRET-------LRALLEARDPVYAQADLAVESGEGTVEQMAVRV 178
>gi|149182925|ref|ZP_01861383.1| shikimate kinase [Bacillus sp. SG-1]
gi|148849374|gb|EDL63566.1| shikimate kinase [Bacillus sp. SG-1]
Length = 172
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 86/150 (57%), Gaps = 13/150 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L+G MGSGKTT+G L+ L D D LIE+ + EIF +YGE FRE ETE
Sbjct: 2 IFLIGFMGSGKTTIGGALAQQLNCDCIDTDQLIEEKYQ-MKIREIFAVYGEKRFREMETE 60
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L +L+ +VV+TGGG R +N + M +KG +WL+ E L +RIA +RPL+
Sbjct: 61 ILHELN-DDGVVVTTGGGMAGREVNRQVMKEKGKVIWLNCRFEELVKRIAD--DAARPLV 117
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANA 208
Q + L+ L +L+EER Y A
Sbjct: 118 IQ--------KGLDGLKSLYEERHPLYEGA 139
>gi|421076082|ref|ZP_15537084.1| Shikimate kinase [Pelosinus fermentans JBW45]
gi|392525941|gb|EIW49065.1| Shikimate kinase [Pelosinus fermentans JBW45]
Length = 176
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 92/157 (58%), Gaps = 10/157 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I L+G MG+GKTTVG++L+ LG FFD D IE + S+ EIF++YGE +FR++E
Sbjct: 2 KNIVLIGFMGTGKTTVGRLLANRLGRPFFDSDKKIEYE-NNLSIREIFEVYGELYFRQQE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
++ KLS V++TGGG V N +++ G+ + L +E + +R + ++RP
Sbjct: 61 KMIIAKLSRYNNAVIATGGGVVLSLENMNNLKRNGVIITLTASVETILERTSR--RNTRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
LL D + + ++ L +ER E Y NA+ ++
Sbjct: 119 LL------DDFDQREKIVNKLLKERAELYYNADYSIN 149
>gi|114330403|ref|YP_746625.1| shikimate kinase [Nitrosomonas eutropha C91]
gi|114307417|gb|ABI58660.1| shikimate kinase [Nitrosomonas eutropha C91]
Length = 215
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 91/147 (61%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GMMG+GKTTVGK+L+ ++G +F D D I+Q G + IF++ GE FR++E+E
Sbjct: 31 IILIGMMGAGKTTVGKLLANLVGKTFIDVDHEIQQRT-GVGIPVIFEIEGEAGFRKRESE 89
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL+++ + +V++TGGGA+ P N + Q G ++L P+ L +R +RPLL
Sbjct: 90 VLREVVQQQNIVLATGGGAILYPDNRTLLRQHGTVIYLCAPVSELRRRTHQ--DKNRPLL 147
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
++G+A+ +L+ L+ +R Y
Sbjct: 148 ---QTGNAHA----KLAGLFTQRDPLY 167
>gi|423717808|ref|ZP_17691998.1| hypothetical protein MEG_01538 [Bartonella tamiae Th307]
gi|395427208|gb|EJF93324.1| hypothetical protein MEG_01538 [Bartonella tamiae Th307]
Length = 246
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 105/196 (53%), Gaps = 16/196 (8%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L+ + + LVG+MG+GKTTVGK ++ +L FFD D IE + T + E+F+ YGE FR
Sbjct: 62 LNNKSLVLVGLMGAGKTTVGKRVASMLRLPFFDADHEIENAAQMT-IPELFEAYGEAEFR 120
Query: 115 EKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
E V+ +L +V++TGGGA + +KGISVWLD L+ L +R++
Sbjct: 121 GLERRVILRLIQQGPMVLATGGGAYMNEETRMAINEKGISVWLDADLDLLMERVSR--RQ 178
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
+RPLL Q E+ A E L +ER YA A+ V + K G +DV + V
Sbjct: 179 NRPLL-QNENPRAVME------RLMQERYPIYARAHLTVK----SRKAG-RDVVARNVVR 226
Query: 234 IAIEALEQIEGFLKEE 249
I L + E ++E
Sbjct: 227 IVERHLNKQEKLQQKE 242
>gi|257454915|ref|ZP_05620163.1| shikimate kinase [Enhydrobacter aerosaccus SK60]
gi|257447625|gb|EEV22620.1| shikimate kinase [Enhydrobacter aerosaccus SK60]
Length = 178
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 87/141 (61%), Gaps = 3/141 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MG+GKTT+GK+L+ LG++F+D D IE+ V G S++ IF+ GE FR++ET
Sbjct: 10 IILIGPMGAGKTTIGKLLAQQLGFTFYDSDQEIER-VSGASISWIFEKEGEVGFRQRETR 68
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
VL KL+ + +V++TGGGAVT N ++++GI ++L ++ +R +RPLL
Sbjct: 69 VLDKLTHLDHVVLATGGGAVTIAENHHFLKRGIIIYLRAEVDIQYERTCR--DRNRPLLQ 126
Query: 180 QCESGDAYTEALNRLSTLWEE 200
TE + ++++
Sbjct: 127 IDNPKQKLTELFCKRDPIYQQ 147
>gi|407768620|ref|ZP_11115998.1| shikimate kinase [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407288304|gb|EKF13782.1| shikimate kinase [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 200
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 89/160 (55%), Gaps = 11/160 (6%)
Query: 51 IEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGE 110
I L GR + +G+MG+GK+ +G++++ L F D D IE++ G S+A+IFKLYGE
Sbjct: 18 IRTGLKGRPLVFIGLMGAGKSCIGRMVAKALDLDFVDADREIEEAA-GCSIADIFKLYGE 76
Query: 111 GFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAA 169
FRE E V+ +L LV++TGGGA R ++K +SVWL L+ L QR +
Sbjct: 77 EAFREGEERVIARLLDGEPLVLATGGGAFIREKTRELILEKSVSVWLRADLDLLLQRTS- 135
Query: 170 VGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
G RPLL+ +GD L L E R YA A+
Sbjct: 136 -GRTHRPLLN---NGDPR----QILGDLIEARYPVYAGAD 167
>gi|395785293|ref|ZP_10465025.1| hypothetical protein ME5_00343 [Bartonella tamiae Th239]
gi|395424840|gb|EJF91011.1| hypothetical protein ME5_00343 [Bartonella tamiae Th239]
Length = 250
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 105/196 (53%), Gaps = 16/196 (8%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L+ + + LVG+MG+GKTTVGK ++ +L FFD D IE + T + E+F+ YGE FR
Sbjct: 66 LNNKSLVLVGLMGAGKTTVGKRVASMLRLPFFDADHEIENAAQMT-IPELFEAYGEAEFR 124
Query: 115 EKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
E V+ +L +V++TGGGA + +KGISVWLD L+ L +R++
Sbjct: 125 GLERRVILRLIQQGPMVLATGGGAYMNEETRMAINEKGISVWLDADLDLLMERVSR--RQ 182
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
+RPLL Q E+ A E L +ER YA A+ V + K G +DV + V
Sbjct: 183 NRPLL-QNENPRAVME------RLMQERYPIYARAHLTVK----SRKAG-RDVVARNVVR 230
Query: 234 IAIEALEQIEGFLKEE 249
I L + E ++E
Sbjct: 231 IVERHLNKQEKLQQKE 246
>gi|255262136|ref|ZP_05341478.1| shikimate kinase [Thalassiobium sp. R2A62]
gi|255104471|gb|EET47145.1| shikimate kinase [Thalassiobium sp. R2A62]
Length = 182
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + LVGMMGSGKT VG+ LS L F D D IE++ S+AEIF GE FFR++E
Sbjct: 7 KTVVLVGMMGSGKTAVGRALSARLNVPFRDSDAEIEEAAQ-RSIAEIFSRDGEPFFRDRE 65
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
EV+++L V+STGGGA N + ++GISV LD L L R+ + D+RP
Sbjct: 66 AEVIERLLTDVPSVLSTGGGAFLAERNRTAITERGISVLLDADLNLLWDRVKS--KDTRP 123
Query: 177 LLHQCESGDAYTEALNRLSTLW 198
LL T+ N S+++
Sbjct: 124 LLRTSNPRATLTQIFNDRSSIY 145
>gi|154252170|ref|YP_001412994.1| shikimate kinase [Parvibaculum lavamentivorans DS-1]
gi|154156120|gb|ABS63337.1| Shikimate kinase [Parvibaculum lavamentivorans DS-1]
Length = 208
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 87/156 (55%), Gaps = 11/156 (7%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L+ R I LVG+MG+GKTTVG+ L+ L +F D D IEQ+ G ++ EIF+ +GE FR
Sbjct: 24 LAERSIVLVGLMGAGKTTVGRRLARRLDLAFVDADAEIEQAA-GETIPEIFERHGEPAFR 82
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAAVGTD 173
E V+ +L V++TGGGA P+ +GIS+WL L+ L +R+ G
Sbjct: 83 AGERRVIARLLGAAPQVLATGGGAFMDPVTRANVAARGISIWLKADLDVLVKRVGKRG-- 140
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
RPLL ++GD + L +ER YA A+
Sbjct: 141 DRPLL---QTGDTRAT----MKRLMDERYPVYAEAD 169
>gi|402298894|ref|ZP_10818544.1| shikimate kinase [Bacillus alcalophilus ATCC 27647]
gi|401725901|gb|EJS99162.1| shikimate kinase [Bacillus alcalophilus ATCC 27647]
Length = 168
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 85/152 (55%), Gaps = 13/152 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R +YL G MGSGKTTVG+ L LG D D IEQ ++ ++ E+F+ GE +FREKE
Sbjct: 3 RIVYLTGFMGSGKTTVGEGLGKALGVQVIDTDQWIEQ-IENETIKELFQTKGERYFREKE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
TE L K+ L+V+TGGG V + N M+ KG V+LD ++ + R+A G +RP
Sbjct: 62 TEALVKIQ-QYPLIVTTGGGIVLKEENRELMRNKGAVVFLDCKIDEIFDRVA--GDSTRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
LL + + ++++R AY A
Sbjct: 119 LLQNKSKAE--------IKKMYDDRKTAYLEA 142
>gi|395767610|ref|ZP_10448143.1| shikimate kinase [Bartonella doshiae NCTC 12862]
gi|395413973|gb|EJF80426.1| shikimate kinase [Bartonella doshiae NCTC 12862]
Length = 205
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 27/198 (13%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + LVG+MG+GK+ +GK ++ +L F+D D IE++ T + E+FK YGE FR
Sbjct: 22 LDKRALVLVGLMGAGKSVIGKRVATMLHLPFYDSDQEIEKAAQMT-ITELFKTYGESEFR 80
Query: 115 EKETEVLQKLSLMRQ--LVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVG 171
E V+ L+LM++ LV++TGGGA + I Q GIS+WL V L L +R++
Sbjct: 81 ALEQRVI--LNLMKKSPLVLATGGGAYINENIQKAIHQNGISIWLKVDLNILMKRVSRRP 138
Query: 172 TDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTP 231
T RPLL Q E+ E + R L ++R YA A+ + HK+
Sbjct: 139 T--RPLL-QTENPQ---ETMQR---LMDQRHPIYAKADLTIK--------SHKESRH--- 178
Query: 232 VTIAIEALEQIEGFLKEE 249
T+A + I+ +L +E
Sbjct: 179 -TVAQNVIRSIQHYLYKE 195
>gi|374993695|ref|YP_004969194.1| shikimate kinase [Desulfosporosinus orientis DSM 765]
gi|357212061|gb|AET66679.1| shikimate kinase [Desulfosporosinus orientis DSM 765]
Length = 177
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 87/153 (56%), Gaps = 13/153 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I L+G MG+GK+TVGK L+ L + F D D I D SV+EIF+ YGE FR +E
Sbjct: 2 RNIVLIGFMGTGKSTVGKRLAQSLAWDFVDTDYEIGAVTD-LSVSEIFRRYGETRFRSEE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
+ V+ ++S +LV++TGGG P NW + + G+ + L L+A+ RI + RP
Sbjct: 61 SIVVDRISRQERLVIATGGGTALNPANWSALAENGVIIALHATLDAILARIGH--KNDRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LL + EA+ + LW ER + YA A+
Sbjct: 119 LLKGPK------EAIEK---LWIERQKCYAQAD 142
>gi|392960627|ref|ZP_10326094.1| Shikimate kinase [Pelosinus fermentans DSM 17108]
gi|421054615|ref|ZP_15517581.1| shikimate kinase [Pelosinus fermentans B4]
gi|421058832|ref|ZP_15521481.1| Shikimate kinase [Pelosinus fermentans B3]
gi|421067652|ref|ZP_15529107.1| Shikimate kinase [Pelosinus fermentans A12]
gi|421071478|ref|ZP_15532595.1| Shikimate kinase [Pelosinus fermentans A11]
gi|392440604|gb|EIW18277.1| shikimate kinase [Pelosinus fermentans B4]
gi|392446997|gb|EIW24263.1| Shikimate kinase [Pelosinus fermentans A11]
gi|392448830|gb|EIW26006.1| Shikimate kinase [Pelosinus fermentans A12]
gi|392454871|gb|EIW31685.1| Shikimate kinase [Pelosinus fermentans DSM 17108]
gi|392460024|gb|EIW36375.1| Shikimate kinase [Pelosinus fermentans B3]
Length = 176
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 92/157 (58%), Gaps = 10/157 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I L+G MG+GKTTVG++L+ LG FFD D IE + S+ EIF++YGE +FR++E
Sbjct: 2 KNIVLIGFMGTGKTTVGRLLANRLGRPFFDSDKKIEYE-NNLSIREIFEVYGELYFRQQE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
++ KLS V++TGGG V N +++ G+ + L +E + +R + ++RP
Sbjct: 61 KMIIAKLSRYNNAVIATGGGVVLSFENMNNLKRNGVIITLTASVETILERTSR--RNTRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
LL D + + ++ L +ER E Y NA+ ++
Sbjct: 119 LL------DDFDQREKIVNKLLKERAELYYNADYSIN 149
>gi|349699505|ref|ZP_08901134.1| shikimate kinase / 3-dehydroquinate synthase [Gluconacetobacter
europaeus LMG 18494]
Length = 577
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 89/158 (56%), Gaps = 17/158 (10%)
Query: 56 SGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFRE 115
SGR I LVG+MG+GKTT+G+IL+ LG F D D IE++ G ++A++F+ YGE FR
Sbjct: 36 SGRTIVLVGLMGAGKTTIGRILAARLGVPFVDSDEEIERAA-GYTIADLFQKYGEPEFRR 94
Query: 116 KETEVLQKLSLMRQLVVSTGGGAVTRPINWR----YMQKGISVWLDVPLEALAQRIAAVG 171
E V+++L +V++TGGGA ++ R + IS+WL PL L QR+A
Sbjct: 95 GERLVIRRLLSGPPVVLATGGGAF---MDSRTRAGVREHAISIWLRCPLPVLVQRVA--D 149
Query: 172 TDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
RPLL+ T L+ L + R YA A+
Sbjct: 150 RTHRPLLNA-------TSPHAVLANLMQLRHPVYAEAD 180
>gi|407007632|gb|EKE23237.1| hypothetical protein ACD_6C00554G0003 [uncultured bacterium]
Length = 178
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR++ET
Sbjct: 12 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEQGFRDRETA 70
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ L+ LV++TGGGA+T+ +N Y+ Q+GI V+L P+E QR +RPLL
Sbjct: 71 VINDLTSRPHLVLATGGGAITQALNRDYLKQRGIVVYLYTPVEIQLQR--TYRDKNRPLL 128
Query: 179 H 179
Sbjct: 129 Q 129
>gi|188580843|ref|YP_001924288.1| shikimate kinase, 3-dehydroquinate synthase [Methylobacterium
populi BJ001]
gi|179344341|gb|ACB79753.1| Shikimate kinase, 3-dehydroquinate synthase [Methylobacterium
populi BJ001]
Length = 579
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I LVG+MG+GK+TVG+ L+ LG F D D IE + T +A+IF +YGE FR
Sbjct: 23 LGARSIVLVGLMGAGKSTVGRRLASRLGLMFKDADHEIEAAAKLT-IADIFAIYGEASFR 81
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
E E V+ +L +V++TGGGA R R GISVWL L+ L +R+ +
Sbjct: 82 EGEERVIARLLREGPMVLATGGGAFMREATRARIADGGISVWLKADLDVLMRRVRK--RN 139
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
+RPLL Q E +A A L E R YA A+ V
Sbjct: 140 TRPLL-QTEDPEATMRA------LMEVRHPVYAQADVTV 171
>gi|424886619|ref|ZP_18310227.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393175970|gb|EJC76012.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 196
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 83/139 (59%), Gaps = 7/139 (5%)
Query: 41 AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTS 100
A LK++++ L R + LVG+MG+GK+ VG+I++ LG F D D IE+ V +
Sbjct: 9 ADSLKDRAR---AALGSRNLILVGLMGAGKSAVGRIVASQLGIPFIDSDHEIER-VSRMT 64
Query: 101 VAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVP 159
+AE+F YGE FR ET V+++L VVSTGGGA R++ K G+SVWL
Sbjct: 65 IAELFAAYGEDEFRALETRVMKRLLKSGPRVVSTGGGAFINERTRRHISKGGVSVWLKAD 124
Query: 160 LEALAQRIAAVGTDSRPLL 178
LE L +R+ D+RPLL
Sbjct: 125 LEVLWERVNK--RDTRPLL 141
>gi|148263876|ref|YP_001230582.1| shikimate kinase [Geobacter uraniireducens Rf4]
gi|146397376|gb|ABQ26009.1| shikimate kinase [Geobacter uraniireducens Rf4]
Length = 169
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 90/157 (57%), Gaps = 11/157 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ ++L G MG+GK++VGKIL+ LG F D D LI G S+ EIF +GE +FR E
Sbjct: 2 KNVFLTGFMGTGKSSVGKILAERLGCQFIDLDALIVAEA-GMSIKEIFAAHGEPYFRALE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+++++L + VVSTGGG V P N R M++ G+ V L + A+ +R+AA + RP
Sbjct: 61 ADLVRRLISEKGAVVSTGGGVVIDPENRRLMRENGVVVNLTATVHAIRERLAA--DNERP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
LL S L ++ ++ ER Y +A+ R+
Sbjct: 119 LLQDDNS-------LEKIVSMLAEREPFYRDADIRID 148
>gi|390941822|ref|YP_006405583.1| shikimate kinase [Belliella baltica DSM 15883]
gi|390415250|gb|AFL82828.1| shikimate kinase [Belliella baltica DSM 15883]
Length = 176
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM GSGK+T G++++ L + F D D LIE+ +G + +IF+ GEG FRE ET
Sbjct: 7 IVLIGMPGSGKSTFGRMVARELNFVFIDLDHLIEKG-EGRLIKDIFEEEGEGKFREMETY 65
Query: 120 VL-QKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPL 177
L Q L + V+STGGG N + +KGISV+LDVPLE L +R+ RPL
Sbjct: 66 YLNQALDNVEGFVLSTGGGTPCFNDNMDLINEKGISVFLDVPLEELQKRLTKDSASQRPL 125
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKL 221
+G E +L + RG Y A ++S E+ + +L
Sbjct: 126 FFGMNTG----EITLKLKDMMAIRGSYYDQAKIKLSGEDPSTEL 165
>gi|159044158|ref|YP_001532952.1| shikimate kinase [Dinoroseobacter shibae DFL 12]
gi|157911918|gb|ABV93351.1| shikimate kinase [Dinoroseobacter shibae DFL 12]
Length = 185
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 74/120 (61%), Gaps = 4/120 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ LVGMMG+GKT VG ++ LG F D D IEQ+ + +AEIF+ GE FFR++ETE
Sbjct: 13 VVLVGMMGAGKTAVGGAVAAQLGVPFIDSDHEIEQAANA-KIAEIFERDGEAFFRDRETE 71
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL +L ++STGGGA N + +KG+SVWLD LE L R+ T RPLL
Sbjct: 72 VLARLLGGVPAILSTGGGAFLAERNRALIAEKGVSVWLDAELELLWSRVRHKST--RPLL 129
>gi|404495838|ref|YP_006719944.1| shikimate kinase [Geobacter metallireducens GS-15]
gi|418067761|ref|ZP_12705095.1| Shikimate kinase [Geobacter metallireducens RCH3]
gi|373558265|gb|EHP84617.1| Shikimate kinase [Geobacter metallireducens RCH3]
gi|403378002|gb|ABB31219.2| shikimate kinase [Geobacter metallireducens GS-15]
Length = 179
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 93/158 (58%), Gaps = 11/158 (6%)
Query: 56 SGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFRE 115
S R + L G MG+GK++VG++L+ LG+ + D D LI + +G S+ EIF +GE FR
Sbjct: 11 SVRNVILTGFMGTGKSSVGRLLAHRLGFRYCDLDALIVEG-EGVSINEIFARHGEPHFRA 69
Query: 116 KETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDS 174
ETE ++ +S + VVSTGGGAV P N ++K G+ V L +E + +R+ TD
Sbjct: 70 LETEAVRSVSREERCVVSTGGGAVISPENRCLLRKAGVVVNLTATVEEVCRRLRE-ETD- 127
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
RPLL SG+ R++ + ER + YA+A R+
Sbjct: 128 RPLLKDDRSGE-------RIAAMMAEREQFYADAELRI 158
>gi|209965948|ref|YP_002298863.1| shikimate kinase [Rhodospirillum centenum SW]
gi|209959414|gb|ACJ00051.1| shikimate kinase [Rhodospirillum centenum SW]
Length = 198
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 54 YLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFF 113
++ R + LVG+MG+GKT++GK L+ L F D D IE S G ++ EIF +GE F
Sbjct: 7 FVPPRTLVLVGLMGAGKTSIGKRLAAKLHLPFVDADHEIE-SAAGCTIQEIFDRFGEAQF 65
Query: 114 REKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGT 172
R+ E V+ +L + V+STGGGA P + ++G+SVWL PL+ L R
Sbjct: 66 RDGERRVIARLLEGQVRVLSTGGGAFMHPETRALIRERGLSVWLRAPLDLLVARTGR--R 123
Query: 173 DSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
D+RPLL Q D L+ L +R YA A+
Sbjct: 124 DNRPLLKQGNPRDI-------LAALMAQRYPVYAEAD 153
>gi|262377050|ref|ZP_06070276.1| shikimate kinase [Acinetobacter lwoffii SH145]
gi|262308088|gb|EEY89225.1| shikimate kinase [Acinetobacter lwoffii SH145]
Length = 188
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR++ET
Sbjct: 22 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEQGFRDRETA 80
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ L+ LV++TGGGA+T+ +N Y+ Q+GI V+L P+E QR +RPLL
Sbjct: 81 VINDLTSRPHLVLATGGGAITQTLNRDYLKQRGIVVYLYTPVEIQLQR--TYRDKNRPLL 138
Query: 179 H 179
Sbjct: 139 Q 139
>gi|347754071|ref|YP_004861635.1| shikimate kinase [Candidatus Chloracidobacterium thermophilum B]
gi|347586589|gb|AEP11119.1| Shikimate kinase [Candidatus Chloracidobacterium thermophilum B]
Length = 199
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 99/193 (51%), Gaps = 32/193 (16%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVG MGSGKTTVG+ L+ LG F D D I ++ G S+ E+F+ GE FR++E
Sbjct: 14 IFLVGFMGSGKTTVGQHLAARLGGRFIDLDERIARAA-GRSIPELFQTEGETGFRQREHA 72
Query: 120 VL-QKLSLMRQ-----LVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGT 172
L Q + +RQ +V+ GGG TRP N ++ Q G SVWLDVP + LA R+ G
Sbjct: 73 ALVQVCAELRQDDLPWNIVALGGGTFTRPENRNHIRQTGCSVWLDVPFDILATRVVPDG- 131
Query: 173 DSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPV 232
RPL + EA R +E+R YA A+ RV V + P
Sbjct: 132 -RRPLWTSVD------EARLR----YEQRRADYAQADIRVP------------VGTAPPE 168
Query: 233 TIAIEALEQIEGF 245
+A + L+ + F
Sbjct: 169 QVAEDVLQALSAF 181
>gi|326387721|ref|ZP_08209327.1| shikimate kinase [Novosphingobium nitrogenifigens DSM 19370]
gi|326207767|gb|EGD58578.1| shikimate kinase [Novosphingobium nitrogenifigens DSM 19370]
Length = 189
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 90/159 (56%), Gaps = 13/159 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R + LVGMMG GKTTVG+ L+ +LG F D D IE++ T + EIF YGE +FR+ E
Sbjct: 20 RPLVLVGMMGVGKTTVGRKLASLLGVPFIDADEEIERAAHMT-IPEIFAQYGEPYFRDGE 78
Query: 118 TEVLQKL--SLMRQLVVSTGGGAVTRPINWR-YMQKGISVWLDVPLEALAQRIAAVGTDS 174
V+ +L + + V++TGGGA P R +++ I+VW+D +E L +R+ D+
Sbjct: 79 RRVIARLVDVVTGRKVLATGGGAFVDPETRRIILERAIAVWIDSDVETLVERVGR--KDN 136
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
RPLL +G+ + E L RL ER Y A V
Sbjct: 137 RPLL---RNGNPH-EILTRLRI---ERQPHYCQAPIHVH 168
>gi|389704106|ref|ZP_10185820.1| shikimate kinase [Acinetobacter sp. HA]
gi|388611189|gb|EIM40295.1| shikimate kinase [Acinetobacter sp. HA]
Length = 178
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET
Sbjct: 12 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEQGFRSRETV 70
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ +L+ QLV++TGGGAVT+ N Y+ Q+GI V+L P+E QR +RPLL
Sbjct: 71 VIDELTSRPQLVLATGGGAVTQAPNREYLKQRGIVVYLYTPVEIQLQR--TYRDKNRPLL 128
Query: 179 H 179
Sbjct: 129 Q 129
>gi|410657061|ref|YP_006909432.1| Shikimate kinase I [Dehalobacter sp. DCA]
gi|410660098|ref|YP_006912469.1| Shikimate kinase I [Dehalobacter sp. CF]
gi|409019416|gb|AFV01447.1| Shikimate kinase I [Dehalobacter sp. DCA]
gi|409022454|gb|AFV04484.1| Shikimate kinase I [Dehalobacter sp. CF]
Length = 179
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 94/186 (50%), Gaps = 24/186 (12%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G M +GK++VGK+L+ L + F D D+ IE+ + G + EIF+ YGE FR +E
Sbjct: 12 IVLIGFMAAGKSSVGKLLARELRWGFMDTDSEIER-MTGLKIPEIFQKYGEARFRSEENL 70
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ K+S V++TGGG V P NW + G V+L VPLE QR A RPLL
Sbjct: 71 LVHKISGFTDTVIATGGGTVLDPENWNILHGLGKLVYLYVPLEIALQR--AKEHHDRPLL 128
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
E ++ LW +R Y A I V KDV T+A E
Sbjct: 129 SSSEP--------EQIEKLWRDREVIYRKA-------PITVDTSDKDVQ-----TVAAEI 168
Query: 239 LEQIEG 244
LE ++G
Sbjct: 169 LELLKG 174
>gi|255034035|ref|YP_003084656.1| shikimate kinase [Dyadobacter fermentans DSM 18053]
gi|254946791|gb|ACT91491.1| Shikimate kinase [Dyadobacter fermentans DSM 18053]
Length = 167
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 76/122 (62%), Gaps = 2/122 (1%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I LVGMM SGKTT+GK L+ L Y F D D LIE+ G ++ IF GE +FRE E
Sbjct: 2 KNIILVGMMSSGKTTLGKKLARALNYQFVDLDKLIEKD-QGMEISSIFAQRGEAYFREVE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+ +L++ + + +V+++GGG N ++ GIS++LDVP LA+RI G D RP
Sbjct: 61 SRILKETASQKGIVLASGGGTPCFFDNMEVIKAMGISIFLDVPAGDLARRIENHGKDDRP 120
Query: 177 LL 178
+L
Sbjct: 121 IL 122
>gi|218462163|ref|ZP_03502254.1| shikimate kinase [Rhizobium etli Kim 5]
Length = 196
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 84/139 (60%), Gaps = 7/139 (5%)
Query: 41 AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTS 100
A LK++++ L R + LVG+MG+GK+ VG+I++ LG F D D IE+ V +
Sbjct: 9 ADSLKDRAR---AALGSRNLILVGLMGAGKSAVGRIVASQLGIPFIDSDHEIER-VSRMT 64
Query: 101 VAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVP 159
+AE+F YGE FR ET V+++L VVSTGGGA R++++ G+SVWL
Sbjct: 65 IAELFAAYGEDEFRALETRVMKRLLKSGPRVVSTGGGAFVNERTRRHIKRGGLSVWLKAD 124
Query: 160 LEALAQRIAAVGTDSRPLL 178
LE L +R+ D+RPLL
Sbjct: 125 LEVLWERVNK--RDTRPLL 141
>gi|296113650|ref|YP_003627588.1| shikimate kinase [Moraxella catarrhalis RH4]
gi|416157421|ref|ZP_11605164.1| shikimate kinase [Moraxella catarrhalis 101P30B1]
gi|416218596|ref|ZP_11625010.1| shikimate kinase [Moraxella catarrhalis 7169]
gi|416224551|ref|ZP_11626575.1| shikimate kinase [Moraxella catarrhalis 103P14B1]
gi|416231073|ref|ZP_11628655.1| shikimate kinase [Moraxella catarrhalis 46P47B1]
gi|416233261|ref|ZP_11629235.1| shikimate kinase [Moraxella catarrhalis 12P80B1]
gi|416238873|ref|ZP_11631556.1| shikimate kinase [Moraxella catarrhalis BC1]
gi|416243735|ref|ZP_11634070.1| shikimate kinase [Moraxella catarrhalis BC7]
gi|416248005|ref|ZP_11636097.1| shikimate kinase [Moraxella catarrhalis BC8]
gi|416252252|ref|ZP_11638087.1| shikimate kinase [Moraxella catarrhalis CO72]
gi|416255883|ref|ZP_11639452.1| shikimate kinase [Moraxella catarrhalis O35E]
gi|421780454|ref|ZP_16216943.1| shikimate kinase [Moraxella catarrhalis RH4]
gi|295921344|gb|ADG61695.1| shikimate kinase [Moraxella catarrhalis BBH18]
gi|326559644|gb|EGE10058.1| shikimate kinase [Moraxella catarrhalis 7169]
gi|326560016|gb|EGE10411.1| shikimate kinase [Moraxella catarrhalis 46P47B1]
gi|326562498|gb|EGE12815.1| shikimate kinase [Moraxella catarrhalis 103P14B1]
gi|326566934|gb|EGE17072.1| shikimate kinase [Moraxella catarrhalis 12P80B1]
gi|326567678|gb|EGE17784.1| shikimate kinase [Moraxella catarrhalis BC1]
gi|326568687|gb|EGE18758.1| shikimate kinase [Moraxella catarrhalis BC7]
gi|326568864|gb|EGE18934.1| shikimate kinase [Moraxella catarrhalis BC8]
gi|326572678|gb|EGE22667.1| shikimate kinase [Moraxella catarrhalis CO72]
gi|326574277|gb|EGE24225.1| shikimate kinase [Moraxella catarrhalis 101P30B1]
gi|326575063|gb|EGE24992.1| shikimate kinase [Moraxella catarrhalis O35E]
gi|407812610|gb|EKF83395.1| shikimate kinase [Moraxella catarrhalis RH4]
Length = 211
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 85/134 (63%), Gaps = 6/134 (4%)
Query: 59 CIYLVGMMGSGKTTVGKILSGVLGYSFFDCD-TLIEQSVDGTSVAEIFKLYGEGFFREKE 117
I+LVG MG+GKTT+GK+L+ LG +F DCD +++Q+ G + IF+ GE FR++E
Sbjct: 27 AIFLVGPMGAGKTTIGKLLAKHLGRNFIDCDWYIVDQT--GADIPWIFEKEGEEGFRDRE 84
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPL 177
T LQ+L+ + ++++TGGGAV R N ++KG+ ++LD ++ R +RPL
Sbjct: 85 TRALQELTALPNIIMATGGGAVGRTKNRELLKKGLVIYLDASVDTQLARTKK--DKNRPL 142
Query: 178 LHQCESGDAYTEAL 191
L Q ++ A E+L
Sbjct: 143 L-QAQNPRAVLESL 155
>gi|85708391|ref|ZP_01039457.1| shikimate kinase [Erythrobacter sp. NAP1]
gi|85689925|gb|EAQ29928.1| shikimate kinase [Erythrobacter sp. NAP1]
Length = 188
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 93/171 (54%), Gaps = 15/171 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I LVG+MG+GK+TVG+ LS +L F D D IE++ S+ EIF +GE +FR+ E
Sbjct: 21 KPIVLVGLMGAGKSTVGRRLSSLLRRDFVDADDAIEEAAQ-RSIPEIFDEFGEAYFRDGE 79
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRP 176
V+ +L + V++TGGGA P +++ I+VW+D ++ L +R + T RP
Sbjct: 80 RRVIARLIEEKHGVIATGGGAFVDPETRALILKQAIAVWIDCDIDTLVERTSRRNT--RP 137
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVS 227
LL Q GD LS L+ +R Y A RV E+ HKD +
Sbjct: 138 LLRQ---GDPK----QILSDLFSKREPFYKQAQVRVLSEDGP----HKDTA 177
>gi|395211601|ref|ZP_10399407.1| shikimate kinase [Pontibacter sp. BAB1700]
gi|394457675|gb|EJF11796.1| shikimate kinase [Pontibacter sp. BAB1700]
Length = 171
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 79/128 (61%), Gaps = 3/128 (2%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+S + I+L+GMMG+GKTT+G+ L+ LGY+F D D +EQ +G S+A++F G FR
Sbjct: 1 MSTQRIFLIGMMGAGKTTLGRQLAERLGYTFVDLDEYLEQR-EGCSIAQLFAAGGHEGFR 59
Query: 115 EKETEVLQK-LSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGT 172
+KE + ++ + Q VV+TGGG N ++ Q G S++LDVP E L QR+
Sbjct: 60 QKERQAMESVVQEFEQAVVATGGGTPCFFDNMAFINQHGTSIFLDVPSEELTQRLLLTNL 119
Query: 173 DSRPLLHQ 180
RPLL Q
Sbjct: 120 SQRPLLAQ 127
>gi|50086333|ref|YP_047843.1| shikimate kinase [Acinetobacter sp. ADP1]
gi|60389578|sp|Q6F7E4.1|AROK_ACIAD RecName: Full=Shikimate kinase; Short=SK
gi|49532309|emb|CAG70021.1| shikimate-kinase [Acinetobacter sp. ADP1]
Length = 180
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 87/149 (58%), Gaps = 11/149 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET
Sbjct: 12 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERRT-GATIPWIFEKEGEIGFRSRETI 70
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL L+ R LV++TGGG VT+P N Y++ +G+ V+L P+E QR +RPLL
Sbjct: 71 VLDDLTSRRDLVLATGGGVVTQPANRSYLKTRGVVVYLYTPVELQLQR--TYRDKNRPLL 128
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYAN 207
Q E+ + RL L + R Y +
Sbjct: 129 -QVENPE------QRLRDLLKLRDPLYRD 150
>gi|225024351|ref|ZP_03713543.1| hypothetical protein EIKCOROL_01226 [Eikenella corrodens ATCC
23834]
gi|224942848|gb|EEG24057.1| hypothetical protein EIKCOROL_01226 [Eikenella corrodens ATCC
23834]
Length = 184
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 84/147 (57%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+ +G+MG+GKTT GK L+ +L F D D LI Q G S+A IF+L GEG FR++E
Sbjct: 11 IFFIGLMGAGKTTHGKQLAALLQRDFIDSDQLICQRT-GVSIATIFELEGEGGFRKREAA 69
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ +L+ ++++TGGGAV P N + +G ++L E L +RI +RPLL
Sbjct: 70 IIDELTRRHPIILATGGGAVLSPDNCHCLHTRGTVIYLHATPEILYRRIQY--DKNRPLL 127
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
L++L TL+++R Y
Sbjct: 128 Q-------VANPLDKLQTLYQQRDPLY 147
>gi|404253800|ref|ZP_10957768.1| shikimate kinase [Sphingomonas sp. PAMC 26621]
Length = 187
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 11/163 (6%)
Query: 52 EPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEG 111
+P G+ I LVG+MG+GK+TVG+ L+ LG F D D+ IE + G S+ +IF+ +GE
Sbjct: 15 QPRWGGQTIVLVGLMGAGKSTVGRRLAIRLGLPFVDADSEIETAA-GMSIPDIFERFGEA 73
Query: 112 FFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAV 170
+FR+ E V+ +L + V++TGGGA V + +G +VWLD LA R++
Sbjct: 74 YFRDGERRVIARLMNGDRRVIATGGGAFVDDRTRETILAQGFAVWLDAKPSVLADRVSR- 132
Query: 171 GTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
D+RPLL + L L L R YA A RVS
Sbjct: 133 -RDTRPLLRG-------RDPLAVLEELARVRNPFYAMAPLRVS 167
>gi|397690465|ref|YP_006527719.1| shikimate kinase [Melioribacter roseus P3M]
gi|395811957|gb|AFN74706.1| shikimate kinase [Melioribacter roseus P3M]
Length = 182
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 96/167 (57%), Gaps = 9/167 (5%)
Query: 59 CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKET 118
IYL G M SGK+TVG IL+ VLG F+D D I + +G S+ +IF+ GE +FR+ ET
Sbjct: 2 IIYLTGFMTSGKSTVGPILANVLGLDFYDLDEEIVKR-EGMSIVDIFEQKGESYFRKVET 60
Query: 119 EVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPL 177
+L+++S +++S GGG +T N ++M++ G V+L V E L +R+ TD RPL
Sbjct: 61 RLLKEISNNDDVIISLGGGTITIDENLKFMKENGFIVYLKVDNETLYRRLKN-KTD-RPL 118
Query: 178 LHQC---ESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKL 221
E+G E + R++ L ++R Y A+ + ++ V L
Sbjct: 119 FKDLVMNENGKE--EFIKRINNLLDKRSRYYEQADLTIECDSRPVGL 163
>gi|406036782|ref|ZP_11044146.1| shikimate kinase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 186
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET
Sbjct: 18 IYLVGPMGAGKTTVGRHLAELLGRDFLDSDHEIERKT-GATIPWIFEKEGEAGFRLRETN 76
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL +L+ LV++TGGGAVT+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 77 VLNELTTRSALVLATGGGAVTQSANREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL 134
Query: 179 HQCESGDAYTEALNRLSTLWEE 200
E L L+ E
Sbjct: 135 QVENPEQKLRELLTARDPLYRE 156
>gi|115312149|sp|Q39X05.1|AROK_GEOMG RecName: Full=Shikimate kinase; Short=SK
Length = 168
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 92/156 (58%), Gaps = 11/156 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R + L G MG+GK++VG++L+ LG+ + D D LI + +G S+ EIF +GE FR E
Sbjct: 2 RNVILTGFMGTGKSSVGRLLAHRLGFRYCDLDALIVEG-EGVSINEIFARHGEPHFRALE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
TE ++ +S + VVSTGGGAV P N ++K G+ V L +E + +R+ TD RP
Sbjct: 61 TEAVRSVSREERCVVSTGGGAVISPENRCLLRKAGVVVNLTATVEEVCRRLRE-ETD-RP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
LL SG+ R++ + ER + YA+A R+
Sbjct: 119 LLKDDRSGE-------RIAAMMAEREQFYADAELRI 147
>gi|393769157|ref|ZP_10357685.1| shikimate kinase [Methylobacterium sp. GXF4]
gi|392725398|gb|EIZ82735.1| shikimate kinase [Methylobacterium sp. GXF4]
Length = 203
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 87/152 (57%), Gaps = 13/152 (8%)
Query: 29 LESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDC 88
+ G+V PI EA++ + L R I LVG+MG+GK+TVG+ L+ LG F D
Sbjct: 5 MNEGDVGEPI-EARLRR--------ALGLRSIVLVGLMGAGKSTVGRRLASRLGLIFKDA 55
Query: 89 DTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRY 147
D+ IE + G ++ +IF +YGE FR+ E V+ +L LV++TGGGA R R
Sbjct: 56 DSEIEAAA-GLTIPDIFAIYGEPSFRDGEERVISRLLRAGPLVLATGGGAYLREATRARI 114
Query: 148 MQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
+ ISVWL L+ L +R+ G +RPLLH
Sbjct: 115 RESAISVWLKADLDVLMRRVRKRG--NRPLLH 144
>gi|292670452|ref|ZP_06603878.1| shikimate kinase [Selenomonas noxia ATCC 43541]
gi|292647862|gb|EFF65834.1| shikimate kinase [Selenomonas noxia ATCC 43541]
Length = 173
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G MG+GKT++G++L+ LG +F D D IE+ G S+ +F +GE +FR +E E
Sbjct: 4 VVLIGFMGTGKTSIGRLLAARLGCAFHDLDRKIEEQ-HGMSIPAMFAQHGEPYFRAREKE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+ + V++TGGG V P N ++K GI V L ++ + QR AA G RP+L
Sbjct: 63 AVHAAASRSNAVIATGGGTVKDPENTAALRKNGILVALTADVDTILQRTAAHG--KRPVL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
+ GD T + L EER Y +A+ V D S +P+ +
Sbjct: 121 DSADGGDRRTAVVK----LLEERRRLYEDADITV------------DTSGRSPLEVTERI 164
Query: 239 LEQIE 243
L++I
Sbjct: 165 LQEIR 169
>gi|254437902|ref|ZP_05051396.1| shikimate kinase [Octadecabacter antarcticus 307]
gi|198253348|gb|EDY77662.1| shikimate kinase [Octadecabacter antarcticus 307]
Length = 193
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 98/182 (53%), Gaps = 14/182 (7%)
Query: 59 CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKET 118
+ LVGMMGSGKT +G+ L+ LG + D D IE + + T +AEIF GE FFR +E
Sbjct: 19 TVVLVGMMGSGKTAIGRTLALKLGVPYVDSDAEIEAAANAT-IAEIFARSGEPFFRNREA 77
Query: 119 EVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPL 177
EV+ +L V+STGGGA N + + G++VWLD L+ L +R+ D+RPL
Sbjct: 78 EVIARLLQSDPCVLSTGGGAYLADRNREAISRHGVAVWLDADLDLLWERVR--HKDTRPL 135
Query: 178 LHQCES----GDAYTE--ALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTP 231
L + GD + E + RL+ L E ++ + ++ E + V DV L P
Sbjct: 136 LRTPDPRKTLGDIFKERAPIYRLADLRAEAKPEFSIDD--MTTEVLRVLASRPDV--LEP 191
Query: 232 VT 233
VT
Sbjct: 192 VT 193
>gi|431795543|ref|YP_007222447.1| shikimate kinase [Echinicola vietnamensis DSM 17526]
gi|430786308|gb|AGA76437.1| shikimate kinase [Echinicola vietnamensis DSM 17526]
Length = 176
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I LVGM GSGK+T+GK L+G LG+ F+D D I + +G S+ IF GEG+FR ET
Sbjct: 7 IVLVGMPGSGKSTLGKTLAGQLGFDFYDLDEEIVKE-EGRSIPAIFMENGEGYFRRTETR 65
Query: 120 VLQK-LSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPL 177
V++K L + V+STGGGA N + + GISV+L+V +E L R+ D RP+
Sbjct: 66 VIEKLLQIDSAFVLSTGGGAPCFNDNMTLINRHGISVFLNVSIEQLLLRLTKNEADKRPM 125
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 220
++G E +L L +R Y + +S ++I+ +
Sbjct: 126 FQGLDTG----EIRLKLQDLLADREVYYEQSKIMLSGDDISTE 164
>gi|389844643|ref|YP_006346723.1| 3-dehydroquinate synthase [Mesotoga prima MesG1.Ag.4.2]
gi|387859389|gb|AFK07480.1| 3-dehydroquinate synthetase [Mesotoga prima MesG1.Ag.4.2]
Length = 495
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 90/146 (61%), Gaps = 13/146 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++L+GMMGSGK+T+G+ILS VL F D D+ IE++ G S++EIF+ GE FR E
Sbjct: 3 VFLIGMMGSGKSTIGRILSSVLDKKFIDMDSEIERA-KGMSISEIFEKEGEKEFRRLEKN 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
+L++L ++VVSTGGG + N + ++ S++L +P L +R++ G RPLL
Sbjct: 62 LLKELVRSDEIVVSTGGGVILDNENRQTLKGENSIYLRLPPADLYRRVSVKG---RPLLR 118
Query: 180 QCESGDAYTEALNRLSTLWEERGEAY 205
+ + E++ R +WEER E Y
Sbjct: 119 EGK------ESIFR---IWEERRELY 135
>gi|422344658|ref|ZP_16425583.1| shikimate kinase [Selenomonas noxia F0398]
gi|355376727|gb|EHG23969.1| shikimate kinase [Selenomonas noxia F0398]
Length = 173
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G MG+GKT++G++L+ LG +F D D IE+ G S+ +F +GE +FR +E E
Sbjct: 4 VVLIGFMGTGKTSIGRLLAARLGCAFHDLDRKIEEQ-HGMSIPAMFAQHGEPYFRAREKE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+ + V++TGGG V P N ++K GI V L ++ + QR AA GT RP+L
Sbjct: 63 AVHAAASRSNAVIATGGGTVKDPENTAALRKNGILVALTADVDTILQRTAAHGT--RPVL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
+ GD + L EER Y +A+ V D S +P+ +
Sbjct: 121 DSADGGDRRAAVVK----LLEERRRLYEDADITV------------DTSGRSPLEVTERI 164
Query: 239 LEQIE 243
L++I
Sbjct: 165 LQEIR 169
>gi|343085204|ref|YP_004774499.1| shikimate kinase [Cyclobacterium marinum DSM 745]
gi|342353738|gb|AEL26268.1| Shikimate kinase [Cyclobacterium marinum DSM 745]
Length = 177
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 95/169 (56%), Gaps = 7/169 (4%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ + I LVGM GSGK+T+G+ L+ L + F+D D LIE + +++EIF GEG+FR
Sbjct: 1 MDAKKIVLVGMPGSGKSTLGRSLAAKLNWPFYDLDDLIEAKAE-KAISEIFSSAGEGYFR 59
Query: 115 EKETEVLQK-LSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGT 172
+ ET VL++ L V++TGGGA N + +KG+SV+LDVPL + +R+
Sbjct: 60 KLETSVLEEILDKKETFVLATGGGAPCYNENMALINKKGVSVYLDVPLNNILERLTNTQV 119
Query: 173 DSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKL 221
RPL ++ E + +L + +R Y A ++ E+ + +L
Sbjct: 120 AIRPLFSSLDT----PEIILKLKDMHSQRNAFYEKAKIKLRGEDSSPEL 164
>gi|304438518|ref|ZP_07398458.1| shikimate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304368601|gb|EFM22286.1| shikimate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 173
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 8/151 (5%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MG+GKT+VG++L+G LG +F D D IE++ G + +IF YGE +FR +E E
Sbjct: 4 IVLIGFMGTGKTSVGRLLAGRLGCAFHDLDKKIEEAC-GIPIPQIFAQYGEPYFRAREKE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ + LV++TGGG V N +++ G+ V L ++ + QR AA G +RP+L
Sbjct: 63 AVRAAAARSGLVIATGGGTVKDAGNAAILRENGVLVALTADVDTILQRTAARG--ARPVL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANAN 209
++GD + L EER YA A+
Sbjct: 121 DGADAGDRRAAVVQ----LLEERRTLYAGAD 147
>gi|334127294|ref|ZP_08501222.1| shikimate kinase [Centipeda periodontii DSM 2778]
gi|333389794|gb|EGK60952.1| shikimate kinase [Centipeda periodontii DSM 2778]
Length = 177
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 95/177 (53%), Gaps = 20/177 (11%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G MG+GKT+VG++L+G LG +F D D IE+ G S+ +F +GE +FR +E E
Sbjct: 8 VVLIGFMGTGKTSVGRLLAGRLGCAFHDLDKKIEEQ-HGMSIPAMFAEHGEPYFRAREKE 66
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ + LV++TGGG V P N + Q G+ V L ++ + +R AA G +RP+L
Sbjct: 67 AVRAAAERTNLVIATGGGTVKDPENVALLRQNGVIVALTADVDTILRRTAARG--ARPVL 124
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIA 235
++GD + L EER Y +A+ V D S +P+ +A
Sbjct: 125 DHADAGDRRAAVVR----LLEERRALYEDADITV------------DTSGRSPLEVA 165
>gi|254477061|ref|ZP_05090447.1| shikimate kinase [Ruegeria sp. R11]
gi|214031304|gb|EEB72139.1| shikimate kinase [Ruegeria sp. R11]
Length = 196
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 87/153 (56%), Gaps = 11/153 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I +VGMMG+GKT VG+ L+ L F D D IE + + T + EIF GE FFR+KE
Sbjct: 22 KTIVMVGMMGAGKTAVGRGLAARLDVPFLDSDHEIEVAANRT-IPEIFARDGEPFFRQKE 80
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
+V+ +L + V+STGGGA N R + +KG+SVWL L+ L R+ D+RP
Sbjct: 81 RQVISRLLEEERGVLSTGGGAFLAEENRRTISEKGVSVWLKADLDVLWNRVKH--RDTRP 138
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LL + D + LS ++ ER YA A+
Sbjct: 139 LLR---TADPHAT----LSAIYAERVPFYAQAD 164
>gi|402772497|ref|YP_006592034.1| 3-dehydroquinate synthase [Methylocystis sp. SC2]
gi|401774517|emb|CCJ07383.1| 3-dehydroquinate synthase [Methylocystis sp. SC2]
Length = 602
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 47 KSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFK 106
++ + L+G+ I LVGMMGSGK+ +G+ L+ LG F D D I + G S+ EIF
Sbjct: 21 RALAVRAALNGKAIVLVGMMGSGKSAIGQRLAVRLGLPFVDADAEIVAAAAGMSIPEIFA 80
Query: 107 LYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQ 165
YGE +FR+ E V+ +L +V++TGGGA P R ++G+SVWLD L+ L +
Sbjct: 81 KYGERYFRDGERRVIMRLLNGGPVVLATGGGAFLDPRTRDRIAERGVSVWLDADLKTLLK 140
Query: 166 RIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWE 199
R+ + RPLL + + + L L+E
Sbjct: 141 RVRR--KNDRPLLQTDDPEETLRQLLEARRPLYE 172
>gi|347761774|ref|YP_004869335.1| shikimate kinase [Gluconacetobacter xylinus NBRC 3288]
gi|347580744|dbj|BAK84965.1| shikimate kinase / 3-dehydroquinate synthase [Gluconacetobacter
xylinus NBRC 3288]
Length = 585
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 94/174 (54%), Gaps = 14/174 (8%)
Query: 37 PIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSV 96
P+D A V + ++ G+ I +VG+MG+GKTT+G+IL+ LG F D D IE++
Sbjct: 28 PLDLAAVGPSAPRQAG---GGQTIVMVGLMGAGKTTIGRILAARLGLPFVDSDEEIERAA 84
Query: 97 DGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVW 155
G S+A++F+ YGE FR E V+++L +V++TGGGA P ++ +S+W
Sbjct: 85 -GCSIADLFQKYGEPEFRRGERLVIRRLLSGPPVVLATGGGAFMDPRTRASVRAHAVSIW 143
Query: 156 LDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
L PL L QR+A RPLL+ T L+ L R YA A+
Sbjct: 144 LRCPLPLLVQRVAE--RTHRPLLNN-------TSPHAVLADLMRIRHPVYAEAD 188
>gi|196232000|ref|ZP_03130856.1| Shikimate kinase [Chthoniobacter flavus Ellin428]
gi|196224122|gb|EDY18636.1| Shikimate kinase [Chthoniobacter flavus Ellin428]
Length = 173
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 84/150 (56%), Gaps = 4/150 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I +G MGSGKT+VG++++ LG+ F D D ++ + G ++EIF +GE +FR+ ET
Sbjct: 5 IVFIGFMGSGKTSVGRLVAQRLGFQFVDTDAVVVERA-GMQISEIFARHGEPWFRDHETS 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
L LS++ + V+STGGG V RP N +Q+ G VWL + + +R++ RPLL
Sbjct: 64 ALSSLSILNRSVISTGGGIVLRPQNRALLQELGFVVWLTASEDVIFERVSR--NKKRPLL 121
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANA 208
+ E L + L++ + N+
Sbjct: 122 QTADPRRTVHELLEQRHDLYQGTAQFTVNS 151
>gi|110680277|ref|YP_683284.1| shikimate kinase [Roseobacter denitrificans OCh 114]
gi|109456393|gb|ABG32598.1| shikimate kinase, putative [Roseobacter denitrificans OCh 114]
Length = 197
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 88/160 (55%), Gaps = 11/160 (6%)
Query: 54 YLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFF 113
++ + + ++GMMG+GKT VG+ L+ +L F D D IE + + T V EIF GE FF
Sbjct: 17 FVLKKTVVMIGMMGAGKTAVGRALAQLLDVPFLDSDHEIEAAANMT-VPEIFARDGEAFF 75
Query: 114 REKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGT 172
R +E+EV+ +L + V+STGGGA N + +G+SVWLD ++ L R+
Sbjct: 76 RARESEVINRLLGGQACVLSTGGGAFLAEANRAAISARGVSVWLDADIDLLWSRVK--HR 133
Query: 173 DSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
D+RPLL + L+ L+E R YA A+ V
Sbjct: 134 DTRPLLRTADPK-------ATLTALFETRVPEYAKADITV 166
>gi|188036033|pdb|2PT5|A Chain A, Crystal Structure Of Shikimate Kinase (Aq_2177) From
Aquifex Aeolicus Vf5
gi|188036034|pdb|2PT5|B Chain B, Crystal Structure Of Shikimate Kinase (Aq_2177) From
Aquifex Aeolicus Vf5
gi|188036035|pdb|2PT5|C Chain C, Crystal Structure Of Shikimate Kinase (Aq_2177) From
Aquifex Aeolicus Vf5
gi|188036036|pdb|2PT5|D Chain D, Crystal Structure Of Shikimate Kinase (Aq_2177) From
Aquifex Aeolicus Vf5
Length = 168
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 89/159 (55%), Gaps = 15/159 (9%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL+G SGK+TVG +LS L F+D D + Q +G S+ +IF+ GE +FR+ E E
Sbjct: 3 IYLIGFXCSGKSTVGSLLSRSLNIPFYDVDEEV-QKREGLSIPQIFEKKGEAYFRKLEFE 61
Query: 120 VLQKLSLMRQLVVSTGG--GAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPL 177
VL+ LS +V+STGG GA +N+ +G +V++D+P E +R + RPL
Sbjct: 62 VLKDLSEKENVVISTGGGLGANEEALNF-XKSRGTTVFIDIPFEVFLERCK--DSKERPL 118
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
L + L+ + L+EER + Y+ A+ +V E
Sbjct: 119 LKR---------PLDEIKNLFEERRKIYSKADIKVKGEK 148
>gi|406661698|ref|ZP_11069812.1| Shikimate kinase [Cecembia lonarensis LW9]
gi|405554449|gb|EKB49534.1| Shikimate kinase [Cecembia lonarensis LW9]
Length = 176
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 94/163 (57%), Gaps = 7/163 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I LVG+ GSGKTT GK+L+ L ++F D D +IEQ G S+ +IF+ GEG FR+ E+
Sbjct: 7 IILVGLPGSGKTTFGKLLAKQLNFAFLDLDQVIEQE-SGLSIGQIFEQDGEGRFRDLESF 65
Query: 120 VLQK-LSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPL 177
L+K L + V+STGGG N + +KG+SV+LDV LE + +R+ RP+
Sbjct: 66 YLKKVLDGIEGFVLSTGGGTPCFNENMDLINEKGVSVYLDVSLEEIMRRLGNDTLGKRPM 125
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 220
SG EA +L +L ER Y + ++S ++I+ +
Sbjct: 126 F----SGLGQGEATLKLKSLLAERENYYLQSKIKLSGDDISTE 164
>gi|322418911|ref|YP_004198134.1| shikimate kinase [Geobacter sp. M18]
gi|320125298|gb|ADW12858.1| Shikimate kinase [Geobacter sp. M18]
Length = 172
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 90/154 (58%), Gaps = 11/154 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L G MG GKT+VG +L+ LG+ F D D +I + G S+ EIF +GE +FRE E+
Sbjct: 7 IFLTGFMGCGKTSVGHLLAQRLGWDFVDLDQVIVEEA-GQSIKEIFADHGEPYFRELESR 65
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L +++ VVSTGGGAV N M Q G V L +E +AQR++ G+ RPLL
Sbjct: 66 MLVRVATRTGQVVSTGGGAVIARGNRAVMRQYGSIVNLTASVETIAQRVS--GSSERPLL 123
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
+ DA E R+ ++ R E YA+A+ R+
Sbjct: 124 ----ANDASCE---RIRSMLAAREEFYADADLRI 150
>gi|163859232|ref|YP_001633530.1| shikimate kinase [Bordetella petrii DSM 12804]
gi|163262960|emb|CAP45263.1| aroK2 [Bordetella petrii]
Length = 206
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 83/142 (58%), Gaps = 4/142 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVGMMG+GKTT+G+ L+ VLG F D D +E G V IF++ GEG FR++E
Sbjct: 37 IFLVGMMGAGKTTIGRGLARVLGREFIDLDHELEARC-GVRVPVIFEIEGEGGFRKREAA 95
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
L + R +V++TGGGAV P N R + ++G+ V+L ++ L +R + +RPLL
Sbjct: 96 ALDHCTQRRGIVLATGGGAVLAPENRRLLRERGVVVYLRASVDELFRRTSR--DRNRPLL 153
Query: 179 HQCESGDAYTEALNRLSTLWEE 200
+ + + R L+EE
Sbjct: 154 ANPDPRGTLCDLMARREPLYEE 175
>gi|345876138|ref|ZP_08827913.1| shikimate kinase [Neisseria weaveri LMG 5135]
gi|417957890|ref|ZP_12600808.1| shikimate kinase [Neisseria weaveri ATCC 51223]
gi|343967095|gb|EGV35345.1| shikimate kinase [Neisseria weaveri LMG 5135]
gi|343967636|gb|EGV35879.1| shikimate kinase [Neisseria weaveri ATCC 51223]
Length = 177
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 83/147 (56%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++L+G+MG+GKTT+GK L+ L FFD D I Q G S+ IF+L GE FR++E+
Sbjct: 11 LFLIGLMGAGKTTLGKQLAQRLNRCFFDSDHEICQRT-GVSIPTIFELEGEQGFRDRESN 69
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ +L+ M +V++TGGGAV RP N +++K G ++L E L +R +RPLL
Sbjct: 70 VINELTHMENIVLATGGGAVLRPENQSFLKKRGTVIYLHASPEVLLKRTQH--DTNRPLL 127
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
L +L L+ R Y
Sbjct: 128 Q-------VDNPLAKLQELYNARDHIY 147
>gi|260575106|ref|ZP_05843107.1| Shikimate kinase [Rhodobacter sp. SW2]
gi|259022728|gb|EEW26023.1| Shikimate kinase [Rhodobacter sp. SW2]
Length = 181
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
G+ + LVGMMG+GK+ VG L+ +LG F D D I ++ S+ EIF GE FFR +
Sbjct: 5 GKTVVLVGMMGAGKSAVGTQLAKLLGVPFRDSDDEIVKAAQ-RSIPEIFARDGEPFFRAR 63
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSR 175
ETEVL +L V+STGGGA P N + G+SVWL LE L QR+ T R
Sbjct: 64 ETEVLGRLVRGEPCVLSTGGGAFLAPQNRALIGASGVSVWLRADLETLWQRVRHKTT--R 121
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
PLLH + L +L R YA A+
Sbjct: 122 PLLHTPNPRET-------LRSLQAARDPVYALAD 148
>gi|393718951|ref|ZP_10338878.1| shikimate kinase [Sphingomonas echinoides ATCC 14820]
Length = 164
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 85/153 (55%), Gaps = 11/153 (7%)
Query: 62 LVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL 121
LVG+MG+GK+TVG+ L+ LG F D DT IE + G S+ +IF +GE +FR+ E V+
Sbjct: 2 LVGLMGAGKSTVGRRLAIRLGLPFVDADTEIETAA-GMSIPDIFDRFGEAYFRDGERRVI 60
Query: 122 QKLSLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
+L ++ V++TGGGA P + +G ++WLD L +R++ D+RPLL
Sbjct: 61 ARLMEGQKRVIATGGGAFVDPQTRAAILDRGYAIWLDAKPSVLVERVSR--RDTRPLLRG 118
Query: 181 CESGDAYTEALNRLSTLWEERGEAYANANARVS 213
+ L L L R YA A+ RVS
Sbjct: 119 -------RDPLAVLEELARVRNPFYATAHLRVS 144
>gi|330993348|ref|ZP_08317283.1| 3-dehydroquinate synthase [Gluconacetobacter sp. SXCC-1]
gi|329759378|gb|EGG75887.1| 3-dehydroquinate synthase [Gluconacetobacter sp. SXCC-1]
Length = 580
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 78/124 (62%), Gaps = 4/124 (3%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
GR I LVG+MG+GKTT+G+IL+ LG F D D IE++ G S+A++F+ YGE FR
Sbjct: 40 GRTIVLVGLMGAGKTTIGRILATTLGLPFVDSDEEIERAA-GCSIADLFQKYGEPEFRRG 98
Query: 117 ETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSR 175
E V+++L +V++TGGGA + + ++ +S+WL PL L QR+A R
Sbjct: 99 ERLVIRRLLSGPPVVLATGGGAFMDQRTRASVREQAVSIWLRCPLPLLVQRVAE--RTHR 156
Query: 176 PLLH 179
PLL+
Sbjct: 157 PLLN 160
>gi|190893663|ref|YP_001980205.1| shikimate kinase [Rhizobium etli CIAT 652]
gi|417109911|ref|ZP_11963454.1| shikimate kinase [Rhizobium etli CNPAF512]
gi|190698942|gb|ACE93027.1| shikimate kinase protein [Rhizobium etli CIAT 652]
gi|327188711|gb|EGE55910.1| shikimate kinase [Rhizobium etli CNPAF512]
Length = 196
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 85/139 (61%), Gaps = 7/139 (5%)
Query: 41 AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTS 100
A LK++++ L R + LVG+MG+GK++VG+I++ LG F D D IE+ V +
Sbjct: 9 ADSLKDRAR---AALGSRNLILVGLMGAGKSSVGRIVASQLGIPFIDSDHEIER-VSRMT 64
Query: 101 VAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVP 159
+AE+F YGE FR ET V+++L VVSTGGGA R++++ G+SVWL
Sbjct: 65 IAELFAAYGEDEFRALETRVIKRLLKSGPRVVSTGGGAFVNERTRRHIKRGGLSVWLKAD 124
Query: 160 LEALAQRIAAVGTDSRPLL 178
L+ L +R+ D+RPLL
Sbjct: 125 LDVLWERVNK--RDTRPLL 141
>gi|95928758|ref|ZP_01311504.1| Shikimate kinase [Desulfuromonas acetoxidans DSM 684]
gi|95135103|gb|EAT16756.1| Shikimate kinase [Desulfuromonas acetoxidans DSM 684]
Length = 169
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 94/184 (51%), Gaps = 24/184 (13%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IY VG MGSGK+TVGK+L+ LG F D D + + S+ IF+ GE FR E+E
Sbjct: 6 IYFVGFMGSGKSTVGKLLADALGMGFIDLDDEVVKR-QQRSINAIFREEGEDVFRRYESE 64
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L++ S+ LV STGGG + NW+ M G+ V+L + R+ G+ RPL+
Sbjct: 65 LLKEFSVKEGLVFSTGGGIIGSERNWQIMNSCGVVVFLACSWPTVLARLE--GSSERPLV 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
+Q + L L L+E R E Y A+ ++ DV LTP + +E
Sbjct: 123 NQND--------LESLKALYESRQELYRRADVQI------------DVDELTPEEVVLEI 162
Query: 239 LEQI 242
+++
Sbjct: 163 KQKL 166
>gi|325265677|ref|ZP_08132366.1| shikimate kinase [Kingella denitrificans ATCC 33394]
gi|324982808|gb|EGC18431.1| shikimate kinase [Kingella denitrificans ATCC 33394]
Length = 177
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 93/157 (59%), Gaps = 12/157 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++L+G+MG+GKTT+G+ L+G L Y F+D D +I Q G ++ IF++ GE FR++E+
Sbjct: 12 LFLIGLMGAGKTTLGRQLAGHLQYPFYDSDNVICQRT-GVNIPTIFEIEGEQGFRQRESM 70
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+Q+L+ M +V++TGGGAV R N ++ +G ++L V E L +R +RPLL
Sbjct: 71 VIQELTAMDNVVLATGGGAVLREENRHCLRNRGTVIYLHVLPEILFERTKY--DKNRPLL 128
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLE 215
+ L++ L+E R E Y A + LE
Sbjct: 129 Q-------VADPLSKFRELYETRHELYCQT-AHMVLE 157
>gi|349686537|ref|ZP_08897679.1| shikimate kinase / 3-dehydroquinate synthase [Gluconacetobacter
oboediens 174Bp2]
Length = 577
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 87/155 (56%), Gaps = 11/155 (7%)
Query: 56 SGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFRE 115
SGR I LVG+MG+GKTT+G+IL+ LG F D D IE++ G ++A++F YGE FR
Sbjct: 36 SGRTIVLVGLMGAGKTTIGRILAARLGVPFVDSDEEIERAA-GCTIADLFHKYGEPEFRR 94
Query: 116 KETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E V+++L +V++TGGGA + + +S+WL PL L QR+A
Sbjct: 95 GERLVIRRLLSGPPVVLATGGGAFMDSRTRASVREHAVSIWLRCPLPVLVQRVA--DRTH 152
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
RPLL+ A A+ L+ L R YA A+
Sbjct: 153 RPLLNA-----APPHAV--LADLMRLRHPVYAEAD 180
>gi|218510607|ref|ZP_03508485.1| shikimate kinase [Rhizobium etli Brasil 5]
Length = 241
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 91/152 (59%), Gaps = 12/152 (7%)
Query: 33 NVHAPIDE-----AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFD 87
+V+ P+ E A LK++++ L R + LVG+MG+GK++VG+I++ LG F D
Sbjct: 41 SVNGPMSEPLLTLADSLKDRARAA---LGSRNLILVGLMGAGKSSVGRIVASQLGIPFID 97
Query: 88 CDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRY 147
D IE+ V ++AE+F YGE FR ET V+++L VVSTGGGA R+
Sbjct: 98 SDHEIER-VSRMTIAELFAAYGEDEFRALETRVIKRLLKSGPRVVSTGGGAFVNERTRRH 156
Query: 148 MQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+++ G+SVWL L+ L +R+ D+RPLL
Sbjct: 157 IKRGGLSVWLKADLDVLWERVNK--RDTRPLL 186
>gi|99081272|ref|YP_613426.1| shikimate kinase [Ruegeria sp. TM1040]
gi|99037552|gb|ABF64164.1| shikimate kinase [Ruegeria sp. TM1040]
Length = 196
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 86/156 (55%), Gaps = 11/156 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I LVGMMG+GKT VG+ L+ L F D D IE + + S+ EIF GE FFREKE
Sbjct: 22 KTIVLVGMMGAGKTAVGRALAARLDVPFLDSDHEIESAAN-MSIPEIFARDGEPFFREKE 80
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+V+ +L V+STGGGA N + + G+SV L L+ L +R+ G D+RP
Sbjct: 81 HQVIARLLKEECGVLSTGGGAFLAERNRTMISEIGVSVCLQADLDVLWKRVK--GRDTRP 138
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
LL S D Y LS L+ R YA A+ +V
Sbjct: 139 LLR---SADPY----QTLSDLYHARVPTYAMADLKV 167
>gi|312130327|ref|YP_003997667.1| shikimate kinase [Leadbetterella byssophila DSM 17132]
gi|311906873|gb|ADQ17314.1| Shikimate kinase [Leadbetterella byssophila DSM 17132]
Length = 177
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 93/152 (61%), Gaps = 9/152 (5%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+++GM SGK+T+G+ L+ L Y F D D IE + +G ++EIF L GE +FR+ ETE
Sbjct: 5 IFMIGMPSSGKSTLGRQLAKELNYEFIDLDKKIELA-EGRKISEIFNLEGEEYFRKIETE 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
L+++ +LV++TGGG N ++++ GISV+LDV + L +R+ ++RP L
Sbjct: 64 HLKRIEPNSRLVIATGGGTPCNGNNMDFIKENGISVFLDVKPKKLEERMRNSKKNNRP-L 122
Query: 179 HQCESGDAYTEAL-NRLSTLWEERGEAYANAN 209
+ ES E L + L+ +E+R E Y A+
Sbjct: 123 YNLES-----ELLVDTLTKTYEDRIETYKRAD 149
>gi|421589459|ref|ZP_16034599.1| shikimate kinase [Rhizobium sp. Pop5]
gi|403705581|gb|EJZ21128.1| shikimate kinase [Rhizobium sp. Pop5]
Length = 196
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 83/139 (59%), Gaps = 7/139 (5%)
Query: 41 AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTS 100
A LK++ + L R + LVG+MG+GK+ VG+I++ LG F D D IE+ V +
Sbjct: 9 ADSLKDR---VRAALGSRNLILVGLMGAGKSAVGRIVASQLGIPFIDSDHEIER-VSRMT 64
Query: 101 VAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVP 159
+AE+F YGE FR ET V+++L VVSTGGGA ++++K G+SVWL
Sbjct: 65 IAELFAAYGEEEFRALETRVMKRLLKSGPRVVSTGGGAFINERTRKHIKKGGLSVWLKAD 124
Query: 160 LEALAQRIAAVGTDSRPLL 178
LE L +R+ D+RPLL
Sbjct: 125 LEVLWERVNK--RDTRPLL 141
>gi|253701266|ref|YP_003022455.1| shikimate kinase [Geobacter sp. M21]
gi|251776116|gb|ACT18697.1| Shikimate kinase [Geobacter sp. M21]
Length = 170
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 100/189 (52%), Gaps = 27/189 (14%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVD--GTSVAEIFKLYGEGFFREKE 117
I+L G MG GKT+VG++LS LG++F D D +I VD GTS+ EIF GE FR E
Sbjct: 5 IFLTGFMGCGKTSVGRVLSHRLGWTFVDLDQVI---VDRAGTSIKEIFASQGEPAFRAVE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
L +++ + VVSTGGGAV N M+ G V L +E +A R+ G RP
Sbjct: 62 AAALSEVASRQSQVVSTGGGAVIAAENREAMRGSGCIVNLTASVETIAARV--TGDSERP 119
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAI 236
LL + DA E R+S + + R + YA+A+ R+ D + T +A
Sbjct: 120 LL----AADASVE---RISFMLQGREQFYADADLRI------------DTTGKTVEAVAS 160
Query: 237 EALEQIEGF 245
E ++ ++GF
Sbjct: 161 EVIDSLKGF 169
>gi|329889982|ref|ZP_08268325.1| shikimate kinase family protein [Brevundimonas diminuta ATCC 11568]
gi|328845283|gb|EGF94847.1| shikimate kinase family protein [Brevundimonas diminuta ATCC 11568]
Length = 189
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 11/163 (6%)
Query: 53 PYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGF 112
P S R I LVG+MG GK+TVG+ L+ LG F D D +IE++ G +V+EIF GE
Sbjct: 11 PLSSVRTIALVGLMGVGKSTVGRRLAARLGLPFADGDHVIEEAA-GMTVSEIFATRGEVE 69
Query: 113 FREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVG 171
FR E V+++L +V++TGGGAV P M Q +SVW+ L+ +A+R+
Sbjct: 70 FRAGEARVMKRLLEGPPIVLATGGGAVLNPDTRALMKQHAVSVWMRADLKVIAERVGR-- 127
Query: 172 TDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
D+RPLL + L L+ L + R Y A+ V +
Sbjct: 128 RDTRPLLRN-------RDPLTALNDLAKARYPIYGEADLTVDV 163
>gi|254487977|ref|ZP_05101182.1| shikimate kinase [Roseobacter sp. GAI101]
gi|214044846|gb|EEB85484.1| shikimate kinase [Roseobacter sp. GAI101]
Length = 198
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 11/153 (7%)
Query: 31 SGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDT 90
SG H D+A N Y + + LVGMMG+GKT VG+ L+ LG F D D
Sbjct: 2 SGFEHTTTDQAPSPTN-------YRLKKTVVLVGMMGAGKTAVGRALALKLGVPFLDSDH 54
Query: 91 LIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ- 149
IE + + T V EIF+ GE FFR++E+EV+ +L ++STGGGA +N +
Sbjct: 55 EIEAAANLT-VPEIFERDGEPFFRKRESEVIARLLDEAPGILSTGGGAFLAQVNRSNIST 113
Query: 150 KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 182
KG+SVWLD L+ L R+ T RPLL +
Sbjct: 114 KGVSVWLDADLDLLWNRVRHRAT--RPLLRTPD 144
>gi|418406013|ref|ZP_12979333.1| shikimate kinase [Agrobacterium tumefaciens 5A]
gi|358007926|gb|EHK00249.1| shikimate kinase [Agrobacterium tumefaciens 5A]
Length = 193
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 104/188 (55%), Gaps = 17/188 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L+GR + VG+MG+GK+ +G++++ L SF D D IE+ V ++AE+F YGE FR
Sbjct: 20 LAGRNVVFVGLMGAGKSAIGRMVAQQLKVSFIDTDVEIER-VSRMTIAELFATYGEEEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTD 173
ET V+++L V+STGGGA R++ +G +S+WL +E L +R+ D
Sbjct: 79 ALETRVVKRLLRGGPKVISTGGGAFINDNTRRHITRGSVSLWLKADIEVLWERVNK--RD 136
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
RPLL + E+ A L+ L E+R YA A+ + ++ K++ +T V
Sbjct: 137 HRPLL-KTENPKAT------LAALMEKRYPIYAEADLTIESRDV-----RKEI-IVTEVL 183
Query: 234 IAIEALEQ 241
AI LEQ
Sbjct: 184 AAIAGLEQ 191
>gi|300870692|ref|YP_003785563.1| shikimate kinase [Brachyspira pilosicoli 95/1000]
gi|431808479|ref|YP_007235377.1| shikimate kinase [Brachyspira pilosicoli P43/6/78]
gi|300688391|gb|ADK31062.1| shikimate kinase [Brachyspira pilosicoli 95/1000]
gi|430781838|gb|AGA67122.1| shikimate kinase [Brachyspira pilosicoli P43/6/78]
Length = 173
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 90/154 (58%), Gaps = 7/154 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I+++G+ GSGK+ + K+L+ + YSFFD D +IE S + ++ +IF+ GE +FRE E
Sbjct: 6 KTIFVIGLPGSGKSDLSKLLAEYINYSFFDMDKVIE-SREKKTINKIFEDNGEEYFREVE 64
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
++VL++LS ++ V+STGGGA+ + N M ++GI +++D P E + I RP
Sbjct: 65 SDVLEELSNIKNAVISTGGGAILKEKNRALMKERGIVIFIDRPAELIVNNI---NVSERP 121
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANA 210
LL Q + E + L+ E + N N
Sbjct: 122 LLVQ--DKNKLIELSKKRDALYRECAKVIFNHNT 153
>gi|86359409|ref|YP_471301.1| shikimate kinase [Rhizobium etli CFN 42]
gi|86283511|gb|ABC92574.1| shikimate kinase protein [Rhizobium etli CFN 42]
Length = 195
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 85/139 (61%), Gaps = 7/139 (5%)
Query: 41 AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTS 100
A LK++++ L R + LVG+MG+GK++VG+I++ LG F D D IE+ V +
Sbjct: 9 ANSLKDRAR---AALGSRNLVLVGLMGAGKSSVGRIVASQLGIPFIDSDHEIER-VSRMT 64
Query: 101 VAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVP 159
+AE+F YGE FR ET V+++L VVSTGGGA R+++K G+S+WL
Sbjct: 65 IAELFAAYGEEEFRALETRVMKRLLKSGPRVVSTGGGAFINGRTRRHIKKGGLSIWLKAD 124
Query: 160 LEALAQRIAAVGTDSRPLL 178
L+ L +R+ D+RPLL
Sbjct: 125 LDVLWERVNK--RDTRPLL 141
>gi|325290048|ref|YP_004266229.1| shikimate kinase [Syntrophobotulus glycolicus DSM 8271]
gi|324965449|gb|ADY56228.1| Shikimate kinase [Syntrophobotulus glycolicus DSM 8271]
Length = 170
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 80/124 (64%), Gaps = 4/124 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I LVG M +GKTTVGK+L+ LG++F D D IE++ G S+ EIFK YGE FR++E
Sbjct: 3 KNIILVGFMATGKTTVGKLLAHRLGWAFLDTDQEIERTT-GLSIPEIFKRYGEESFRKEE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
T ++++++ M+ V+STGGG V +W+ +++ GI V L + + R A + RP
Sbjct: 62 TRLVRQITKMKSTVISTGGGLVLPSDHWKLLEEVGIMVHLWADPDVIIAR--AGQNEERP 119
Query: 177 LLHQ 180
LL Q
Sbjct: 120 LLQQ 123
>gi|240851371|ref|YP_002972774.1| shikimate kinase [Bartonella grahamii as4aup]
gi|240268494|gb|ACS52082.1| shikimate kinase [Bartonella grahamii as4aup]
Length = 210
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L + + LVG+MG+GK+ +GK ++ +L F+D D IE++ T + E+F++YGE FR
Sbjct: 22 LDKKALVLVGLMGAGKSVIGKRVATMLRLPFYDSDQEIEKAAQMT-ITELFEIYGESEFR 80
Query: 115 EKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
E V+ L LV++TGGGA + I Q GIS+WL V L+ L +R++
Sbjct: 81 ALEQRVILNLIKKSPLVLATGGGAYINENIRKAIHQNGISIWLKVDLDILMKRVSK--HP 138
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
+RPLL + + L E+R YA AN ++
Sbjct: 139 ARPLLQTANPKET-------MQKLMEQRYPIYAKANLTIN 171
>gi|346992452|ref|ZP_08860524.1| shikimate kinase [Ruegeria sp. TW15]
Length = 195
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 85/153 (55%), Gaps = 11/153 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + LVGMMG+GKT VG+ L+ LG F D DT IE + + T + EIF GE FFR KE
Sbjct: 21 KTVVLVGMMGAGKTAVGRALAARLGVPFLDSDTEIESAANMT-IPEIFARDGEAFFRSKE 79
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
++++ +L + ++STGGGA N + + +G SVWL L+ L R+ D+RP
Sbjct: 80 SQIIGRLLDEERGILSTGGGAFLAEGNRKMISDRGASVWLKADLDVLWNRVKH--KDTRP 137
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LL + D Y L L+E R Y ++
Sbjct: 138 LLR---TADPYAT----LRDLYEARVPIYEQSD 163
>gi|171915132|ref|ZP_02930602.1| shikimate kinase [Verrucomicrobium spinosum DSM 4136]
Length = 471
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
GR I +VG+MGSGK+TVG++ + LG+ F D D +I + T + +IF GE FR +
Sbjct: 301 GRNIIIVGLMGSGKSTVGRMAAHSLGFGFVDTDQIIIEKARKT-IPDIFAAEGEAGFRYR 359
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSR 175
ETE L+ L LV++TGGG VT+P N + Q G VWL+ L QR V ++ R
Sbjct: 360 ETEALKSLLGKEGLVIATGGGIVTQPANLPILKQLGYVVWLNADPNTLYQR--TVHSNDR 417
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
PLL + L L+E R Y A
Sbjct: 418 PLLRNHDPAAT-------LRHLYETRRPMYQKA 443
>gi|219669553|ref|YP_002459988.1| shikimate kinase [Desulfitobacterium hafniense DCB-2]
gi|423073498|ref|ZP_17062237.1| shikimate kinase [Desulfitobacterium hafniense DP7]
gi|219539813|gb|ACL21552.1| Shikimate kinase [Desulfitobacterium hafniense DCB-2]
gi|361855576|gb|EHL07539.1| shikimate kinase [Desulfitobacterium hafniense DP7]
Length = 207
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 94/170 (55%), Gaps = 17/170 (10%)
Query: 45 KNKSQEIEPYLSGRC----IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTS 100
KN + E LSG I LVG MG+GK+TVG+ L+ +LG F D D IE+ + T
Sbjct: 18 KNDALEEGEGLSGAAHNDNIVLVGFMGTGKSTVGRRLAKLLGREFIDTDLEIERLTEMT- 76
Query: 101 VAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVP 159
V+EIF+ +GE FR +E ++++L+ + V++TGGG V P NWR + Q G+ + L P
Sbjct: 77 VSEIFRRHGETRFRSEERLLVKRLAEHKGYVIATGGGTVLNPENWRDLAQSGVIIGLYAP 136
Query: 160 LEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
L+ + +RI + RPLL GD + LW +R Y AN
Sbjct: 137 LDEIYKRIGY--RNDRPLLR----GDRQV-----VEELWAKRQPIYNQAN 175
>gi|374856713|dbj|BAL59566.1| 3-dehydroquinate synthase [uncultured candidate division OP1
bacterium]
Length = 582
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 92/158 (58%), Gaps = 10/158 (6%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL+G+MGSGK+TVG++L+ VLG F D D I G ++++IF+ GE FR +E+
Sbjct: 13 IYLLGVMGSGKSTVGRLLACVLGRDFLDLDEEIVTRA-GCTISQIFEREGEQGFRARESA 71
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL+++ + VV+ GGGAV + NW + Q GIS++L E LAQR+ G RP+L
Sbjct: 72 VLREVVQRKNSVVALGGGAVLKDENWELVRQTGISIYLKARPEILAQRVE--GDTERPVL 129
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
G + +LS + E R Y A+ ++EN
Sbjct: 130 ----VGLTPPQRRQKLSEILERRKARYEQAH--YTIEN 161
>gi|71066433|ref|YP_265160.1| shikimate kinase [Psychrobacter arcticus 273-4]
gi|115312164|sp|Q4FQI2.1|AROK_PSYA2 RecName: Full=Shikimate kinase; Short=SK
gi|71039418|gb|AAZ19726.1| shikimate kinase [Psychrobacter arcticus 273-4]
Length = 186
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 77/122 (63%), Gaps = 4/122 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++LVG MG+GKTT+G++L+ LG +F D D +E S G +A IF GE FRE+ET
Sbjct: 8 VFLVGPMGAGKTTIGRLLAKQLGRTFVDSDWYVE-SQTGADIAWIFDKEGEAGFRERETR 66
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+ +L+ Q+V++TGGGAV N ++ Q+GI ++L+ P++ R A SRPLL
Sbjct: 67 AIDELTQQPQIVLATGGGAVMAAENREFLKQRGIVIYLNAPVDVQMARTAK--DKSRPLL 124
Query: 179 HQ 180
Q
Sbjct: 125 QQ 126
>gi|78189187|ref|YP_379525.1| shikimate kinase [Chlorobium chlorochromatii CaD3]
gi|115312143|sp|Q3AR93.1|AROK_CHLCH RecName: Full=Shikimate kinase; Short=SK
gi|78171386|gb|ABB28482.1| shikimate kinase [Chlorobium chlorochromatii CaD3]
Length = 190
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 98/174 (56%), Gaps = 13/174 (7%)
Query: 52 EPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEG 111
EP L I+L G GSGK+T+G +L+ LGY F D D LIE+ G S+ +IF GE
Sbjct: 4 EPSL----IFLTGFSGSGKSTIGPLLANSLGYEFVDLDALIEREC-GKSINQIFAEAGEA 58
Query: 112 FFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAV 170
FR+ E + L+ L + R+ VVS GGG + +P + + Q G V+L P++ LA+R++
Sbjct: 59 AFRQHEEQTLETLLMRRKTVVSLGGGVLEQPRAFELVRQAGTVVYLKSPVKTLARRLS-- 116
Query: 171 GTDSRPLLHQCESGDAYT--EALNRLSTLWEERGEAYANANARVSLENIAVKLG 222
RPLL + E G+ + E +++ L R Y A+ +++E A ++G
Sbjct: 117 NKTDRPLL-KGEQGEKLSQEEIEQKIAELLARREPRYECAD--ITVETDAKRIG 167
>gi|225174905|ref|ZP_03728902.1| Shikimate kinase [Dethiobacter alkaliphilus AHT 1]
gi|225169545|gb|EEG78342.1| Shikimate kinase [Dethiobacter alkaliphilus AHT 1]
Length = 171
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 97/191 (50%), Gaps = 26/191 (13%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+SG+ + L+G MG+GKT VG++L+ +L F D D I + +G S+ E+F GE +FR
Sbjct: 4 ISGKNLVLIGFMGTGKTEVGRLLADLLNRRFVDTDRRISER-EGMSIPELFAARGEQYFR 62
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTD 173
E EV+ +L+ + LVVSTGGG V N +++ G VWLD ++ L+ R+ G
Sbjct: 63 AAEKEVVAELASQKGLVVSTGGGVVLDGGNVEHLRLSGFVVWLDADVDTLSLRLQ--GDK 120
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
+RPLL D E R L+ E A+ RV D + P
Sbjct: 121 TRPLLQS----DGLAELYKRREALYRE------AAHVRV------------DTAGKAPFV 158
Query: 234 IAIEALEQIEG 244
+A E + ++G
Sbjct: 159 VAREVVALLQG 169
>gi|424897269|ref|ZP_18320843.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393181496|gb|EJC81535.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 196
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + LVG+MG+GK+ VG+I++ LG F D D IE+ V ++AE+F YGE FR
Sbjct: 20 LGSRNLILVGLMGAGKSAVGRIVASQLGIPFIDSDHEIER-VSRMTIAELFAAYGEEEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
ET V+++L VVSTGGGA R+++K G+SVWL L+ L +R+ D
Sbjct: 79 ALETRVMKRLLKGGPRVVSTGGGAFINERTRRHIRKGGVSVWLKADLDVLWERVNK--RD 136
Query: 174 SRPLL 178
+RPLL
Sbjct: 137 TRPLL 141
>gi|375084651|ref|ZP_09731511.1| hypothetical protein HMPREF9454_00122 [Megamonas funiformis YIT
11815]
gi|374567898|gb|EHR39096.1| hypothetical protein HMPREF9454_00122 [Megamonas funiformis YIT
11815]
Length = 172
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 82/151 (54%), Gaps = 9/151 (5%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MGSGK+ GK+L+ LGYSF D DT IEQ T + ++F GE FR++ET
Sbjct: 5 IVLIGFMGSGKSITGKLLAYRLGYSFVDTDTAIEQEYK-TKIKDMFAKEGEAIFRQRETA 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+QKL+ V+STGGG T+ + + ++K GI + L + +R G D RPLL
Sbjct: 64 TIQKLAQKSHQVISTGGGVATKETDMQELRKNGIVIALTAMPHTILKR---TGNDKRPLL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANAN 209
+ + E L + L +R Y A+
Sbjct: 121 AKKSN----EERLKTIIELMAKRAPFYKKAD 147
>gi|56696518|ref|YP_166875.1| shikimate kinase [Ruegeria pomeroyi DSS-3]
gi|81350011|sp|Q5LSY0.1|AROK_SILPO RecName: Full=Shikimate kinase; Short=SK
gi|56678255|gb|AAV94921.1| shikimate kinase [Ruegeria pomeroyi DSS-3]
Length = 195
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + +VGMMG+GKT VG+ L+ LG F D D IE + + S+ EIF+ GE FFR++E
Sbjct: 21 KTVVMVGMMGAGKTAVGRALAQRLGVPFLDSDAEIESAAN-MSIPEIFERDGEAFFRDRE 79
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
+ V+ +L V+STGGGA N R + + G+SVWL L L R+ D+RP
Sbjct: 80 SRVIARLLEGAPCVLSTGGGAFLAEANRRMISEHGVSVWLKADLTVLWNRVR--HKDTRP 137
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LL + L L+E R Y+ A+
Sbjct: 138 LLRTADPRAT-------LRALYEARVPLYSEAD 163
>gi|340785653|ref|YP_004751118.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Collimonas
fungivorans Ter331]
gi|340550920|gb|AEK60295.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Collimonas
fungivorans Ter331]
Length = 607
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 17/171 (9%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVG+MG+GKTTVG+ L+ L F D D IE G S+ IF++ GE FR++ETE
Sbjct: 37 IFLVGLMGAGKTTVGRALAKKLNKLFIDSDHEIEART-GVSIPLIFEIEGEESFRQRETE 95
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V++ LS R +V++TGGGAV RP N Y++ +G ++L + + QR + +RPLL
Sbjct: 96 VIRDLSGRRGIVLATGGGAVMRPENREYLKTRGTVIYLRASIHNILQRTSR--DKNRPLL 153
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 229
+ RL L +R Y + + +I + G +V L
Sbjct: 154 QTADP-------RRRLEELSRQREPYYRD------VADIVIDTGRPNVQFL 191
>gi|83942299|ref|ZP_00954760.1| shikimate kinase [Sulfitobacter sp. EE-36]
gi|83846392|gb|EAP84268.1| shikimate kinase [Sulfitobacter sp. EE-36]
Length = 171
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 85/153 (55%), Gaps = 11/153 (7%)
Query: 62 LVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL 121
+VGMMG+GKT VG+ L+ LG F D D IE + + T V EIF+ GE FFR++ETEV+
Sbjct: 1 MVGMMGAGKTAVGRALAAKLGVPFVDSDHEIEAAANLT-VPEIFERDGEPFFRKRETEVI 59
Query: 122 QKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
+L ++STGGGA N + +G+SVWLD L+ L R+ SRPLL
Sbjct: 60 SRLLDKEPGILSTGGGAFLAEANRENISARGVSVWLDADLDLLWNRVRY--KTSRPLLRT 117
Query: 181 CESGDAYTEALNRLSTLWEERGEAYANANARVS 213
+ TE L+E+R Y A+ V+
Sbjct: 118 ADPRGTLTE-------LYEKRVPIYRLADMTVA 143
>gi|399992601|ref|YP_006572841.1| shikimate kinase AroK [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398657156|gb|AFO91122.1| shikimate kinase AroK [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 196
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 94/172 (54%), Gaps = 11/172 (6%)
Query: 39 DEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDG 98
++ Q L P + I +VGMMG+GKT VG+ L+ L F D D IE + +
Sbjct: 3 EKEQTLSGAGDRRVPGALKKTIVMVGMMGAGKTAVGRALAARLQAPFLDSDHEIEAAANR 62
Query: 99 TSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLD 157
T + EIF GE FFR+KE +V+++L + V+STGGGA N + + ++G+++WL+
Sbjct: 63 T-IPEIFARDGEPFFRKKERQVIRRLLDEERGVLSTGGGAFLAEENRQIISERGVAIWLN 121
Query: 158 VPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LE L R+ D+RPLL + E A LS L+ +R YA A+
Sbjct: 122 ADLEVLWNRVKH--RDTRPLL-RTEDPHAT------LSALYHDRVPYYAQAD 164
>gi|347528162|ref|YP_004834909.1| shikimate kinase [Sphingobium sp. SYK-6]
gi|345136843|dbj|BAK66452.1| shikimate kinase [Sphingobium sp. SYK-6]
Length = 179
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 14/171 (8%)
Query: 43 VLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVA 102
V +K ++ P S + LVG+MG GK+T+G+ L+ LG F D D IE++ G S+
Sbjct: 2 VRNDKYEDRRPQTS---LVLVGLMGVGKSTIGRRLAARLGLPFVDADDEIERAA-GMSIQ 57
Query: 103 EIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLE 161
EIF +GE FR+ E V+ +L V++TGGGA R ++K +++WLD ++
Sbjct: 58 EIFDTFGEAQFRDGERRVIARLIDGTPKVIATGGGAFVNEDTRRLILEKAVAIWLDANID 117
Query: 162 ALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
L +R++ D RPLL + + T+ L +ER Y+ A RV
Sbjct: 118 ILVERVSR--RDGRPLLRNRNAREVLTQ-------LADERRPFYSQAPIRV 159
>gi|406936069|gb|EKD69881.1| shikimate kinase I, partial [uncultured bacterium]
Length = 147
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 85/149 (57%), Gaps = 11/149 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVG MG+GKT+VG+ L+ L F+D D IE + G S++ IF L G FR++E +
Sbjct: 8 IFLVGPMGAGKTSVGRYLAKKLNKDFYDSDEEIENRM-GVSLSWIFDLEGMAGFRQREMK 66
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ +LS + +V+STGGG V P ++ Q+G V+++V LE R+ RPLL
Sbjct: 67 VIDELSQLHNIVLSTGGGCVETPEVREFLRQRGTVVYMEVSLETQLNRLKR--DKKRPLL 124
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYAN 207
GD E L R LWEER Y N
Sbjct: 125 Q----GDNPQEVLIR---LWEEREPFYEN 146
>gi|350563406|ref|ZP_08932228.1| Shikimate kinase [Thioalkalimicrobium aerophilum AL3]
gi|349779270|gb|EGZ33617.1| Shikimate kinase [Thioalkalimicrobium aerophilum AL3]
Length = 175
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 89/152 (58%), Gaps = 11/152 (7%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
++ + I+LVG MG+GK+TVG+IL+ LGY F D D IE G ++ IF + GEG FR
Sbjct: 1 MNKQSIFLVGPMGAGKSTVGRILAEKLGYEFIDSDHEIEART-GVTIPVIFDIEGEGGFR 59
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD 173
+E+ V+ ++ + LV++TGGGAV N R++ +G V+L + AL QR
Sbjct: 60 ARESAVIDDITQLPGLVLATGGGAVLSADNRRHLAARGFVVYLRSTVPALVQRTK--NDR 117
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
+RPLL Q ++ +A ++ L ERG Y
Sbjct: 118 NRPLL-QTDNPEAV------IAHLLTERGPLY 142
>gi|406894331|gb|EKD39171.1| hypothetical protein ACD_75C00488G0005 [uncultured bacterium]
Length = 171
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 80/149 (53%), Gaps = 9/149 (6%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L G MGSGKTTVGK+L+ L Y F D D LIEQ G SV EIFK GE FR+ E E
Sbjct: 6 IILTGFMGSGKTTVGKLLARQLNYLFVDTDHLIEQRC-GMSVQEIFKNKGEATFRQMEAE 64
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVW-LDVPLEALAQRIAAVGTDSRPLL 178
+ ++L +V++TGG + P+N + + SV+ L + + QR+A RPLL
Sbjct: 65 IARELGAGEGMVIATGGRLMLDPLNAQVLGAQGSVYCLAAQPDEILQRVARSAQGQRPLL 124
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYAN 207
+ L R+ L ER E YA
Sbjct: 125 D-------TSNPLERIVDLIREREEGYAR 146
>gi|68248812|ref|YP_247924.1| shikimate kinase [Haemophilus influenzae 86-028NP]
gi|145633784|ref|ZP_01789508.1| shikimate kinase [Haemophilus influenzae 3655]
gi|145635643|ref|ZP_01791340.1| shikimate kinase [Haemophilus influenzae PittAA]
gi|145637371|ref|ZP_01793031.1| shikimate kinase [Haemophilus influenzae PittHH]
gi|145641547|ref|ZP_01797125.1| shikimate kinase [Haemophilus influenzae R3021]
gi|229845199|ref|ZP_04465333.1| shikimate kinase [Haemophilus influenzae 6P18H1]
gi|229847382|ref|ZP_04467483.1| shikimate kinase [Haemophilus influenzae 7P49H1]
gi|81336774|sp|Q4QNY3.1|AROK_HAEI8 RecName: Full=Shikimate kinase; Short=SK
gi|68057011|gb|AAX87264.1| shikimate kinase [Haemophilus influenzae 86-028NP]
gi|144985355|gb|EDJ92185.1| shikimate kinase [Haemophilus influenzae 3655]
gi|145267116|gb|EDK07123.1| shikimate kinase [Haemophilus influenzae PittAA]
gi|145269463|gb|EDK09406.1| shikimate kinase [Haemophilus influenzae PittHH]
gi|145273838|gb|EDK13706.1| shikimate kinase [Haemophilus influenzae 22.4-21]
gi|229809708|gb|EEP45433.1| shikimate kinase [Haemophilus influenzae 7P49H1]
gi|229811910|gb|EEP47605.1| shikimate kinase [Haemophilus influenzae 6P18H1]
Length = 180
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 85/145 (58%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMDFIDSDAVIEERT-GADISWIFDLEGEDGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ M+ +V+STGGGAV N Y+ +GI ++L+ +E QR RP
Sbjct: 64 ERIINELTQMQGIVLSTGGGAVLSKENRNYLSARGIVIYLETTVEKQFQRTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL E+ E L ++ + L+EE
Sbjct: 122 LLQDAENPRQVLEDLAKIRNPLYEE 146
>gi|16272170|ref|NP_438376.1| shikimate kinase [Haemophilus influenzae Rd KW20]
gi|145628514|ref|ZP_01784314.1| shikimate kinase [Haemophilus influenzae 22.1-21]
gi|145639734|ref|ZP_01795336.1| shikimate kinase [Haemophilus influenzae PittII]
gi|148827345|ref|YP_001292098.1| shikimate kinase [Haemophilus influenzae PittGG]
gi|260580911|ref|ZP_05848735.1| shikimate kinase [Haemophilus influenzae RdAW]
gi|260582426|ref|ZP_05850218.1| shikimate kinase [Haemophilus influenzae NT127]
gi|319775923|ref|YP_004138411.1| shikimate kinase I [Haemophilus influenzae F3047]
gi|319898172|ref|YP_004136369.1| shikimate kinase i [Haemophilus influenzae F3031]
gi|329123784|ref|ZP_08252342.1| shikimate kinase [Haemophilus aegyptius ATCC 11116]
gi|378696336|ref|YP_005178294.1| shikimate kinase I [Haemophilus influenzae 10810]
gi|1168515|sp|P43880.1|AROK_HAEIN RecName: Full=Shikimate kinase; Short=SK
gi|166219246|sp|A5UG09.1|AROK_HAEIG RecName: Full=Shikimate kinase; Short=SK
gi|1573166|gb|AAC21875.1| shikimic acid kinase I (aroK) [Haemophilus influenzae Rd KW20]
gi|144978984|gb|EDJ88670.1| shikimate kinase [Haemophilus influenzae 22.1-21]
gi|145271102|gb|EDK11017.1| shikimate kinase [Haemophilus influenzae PittII]
gi|148718587|gb|ABQ99714.1| shikimate kinase [Haemophilus influenzae PittGG]
gi|260092400|gb|EEW76339.1| shikimate kinase [Haemophilus influenzae RdAW]
gi|260094577|gb|EEW78473.1| shikimate kinase [Haemophilus influenzae NT127]
gi|301168859|emb|CBW28450.1| shikimate kinase I [Haemophilus influenzae 10810]
gi|309750376|gb|ADO80360.1| Shikimate kinase I [Haemophilus influenzae R2866]
gi|317433678|emb|CBY82065.1| shikimate kinase I [Haemophilus influenzae F3031]
gi|317450514|emb|CBY86731.1| shikimate kinase I [Haemophilus influenzae F3047]
gi|327469271|gb|EGF14742.1| shikimate kinase [Haemophilus aegyptius ATCC 11116]
Length = 180
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 85/145 (58%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMDFIDSDAVIEERT-GADISWIFDLEGEDGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ M+ +V+STGGGAV N Y+ +GI ++L+ +E QR RP
Sbjct: 64 ERIINELTQMQGIVLSTGGGAVLSKENRNYLSARGIVIYLETTVEKQFQRTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL E+ E L ++ + L+EE
Sbjct: 122 LLQDAENPRQVLEDLAKIRNPLYEE 146
>gi|254511488|ref|ZP_05123555.1| shikimate kinase [Rhodobacteraceae bacterium KLH11]
gi|221535199|gb|EEE38187.1| shikimate kinase [Rhodobacteraceae bacterium KLH11]
Length = 195
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 11/153 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + LVGMMG+GKT VG+ L+ LG F D D IE + + T + EIF GE FFR KE
Sbjct: 21 KTVVLVGMMGAGKTAVGRALAARLGVPFLDSDAEIESAANMT-IPEIFARDGEAFFRSKE 79
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
T+++ +L + ++STGGGA N + + ++G SVWL L L R+ D+RP
Sbjct: 80 TQIIGRLLDEEKGILSTGGGAFLTEANRKMISERGASVWLRADLGVLWNRVKH--KDTRP 137
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LL + D Y L L++ R Y A+
Sbjct: 138 LLR---TADPYAT----LRDLYQARVPIYEQAD 163
>gi|374328418|ref|YP_005078602.1| shikimate kinase [Pseudovibrio sp. FO-BEG1]
gi|359341206|gb|AEV34580.1| Shikimate kinase [Pseudovibrio sp. FO-BEG1]
Length = 207
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
Query: 45 KNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEI 104
+ + Q I L + I LVG+MG GK+TVG+ L+ L +F D DT IE++ D S++EI
Sbjct: 12 RQRQQNILKRLGNKPIVLVGIMGCGKSTVGRRLAQYLSLNFVDADTEIEKAAD-RSISEI 70
Query: 105 FKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEAL 163
F +GE +FR+ E V+ +L V++TGGGA + R +KGIS+W+ L +
Sbjct: 71 FAEHGESYFRQGEKRVIARLLDEGPQVLATGGGAFINEETRSRIKEKGISIWMKAELPVI 130
Query: 164 AQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEE 200
R+ T RPLL + + ++ ++EE
Sbjct: 131 MTRVRKRPT--RPLLQTADPEATMQKLMDERYPIYEE 165
>gi|257095714|ref|YP_003169355.1| shikimate kinase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257048238|gb|ACV37426.1| Shikimate kinase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 178
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 73/123 (59%), Gaps = 4/123 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R +YLVG+MG+GKTT+GK L+ L Y F D D IE G S+ IF++ GE FR +E
Sbjct: 8 RNVYLVGLMGAGKTTIGKALARRLAYGFVDSDHEIEART-GVSLPTIFEIEGEEGFRRRE 66
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
V+ L+ + VV+TGGG V RP N ++ G ++LDVPL+ L +R RP
Sbjct: 67 ALVIADLARLGGQVVATGGGVVLRPDNRENLKDSGFVIYLDVPLQTLCERTRH--DKGRP 124
Query: 177 LLH 179
LL
Sbjct: 125 LLQ 127
>gi|384918293|ref|ZP_10018375.1| shikimate kinase [Citreicella sp. 357]
gi|384467778|gb|EIE52241.1| shikimate kinase [Citreicella sp. 357]
Length = 191
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 11/160 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + LVGMMG+GKT VGK L+ L F D D IE + + S+AEIF+ GE FFR +E
Sbjct: 15 KTVVLVGMMGAGKTAVGKALATALRVPFRDSDAEIESAAN-MSIAEIFERDGEPFFRARE 73
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
T+++ +L V+STGGGA R N + ++G++VWLD L L R+ T RP
Sbjct: 74 TQIISRLLDGPPAVLSTGGGAYMRAENRDMITRRGVAVWLDAALPVLWNRVRHKST--RP 131
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
LL + D + L ++E R Y A+ V+ E
Sbjct: 132 LLR---TPDPHAT----LRDIYEARVPVYRLADLTVTSET 164
>gi|145631334|ref|ZP_01787106.1| shikimate kinase [Haemophilus influenzae R3021]
gi|148825530|ref|YP_001290283.1| shikimate kinase [Haemophilus influenzae PittEE]
gi|166219245|sp|A5UAU9.1|AROK_HAEIE RecName: Full=Shikimate kinase; Short=SK
gi|144983119|gb|EDJ90619.1| shikimate kinase [Haemophilus influenzae R3021]
gi|148715690|gb|ABQ97900.1| shikimate kinase [Haemophilus influenzae PittEE]
Length = 180
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 85/145 (58%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMDFIDSDAVIEERT-GADISWIFDLEGEDGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ M+ +V+STGGGAV N Y+ +GI ++L+ +E QR RP
Sbjct: 64 ERIINELTQMQGIVLSTGGGAVLSKENRNYLSARGIVIYLETTVEKQFQRTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL E+ E L ++ + L+EE
Sbjct: 122 LLQDAENPRQVLEDLAKIRNPLYEE 146
>gi|399036452|ref|ZP_10733522.1| shikimate kinase [Rhizobium sp. CF122]
gi|398065984|gb|EJL57590.1| shikimate kinase [Rhizobium sp. CF122]
Length = 195
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 7/139 (5%)
Query: 41 AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTS 100
A+ LK++++ L R + LVG+MG+GK++VG+I++ LG F D D IE+ V S
Sbjct: 9 AESLKDRAR---AALGSRNLILVGLMGAGKSSVGRIVAHQLGIPFVDSDAEIEK-VSRMS 64
Query: 101 VAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVP 159
++E+F YGE FR E+ V+++L VVSTGGGA ++++K G+S+WL
Sbjct: 65 ISELFAAYGEEEFRALESRVMKRLLKNGPRVVSTGGGAFINDRTRKHIKKGGVSIWLKAD 124
Query: 160 LEALAQRIAAVGTDSRPLL 178
L+ L +R++ D+RPLL
Sbjct: 125 LDVLWERVSK--RDTRPLL 141
>gi|87199917|ref|YP_497174.1| shikimate kinase [Novosphingobium aromaticivorans DSM 12444]
gi|87135598|gb|ABD26340.1| shikimate kinase [Novosphingobium aromaticivorans DSM 12444]
Length = 216
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 15/157 (9%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
GR + LVGMMG GKTTVG+ L+ +L F D D IE++ + EIF YGE +FR+
Sbjct: 44 GRPLVLVGMMGVGKTTVGRKLASLLHVPFVDADEEIERAAH-MPIPEIFATYGEPYFRDG 102
Query: 117 ETEVLQKL----SLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVG 171
E V+ +L + V+STGGGA P +++GI+VWLD ++ L +R+
Sbjct: 103 ERRVIARLMGTGRNTDRKVLSTGGGAFCDPATRALILERGIAVWLDSDVDTLVERVGR-- 160
Query: 172 TDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
D+RPLL ++G+ E L RL +ER YA A
Sbjct: 161 KDNRPLL---KTGNPR-EILTRLK---DEREPFYAQA 190
>gi|410028448|ref|ZP_11278284.1| shikimate kinase [Marinilabilia sp. AK2]
Length = 176
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 93/163 (57%), Gaps = 7/163 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I LVG+ GSGKTT GK L+ L ++F D D +IEQ G ++++IF+ GEG FRE E+
Sbjct: 7 IVLVGLPGSGKTTFGKALAKQLNFTFIDLDQVIEQET-GNTISQIFEQEGEGRFRELESF 65
Query: 120 VLQK-LSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPL 177
L+K L + ++STGGG N + +KG+SV+LDV LE + +R+ RP+
Sbjct: 66 YLKKVLEGIEGFILSTGGGTPCFNDNMDLINEKGVSVYLDVSLEEIIRRLGKDAFGKRPM 125
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 220
SG EA+ ++ L R Y A ++S ++I+ +
Sbjct: 126 F----SGLGDGEAILKIKNLLASRENYYLQAKIKLSGDDISTE 164
>gi|402489932|ref|ZP_10836725.1| shikimate kinase [Rhizobium sp. CCGE 510]
gi|401811271|gb|EJT03640.1| shikimate kinase [Rhizobium sp. CCGE 510]
Length = 196
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 84/139 (60%), Gaps = 7/139 (5%)
Query: 41 AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTS 100
A LK++++ L R + LVG+MG+GK++VG+I++ LG F D D IE+ V +
Sbjct: 9 ADSLKDRARA---ALGSRNLILVGLMGAGKSSVGRIVATQLGIPFIDSDHEIER-VSRMT 64
Query: 101 VAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVP 159
+ E+F YGE FR ET V+++L VVSTGGGA R+++K G+SVWL
Sbjct: 65 IPELFAAYGEVEFRALETRVVKRLLKSGPRVVSTGGGAFINDRTRRHIKKGGLSVWLKAD 124
Query: 160 LEALAQRIAAVGTDSRPLL 178
L+ L R+A D+RPLL
Sbjct: 125 LDVLWDRVAK--RDTRPLL 141
>gi|403051714|ref|ZP_10906198.1| shikimate kinase [Acinetobacter bereziniae LMG 1003]
gi|445427018|ref|ZP_21437739.1| shikimate kinase [Acinetobacter sp. WC-743]
gi|444752120|gb|ELW76811.1| shikimate kinase [Acinetobacter sp. WC-743]
Length = 180
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 80/125 (64%), Gaps = 5/125 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G S+ IF+ GE FR +ET
Sbjct: 12 IYLVGPMGAGKTTVGRHLAELLGRDFLDSDHEIERKT-GASIPWIFEKEGEQGFRTRETI 70
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ L+ + LVV+TGGGAVT+ +N Y++ +GI ++L P+E Q + +RPLL
Sbjct: 71 VIDDLTSKKNLVVATGGGAVTQAMNREYLKHRGIVIYLYTPVE--IQLLRTHRDKNRPLL 128
Query: 179 HQCES 183
Q E+
Sbjct: 129 -QVEN 132
>gi|289524053|ref|ZP_06440907.1| shikimate kinase/3-dehydroquinate synthase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289502709|gb|EFD23873.1| shikimate kinase/3-dehydroquinate synthase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 552
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 92/161 (57%), Gaps = 14/161 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+YL G M +GKT+VG+ L+ + G+ F D D L+E ++ G SVAEIF+ YGE +FR E E
Sbjct: 26 LYLGGFMAAGKTSVGRKLAELTGFPFVDTDDLVE-AMAGMSVAEIFQKYGELYFRALEAE 84
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
L++ ++ ++V GGG + P N + G + LD +E + +R A+ RPLL
Sbjct: 85 ALEETFKLKNVIVGLGGGVLVNPENKAKIFANGTLIILDAAIETILKR-ASNEPGKRPLL 143
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 219
+ ++ E +NR R EAY+ A+ RV +++ V
Sbjct: 144 KE----ESVAELMNR-------RREAYSKAHIRVRTDDLFV 173
>gi|299768550|ref|YP_003730576.1| shikimate kinase [Acinetobacter oleivorans DR1]
gi|424744625|ref|ZP_18172916.1| shikimate kinase 1 [Acinetobacter baumannii WC-141]
gi|298698638|gb|ADI89203.1| shikimate kinase [Acinetobacter oleivorans DR1]
gi|422942838|gb|EKU37874.1| shikimate kinase 1 [Acinetobacter baumannii WC-141]
Length = 189
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET
Sbjct: 21 IYLVGPMGAGKTTVGRHLAEILGREFLDSDHEIERKT-GATIPWIFEKEGEFGFRARETI 79
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL +L+ + LV++TGGGA+T+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 80 VLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL 137
Query: 179 H 179
Sbjct: 138 Q 138
>gi|434383184|ref|YP_006704967.1| shikimate kinase [Brachyspira pilosicoli WesB]
gi|404431833|emb|CCG57879.1| shikimate kinase [Brachyspira pilosicoli WesB]
Length = 174
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 89/152 (58%), Gaps = 7/152 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+++G+ GSGK+ + K+L+ + Y+FFD D +IE S + ++ +IF+ GE +FRE E++
Sbjct: 9 IFVIGLPGSGKSDLSKLLAEYINYTFFDMDKVIE-SREKKTINKIFEDRGEEYFREVESD 67
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL++LS ++ VVSTGGGA+ + N M ++GI +++D P E + I RPLL
Sbjct: 68 VLEELSNIKNAVVSTGGGAILKEKNRALMKERGIVIFIDRPAELIVNNI---NVSERPLL 124
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANA 210
Q + E + L+ E + N N
Sbjct: 125 VQ--DKNKLIELSKKRDALYRECAKVIFNHNT 154
>gi|332716416|ref|YP_004443882.1| shikimate kinase [Agrobacterium sp. H13-3]
gi|325063101|gb|ADY66791.1| Shikimate kinase [Agrobacterium sp. H13-3]
Length = 193
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 104/188 (55%), Gaps = 17/188 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L+GR + VG+MG+GK+ +G++++ L SF D D IE+ V ++AE+F YGE FR
Sbjct: 20 LAGRNVVFVGLMGAGKSAIGRMVAQQLKVSFIDTDVEIER-VSRMTIAELFATYGEEEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTD 173
ET V+++L V+STGGGA R++ +G +S+WL +E L +R+ D
Sbjct: 79 ALETRVVKRLLRGGPKVISTGGGAFINDNTRRHITRGSVSLWLKADIEVLWERVNK--RD 136
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
RPLL + E+ A L+ L E+R YA A+ + ++ K++ +T V
Sbjct: 137 HRPLL-KTENPKAT------LAALMEKRYPIYAEADLTIESRDV-----RKEI-IVTEVL 183
Query: 234 IAIEALEQ 241
AI LEQ
Sbjct: 184 GAIAGLEQ 191
>gi|115312157|sp|Q2G733.2|AROK_NOVAD RecName: Full=Shikimate kinase; Short=SK
Length = 193
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 15/157 (9%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
GR + LVGMMG GKTTVG+ L+ +L F D D IE++ + EIF YGE +FR+
Sbjct: 21 GRPLVLVGMMGVGKTTVGRKLASLLHVPFVDADEEIERAAH-MPIPEIFATYGEPYFRDG 79
Query: 117 ETEVLQKL----SLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVG 171
E V+ +L + V+STGGGA P +++GI+VWLD ++ L +R+
Sbjct: 80 ERRVIARLMGTGRNTDRKVLSTGGGAFCDPATRALILERGIAVWLDSDVDTLVERVGR-- 137
Query: 172 TDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
D+RPLL ++G+ E L RL +ER YA A
Sbjct: 138 KDNRPLL---KTGNPR-EILTRLK---DEREPFYAQA 167
>gi|404474947|ref|YP_006706378.1| shikimate kinase [Brachyspira pilosicoli B2904]
gi|404436436|gb|AFR69630.1| shikimate kinase [Brachyspira pilosicoli B2904]
Length = 147
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 82/124 (66%), Gaps = 5/124 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I+++G+ GSGK+ + K+L+ + Y+FFD D +IE S + ++ +IF+ GE +FRE E
Sbjct: 7 KTIFVIGLPGSGKSDLSKLLAEYIDYTFFDMDKVIE-SREKKTINKIFEDSGEEYFREVE 65
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
++VL++LS ++ V+STGGGA+ + N M ++GI +++D P E + I +RP
Sbjct: 66 SDVLEELSNIKNAVISTGGGAILKEKNRVLMKERGIVIFIDRPAELIVNNI---NVSARP 122
Query: 177 LLHQ 180
LL Q
Sbjct: 123 LLVQ 126
>gi|392408287|ref|YP_006444895.1| 3-dehydroquinate synthase, shikimate kinase [Anaerobaculum mobile
DSM 13181]
gi|390621423|gb|AFM22570.1| 3-dehydroquinate synthase, shikimate kinase [Anaerobaculum mobile
DSM 13181]
Length = 555
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 91/171 (53%), Gaps = 16/171 (9%)
Query: 52 EPYLSGRC--IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYG 109
+P L G +YL G M +GKT+VG LS + G F D D LIE ++ G S+AEIF G
Sbjct: 17 KPDLKGTSFRLYLGGFMAAGKTSVGSKLSELTGLPFLDTDDLIE-AMAGMSIAEIFATCG 75
Query: 110 EGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIA 168
EG FRE E VL + ++ ++V GGG + P N + M G + LD + + +R A
Sbjct: 76 EGHFRELERRVLDETFKLKNVIVGLGGGVLVNPENKAKIMANGTLIMLDAAVNTIIKR-A 134
Query: 169 AVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 219
+ RPLL + D E LN+ R +AY +A+ RVS + I V
Sbjct: 135 SNQPGKRPLLRE----DNVAELLNK-------RRDAYKDAHFRVSTDEILV 174
>gi|392409698|ref|YP_006446305.1| 3-dehydroquinate synthase, shikimate kinase [Desulfomonile tiedjei
DSM 6799]
gi|390622834|gb|AFM24041.1| 3-dehydroquinate synthase, shikimate kinase [Desulfomonile tiedjei
DSM 6799]
Length = 532
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 82/149 (55%), Gaps = 11/149 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L G MG+GK+ VGK L+ +LG +F D DT+IEQ G SVA IF GE FR E E
Sbjct: 11 IILTGFMGTGKSVVGKRLAALLGRNFLDTDTIIEQG-SGKSVAAIFSQEGEQCFRGYEKE 69
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
V ++LS R V++TGGG + P N + + + GI + LD + + R RPLL
Sbjct: 70 VCRELSETRGFVIATGGGMLLDPENRKLLSRNGIIIRLDASIPTILHRTQR--HQHRPLL 127
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYAN 207
+ CE + R+ +L R AYA+
Sbjct: 128 N-CEDSE------QRIKSLLAGRSAAYAS 149
>gi|400754280|ref|YP_006562648.1| shikimate kinase AroK [Phaeobacter gallaeciensis 2.10]
gi|398653433|gb|AFO87403.1| shikimate kinase AroK [Phaeobacter gallaeciensis 2.10]
Length = 196
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 94/172 (54%), Gaps = 11/172 (6%)
Query: 39 DEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDG 98
++ Q L P + I +VGMMG+GKT VG+ L+ L F D D IE + +
Sbjct: 3 EKEQTLSGAGDRRVPGALKKTIVMVGMMGAGKTAVGRALAARLQAPFLDSDHEIEAAANR 62
Query: 99 TSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLD 157
T + EIF GE FFR+KE +V+++L + V+STGGGA N + + ++G+++WL+
Sbjct: 63 T-IPEIFARDGELFFRKKERQVIRRLLDEERGVLSTGGGAFLAEENRQIISERGVAIWLN 121
Query: 158 VPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LE L R+ D+RPLL + E A LS L+ +R YA A+
Sbjct: 122 ADLEVLWNRVKH--RDTRPLL-RTEDPHAT------LSALYHDRVPYYAQAD 164
>gi|338214778|ref|YP_004658841.1| shikimate kinase [Runella slithyformis DSM 19594]
gi|336308607|gb|AEI51709.1| Shikimate kinase [Runella slithyformis DSM 19594]
Length = 171
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I+LVG+ SGKTT+GK L+ L Y F D D LI + +G S+ IF GE +FRE E
Sbjct: 2 KNIFLVGLPSSGKTTLGKQLARQLRYRFVDTDVLIVKE-EGMSINAIFAQKGEPYFREAE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+L+ + +L+V+TGGG N Y+++ GISV+LDV E + RI ++ RP
Sbjct: 61 ARILRAIRPDSKLIVATGGGVPYFHDNMAYIKENGISVFLDVAPEEIVDRIQRHSSNDRP 120
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 220
+ + T+ L L + +R Y+ A+ + E++ ++
Sbjct: 121 TYQKQD-----TQLLENLQQRYRDRFPFYSQADFTLKGESLNIR 159
>gi|337748176|ref|YP_004642338.1| shikimate kinase [Paenibacillus mucilaginosus KNP414]
gi|379723033|ref|YP_005315164.1| shikimate kinase [Paenibacillus mucilaginosus 3016]
gi|386725823|ref|YP_006192149.1| shikimate kinase [Paenibacillus mucilaginosus K02]
gi|336299365|gb|AEI42468.1| shikimate kinase [Paenibacillus mucilaginosus KNP414]
gi|378571705|gb|AFC32015.1| shikimate kinase [Paenibacillus mucilaginosus 3016]
gi|384092948|gb|AFH64384.1| shikimate kinase [Paenibacillus mucilaginosus K02]
Length = 170
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 92/165 (55%), Gaps = 14/165 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I L+GMMG+GK+TVG+ L+ LG+ F D D +IE++ G ++ E+F GE FFRE E
Sbjct: 4 RNIVLIGMMGTGKSTVGQALAARLGWRFVDTDAVIERNT-GKTIPELFAGEGEAFFREAE 62
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDS-R 175
E + + VV+TGGGAV R N R M + G+ V L E + +R V TDS R
Sbjct: 63 REAVAAVLKESGQVVATGGGAVLREENRRAMSEGGLVVALLCSPERIIER---VRTDSNR 119
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 220
PLL G+ R+ TL E R EAY A+ V + V+
Sbjct: 120 PLLQ----GNLE----ERVHTLAENRREAYTFADLAVDTSELDVQ 156
>gi|429768911|ref|ZP_19301039.1| shikimate kinase [Brevundimonas diminuta 470-4]
gi|429188262|gb|EKY29150.1| shikimate kinase [Brevundimonas diminuta 470-4]
Length = 189
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 4/128 (3%)
Query: 53 PYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGF 112
P S R I LVG+MG GK+TVG+ L+ LG F D D +IE++ G +V+EIF GE
Sbjct: 11 PLSSVRTIALVGLMGVGKSTVGRRLAQRLGLPFADGDQVIEEAA-GMTVSEIFASRGEAE 69
Query: 113 FREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVG 171
FR E V+++L +V++TGGGAV P M Q +SVW+ L+ +A+R+
Sbjct: 70 FRAGEARVMRRLLEGPPIVLATGGGAVLNPDTRALMKQHAVSVWMRADLKVIAERVGR-- 127
Query: 172 TDSRPLLH 179
D+RPLL
Sbjct: 128 RDTRPLLR 135
>gi|254447343|ref|ZP_05060809.1| shikimate kinase [gamma proteobacterium HTCC5015]
gi|198262686|gb|EDY86965.1| shikimate kinase [gamma proteobacterium HTCC5015]
Length = 174
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 94/160 (58%), Gaps = 14/160 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++LVG MG+GKTT+G++L+ LG F D D IE+ G ++ IF+ GE FR++E +
Sbjct: 5 LFLVGPMGAGKTTIGRLLAKQLGLCFVDSDHAIEEKT-GVNIPTIFEYEGESGFRQREAQ 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD-SRPL 177
++ +LS + +V++TGGGAVT P N ++ +G ++L V ++ ++I G D +RPL
Sbjct: 64 IIDELSQQKNIVLATGGGAVTTPQNCTHLAARGTVIYLTVSVD---EQIKRAGKDKNRPL 120
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYAN-ANARVSLEN 216
+ D E L ++ ERG Y + A+ R +N
Sbjct: 121 MQ----SDNPRETLTHMA---RERGPLYESVADYRFDTDN 153
>gi|149278995|ref|ZP_01885129.1| putative shikimate kinase [Pedobacter sp. BAL39]
gi|149230274|gb|EDM35659.1| putative shikimate kinase [Pedobacter sp. BAL39]
Length = 168
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L+G MG GK+T+GK L+ +GY F D D IE+ + G+++A F +GE FR +E++
Sbjct: 3 IFLIGFMGCGKSTLGKKLASRMGYEFIDLDHQIEKEI-GSTIANYFSAHGEAVFRSQESK 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
L++ VV+TGGG N ++ GIS+++++P LAQR+ + G D RPLL
Sbjct: 62 TLKEFDYPENCVVATGGGTPCFFDNMDWINNNGISIYIELPPVVLAQRLES-GKDKRPLL 120
Query: 179 HQCESGDA 186
GDA
Sbjct: 121 RDLH-GDA 127
>gi|402823428|ref|ZP_10872854.1| shikimate kinase [Sphingomonas sp. LH128]
gi|402263070|gb|EJU13007.1| shikimate kinase [Sphingomonas sp. LH128]
Length = 194
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I LVGMMG GK++VGK L+ +L F D D IE+S S+ EIF YGE +FR+ E
Sbjct: 22 RPIVLVGMMGVGKSSVGKRLANLLDCPFVDADDEIERSAQ-MSIPEIFDAYGEDYFRDGE 80
Query: 118 TEVLQKL-----SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVG 171
V+ +L + +++V++TGGGA V + K I++WLD ++ L +R A
Sbjct: 81 RRVIARLITDSETRRQRIVIATGGGAFVNAETRALILDKAITIWLDSEVDTLVERTAR-- 138
Query: 172 TDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
++RPLL G E L RL EER + Y A V
Sbjct: 139 KENRPLLR----GGNPREILGRLR---EERAQHYCQAPIHV 172
>gi|435853275|ref|YP_007314594.1| shikimate kinase [Halobacteroides halobius DSM 5150]
gi|433669686|gb|AGB40501.1| shikimate kinase [Halobacteroides halobius DSM 5150]
Length = 170
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 79/147 (53%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MG+GKTTVGK L+ L Y F D D I + DG + EIF GE +FR+ ET
Sbjct: 3 IALIGFMGTGKTTVGKKLASRLNYKFVDLDQEI-VAEDGREICEIFAQAGEDYFRDLETR 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
V K++ + V++TGGG V R N + ++K G V L E + +R + D RPLL
Sbjct: 62 VTAKIAQKDKQVIATGGGVVLREENIKNLKKNGFLVLLQATPEEILERTKS--DDDRPLL 119
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
E L ++ + EER E Y
Sbjct: 120 D-------VEEPLAKIKKMLEERAEKY 139
>gi|110639599|ref|YP_679809.1| shikimate kinase [Cytophaga hutchinsonii ATCC 33406]
gi|110282280|gb|ABG60466.1| shikimate kinase [Cytophaga hutchinsonii ATCC 33406]
Length = 172
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 84/150 (56%), Gaps = 6/150 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL+G+ GSGK+T+GK L+ L Y+FFD D I + + ++ EIF GE +FRE E
Sbjct: 3 IYLIGLPGSGKSTIGKTLAQKLKYTFFDMDDAI-CAQEKKTIEEIFADKGENYFRELEHS 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L ++ ++STGGG N M+K G++++++ + LA R+ G +RP+L
Sbjct: 62 ILHDTFELKNAIISTGGGVPCYFDNITEMKKHGLTIFINPSADELANRLVGQGGQNRPML 121
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANA 208
G + + L+ + T + ER Y A
Sbjct: 122 ----KGKTHKQVLDFIETKYRERAPYYEQA 147
>gi|452963625|gb|EME68687.1| shikimate kinase [Magnetospirillum sp. SO-1]
Length = 191
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 11/154 (7%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
GR + LVG+MG+GK+ VG+ L+ LG F D D E + G+S+++ F +GE FR+
Sbjct: 17 GRTVVLVGLMGAGKSCVGRRLAARLGLDFLDSDVEFE-AASGSSISDYFARFGEAAFRDG 75
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAAVGTDSR 175
E +V+ +L +V++TGGGA P R G SVW+ L+ L +R VG D R
Sbjct: 76 ERKVIARLLDGPPVVLATGGGAFIDPATRERIKSTGTSVWIRAELDLLLKR--TVGRDHR 133
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
PLL Q + E L R L E R YA A+
Sbjct: 134 PLLKQGDP----REILGR---LMEARYPVYAEAD 160
>gi|293610713|ref|ZP_06693013.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375136274|ref|YP_004996924.1| shikimate-kinase [Acinetobacter calcoaceticus PHEA-2]
gi|427424099|ref|ZP_18914236.1| shikimate kinase 1 [Acinetobacter baumannii WC-136]
gi|292827057|gb|EFF85422.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123719|gb|ADY83242.1| shikimate-kinase [Acinetobacter calcoaceticus PHEA-2]
gi|425699207|gb|EKU68826.1| shikimate kinase 1 [Acinetobacter baumannii WC-136]
Length = 189
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET
Sbjct: 21 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEFGFRTRETV 79
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL +L+ + LV++TGGGA+T+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 80 VLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL 137
Query: 179 H 179
Sbjct: 138 Q 138
>gi|16127238|ref|NP_421802.1| shikimate kinase [Caulobacter crescentus CB15]
gi|221236039|ref|YP_002518476.1| shikimate kinase [Caulobacter crescentus NA1000]
gi|81534559|sp|Q9A435.1|AROK_CAUCR RecName: Full=Shikimate kinase; Short=SK
gi|254806772|sp|B8H331.1|AROK_CAUCN RecName: Full=Shikimate kinase; Short=SK
gi|13424646|gb|AAK24970.1| shikimate kinase [Caulobacter crescentus CB15]
gi|220965212|gb|ACL96568.1| shikimate kinase [Caulobacter crescentus NA1000]
Length = 200
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 102/205 (49%), Gaps = 25/205 (12%)
Query: 36 APIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQS 95
AP +V S ++ P L + I LVG+MG GK++VG+ L+ VLG F D D +E +
Sbjct: 11 APEAAPEVAPIVSDDLAP-LRAKTIVLVGLMGVGKSSVGRRLANVLGLPFRDADNEVEAA 69
Query: 96 VDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISV 154
G S++EIF GE FR+ E V+ +L V++TGGGA V +K +SV
Sbjct: 70 A-GRSISEIFAELGEPAFRDGERRVIARLLDEPPHVLATGGGAFVNAETRALINEKAVSV 128
Query: 155 WLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
WL +E LA+R++ D+RPL+ + TE L E R AYA A V
Sbjct: 129 WLKADVELLARRVSR--KDNRPLVRGKDPVKVLTE-------LAEARYPAYAEAQVHVET 179
Query: 215 ENIAVKLGHKDVSSLTPVTIAIEAL 239
+ TP +A+EA+
Sbjct: 180 GD-------------TPHMVAVEAI 191
>gi|169632251|ref|YP_001705987.1| shikimate kinase [Acinetobacter baumannii SDF]
gi|169794486|ref|YP_001712279.1| shikimate kinase [Acinetobacter baumannii AYE]
gi|238688068|sp|B0V8M8.1|AROK_ACIBY RecName: Full=Shikimate kinase; Short=SK
gi|238688154|sp|B0VQ33.1|AROK_ACIBS RecName: Full=Shikimate kinase; Short=SK
gi|169147413|emb|CAM85274.1| shikimate-kinase [Acinetobacter baumannii AYE]
gi|169151043|emb|CAO99696.1| shikimate-kinase [Acinetobacter baumannii]
Length = 180
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET
Sbjct: 12 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEVGFRTRETV 70
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL +L+ + LV++TGGGA+T+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 71 VLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL 128
Query: 179 H 179
Sbjct: 129 Q 129
>gi|421662947|ref|ZP_16103101.1| shikimate kinase 1 [Acinetobacter baumannii OIFC110]
gi|421693675|ref|ZP_16133308.1| shikimate kinase 1 [Acinetobacter baumannii WC-692]
gi|404570312|gb|EKA75389.1| shikimate kinase 1 [Acinetobacter baumannii WC-692]
gi|408713975|gb|EKL59130.1| shikimate kinase 1 [Acinetobacter baumannii OIFC110]
Length = 189
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET
Sbjct: 21 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEVGFRTRETV 79
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL +L+ + LV++TGGGA+T+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 80 VLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL 137
Query: 179 H 179
Sbjct: 138 Q 138
>gi|390935043|ref|YP_006392548.1| shikimate kinase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570544|gb|AFK86949.1| Shikimate kinase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 171
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 11/163 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I L G M +GKT VGK ++ +L +SF D D LIE+ + G + EIF YGE +FR E
Sbjct: 2 KNIALTGFMATGKTVVGKRVADILSFSFIDTDDLIEK-ISGMKIPEIFDKYGEKYFRGIE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+ + S ++ V+STGGG V P N ++K G+ + L E + + I D RP
Sbjct: 61 KIAVARASRLKNHVISTGGGVVLNPSNIVQLRKHGVVICLKANPEVILRNIG--DNDKRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 219
+L +GD Y ++ L ER Y A+ + + N+++
Sbjct: 119 IL---ATGDVY----EKIKALLAERQHYYEFADYTIDVSNMSI 154
>gi|300113066|ref|YP_003759641.1| shikimate kinase [Nitrosococcus watsonii C-113]
gi|299539003|gb|ADJ27320.1| Shikimate kinase [Nitrosococcus watsonii C-113]
Length = 189
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 104/187 (55%), Gaps = 22/187 (11%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVG MGSGKTT+G+ L+ + G F+D D IE S G S+ IF++ GE FR++E +
Sbjct: 6 IFLVGPMGSGKTTIGRYLARITGKKFYDSDREIE-SRTGVSIPVIFEIEGESGFRQRECK 64
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ +L + +V++TGGGAV N R + Q+G V+L L +R + ++RPLL
Sbjct: 65 IIAELVQLSNIVLATGGGAVLAAENRRELSQRGTVVYLYASPRQLYRRTSH--DNNRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
Q E + L RL +L +ER Y + ++ +K G + V + +A E
Sbjct: 123 -QTE------KPLERLKSLLKERDPLYR------EVADVIIKTGKQPVKA-----VANEV 164
Query: 239 LEQIEGF 245
L Q++ +
Sbjct: 165 LRQLKRY 171
>gi|226953743|ref|ZP_03824207.1| shikimate-kinase [Acinetobacter sp. ATCC 27244]
gi|294651770|ref|ZP_06729068.1| shikimate kinase [Acinetobacter haemolyticus ATCC 19194]
gi|226835475|gb|EEH67858.1| shikimate-kinase [Acinetobacter sp. ATCC 27244]
gi|292822327|gb|EFF81232.1| shikimate kinase [Acinetobacter haemolyticus ATCC 19194]
Length = 183
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 83/147 (56%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET
Sbjct: 15 IYLVGPMGAGKTTVGRHLAELLGRDFMDSDHEIERKT-GATIPWIFEKEGEVGFRLRETN 73
Query: 120 VLQKLSLMRQLVVSTGGGAVT-RPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL L+ LV++TGGGAVT RP Q+GI V+L P+E QR +RPLL
Sbjct: 74 VLNDLTARSSLVLATGGGAVTQRPNRELLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL 131
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
Q E+ + +L L E R Y
Sbjct: 132 -QVENPE------QKLRDLLETRDPLY 151
>gi|452751532|ref|ZP_21951277.1| Shikimate kinase I [alpha proteobacterium JLT2015]
gi|451960751|gb|EMD83162.1| Shikimate kinase I [alpha proteobacterium JLT2015]
Length = 189
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 24/181 (13%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I LVG+MG+GK+T+G+ L+ L F D D IE + G SV+EIF +GE FR+ E
Sbjct: 22 IMLVGLMGAGKSTIGRRLARRLSLPFVDADEEIEAAA-GLSVSEIFARFGEAHFRDGERR 80
Query: 120 VLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ +L R+ V++TGGGA V + GI++W+D +E L +R++ D+RPLL
Sbjct: 81 VIARLMEGRRQVIATGGGAFVDDETRAAMLASGITIWVDADIEVLIERVSR--RDTRPLL 138
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
+ G + L + R YA A+ V +SS P A+EA
Sbjct: 139 AGQDRGAV-------MRALAKARAPRYAEAHFHV-------------MSSPAPPQEAVEA 178
Query: 239 L 239
+
Sbjct: 179 I 179
>gi|184159707|ref|YP_001848046.1| shikimate kinase [Acinetobacter baumannii ACICU]
gi|213158942|ref|YP_002320940.1| shikimate kinase [Acinetobacter baumannii AB0057]
gi|215482075|ref|YP_002324257.1| Shikimate kinase(SK) [Acinetobacter baumannii AB307-0294]
gi|239501962|ref|ZP_04661272.1| shikimate kinase [Acinetobacter baumannii AB900]
gi|260556919|ref|ZP_05829136.1| shikimate kinase [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|301345423|ref|ZP_07226164.1| shikimate kinase [Acinetobacter baumannii AB056]
gi|301510069|ref|ZP_07235306.1| shikimate kinase [Acinetobacter baumannii AB058]
gi|301595995|ref|ZP_07241003.1| shikimate kinase [Acinetobacter baumannii AB059]
gi|332851352|ref|ZP_08433404.1| shikimate kinase [Acinetobacter baumannii 6013150]
gi|332868763|ref|ZP_08438386.1| shikimate kinase [Acinetobacter baumannii 6013113]
gi|332873778|ref|ZP_08441720.1| shikimate kinase [Acinetobacter baumannii 6014059]
gi|384133400|ref|YP_005516012.1| aroK [Acinetobacter baumannii 1656-2]
gi|384144820|ref|YP_005527530.1| shikimate kinase [Acinetobacter baumannii MDR-ZJ06]
gi|385239137|ref|YP_005800476.1| shikimate kinase [Acinetobacter baumannii TCDC-AB0715]
gi|387122376|ref|YP_006288258.1| shikimate kinase [Acinetobacter baumannii MDR-TJ]
gi|403673593|ref|ZP_10935888.1| shikimate kinase [Acinetobacter sp. NCTC 10304]
gi|407934291|ref|YP_006849934.1| aroK [Acinetobacter baumannii TYTH-1]
gi|416148880|ref|ZP_11602575.1| shikimate kinase [Acinetobacter baumannii AB210]
gi|417545669|ref|ZP_12196755.1| shikimate kinase 1 [Acinetobacter baumannii OIFC032]
gi|417550760|ref|ZP_12201839.1| shikimate kinase 1 [Acinetobacter baumannii Naval-18]
gi|417553726|ref|ZP_12204795.1| shikimate kinase 1 [Acinetobacter baumannii Naval-81]
gi|417563185|ref|ZP_12214064.1| shikimate kinase 1 [Acinetobacter baumannii OIFC137]
gi|417565637|ref|ZP_12216511.1| shikimate kinase 1 [Acinetobacter baumannii OIFC143]
gi|417571363|ref|ZP_12222220.1| shikimate kinase 1 [Acinetobacter baumannii OIFC189]
gi|417572573|ref|ZP_12223427.1| shikimate kinase 1 [Acinetobacter baumannii Canada BC-5]
gi|417576402|ref|ZP_12227247.1| shikimate kinase [Acinetobacter baumannii Naval-17]
gi|417872116|ref|ZP_12517026.1| shikimate kinase [Acinetobacter baumannii ABNIH1]
gi|417875224|ref|ZP_12520044.1| shikimate kinase [Acinetobacter baumannii ABNIH2]
gi|417880220|ref|ZP_12524754.1| shikimate kinase [Acinetobacter baumannii ABNIH3]
gi|417881175|ref|ZP_12525524.1| shikimate kinase [Acinetobacter baumannii ABNIH4]
gi|421199457|ref|ZP_15656618.1| shikimate kinase 1 [Acinetobacter baumannii OIFC109]
gi|421202134|ref|ZP_15659286.1| shikimate kinase [Acinetobacter baumannii AC12]
gi|421455549|ref|ZP_15904893.1| shikimate kinase 1 [Acinetobacter baumannii IS-123]
gi|421535131|ref|ZP_15981395.1| shikimate kinase [Acinetobacter baumannii AC30]
gi|421620977|ref|ZP_16061905.1| shikimate kinase 1 [Acinetobacter baumannii OIFC074]
gi|421624270|ref|ZP_16065143.1| shikimate kinase 1 [Acinetobacter baumannii OIFC098]
gi|421628736|ref|ZP_16069502.1| shikimate kinase 1 [Acinetobacter baumannii OIFC180]
gi|421635296|ref|ZP_16075899.1| shikimate kinase 1 [Acinetobacter baumannii Naval-13]
gi|421641841|ref|ZP_16082372.1| shikimate kinase 1 [Acinetobacter baumannii IS-235]
gi|421647641|ref|ZP_16088052.1| shikimate kinase 1 [Acinetobacter baumannii IS-251]
gi|421649909|ref|ZP_16090291.1| shikimate kinase 1 [Acinetobacter baumannii OIFC0162]
gi|421654478|ref|ZP_16094805.1| shikimate kinase 1 [Acinetobacter baumannii Naval-72]
gi|421659713|ref|ZP_16099929.1| shikimate kinase 1 [Acinetobacter baumannii Naval-83]
gi|421668116|ref|ZP_16108156.1| shikimate kinase 1 [Acinetobacter baumannii OIFC087]
gi|421668998|ref|ZP_16109026.1| shikimate kinase 1 [Acinetobacter baumannii OIFC099]
gi|421673803|ref|ZP_16113740.1| shikimate kinase 1 [Acinetobacter baumannii OIFC065]
gi|421680373|ref|ZP_16120228.1| shikimate kinase 1 [Acinetobacter baumannii OIFC111]
gi|421688643|ref|ZP_16128341.1| shikimate kinase 1 [Acinetobacter baumannii IS-143]
gi|421690289|ref|ZP_16129960.1| shikimate kinase 1 [Acinetobacter baumannii IS-116]
gi|421698226|ref|ZP_16137768.1| shikimate kinase 1 [Acinetobacter baumannii IS-58]
gi|421704968|ref|ZP_16144409.1| shikimate kinase [Acinetobacter baumannii ZWS1122]
gi|421708747|ref|ZP_16148120.1| shikimate kinase [Acinetobacter baumannii ZWS1219]
gi|421788911|ref|ZP_16225179.1| shikimate kinase 1 [Acinetobacter baumannii Naval-82]
gi|421791063|ref|ZP_16227251.1| shikimate kinase 1 [Acinetobacter baumannii Naval-2]
gi|421797138|ref|ZP_16233186.1| shikimate kinase 1 [Acinetobacter baumannii Naval-21]
gi|421800233|ref|ZP_16236212.1| shikimate kinase 1 [Acinetobacter baumannii Canada BC1]
gi|421803744|ref|ZP_16239656.1| shikimate kinase 1 [Acinetobacter baumannii WC-A-694]
gi|421807149|ref|ZP_16243010.1| shikimate kinase 1 [Acinetobacter baumannii OIFC035]
gi|424050748|ref|ZP_17788284.1| shikimate kinase [Acinetobacter baumannii Ab11111]
gi|424058446|ref|ZP_17795943.1| shikimate kinase [Acinetobacter baumannii Ab33333]
gi|424061917|ref|ZP_17799404.1| shikimate kinase [Acinetobacter baumannii Ab44444]
gi|425748421|ref|ZP_18866408.1| shikimate kinase 1 [Acinetobacter baumannii WC-348]
gi|425753994|ref|ZP_18871861.1| shikimate kinase 1 [Acinetobacter baumannii Naval-113]
gi|445410553|ref|ZP_21432869.1| shikimate kinase 1 [Acinetobacter baumannii Naval-57]
gi|445442409|ref|ZP_21442356.1| shikimate kinase 1 [Acinetobacter baumannii WC-A-92]
gi|445460931|ref|ZP_21448530.1| shikimate kinase 1 [Acinetobacter baumannii OIFC047]
gi|445470590|ref|ZP_21451522.1| shikimate kinase 1 [Acinetobacter baumannii OIFC338]
gi|445478755|ref|ZP_21454878.1| shikimate kinase 1 [Acinetobacter baumannii Naval-78]
gi|445489960|ref|ZP_21458968.1| shikimate kinase 1 [Acinetobacter baumannii AA-014]
gi|183211301|gb|ACC58699.1| Shikimate kinase [Acinetobacter baumannii ACICU]
gi|193078560|gb|ABO13583.2| shikimate-kinase [Acinetobacter baumannii ATCC 17978]
gi|213058102|gb|ACJ43004.1| shikimate kinase [Acinetobacter baumannii AB0057]
gi|213986290|gb|ACJ56589.1| Shikimate kinase(SK) [Acinetobacter baumannii AB307-0294]
gi|260409525|gb|EEX02826.1| shikimate kinase [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|322509620|gb|ADX05074.1| aroK [Acinetobacter baumannii 1656-2]
gi|323519638|gb|ADX94019.1| shikimate kinase [Acinetobacter baumannii TCDC-AB0715]
gi|332730068|gb|EGJ61396.1| shikimate kinase [Acinetobacter baumannii 6013150]
gi|332733192|gb|EGJ64389.1| shikimate kinase [Acinetobacter baumannii 6013113]
gi|332738001|gb|EGJ68886.1| shikimate kinase [Acinetobacter baumannii 6014059]
gi|333364707|gb|EGK46721.1| shikimate kinase [Acinetobacter baumannii AB210]
gi|342223805|gb|EGT88888.1| shikimate kinase [Acinetobacter baumannii ABNIH1]
gi|342225651|gb|EGT90639.1| shikimate kinase [Acinetobacter baumannii ABNIH3]
gi|342226505|gb|EGT91473.1| shikimate kinase [Acinetobacter baumannii ABNIH2]
gi|342239134|gb|EGU03547.1| shikimate kinase [Acinetobacter baumannii ABNIH4]
gi|347595313|gb|AEP08034.1| shikimate kinase [Acinetobacter baumannii MDR-ZJ06]
gi|385876868|gb|AFI93963.1| shikimate kinase [Acinetobacter baumannii MDR-TJ]
gi|395525767|gb|EJG13856.1| shikimate kinase 1 [Acinetobacter baumannii OIFC137]
gi|395551811|gb|EJG17820.1| shikimate kinase 1 [Acinetobacter baumannii OIFC189]
gi|395557393|gb|EJG23394.1| shikimate kinase 1 [Acinetobacter baumannii OIFC143]
gi|395564454|gb|EJG26105.1| shikimate kinase 1 [Acinetobacter baumannii OIFC109]
gi|395569623|gb|EJG30285.1| shikimate kinase [Acinetobacter baumannii Naval-17]
gi|398328440|gb|EJN44566.1| shikimate kinase [Acinetobacter baumannii AC12]
gi|400208141|gb|EJO39111.1| shikimate kinase 1 [Acinetobacter baumannii Canada BC-5]
gi|400211787|gb|EJO42749.1| shikimate kinase 1 [Acinetobacter baumannii IS-123]
gi|400383557|gb|EJP42235.1| shikimate kinase 1 [Acinetobacter baumannii OIFC032]
gi|400386585|gb|EJP49659.1| shikimate kinase 1 [Acinetobacter baumannii Naval-18]
gi|400390143|gb|EJP57190.1| shikimate kinase 1 [Acinetobacter baumannii Naval-81]
gi|404560400|gb|EKA65643.1| shikimate kinase 1 [Acinetobacter baumannii IS-143]
gi|404564561|gb|EKA69740.1| shikimate kinase 1 [Acinetobacter baumannii IS-116]
gi|404572526|gb|EKA77568.1| shikimate kinase 1 [Acinetobacter baumannii IS-58]
gi|404665688|gb|EKB33650.1| shikimate kinase [Acinetobacter baumannii Ab33333]
gi|404669501|gb|EKB37394.1| shikimate kinase [Acinetobacter baumannii Ab11111]
gi|404674329|gb|EKB42077.1| shikimate kinase [Acinetobacter baumannii Ab44444]
gi|407189061|gb|EKE60289.1| shikimate kinase [Acinetobacter baumannii ZWS1122]
gi|407189475|gb|EKE60701.1| shikimate kinase [Acinetobacter baumannii ZWS1219]
gi|407902872|gb|AFU39703.1| aroK [Acinetobacter baumannii TYTH-1]
gi|408510249|gb|EKK11911.1| shikimate kinase 1 [Acinetobacter baumannii Naval-72]
gi|408512308|gb|EKK13953.1| shikimate kinase 1 [Acinetobacter baumannii OIFC0162]
gi|408514593|gb|EKK16199.1| shikimate kinase 1 [Acinetobacter baumannii IS-235]
gi|408515835|gb|EKK17414.1| shikimate kinase 1 [Acinetobacter baumannii IS-251]
gi|408699837|gb|EKL45312.1| shikimate kinase 1 [Acinetobacter baumannii OIFC074]
gi|408701838|gb|EKL47260.1| shikimate kinase 1 [Acinetobacter baumannii OIFC098]
gi|408702848|gb|EKL48256.1| shikimate kinase 1 [Acinetobacter baumannii Naval-13]
gi|408705727|gb|EKL51061.1| shikimate kinase 1 [Acinetobacter baumannii OIFC180]
gi|408707046|gb|EKL52340.1| shikimate kinase 1 [Acinetobacter baumannii Naval-83]
gi|409987011|gb|EKO43200.1| shikimate kinase [Acinetobacter baumannii AC30]
gi|410380554|gb|EKP33134.1| shikimate kinase 1 [Acinetobacter baumannii OIFC087]
gi|410386021|gb|EKP38505.1| shikimate kinase 1 [Acinetobacter baumannii OIFC065]
gi|410389125|gb|EKP41540.1| shikimate kinase 1 [Acinetobacter baumannii OIFC099]
gi|410389742|gb|EKP42153.1| shikimate kinase 1 [Acinetobacter baumannii OIFC111]
gi|410397633|gb|EKP49879.1| shikimate kinase 1 [Acinetobacter baumannii Naval-21]
gi|410399797|gb|EKP51978.1| shikimate kinase 1 [Acinetobacter baumannii Naval-82]
gi|410403941|gb|EKP56015.1| shikimate kinase 1 [Acinetobacter baumannii Naval-2]
gi|410408441|gb|EKP60409.1| shikimate kinase 1 [Acinetobacter baumannii Canada BC1]
gi|410412210|gb|EKP64069.1| shikimate kinase 1 [Acinetobacter baumannii WC-A-694]
gi|410416791|gb|EKP68562.1| shikimate kinase 1 [Acinetobacter baumannii OIFC035]
gi|425491302|gb|EKU57587.1| shikimate kinase 1 [Acinetobacter baumannii WC-348]
gi|425497387|gb|EKU63493.1| shikimate kinase 1 [Acinetobacter baumannii Naval-113]
gi|444763929|gb|ELW88263.1| shikimate kinase 1 [Acinetobacter baumannii WC-A-92]
gi|444766402|gb|ELW90677.1| shikimate kinase 1 [Acinetobacter baumannii AA-014]
gi|444772395|gb|ELW96513.1| shikimate kinase 1 [Acinetobacter baumannii OIFC047]
gi|444772544|gb|ELW96659.1| shikimate kinase 1 [Acinetobacter baumannii OIFC338]
gi|444774828|gb|ELW98904.1| shikimate kinase 1 [Acinetobacter baumannii Naval-78]
gi|444779726|gb|ELX03699.1| shikimate kinase 1 [Acinetobacter baumannii Naval-57]
gi|452949415|gb|EME54883.1| shikimate kinase [Acinetobacter baumannii MSP4-16]
Length = 189
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET
Sbjct: 21 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEVGFRTRETV 79
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL +L+ + LV++TGGGA+T+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 80 VLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL 137
Query: 179 H 179
Sbjct: 138 Q 138
>gi|262373635|ref|ZP_06066913.1| shikimate kinase [Acinetobacter junii SH205]
gi|262311388|gb|EEY92474.1| shikimate kinase [Acinetobacter junii SH205]
Length = 186
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET
Sbjct: 18 IYLVGPMGAGKTTVGRHLAELLGRDFIDSDHEIERKT-GATIPWIFEKEGEVGFRLRETN 76
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL L+ LV++TGGGAVT+ N +++ Q+GI V+L P+E QR +RPLL
Sbjct: 77 VLNDLTSRSSLVLATGGGAVTQAENRQFLHQRGIVVYLYTPVELQLQR--TYRDKNRPLL 134
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
Q E+ + +L L E R Y
Sbjct: 135 -QVENPE------KKLRELLEARDPLY 154
>gi|431794372|ref|YP_007221277.1| shikimate kinase [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784598|gb|AGA69881.1| shikimate kinase [Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 195
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 88/155 (56%), Gaps = 13/155 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ LVG MG+GK+TVG+ L+ +LG F D D IE+ + T V+EIF+ +GE FR +E
Sbjct: 25 VILVGFMGTGKSTVGRRLAKLLGRDFIDTDVEIERLTEMT-VSEIFRRHGETRFRSEERL 83
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++++L+ + V++TGGG V P NW+ + Q G+ + L PL+ + +RI + RPLL
Sbjct: 84 LVKRLADQKGYVIATGGGTVLNPDNWQDLAQSGVIIGLYAPLDEIYKRIGY--RNDRPLL 141
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
GD + LW +R Y AN V
Sbjct: 142 R----GDRQV-----VEELWAKRQPIYNQANWTVD 167
>gi|294085480|ref|YP_003552240.1| shikimate kinase [Candidatus Puniceispirillum marinum IMCC1322]
gi|292665055|gb|ADE40156.1| Shikimate kinase [Candidatus Puniceispirillum marinum IMCC1322]
Length = 245
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 90/168 (53%), Gaps = 11/168 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I LVG+MG GK+ VG+ L+ + F D DT IE++ G +VA+IF L GE FRE E
Sbjct: 55 RPIALVGLMGCGKSMVGRNLAAMFQIPFADSDTAIERAA-GVTVADIFDLAGENKFREME 113
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ L V++TGGGA +P ++ K + VWL E L RI V DSRP
Sbjct: 114 YREIEILLGGTPAVIATGGGAFCQPDTASLLRDKALVVWLKAKPETLLSRIGNV--DSRP 171
Query: 177 LLH----QCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 220
LLH Q + + E L RL+ E R Y A+ V+ + ++ +
Sbjct: 172 LLHNKHSQKQGNETPIEILTRLN---EVRTPFYEQAHLHVNTDGLSKR 216
>gi|408675274|ref|YP_006875022.1| Shikimate kinase [Emticicia oligotrophica DSM 17448]
gi|387856898|gb|AFK04995.1| Shikimate kinase [Emticicia oligotrophica DSM 17448]
Length = 172
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 88/154 (57%), Gaps = 7/154 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L+GM SGK+T+G+ ++ LGY F D D IE + +G +AEIF L GE +FR+ E +
Sbjct: 5 IFLIGMPSSGKSTLGRQIAKSLGYEFVDLDLRIEIA-EGKKIAEIFSLNGEEYFRKVENQ 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
L+K+ ++VV+TGGG Y+++ GIS++LDV E L +R+ + RPL
Sbjct: 64 QLKKIIKDSKMVVATGGGTPCYYDGLDYIKENGISIFLDVKPEMLVERMKVSKKNDRPLF 123
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
ES L+ +S + ER Y A+ V
Sbjct: 124 D-LES----KSLLDTISQTYNERLSTYQKADITV 152
>gi|383754855|ref|YP_005433758.1| putative shikimate kinase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381366907|dbj|BAL83735.1| putative shikimate kinase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 176
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 92/178 (51%), Gaps = 20/178 (11%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R + L+G MG+GKT+ GK+L+ LG +F D D IE+ G ++ EIF +GE FR+ E
Sbjct: 2 RNVILIGFMGTGKTSTGKMLAQKLGCAFIDMDVKIEEEA-GMTIPEIFAKFGEDHFRQLE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L R V+STGGG V P N + Q G V L ++ + +R GT RP
Sbjct: 61 HDLAVRLGSRRNAVISTGGGVVKDPANMAALKQGGTVVCLQADVDTVLERTRCRGT--RP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 234
+L + ++GD ++ L ER YA A+ V D S L+P+ +
Sbjct: 119 VLDKEDNGDRR----QAVTKLLAERESLYAQADFAV------------DTSELSPLQV 160
>gi|30249927|ref|NP_841997.1| shikimate kinase [Nitrosomonas europaea ATCC 19718]
gi|75540210|sp|Q82TC0.1|AROK_NITEU RecName: Full=Shikimate kinase; Short=SK
gi|30139034|emb|CAD85891.1| Shikimate kinase [Nitrosomonas europaea ATCC 19718]
Length = 211
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GMMGSGKTTVGK+L+ ++G +F D D I++ G + IF++ GE FR++E+E
Sbjct: 29 IILIGMMGSGKTTVGKLLANLVGKTFIDIDHEIQRRT-GVGIPVIFEIEGEAGFRKRESE 87
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL+ + + +V++TGGGA+ P N + Q G V+L P+ L +R +RPLL
Sbjct: 88 VLRDIVRQQNIVLATGGGAILHPDNRALLRQHGTVVYLCAPVTELRRRTYL--DKNRPLL 145
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
++G+ + +L L+ +R Y
Sbjct: 146 ---QTGNVHA----KLIELFTQRDPLY 165
>gi|334143176|ref|YP_004536332.1| shikimate kinase [Thioalkalimicrobium cyclicum ALM1]
gi|333964087|gb|AEG30853.1| Shikimate kinase [Thioalkalimicrobium cyclicum ALM1]
Length = 175
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
++ + I+LVG MG+GK+TVG+IL+ LGY F D D IE G ++ IF + GE FR
Sbjct: 1 MNKQSIFLVGPMGAGKSTVGRILAEKLGYDFMDSDHEIEART-GVTIPVIFDIEGEAGFR 59
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD 173
+ET V+ ++ LV++TGGGAV N R++ +G V+L L AL QR
Sbjct: 60 ARETTVIDDITQQPGLVLATGGGAVLSAENRRHLAARGFVVYLRSTLPALIQRTK--NDR 117
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
+RPLL Q E+ + E L ERG Y
Sbjct: 118 NRPLL-QTENPETVIE------RLLTERGPLY 142
>gi|260886338|ref|ZP_05897601.1| shikimate kinase [Selenomonas sputigena ATCC 35185]
gi|330839689|ref|YP_004414269.1| Shikimate kinase [Selenomonas sputigena ATCC 35185]
gi|260864057|gb|EEX78557.1| shikimate kinase [Selenomonas sputigena ATCC 35185]
gi|329747453|gb|AEC00810.1| Shikimate kinase [Selenomonas sputigena ATCC 35185]
Length = 176
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 24/191 (12%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G MG+GKT+ G+ L+ LG +F D D +IE+ G S+ EIF GE FR E E
Sbjct: 4 VVLIGFMGTGKTSTGRALAQRLGRAFVDLDRMIEEEA-GRSIPEIFASEGEAAFRALERE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+++ + R LV+STGGG V N +++ G + L ++ + R A VG RP+L
Sbjct: 63 AVRRTAKRRALVISTGGGTVKDAANVALLKENGAIICLTASVDVVLARTAHVG--DRPVL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
++GD ++ L ER E Y A+ V D S L+P+ +
Sbjct: 121 DAKDAGDRRQA----VADLMAERRELYDVADYSV------------DTSDLSPLQV---- 160
Query: 239 LEQIEGFLKEE 249
++ I G+LK E
Sbjct: 161 VDDIAGYLKRE 171
>gi|405380996|ref|ZP_11034829.1| shikimate kinase [Rhizobium sp. CF142]
gi|397322464|gb|EJJ26869.1| shikimate kinase [Rhizobium sp. CF142]
Length = 196
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 84/144 (58%), Gaps = 7/144 (4%)
Query: 37 PIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSV 96
P+ A L+++++ L R + LVG+MG+GK++VG++L+ LG F D D IE+ V
Sbjct: 5 PVSVADSLRDRAR---AALGSRNLILVGLMGAGKSSVGRLLAQQLGVPFIDSDIEIER-V 60
Query: 97 DGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVW 155
++ E+F YGE FR E V+++L VVSTGGGA R+++K G+SVW
Sbjct: 61 SRMTITELFAAYGEEEFRALEARVMKRLLKGGPRVVSTGGGAFINARTRRHIKKGGLSVW 120
Query: 156 LDVPLEALAQRIAAVGTDSRPLLH 179
L L+ L R+ D+RPLL
Sbjct: 121 LKADLDVLWDRVNK--RDTRPLLK 142
>gi|410584241|ref|ZP_11321346.1| 3-dehydroquinate synthase [Thermaerobacter subterraneus DSM 13965]
gi|410505103|gb|EKP94613.1| 3-dehydroquinate synthase [Thermaerobacter subterraneus DSM 13965]
Length = 743
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 4/127 (3%)
Query: 55 LSGRCI--YLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGF 112
++GR + LVGMMG+GKTTVG+ L+ LG++F D D L+EQ+ G +V +F GE
Sbjct: 1 MTGRPLRLVLVGMMGAGKTTVGRALAARLGWAFLDLDDLVEQAA-GRTVGALFAQEGEAG 59
Query: 113 FREKETEVLQKLSLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVG 171
FR +E + L + ++V++TGGG V N + + VWL+ P E LA+R+A
Sbjct: 60 FRRREEQALAWALALERVVIATGGGVVLSEANRAKLAAEPWVVWLEAPPEELARRLAGPE 119
Query: 172 TDSRPLL 178
RPLL
Sbjct: 120 AAGRPLL 126
>gi|262370668|ref|ZP_06063993.1| shikimate kinase [Acinetobacter johnsonii SH046]
gi|381198009|ref|ZP_09905348.1| shikimate kinase [Acinetobacter lwoffii WJ10621]
gi|262314468|gb|EEY95510.1| shikimate kinase [Acinetobacter johnsonii SH046]
Length = 177
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 83/142 (58%), Gaps = 4/142 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET
Sbjct: 12 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGELGFRSRETV 70
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ +L+ LV++TGGGAVT+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 71 VIDELTSRPNLVLATGGGAVTQAPNRAFLKQRGIVVYLYTPVEIQLQR--TYRDKNRPLL 128
Query: 179 HQCESGDAYTEALNRLSTLWEE 200
T+ L+ L+ E
Sbjct: 129 QVENPEQKLTDLLSVRDPLYRE 150
>gi|89895137|ref|YP_518624.1| hypothetical protein DSY2391 [Desulfitobacterium hafniense Y51]
gi|89334585|dbj|BAE84180.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 186
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 87/151 (57%), Gaps = 13/151 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I LVG MG+GK+TVG+ L+ +LG F D D IE+ + T V+EIF+ +GE FR +E
Sbjct: 16 IVLVGFMGTGKSTVGRRLAKLLGREFIDTDLEIERLTEMT-VSEIFRRHGETRFRSEERL 74
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++++L+ + V++TGGG V P NWR + Q G+ + L PL+ + +RI + RPLL
Sbjct: 75 LVKRLAEQKGYVIATGGGTVLNPENWRDLAQSGVIIGLYAPLDEIYKRIGY--RNDRPLL 132
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANAN 209
GD + LW +R Y A+
Sbjct: 133 R----GDRQV-----VEELWAKRQPIYNQAD 154
>gi|294677397|ref|YP_003578012.1| shikimate kinase [Rhodobacter capsulatus SB 1003]
gi|294476217|gb|ADE85605.1| shikimate kinase [Rhodobacter capsulatus SB 1003]
Length = 187
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 80/145 (55%), Gaps = 5/145 (3%)
Query: 50 EIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYG 109
++ P L + I LVGMMG+GKT VG L+ L F D D I ++ SVAEIF+ G
Sbjct: 6 QVHPRLQ-KTIVLVGMMGAGKTAVGTALARALRVPFHDSDEEIVRAAQ-RSVAEIFERDG 63
Query: 110 EGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIA 168
E FFR +E+EV+++L VVSTGGGA N + + G+SVWL LE L R+
Sbjct: 64 EPFFRARESEVIERLLSGTPGVVSTGGGAFLSEANRAMIARLGVSVWLQADLELLWTRVK 123
Query: 169 AVGTDSRPLLHQCESGDAYTEALNR 193
G +RPLL + E + R
Sbjct: 124 --GKTTRPLLRTADPKATLAELIER 146
>gi|402835195|ref|ZP_10883774.1| shikimate kinase [Selenomonas sp. CM52]
gi|402275986|gb|EJU25116.1| shikimate kinase [Selenomonas sp. CM52]
Length = 176
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 24/191 (12%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G MG+GKT+ G+ L+ LG +F D D +IE+ G S+ EIF GE FR E E
Sbjct: 4 VVLIGFMGTGKTSTGRALAQRLGRAFVDLDRMIEEEA-GRSIPEIFASEGEAAFRALERE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+++ + R LV+STGGG V N +++ G + L ++ + R A VG RP+L
Sbjct: 63 AVRRTAKRRALVISTGGGTVKDAANVALLKENGALICLTASVDVVLARTAHVG--DRPVL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
++GD ++ L ER E Y A+ V D S L+P+ +
Sbjct: 121 DAKDAGDRRQA----VADLMAERRELYDVADYSV------------DTSDLSPLQV---- 160
Query: 239 LEQIEGFLKEE 249
++ I G+LK E
Sbjct: 161 VDDIAGYLKRE 171
>gi|209883235|ref|YP_002287092.1| shikimate kinase [Oligotropha carboxidovorans OM5]
gi|337739671|ref|YP_004631399.1| shikimate kinase AroK [Oligotropha carboxidovorans OM5]
gi|386028689|ref|YP_005949464.1| shikimate kinase AroK [Oligotropha carboxidovorans OM4]
gi|209871431|gb|ACI91227.1| shikimate kinase [Oligotropha carboxidovorans OM5]
gi|336093757|gb|AEI01583.1| shikimate kinase AroK [Oligotropha carboxidovorans OM4]
gi|336097335|gb|AEI05158.1| shikimate kinase AroK [Oligotropha carboxidovorans OM5]
Length = 213
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Query: 43 VLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVA 102
V++N++ +I L R I LVGMMGSGK+TVG+ L+ L F D D IE G ++
Sbjct: 18 VIQNQTADILAALGTRAIVLVGMMGSGKSTVGRRLAARLRLPFVDADQEIETRHGGMTIT 77
Query: 103 EIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLE 161
EIF +GE +FRE E +V+ L V++TGGGA R R K +S+WL
Sbjct: 78 EIFATHGEPYFREGEAKVISALLDGGAQVLATGGGAFVRDDTRERIRSKAVSIWLKADGA 137
Query: 162 ALAQRIAAVGTDSRPLLHQCESGDAYTEAL 191
+ +R+ RPLL Q E A E L
Sbjct: 138 TVLRRVKR--RSDRPLL-QTEDPAATIERL 164
>gi|332981708|ref|YP_004463149.1| shikimate kinase [Mahella australiensis 50-1 BON]
gi|332699386|gb|AEE96327.1| Shikimate kinase [Mahella australiensis 50-1 BON]
Length = 173
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 11/161 (6%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
G IYL G MG+GKTTVG++L+ L +F D D IEQ + G +V IF +YGE FFR+
Sbjct: 2 GNNIYLTGFMGTGKTTVGRLLAKELNMNFVDTDEFIEQGM-GMTVPSIFGIYGEAFFRQL 60
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSR 175
E L ++ + +VVSTGGG V R N M++ G+ + LD + + + + + R
Sbjct: 61 EHNALISIAYRQGVVVSTGGGIVLRDDNINIMRRSGVMICLDASPDTVMRNVGS--GKGR 118
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
P+L + GD + L ++R + Y A+ V++++
Sbjct: 119 PVL---DGGDLRRNIIE----LMDKRRQFYCQADIIVNIDD 152
>gi|260550836|ref|ZP_05825043.1| shikimate-kinase [Acinetobacter sp. RUH2624]
gi|425740024|ref|ZP_18858204.1| shikimate kinase 1 [Acinetobacter baumannii WC-487]
gi|445434958|ref|ZP_21440213.1| shikimate kinase 1 [Acinetobacter baumannii OIFC021]
gi|260406146|gb|EEW99631.1| shikimate-kinase [Acinetobacter sp. RUH2624]
gi|425495672|gb|EKU61849.1| shikimate kinase 1 [Acinetobacter baumannii WC-487]
gi|444755930|gb|ELW80494.1| shikimate kinase 1 [Acinetobacter baumannii OIFC021]
Length = 189
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET
Sbjct: 21 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEVGFRTRETV 79
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL +L+ + LV++TGGGA+T+ N ++ Q+GI ++L P+E QR +RPLL
Sbjct: 80 VLNELTSRKALVLATGGGAITQAPNREFLKQRGIVIYLYTPVELQLQR--TYRDKNRPLL 137
Query: 179 H 179
Sbjct: 138 Q 138
>gi|410943065|ref|ZP_11374806.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Gluconobacter frateurii NBRC 101659]
Length = 560
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 4/131 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ LVGMMG+GKTTVG+ L+ V G F D D IE++ G ++ EIF +GE +FR E
Sbjct: 23 VVLVGMMGAGKTTVGRRLAQVYGLPFIDADAEIERAA-GCTIPEIFARHGEAYFRAGERR 81
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+Q+L +++TGGGA + ++K +SVWL P+ L +R+ G RPLL
Sbjct: 82 VIQRLIKGPPCILATGGGAWMDAQTRQLVRKHAVSVWLRAPVHVLLRRVH--GRGGRPLL 139
Query: 179 HQCESGDAYTE 189
Q D T
Sbjct: 140 AQGSPEDIMTR 150
>gi|424057801|ref|ZP_17795318.1| shikimate kinase [Acinetobacter nosocomialis Ab22222]
gi|407439831|gb|EKF46352.1| shikimate kinase [Acinetobacter nosocomialis Ab22222]
Length = 189
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET
Sbjct: 21 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEVGFRTRETV 79
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL +L+ + LV++TGGGA+T+ N ++ Q+GI ++L P+E QR +RPLL
Sbjct: 80 VLNELTSRKALVLATGGGAITQASNREFLKQRGIVIYLYTPVELQLQR--TYRDKNRPLL 137
Query: 179 H 179
Sbjct: 138 Q 138
>gi|119899934|ref|YP_935147.1| shikimate kinase [Azoarcus sp. BH72]
gi|119672347|emb|CAL96261.1| probable shikimate kinase [Azoarcus sp. BH72]
Length = 178
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Query: 59 CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKET 118
C+ L+GMMG+GKTTVG+ L+ G F DCD I G S+ IF++ GE FR +E
Sbjct: 5 CLILIGMMGAGKTTVGRELAKRRGMRFVDCDHEIVART-GVSIPTIFEIEGEAGFRRREA 63
Query: 119 EVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPL 177
+ + +L+ +L+++TGGG V P N + Q+GI V+L+VP L +R +RPL
Sbjct: 64 QTIDELTREGELILATGGGVVLDPANRALLAQRGIVVYLNVPPHILWERTRH--DRNRPL 121
Query: 178 LHQCESGDAYTEALNR 193
L Q E+ E L++
Sbjct: 122 L-QVENPRQRIEQLHK 136
>gi|414165021|ref|ZP_11421268.1| shikimate kinase [Afipia felis ATCC 53690]
gi|410882801|gb|EKS30641.1| shikimate kinase [Afipia felis ATCC 53690]
Length = 205
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 4/150 (2%)
Query: 43 VLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVA 102
V +N+ +I L R I LVGMMGSGK+TVG+ L+ L F D D IE G ++
Sbjct: 10 VAQNQIADIVSALGARTIVLVGMMGSGKSTVGRRLAARLRLPFVDADHEIETRHGGMTIT 69
Query: 103 EIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLE 161
EIF +GE +FRE E +V+ L V++TGGGAV R R K +S+WL
Sbjct: 70 EIFATHGEPYFREGEAKVISALLDGGAQVLATGGGAVLREDTRTRIHDKAVSIWLKADGA 129
Query: 162 ALAQRIAAVGTDSRPLLHQCESGDAYTEAL 191
+ +R+ RPLL Q E A E L
Sbjct: 130 TVLRRVKR--RSDRPLL-QTEDPAATIERL 156
>gi|20807724|ref|NP_622895.1| shikimate kinase [Thermoanaerobacter tengcongensis MB4]
gi|81481662|sp|Q8RAE8.1|AROK_THETN RecName: Full=Shikimate kinase; Short=SK
gi|20516276|gb|AAM24499.1| Shikimate kinase [Thermoanaerobacter tengcongensis MB4]
Length = 171
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 86/153 (56%), Gaps = 11/153 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I L G MG+GKTTVGK ++ L ++F D D L+E+ + G SVAEIF+ +GE +FR+ E
Sbjct: 2 KNIVLTGFMGTGKTTVGKKVATTLHFNFIDTDKLVEK-MAGMSVAEIFEKHGEEYFRKLE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+ K S ++ V++TGGG V P N ++K G+ + L E + + I+ T RP
Sbjct: 61 KAAVIKASRLKNHVIATGGGVVLNPSNIVQLRKNGVIILLKARPEVILRNISK--TKDRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LL A + R+ L EER Y A+
Sbjct: 119 LL-------AVEDPEKRIRELLEEREPFYRFAD 144
>gi|315646136|ref|ZP_07899256.1| Shikimate kinase [Paenibacillus vortex V453]
gi|315278335|gb|EFU41651.1| Shikimate kinase [Paenibacillus vortex V453]
Length = 170
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 92/154 (59%), Gaps = 12/154 (7%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
G+ I L+GMMG+GK+TVG++++ LGY+ D DT IE+ +DG ++ E+F+ GE +FRE
Sbjct: 5 GKNIILIGMMGTGKSTVGRLVADSLGYTLIDLDTEIEK-LDGRTIPEMFEADGESYFREA 63
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSR 175
E+ L+ + L + +VV++GGGAV N M Q G V L ++ +R+ G +R
Sbjct: 64 ESAALRSVLLRKGIVVASGGGAVLSSENCEAMKQGGWVVALTADAASIVERVR--GDVNR 121
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
PLL +GD R+ + +ER + Y A+
Sbjct: 122 PLL----AGDVE----ERVGRILDERKDKYLFAD 147
>gi|424872594|ref|ZP_18296256.1| shikimate kinase [Rhizobium leguminosarum bv. viciae WSM1455]
gi|393168295|gb|EJC68342.1| shikimate kinase [Rhizobium leguminosarum bv. viciae WSM1455]
Length = 196
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 84/140 (60%), Gaps = 7/140 (5%)
Query: 41 AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTS 100
A+ LK++++ L R + LVG+MG+GK++VG+I++ L F D D IE+ V +
Sbjct: 9 AESLKDRAR---AALGSRNLILVGLMGAGKSSVGRIVASQLAIPFIDSDLEIER-VSRMT 64
Query: 101 VAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVP 159
+AE+F YGE FR E V+++L VVSTGGGA ++++K G+SVWL
Sbjct: 65 IAELFAAYGEQEFRALEARVIKRLLKSGPRVVSTGGGAFINDRTRKHIKKGGLSVWLKAD 124
Query: 160 LEALAQRIAAVGTDSRPLLH 179
L+ L R+A D+RPLL
Sbjct: 125 LDVLWDRVAK--RDTRPLLK 142
>gi|429463041|ref|YP_007184504.1| shikimate kinase [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451811821|ref|YP_007448276.1| shikimate kinase [Candidatus Kinetoplastibacterium crithidii
TCC036E]
gi|429338555|gb|AFZ82978.1| shikimate kinase [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451776979|gb|AGF47978.1| shikimate kinase [Candidatus Kinetoplastibacterium crithidii
TCC036E]
Length = 209
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 89/147 (60%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVGMMG+GK+T+G+ L+ + F D D IE S G + IF++ GE FR++E++
Sbjct: 40 IFLVGMMGAGKSTIGRSLAQYMERKFVDLDCEIEASC-GVKIPVIFEIEGESGFRKRESD 98
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
LQK SL ++V++TGGGA+ P N + ++ +GI ++L L+ L +R ++ +RPLL
Sbjct: 99 FLQKYSLDEKIVLATGGGAILSPHNRQILKSRGIVIYLKAELDVLFKRTSS--DHNRPLL 156
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ D Y +L +L + R Y
Sbjct: 157 ---ATKDPYL----KLQSLLKLREPMY 176
>gi|225872603|ref|YP_002754058.1| shikimate kinase [Acidobacterium capsulatum ATCC 51196]
gi|225792249|gb|ACO32339.1| shikimate kinase domain protein [Acidobacterium capsulatum ATCC
51196]
Length = 209
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 87/165 (52%), Gaps = 15/165 (9%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R + L G MG+GKTT+G++L+ LG+ F D DT I Q G +VA+IF+ GE FR +E
Sbjct: 29 RAVVLTGFMGAGKTTLGRLLAAELGWEFRDLDTEIAQD-SGMTVADIFRAEGEAGFRARE 87
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM---QKGISVWLDVPLEALAQR-IAAVGTD 173
E+L +L ++V++ GGGAV + + V+L PLEAL QR + G
Sbjct: 88 MEMLARLLRRERMVLALGGGAVESEGVREQLAACKDACVVYLSAPLEALVQRCLEQPGAA 147
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
RP+L E RL + W R Y A+ R+ E ++
Sbjct: 148 ERPVLADRE----------RLRSRWAARLPYYEQAHLRLETEGLS 182
>gi|387130722|ref|YP_006293612.1| shikimate kinase [Methylophaga sp. JAM7]
gi|386272011|gb|AFJ02925.1| Shikimate kinase I [Methylophaga sp. JAM7]
Length = 177
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 98/183 (53%), Gaps = 19/183 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++LVG MG+GK+T+G+ L+ L +F D D IEQ G S++ IF++ GE FRE+E +
Sbjct: 6 LFLVGPMGAGKSTIGRHLAKRLRRTFLDSDREIEQRT-GVSISWIFEMEGEAGFREREQK 64
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+++ L+ M +V++TGGGAV +N +Y+ ++G ++L E L +R+A SRPLL
Sbjct: 65 MIEALTEMDNIVLATGGGAVLAEMNRQYLSERGTVIYLAASAEQLFRRMAR--DKSRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
+ L + L+ E + +I V G + V VT I
Sbjct: 123 QTGDKKKQIKSLLTKRDPLYRE-------------IADIVVLTGEQSVQR--TVTEVIRK 167
Query: 239 LEQ 241
LEQ
Sbjct: 168 LEQ 170
>gi|433488980|ref|ZP_20446130.1| shikimate kinase family protein [Neisseria meningitidis M13255]
gi|432221309|gb|ELK77120.1| shikimate kinase family protein [Neisseria meningitidis M13255]
Length = 170
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 96/176 (54%), Gaps = 20/176 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+G+ I L+G+MG+GKTT+G+ ++ L Y F+D D I S G + IF++ GE FR
Sbjct: 4 FNGKLI-LIGLMGAGKTTLGRQMAQRLDYRFYDSDHEI-ASAAGVPIPTIFEMEGEQGFR 61
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
+ET +L+KL ++ +V+STGGGAV + N ++K G V+L P E L +R +
Sbjct: 62 SRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DN 119
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 221
SRPLL + L +L L+ R Y +AN R +++ + +L
Sbjct: 120 SRPLLQ-------VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 168
>gi|414154644|ref|ZP_11410961.1| Shikimate kinase [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411453475|emb|CCO08865.1| Shikimate kinase [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 175
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 91/158 (57%), Gaps = 11/158 (6%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MG+GK+TVG+ L+ LGY F D D IEQ + G +V +IF+ +G FR +E
Sbjct: 4 IVLIGFMGTGKSTVGRALAKRLGYRFIDTDYAIEQ-ITGLTVEQIFRKHGVKRFRGEEVL 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+ +KL+ LV++TGGG V P N + + Q G V L E + +R+ +RPLL
Sbjct: 63 LARKLAAQENLVIATGGGMVLDPENVKMLRQNGFLVCLAASSETICRRVR--NKRTRPLL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
+ G+ + R+++L EER AY A+ V+ ++
Sbjct: 121 AR---GNLH----RRVASLLEERKGAYQTADFTVNTDD 151
>gi|254452698|ref|ZP_05066135.1| shikimate kinase [Octadecabacter arcticus 238]
gi|198267104|gb|EDY91374.1| shikimate kinase [Octadecabacter arcticus 238]
Length = 171
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Query: 63 VGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQ 122
+GMMGSGKT +G+ ++ LG + D D IE + + T +AEIF GE FFR +E EV+
Sbjct: 1 MGMMGSGKTAIGRAMAMKLGVPYVDSDAEIEAAANAT-IAEIFARSGEPFFRNREAEVIA 59
Query: 123 KLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQC 181
+L V+STGGGA N + K G++VWLD L+ L +R+ D+RPLL
Sbjct: 60 RLLQSDPCVLSTGGGAYLAERNRAAISKHGVAVWLDADLDLLWERVQ--HKDTRPLLRT- 116
Query: 182 ESGDAYTEALNRLSTLWEERGEAYANANARV 212
+ L ++++R Y A+ RV
Sbjct: 117 ------PDPRKTLGEIFKDRAPIYQMADLRV 141
>gi|315918027|ref|ZP_07914267.1| shikimate kinase [Fusobacterium gonidiaformans ATCC 25563]
gi|317057995|ref|ZP_07922480.1| shikimate kinase [Fusobacterium sp. 3_1_5R]
gi|313683671|gb|EFS20506.1| shikimate kinase [Fusobacterium sp. 3_1_5R]
gi|313691902|gb|EFS28737.1| shikimate kinase [Fusobacterium gonidiaformans ATCC 25563]
Length = 172
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 85/147 (57%), Gaps = 10/147 (6%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MGSGKTTVG++L+ L F D D +I + + S+++IF+ GE +FR+KE E
Sbjct: 5 IALIGFMGSGKTTVGRLLAKQLDMKFVDVDKVI-AAQEKKSISDIFQENGEQYFRQKERE 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ + S +V+STGGGA+ N + +Q V+LD + + R+ + RPLL
Sbjct: 64 IILQESTKNNVVISTGGGAIIDNENIKNLQNTCFIVYLDADVHCIYDRVK--NSKHRPLL 121
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
E+ +A+ +STL E+R Y
Sbjct: 122 QNIENLEAH------ISTLLEKRRFLY 142
>gi|414175668|ref|ZP_11430072.1| shikimate kinase [Afipia broomeae ATCC 49717]
gi|410889497|gb|EKS37300.1| shikimate kinase [Afipia broomeae ATCC 49717]
Length = 207
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 50 EIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYG 109
+I L GR I LVGMMGSGK+T+G+ L L F D D IE + G +V+EIF +G
Sbjct: 17 DIVAALGGRSIVLVGMMGSGKSTIGRRLGARLHVPFLDADHEIEIAHAGMTVSEIFAQHG 76
Query: 110 EGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIA 168
E +FR+ E V+ +L V++TGGGA R R + K +S+WL + + +R+
Sbjct: 77 EPYFRDGEARVIARLLETGPCVIATGGGAFMREETRRRIHDKAVSIWLQADGDIILRRVK 136
Query: 169 AVGTDSRPLLHQCESGDAYTEALNRLSTLWE 199
RPLL + + S ++
Sbjct: 137 RRA--DRPLLQTADPAATIARLIGERSPFYQ 165
>gi|78486474|ref|YP_392399.1| shikimate kinase [Thiomicrospira crunogena XCL-2]
gi|116257514|sp|Q31DP8.1|AROK_THICR RecName: Full=Shikimate kinase; Short=SK
gi|78364760|gb|ABB42725.1| shikimate kinase [Thiomicrospira crunogena XCL-2]
Length = 174
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 90/163 (55%), Gaps = 12/163 (7%)
Query: 59 CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKET 118
I+LVG MG+GK+TVG+ L+ L Y F D D +IE G ++ IF + GE FR +E
Sbjct: 5 SIFLVGPMGAGKSTVGRFLADKLHYQFLDSDQVIEDKT-GATIPMIFDIEGESGFRAREK 63
Query: 119 EVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPL 177
+ L+ ++V++TGGGA+ P N + ++ +G V+L +++L QR +RPL
Sbjct: 64 AAIDDLTQQSEIVLATGGGAILNPENRKNLRSRGFVVYLKSSVDSLVQRTRH--DRNRPL 121
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYAN-ANARVSLENIAV 219
L Q E+ + L L EERG Y A+ + E ++V
Sbjct: 122 L-QTENPEQV------LRKLIEERGPLYEEVADLVIQTEQVSV 157
>gi|291533892|emb|CBL07005.1| Shikimate kinase [Megamonas hypermegale ART12/1]
Length = 128
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 71/120 (59%), Gaps = 5/120 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MGSGK+ GK+L+ LGYSF D DT IEQ T + ++F GE FR++ET
Sbjct: 5 IVLIGFMGSGKSITGKLLAYRLGYSFVDTDTAIEQEYK-TKIKDMFAKEGEAVFRQRETA 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+QKL+ V+STGGG T+ + + ++K GI + L + +R G D RPLL
Sbjct: 64 TIQKLAQKSHQVISTGGGVATKETDMQELRKNGIIIALTAMPHTILKR---TGNDKRPLL 120
>gi|313669029|ref|YP_004049313.1| shikimate kinase [Neisseria lactamica 020-06]
gi|313006491|emb|CBN87954.1| putative shikimate kinase [Neisseria lactamica 020-06]
Length = 170
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 84/147 (57%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G+MG+GKTT+G+ ++ L Y F+D D I + G S+ IF++ GE FR +ET
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVSIPTIFEMEGERGFRSRETA 66
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+KL ++ +V+STGGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 67 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLL 124
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ L +L L+ R Y
Sbjct: 125 Q-------VADPLGKLRELYAARDPVY 144
>gi|387793517|ref|YP_006258582.1| shikimate kinase [Solitalea canadensis DSM 3403]
gi|379656350|gb|AFD09406.1| shikimate kinase [Solitalea canadensis DSM 3403]
Length = 167
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++L+G MG+GKTT GK L+ L Y FFD D LIE+ + G +V E F +GE FRE E +
Sbjct: 3 VFLIGFMGAGKTTFGKKLAKNLNYPFFDLDHLIEE-ITGGTVGEYFATHGEIKFRELEKD 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+LQ V+STGGGA N +M K G +++L + +ALA R+ + RPL+
Sbjct: 62 ILQTHPFPENYVLSTGGGAPCFHDNMDWMNKNGQTIYLQLSPKALATRLENA-KEQRPLI 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEA 204
+ D L EER EA
Sbjct: 121 KDLKGDD--------LIKFIEERLEA 138
>gi|85373821|ref|YP_457883.1| shikimate kinase [Erythrobacter litoralis HTCC2594]
gi|84786904|gb|ABC63086.1| shikimate kinase [Erythrobacter litoralis HTCC2594]
Length = 189
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R + LVG+MG GK+TVG+ L+ ++ F D D IE++ S++EIF +GE +FR+ E
Sbjct: 22 RPVVLVGLMGVGKSTVGRRLAKLMQRDFIDADDEIEEAAQ-MSISEIFSAFGEDYFRDGE 80
Query: 118 TEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRP 176
V+ +L V++TGGGA V + +GI+VW+D + L +R D+RP
Sbjct: 81 RRVIARLMGEGHGVIATGGGAFVNAETRALILDQGIAVWIDCDIPTLVERTGR--RDTRP 138
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
LL Q GD E L RL ER + Y+ A RVS
Sbjct: 139 LLRQ---GDP-EEILARLH---REREKFYSQAPIRVS 168
>gi|262280336|ref|ZP_06058120.1| shikimate-kinase [Acinetobacter calcoaceticus RUH2202]
gi|262258114|gb|EEY76848.1| shikimate-kinase [Acinetobacter calcoaceticus RUH2202]
Length = 189
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 76/121 (62%), Gaps = 4/121 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET
Sbjct: 21 IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEIGFRTRETI 79
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL +L+ LV++TGGGA+T+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 80 VLNELTSRNALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL 137
Query: 179 H 179
Sbjct: 138 Q 138
>gi|170747113|ref|YP_001753373.1| shikimate kinase [Methylobacterium radiotolerans JCM 2831]
gi|170653635|gb|ACB22690.1| Shikimate kinase [Methylobacterium radiotolerans JCM 2831]
Length = 203
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 11/156 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I LVG+MG+GK+TVG+ L+ LG F D D IE + G ++ +IF +YGE FR+ E
Sbjct: 25 RSIVLVGLMGAGKSTVGRRLASRLGLIFKDADIEIEAAA-GLTIPDIFAIYGEPSFRDGE 83
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRP 176
V+ +L LV++TGGGA R R + +SVWL L+ L +R+ G +RP
Sbjct: 84 ERVISRLLRAGPLVLATGGGAYLREATRARIAESAVSVWLKADLDVLMRRVRKRG--NRP 141
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
LL Q E +A + L R YA A+ V
Sbjct: 142 LL-QTEDPEAT------MRDLMAVRHPVYAAADVMV 170
>gi|400289033|ref|ZP_10791065.1| shikimate kinase [Psychrobacter sp. PAMC 21119]
Length = 173
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 73/116 (62%), Gaps = 4/116 (3%)
Query: 66 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 125
MG+GKTT+G++L+ LG +F D D IE S G +A IF GE FRE+ET + +LS
Sbjct: 1 MGAGKTTIGRLLAKQLGRTFVDSDWYIE-SQTGADIAWIFAKEGEAGFRERETRAIDELS 59
Query: 126 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
+Q+V++TGGGAV N ++ Q+GI V+L+ P++ R A SRPLL Q
Sbjct: 60 QQKQIVLATGGGAVMAAENREFLKQRGIVVYLNAPVDVQMARTAK--DKSRPLLQQ 113
>gi|424916562|ref|ZP_18339926.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM597]
gi|392852738|gb|EJB05259.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM597]
Length = 196
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 82/139 (58%), Gaps = 7/139 (5%)
Query: 41 AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTS 100
A LK++++ L R + LVG+MG+GK+ VG+I++ LG F D D IE+ V +
Sbjct: 9 ADSLKDRAR---AALGSRNLILVGLMGAGKSAVGRIVASQLGIPFIDSDHEIER-VSRMT 64
Query: 101 VAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVP 159
+ E+F YGE FR ET V+++L VVSTGGGA R++ K G+SVWL
Sbjct: 65 IPELFAAYGEDEFRALETRVMKRLLKGGPRVVSTGGGAFINERTRRHIIKGGVSVWLKAD 124
Query: 160 LEALAQRIAAVGTDSRPLL 178
L+ L +R+ D+RPLL
Sbjct: 125 LDVLWERVNK--RDNRPLL 141
>gi|126729517|ref|ZP_01745330.1| shikimate kinase [Sagittula stellata E-37]
gi|126709636|gb|EBA08689.1| shikimate kinase [Sagittula stellata E-37]
Length = 190
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 17/171 (9%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + VGMMG+GKT VGK L+ LG F D D IE + ++AEIF GE FFR KE
Sbjct: 14 KTVVFVGMMGAGKTAVGKTLASRLGVKFRDSDHEIEVAAQ-MNIAEIFARDGEDFFRRKE 72
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
++++ +L V+STGGGA N + + + G+SVWL+ LE L +R+ D+RP
Sbjct: 73 SQIIGRLLDGAPGVLSTGGGAFMSEANRKMISELGVSVWLNADLELLWERVRH--KDTRP 130
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARV------SLENIAVKL 221
LL + L L++ R YA A+ V SL+ +A ++
Sbjct: 131 LLKTADPK-------GTLRGLYDRRVPIYALADLAVRSEPGMSLDKMAARV 174
>gi|414169095|ref|ZP_11424932.1| shikimate kinase [Afipia clevelandensis ATCC 49720]
gi|410885854|gb|EKS33667.1| shikimate kinase [Afipia clevelandensis ATCC 49720]
Length = 204
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Query: 46 NKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIF 105
+ +I L GR + LVGMMGSGK+T+G+ L L F D D IE + G SV+EIF
Sbjct: 13 TREADIVAALHGRPVVLVGMMGSGKSTIGRRLGARLHMPFLDADHEIEVAHAGMSVSEIF 72
Query: 106 KLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALA 164
+GE +FR+ E V+ +L V++TGGGA R R K +S+WL + +
Sbjct: 73 AQHGEPYFRDGEARVIARLLEGGSCVIATGGGAFMREETRNRIHDKAVSIWLKADGDVIL 132
Query: 165 QRIAAVGTDSRPLL 178
+R+ RPLL
Sbjct: 133 KRVKRRA--DRPLL 144
>gi|345304321|ref|YP_004826223.1| shikimate kinase [Rhodothermus marinus SG0.5JP17-172]
gi|345113554|gb|AEN74386.1| Shikimate kinase [Rhodothermus marinus SG0.5JP17-172]
Length = 192
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL G MG GK+T+G +L+ LGY+F D D LIE+ G S+ EIF GE FR E E
Sbjct: 11 IYLTGFMGCGKSTIGPLLARRLGYTFLDLDALIERQA-GRSIPEIFAEGGEAAFRALERE 69
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
L++ + V++TGGGA+ N + ++ G V+L V + LA+R+A T RPLL
Sbjct: 70 ALRRTVALDACVIATGGGALVSDDNLAWALRNGRVVYLQVSADELARRLAPEAT-HRPLL 128
Query: 179 HQCESGDAYTEAL-NRLSTLWEERGEAYANANARVSLENIAV 219
AL R++ + R Y A+ V+ + +++
Sbjct: 129 QDRHHRPLQGAALRRRIAAMLARREPWYRQAHHVVATDGLSI 170
>gi|418053795|ref|ZP_12691851.1| Shikimate kinase [Hyphomicrobium denitrificans 1NES1]
gi|353211420|gb|EHB76820.1| Shikimate kinase [Hyphomicrobium denitrificans 1NES1]
Length = 564
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 85/159 (53%), Gaps = 11/159 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I LVG+MG GK+++GK L+ LG F D D IE++ T + EIF +GE FR
Sbjct: 14 LGKRSIVLVGLMGCGKSSIGKRLAARLGLPFVDADEEIERAAAKT-INEIFTDHGEAHFR 72
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
+ E +V+ +L V++TGGGA P R + G+S+WL L L +R+ + D
Sbjct: 73 DGERKVISRLLNNGPQVLATGGGAYMHPETRQRIRENGVSIWLRADLPVLMRRV--MKRD 130
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
+RPLL D EA R L E R YA A+ V
Sbjct: 131 TRPLLR-----DGNPEATMR--KLIEARYPIYAEADMTV 162
>gi|386265435|ref|YP_005828927.1| shikimate kinase [Haemophilus influenzae R2846]
gi|309972671|gb|ADO95872.1| Shikimate kinase I [Haemophilus influenzae R2846]
Length = 180
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 4/135 (2%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMDFIDSDAVIEERT-GADISWIFDLEGEDGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ M+ +V+STGGGAV N Y+ +GI ++L+ +E QR RP
Sbjct: 64 ERIINELTQMQGIVLSTGGGAVLSKENRNYLSARGIVIYLETTVEKQFQRTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEAL 191
LL E+ E L
Sbjct: 122 LLQDAENPRQVLEDL 136
>gi|359428745|ref|ZP_09219775.1| shikimate kinase [Acinetobacter sp. NBRC 100985]
gi|358235931|dbj|GAB01314.1| shikimate kinase [Acinetobacter sp. NBRC 100985]
Length = 186
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 75/121 (61%), Gaps = 4/121 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET
Sbjct: 18 IYLVGPMGAGKTTVGRHLAELLGRDFIDSDHEIERKT-GATIPWIFEKEGEVGFRLRETN 76
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL L+ LV++TGGGAVT+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 77 VLNDLTNRSSLVLATGGGAVTQLANREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL 134
Query: 179 H 179
Sbjct: 135 Q 135
>gi|209551172|ref|YP_002283089.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|254806782|sp|B5ZSI5.1|AROK_RHILW RecName: Full=Shikimate kinase; Short=SK
gi|209536928|gb|ACI56863.1| Shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 196
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 82/139 (58%), Gaps = 7/139 (5%)
Query: 41 AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTS 100
A LK++++ L R + LVG+MG+GK+ VG+I++ LG F D D IE+ V +
Sbjct: 9 ADSLKDRAR---AALGSRNLILVGLMGAGKSAVGRIVASQLGIPFIDSDHEIER-VSRMT 64
Query: 101 VAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVP 159
+ E+F YGE FR ET V+++L VVSTGGGA R++ K G+SVWL
Sbjct: 65 IPELFAAYGEDEFRALETRVMKRLLKGGPRVVSTGGGAFINERTRRHIIKGGVSVWLKAD 124
Query: 160 LEALAQRIAAVGTDSRPLL 178
L+ L +R+ D+RPLL
Sbjct: 125 LDVLWERVNK--RDNRPLL 141
>gi|295690853|ref|YP_003594546.1| shikimate kinase [Caulobacter segnis ATCC 21756]
gi|295432756|gb|ADG11928.1| Shikimate kinase [Caulobacter segnis ATCC 21756]
Length = 201
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 94/181 (51%), Gaps = 13/181 (7%)
Query: 33 NVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLI 92
+ H P D+A + S+++ P L + I LVG+MG GK++VG+ L+ L F D D +
Sbjct: 4 SAHPPEDKASA-RQGSEDLAP-LRQKTIVLVGLMGVGKSSVGRRLATALNLPFRDADNEV 61
Query: 93 EQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKG 151
E + G S++EIF GE FR+ E V+ +L V++TGGGA V +K
Sbjct: 62 EAAA-GRSISEIFAELGEAAFRDGERRVIARLLEEPPHVLATGGGAFVNAETRALINEKA 120
Query: 152 ISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANAR 211
+SVWL +E LA+R++ D+RPLL + TE L R AYA A
Sbjct: 121 LSVWLKADVELLARRVSR--KDTRPLLKGKDPVAVLTE-------LARVRNPAYAEAQVH 171
Query: 212 V 212
V
Sbjct: 172 V 172
>gi|222529685|ref|YP_002573567.1| shikimate kinase [Caldicellulosiruptor bescii DSM 6725]
gi|254806763|sp|B9MKD6.1|AROK_ANATD RecName: Full=Shikimate kinase; Short=SK
gi|222456532|gb|ACM60794.1| Shikimate kinase [Caldicellulosiruptor bescii DSM 6725]
Length = 172
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 101/173 (58%), Gaps = 11/173 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I L G MGSGKTT+GK+++ L D D+ + + G ++ +IF+++GE FRE E
Sbjct: 2 KNIVLTGFMGSGKTTIGKLIAEKLDIELIDTDSEVIKEF-GMTIDKIFEVHGEKKFREVE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
T+V++++S + +V+STGGG V P N + +++ G+ +L P E++ +R+ D+RP
Sbjct: 61 TKVIERVSKLENVVISTGGGVVLNPENVKLLRENGVIYFLYAPAESILKRLK--DDDTRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 229
LL ++GD L+ + L R Y N + ++ + + +L + + S+
Sbjct: 119 LL---KNGD----KLSNIIRLLNMRMPFYKNCDFEINTDILTPELAAEKIISI 164
>gi|261405755|ref|YP_003241996.1| Shikimate kinase [Paenibacillus sp. Y412MC10]
gi|261282218|gb|ACX64189.1| Shikimate kinase [Paenibacillus sp. Y412MC10]
Length = 172
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 94/159 (59%), Gaps = 14/159 (8%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
GR I L+GMMG+GK+TVG++++ LGY+ D D IE+ ++G +++E+F+ GE +FRE
Sbjct: 7 GRNIILIGMMGTGKSTVGRLVADSLGYNLIDLDAEIER-MEGRTISEMFETEGEPYFREA 65
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIA--AVGTDS 174
E+ L+ + L +V+++GGGAV R N M++G W+ V L A A I G +
Sbjct: 66 ESAALRSVLLRDGIVLASGGGAVLRSDNCDVMKRG--GWV-VALTADAASIVERVRGDAN 122
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
RPLL +GD R+ + +ER + Y A+ V
Sbjct: 123 RPLL----AGDVE----ERVRRILDERKDKYRFADVMVD 153
>gi|408376457|ref|ZP_11174062.1| shikimate kinase [Agrobacterium albertimagni AOL15]
gi|407749924|gb|EKF61435.1| shikimate kinase [Agrobacterium albertimagni AOL15]
Length = 196
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + LVG+MG+GK+ +G+I++ LG F D DT IE+ V ++AE+F YGE FR
Sbjct: 20 LGKRNLVLVGLMGAGKSAIGRIVAQQLGLPFVDTDTEIER-VSRMTIAELFAAYGEEEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
ET V+++L VVSTGGGA + +++ G+SVWL+ L+ L +R+ D
Sbjct: 79 ALETRVIKRLLRTGPRVVSTGGGAFINERTRKQIERGGLSVWLNADLDVLWERVNK--RD 136
Query: 174 SRPLL 178
RPLL
Sbjct: 137 HRPLL 141
>gi|319409437|emb|CBI83086.1| Shikimate kinase [Bartonella schoenbuchensis R1]
Length = 195
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L+ + + VG+MGSGK+ VGK ++ +L F+D D IE++ T +A++F++YGE FR
Sbjct: 22 LNQQTLVFVGLMGSGKSVVGKHVAAMLSLPFYDSDQEIEKAAQMT-IAQLFEMYGESKFR 80
Query: 115 EKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
E +V+ + L+++TGGGA + I Q IS+WL L L +R++ G
Sbjct: 81 ALEQKVILNIIKKGPLILATGGGAYMNENIRKAIHQNSISIWLKADLHVLIERVS--GCF 138
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
+RPLL + + L E+R YA AN ++
Sbjct: 139 ARPLLQTANPKET-------MQKLMEQRYPIYAQANLTIN 171
>gi|255659655|ref|ZP_05405064.1| shikimate kinase [Mitsuokella multacida DSM 20544]
gi|260848217|gb|EEX68224.1| shikimate kinase [Mitsuokella multacida DSM 20544]
Length = 176
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 24/189 (12%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MG+GKT+ G++L+ LG +F D D IE +G ++ IF GE +FR E
Sbjct: 4 IVLIGFMGTGKTSTGRVLAQKLGAAFLDLDQEIEAE-EGMAIPAIFAQKGEPYFRAAEHR 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++++++ + V+STGGG V P N + Q G+ V L ++ + R A+ G RP+L
Sbjct: 63 MVERVAARQNAVISTGGGTVKDPANVALLRQSGVIVCLTADVDTILMRTASKG--ERPVL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
+ + GD + TL EER Y A+ V D S L+P ++
Sbjct: 121 DKEDKGDRR----RAVETLIEERRPLYRQADFSV------------DTSRLSP----LQV 160
Query: 239 LEQIEGFLK 247
+E+I +LK
Sbjct: 161 VEEILHYLK 169
>gi|197104210|ref|YP_002129587.1| shikimate kinase [Phenylobacterium zucineum HLK1]
gi|196477630|gb|ACG77158.1| shikimate kinase [Phenylobacterium zucineum HLK1]
Length = 187
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 90/169 (53%), Gaps = 12/169 (7%)
Query: 51 IEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGE 110
EP L R I LVG+MG GK++VG+ L+ LG F D D+ +E + G S+++IF GE
Sbjct: 9 FEP-LRRRTIALVGLMGVGKSSVGRRLASALGLPFRDADSEVEAAA-GRSISDIFADLGE 66
Query: 111 GFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAA 169
FR+ E V+ +L V++TGGGA + ++ K ISVWL LE LA+R+
Sbjct: 67 AAFRDGERRVIARLLDQPPHVLATGGGAFMNAETRQLIKSKAISVWLKTDLETLARRVGR 126
Query: 170 VGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
D+RPLL A + L L E R YA A+ V ++A
Sbjct: 127 --KDTRPLL-------AGKDPLEVLRAQAEVRYPVYAEADMTVETGDVA 166
>gi|241206575|ref|YP_002977671.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860465|gb|ACS58132.1| Shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 196
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 83/140 (59%), Gaps = 7/140 (5%)
Query: 41 AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTS 100
A LK++++ L R + LVG+MG+GK++VG+I++ L F D D IE+ V +
Sbjct: 9 ADSLKDRAR---AALGSRNLILVGLMGAGKSSVGRIVASQLSIPFIDSDLEIER-VSRMT 64
Query: 101 VAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVP 159
+AE+F YGE FR E V+++L VVSTGGGA ++++K G+SVWL
Sbjct: 65 IAELFAAYGEQEFRALEARVIKRLLKSGPRVVSTGGGAFINDRTRKHIKKGGLSVWLKAD 124
Query: 160 LEALAQRIAAVGTDSRPLLH 179
L+ L R+A D+RPLL
Sbjct: 125 LDVLWDRVAK--RDTRPLLK 142
>gi|427406973|ref|ZP_18897178.1| hypothetical protein HMPREF9161_01538 [Selenomonas sp. F0473]
gi|425707448|gb|EKU70492.1| hypothetical protein HMPREF9161_01538 [Selenomonas sp. F0473]
Length = 173
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G MG+GKTT+G++L+G LG +F D D IE++ G S+ E+F YGE +FR +E E
Sbjct: 4 VVLIGFMGTGKTTIGRLLAGRLGCAFHDLDRKIEET-GGMSIPEMFARYGEPYFRAREKE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ + LVV+TGGG V N +++ GI V L ++ + R A G RP+L
Sbjct: 63 AVRAAAARGNLVVATGGGVVKDAENIAALRRSGIIVALTADVDTILARTARCG--ERPVL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
++GD + +L +R Y A+ V D + P+ IA
Sbjct: 121 DGADAGDRRAA----IESLLADRRHLYEGADITV------------DTTGRAPLEIAEHI 164
Query: 239 LEQIE 243
++ I
Sbjct: 165 MQSIR 169
>gi|419797339|ref|ZP_14322828.1| shikimate kinase [Neisseria sicca VK64]
gi|385698342|gb|EIG28710.1| shikimate kinase [Neisseria sicca VK64]
Length = 170
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 89/149 (59%), Gaps = 11/149 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G+MG+GKTT+G+ ++ +L F+D D I + G S+ IF++ GE FR +ET
Sbjct: 8 LILIGLMGAGKTTLGRYIAQMLDRPFYDSDHEI-CTASGVSIPIIFEMEGEQGFRNRETA 66
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+KL+ M+ +++STGGG+V R N + M++ G+ V+L E L +R +SRPLL
Sbjct: 67 MLKKLTAMKDIILSTGGGSVLREENRQNMRRNGMVVYLHASPEVLLERTRY--DNSRPLL 124
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYAN 207
Q E+ L +L L+ R Y N
Sbjct: 125 -QVEN------PLAKLQELYNARDPLYRN 146
>gi|15677649|ref|NP_274810.1| shikimate kinase [Neisseria meningitidis MC58]
gi|161869407|ref|YP_001598574.1| shikimate kinase [Neisseria meningitidis 053442]
gi|218767604|ref|YP_002342116.1| shikimate kinase [Neisseria meningitidis Z2491]
gi|254804372|ref|YP_003082593.1| shikimate kinase [Neisseria meningitidis alpha14]
gi|385329059|ref|YP_005883362.1| putative shikimate kinase [Neisseria meningitidis alpha710]
gi|385337450|ref|YP_005891323.1| shikimate kinase [Neisseria meningitidis WUE 2594]
gi|385341336|ref|YP_005895207.1| shikimate kinase [Neisseria meningitidis M01-240149]
gi|385853871|ref|YP_005900385.1| shikimate kinase [Neisseria meningitidis H44/76]
gi|385855828|ref|YP_005902341.1| shikimate kinase [Neisseria meningitidis M01-240355]
gi|385856634|ref|YP_005903146.1| shikimate kinase [Neisseria meningitidis NZ-05/33]
gi|416184647|ref|ZP_11613081.1| shikimate kinase [Neisseria meningitidis M13399]
gi|416189027|ref|ZP_11615043.1| shikimate kinase [Neisseria meningitidis M0579]
gi|416198479|ref|ZP_11618955.1| shikimate kinase [Neisseria meningitidis CU385]
gi|416214544|ref|ZP_11622940.1| shikimate kinase [Neisseria meningitidis M01-240013]
gi|421538776|ref|ZP_15984948.1| putative shikimate kinase [Neisseria meningitidis 93003]
gi|421550489|ref|ZP_15996493.1| putative shikimate kinase [Neisseria meningitidis 69166]
gi|421555515|ref|ZP_16001445.1| putative shikimate kinase [Neisseria meningitidis 98008]
gi|421557768|ref|ZP_16003666.1| putative shikimate kinase [Neisseria meningitidis 80179]
gi|421566106|ref|ZP_16011865.1| putative shikimate kinase [Neisseria meningitidis NM3081]
gi|427827728|ref|ZP_18994752.1| shikimate kinase family protein [Neisseria meningitidis H44/76]
gi|433472438|ref|ZP_20429813.1| shikimate kinase family protein [Neisseria meningitidis 68094]
gi|433476230|ref|ZP_20433565.1| shikimate kinase family protein [Neisseria meningitidis 88050]
gi|433478777|ref|ZP_20436081.1| shikimate kinase family protein [Neisseria meningitidis 70012]
gi|433480380|ref|ZP_20437662.1| shikimate kinase family protein [Neisseria meningitidis 63041]
gi|433505623|ref|ZP_20462556.1| shikimate kinase family protein [Neisseria meningitidis 9506]
gi|433507802|ref|ZP_20464700.1| shikimate kinase family protein [Neisseria meningitidis 9757]
gi|433509996|ref|ZP_20466853.1| shikimate kinase family protein [Neisseria meningitidis 12888]
gi|433512007|ref|ZP_20468822.1| shikimate kinase family protein [Neisseria meningitidis 4119]
gi|433514118|ref|ZP_20470902.1| shikimate kinase family protein [Neisseria meningitidis 63049]
gi|433516342|ref|ZP_20473105.1| shikimate kinase family protein [Neisseria meningitidis 2004090]
gi|433518242|ref|ZP_20474982.1| shikimate kinase family protein [Neisseria meningitidis 96023]
gi|433520489|ref|ZP_20477201.1| shikimate kinase family protein [Neisseria meningitidis 65014]
gi|433523523|ref|ZP_20480191.1| shikimate kinase family protein [Neisseria meningitidis 97020]
gi|433526787|ref|ZP_20483410.1| shikimate kinase family protein [Neisseria meningitidis 69096]
gi|433527578|ref|ZP_20484190.1| shikimate kinase family protein [Neisseria meningitidis NM3652]
gi|433529779|ref|ZP_20486374.1| shikimate kinase family protein [Neisseria meningitidis NM3642]
gi|433531966|ref|ZP_20488533.1| shikimate kinase family protein [Neisseria meningitidis 2007056]
gi|433535221|ref|ZP_20491754.1| shikimate kinase family protein [Neisseria meningitidis 2001212]
gi|433537302|ref|ZP_20493798.1| shikimate kinase family protein [Neisseria meningitidis 77221]
gi|433538323|ref|ZP_20494807.1| shikimate kinase family protein [Neisseria meningitidis 70030]
gi|433541721|ref|ZP_20498164.1| shikimate kinase family protein [Neisseria meningitidis 63006]
gi|54036756|sp|P63600.1|AROK_NEIMB RecName: Full=Putative shikimate kinase; Short=SK
gi|54040825|sp|P63599.1|AROK_NEIMA RecName: Full=Putative shikimate kinase; Short=SK
gi|189046333|sp|A9M1U5.1|AROK_NEIM0 RecName: Full=Shikimate kinase; Short=SK
gi|7227066|gb|AAF42148.1| shikimate kinase [Neisseria meningitidis MC58]
gi|121051612|emb|CAM07912.1| putative shikimate kinase [Neisseria meningitidis Z2491]
gi|161594960|gb|ABX72620.1| shikimate kinase [Neisseria meningitidis 053442]
gi|254667914|emb|CBA04077.1| Shikimate kinase [Neisseria meningitidis alpha14]
gi|308389911|gb|ADO32231.1| putative shikimate kinase [Neisseria meningitidis alpha710]
gi|316984414|gb|EFV63387.1| shikimate kinase family protein [Neisseria meningitidis H44/76]
gi|319409864|emb|CBY90177.1| shikimate kinase (SK) [Neisseria meningitidis WUE 2594]
gi|325133589|gb|EGC56250.1| shikimate kinase [Neisseria meningitidis M13399]
gi|325135597|gb|EGC58214.1| shikimate kinase [Neisseria meningitidis M0579]
gi|325139634|gb|EGC62173.1| shikimate kinase [Neisseria meningitidis CU385]
gi|325143816|gb|EGC66132.1| shikimate kinase [Neisseria meningitidis M01-240013]
gi|325200875|gb|ADY96330.1| shikimate kinase [Neisseria meningitidis H44/76]
gi|325201542|gb|ADY96996.1| shikimate kinase [Neisseria meningitidis M01-240149]
gi|325204769|gb|ADZ00223.1| shikimate kinase [Neisseria meningitidis M01-240355]
gi|325207523|gb|ADZ02975.1| shikimate kinase [Neisseria meningitidis NZ-05/33]
gi|389606501|emb|CCA45414.1| shikimate kinase [Neisseria meningitidis alpha522]
gi|402315483|gb|EJU51046.1| putative shikimate kinase [Neisseria meningitidis 93003]
gi|402329752|gb|EJU65106.1| putative shikimate kinase [Neisseria meningitidis 98008]
gi|402329844|gb|EJU65195.1| putative shikimate kinase [Neisseria meningitidis 69166]
gi|402333643|gb|EJU68943.1| putative shikimate kinase [Neisseria meningitidis 80179]
gi|402341455|gb|EJU76633.1| putative shikimate kinase [Neisseria meningitidis NM3081]
gi|432206093|gb|ELK62107.1| shikimate kinase family protein [Neisseria meningitidis 68094]
gi|432208085|gb|ELK64064.1| shikimate kinase family protein [Neisseria meningitidis 88050]
gi|432212577|gb|ELK68514.1| shikimate kinase family protein [Neisseria meningitidis 70012]
gi|432214151|gb|ELK70057.1| shikimate kinase family protein [Neisseria meningitidis 63041]
gi|432239356|gb|ELK94910.1| shikimate kinase family protein [Neisseria meningitidis 9757]
gi|432239510|gb|ELK95062.1| shikimate kinase family protein [Neisseria meningitidis 9506]
gi|432244934|gb|ELL00413.1| shikimate kinase family protein [Neisseria meningitidis 12888]
gi|432245553|gb|ELL01021.1| shikimate kinase family protein [Neisseria meningitidis 4119]
gi|432246005|gb|ELL01467.1| shikimate kinase family protein [Neisseria meningitidis 63049]
gi|432251463|gb|ELL06830.1| shikimate kinase family protein [Neisseria meningitidis 2004090]
gi|432251980|gb|ELL07340.1| shikimate kinase family protein [Neisseria meningitidis 96023]
gi|432252155|gb|ELL07513.1| shikimate kinase family protein [Neisseria meningitidis 65014]
gi|432259078|gb|ELL14354.1| shikimate kinase family protein [Neisseria meningitidis 69096]
gi|432261580|gb|ELL16828.1| shikimate kinase family protein [Neisseria meningitidis 97020]
gi|432266478|gb|ELL21661.1| shikimate kinase family protein [Neisseria meningitidis NM3652]
gi|432268611|gb|ELL23778.1| shikimate kinase family protein [Neisseria meningitidis 2007056]
gi|432268871|gb|ELL24036.1| shikimate kinase family protein [Neisseria meningitidis NM3642]
gi|432270173|gb|ELL25317.1| shikimate kinase family protein [Neisseria meningitidis 2001212]
gi|432271725|gb|ELL26847.1| shikimate kinase family protein [Neisseria meningitidis 77221]
gi|432275194|gb|ELL30270.1| shikimate kinase family protein [Neisseria meningitidis 70030]
gi|432275924|gb|ELL30989.1| shikimate kinase family protein [Neisseria meningitidis 63006]
Length = 170
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 20/176 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+G+ I L+G+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR
Sbjct: 4 FNGKLI-LIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFR 61
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
+ET +L+KL ++ +V+STGGGAV + N ++K G V+L P E L +R +
Sbjct: 62 SRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DN 119
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 221
SRPLL + L +L L+ R Y +AN R +++ + +L
Sbjct: 120 SRPLLQ-------VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 168
>gi|329922662|ref|ZP_08278214.1| shikimate kinase [Paenibacillus sp. HGF5]
gi|328942004|gb|EGG38287.1| shikimate kinase [Paenibacillus sp. HGF5]
Length = 172
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 95/159 (59%), Gaps = 14/159 (8%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
GR I L+GMMG+GK+TVG++++ LGY+ D D+ IE+ ++G +++E+F+ GE +FRE
Sbjct: 7 GRNIILIGMMGTGKSTVGRLVADSLGYNLIDLDSEIER-MEGRTISEMFEKDGEPYFREA 65
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIA--AVGTDS 174
E+ L+ + L +V+++GGGAV R N M++G W+ V L A A I G +
Sbjct: 66 ESAALRSVLLRDGIVLASGGGAVLRSDNCDVMKRG--GWV-VALTADAASIVERVRGDAN 122
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
RPLL +GD R+ + +ER + Y A+ V
Sbjct: 123 RPLL----AGDVE----ERVRRILDERKDKYRFADVMVD 153
>gi|291044585|ref|ZP_06570294.1| shikimate kinase [Neisseria gonorrhoeae DGI2]
gi|291011479|gb|EFE03475.1| shikimate kinase [Neisseria gonorrhoeae DGI2]
Length = 195
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 20/176 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+G+ I L+G+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR
Sbjct: 4 FNGKLI-LIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFR 61
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
+ET +L+KL ++ +V+STGGGAV + N ++K G V+L P E L +R +
Sbjct: 62 SRETAILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DN 119
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 221
SRPLL + L +L L+ R Y +AN R +++ + +L
Sbjct: 120 SRPLLQ-------VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 168
>gi|116254086|ref|YP_769924.1| shikimate kinase [Rhizobium leguminosarum bv. viciae 3841]
gi|115258734|emb|CAK09840.1| putative shikimate kinase I [Rhizobium leguminosarum bv. viciae
3841]
Length = 185
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + LVG+MG+GK++VG+I++ L F D D IE+ V ++AE+F YGE FR
Sbjct: 9 LGSRNLILVGLMGAGKSSVGRIVASQLAIPFIDSDLEIER-VSRMTIAELFAAYGEQEFR 67
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
E V+++L VVSTGGGA ++++K G+SVWL L+ L R+A D
Sbjct: 68 ALEARVIKRLLKSGPRVVSTGGGAFINDRTRKHIRKGGLSVWLKADLDVLWDRVAK--RD 125
Query: 174 SRPLLH 179
+RPLL
Sbjct: 126 TRPLLK 131
>gi|319944754|ref|ZP_08019018.1| shikimate kinase [Lautropia mirabilis ATCC 51599]
gi|319742003|gb|EFV94426.1| shikimate kinase [Lautropia mirabilis ATCC 51599]
Length = 181
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 81/138 (58%), Gaps = 8/138 (5%)
Query: 59 CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKET 118
I+LVGMMG+GK+TVG L+ LG +F D D +E+ + G S+ IF+L GE FR +ET
Sbjct: 6 SIFLVGMMGAGKSTVGVRLARRLGRAFIDADRELEERL-GVSIPTIFELEGEEGFRRRET 64
Query: 119 EVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPL 177
++L +LS LV++TGGGAV P+N +Q +G V+L L QR+ RPL
Sbjct: 65 QLLDELSARDGLVLATGGGAVLSPVNRDMLQSRGRVVYLQASAADLWQRLRR--DRHRPL 122
Query: 178 LHQCESGDAYTEALNRLS 195
L E ++RL+
Sbjct: 123 LRTANP----RERIHRLT 136
>gi|350570766|ref|ZP_08939112.1| shikimate kinase [Neisseria wadsworthii 9715]
gi|349794714|gb|EGZ48524.1| shikimate kinase [Neisseria wadsworthii 9715]
Length = 172
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 86/151 (56%), Gaps = 11/151 (7%)
Query: 56 SGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFRE 115
S + ++L+G+MG+GKTT+G+ LS LG F+D D +I + G S+ IF+L GE FR
Sbjct: 4 SKKNLFLIGLMGAGKTTIGRRLSQELGQPFYDSDHVICEKT-GVSIPTIFELEGEEGFRT 62
Query: 116 KETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDS 174
+E V+ +L+ + ++++TGGGAV R N R +Q +G+ V+L E L +R +
Sbjct: 63 REACVINELTGKKGIILATGGGAVLREENRRCLQERGLVVYLHASPEVLLKRTRC--DKN 120
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
RPLL L +L L+E R Y
Sbjct: 121 RPLLQ-------VDNPLEKLQELYEARDPVY 144
>gi|342903898|ref|ZP_08725700.1| Shikimate kinase [Haemophilus haemolyticus M21621]
gi|373466857|ref|ZP_09558166.1| shikimate kinase [Haemophilus sp. oral taxon 851 str. F0397]
gi|417839138|ref|ZP_12485341.1| Shikimate kinase [Haemophilus haemolyticus M19107]
gi|417843151|ref|ZP_12489228.1| Shikimate kinase [Haemophilus haemolyticus M21127]
gi|341950385|gb|EGT76974.1| Shikimate kinase [Haemophilus haemolyticus M21127]
gi|341953907|gb|EGT80401.1| Shikimate kinase [Haemophilus haemolyticus M21621]
gi|341954854|gb|EGT81325.1| Shikimate kinase [Haemophilus haemolyticus M19107]
gi|371759621|gb|EHO48333.1| shikimate kinase [Haemophilus sp. oral taxon 851 str. F0397]
Length = 180
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 85/145 (58%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMDFIDSDAVIEERT-GADISWIFDLEGEEGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ M+ +V+STGGGAV + Y+ +GI ++L+ +E QR RP
Sbjct: 64 ERIINELTQMQGIVLSTGGGAVLSKESRNYLSARGIVIYLETTVEKQFQRTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL E+ E L ++ + L+EE
Sbjct: 122 LLQDAENPRQVLEDLAKIRNPLYEE 146
>gi|297181066|gb|ADI17265.1| shikimate kinase [uncultured alpha proteobacterium HF0070_17D04]
Length = 190
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 85/162 (52%), Gaps = 11/162 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R + LVGMMGSGKT +GK L+ L F D DT I ++ G S+AEIF + GE FR E
Sbjct: 20 RPVTLVGMMGSGKTIIGKKLAQELDLPFIDSDTRIVETA-GISIAEIFDIAGEAKFRAME 78
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
+ ++ ++STGGGA+ P + ++ I VWL E L RI + G SRP
Sbjct: 79 RDAIRIAVDEGPAILSTGGGAICAPDTAELLCKRTIVVWLSAAPETLLGRIGSTG--SRP 136
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
LLH GD + L L L ER Y A+ + + ++
Sbjct: 137 LLH----GD---DPLGMLGRLAAERETDYGKAHITIKTDGLS 171
>gi|296188518|ref|ZP_06856906.1| shikimate kinase [Clostridium carboxidivorans P7]
gi|296046782|gb|EFG86228.1| shikimate kinase [Clostridium carboxidivorans P7]
Length = 164
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 15/149 (10%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I L+GM GSGKTT+GKIL L F D D IE +G ++ +IFK GE +FR+ E
Sbjct: 4 KNIVLIGMPGSGKTTIGKILYEKLRTDFIDMDDYIEDR-EGKTIPDIFK-NGEDYFRKLE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
E + ++S + ++STGGG + N ++K GI +++D P+E +AQ I + SRP
Sbjct: 62 KEAVCEVSTKKSAIISTGGGVIKNFSNIENLKKNGIVIFIDRPVENIAQDINVL---SRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAY 205
LL + + +L L +ER E Y
Sbjct: 119 LLK---------DGVGKLYELLDERYELY 138
>gi|401564998|ref|ZP_10805856.1| shikimate kinase [Selenomonas sp. FOBRC6]
gi|400188360|gb|EJO22531.1| shikimate kinase [Selenomonas sp. FOBRC6]
Length = 173
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 96/185 (51%), Gaps = 20/185 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G MG+GKT+VG++L+ LG +F D D IE+ G S+ +F+ +GE +FR +E E
Sbjct: 4 VVLIGFMGTGKTSVGRLLAARLGCAFHDLDRKIEEK-HGMSIPAMFREHGEPYFRAREKE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+++ + LV++TGGG V N + Q GI V L ++ + QR +A G +RP+L
Sbjct: 63 AVREAAGRTNLVIATGGGTVKDAENVAILRQNGILVALTADVDTILQRTSARG--ARPVL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
++GD + L +ER Y A+ V D S P+ +A
Sbjct: 121 DHADAGDRRAAVVQ----LLDERHSLYDGADITV------------DTSGRAPLEVAEHI 164
Query: 239 LEQIE 243
L+ +
Sbjct: 165 LQALR 169
>gi|170717281|ref|YP_001784396.1| shikimate kinase [Haemophilus somnus 2336]
gi|189046332|sp|B0UTE7.1|AROK_HAES2 RecName: Full=Shikimate kinase; Short=SK
gi|168825410|gb|ACA30781.1| Shikimate kinase [Haemophilus somnus 2336]
gi|222836392|gb|EEE74799.1| shikimate kinase [Populus trichocarpa]
Length = 175
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 83/145 (57%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ +LG F D D IEQ G ++ IF + GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQILGMEFIDTDAEIEQRA-GADISWIFDVEGEEGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ + +V+STGGGA+ N Y+ +G ++L+ +E QR RP
Sbjct: 64 ERIINELTQKQGIVLSTGGGAIVSKDNRNYLSARGTVIYLETTVEKQFQRTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL E E L ++ + L+EE
Sbjct: 122 LLQNVEDPRQVLEDLAKVRNPLYEE 146
>gi|308177504|ref|YP_003916910.1| shikimate kinase [Arthrobacter arilaitensis Re117]
gi|307744967|emb|CBT75939.1| shikimate kinase [Arthrobacter arilaitensis Re117]
Length = 162
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 14/146 (9%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL+G M SGK+TVGK L+ L SF D D I GT +A+IF +GEG FR+ E +
Sbjct: 2 IYLIGPMASGKSTVGKSLASALSTSFADSDATIVAH-HGT-IAQIFAEHGEGHFRDLEVQ 59
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
L +L R VV+TGGGAV R N + + +G ++L++ A A+RI G RPLL
Sbjct: 60 ALCRL---RTGVVATGGGAVLREENQQLLSRGTVIYLELGEAAAAERIK--GDGHRPLL- 113
Query: 180 QCESGDAYTEALNRLSTLWEERGEAY 205
+GD EALN ++E+R Y
Sbjct: 114 ---AGD---EALNSWIAVYEKRRAIY 133
>gi|288553367|ref|YP_003425302.1| shikimate kinase [Bacillus pseudofirmus OF4]
gi|288544527|gb|ADC48410.1| shikimate kinase [Bacillus pseudofirmus OF4]
Length = 166
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 89/160 (55%), Gaps = 7/160 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL G MGSGKTTVG+ L LGY D D IE+ + EIF GE FR ET
Sbjct: 5 IYLTGFMGSGKTTVGQALGKALGYQVIDTDQWIEED-QQKKIKEIFNEGGEKLFRSLETA 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
L++L+ ++ V++TGGG + + N + M+ G ++LD +E + +R + DSRPLL
Sbjct: 64 ALRELT-QKKAVITTGGGIILKEENRQIMKGSGTVIFLDCAIEEVIRRTS--NDDSRPLL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
+ GD + +RL L++E + + + R LE +A
Sbjct: 121 KEKSKGDIQSMYEDRLP-LYKE-ADIHLDTTGRSILEIVA 158
>gi|255525073|ref|ZP_05392018.1| Shikimate kinase [Clostridium carboxidivorans P7]
gi|255511226|gb|EET87521.1| Shikimate kinase [Clostridium carboxidivorans P7]
Length = 170
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 15/149 (10%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I L+GM GSGKTT+GKIL L F D D IE +G ++ +IFK GE +FR+ E
Sbjct: 10 KNIVLIGMPGSGKTTIGKILYEKLRTDFIDMDDYIEDR-EGKTIPDIFK-NGEDYFRKLE 67
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
E + ++S + ++STGGG + N ++K GI +++D P+E +AQ I + SRP
Sbjct: 68 KEAVCEVSTKKSAIISTGGGVIKNFSNIENLKKNGIVIFIDRPVENIAQDINVL---SRP 124
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAY 205
LL + + +L L +ER E Y
Sbjct: 125 LLK---------DGVGKLYELLDERYELY 144
>gi|407975243|ref|ZP_11156149.1| shikimate kinase [Nitratireductor indicus C115]
gi|407429328|gb|EKF42006.1| shikimate kinase [Nitratireductor indicus C115]
Length = 207
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 89/167 (53%), Gaps = 11/167 (6%)
Query: 51 IEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGE 110
I L R I VG+MG+GKT +G+ ++ +LG +F D D IE +V +VA++F YGE
Sbjct: 15 IAQKLGNRSIVFVGLMGAGKTVIGRKVAEMLGLAFIDSDHEIE-TVSRMTVADLFSSYGE 73
Query: 111 GFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAA 169
FR E V+ +L VVSTGGGA R + ++GIS+WL L L +R+
Sbjct: 74 AEFRSLERRVIARLLKSGPRVVSTGGGAFVNAQTRRAVARRGISIWLKADLPTLMERVGR 133
Query: 170 VGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
T RPLL+ + E++ R L +ER YA A+ V N
Sbjct: 134 KST--RPLLNNQDP-----ESVMR--RLMDERYPLYAEADIVVHSRN 171
>gi|403049754|ref|ZP_10904238.1| shikimate kinase I [SAR86 cluster bacterium SAR86D]
Length = 169
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 83/157 (52%), Gaps = 4/157 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I++VG MGSGK+TVGKI+S L +FFD D IE S G S+ IF L GE FR++E +
Sbjct: 3 IFIVGPMGSGKSTVGKIISSELFLNFFDTDEEIE-SRTGASIDWIFDLEGEEGFRKRENQ 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+++ +V+STGGG + N + +G +L P+E +R + RPLL
Sbjct: 62 ILEEMVQQNSIVLSTGGGIILSESNRELLSSRGTVFYLATPIEVQLERTSK--DKDRPLL 119
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLE 215
+ G E L+EE + N + S E
Sbjct: 120 KNGDPGKILKELHEARENLYEEVSDYIVNTQGKSSQE 156
>gi|114321908|ref|YP_743591.1| shikimate kinase [Alkalilimnicola ehrlichii MLHE-1]
gi|114228302|gb|ABI58101.1| shikimate kinase [Alkalilimnicola ehrlichii MLHE-1]
Length = 179
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 80/134 (59%), Gaps = 7/134 (5%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL+G MG+GK+TVG+ L+ LG F D D I + G + IF + GE FR++E +
Sbjct: 7 IYLIGPMGAGKSTVGRRLADALGLPFEDSDRYIVERT-GVDIPTIFDIEGEAGFRKREHD 65
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD-SRPL 177
++ L+ +LV++TGGG VT P N + +GI V+L P+E ++A G D +RPL
Sbjct: 66 AIRTLTEREELVLATGGGVVTTPANRDLLGARGIVVYLYTPVET---QLARTGKDRNRPL 122
Query: 178 LHQCESGDAYTEAL 191
L Q E A EAL
Sbjct: 123 L-QTEDPRARLEAL 135
>gi|365174517|ref|ZP_09361965.1| hypothetical protein HMPREF1006_01668 [Synergistes sp. 3_1_syn1]
gi|363615073|gb|EHL66545.1| hypothetical protein HMPREF1006_01668 [Synergistes sp. 3_1_syn1]
Length = 551
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I LVGM GSGK VGK L+ +G ++D D LIE+ +G S EIF GE +FR+ E
Sbjct: 381 RNIVLVGMPGSGKNAVGKALALQIGMDYYDTDALIEER-EGMSTTEIFAKKGEKYFRDAE 439
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
TE+ +++S + V+STGGG + R N R +++ G +++ P+E + +A+V +RP
Sbjct: 440 TEIAKEVSCLGGAVISTGGGTMMRQENARALRRTGYVFFVNRPVEEI---LASVDLSNRP 496
Query: 177 LL 178
LL
Sbjct: 497 LL 498
>gi|410460581|ref|ZP_11314256.1| shikimate kinase [Bacillus azotoformans LMG 9581]
gi|409926839|gb|EKN63991.1| shikimate kinase [Bacillus azotoformans LMG 9581]
Length = 164
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 88/160 (55%), Gaps = 13/160 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I+L G MGSGKTT+GK+LS L D D +IE+ ++ T + +IF+ GE FRE E
Sbjct: 2 KSIFLTGFMGSGKTTIGKLLSEKLSLPVIDTDHVIEEKLNKT-IRDIFETEGENKFREYE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+ L+ + ++++TGGG + R N +M+K G+ V+L E + R+A G +RP
Sbjct: 61 HQFLEMMP-TENMIITTGGGIILRKENRDWMKKNGVVVYLHCEPEEILNRLA--GDQTRP 117
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
LL GD L +++ ER Y A+ +V N
Sbjct: 118 LL----DGDKKKNVL----SIFTERSPFYHEADFKVDTTN 149
>gi|419839439|ref|ZP_14362846.1| shikimate kinase 1 [Haemophilus haemolyticus HK386]
gi|386909299|gb|EIJ73974.1| shikimate kinase 1 [Haemophilus haemolyticus HK386]
Length = 180
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 85/145 (58%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMDFIDSDAVIEERT-GADISWIFDLEGEEGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ M+ +V+STGGGAV + Y+ +GI ++L+ +E QR RP
Sbjct: 64 ERIINELTQMQGIVLSTGGGAVLSKESRNYLSARGIVIYLETTVEKQFQRTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL E+ E L ++ + L+EE
Sbjct: 122 LLQDAENPRQVLEDLAKIRNPLYEE 146
>gi|255067347|ref|ZP_05319202.1| shikimate kinase [Neisseria sicca ATCC 29256]
gi|255048498|gb|EET43962.1| shikimate kinase [Neisseria sicca ATCC 29256]
Length = 173
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 89/150 (59%), Gaps = 11/150 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G+MG+GKTT+G+ ++ +L F+D D I + G S+ IF++ GE FR +ET
Sbjct: 11 LILIGLMGAGKTTLGRYIAQMLDRPFYDSDHEI-CTASGVSIPIIFEMEGEQGFRNRETA 69
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+KL+ M+ +++STGGG+V R N + M++ G+ V+L E L +R +SRPLL
Sbjct: 70 MLKKLTAMKDIILSTGGGSVLREENRQNMRRNGMVVYLHASPEVLLERTRY--DNSRPLL 127
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANA 208
Q E+ L +L L+ R Y N
Sbjct: 128 -QVEN------PLAKLQELYNARDPLYRNT 150
>gi|385851907|ref|YP_005898422.1| shikimate kinase [Neisseria meningitidis M04-240196]
gi|421559782|ref|ZP_16005650.1| shikimate kinase [Neisseria meningitidis 92045]
gi|421561832|ref|ZP_16007669.1| shikimate kinase family protein [Neisseria meningitidis NM2657]
gi|421568301|ref|ZP_16014027.1| shikimate kinase [Neisseria meningitidis NM3001]
gi|433522547|ref|ZP_20479230.1| shikimate kinase family protein [Neisseria meningitidis 61103]
gi|254670034|emb|CBA04828.1| shikimate kinase I [Neisseria meningitidis alpha153]
gi|325206730|gb|ADZ02183.1| shikimate kinase [Neisseria meningitidis M04-240196]
gi|402334548|gb|EJU69832.1| shikimate kinase [Neisseria meningitidis 92045]
gi|402336217|gb|EJU71478.1| shikimate kinase family protein [Neisseria meningitidis NM2657]
gi|402342029|gb|EJU77200.1| shikimate kinase [Neisseria meningitidis NM3001]
gi|432257736|gb|ELL13030.1| shikimate kinase family protein [Neisseria meningitidis 61103]
Length = 170
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 20/176 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+G+ I L+G+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR
Sbjct: 4 FNGKLI-LIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAVAA-GVPIPTIFEMEGEQGFR 61
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
+ET +L+KL ++ +V+STGGGAV + N ++K G V+L P E L +R +
Sbjct: 62 SRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DN 119
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 221
SRPLL + L +L L+ R Y +AN R +++ + +L
Sbjct: 120 SRPLLQ-------VADPLAKLRELYAARDPVYRQTADFTVESANCRQTVQTLLKRL 168
>gi|134096275|ref|YP_001101350.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Herminiimonas arsenicoxydans]
gi|133740178|emb|CAL63229.1| bifunctional protein [Includes: 3-dehydroquinate synthase ;
shikimate kinase] [Herminiimonas arsenicoxydans]
Length = 554
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 107/192 (55%), Gaps = 13/192 (6%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
G I+LVG+MG+GKTTVG+ L+ L F D D IE G ++ IF++ GE FR++
Sbjct: 2 GGNIFLVGLMGAGKTTVGRALAKRLNKQFIDSDHEIEART-GAAIPLIFEIEGEASFRQR 60
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSR 175
E EV++ L+ + +V++TGGGAV N Y++ +G ++L + L QR + +R
Sbjct: 61 EAEVIRDLTAQQDIVLATGGGAVLNAENRAYLKSRGTVIYLRASVNNLLQRTSH--DKNR 118
Query: 176 PLLHQCESGDAYT--EALNRL-STLWEERGEAYANA---NARVSLENIAVKLGHKDVSSL 229
PLL ++GD E L+R+ L+ E + + N + +++I +LG + S
Sbjct: 119 PLL---QTGDPRKTLEELSRIREPLYNEIADIVIDTGRPNVQFLMQSILAQLGPEHTQSA 175
Query: 230 TPVTIAIEALEQ 241
T V++ + L +
Sbjct: 176 TAVSLQQDLLSK 187
>gi|304388334|ref|ZP_07370447.1| shikimate kinase [Neisseria meningitidis ATCC 13091]
gi|385339442|ref|YP_005893314.1| shikimate kinase [Neisseria meningitidis G2136]
gi|416164228|ref|ZP_11607160.1| shikimate kinase [Neisseria meningitidis N1568]
gi|416179598|ref|ZP_11611034.1| shikimate kinase [Neisseria meningitidis M6190]
gi|416193192|ref|ZP_11617069.1| shikimate kinase [Neisseria meningitidis ES14902]
gi|416207532|ref|ZP_11620930.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|416207609|ref|ZP_11620949.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|416207661|ref|ZP_11620967.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|421541107|ref|ZP_15987237.1| shikimate kinase [Neisseria meningitidis 93004]
gi|421547171|ref|ZP_15993209.1| shikimate kinase [Neisseria meningitidis NM183]
gi|421553376|ref|ZP_15999339.1| shikimate kinase [Neisseria meningitidis NM576]
gi|421562701|ref|ZP_16008524.1| shikimate kinase [Neisseria meningitidis NM2795]
gi|421906296|ref|ZP_16336196.1| Shikimate kinase [Neisseria meningitidis alpha704]
gi|433467856|ref|ZP_20425305.1| shikimate kinase family protein [Neisseria meningitidis 87255]
gi|433469942|ref|ZP_20427350.1| shikimate kinase family protein [Neisseria meningitidis 98080]
gi|433474128|ref|ZP_20431484.1| shikimate kinase family protein [Neisseria meningitidis 97021]
gi|433481503|ref|ZP_20438770.1| shikimate kinase family protein [Neisseria meningitidis 2006087]
gi|433484565|ref|ZP_20441784.1| shikimate kinase family protein [Neisseria meningitidis 2002038]
gi|433485552|ref|ZP_20442755.1| shikimate kinase family protein [Neisseria meningitidis 97014]
gi|433493165|ref|ZP_20450251.1| shikimate kinase family protein [Neisseria meningitidis NM586]
gi|433495249|ref|ZP_20452311.1| shikimate kinase family protein [Neisseria meningitidis NM762]
gi|433497381|ref|ZP_20454410.1| shikimate kinase family protein [Neisseria meningitidis M7089]
gi|433497967|ref|ZP_20454983.1| shikimate kinase family protein [Neisseria meningitidis M7124]
gi|433501469|ref|ZP_20458450.1| shikimate kinase family protein [Neisseria meningitidis NM174]
gi|433503547|ref|ZP_20460503.1| shikimate kinase family protein [Neisseria meningitidis NM126]
gi|304337651|gb|EFM03807.1| shikimate kinase [Neisseria meningitidis ATCC 13091]
gi|325127560|gb|EGC50483.1| shikimate kinase [Neisseria meningitidis N1568]
gi|325131460|gb|EGC54167.1| shikimate kinase [Neisseria meningitidis M6190]
gi|325137567|gb|EGC60148.1| shikimate kinase [Neisseria meningitidis ES14902]
gi|325141615|gb|EGC64077.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|325141648|gb|EGC64109.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|325141681|gb|EGC64141.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|325197686|gb|ADY93142.1| shikimate kinase [Neisseria meningitidis G2136]
gi|393292597|emb|CCI72115.1| Shikimate kinase [Neisseria meningitidis alpha704]
gi|402315900|gb|EJU51454.1| shikimate kinase [Neisseria meningitidis 93004]
gi|402321534|gb|EJU57007.1| shikimate kinase [Neisseria meningitidis NM183]
gi|402328284|gb|EJU63661.1| shikimate kinase [Neisseria meningitidis NM576]
gi|402342085|gb|EJU77254.1| shikimate kinase [Neisseria meningitidis NM2795]
gi|432201408|gb|ELK57489.1| shikimate kinase family protein [Neisseria meningitidis 87255]
gi|432201535|gb|ELK57615.1| shikimate kinase family protein [Neisseria meningitidis 98080]
gi|432208007|gb|ELK63989.1| shikimate kinase family protein [Neisseria meningitidis 97021]
gi|432218260|gb|ELK74123.1| shikimate kinase family protein [Neisseria meningitidis 2006087]
gi|432219651|gb|ELK75487.1| shikimate kinase family protein [Neisseria meningitidis 2002038]
gi|432224041|gb|ELK79814.1| shikimate kinase family protein [Neisseria meningitidis 97014]
gi|432226768|gb|ELK82491.1| shikimate kinase family protein [Neisseria meningitidis NM586]
gi|432228573|gb|ELK84272.1| shikimate kinase family protein [Neisseria meningitidis NM762]
gi|432232251|gb|ELK87899.1| shikimate kinase family protein [Neisseria meningitidis M7089]
gi|432233310|gb|ELK88938.1| shikimate kinase family protein [Neisseria meningitidis NM174]
gi|432236734|gb|ELK92338.1| shikimate kinase family protein [Neisseria meningitidis M7124]
gi|432239017|gb|ELK94577.1| shikimate kinase family protein [Neisseria meningitidis NM126]
Length = 170
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 20/176 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+G+ I L+G+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR
Sbjct: 4 FNGKLI-LIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFR 61
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
+ET +L+KL ++ +V+STGGGAV + N ++K G V+L P E L +R +
Sbjct: 62 SRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPEILLERTRC--DN 119
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 221
SRPLL + L +L L+ R Y +AN R +++ + +L
Sbjct: 120 SRPLLQ-------VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 168
>gi|121634272|ref|YP_974517.1| shikimate kinase [Neisseria meningitidis FAM18]
gi|120865978|emb|CAM09715.1| putative shikimate kinase [Neisseria meningitidis FAM18]
Length = 171
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 20/176 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+G+ I L+G+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR
Sbjct: 5 FNGKLI-LIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFR 62
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
+ET +L+KL ++ +V+STGGGAV + N ++K G V+L P E L +R +
Sbjct: 63 SRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPEILLERTRC--DN 120
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 221
SRPLL + L +L L+ R Y +AN R +++ + +L
Sbjct: 121 SRPLLQ-------VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 169
>gi|415885484|ref|ZP_11547412.1| shikimate kinase [Bacillus methanolicus MGA3]
gi|387591153|gb|EIJ83472.1| shikimate kinase [Bacillus methanolicus MGA3]
Length = 167
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ IYL+G MGSGKTTVGK +S + FD D +E+ V S+ +IF+ GE FFR E
Sbjct: 2 KAIYLIGFMGSGKTTVGKSMSAKWNWPVFDTDEELEKKVK-KSINQIFEENGEEFFRLLE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+E+L+++ + R +++TGGG V + N R+M++ G+ V+L E + +RI DSRP
Sbjct: 61 SEILKQMPVNRS-IITTGGGIVLKEENRRWMKENGVVVFLYAEPEEIFKRIE--NDDSRP 117
Query: 177 LLH 179
LL
Sbjct: 118 LLK 120
>gi|385324764|ref|YP_005879203.1| shikimate kinase [Neisseria meningitidis 8013]
gi|416174165|ref|ZP_11609126.1| shikimate kinase [Neisseria meningitidis OX99.30304]
gi|418288948|ref|ZP_12901356.1| shikimate kinase [Neisseria meningitidis NM233]
gi|418291207|ref|ZP_12903247.1| shikimate kinase [Neisseria meningitidis NM220]
gi|421543054|ref|ZP_15989154.1| shikimate kinase [Neisseria meningitidis NM255]
gi|433465796|ref|ZP_20423267.1| shikimate kinase family protein [Neisseria meningitidis NM422]
gi|433491169|ref|ZP_20448282.1| shikimate kinase family protein [Neisseria meningitidis NM418]
gi|254673577|emb|CBA09071.1| shikimate kinase I [Neisseria meningitidis alpha275]
gi|261393151|emb|CAX50763.1| shikimate kinase (SK) [Neisseria meningitidis 8013]
gi|325129553|gb|EGC52377.1| shikimate kinase [Neisseria meningitidis OX99.30304]
gi|372200258|gb|EHP14363.1| shikimate kinase [Neisseria meningitidis NM220]
gi|372200665|gb|EHP14707.1| shikimate kinase [Neisseria meningitidis NM233]
gi|402315816|gb|EJU51372.1| shikimate kinase [Neisseria meningitidis NM255]
gi|432200892|gb|ELK56980.1| shikimate kinase family protein [Neisseria meningitidis NM422]
gi|432225728|gb|ELK81468.1| shikimate kinase family protein [Neisseria meningitidis NM418]
Length = 170
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 20/176 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+G+ I L+G+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR
Sbjct: 4 FNGKLI-LIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAVAA-GVPIPTIFEMEGEQGFR 61
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
+ET +L+KL ++ +V+STGGGAV + N ++K G V+L P E L +R +
Sbjct: 62 SRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DN 119
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 221
SRPLL + L +L L+ R Y +AN R +++ + +L
Sbjct: 120 SRPLLQ-------VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 168
>gi|402756236|ref|ZP_10858492.1| shikimate kinase [Acinetobacter sp. NCTC 7422]
Length = 186
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 78/125 (62%), Gaps = 5/125 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET
Sbjct: 18 IYLVGPMGAGKTTVGRHLAELLGRDFIDSDHEIERKT-GATIPWIFEKEGEVGFRLRETN 76
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL L+ LV++TGGGA+T+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 77 VLNDLTSRSLLVLATGGGAITQSKNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL 134
Query: 179 HQCES 183
Q E+
Sbjct: 135 -QVEN 138
>gi|290476272|ref|YP_003469176.1| shikimate kinase [Xenorhabdus bovienii SS-2004]
gi|289175609|emb|CBJ82412.1| shikimate kinase II [Xenorhabdus bovienii SS-2004]
Length = 174
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 97/165 (58%), Gaps = 10/165 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ +++VG G+GKTT+GK+L+ L Y+F D D I Q+ G ++A++ + YG FRE E
Sbjct: 3 QTLFIVGARGAGKTTIGKLLAEALSYTFIDTDESI-QAFCGMTIADLVEQYGWTHFRELE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDS-R 175
+++L+ S + V+STGGG + N +YMQ+ GI V+L P E L +R++ ++ R
Sbjct: 62 SQILKNAS-QNKCVISTGGGMILSSENRQYMQQNGIVVYLQAPAEVLIKRLSLNPENTQR 120
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYAN--ANARVSLENIA 218
P L +G + TE + + T E+ AN +A S ENI+
Sbjct: 121 PSL----TGKSITEEIESILTEREQLYRECANFIVDANSSTENIS 161
>gi|59800554|ref|YP_207266.1| shikimate kinase [Neisseria gonorrhoeae FA 1090]
gi|240013408|ref|ZP_04720321.1| shikimate kinase [Neisseria gonorrhoeae DGI18]
gi|240015849|ref|ZP_04722389.1| shikimate kinase [Neisseria gonorrhoeae FA6140]
gi|240120478|ref|ZP_04733440.1| shikimate kinase [Neisseria gonorrhoeae PID24-1]
gi|254493003|ref|ZP_05106174.1| shikimate kinase [Neisseria gonorrhoeae 1291]
gi|75432610|sp|Q5FAD3.1|AROK_NEIG1 RecName: Full=Shikimate kinase; Short=SK
gi|59717449|gb|AAW88854.1| putative shikimate kinase [Neisseria gonorrhoeae FA 1090]
gi|226512043|gb|EEH61388.1| shikimate kinase [Neisseria gonorrhoeae 1291]
Length = 170
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 20/176 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+G+ I L+G+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR
Sbjct: 4 FNGKLI-LIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFR 61
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
+ET +L+KL ++ +V+STGGGAV + N ++K G V+L P E L +R +
Sbjct: 62 SRETAILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DN 119
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 221
SRPLL + L +L L+ R Y +AN R +++ + +L
Sbjct: 120 SRPLLQ-------VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 168
>gi|338972213|ref|ZP_08627589.1| shikimate kinase I [Bradyrhizobiaceae bacterium SG-6C]
gi|338234605|gb|EGP09719.1| shikimate kinase I [Bradyrhizobiaceae bacterium SG-6C]
Length = 204
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Query: 46 NKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIF 105
+ +I L GR + LVGMMGSGK+T+G+ L L F D D IE + G +V+EIF
Sbjct: 13 TREADIVAALHGRPVVLVGMMGSGKSTIGRRLGARLHLPFLDADHEIEVAHAGMTVSEIF 72
Query: 106 KLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALA 164
+GE +FR+ E V+ +L V++TGGGA R R K +S+WL + +
Sbjct: 73 AQHGEPYFRDGEARVIARLLEGGSCVIATGGGAFMREETRNRIHDKAVSIWLKADGDVIL 132
Query: 165 QRIAAVGTDSRPLL 178
+R+ RPLL
Sbjct: 133 KRVKRRA--DRPLL 144
>gi|357030853|ref|ZP_09092797.1| shikimate kinase [Gluconobacter morbifer G707]
gi|356415547|gb|EHH69190.1| shikimate kinase [Gluconobacter morbifer G707]
Length = 563
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 76/127 (59%), Gaps = 10/127 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I L+GMMG GKTT+G+ L+ G F D D+ IE++ G S+ EIF +GE FR+ E
Sbjct: 24 RTIVLIGMMGVGKTTIGRRLAQFYGLPFVDADSEIERAA-GCSIPEIFARHGEASFRDGE 82
Query: 118 TEVLQKLSLMRQLVVSTGGG----AVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
V+Q+L +++TGGG A TR I Q+ +S+WL P+ L +R+++ G
Sbjct: 83 RRVIQRLLDGPPCLLATGGGAWMDAQTRHI---VRQQAVSIWLKAPVHVLLKRVSSRG-- 137
Query: 174 SRPLLHQ 180
RPLL Q
Sbjct: 138 GRPLLAQ 144
>gi|238025977|ref|YP_002910208.1| Shikimate kinase [Burkholderia glumae BGR1]
gi|237875171|gb|ACR27504.1| Shikimate kinase [Burkholderia glumae BGR1]
Length = 201
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 88/158 (55%), Gaps = 14/158 (8%)
Query: 49 QEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLY 108
Q +PY S ++ VG+MG+GKTTVG+ ++ L FFD D IE GT + IF+L
Sbjct: 19 QARDPYAS---VFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEART-GTRIPVIFELE 74
Query: 109 GEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRI 167
GE FR++E +++ +L+L +V++TGGGAV RP N ++ +GI ++L L R
Sbjct: 75 GETGFRDREEKMIHELTLRGNVVLATGGGAVMRPANRDALRSRGIVIYLRANPHDLWLRT 134
Query: 168 AAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
+RPLL Q E A RL L+E R Y
Sbjct: 135 RK--DKNRPLL-QTEDPKA------RLEALYEVRDPLY 163
>gi|194097716|ref|YP_002000757.1| shikimate kinase [Neisseria gonorrhoeae NCCP11945]
gi|268594081|ref|ZP_06128248.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Neisseria
gonorrhoeae 35/02]
gi|268596133|ref|ZP_06130300.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Neisseria
gonorrhoeae FA19]
gi|268598257|ref|ZP_06132424.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae MS11]
gi|268600606|ref|ZP_06134773.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID18]
gi|268602795|ref|ZP_06136962.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID1]
gi|268681390|ref|ZP_06148252.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID332]
gi|268683557|ref|ZP_06150419.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae SK-92-679]
gi|268685859|ref|ZP_06152721.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae SK-93-1035]
gi|293397708|ref|ZP_06641914.1| shikimate kinase [Neisseria gonorrhoeae F62]
gi|193933006|gb|ACF28830.1| AroK [Neisseria gonorrhoeae NCCP11945]
gi|268547470|gb|EEZ42888.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Neisseria
gonorrhoeae 35/02]
gi|268549921|gb|EEZ44940.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Neisseria
gonorrhoeae FA19]
gi|268582388|gb|EEZ47064.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae MS11]
gi|268584737|gb|EEZ49413.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID18]
gi|268586926|gb|EEZ51602.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID1]
gi|268621674|gb|EEZ54074.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID332]
gi|268623841|gb|EEZ56241.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae SK-92-679]
gi|268626143|gb|EEZ58543.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae SK-93-1035]
gi|291611654|gb|EFF40723.1| shikimate kinase [Neisseria gonorrhoeae F62]
Length = 171
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 20/176 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+G+ I L+G+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR
Sbjct: 5 FNGKLI-LIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFR 62
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
+ET +L+KL ++ +V+STGGGAV + N ++K G V+L P E L +R +
Sbjct: 63 SRETAILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DN 120
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 221
SRPLL + L +L L+ R Y +AN R +++ + +L
Sbjct: 121 SRPLLQ-------VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 169
>gi|110635393|ref|YP_675601.1| shikimate kinase [Chelativorans sp. BNC1]
gi|110286377|gb|ABG64436.1| shikimate kinase [Chelativorans sp. BNC1]
Length = 195
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 97/195 (49%), Gaps = 23/195 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I VG+MG+GKT VG+ ++G+LG F D D IE SV S+ E+F YGE FR
Sbjct: 20 LGRRSIVFVGLMGAGKTVVGRKVAGMLGLPFIDSDHEIE-SVSRMSIPELFAGYGEDEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWR-YMQKGISVWLDVPLEALAQRIAAVGTD 173
E V+ +L V+STGGGA + R +++G+SVWL L+ L QR+A
Sbjct: 79 ALERRVIARLLRDGPKVLSTGGGAFMSESSRRAILRQGVSVWLKADLDTLMQRVAK--RQ 136
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
RPLL D + R L E R Y A+ V + K+V
Sbjct: 137 DRPLLKT----DDPRAVMQR---LIEIRYPIYELADITVRTRD-----DPKEV------- 177
Query: 234 IAIEALEQIEGFLKE 248
IA E LE I FLK+
Sbjct: 178 IASEVLEGIAAFLKK 192
>gi|344940815|ref|ZP_08780103.1| Shikimate kinase [Methylobacter tundripaludum SV96]
gi|344262007|gb|EGW22278.1| Shikimate kinase [Methylobacter tundripaludum SV96]
Length = 174
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG+MG+GKTT+G+ L+ L F+D D IE+ G + IF+ GE FR++E +
Sbjct: 7 IYLVGLMGAGKTTIGRQLARALKLPFYDSDKAIEERT-GVDIPTIFEFEGEEGFRDREQK 65
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++Q+L+ M +V++TGGGA+ R N R +++ G V+L +E + +R RPLL
Sbjct: 66 MIQQLTQMEGIVLATGGGAILREENRRLLKENGFIVYLQCSVERILERTRR--DTQRPLL 123
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
D R+ +L+ +R Y
Sbjct: 124 KTDNPRD-------RIESLFAQREPLY 143
>gi|288817386|ref|YP_003431733.1| shikimate kinase [Hydrogenobacter thermophilus TK-6]
gi|384128156|ref|YP_005510769.1| shikimate kinase [Hydrogenobacter thermophilus TK-6]
gi|288786785|dbj|BAI68532.1| shikimate kinase [Hydrogenobacter thermophilus TK-6]
gi|308750993|gb|ADO44476.1| Shikimate kinase [Hydrogenobacter thermophilus TK-6]
Length = 169
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++L+G M SGK+T+GK L+ L + F D D + Q +G S+ EIF+L GE +FR++E E
Sbjct: 6 VFLIGFMCSGKSTIGKELAKSLSWKFCDLDEEV-QKEEGMSIKEIFELKGEDYFRKRELE 64
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL+ L L V+STGGG M++ G+ VWLDV +A QR V RPLL
Sbjct: 65 VLKLLVLEDNAVISTGGGLGANKEALELMKRHGLVVWLDVSFDAFLQRCKDV--QERPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 229
+ +L L L++ER + Y+ A+A + + K+ + + L
Sbjct: 123 KK---------SLGELKKLYQERKKIYSQAHAHIDTTDEPNKIAQRIIQIL 164
>gi|338980486|ref|ZP_08631758.1| 3-dehydroquinate synthase [Acidiphilium sp. PM]
gi|338208614|gb|EGO96461.1| 3-dehydroquinate synthase [Acidiphilium sp. PM]
Length = 536
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 85/153 (55%), Gaps = 11/153 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I L+G+MG+GK+ VG+ L+ L F D D IE + G +VA+IF GE FR +E
Sbjct: 2 RSIVLIGLMGAGKSAVGRRLAAQLALPFHDSDAEIEAAA-GKTVADIFASEGEAAFRARE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L +V++TGGGA P ++ + ISVWL L+ L R+ G RP
Sbjct: 61 RAMIAELLAGPPIVLATGGGAFMDPETRAVIRARAISVWLRATLDVLLARVR--GRTHRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LL+Q GD E L+RLS L R YA A+
Sbjct: 119 LLNQ---GDP-AEILSRLSAL---RAPVYAEAD 144
>gi|82701785|ref|YP_411351.1| shikimate kinase [Nitrosospira multiformis ATCC 25196]
gi|115312154|sp|Q2YBB2.1|AROK_NITMU RecName: Full=Shikimate kinase; Short=SK
gi|82409850|gb|ABB73959.1| shikimate kinase [Nitrosospira multiformis ATCC 25196]
Length = 195
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 83/142 (58%), Gaps = 4/142 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVGMMG+GKTTVG++LS L +F+D D I++ G S+ IF++ GE FR +ETE
Sbjct: 26 IFLVGMMGAGKTTVGRLLSHFLEKTFYDSDREIQKRT-GVSIPTIFEIEGEEGFRRRETE 84
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTDSRPLL 178
+L +L R ++++TGGGAV +N ++ G +V +L ++ L +R +RPLL
Sbjct: 85 ILSELMNARNIILATGGGAVLSGVNRAMLKHGGTVIYLRASIDDLWRRTRH--DKNRPLL 142
Query: 179 HQCESGDAYTEALNRLSTLWEE 200
+ E + L+ E
Sbjct: 143 QTSDPRARLAELFVQRDPLYRE 164
>gi|427431003|ref|ZP_18920699.1| Shikimate kinase I [Caenispirillum salinarum AK4]
gi|425878180|gb|EKV26899.1| Shikimate kinase I [Caenispirillum salinarum AK4]
Length = 200
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 53 PYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGF 112
P R + LVG+MG+GK+ VGK L+ L F D D +E++ G S+A+IF GE
Sbjct: 13 PLTLPRTVVLVGLMGAGKSVVGKRLAQRLHVPFIDADHEVEKAA-GQSIADIFATLGEDA 71
Query: 113 FREKETEVLQKLSLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVG 171
FRE E +V+ +L V++ GGGA P R ++GISVWL L+ L +R A G
Sbjct: 72 FREGERKVMARLLDGPVCVLAAGGGAFMCPETRRRVKRRGISVWLRADLDLLVRRTAGRG 131
Query: 172 TDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
RPLL+Q GD +L +L +R Y A+ V
Sbjct: 132 --HRPLLNQ---GDPRA----KLESLMAQRYPVYETADVTVD 164
>gi|399059737|ref|ZP_10745290.1| shikimate kinase [Novosphingobium sp. AP12]
gi|398039050|gb|EJL32195.1| shikimate kinase [Novosphingobium sp. AP12]
Length = 195
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 90/166 (54%), Gaps = 23/166 (13%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I LVGMMG GK++VGK L+ +L F D D IE+S T + E+F+ YGE +FR+ E
Sbjct: 22 RPIVLVGMMGVGKSSVGKRLATLLDCPFVDADDEIERSAQMT-IPEMFEAYGEDYFRDGE 80
Query: 118 TEVLQKLSLMRQ------LVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRI 167
V+ +L R+ +V++TGGGA TR + + K I+VWLD L+ L +R
Sbjct: 81 RRVIARLVTEREASPRPRIVIATGGGAFCNAETRAL---ILDKAITVWLDSELDTLVERT 137
Query: 168 AAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
A ++RPLL G E L RL ER + Y A V+
Sbjct: 138 AR--KENRPLLQ----GGNPREILARLRA---EREQHYRQAPIHVT 174
>gi|392961683|ref|ZP_10327138.1| Shikimate kinase [Pelosinus fermentans DSM 17108]
gi|421055597|ref|ZP_15518559.1| shikimate kinase [Pelosinus fermentans B4]
gi|421058775|ref|ZP_15521433.1| Shikimate kinase [Pelosinus fermentans B3]
gi|421067547|ref|ZP_15529011.1| Shikimate kinase [Pelosinus fermentans A12]
gi|421072617|ref|ZP_15533726.1| Shikimate kinase [Pelosinus fermentans A11]
gi|392439362|gb|EIW17073.1| shikimate kinase [Pelosinus fermentans B4]
gi|392445817|gb|EIW23128.1| Shikimate kinase [Pelosinus fermentans A11]
gi|392449172|gb|EIW26322.1| Shikimate kinase [Pelosinus fermentans A12]
gi|392453523|gb|EIW30399.1| Shikimate kinase [Pelosinus fermentans DSM 17108]
gi|392460183|gb|EIW36517.1| Shikimate kinase [Pelosinus fermentans B3]
Length = 177
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 88/147 (59%), Gaps = 15/147 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+GM GSGKT++G I++ L F+D D I++ + +++E+F L GE FR+ E+
Sbjct: 7 VVLIGMPGSGKTSLGSIIAERLEIDFYDIDQYIQEK-ENKTISELF-LLGESHFRQIESN 64
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++++S + +V++TGGG VTRP N + QKG ++D P+E + + I A +RPLL
Sbjct: 65 AVREVSSKKPIVIATGGGVVTRPENIAVLQQKGTIFYIDRPIEMIIETIDAA---ARPLL 121
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ + R+ +L+E+R Y
Sbjct: 122 E---------DNVKRIYSLYEQRKHLY 139
>gi|386829469|ref|ZP_10116576.1| shikimate kinase [Beggiatoa alba B18LD]
gi|386430353|gb|EIJ44181.1| shikimate kinase [Beggiatoa alba B18LD]
Length = 179
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 95/163 (58%), Gaps = 12/163 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVG+MG GKTT+G+ L+ L F D D IE+ G SV+ IF++ GE FR++ET
Sbjct: 11 IFLVGLMGVGKTTIGRQLATALDVPFKDSDKEIEERT-GASVSLIFEVEGEAGFRKRETA 69
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ +L+ + +V++TGGGA+ N + +Q +G+ V+L ++ L +R + + +RPLL
Sbjct: 70 MIAELTAQKGIVLATGGGAILSEENRKCLQDRGLVVYLHASVDELFRRTSH--SRNRPLL 127
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYAN-ANARVSLENIAVK 220
+ RL TL+ ER Y + A+ V E+ VK
Sbjct: 128 ETANPRE-------RLETLFNERHPFYKSIADLVVDTEHHTVK 163
>gi|332289550|ref|YP_004420402.1| shikimate kinase I [Gallibacterium anatis UMN179]
gi|330432446|gb|AEC17505.1| shikimate kinase I [Gallibacterium anatis UMN179]
Length = 175
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 84/145 (57%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+L+G MG+GK+T+G+ L+ +L F D DT IEQ G + IF + GE FR++E
Sbjct: 5 RNIFLIGPMGAGKSTIGRQLAQLLSMDFVDSDTEIEQRA-GADIGWIFDVEGEEGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ + +V+STGGGAV N ++ +GI ++L+ +E QR + RP
Sbjct: 64 ERIINELTQRQGIVLSTGGGAVMSKENRNHLSARGIVIYLETTVEKQHQR--TLRDKKRP 121
Query: 177 LLHQCESGDAYTEALNRLST-LWEE 200
LL E E L ++ T L+EE
Sbjct: 122 LLQGVEDPRKVLEDLAKIRTPLYEE 146
>gi|332185313|ref|ZP_08387062.1| shikimate kinase family protein [Sphingomonas sp. S17]
gi|332015037|gb|EGI57093.1| shikimate kinase family protein [Sphingomonas sp. S17]
Length = 180
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 17/162 (10%)
Query: 56 SGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFRE 115
+G I LVG+MG GK+TVG+ L+ L F D D IE++ G SV EIF+ +GE +FR+
Sbjct: 13 TGSPIVLVGLMGVGKSTVGRRLANRLRVPFVDADHAIEEAA-GMSVTEIFEQFGEPYFRD 71
Query: 116 KETEVLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVG 171
E V+ +L R V++TGGGA TR + +++ ++WL+ E LA+R+
Sbjct: 72 GERRVIARLVDGRPKVIATGGGAFINDETRAL---ILEQATAIWLNASPEVLAERVRR-- 126
Query: 172 TDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
D+RPLL G + L LS + R YA A VS
Sbjct: 127 RDTRPLLR----GKDPLKVLRELSAV---RNPIYALAPIHVS 161
>gi|425743417|ref|ZP_18861499.1| shikimate kinase 1 [Acinetobacter baumannii WC-323]
gi|425494282|gb|EKU60495.1| shikimate kinase 1 [Acinetobacter baumannii WC-323]
Length = 180
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 75/121 (61%), Gaps = 4/121 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET
Sbjct: 12 IYLVGPMGAGKTTVGRHLAELLGRDFIDSDHEIERKT-GATIPWIFEKEGEVGFRLRETN 70
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL L+ LV++TGGGAVT+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 71 VLNDLTSRPLLVLATGGGAVTQVKNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL 128
Query: 179 H 179
Sbjct: 129 Q 129
>gi|261401671|ref|ZP_05987796.1| shikimate kinase [Neisseria lactamica ATCC 23970]
gi|269208255|gb|EEZ74710.1| shikimate kinase [Neisseria lactamica ATCC 23970]
Length = 170
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 83/147 (56%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR +ET
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFRSRETA 66
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+KL ++ +V+STGGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 67 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLL 124
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ L +L L+ R Y
Sbjct: 125 Q-------VADPLGKLRELYAARDPVY 144
>gi|84686926|ref|ZP_01014810.1| shikimate kinase [Maritimibacter alkaliphilus HTCC2654]
gi|84665123|gb|EAQ11603.1| shikimate kinase [Rhodobacterales bacterium HTCC2654]
Length = 181
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 89/162 (54%), Gaps = 5/162 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + +VGMMG+GK+ VGK L+ LG F D D IE + + T +AE+F+ GE FFR++E
Sbjct: 7 KPVTVVGMMGAGKSAVGKALATRLGVPFLDSDAEIEAAANMT-IAEVFQRDGEAFFRDRE 65
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
EV+ +L +V+STGGGA N + G+S+WL L+ L QR+ T RP
Sbjct: 66 AEVIARLLSTGPIVLSTGGGAFLAERNRDAISAAGVSLWLRADLDLLWQRVRHKTT--RP 123
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
LL + E ++ + A+A+ + S+ ++A
Sbjct: 124 LLRTADPKKTLAEIYAARQPIY-ALADLVADADPKYSISDMA 164
>gi|315500432|ref|YP_004089235.1| shikimate kinase [Asticcacaulis excentricus CB 48]
gi|315418444|gb|ADU15084.1| Shikimate kinase [Asticcacaulis excentricus CB 48]
Length = 186
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 5/148 (3%)
Query: 44 LKNKSQEIEPYLS-GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVA 102
+ S+ EP L R + LVG+MG GKTTVG+ L+ L F D D IE++ G SV+
Sbjct: 1 MPETSKSTEPRLILPRPVALVGLMGVGKTTVGRRLAEALAVPFRDADEEIEKAA-GLSVS 59
Query: 103 EIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLE 161
+IF +GE FR+ E +V+ +L +++TGGGA +P + QK ++VWL L
Sbjct: 60 DIFAAFGEAGFRDGEQKVISRLLDDGPQILATGGGAFVQPATHDIIRQKAVTVWLKTDLR 119
Query: 162 ALAQRIAAVGTDSRPLLHQCESGDAYTE 189
+A+R+A + RPLL + + E
Sbjct: 120 VIARRVA--NRNHRPLLRDRDPMEVLRE 145
>gi|343518199|ref|ZP_08755193.1| shikimate kinase 1 [Haemophilus pittmaniae HK 85]
gi|343393995|gb|EGV06545.1| shikimate kinase 1 [Haemophilus pittmaniae HK 85]
Length = 180
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 85/145 (58%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLKMDFLDSDAVIEERA-GADISWIFDLEGEEGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
+++ +L+ M+ +V+STGGGA+ N Y+ +GI ++L ++ QR +RP
Sbjct: 64 EKIINELTQMQGIVLSTGGGAIMSKENRNYLSARGIVIYLQTTVDKQYQRTQR--DKNRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL E E L ++ + L+EE
Sbjct: 122 LLQGAEDPRQVLEDLAKIRNPLYEE 146
>gi|300024675|ref|YP_003757286.1| 3-dehydroquinate synthase [Hyphomicrobium denitrificans ATCC 51888]
gi|299526496|gb|ADJ24965.1| 3-dehydroquinate synthase [Hyphomicrobium denitrificans ATCC 51888]
Length = 564
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 85/159 (53%), Gaps = 11/159 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I LVG+MG GK+++GK L+ LG F D D IE++ T + EIF +GE FR
Sbjct: 14 LGKRSIVLVGLMGCGKSSIGKRLAARLGLPFIDADEEIERAAAKT-INEIFADHGEAHFR 72
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
+ E +V+ +L V++TGGGA P R + G+S+WL L L +R+ + D
Sbjct: 73 DGERKVISRLLSNGPQVLATGGGAYMHPETRQRIRENGVSIWLRADLPVLMRRV--MKRD 130
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
+RPLL + EA R L E R YA A+ V
Sbjct: 131 TRPLLRE-----GNPEATMR--KLIEARYPIYAEADMTV 162
>gi|182677351|ref|YP_001831497.1| shikimate kinase., 3-dehydroquinate synthase [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182633234|gb|ACB94008.1| Shikimate kinase., 3-dehydroquinate synthase [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 593
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 33 NVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLI 92
++ P E ++ I L R + LVG+MGSGKT+ G+ L+ LG F D D I
Sbjct: 7 SISPPQQEYAPDDRRAHSIISSLGSRSLVLVGLMGSGKTSTGRRLAQRLGLPFVDADVEI 66
Query: 93 EQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKG 151
E S G +++EIF +GE +FR+ E V+ +L +++TGGGA + R +KG
Sbjct: 67 E-SAAGMTISEIFARHGEDYFRDGERRVMARLLADGPKILATGGGAFMNEETRSRIAEKG 125
Query: 152 ISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANAR 211
+S+WL + L +R+ RPLL E + L+R L E+R YA A+
Sbjct: 126 VSIWLKADPDVLWRRVKK--RPHRPLLQTREP----EKTLHR---LMEQRYPIYARADIA 176
Query: 212 V 212
V
Sbjct: 177 V 177
>gi|381204727|ref|ZP_09911798.1| shikimate kinase [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 164
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 73/122 (59%), Gaps = 4/122 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MG+GKTTVG+ L+ LGY F D D IE+ G ++ EIF+ GE FR+ ET+
Sbjct: 3 IILIGFMGAGKTTVGRKLANRLGYFFLDTDQQIEKQ-QGCTIEEIFRYAGEATFRDLETK 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+ L +R ++STGGG R N ++ G +V+L V L QR+ +RPLL
Sbjct: 62 LLENLQSVRNTILSTGGGMFIRSKNQELLKDIGKTVYLQVDRGTLEQRLQC--DLNRPLL 119
Query: 179 HQ 180
Q
Sbjct: 120 QQ 121
>gi|422110913|ref|ZP_16380768.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378401|emb|CBX22954.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 170
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 83/147 (56%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR +ET
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGERGFRSRETA 66
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+KL ++ +V+STGGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 67 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLL 124
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ L +L L+ R Y
Sbjct: 125 Q-------VADPLGKLRELYAARDPVY 144
>gi|392965802|ref|ZP_10331221.1| Shikimate kinase [Fibrisoma limi BUZ 3]
gi|387844866|emb|CCH53267.1| Shikimate kinase [Fibrisoma limi BUZ 3]
Length = 160
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 65 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 124
M SGKTT+GK ++ L Y F D D I + +G ++ +IF GE +FRE E VL K+
Sbjct: 1 MPSSGKTTLGKRIAEALHYRFVDTDKRIVRE-EGRTINDIFAQSGESYFREAERRVLCKI 59
Query: 125 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 183
LVV+TGGG N Y+ GISV+LDVP+ L QR+ A D RPL + +
Sbjct: 60 KPGSSLVVATGGGMPCFNDNMDYINATGISVFLDVPVAVLVQRMVAHAIDDRPLYNANDP 119
Query: 184 GDAYTEALNRLSTLWEERGEAYANANARVSLE 215
E + L ++ R Y+ A+ V+ E
Sbjct: 120 -----ELVRSLEQRYQSRLPYYSKAHVIVTGE 146
>gi|407781926|ref|ZP_11129142.1| shikimate kinase [Oceanibaculum indicum P24]
gi|407206965|gb|EKE76909.1| shikimate kinase [Oceanibaculum indicum P24]
Length = 191
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 86/159 (54%), Gaps = 12/159 (7%)
Query: 53 PYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGF 112
P + I LVG+MG+GK+ VG+ L+ +G F D DT IE++ G ++ EIF +GE
Sbjct: 5 PKHIPKTIALVGLMGAGKSAVGRRLAARMGLPFIDADTAIEEAA-GCTIEEIFARHGEPE 63
Query: 113 FREKETEVLQKLSLMRQL-VVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAV 170
FR+ E V+Q+L L V++TGGGA V R Q +++WL LE L +R+A
Sbjct: 64 FRDGERRVIQRLLESEPLHVLATGGGAFVNVQTRARLKQHAVTIWLRADLETLLERVAK- 122
Query: 171 GTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
+RPLL Q GD L L +R YA A+
Sbjct: 123 -RSNRPLLKQ---GDPRAV----LEKLIADRYPIYAEAD 153
>gi|144899679|emb|CAM76543.1| Shikimate kinase [Magnetospirillum gryphiswaldense MSR-1]
Length = 191
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 11/153 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R + LVG+MG+GK+ VG+ L+ LG SF D D E + G S+++ F +GE FR+ E
Sbjct: 24 RTVVLVGLMGAGKSCVGRRLAARLGLSFIDSDVEFETAA-GCSISDYFAKHGEAAFRDGE 82
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRP 176
+V+ +L +++TGGGA P R Q +SVW+ L+ L +R + G D RP
Sbjct: 83 RKVIARLMEGTPCILATGGGAFIDPETRDRIKQSALSVWIRADLDLLVKRTS--GRDHRP 140
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LL ++GD LS L E R YA A+
Sbjct: 141 LL---KTGDPR----EILSRLMEARYPIYAEAD 166
>gi|103487283|ref|YP_616844.1| shikimate kinase [Sphingopyxis alaskensis RB2256]
gi|98977360|gb|ABF53511.1| shikimate kinase [Sphingopyxis alaskensis RB2256]
Length = 191
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 90/168 (53%), Gaps = 19/168 (11%)
Query: 51 IEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGE 110
I + R I LVG+MGSGK+TVG+ L+ L F D D IE++ G ++A+IF +GE
Sbjct: 16 IPASIRDRSIVLVGLMGSGKSTVGRRLAQRLRMRFADADDEIERAA-GMTIADIFARFGE 74
Query: 111 GFFREKETEVLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQR 166
FR+ E V+ +L + +V++TGGGA TR + ++ + +WLD + L +R
Sbjct: 75 THFRDGERRVIARLLGGKPMVLATGGGAFINDETRAL---ILKDSLCIWLDADIPTLVER 131
Query: 167 IAAVGTDS-RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
VG S RPLL + G+ E L R YA A+ RVS
Sbjct: 132 ---VGRRSHRPLLKDRDPGEVLRE-------LAAVRNPIYAEAHLRVS 169
>gi|358639198|dbj|BAL26495.1| shikimate kinase [Azoarcus sp. KH32C]
Length = 180
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 80/147 (54%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ LVGMMG+GKTTVG+ + F DCD IE G V IF++ GE FR +E++
Sbjct: 3 VILVGMMGAGKTTVGREYARRHHLRFVDCDHEIEART-GVKVPTIFEIEGEAGFRRRESQ 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ +L+ LV++TGGGAV P N M ++GI V+L+VP + L +R +RPLL
Sbjct: 62 LIDELTQESGLVLATGGGAVLNPDNRAMMSERGIVVYLNVPTQILWERTR--NDRNRPLL 119
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
R+ TL ER Y
Sbjct: 120 Q-------VANPRERIETLHRERDPLY 139
>gi|114570823|ref|YP_757503.1| shikimate kinase [Maricaulis maris MCS10]
gi|114341285|gb|ABI66565.1| shikimate kinase [Maricaulis maris MCS10]
Length = 179
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 86/157 (54%), Gaps = 11/157 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + L+G+MG GKTTVG+ L+ L F D D +E++ G SV+EIF+ +GE FR+ E
Sbjct: 9 KSLVLIGLMGVGKTTVGRRLAHALKLQFRDADEEVEKAA-GRSVSEIFEDFGEHAFRDGE 67
Query: 118 TEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRP 176
+V+ +L +V++ GGGA V R S+WL +E L QR+A D+RP
Sbjct: 68 RKVIARLLEEPPMVLALGGGAFVDDETRERVKAMATSIWLQADVETLVQRVAR--RDTRP 125
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
LL D E + L TL +R AYA A+ V
Sbjct: 126 LLR-----DEDPETV--LRTLLNKRQAAYAEADIHVD 155
>gi|292493846|ref|YP_003529285.1| shikimate kinase [Nitrosococcus halophilus Nc4]
gi|291582441|gb|ADE16898.1| Shikimate kinase [Nitrosococcus halophilus Nc4]
Length = 182
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 102/189 (53%), Gaps = 22/189 (11%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GKTT+G+ L+ +LG F D D IE G S+ IF++ GE FR++E
Sbjct: 3 RNIFLVGPMGAGKTTLGRYLAKMLGRKFHDSDREIE-CRTGVSIPVIFEIEGEAGFRQRE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRP 176
+++ +L+ + ++++TGGGAV N R Q G V+L E L +R V +RP
Sbjct: 62 CKMIAELTQLSNIILATGGGAVLAIENRQRLAQGGTVVYLYASPEQLYRR--TVHDSNRP 119
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAI 236
LL Q E+ L RL L +ER Y + +I +K G + + + +A
Sbjct: 120 LL-QTEN------PLERLKRLLKERDPLYR------EVADITIKTGERPIKA-----VAN 161
Query: 237 EALEQIEGF 245
E L Q++ +
Sbjct: 162 EVLRQLKRY 170
>gi|300856077|ref|YP_003781061.1| shikimate kinase [Clostridium ljungdahlii DSM 13528]
gi|300436192|gb|ADK15959.1| shikimate kinase [Clostridium ljungdahlii DSM 13528]
Length = 169
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 86/147 (58%), Gaps = 15/147 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM GSGKTT+G +L+ L D D IE S +G S+ +IFK GE FR+ E++
Sbjct: 8 IVLIGMPGSGKTTLGNLLASRLNRKCIDLDDYIE-SENGCSIPDIFK-NGEECFRKLESK 65
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++++S+ + ++++TGGG + R N ++K GI V++D PLE + I+ V RPLL
Sbjct: 66 AVEEVSVEKNIIIATGGGVIKRKCNIENLKKNGIVVFIDRPLENI---ISDVDISGRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ +N + ++ ER + Y
Sbjct: 123 KK---------GINEIEKIYNERYDIY 140
>gi|168213890|ref|ZP_02639515.1| shikimate kinase [Clostridium perfringens CPE str. F4969]
gi|170714629|gb|EDT26811.1| shikimate kinase [Clostridium perfringens CPE str. F4969]
Length = 167
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 88/151 (58%), Gaps = 14/151 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ R + L+GM GSGKTT+G+ LS VL +F D D IE+S G + E+F GE FR
Sbjct: 1 MKKRGVLLIGMPGSGKTTIGRELSKVLKMNFLDMDEFIERST-GKEIKELFA-QGEEVFR 58
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++ + LS ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDID---TEG 115
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
RPLL + RL+ L+ +R + Y
Sbjct: 116 RPLLWDGKE---------RLTNLYRDRIDLY 137
>gi|339443498|ref|YP_004709503.1| hypothetical protein CXIVA_24340 [Clostridium sp. SY8519]
gi|338902899|dbj|BAK48401.1| hypothetical protein CXIVA_24340 [Clostridium sp. SY8519]
Length = 175
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 98/188 (52%), Gaps = 22/188 (11%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+L+G MG+GK+TV + L+ + G + D IE +G S+ EIF YGE FRE E
Sbjct: 3 RHIFLIGFMGTGKSTVARELARLSGTDVCEMDEQIEAD-NGMSIKEIFSRYGEPRFRELE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
TE+ ++ + + VVS GGG RP N ++ GI V L E + +R+ +D+RP
Sbjct: 62 TEMCRRFAELPPAVVSCGGGVAMRPENVALLKASGIVVLLKAAPETVYERVK--DSDTRP 119
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAI 236
LL+ G +A+ L E+R AY +A ++AV D TP IA
Sbjct: 120 LLN----GQMRVDAIR---DLMEQRRAAYESAC------DLAV-----DTDGKTPEEIAR 161
Query: 237 EALEQIEG 244
E L + +G
Sbjct: 162 EILSEADG 169
>gi|334131129|ref|ZP_08504895.1| LOW QUALITY PROTEIN: Putative bifunctional protein
[Methyloversatilis universalis FAM5]
gi|333443759|gb|EGK71720.1| LOW QUALITY PROTEIN: Putative bifunctional protein
[Methyloversatilis universalis FAM5]
Length = 175
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVGMMG+GKTTVG+ L+ L F DCD IE G S+ IF++ GE FR +E
Sbjct: 7 IFLVGMMGAGKTTVGRQLARRLHKRFVDCDHEIEART-GVSIPTIFEIEGEAGFRRREAA 65
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ L+ LV++TGGGAV P + +++ G V+LDVP + L R G +RPLL
Sbjct: 66 TIEALAQESGLVLATGGGAVLDPASRAHLKSGGWVVYLDVPPDVLWARTR--GDRNRPLL 123
Query: 179 H 179
Sbjct: 124 Q 124
>gi|158426112|ref|YP_001527404.1| shikimate kinase [Azorhizobium caulinodans ORS 571]
gi|158333001|dbj|BAF90486.1| shikimate kinase [Azorhizobium caulinodans ORS 571]
Length = 212
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 85/165 (51%), Gaps = 11/165 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L RCI LVGM G+GK+TVG+ L+ LG F D D IE++ G S+ EIF GE FR
Sbjct: 31 LGTRCIVLVGMPGAGKSTVGRRLAKRLGLPFLDADEEIERAA-GMSIPEIFSSRGESEFR 89
Query: 115 EKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
E E V+ +L V++TGGGA + ++ +SVWL + L +R+
Sbjct: 90 EGERRVIARLLQTGPCVLATGGGAFMNAETRAAVARQAVSVWLRAEIPVLLRRVRK--RA 147
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
RPLL A + + +L L RG+ YA A+ V + A
Sbjct: 148 DRPLL-------AEGDPVAKLEALLAARGDTYALADVTVESRDTA 185
>gi|393778306|ref|ZP_10366580.1| AroK protein [Ralstonia sp. PBA]
gi|392714577|gb|EIZ02177.1| AroK protein [Ralstonia sp. PBA]
Length = 192
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 81/138 (58%), Gaps = 5/138 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L+ I+ VG+MG+GKTTVGK ++ LG FFD D IE G + IF+L GE FR
Sbjct: 4 LNPNNIFFVGLMGAGKTTVGKSVAKRLGRPFFDSDHEIEARC-GVRIPTIFELEGEDGFR 62
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD 173
++E + +L+ +V++TGGGAV RP N ++ ++G+ V+L L QR
Sbjct: 63 QREALAIDELTRREGIVLATGGGAVLRPENRAHLHERGVVVYLRANPYDLWQRTRH--DR 120
Query: 174 SRPLLHQCESGDAYTEAL 191
+RPLL Q E+ A EAL
Sbjct: 121 NRPLL-QTENPRAKLEAL 137
>gi|421545121|ref|ZP_15991186.1| shikimate kinase [Neisseria meningitidis NM140]
gi|421548141|ref|ZP_15994169.1| shikimate kinase [Neisseria meningitidis NM2781]
gi|402321804|gb|EJU57276.1| shikimate kinase [Neisseria meningitidis NM140]
gi|402326863|gb|EJU62261.1| shikimate kinase [Neisseria meningitidis NM2781]
Length = 170
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 96/176 (54%), Gaps = 20/176 (11%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+G+ I L+G+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR
Sbjct: 4 FNGKLI-LIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFR 61
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
+ET +L+KL ++ +V+S+GGGAV + N ++K G V+L P E L +R +
Sbjct: 62 SRETAILKKLVILPHIVLSSGGGAVLKEENRALIRKSGTVVYLHAPPEILLERTRC--DN 119
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 221
SRPLL + L +L L+ R Y +AN R +++ + +L
Sbjct: 120 SRPLLQ-------VADPLEKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 168
>gi|418300542|ref|ZP_12912363.1| shikimate kinase [Agrobacterium tumefaciens CCNWGS0286]
gi|355533381|gb|EHH02714.1| shikimate kinase [Agrobacterium tumefaciens CCNWGS0286]
Length = 193
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 100/188 (53%), Gaps = 17/188 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I VG+MG+GK+ VG++++ L F D D IE+ V +++E+F YGE FR
Sbjct: 20 LGRRNIVFVGLMGAGKSAVGRMVAQQLKVPFIDTDVEIER-VSRMTISELFATYGEEEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
ET V+++L V+STGGGA R++ + GIS WL LE L +R+ D
Sbjct: 79 ALETRVIKRLLRGGPKVISTGGGAFINDNTRRHITRGGISFWLKADLEVLWERVNK--RD 136
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
RPLL + E+ A L+ L E+R YA A+ + ++ K++ +T V
Sbjct: 137 HRPLL-KTENPKAT------LAALMEKRYPIYAEADMTIESRDV-----RKEI-IVTEVL 183
Query: 234 IAIEALEQ 241
AI +EQ
Sbjct: 184 TAIAGIEQ 191
>gi|126737603|ref|ZP_01753333.1| shikimate kinase [Roseobacter sp. SK209-2-6]
gi|126720996|gb|EBA17700.1| shikimate kinase [Roseobacter sp. SK209-2-6]
Length = 196
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 94/181 (51%), Gaps = 11/181 (6%)
Query: 39 DEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDG 98
++ Q+ + Q+ P + + +VGMMG+GKT VG+ L+ L F D D IE + +
Sbjct: 3 EKEQIPADMPQKEVPGRLKKTLVMVGMMGAGKTAVGRALAARLQVPFLDSDHEIEAAANM 62
Query: 99 TSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLD 157
T + EIF GE FFR KE +V+ +L ++STGGGA N + Q G SVWL+
Sbjct: 63 T-IPEIFSRDGEAFFRLKERQVIARLLEEECGILSTGGGAFLAEENRAIISQHGASVWLN 121
Query: 158 VPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
LE L R+ D+RPLL + D + LS L+ +R YA A+ V E
Sbjct: 122 ADLEVLWNRVR--HRDTRPLLR---TADPHAT----LSDLYHKRVPLYALADLAVVSEGK 172
Query: 218 A 218
A
Sbjct: 173 A 173
>gi|182624122|ref|ZP_02951909.1| shikimate kinase [Clostridium perfringens D str. JGS1721]
gi|177910738|gb|EDT73098.1| shikimate kinase [Clostridium perfringens D str. JGS1721]
Length = 167
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 88/151 (58%), Gaps = 14/151 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ R + L+GM GSGKTT+G+ LS VL +F D D IE+S G + E+F GE FR
Sbjct: 1 MKKRGVLLIGMPGSGKTTIGRELSKVLKMNFLDMDEFIERST-GKEIKELFA-QGEEVFR 58
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++ + LS ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDID---TEG 115
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
RPLL + RL+ L+ +R + Y
Sbjct: 116 RPLLWDGKE---------RLTNLYRDRIDLY 137
>gi|269837146|ref|YP_003319374.1| 3-dehydroquinate synthase [Sphaerobacter thermophilus DSM 20745]
gi|269786409|gb|ACZ38552.1| 3-dehydroquinate synthase [Sphaerobacter thermophilus DSM 20745]
Length = 548
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 82/155 (52%), Gaps = 13/155 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+YL+G+ GSGKTT+ +L+ LG+ D D +E+ G S+ +IF +GE FR E +
Sbjct: 6 VYLIGLSGSGKTTLAPLLAERLGFEAVDIDAEVERHF-GRSIPDIFAAFGEPVFRAAERD 64
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-----GISVWLDVPLEALAQRIAAVGTDS 174
L + S ++VV+TGGGAV P NW M+ ++ V +E L + A
Sbjct: 65 ALAQASRRTRVVVATGGGAVLDPANWASMRPRSAIVHLTAAPSVLIERLEAAVRATPMAE 124
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
RPLL GD + L RL +LW+ R Y A+
Sbjct: 125 RPLLR----GD---DPLARLESLWQARRHLYEQAD 152
>gi|300087347|ref|YP_003757869.1| shikimate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527080|gb|ADJ25548.1| Shikimate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 176
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MGSGK++VGK L+ LG F + D L+E++ G ++A+IF+ GEG FRE E
Sbjct: 5 IALIGFMGSGKSSVGKRLARRLGRDFLETDRLVEEAA-GATIADIFRESGEGAFRELEAG 63
Query: 120 VLQKLSLM-RQLVVSTGGGAVTRPINWRYMQKGIS-VWLDVPLEALAQRIAAVGTDSRPL 177
V++ + L R V++ GGG +TRP N +++ + ++L +E L +R+A + RPL
Sbjct: 64 VIKNIGLTARNAVIACGGGIITRPENLENLKRDTTIIYLKTGVEELQERLAH--SRRRPL 121
Query: 178 LHQ 180
L +
Sbjct: 122 LER 124
>gi|168204595|ref|ZP_02630600.1| shikimate kinase [Clostridium perfringens E str. JGS1987]
gi|170663856|gb|EDT16539.1| shikimate kinase [Clostridium perfringens E str. JGS1987]
Length = 167
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 89/151 (58%), Gaps = 14/151 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ R + L+GM G+GKTT+G+ LS VL +F D D IE+S G + E+F GE FR
Sbjct: 1 MKKRGVLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFIERST-GKEIKELFA-QGEEVFR 58
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++ + LS+++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+
Sbjct: 59 DLESKSCELLSILKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDID---TEG 115
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
RPLL + RL+ L+ +R + Y
Sbjct: 116 RPLLWDGKE---------RLTNLYRDRIDLY 137
>gi|54401374|gb|AAV34468.1| predicted shikimate kinase [uncultured proteobacterium RedeBAC7D11]
Length = 167
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 92/160 (57%), Gaps = 12/160 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++LVG MG+GK+T G+ LS L Y F+D D LIE++ +G + +IF+ GE +FR+KE++
Sbjct: 3 VFLVGPMGTGKSTTGRNLSEKLDYDFYDTDKLIEKA-EGKKIKDIFEQDGEDYFRQKESK 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTDSRPLL 178
L + + + V++TGGG V R N +++ V +LD E +R + RPLL
Sbjct: 62 ALSETKTLEKAVIATGGGIVEREENRLFLEHEDKVIFLDSSPERQYKRTK--DSKKRPLL 119
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY-ANANARVSLENI 217
+ GD L L L+E+R Y A + ++ ++N+
Sbjct: 120 N---DGD----GLEILKQLYEKRINFYEAVSKKKIYMDNL 152
>gi|395493471|ref|ZP_10425050.1| shikimate kinase [Sphingomonas sp. PAMC 26617]
Length = 164
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 11/153 (7%)
Query: 62 LVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL 121
LVG+MG+GK+TVG+ L+ LG F D D+ IE + G S+ +IF+ +GE +FR+ E V+
Sbjct: 2 LVGLMGAGKSTVGRRLAIRLGLPFVDADSEIETAA-GMSIPDIFERFGEAYFRDGERRVI 60
Query: 122 QKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
+L + V++TGGGA V + +G +VWLD LA R++ D+RPLL
Sbjct: 61 ARLMNGDRRVIATGGGAFVDDRTRETILAQGFAVWLDAKPSVLADRVSR--RDTRPLLRG 118
Query: 181 CESGDAYTEALNRLSTLWEERGEAYANANARVS 213
+ L L L R YA A RVS
Sbjct: 119 -------RDPLAVLEELARVRNPFYAMAPLRVS 144
>gi|326403660|ref|YP_004283742.1| shikimate kinase/3-dehydroquinate synthase [Acidiphilium multivorum
AIU301]
gi|325050522|dbj|BAJ80860.1| shikimate kinase/3-dehydroquinate synthase [Acidiphilium multivorum
AIU301]
Length = 552
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 85/156 (54%), Gaps = 11/156 (7%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I L+G+MG+GK+ VG+ L+ L F D D IE + G +VA+IF GE FR
Sbjct: 15 LPMRSIVLIGLMGAGKSAVGRRLAAQLALPFHDSDAEIEAAA-GKTVADIFASEGEAAFR 73
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD 173
+E ++ +L +V++TGGGA P + + ISVWL L+ L R+ G
Sbjct: 74 ARERAMIAELLAGPPIVLATGGGAFMDPETRAVIGARAISVWLRATLDVLLARVR--GRT 131
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
RPLL+Q GD E L+RLS L R YA A+
Sbjct: 132 HRPLLNQ---GDP-AEILSRLSAL---RAPVYAEAD 160
>gi|302383499|ref|YP_003819322.1| shikimate kinase [Brevundimonas subvibrioides ATCC 15264]
gi|302194127|gb|ADL01699.1| Shikimate kinase [Brevundimonas subvibrioides ATCC 15264]
Length = 188
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I LVG+MG GK+TVG+ L+ LG F D D IE + T V+EIF GE FR E
Sbjct: 15 RIIALVGLMGVGKSTVGRRLANRLGLPFVDGDDAIEAAAQMT-VSEIFAQMGEAEFRAGE 73
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
V+++L +V++TGGGAV P M+ K SVWL + +A R+ D+RP
Sbjct: 74 ARVMRRLLEGPPIVLATGGGAVLNPDTRALMKAKATSVWLRADIRVVASRVQR--RDTRP 131
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
LL + L L+ + E R YA A+ V +
Sbjct: 132 LLRG-------KDPLAALTAMAEVRYPVYATADVTVDV 162
>gi|297170347|gb|ADI21382.1| shikimate kinase [uncultured gamma proteobacterium HF0010_20H22]
Length = 167
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 94/162 (58%), Gaps = 12/162 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++LVG MG+GK+T GK LS L Y F D D LIE++ + + +IF+ GE +FR+KE++
Sbjct: 3 VFLVGPMGTGKSTTGKNLSEELDYDFCDTDKLIEKA-ERRKIKDIFEQNGEDYFRQKESK 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
L + ++ +V++TGGG V R N +++ + ++LD E +R + RPLL
Sbjct: 62 ALDETKTLQNVVIATGGGIVEREENRLFLECEDKVIFLDSSPERQYERTK--DSKKRPLL 119
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY-ANANARVSLENIAV 219
+ GD L L L+E+R Y A + ++S++N++
Sbjct: 120 N---DGD----GLEILKKLYEKRINFYEAVSKKKISMDNLST 154
>gi|148260467|ref|YP_001234594.1| 3-dehydroquinate synthase [Acidiphilium cryptum JF-5]
gi|146402148|gb|ABQ30675.1| shikimate kinase [Acidiphilium cryptum JF-5]
Length = 552
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 85/156 (54%), Gaps = 11/156 (7%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I L+G+MG+GK+ VG+ L+ L F D D IE + G +VA+IF GE FR
Sbjct: 15 LPMRSIVLIGLMGAGKSAVGRRLAAQLALPFHDSDAEIEAAA-GKTVADIFASEGEAAFR 73
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD 173
+E ++ +L +V++TGGGA P + + ISVWL L+ L R+ G
Sbjct: 74 ARERAMIAELLAGPPIVLATGGGAFMDPETRAVIGARAISVWLRATLDVLLARVR--GRT 131
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
RPLL+Q GD E L+RLS L R YA A+
Sbjct: 132 HRPLLNQ---GDP-AEILSRLSAL---RAPVYAEAD 160
>gi|421074271|ref|ZP_15535309.1| Shikimate kinase [Pelosinus fermentans JBW45]
gi|392527631|gb|EIW50719.1| Shikimate kinase [Pelosinus fermentans JBW45]
Length = 180
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 87/147 (59%), Gaps = 15/147 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM GSGKT++G I++ L F+D D I++ + +++E+F L GE FR+ E+
Sbjct: 7 IVLIGMPGSGKTSLGAIIAERLELDFYDIDQYIQKK-ENKTISELF-LLGESHFRQIESN 64
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++++S + +V++TGGG VTRP N + QKG ++D P+E + I + +RPLL
Sbjct: 65 AVREVSSKKPIVIATGGGVVTRPENIAVLQQKGTIFYIDRPIEMI---IETIDVAARPLL 121
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ + R+ +L+E+R Y
Sbjct: 122 ---------ADNVKRIYSLYEQRKHLY 139
>gi|417841309|ref|ZP_12487413.1| Shikimate kinase [Haemophilus haemolyticus M19501]
gi|341949347|gb|EGT75951.1| Shikimate kinase [Haemophilus haemolyticus M19501]
Length = 180
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 85/145 (58%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMDFIDSDAVIEERT-GADISWIFDLEGEEGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ M+ +V+STGGGAV + Y+ +GI ++L+ +E QR RP
Sbjct: 64 ERIINELTQMQGIVLSTGGGAVLSKESRNYLSARGIVIYLETTVEKQFQRTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL ++ E L ++ + L+EE
Sbjct: 122 LLQDADNPRQVLEDLAKIRNPLYEE 146
>gi|302392507|ref|YP_003828327.1| shikimate kinase [Acetohalobium arabaticum DSM 5501]
gi|302204584|gb|ADL13262.1| Shikimate kinase [Acetohalobium arabaticum DSM 5501]
Length = 169
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 84/161 (52%), Gaps = 12/161 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MG+GK+TVG+ LS L F D D +IE+ G ++ IF YGE +FR+ ETE
Sbjct: 4 IVLIGFMGTGKSTVGQHLSERLELEFVDSDEVIEERA-GREISSIFAEYGEEYFRDLETE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ LS ++LV+STGGG V R N + +KG + L E + R V RPLL
Sbjct: 63 VITDLSRQQRLVISTGGGVVLRQENIEQLRKKGTIILLTAEPEVILDR---VKDSDRPLL 119
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 219
E L ++ + +R E Y ++ ++V
Sbjct: 120 E-------VPEPLEKIKEMLADRREYYDITEYKIDTSQMSV 153
>gi|326315790|ref|YP_004233462.1| shikimate kinase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323372626|gb|ADX44895.1| Shikimate kinase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 183
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 53 PYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGF 112
P LS I+L+G+ GSGK+TVG+ L+ LG F D D +IEQ + G S+ F GE
Sbjct: 4 PQLS---IHLIGLPGSGKSTVGRHLARRLGLPFIDSDHVIEQRI-GGSIRGFFDREGEAA 59
Query: 113 FREKETEVLQKLS--LMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAA 169
FR+ E EV+++L+ +R V++TGGG V RP N R ++G V+L+ E + + I
Sbjct: 60 FRDLEEEVIRELTGPEVRPQVLATGGGVVVRPGNRARLRERGTVVYLNASPEEIFRHIRH 119
Query: 170 VGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
+RPLL Q +S L+RL L ER Y A
Sbjct: 120 --DQTRPLL-QVDS------PLDRLRELQRERDPLYREA 149
>gi|261378268|ref|ZP_05982841.1| shikimate kinase [Neisseria cinerea ATCC 14685]
gi|269145357|gb|EEZ71775.1| shikimate kinase [Neisseria cinerea ATCC 14685]
Length = 170
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 83/147 (56%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G+MG+GKTT+G+ ++ L Y F+DCD + + G S+ IF++ GE FR +ET
Sbjct: 8 LILIGLMGAGKTTLGRQVARSLNYCFYDCDHEVSAAA-GVSIPTIFEMEGEQGFRLRETA 66
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+KL ++ +V+STGGGAV + N ++K G V+L E L +R +RPLL
Sbjct: 67 MLKKLVILPHIVLSTGGGAVLKEENRNLIRKSGTVVYLHAQPETLLERTRC--DSNRPLL 124
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ L RL L+ R Y
Sbjct: 125 Q-------VADPLGRLRELYTARDPLY 144
>gi|254462192|ref|ZP_05075608.1| shikimate kinase [Rhodobacterales bacterium HTCC2083]
gi|206678781|gb|EDZ43268.1| shikimate kinase [Rhodobacteraceae bacterium HTCC2083]
Length = 180
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 92/168 (54%), Gaps = 17/168 (10%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ + LVGMMG+GKT VGK L+ L F D D I + + S+AEIF+ GE FFR +E
Sbjct: 7 KTVVLVGMMGAGKTAVGKALAAKLDVPFLDSDFEIVTAAN-MSIAEIFERDGEAFFRARE 65
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
+EV+ +L V+STGGGA N + ++G+SV L+ L L R+ D+RP
Sbjct: 66 SEVIARLLDGAPCVLSTGGGAFLAERNRILISERGVSVCLNAALPLLWSRVR--NKDTRP 123
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARV------SLENIA 218
LL ++ D Y LS L+E R Y A+ V S+E++A
Sbjct: 124 LL---QTPDPYAT----LSALFEARAPIYELADVSVDASHDYSIEDMA 164
>gi|333896999|ref|YP_004470873.1| shikimate kinase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112264|gb|AEF17201.1| Shikimate kinase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 171
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I L G M +GKT VGK ++ +L + F D D LIE+ + G + EIF YGE +FR E
Sbjct: 2 KNIALTGFMATGKTVVGKRVADILSFGFIDTDDLIEK-ISGMKITEIFDKYGEKYFRGIE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+ + S ++ V+STGGG V P N ++K G+ + L E + + I D RP
Sbjct: 61 KIAVARASRLKNHVISTGGGVVLNPSNIVQLRKHGVVICLKANPEVILRNIG--NNDKRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 219
+L +GD Y ++ L ER Y A+ + + ++++
Sbjct: 119 IL---ANGDVY----EKIKALLAERQHYYEFADYTIDVSDMSI 154
>gi|296135154|ref|YP_003642396.1| shikimate kinase [Thiomonas intermedia K12]
gi|295795276|gb|ADG30066.1| Shikimate kinase [Thiomonas intermedia K12]
Length = 181
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL+G+MG+GKTTVG+ L+ LG F D D IE+ G ++ +F GE FR+ E
Sbjct: 6 IYLIGLMGAGKTTVGRTLAQRLGLRFIDSDHEIERE-QGCPISTLFSRLGEAGFRDIEAR 64
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+ L+ + +V++TGGGAV RP N + + ++G V+L + LA R+ +RPLL
Sbjct: 65 AIDALTQLEGIVLATGGGAVLRPENRKALHERGTVVYLRATPDDLAHRLR--NDRNRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEE 200
Q ++ E L+ E
Sbjct: 123 QQGDARAKLHELFRVRDPLYRE 144
>gi|258515924|ref|YP_003192146.1| shikimate kinase [Desulfotomaculum acetoxidans DSM 771]
gi|257779629|gb|ACV63523.1| Shikimate kinase [Desulfotomaculum acetoxidans DSM 771]
Length = 173
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 88/154 (57%), Gaps = 11/154 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I ++G MG+GKT VG+ L+ +L F D DT IE+ + T + +IF G FR +E+
Sbjct: 4 IVMIGFMGTGKTVVGRRLAALLKKRFIDTDTEIERITEKT-IVQIFAQDGAVRFRSEESL 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+++KL LV+STGGG V P N ++K GI + L+ P E + QR+ SRPLL
Sbjct: 63 LVKKLEDQDNLVISTGGGIVLNPENVVSLKKNGILIALNAPPEVIYQRVRH--KRSRPLL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
++ GD AL ++ L+ ER AY A RV
Sbjct: 121 NK---GD----ALIKIKELFAEREYAYDVAEYRV 147
>gi|313895364|ref|ZP_07828921.1| shikimate kinase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312976259|gb|EFR41717.1| shikimate kinase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 173
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 98/185 (52%), Gaps = 20/185 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MG+GKT+VG++L+ LG +F D D IE++ G ++ E+F +GE +FR +E E
Sbjct: 4 IVLIGFMGTGKTSVGRLLAARLGCAFHDLDKKIEEA-HGMTIPEMFVRHGEPYFRAREKE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+ + LVV+TGGG V N R ++K GI V L ++ + R AA G RP+L
Sbjct: 63 AVAAAAARGNLVVATGGGVVKDAENMRALRKNGIIVALTADVDTILARTAARG--ERPVL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
+ ++GD ++ L EER YA A+ V D + P+ IA
Sbjct: 121 DRADAGDRRAA----VAALMEERRLLYAGADVTV------------DTTGRAPLEIAEHI 164
Query: 239 LEQIE 243
++ I
Sbjct: 165 MQTIR 169
>gi|384261785|ref|YP_005416971.1| shikimate kinase [Rhodospirillum photometricum DSM 122]
gi|378402885|emb|CCG08001.1| Shikimate kinase [Rhodospirillum photometricum DSM 122]
Length = 227
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 82/156 (52%), Gaps = 17/156 (10%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R + LVG+MG+GKT VG+ L+ + G F D D IE + +AEIF YGE FR E
Sbjct: 47 RTVVLVGLMGAGKTCVGRCLARMAGVPFVDADAEIETAAR-LPIAEIFARYGEAEFRATE 105
Query: 118 TEVLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
V+++L V++TGGGA TR + +G+S+WL LE L R A G
Sbjct: 106 RRVMERLLERSPCVLATGGGAFMAEETRAL---IRAQGVSLWLRADLETLVARTA--GRS 160
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
RPLL+ +GDA L L E R YA A+
Sbjct: 161 HRPLLN---TGDAR----ETLRGLMERRYPVYAEAD 189
>gi|429735842|ref|ZP_19269765.1| shikimate kinase [Selenomonas sp. oral taxon 138 str. F0429]
gi|429156766|gb|EKX99387.1| shikimate kinase [Selenomonas sp. oral taxon 138 str. F0429]
Length = 173
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 20/185 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G MG+GKT+VG++L+ LG +F D D IE+ G S+ +F+ +GE +FR +E +
Sbjct: 4 VVLIGFMGTGKTSVGRLLAARLGCAFHDLDRKIEEK-HGMSIPAMFREHGEPYFRAREKD 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+++ + LV++TGGG V N + Q GI V L ++ + QR +A G +RP+L
Sbjct: 63 AVREAAGRTNLVIATGGGTVKDAENVAILRQNGILVALTADVDTILQRTSARG--ARPVL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
++GD + L +ER Y A+ V D S P+ +A
Sbjct: 121 DHADAGDRRAAVVQ----LLDERRSLYDGADITV------------DTSGRAPLEVAEHI 164
Query: 239 LEQIE 243
L+ +
Sbjct: 165 LQALR 169
>gi|357029137|ref|ZP_09091144.1| hypothetical protein MEA186_30097, partial [Mesorhizobium amorphae
CCNWGS0123]
gi|355536211|gb|EHH05488.1| hypothetical protein MEA186_30097, partial [Mesorhizobium amorphae
CCNWGS0123]
Length = 293
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 19/193 (9%)
Query: 48 SQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKL 107
++EI L+GR + LVGM +GK+++G L+ L F D D +I++ S+++IF++
Sbjct: 44 AKEIFAALNGRPVVLVGMPSAGKSSIGPALARRLRLPFVDTDKIIQKDTR-ISISQIFEV 102
Query: 108 YGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM--QKGISVWLDVPLEALAQ 165
+GE FFR+ E V+ L V++TGGGA R R++ +K +S+WLD L+ + +
Sbjct: 103 HGEAFFRDMEARVIADLLQKGPAVIATGGGAFMR-EQSRHLIGEKAVSIWLDTRLDVIEK 161
Query: 166 RIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKD 225
R SRPLL +++ L ER YA A+ V V +D
Sbjct: 162 RTR--NDTSRPLLQ-------GPNPEQKIARLLSERRPFYAQADITV------VPPHQQD 206
Query: 226 VSSLTPVTIAIEA 238
++ P A+ A
Sbjct: 207 RKNVDPCVSALHA 219
>gi|91776806|ref|YP_546562.1| shikimate kinase [Methylobacillus flagellatus KT]
gi|91710793|gb|ABE50721.1| shikimate kinase [Methylobacillus flagellatus KT]
Length = 170
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+ VG+MG+GKTT+G+I++ L +F+D D IE+ G S+ IF+L E FR++E
Sbjct: 5 IFFVGLMGAGKTTIGRIIAKHLNKAFYDSDHEIERRT-GVSIPVIFELEKEDGFRKREAA 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+++LS M+ +V++TGGGAV P N ++ M+ G ++L + L R RPLL
Sbjct: 64 VIEELSHMQDIVLATGGGAVLLPENRKHLMENGTVIYLRANVNELWHRTR--NDKHRPLL 121
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
RL L+ +R Y
Sbjct: 122 QN-------DNPRQRLEHLFAQRDPLY 141
>gi|418021558|ref|ZP_12660622.1| Shikimate kinase [Candidatus Regiella insecticola R5.15]
gi|347603087|gb|EGY27988.1| Shikimate kinase [Candidatus Regiella insecticola R5.15]
Length = 174
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 95/167 (56%), Gaps = 12/167 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L FFD D IEQ G VA +F + GE FRE+E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMEFFDSDQQIEQRT-GADVAWVFDVEGEDGFRERE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SR 175
+++ +L+ + +V++TGGG+V +R R +G+ V+L+ +E +++A D R
Sbjct: 64 EKIINELTEKQGIVLATGGGSVKSRETCNRLSARGVVVYLETTIE---KQLARTQRDKKR 120
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYAN-ANARVSLENIAVKL 221
PLL Q + A + L TL ER Y A+ + ++ + KL
Sbjct: 121 PLLQQADES-----ARHILETLAAEREPLYQKIADVTIRTDDQSAKL 162
>gi|393764153|ref|ZP_10352765.1| shikimate kinase I [Alishewanella agri BL06]
gi|392604783|gb|EIW87682.1| shikimate kinase I [Alishewanella agri BL06]
Length = 172
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ +L F+D D IE+ G +A +F L GE FR +E
Sbjct: 5 RNIFLVGPMGAGKSTIGRHLAEMLHLEFYDSDQEIERRT-GADIAWVFDLEGEAGFRVRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SR 175
V+Q L+ ++ +V++TGGG+V ++ R +GI V+L+ P+E +++A D R
Sbjct: 64 ENVIQDLTELQGIVLATGGGSVLSKETRNRLSARGIVVYLETPIE---KQVARTQRDKKR 120
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYA 206
PLL E E L RL+ ER YA
Sbjct: 121 PLLQTKEEP---KEVLERLAA---ERNPLYA 145
>gi|332286104|ref|YP_004418015.1| shikimate kinase [Pusillimonas sp. T7-7]
gi|330430057|gb|AEC21391.1| shikimate kinase [Pusillimonas sp. T7-7]
Length = 198
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 44 LKNKSQ-EIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVA 102
L NK Q +P I+L+GMMG+GKTT+G+ L+ +L F D D +E G V+
Sbjct: 12 LPNKDQPNTKPLGYDTPIFLIGMMGAGKTTIGRHLARILDRDFVDLDHQLEARC-GVRVS 70
Query: 103 EIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLE 161
IF + GE FR++E+ L + S +V++TGGGAV N RY+ ++G+ V+L E
Sbjct: 71 LIFDIEGEEGFRKRESVALDECSQRCNIVLATGGGAVLASENQRYLKERGVVVYLRATAE 130
Query: 162 ALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWE 199
L +R+A SRPLL + E L + ++E
Sbjct: 131 ELFRRVAR--DRSRPLLQTPDPQARIRELLTQREPIYE 166
>gi|313204310|ref|YP_004042967.1| shikimate kinase [Paludibacter propionicigenes WB4]
gi|312443626|gb|ADQ79982.1| shikimate kinase [Paludibacter propionicigenes WB4]
Length = 170
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R ++L+G MGSGKTT+GK+++ LGY F D D IE T +++IF GE FR E
Sbjct: 2 RRVFLIGYMGSGKTTIGKLVAEKLGYGFVDMDVYIENKYFNT-ISQIFAELGEEQFRLME 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
L ++S +++STGGGA N YM+ KG++++L + LA+R+ + + RP
Sbjct: 61 QRCLHEVSEFEDVIISTGGGAPCFFDNMEYMKSKGLTIYLKLTAAELAERLESSQANKRP 120
Query: 177 LLHQCESGD 185
L+ SGD
Sbjct: 121 LIAG-RSGD 128
>gi|169344512|ref|ZP_02865481.1| shikimate kinase [Clostridium perfringens C str. JGS1495]
gi|169297432|gb|EDS79541.1| shikimate kinase [Clostridium perfringens C str. JGS1495]
Length = 171
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 88/151 (58%), Gaps = 14/151 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ R + L+GM G+GKTT+G+ LS VL +F D D IE+S G + E+F GE FR
Sbjct: 1 MKKRGVLLIGMPGAGKTTIGRDLSNVLKMNFLDMDEFIERST-GKEIKELFS-QGEEVFR 58
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++ + LS ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDID---TEG 115
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
RPLL + R++ L+ +R + Y
Sbjct: 116 RPLLWDGKE---------RITNLYRDRIDLY 137
>gi|311747852|ref|ZP_07721637.1| shikimate kinase [Algoriphagus sp. PR1]
gi|126575845|gb|EAZ80155.1| shikimate kinase [Algoriphagus sp. PR1]
Length = 176
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 7/164 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ LVG+ GSGK+T G+ L+ L + ++D D LIE+ + +IF +GEG FRE ETE
Sbjct: 7 VVLVGLPGSGKSTFGRQLATALDFPYYDLDQLIEKKFQ-MKIPDIFNDFGEGRFREWETE 65
Query: 120 VL-QKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPL 177
L + +S LV+++GGG N + K G SV+LDVPLE +++R++ RP+
Sbjct: 66 TLIEVMSSQESLVLASGGGCPCFNDNMDIINKQGASVYLDVPLEEISERLSLPKLQHRPM 125
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKL 221
G E +L +L +R Y A ++S + + +L
Sbjct: 126 FKDLGHG----EITLKLKSLLADREFYYDQAKIKLSGGDFSTEL 165
>gi|83595069|ref|YP_428821.1| shikimate kinase [Rhodospirillum rubrum ATCC 11170]
gi|386351836|ref|YP_006050084.1| shikimate kinase [Rhodospirillum rubrum F11]
gi|124053399|sp|Q2RMW1.1|AROK_RHORT RecName: Full=Shikimate kinase; Short=SK
gi|83577983|gb|ABC24534.1| shikimate kinase [Rhodospirillum rubrum ATCC 11170]
gi|346720272|gb|AEO50287.1| shikimate kinase [Rhodospirillum rubrum F11]
Length = 188
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 11/153 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R + LVG+MG+GKT +G+ L+ + G F D D IE++ T +AEIF YGE FR E
Sbjct: 13 RTLVLVGLMGAGKTCIGRRLAQMAGVPFVDADVEIERAAKRT-IAEIFATYGESEFRALE 71
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
V+ +L R V++TGGGA ++ G+S+WL L+ L R A G RP
Sbjct: 72 RRVMARLLAGRTCVLATGGGAFMAEDTRALIRLHGLSLWLRADLDLLVARTA--GRTHRP 129
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LL+ +GDA +L+ L +R YA A+
Sbjct: 130 LLN---NGDAR----EKLAELMAKRHPVYAEAD 155
>gi|159185832|ref|NP_356985.2| shikimate kinase [Agrobacterium fabrum str. C58]
gi|335033225|ref|ZP_08526594.1| shikimate kinase [Agrobacterium sp. ATCC 31749]
gi|159140966|gb|AAK89770.2| shikimate kinase [Agrobacterium fabrum str. C58]
gi|333795402|gb|EGL66730.1| shikimate kinase [Agrobacterium sp. ATCC 31749]
Length = 193
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 108/197 (54%), Gaps = 24/197 (12%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I VG+MG+GK+ VG++++ L F D D IE+ V +++E+F YGE FR
Sbjct: 20 LGRRNIVFVGLMGAGKSAVGRMVAQQLKVPFIDTDVEIER-VSRMTISELFATYGEEEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
ET V+++L VVSTGGGA ++++ GIS+WL LE L +R+ D
Sbjct: 79 ALETRVIKRLMRGGPKVVSTGGGAFINDTTRGHIRRGGISLWLKADLEVLWERVNK--RD 136
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
RPLL + E+ A L+ L E+R YA A+ V++E+ V+ K++
Sbjct: 137 HRPLL-KTENPKAT------LAALMEKRYPIYAEAD--VTIESRDVR---KEI------- 177
Query: 234 IAIEALEQIEGFLKEED 250
IA E L + G LK++D
Sbjct: 178 IATEVLTALAG-LKQKD 193
>gi|357385939|ref|YP_004900663.1| shikimate kinase [Pelagibacterium halotolerans B2]
gi|351594576|gb|AEQ52913.1| Shikimate kinase I [Pelagibacterium halotolerans B2]
Length = 197
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 12/174 (6%)
Query: 45 KNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEI 104
K +SQ ++ L+GR + LVGMMG+GKTTVG+ L+ LG F D D IE + G S+ +I
Sbjct: 12 KAESQVLD-ALAGRPVVLVGMMGAGKTTVGRRLANRLGLPFTDSDAEIETAA-GMSIPDI 69
Query: 105 FKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEAL 163
F +GE FR E V+ +L Q +++TGGGA P ++ +S+W+ + L
Sbjct: 70 FAAHGEPEFRAGEARVISRLLREHQGIIATGGGAFINPETRDAIKTHAVSIWIKADFDLL 129
Query: 164 AQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
R++ RPLL + L L ++R YA A+ V+ ++
Sbjct: 130 FARVSK--RPGRPLLQTPDP-------RGTLQGLIDKRYPVYALADLTVASRDV 174
>gi|312793894|ref|YP_004026817.1| shikimate kinase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312181034|gb|ADQ41204.1| Shikimate kinase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 172
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 100/173 (57%), Gaps = 11/173 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I L G MGSGKTT+GK+++ L D D+ + + G ++ +IF+++GE FRE E
Sbjct: 2 KNIVLTGFMGSGKTTIGKLIAEKLDIELIDTDSEVIKEF-GMTIDKIFEVHGEKKFREVE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
T+V++++S + +V+STGGG V P N + +++ G+ +L E++ +R+ D+RP
Sbjct: 61 TKVIERVSKLENVVISTGGGVVLNPENVKLLRENGVIYFLYASAESILKRLK--DDDTRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 229
LL +SGD L+ + L R Y N + ++ + + +L + + S+
Sbjct: 119 LL---KSGD----KLSNIIKLLNMRMPFYKNCDFEINTDILTPELAAEKIISI 164
>gi|402820785|ref|ZP_10870349.1| hypothetical protein IMCC14465_15830 [alpha proteobacterium
IMCC14465]
gi|402510431|gb|EJW20696.1| hypothetical protein IMCC14465_15830 [alpha proteobacterium
IMCC14465]
Length = 194
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 19/193 (9%)
Query: 44 LKNKSQEIEPYLSGR---CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTS 100
+ K ++++P +G+ + L+GMMG+GK+++GK+L +G F D DT IE++ T
Sbjct: 1 MTRKKKDVKPRPNGKLEKSVILIGMMGAGKSSIGKMLGAHIGARFIDSDTEIEKAAKMT- 59
Query: 101 VAEIFKLYGEGFFREKETEVLQKL----SLMRQLVVSTGGGAVTRPINWRYMQKGISVWL 156
+ EIFKL+GE FR+ E V ++L + A TR I +Q G S+WL
Sbjct: 60 IPEIFKLHGEASFRDGEKRVFKRLLDGPPAIIAAGGGAFANAATREI---ILQSGFSIWL 116
Query: 157 DVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
V E L +R++ + RPLL Q + T L +ER YA A+ V E+
Sbjct: 117 KVNRETLIRRVSK-RPEKRPLLAQGNIEETITR-------LMDERYPVYAEADIVVECED 168
Query: 217 IAVKLGHKDVSSL 229
KD+S +
Sbjct: 169 GQRPQTVKDISDI 181
>gi|74316225|ref|YP_313965.1| shikimate kinase [Thiobacillus denitrificans ATCC 25259]
gi|124053408|sp|Q3SM89.1|AROK_THIDA RecName: Full=Shikimate kinase; Short=SK
gi|74055720|gb|AAZ96160.1| shikimate kinase I [Thiobacillus denitrificans ATCC 25259]
Length = 183
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 17/174 (9%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+YLVG+MG+GKTTVG++L+ G +F+D D IE G + IF++ GE FR +E
Sbjct: 7 LYLVGLMGAGKTTVGRLLAKHYGCTFYDSDHEIEART-GVKIPVIFEIEGEAGFRRREEA 65
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ +L+ + +V++TGGGAV P N +++ G+ ++L E L +R +RPLL
Sbjct: 66 VIAELTTLSGIVLATGGGAVLSPANREHLRTNGLVIYLRGSPEQLCERTR--NDRNRPLL 123
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPV 232
++G+ L +L L+++R Y L ++ V + V+ +T V
Sbjct: 124 ---QTGN----PLAKLRELYQQRDPIYR------ELADVTVDTARQSVAGMTRV 164
>gi|417844417|ref|ZP_12490461.1| Shikimate kinase [Haemophilus haemolyticus M21639]
gi|341956870|gb|EGT83286.1| Shikimate kinase [Haemophilus haemolyticus M21639]
Length = 180
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 84/145 (57%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMDFIDSDAVIEERT-GADISWIFDLEGEEGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ M+ +V+STGGG V + Y+ +GI ++L+ +E QR RP
Sbjct: 64 ERIINELTQMQGIVLSTGGGVVLSKESRNYLSARGIVIYLETTVEKQFQRTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL E+ E L ++ + L+EE
Sbjct: 122 LLQDAENPRQVLEDLAKIRNPLYEE 146
>gi|168217168|ref|ZP_02642793.1| shikimate kinase [Clostridium perfringens NCTC 8239]
gi|182380745|gb|EDT78224.1| shikimate kinase [Clostridium perfringens NCTC 8239]
Length = 171
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 88/151 (58%), Gaps = 14/151 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ R + L+GM G+GKTT+G+ LS VL +F D D IE+S G + E+F GE FR
Sbjct: 1 MKKRGVLLIGMPGAGKTTIGRDLSKVLKMNFLDMDEFIERST-GKEIKELFA-QGEEVFR 58
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++ + LS ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDID---TEG 115
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
RPLL + RL+ L+ +R + Y
Sbjct: 116 RPLLWDGKE---------RLTNLYRDRIDLY 137
>gi|357030301|ref|ZP_09092253.1| hypothetical protein MEA186_35734, partial [Mesorhizobium amorphae
CCNWGS0123]
gi|355532803|gb|EHH02167.1| hypothetical protein MEA186_35734, partial [Mesorhizobium amorphae
CCNWGS0123]
Length = 944
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 17/192 (8%)
Query: 48 SQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKL 107
++EI L+GR + LVGM +GK+++G L+ L F D D +I++ S+++IF++
Sbjct: 741 AKEIFAALNGRPVVLVGMPSAGKSSIGPALARRLRLPFVDTDKIIQKDTR-ISISQIFEV 799
Query: 108 YGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQR 166
+GE FFR+ E V+ L V++TGGGA R + + +K +S+WLD L+ + +R
Sbjct: 800 HGEAFFRDMEAGVIADLLQKGPAVIATGGGAFMREQSRHLIGEKAVSIWLDTRLDVIEKR 859
Query: 167 IAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDV 226
SRPLL +++ L ER YA A+ V V +D
Sbjct: 860 TR--NDTSRPLLQGPNPE-------QKIARLLSERRPFYAQADITV------VPPHQQDR 904
Query: 227 SSLTPVTIAIEA 238
++ P A+ A
Sbjct: 905 KNVDPCVSALHA 916
>gi|344923071|ref|ZP_08776532.1| shikimate kinase [Candidatus Odyssella thessalonicensis L13]
Length = 203
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 54 YLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFF 113
+ + + I LVG+MG+GKT++G+ L+ L FFD D +E + G + EIF +YGE F
Sbjct: 18 FRAPKTIVLVGLMGAGKTSIGRRLAKRLDVEFFDSDHEVEVAA-GCPIKEIFNIYGEDAF 76
Query: 114 REKETEVLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAA 169
R E V+ +L + V++TGGG+ TR + QK ISVWL LE L R++
Sbjct: 77 RVGEYRVINRLLDQQTHVLATGGGSFMEEKTREV---IKQKAISVWLKADLETLVARVSR 133
Query: 170 VGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
TD RPLL E+ + LS L ER Y A+
Sbjct: 134 -RTD-RPLLEDAEAHH------DVLSQLIAERYPVYEGAD 165
>gi|320529773|ref|ZP_08030851.1| shikimate kinase [Selenomonas artemidis F0399]
gi|320138012|gb|EFW29916.1| shikimate kinase [Selenomonas artemidis F0399]
Length = 173
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 97/185 (52%), Gaps = 20/185 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MG+GKT+VG++L+ LG +F D D IE++ G ++ E+F +GE +FR +E E
Sbjct: 4 IVLIGFMGTGKTSVGRLLAARLGCAFHDLDKKIEEA-HGMTIPEMFVRHGEPYFRAREKE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+ + LVV+TGGG V N R ++K GI V L ++ + R AA G RP+L
Sbjct: 63 AVAAAAARGNLVVATGGGVVKDAENMRALRKNGIIVALTADIDTILARTAARG--QRPVL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
+ + GD ++ L EER YA A+ V D + P+ IA
Sbjct: 121 DRADEGDRRAA----VAALMEERRLLYAGADVTV------------DTTGRAPLEIAEHI 164
Query: 239 LEQIE 243
++ I
Sbjct: 165 MQTIR 169
>gi|118592098|ref|ZP_01549492.1| putative shikimate kinase [Stappia aggregata IAM 12614]
gi|118435394|gb|EAV42041.1| putative shikimate kinase [Labrenzia aggregata IAM 12614]
Length = 215
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I LVG+MG GK+TVGK L+ LG F D DT IE++ + SVAEIF +GE +FR
Sbjct: 31 LGHRSIVLVGIMGCGKSTVGKRLAHRLGLEFIDADTEIERAAN-MSVAEIFAEHGEPYFR 89
Query: 115 EKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
E V+ +L V++TGGGA ++ + G+S+WL V + + R+ T
Sbjct: 90 SGEERVIARLLREGSQVLATGGGAFMSEATRSEIAEHGLSIWLKVDFDTVMARVRRRST- 148
Query: 174 SRPLLHQ 180
RPLL
Sbjct: 149 -RPLLQN 154
>gi|334341632|ref|YP_004546612.1| shikimate kinase [Desulfotomaculum ruminis DSM 2154]
gi|334092986|gb|AEG61326.1| Shikimate kinase [Desulfotomaculum ruminis DSM 2154]
Length = 172
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 91/160 (56%), Gaps = 11/160 (6%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MGSGK+T+G L+ L Y F D D IEQ D T VA+IF YG FR +E
Sbjct: 4 IVLIGFMGSGKSTIGNRLARRLRYQFVDTDYEIEQVTDLT-VAQIFAKYGVKRFRGEEAL 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ KL+ + LV++TGGG V +P N ++K GI + L+ E + +R+ +RPLL
Sbjct: 63 LVSKLADRKGLVIATGGGLVIKPENVEQLKKNGILIGLEASPETICKRVR--NKRTRPLL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
+ E + R + EER +AY+ A V+++ +A
Sbjct: 121 ARRN----LQETVER---MLEERKDAYSVAEFTVNVDRLA 153
>gi|357974955|ref|ZP_09138926.1| shikimate kinase [Sphingomonas sp. KC8]
Length = 179
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 10/136 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I L+G+MGSGK+TVG+ L+ L F D D IE + G S+ EIF +GE FR+ E
Sbjct: 14 RPIVLIGLMGSGKSTVGRRLAARLHLPFIDADHEIEVAA-GLSIPEIFARFGEAHFRDGE 72
Query: 118 TEVLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
V+ +L +V+TGGGA TR + + K ++WLD ++ LA R+ D
Sbjct: 73 RRVISRLIDGNPKIVATGGGAFMQDDTRQL---ILDKATAIWLDADIDVLADRVGR--RD 127
Query: 174 SRPLLHQCESGDAYTE 189
RPLL E + E
Sbjct: 128 GRPLLKDREPREVLAE 143
>gi|168209924|ref|ZP_02635549.1| shikimate kinase [Clostridium perfringens B str. ATCC 3626]
gi|170712023|gb|EDT24205.1| shikimate kinase [Clostridium perfringens B str. ATCC 3626]
Length = 167
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 88/151 (58%), Gaps = 14/151 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ R + L+GM G+GKTT+G+ LS VL +F D D IE+S G + E+F GE FR
Sbjct: 1 MKKRGVLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFIERST-GKEIKELFA-QGEEVFR 58
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++ + LS ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDID---TEG 115
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
RPLL + RL+ L+ +R + Y
Sbjct: 116 RPLLWDGKE---------RLTNLYRDRIDLY 137
>gi|118594317|ref|ZP_01551664.1| shikimate kinase [Methylophilales bacterium HTCC2181]
gi|118440095|gb|EAV46722.1| shikimate kinase [Methylophilales bacterium HTCC2181]
Length = 176
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L+G+MGSGKTT+GKI++ L +F D D LIE+ G V IF+ GE FR++E
Sbjct: 8 IFLIGLMGSGKTTIGKIVAKKLQLNFMDSDVLIEEKT-GVKVPLIFEYEGEEGFRKREAS 66
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
L +L++ +V++TGGG V N + + + G +L + LA+R+A SRPLL
Sbjct: 67 TLIELAIKNDMVLATGGGIVLLEENRKLLVESGWVFYLKAHTDELARRLA--NDKSRPLL 124
Query: 179 HQCESGDAYTEALNRLSTLWE 199
+ + E L L+E
Sbjct: 125 QHVDVKEKLNELLASREALYE 145
>gi|410097075|ref|ZP_11292059.1| shikimate kinase [Parabacteroides goldsteinii CL02T12C30]
gi|409224869|gb|EKN17793.1| shikimate kinase [Parabacteroides goldsteinii CL02T12C30]
Length = 173
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 101/184 (54%), Gaps = 16/184 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L+G MG+GKTTVGK L+ +G SF D D IE T V +IF GE FR+ E
Sbjct: 4 IFLIGYMGAGKTTVGKDLAKRMGLSFIDLDCYIEARYHKT-VGQIFAEKGEEAFRDIERR 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L ++++ +++STGGGA N +M + G +V+L V +E LA+R+ + +RP+L
Sbjct: 63 MLHEVAMFEDVLISTGGGAPCFFDNMEFMNETGSTVYLKVSVEELAKRL-EICKSTRPVL 121
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
+ SGD E + ++ E+R Y A+ E V L DV ++ EA
Sbjct: 122 -KGRSGD---ELVAFIAESLEKRTPHYMKASIVFDAE---VMLTETDVHEIS------EA 168
Query: 239 LEQI 242
LE+I
Sbjct: 169 LEKI 172
>gi|340361239|ref|ZP_08683672.1| shikimate kinase [Neisseria macacae ATCC 33926]
gi|339888867|gb|EGQ78292.1| shikimate kinase [Neisseria macacae ATCC 33926]
Length = 173
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 11/150 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G+MG+GKTT+G+ ++ +L F+D D I + G S+ IF++ GE FR +ET
Sbjct: 11 LILIGLMGAGKTTLGRYIAQMLDRPFYDSDHEI-CTASGVSIPIIFEMEGEQGFRNRETA 69
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+KL+ M+ +++STGGG+V R N + M++ G V+L E L +R SRPLL
Sbjct: 70 MLKKLTAMKDIILSTGGGSVLREENRQNMRRNGTVVYLHASPEVLLERTRY--DSSRPLL 127
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANA 208
Q E+ L +L L+ R Y N
Sbjct: 128 -QVEN------PLAKLQELYNARDPLYRNT 150
>gi|363895179|ref|ZP_09322199.1| hypothetical protein HMPREF9629_00497 [Eubacteriaceae bacterium
ACC19a]
gi|361959936|gb|EHL13197.1| hypothetical protein HMPREF9629_00497 [Eubacteriaceae bacterium
ACC19a]
Length = 412
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 105/197 (53%), Gaps = 25/197 (12%)
Query: 23 SLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLG 82
++ A+ L +G + E ++++N + I I ++GM GSGKTT+GK +S + G
Sbjct: 222 AIKAAELFTGKKYDANIEDKIIENLKKNISN------IVIIGMPGSGKTTIGKEISKISG 275
Query: 83 YSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRP 142
D D +IE+ G +++IF+ YGE +FR+KE EV+ ++ ++STGGG++
Sbjct: 276 KKSVDIDEIIERET-GKDISQIFRDYGEEYFRQKEKEVISRIGKENNQIISTGGGSILDY 334
Query: 143 INWRYMQKGISV-WLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEER 201
N+ +++ + ++ PL+ LA D RPL SG +N L L+E+R
Sbjct: 335 ENYLSLKQNSRIYYIKRPLDKLA-------VDGRPL----SSG-----GINVLEKLYEQR 378
Query: 202 GEAYAN-ANARVSLENI 217
Y N A+ + +NI
Sbjct: 379 HTLYENFADFEIDNDNI 395
>gi|18309683|ref|NP_561617.1| shikimate kinase [Clostridium perfringens str. 13]
gi|18144360|dbj|BAB80407.1| shikimate kinase [Clostridium perfringens str. 13]
Length = 171
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 88/151 (58%), Gaps = 14/151 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ R + L+GM G+GKTT+G+ LS VL +F D D IE+S G + E+F GE FR
Sbjct: 1 MKKRGVLLIGMPGAGKTTIGRELSKVLKMNFLDMDEFIERST-GKEIKELFA-QGEEVFR 58
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++ + LS ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDID---TEG 115
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
RPLL + RL+ L+ +R + Y
Sbjct: 116 RPLLWDGKE---------RLTNLYRDRIDLY 137
>gi|302871544|ref|YP_003840180.1| shikimate kinase [Caldicellulosiruptor obsidiansis OB47]
gi|302574403|gb|ADL42194.1| Shikimate kinase [Caldicellulosiruptor obsidiansis OB47]
Length = 172
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 100/173 (57%), Gaps = 11/173 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I L G MGSGKTT+GK+++ L D D+ + + + G ++ +IF++YGE FRE E
Sbjct: 2 KNIVLTGFMGSGKTTIGKLIAEKLDIELIDTDSEVIKEL-GMTIDKIFEVYGEKKFREVE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
T V++++S + +V+STGGG V P N + +++ G+ +L E++ +R+ D+RP
Sbjct: 61 TMVIERVSKLENVVISTGGGVVLNPENVKLLRENGVIYFLYASAESILKRLK--DDDTRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 229
LL ++GD L+ + L R Y N + ++ + + +L + + S+
Sbjct: 119 LL---KNGD----KLSNIIRLLNMRMPFYKNCDFEINTDILTPELAAEKIISI 164
>gi|255533540|ref|YP_003093912.1| shikimate kinase [Pedobacter heparinus DSM 2366]
gi|255346524|gb|ACU05850.1| Shikimate kinase [Pedobacter heparinus DSM 2366]
Length = 169
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 80/137 (58%), Gaps = 3/137 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L+G MG GK+T+GK L+ LGY F D D IE+++ G ++ F +GE FR+ E++
Sbjct: 4 IFLIGFMGCGKSTMGKKLAVKLGYDFVDLDQQIEKNI-GKTIGAYFSEHGEAAFRKLESD 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
L+ +V++TGGGA N +M G+++++++P ALA+R+ + G + RPLL
Sbjct: 63 TLKHFDYPANVVIATGGGAPCFFDNMDWMNANGLTMYIEMPPAALAKRLES-GKEKRPLL 121
Query: 179 HQCESGDAYTEALNRLS 195
NRL+
Sbjct: 122 RDLNEAQMIEFIENRLA 138
>gi|110800453|ref|YP_695146.1| shikimate kinase [Clostridium perfringens ATCC 13124]
gi|422345138|ref|ZP_16426052.1| hypothetical protein HMPREF9476_00125 [Clostridium perfringens
WAL-14572]
gi|110675100|gb|ABG84087.1| shikimate kinase [Clostridium perfringens ATCC 13124]
gi|373227863|gb|EHP50173.1| hypothetical protein HMPREF9476_00125 [Clostridium perfringens
WAL-14572]
Length = 167
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 88/151 (58%), Gaps = 14/151 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ R + L+GM G+GKTT+G+ LS VL +F D D IE+S G + E+F GE FR
Sbjct: 1 MKKRGVLLIGMPGAGKTTIGRDLSTVLKMNFLDMDEFIERST-GKEIKELFA-QGEEVFR 58
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++ + LS ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDID---TEG 115
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
RPLL + RL+ L+ +R + Y
Sbjct: 116 RPLLWDGKE---------RLTNLYRDRIDLY 137
>gi|399925231|ref|ZP_10782589.1| shikimate kinase [Peptoniphilus rhinitidis 1-13]
Length = 503
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 85/149 (57%), Gaps = 19/149 (12%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM SGKTT+GK+LS L FFD D LIE+ + SV+EIF+ GE +FR+ ET+
Sbjct: 342 IILIGMPSSGKTTMGKLLSKKLNREFFDTDNLIEEE-ENLSVSEIFENKGEKYFRDLETK 400
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+++S +V++TGGG + +N +Q I ++L+ +E L T RPL
Sbjct: 401 ILEEVSKKNGIVIATGGGTPIKEVNRDMILQNSIVIYLNRNIEKLE-------TFGRPL- 452
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYAN 207
++ L L ++++R Y++
Sbjct: 453 ---------SKNLKTLEKMYDKRNPIYSD 472
>gi|443725060|gb|ELU12790.1| hypothetical protein CAPTEDRAFT_143972 [Capitella teleta]
Length = 173
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL+G MG+GK+T+G++L+ L F D D +IE G + IF + GE FR++E++
Sbjct: 6 IYLIGPMGAGKSTIGRMLAKELARPFLDSDHVIEDR-SGADIPWIFDVEGEQGFRDRESQ 64
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V++++ + L+++TGGG V RP N R + G V+L P+ QR RPLL
Sbjct: 65 VIEEICSQKGLIMATGGGVVGRPENRRNLSSNGFVVYLSAPVTVQLQRTEK--DKRRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLW 198
+ + + T L L+
Sbjct: 123 QRPDREEVLTRLLEERDPLY 142
>gi|395783732|ref|ZP_10463581.1| shikimate kinase [Bartonella melophagi K-2C]
gi|395425854|gb|EJF92014.1| shikimate kinase [Bartonella melophagi K-2C]
Length = 195
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 89/161 (55%), Gaps = 11/161 (6%)
Query: 54 YLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFF 113
+L+ + + VG+MGSGK+ +GK ++ +L F+D D IE++ T + ++F++YGE F
Sbjct: 21 HLNQQTLVFVGLMGSGKSVIGKHVATMLSLPFYDSDQEIEKAAQMT-ITQLFEMYGESKF 79
Query: 114 REKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGT 172
R E +V+ + L+++TGGGA + I Q GIS+WL L L +R++
Sbjct: 80 RALEQKVILNIIKKGPLILATGGGAYINENIRKAIHQNGISIWLKADLHVLIERVSRCF- 138
Query: 173 DSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
+RPLL Q E+ + L E+R YA AN ++
Sbjct: 139 -ARPLL-QTENPKE------TMQKLMEQRYPIYAQANLTIN 171
>gi|402839405|ref|ZP_10887895.1| putative shikimate dehydrogenase [Eubacteriaceae bacterium OBRC8]
gi|402270307|gb|EJU19574.1| putative shikimate dehydrogenase [Eubacteriaceae bacterium OBRC8]
Length = 412
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 105/197 (53%), Gaps = 25/197 (12%)
Query: 23 SLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLG 82
++ A+ L +G + E ++++N + I I ++GM GSGKTT+GK +S + G
Sbjct: 222 AVKAAELFTGKKYDANIEDKIIENLKKNISN------IVIIGMPGSGKTTIGKEISKISG 275
Query: 83 YSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRP 142
D D +IE+ G +++IF+ YGE +FR+KE EV+ ++ ++STGGG++
Sbjct: 276 KKSVDIDEIIERET-GKDISQIFRDYGEEYFRQKEKEVISRIGKENNQIISTGGGSILDY 334
Query: 143 INWRYMQKGISV-WLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEER 201
N+ +++ + ++ PL+ LA D RPL SG +N L L+E+R
Sbjct: 335 ENYLSLKQNSRIYYIKRPLDKLA-------VDGRPL----SSG-----GINVLEKLYEQR 378
Query: 202 GEAYAN-ANARVSLENI 217
Y N A+ + +NI
Sbjct: 379 HSLYENFADFEIDNDNI 395
>gi|313677795|ref|YP_004055791.1| shikimate kinase [Marivirga tractuosa DSM 4126]
gi|312944493|gb|ADR23683.1| Shikimate kinase [Marivirga tractuosa DSM 4126]
Length = 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 83/151 (54%), Gaps = 7/151 (4%)
Query: 61 YLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEV 120
+L+G+ GSGK+ G+I S L FFD D +I ++ +G S+ EIFK GE FR ET
Sbjct: 4 FLLGLPGSGKSHWGRIWSKKLKLPFFDLDEVIVEN-EGNSINEIFKNEGEEHFRNLETFY 62
Query: 121 LQKL-SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVG-TDSRPL 177
LQKL + L++STGGG N M +KGIS++L+ P+E +A R+ RPL
Sbjct: 63 LQKLIANYSSLILSTGGGTPCFRDNLLLMNEKGISIFLNPPIEEIANRVWNPNEIIKRPL 122
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANA 208
C S E L RL+ E+R Y A
Sbjct: 123 FSDCNSIKDVQEVLQRLN---EDRIPIYQKA 150
>gi|304413438|ref|ZP_07394911.1| shikimate kinase I [Candidatus Regiella insecticola LSR1]
gi|304284281|gb|EFL92674.1| shikimate kinase I [Candidatus Regiella insecticola LSR1]
Length = 186
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 95/167 (56%), Gaps = 12/167 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L FFD D IEQ G VA +F + GE FR++E
Sbjct: 17 RNIFLVGPMGAGKSTIGRQLAQQLNMEFFDSDQQIEQRT-GADVAWVFDVEGEDGFRDRE 75
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SR 175
+++ +L+ + +V++TGGG+V +R R +G+ V+L+ +E +++A D R
Sbjct: 76 EKIINELTEKQGIVLATGGGSVKSRETCNRLSARGVVVYLETTIE---KQLARTQRDKKR 132
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYAN-ANARVSLENIAVKL 221
PLL Q + A + L TL ER Y A+ + ++ + KL
Sbjct: 133 PLLQQADES-----ARHILETLAAEREPLYQKIADVTIRTDDQSAKL 174
>gi|126736335|ref|ZP_01752077.1| shikimate kinase, putative [Roseobacter sp. CCS2]
gi|126714156|gb|EBA11025.1| shikimate kinase, putative [Roseobacter sp. CCS2]
Length = 185
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 90/170 (52%), Gaps = 11/170 (6%)
Query: 50 EIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYG 109
E +PY R + LVGMMGSGKT +G+ L+ L F D D IE++ T + G
Sbjct: 3 EGQPYRLKRTVVLVGMMGSGKTAIGRALAAALDVPFLDSDAAIEEAAAATIAEIFAR-DG 61
Query: 110 EGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIA 168
E FFR++E EVL++L +VSTGGGA N + K G++VWLD +E L R+
Sbjct: 62 EKFFRKREAEVLRRLLSGPPGIVSTGGGAFLAEANRDAIAKMGVAVWLDADIEILWDRVR 121
Query: 169 AVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
D+RPLL Q + A L ++ ER Y A ++ ++N A
Sbjct: 122 H--KDTRPLL-QTDDPKAT------LMKIYNERTPVYNLAGLKIGVKNHA 162
>gi|329118842|ref|ZP_08247538.1| shikimate kinase [Neisseria bacilliformis ATCC BAA-1200]
gi|327465033|gb|EGF11322.1| shikimate kinase [Neisseria bacilliformis ATCC BAA-1200]
Length = 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 17/172 (9%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++L+G+MG+GKTT+G+ L+ L +F+D D +I + G SV IF++ GE FR +E
Sbjct: 8 LFLIGLMGAGKTTLGRRLAAQLNRAFYDSDQVICERT-GVSVPTIFEMEGEAGFRAREAA 66
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ +LS + +V++TGGGAV R N R + +G ++L E L +R + +RPLL
Sbjct: 67 VINELSALSGIVLATGGGAVLREENRRCLAARGTVIYLHAAPEILLERTRS--DKNRPLL 124
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLT 230
+ L +L L+ R Y A ++ V+ G D T
Sbjct: 125 Q-------VADPLAKLRALYHARDPLYRAA------ADLVVEAGQNDCRKTT 163
>gi|15603089|ref|NP_246161.1| shikimate kinase [Pasteurella multocida subsp. multocida str. Pm70]
gi|378775730|ref|YP_005177973.1| shikimate kinase [Pasteurella multocida 36950]
gi|383311821|ref|YP_005364631.1| shikimate kinase [Pasteurella multocida subsp. multocida str. HN06]
gi|386835775|ref|YP_006241095.1| shikimate kinase [Pasteurella multocida subsp. multocida str. 3480]
gi|417851230|ref|ZP_12496995.1| shikimate kinase [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
gi|417854010|ref|ZP_12499338.1| shikimate kinase [Pasteurella multocida subsp. multocida str.
Anand1_goat]
gi|421263971|ref|ZP_15714980.1| shikimate kinase [Pasteurella multocida subsp. multocida str.
P52VAC]
gi|425063917|ref|ZP_18467042.1| Shikimate kinase I [Pasteurella multocida subsp. gallicida X73]
gi|425066087|ref|ZP_18469207.1| Shikimate kinase I [Pasteurella multocida subsp. gallicida P1059]
gi|13431306|sp|P57925.1|AROK_PASMU RecName: Full=Shikimate kinase; Short=SK
gi|12721579|gb|AAK03308.1| AroK [Pasteurella multocida subsp. multocida str. Pm70]
gi|338218642|gb|EGP04399.1| shikimate kinase [Pasteurella multocida subsp. multocida str.
Anand1_goat]
gi|338219838|gb|EGP05445.1| shikimate kinase [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
gi|356598278|gb|AET17004.1| Shikimate kinase [Pasteurella multocida 36950]
gi|380873093|gb|AFF25460.1| shikimate kinase [Pasteurella multocida subsp. multocida str. HN06]
gi|385202481|gb|AFI47336.1| shikimate kinase [Pasteurella multocida subsp. multocida str. 3480]
gi|401688838|gb|EJS84381.1| shikimate kinase [Pasteurella multocida subsp. multocida str.
P52VAC]
gi|404382471|gb|EJZ78932.1| Shikimate kinase I [Pasteurella multocida subsp. gallicida X73]
gi|404382627|gb|EJZ79087.1| Shikimate kinase I [Pasteurella multocida subsp. gallicida P1059]
Length = 175
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 84/145 (57%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+L+G MG+GK+T+G+ L+ +L F D D IEQ G ++ IF + GE FR++E
Sbjct: 5 RNIFLIGPMGAGKSTIGRQLAQLLSMDFVDSDNEIEQRA-GADISWIFDVEGEDGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ + +V+STGGGAV N ++ +GI ++L+ +E QR RP
Sbjct: 64 ERIINELTQRQGIVLSTGGGAVLSKENRNHLSARGIVIYLETTVEKQYQRTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL + E E L ++ + L+EE
Sbjct: 122 LLQEVEDPRQVLEDLAKIRNPLYEE 146
>gi|85816921|gb|EAQ38106.1| Shikimate kinase [Dokdonia donghaensis MED134]
Length = 173
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 92/161 (57%), Gaps = 9/161 (5%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYLVG MGSGK+T+G +L+ VL Y F D DT I Q +G S++EIFK GE +FR+ E+
Sbjct: 3 IYLVGYMGSGKSTIGPLLAEVLSYKFIDFDTYITQK-EGMSISEIFKNKGEIYFRKAEST 61
Query: 120 VLQKL--SLMRQLVVSTGGGAVTRPINWRYMQ--KGISVWLDVPLEALAQRIAAVGTDSR 175
LQ+L Q+VV+ GGG N + ++ +V+L+ + LAQR+ + + R
Sbjct: 62 YLQQLLEEESEQVVVALGGGTPCYGTNLQVLKDSDAQTVYLNWHFKTLAQRLWS-AKEER 120
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
PL+ +S Y + + + ERG Y ++ + +E+
Sbjct: 121 PLIASMQS---YEDLEDYVRKHLFERGFYYNQSDLVLKIED 158
>gi|440747621|ref|ZP_20926878.1| Shikimate kinase I [Mariniradius saccharolyticus AK6]
gi|436484091|gb|ELP40111.1| Shikimate kinase I [Mariniradius saccharolyticus AK6]
Length = 166
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 7/161 (4%)
Query: 62 LVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL 121
++G+ GSGK+T G++++ L ++F D D +IE G + EIF+ GEG FRE E++ L
Sbjct: 1 MLGLPGSGKSTFGRLIARKLNFAFVDLDQVIETET-GKKIREIFQEEGEGKFRELESQYL 59
Query: 122 QK-LSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
+K L+ + V++TGGG N + QKGISV+LDV LE + +R+ RPL
Sbjct: 60 EKVLNGVEGFVLATGGGTPCFNDNMDLINQKGISVYLDVSLEEIFRRLHKDDGGKRPLFA 119
Query: 180 QCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 220
+ G E + +L L ER Y A ++S ++++ +
Sbjct: 120 GLDEG----EMILKLKNLLAEREYFYNQAKIKLSGDDVSTE 156
>gi|237747397|ref|ZP_04577877.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacter formigenes HOxBLS]
gi|229378748|gb|EEO28839.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacter formigenes HOxBLS]
Length = 559
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 76/121 (62%), Gaps = 4/121 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVG+MGSGKTTVG++L+ LG F D D IE G +++ IF++ GE FR +E E
Sbjct: 5 IFLVGLMGSGKTTVGRLLAKRLGLRFVDSDHEIEART-GATISWIFEIEGEESFRRREVE 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ L+ +V++TGGGAV P N ++++ +G ++L + + QR + SRPLL
Sbjct: 64 TIKDLTGQTGVVLATGGGAVVHPDNRKHLKSRGTVIYLRASVNNILQR--TMHDKSRPLL 121
Query: 179 H 179
Sbjct: 122 Q 122
>gi|452126823|ref|ZP_21939406.1| shikimate kinase [Bordetella holmesii F627]
gi|452130196|ref|ZP_21942769.1| shikimate kinase [Bordetella holmesii H558]
gi|451921918|gb|EMD72063.1| shikimate kinase [Bordetella holmesii F627]
gi|451923056|gb|EMD73200.1| shikimate kinase [Bordetella holmesii H558]
Length = 211
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVGMMG+GKTT+G+ L+ LG F D D +E G V IF++ GE FR++E+
Sbjct: 42 IFLVGMMGAGKTTIGRGLARALGREFIDLDHELEARC-GVRVPVIFEIEGEAGFRKRESS 100
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
LQ+ + R ++++TGGGAV N R + Q+GI ++L ++ L +R +RPLL
Sbjct: 101 ALQECTQRRAIILATGGGAVLAEDNRRLLRQRGIVMYLRASVDELYRRTCR--DRNRPLL 158
Query: 179 HQCESGDAYTEALNRLSTLWEE 200
+ + + R L+ E
Sbjct: 159 ATADPRGTLRDLMIRREPLYTE 180
>gi|372268165|ref|ZP_09504213.1| shikimate kinase [Alteromonas sp. S89]
Length = 174
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 11/148 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVG MG+GK+T+GK+L+ LG F D D ++E G + IF + GE FR +E+E
Sbjct: 6 IFLVGPMGAGKSTIGKLLAAQLGLPFADSDKVLEDRT-GADIPWIFDVEGEAGFRRRESE 64
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL+ L V++TGGG V +P N ++ G V+L L+ L +R + +RPLL
Sbjct: 65 VLRDLCNGEVQVIATGGGIVLKPENRELLKHGGFIVYLRASLDQLVERTSK--NSNRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYA 206
Q E A +L+ + E+RG YA
Sbjct: 123 -QVEDPRA------KLAEILEQRGAFYA 143
>gi|46201488|ref|ZP_00054967.2| COG0703: Shikimate kinase [Magnetospirillum magnetotacticum MS-1]
Length = 191
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 84/155 (54%), Gaps = 11/155 (7%)
Query: 44 LKNKSQEIEPYLSGR---CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTS 100
+ ++ + P LSGR + LVG+MG+GK+ VG+ L+ LG F D D E + G++
Sbjct: 1 MADELARLAPLLSGRIGRTVVLVGLMGAGKSCVGRRLAARLGLDFQDSDAEFE-AASGST 59
Query: 101 VAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVP 159
+++ F +GE FR E +V+ +L ++++TGGGA P R G SVW+
Sbjct: 60 ISDYFARFGEAAFRVGERKVIARLLDGPPVILATGGGAFVDPATRQRIKDTGTSVWIRAD 119
Query: 160 LEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRL 194
LE L +R VG D RPLL Q + E L RL
Sbjct: 120 LELLLKR--TVGRDHRPLLKQGDP----REILGRL 148
>gi|416963599|ref|ZP_11936491.1| shikimate kinase [Burkholderia sp. TJI49]
gi|325521796|gb|EGD00532.1| shikimate kinase [Burkholderia sp. TJI49]
Length = 184
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 77/133 (57%), Gaps = 5/133 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++ VG+MG+GKTTVG+ ++ L +FFD D IE G + IF+L GE FR++ET+
Sbjct: 10 VFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEIEART-GARIPVIFELEGEAGFRDRETQ 68
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ L+ +V++TGGGAV RP N + Q GI V+L L R +RPLL
Sbjct: 69 VIADLTQRESIVLATGGGAVLRPENRECLKQHGIVVYLRANPHDLWLRTRK--DKNRPLL 126
Query: 179 HQCESGDAYTEAL 191
Q E A EAL
Sbjct: 127 -QTEDPKARLEAL 138
>gi|310815564|ref|YP_003963528.1| shikimate kinase [Ketogulonicigenium vulgare Y25]
gi|308754299|gb|ADO42228.1| shikimate kinase [Ketogulonicigenium vulgare Y25]
Length = 183
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Query: 54 YLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFF 113
Y + + LVGMMGSGKT VG+ ++ L F D D IE + T +AEIF GE FF
Sbjct: 5 YHLHKAVALVGMMGSGKTAVGRAIAQRLSVPFRDSDQAIEAAAQST-IAEIFARDGEPFF 63
Query: 114 REKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGT 172
R++E EV+ +L ++STGGGA N ++ G+++WLD + L +R+
Sbjct: 64 RDREAEVIARLLTDEPAIISTGGGAFLAARNREKIEGAGVALWLDASVGILWERVR--HR 121
Query: 173 DSRPLLH 179
D+RPLL
Sbjct: 122 DTRPLLR 128
>gi|354598807|ref|ZP_09016824.1| Shikimate kinase [Brenneria sp. EniD312]
gi|353676742|gb|EHD22775.1| Shikimate kinase [Brenneria sp. EniD312]
Length = 173
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 80/142 (56%), Gaps = 10/142 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I++VG G GKTTVG L+ LGY F D D ++QS +VAEI G FR++E+
Sbjct: 5 IFMVGARGCGKTTVGSRLAQALGYEFIDTDLFMQQS-GRMTVAEIVAQEGWQGFRQRESR 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDS---- 174
VLQ+++ R+ VV+TGGG V +N R+M KG V+L P E LA+R+ A D
Sbjct: 64 VLQEVTACRR-VVATGGGIVLSALNRRFMGDKGSVVYLHAPAELLARRLEASPLDHQRPT 122
Query: 175 ---RPLLHQCESGDAYTEALNR 193
RP+ + A EAL R
Sbjct: 123 LTGRPIAEEMADVLAAREALYR 144
>gi|110802259|ref|YP_698020.1| shikimate kinase [Clostridium perfringens SM101]
gi|110682760|gb|ABG86130.1| shikimate kinase [Clostridium perfringens SM101]
Length = 167
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 88/151 (58%), Gaps = 14/151 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ R + L+GM G+GKTT+G+ LS VL +F D D IE+S G + E+F GE FR
Sbjct: 1 MKKRGVLLIGMPGAGKTTIGRELSTVLKMNFLDMDEFIERST-GKEIKELFA-QGEEVFR 58
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++ + LS ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDI---DTEG 115
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
RPLL + RL+ L+ +R + Y
Sbjct: 116 RPLLWDGKE---------RLTNLYRDRIDLY 137
>gi|381201221|ref|ZP_09908350.1| shikimate kinase [Sphingobium yanoikuyae XLDN2-5]
gi|427410898|ref|ZP_18901100.1| hypothetical protein HMPREF9718_03574 [Sphingobium yanoikuyae ATCC
51230]
gi|425710886|gb|EKU73906.1| hypothetical protein HMPREF9718_03574 [Sphingobium yanoikuyae ATCC
51230]
Length = 182
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 75/134 (55%), Gaps = 10/134 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GMMG GK+TVG+ L+ LG SF D D IE++ G SV+EIF YGE FR+ E
Sbjct: 17 IVLIGMMGVGKSTVGRRLAARLGLSFVDADEEIERAA-GMSVSEIFARYGEAHFRDGERR 75
Query: 120 VLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSR 175
V+ +L V++TGGGA TR + + ++WLD +E L R++ + R
Sbjct: 76 VIARLMDGVPKVIATGGGAFMQDETRAL---ILDHATTIWLDADIEVLVDRVSR--REGR 130
Query: 176 PLLHQCESGDAYTE 189
PLL + TE
Sbjct: 131 PLLKDRDPRIVLTE 144
>gi|404372139|ref|ZP_10977438.1| hypothetical protein CSBG_00552 [Clostridium sp. 7_2_43FAA]
gi|226911725|gb|EEH96926.1| hypothetical protein CSBG_00552 [Clostridium sp. 7_2_43FAA]
Length = 163
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 85/149 (57%), Gaps = 15/149 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM G GK+T+G+ L+ + Y F D D IE+ + ++V E+F + E +FR+ ET
Sbjct: 6 ILLIGMPGCGKSTIGEELANKINYDFCDMDKYIEE-ISNSTVKELFNI-SEEYFRDYETL 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++LS ++++S+GGG + R N + + KGI +++D P+E + + I T SRPLL
Sbjct: 64 ACKELSNKSKIIISSGGGVIKRKKNIDFFKDKGIIIFIDRPIEDILKDI---DTSSRPLL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYAN 207
+S +L L+ ER Y N
Sbjct: 121 SDGKS---------KLYNLYSERYNLYNN 140
>gi|15894185|ref|NP_347534.1| shikimate kinase [Clostridium acetobutylicum ATCC 824]
gi|337736115|ref|YP_004635562.1| shikimate kinase [Clostridium acetobutylicum DSM 1731]
gi|384457624|ref|YP_005670044.1| shikimate kinase [Clostridium acetobutylicum EA 2018]
gi|15023796|gb|AAK78874.1|AE007605_7 Shikimate kinase [Clostridium acetobutylicum ATCC 824]
gi|325508313|gb|ADZ19949.1| Shikimate kinase [Clostridium acetobutylicum EA 2018]
gi|336292150|gb|AEI33284.1| shikimate kinase [Clostridium acetobutylicum DSM 1731]
Length = 165
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 84/147 (57%), Gaps = 15/147 (10%)
Query: 62 LVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL 121
L+GM G GK+T+GKILS L F+D D +E + ++++FK GE FFR E+ L
Sbjct: 5 LIGMPGCGKSTIGKILSKELNMKFYDADKYLEDR-NNMKISDMFK-RGEEFFRNLESAAL 62
Query: 122 QKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
++LS V++TGGGAVTR N + +KG V+++ P E + + V ++RPLL
Sbjct: 63 KELSFEENSVIATGGGAVTREKNILCLKKKGKIVFINRPPEKIME---DVDIENRPLLEH 119
Query: 181 CESGDAYTEALNRLSTLWEERGEAYAN 207
+S R+ L+EER + Y N
Sbjct: 120 GKS---------RILKLYEERYKLYIN 137
>gi|89054977|ref|YP_510428.1| shikimate kinase [Jannaschia sp. CCS1]
gi|88864526|gb|ABD55403.1| shikimate kinase [Jannaschia sp. CCS1]
Length = 190
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 85/158 (53%), Gaps = 11/158 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R + L+GMMG+GKT +G+ LS LG D DT I QS T +AEIF+ +GE FFREKE
Sbjct: 14 RSVVLIGMMGAGKTAIGRALSASLGVPMRDSDTEIVQSAQLT-IAEIFERFGESFFREKE 72
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRP 176
+V+ +L ++STGGGA N + + VWL+ L L R+ RP
Sbjct: 73 GQVIARLLDGPPCILSTGGGAWLSEANREMLLARASVVWLEADLPLLWSRVKH--KSHRP 130
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
LL + E A L+ L E R +YA A +V++
Sbjct: 131 LL-RTEDPRAT------LAALLEARTPSYALAPHKVTV 161
>gi|90422056|ref|YP_530426.1| shikimate kinase [Rhodopseudomonas palustris BisB18]
gi|90104070|gb|ABD86107.1| shikimate kinase [Rhodopseudomonas palustris BisB18]
Length = 206
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 38 IDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVD 97
+ A L EI L R I LVGMMG+GK+TVG+ L+ L F D DT IE +
Sbjct: 5 VSSASPLTAAEAEIVAALGRRPIVLVGMMGAGKSTVGRRLATRLHLPFVDADTEIEAAA- 63
Query: 98 GTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWL 156
G ++AEIF +GE +FR+ E V+ +L V++TGGGA R R + +S+WL
Sbjct: 64 GMTIAEIFANHGEPYFRDGEARVIARLLDNGPHVLATGGGAFMRDDTRLRIAAQAVSLWL 123
Query: 157 DVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
+ + +RI RPLL + + L ER Y +A+ ++ +
Sbjct: 124 HAEADVILRRIKRRA--DRPLLKTADPA-------ATIDRLIAERYPVYQSADLTIASRD 174
Query: 217 I 217
+
Sbjct: 175 V 175
>gi|91974774|ref|YP_567433.1| shikimate kinase [Rhodopseudomonas palustris BisB5]
gi|91681230|gb|ABE37532.1| shikimate kinase [Rhodopseudomonas palustris BisB5]
Length = 204
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 11/178 (6%)
Query: 41 AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTS 100
A +++ EI L R + L+GMMG+GK+TVG+ L+ LG F D DT IE S +
Sbjct: 8 ADAARSQEAEIVAALGERAVVLIGMMGAGKSTVGRRLALRLGLPFLDADTEIE-SAAAMT 66
Query: 101 VAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVP 159
+ EIF +GE FR+ E V+ +L V++TGGGA R R K +S+WL+
Sbjct: 67 IPEIFDTHGEPHFRDGEARVIARLLDGGAKVLATGGGAFMREETRDRIRDKAVSLWLEAD 126
Query: 160 LEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
+ + +R+ RPLL + ++ L +ER Y +A+ ++ ++
Sbjct: 127 ADVILRRVKRRA--DRPLLKTPDPA-------GTIARLIDERYPVYRSADLTIASRDV 175
>gi|386285836|ref|ZP_10063043.1| shikimate kinase [gamma proteobacterium BDW918]
gi|385281110|gb|EIF45015.1| shikimate kinase [gamma proteobacterium BDW918]
Length = 178
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 7/174 (4%)
Query: 59 CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKET 118
++LVG MG+GK+T+G++L+ L + F D D IE+ G + IF + GE FR++E
Sbjct: 6 AVFLVGPMGAGKSTIGRLLAETLRFEFCDVDREIEER-SGVDIPWIFDMEGEEGFRDREE 64
Query: 119 EVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPL 177
+L +LS Q+V+STGGGAV R ++ + M +G ++L +E +R A RPL
Sbjct: 65 SMLSELSDGSQVVISTGGGAVLRSVSRKLMVARGTVIYLKTSVEEQVRRTAR--DRKRPL 122
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYA---NANARVSLENIAVKLGHKDVSS 228
L + G + L+EE + N + ++ + +LG D+S+
Sbjct: 123 LQNGDPGTTLRNLMALREPLYEEIADYTVLTDNRTPKSVVQELCEQLGASDLSA 176
>gi|383641000|ref|ZP_09953406.1| shikimate kinase [Sphingomonas elodea ATCC 31461]
Length = 179
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 56 SGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFRE 115
+G+ I LVG+MG+GKTTVG+ L+ L F D D IE S G SV++IF +GE FR+
Sbjct: 12 TGKPIVLVGLMGAGKTTVGRRLAQRLRLPFVDADAEIE-SAAGMSVSDIFAKFGEPHFRD 70
Query: 116 KETEVLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVG 171
E V+ +L V++TGGGA TR + + + IS+WLD LA R+
Sbjct: 71 GERRVIARLVDGTPKVIATGGGAFINDETRAL---ILGQAISIWLDAEPTVLADRVRR-- 125
Query: 172 TDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
D+RPLL + L L+ L R YA A RV
Sbjct: 126 RDTRPLLRG-------KDPLATLTELARVRNPYYALAEIRV 159
>gi|206890501|ref|YP_002248005.1| shikimate kinase [Thermodesulfovibrio yellowstonii DSM 11347]
gi|238058104|sp|B5YHI3.1|AROK_THEYD RecName: Full=Shikimate kinase; Short=SK
gi|206742439|gb|ACI21496.1| shikimate kinase [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 173
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 84/142 (59%), Gaps = 4/142 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MG+GKT+VGK+++ LG+ F D D +IE++ G ++EIF +GE FR+ E E
Sbjct: 4 IVLIGFMGTGKTSVGKLVAKKLGFDFVDVDEVIEKAT-GMEISEIFSKFGESRFRDIEEE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+++ ++ ++ V++TGGG V R N + ++K G+ L + +R+ T +RPLL
Sbjct: 63 MIKLITPKKRQVIATGGGVVLRDENMKRLKKDGVIFCLRASENVIFERLKQ--TTNRPLL 120
Query: 179 HQCESGDAYTEALNRLSTLWEE 200
+ E L + L+E+
Sbjct: 121 QVENPEERIKELLQKRMPLYEK 142
>gi|189485286|ref|YP_001956227.1| shikimate kinase [uncultured Termite group 1 bacterium phylotype
Rs-D17]
gi|170287245|dbj|BAG13766.1| shikimate kinase [uncultured Termite group 1 bacterium phylotype
Rs-D17]
Length = 171
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 85/151 (56%), Gaps = 11/151 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ G MG+GK+ GKI+S L SFFD D L+E+ G S+++IFK +GE FR+ E E
Sbjct: 3 LVFTGFMGTGKSNTGKIISEKLKMSFFDTDDLVEKK-SGFSISDIFKKFGEANFRKMEAE 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++++S +V+S GGGAV P N + +KGI + L E + R+ ++RPLL
Sbjct: 62 TIKEVSEKDSVVISCGGGAVLNPANIANLRKKGIIINLYALAEVIYDRLK--DENNRPLL 119
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANAN 209
+CE + L + L + R YA+ +
Sbjct: 120 -RCE------KPLVEIKKLLDFRKSVYADCD 143
>gi|225016817|ref|ZP_03706009.1| hypothetical protein CLOSTMETH_00729 [Clostridium methylpentosum
DSM 5476]
gi|224950485|gb|EEG31694.1| hypothetical protein CLOSTMETH_00729 [Clostridium methylpentosum
DSM 5476]
Length = 165
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL G MG GK+TVG++ + + F D D IE+ G ++ EIF+ GE FR ETE
Sbjct: 4 IYLCGFMGCGKSTVGRLTAKQMSMKFLDLDEYIEKK-HGCTIPEIFEQRGEQAFRALETE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
L++L+ +++TGGG + P+N Q G V+LD+P + +RIA G +RP++
Sbjct: 63 TLRELAATSGYIIATGGGTMVSPLNAEIARQNGSIVFLDLPFDTCYERIA--GDSNRPVV 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKL 221
Q S E N L+ R A + +A S ++I+ ++
Sbjct: 121 -QSNSRAGLLEIFNYRVPLY--RAHATYSVDASHSPKSISEQI 160
>gi|431929547|ref|YP_007242593.1| shikimate kinase [Thioflavicoccus mobilis 8321]
gi|431827850|gb|AGA88963.1| shikimate kinase [Thioflavicoccus mobilis 8321]
Length = 174
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 85/148 (57%), Gaps = 13/148 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVG MG+GK+T+G+ L+ VL Y F D D I++ G + IF+ GE FR++E +
Sbjct: 7 IFLVGPMGAGKSTIGRQLAEVLSYEFKDSDQEIQRRT-GVDIPTIFEFEGEAGFRDRERQ 65
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTD-SRPL 177
+L++L ++V++TGGGAV RP N + + +G+ V+L E Q+ A D SRPL
Sbjct: 66 ILEELIQGERIVLATGGGAVLRPENRQDLTARGVVVYLHCSPE---QQYARTARDRSRPL 122
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAY 205
L ++ L RL L ER Y
Sbjct: 123 LD-------TSDPLLRLRELMAERDPLY 143
>gi|237809357|ref|YP_002893797.1| shikimate kinase [Tolumonas auensis DSM 9187]
gi|259585304|sp|C4LB08.1|AROK_TOLAT RecName: Full=Shikimate kinase; Short=SK
gi|237501618|gb|ACQ94211.1| Shikimate kinase [Tolumonas auensis DSM 9187]
Length = 172
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 9/140 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+L+G MG+GK+T+GK LS L +D D IE+ G +A +F + GE FR++E
Sbjct: 5 RNIFLIGPMGAGKSTIGKYLSETLHMDLYDSDQEIERRT-GADIAWVFDVEGEEGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAAVGTDS-R 175
+V+ LS ++ +V++TGGGA+ P+ R +GI V+L+ P+E +++A D R
Sbjct: 64 EQVISDLSELQGIVLATGGGAIKSPLTRNRLSARGIVVYLETPIE---KQLARTQRDKRR 120
Query: 176 PLLHQCESGDAYTEALNRLS 195
PLL E E L RL+
Sbjct: 121 PLLRTEEPP---REVLTRLA 137
>gi|297582961|ref|YP_003698741.1| shikimate kinase [Bacillus selenitireducens MLS10]
gi|297141418|gb|ADH98175.1| Shikimate kinase [Bacillus selenitireducens MLS10]
Length = 170
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 10/161 (6%)
Query: 59 CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKET 118
I L+G MG GKTTVG++L+ G F D D I ++ G + EIF+ YGE FR+KE
Sbjct: 6 TIVLIGFMGVGKTTVGEVLARKTGRPFTDTDDAIVEAFGGMPIPEIFRTYGEPAFRKKER 65
Query: 119 EVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPL 177
EV+ L ++ V+S GGGA + I +QK V+LD+ E +R+ + DSRPL
Sbjct: 66 EVITSLVEEKEGVLSLGGGAFKQESIRDLCLQKATVVYLDMTFERWKERLGDL-VDSRPL 124
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
L +++ + + + ER Y + + ++++
Sbjct: 125 LQ--------GKSMEEIESFFYERRSLYQDHHIHTKTDDLS 157
>gi|398835888|ref|ZP_10593241.1| 3-dehydroquinate synthase [Herbaspirillum sp. YR522]
gi|398214643|gb|EJN01218.1| 3-dehydroquinate synthase [Herbaspirillum sp. YR522]
Length = 568
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 82/144 (56%), Gaps = 6/144 (4%)
Query: 59 CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKET 118
I+LVG+MGSGKTT+G+ L+ L F D D IE G S+ IF++ GE FR +E
Sbjct: 4 SIFLVGLMGSGKTTIGRALAKKLNKRFIDSDHEIEART-GASIPVIFEIEGEESFRRREA 62
Query: 119 EVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTD-SRP 176
EV+++LS +V++TGGGA+ P + +++KG +V +L + + QR G D +RP
Sbjct: 63 EVIRELSAQPDIVLATGGGAILHPDSRAHLKKGGTVIYLRASINQILQR---TGRDKNRP 119
Query: 177 LLHQCESGDAYTEALNRLSTLWEE 200
LL + E + L+ E
Sbjct: 120 LLQTADPRRKLEELSRQREPLYRE 143
>gi|445494483|ref|ZP_21461527.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Janthinobacterium sp. HH01]
gi|444790644|gb|ELX12191.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Janthinobacterium sp. HH01]
Length = 547
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 78/124 (62%), Gaps = 4/124 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++LVG+MG+GKTT+G+IL+ LG F D D IE G S+ IF++ GE FR +E +
Sbjct: 4 VFLVGLMGAGKTTIGRILARKLGSRFIDSDHEIEART-GASIPWIFEIEGEQSFRRREAD 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+++L+ + LV++TGGGA+ + Y+Q +G ++L + ++ QR A +RPLL
Sbjct: 63 VIRELTSQQDLVLATGGGAILNADSRAYLQSRGTVIYLRATVNSILQRTAH--DKNRPLL 120
Query: 179 HQCE 182
+
Sbjct: 121 QTAD 124
>gi|88861009|ref|ZP_01135644.1| shikimate kinase I [Pseudoalteromonas tunicata D2]
gi|88816937|gb|EAR26757.1| shikimate kinase I [Pseudoalteromonas tunicata D2]
Length = 172
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 87/150 (58%), Gaps = 12/150 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L FFD D IE+ G +A +F + GE FR +E
Sbjct: 5 RNIFLVGPMGAGKSTIGRHLADQLHLEFFDSDQEIERRT-GADIAWVFDIEGEEGFRRRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SR 175
V+ L+ M+ +V++TGGG+V ++ + + +GI V+L+ P+E +++A D R
Sbjct: 64 ETVISDLTEMQGIVLATGGGSVLSKDVRNKLSARGIVVYLETPIE---KQVARTQRDKKR 120
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAY 205
PLL E E L RLS EER Y
Sbjct: 121 PLLQTEEDP---KEVLERLS---EERVPLY 144
>gi|389696013|ref|ZP_10183655.1| shikimate kinase [Microvirga sp. WSM3557]
gi|388584819|gb|EIM25114.1| shikimate kinase [Microvirga sp. WSM3557]
Length = 216
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 88/176 (50%), Gaps = 14/176 (7%)
Query: 38 IDEAQVLKNKSQEIEP---YLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQ 94
+DE SQ P L R I LVG+MG+GK+TVG+ L+ L F D D IE
Sbjct: 16 LDEVGGQNQASQRGHPVSRLLGTRSIVLVGLMGAGKSTVGRRLAQALKLPFRDADHEIEA 75
Query: 95 SVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGIS 153
+ G ++ EIF ++GE FR+ E V+ +L +V++TGGGA + R + GIS
Sbjct: 76 AA-GMTIPEIFAIHGEEHFRDGERRVIARLLQDGPIVLATGGGAFMNEETRRRIAEHGIS 134
Query: 154 VWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
+WL L+ L +R+ T RPLL + + L E R YA A+
Sbjct: 135 LWLKADLDILMRRVRKRAT--RPLLQNPDPEGT-------MRRLMELRYPVYATAD 181
>gi|399886931|ref|ZP_10772808.1| shikimate kinase [Clostridium arbusti SL206]
Length = 170
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 88/150 (58%), Gaps = 15/150 (10%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I +GM GSGKTT+ K ++ + G +D D IE+ +G ++ +IFK GE +FR+ E
Sbjct: 5 KNIVFIGMPGSGKTTIAKNIAKIHGLKLYDTDEYIEKK-EGKTITDIFK-QGESYFRKLE 62
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
T+V++++S + +V+STGGG + N +Y+++ GI ++++ P+E + I V T +RP
Sbjct: 63 TQVVKEISSEKSVVISTGGGVIKSLDNMKYLKENGIVLFINRPIEDI---IKDVDTVNRP 119
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYA 206
LL + L L++ER Y
Sbjct: 120 LLKGTKE---------HLYKLYDERFHLYK 140
>gi|121999037|ref|YP_001003824.1| shikimate kinase [Halorhodospira halophila SL1]
gi|254806775|sp|A1WZB0.1|AROK_HALHL RecName: Full=Shikimate kinase; Short=SK
gi|121590442|gb|ABM63022.1| shikimate kinase [Halorhodospira halophila SL1]
Length = 177
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVG MG+GK+TVG+ L+ +LG F D D IE G S+ IF + GE FR +E
Sbjct: 10 IFLVGPMGAGKSTVGRELANLLGLEFIDSDAAIEART-GVSIPWIFDIEGEAGFRAREAA 68
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ +L+ +VV+TGGGAVT P N + +G+ V+L P+ QR +RPLL
Sbjct: 69 VIDELTGRDGVVVATGGGAVTTPANRDLLGARGVVVYLYTPVSVQLQRTRH--DTNRPLL 126
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
Q + +A RL +L ER Y
Sbjct: 127 -QSDDPEA------RLQSLLAERDPLY 146
>gi|420238806|ref|ZP_14743181.1| shikimate kinase [Rhizobium sp. CF080]
gi|398084652|gb|EJL75328.1| shikimate kinase [Rhizobium sp. CF080]
Length = 202
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 91/181 (50%), Gaps = 18/181 (9%)
Query: 48 SQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKL 107
S++ L R + VG+MG+GK+ +G++++ L F D D IE+ V S++E+F
Sbjct: 13 SEKARAVLGKRNLIFVGLMGAGKSAIGRLVAQTLSIPFIDTDAEIEK-VSRMSISELFAA 71
Query: 108 YGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK--GISVWLDVPLEALAQ 165
YGE FR ET V+++L VVSTGGGA N R+ K GIS+WL L+ L +
Sbjct: 72 YGETEFRALETRVIERLLRGGPRVVSTGGGAFINE-NTRHQIKIGGISIWLKADLDVLWE 130
Query: 166 RIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKD 225
R+ D RPLL L L +R YA A+ V +N+ KD
Sbjct: 131 RVNK--RDHRPLLKTENPKQT-------LENLMTQRYPIYAEADLTVQSQNV-----RKD 176
Query: 226 V 226
V
Sbjct: 177 V 177
>gi|311030873|ref|ZP_07708963.1| shikimate kinase [Bacillus sp. m3-13]
Length = 171
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 77/124 (62%), Gaps = 5/124 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ IYL G MG+GKTT+G+ L+ L D DTLIEQ++ + +IF+ YGE FFRE E
Sbjct: 2 KSIYLTGFMGAGKTTIGQALATNLSLDVVDTDTLIEQNL-KLQIKDIFEQYGESFFRELE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
T+ LQ+L + ++V+TGGG VT N +M++ G ++L E + +R+ T RP
Sbjct: 61 TKTLQELPV-NDILVTTGGGIVTTQNNIDWMKENGCMIFLYADPEVIWERLENDTT--RP 117
Query: 177 LLHQ 180
L+ Q
Sbjct: 118 LIKQ 121
>gi|392395773|ref|YP_006432374.1| shikimate kinase [Flexibacter litoralis DSM 6794]
gi|390526851|gb|AFM02581.1| shikimate kinase [Flexibacter litoralis DSM 6794]
Length = 171
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL+GM SGK+T GK+++ L Y+F D DTLIE+ + +++ +IF GE FFR+ E
Sbjct: 3 IYLIGMPASGKSTFGKLVAQKLNYTFLDLDTLIEED-NNSTIPKIFDTKGEDFFRKLEQN 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAV---GTDSR 175
LQ + + +++TGGG N M++ GI ++ + ++ L +R +SR
Sbjct: 62 ALQFTFNLDKTIIATGGGTPCFFDNLDKMKENGIVCFIHIEIKTLVKRTFQAQQRKQNSR 121
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
PL S + E +S W +R E Y A+ +
Sbjct: 122 PLFKDSTS---FEELYQLVSQKWTDRKEFYQKADFEIK 156
>gi|398376986|ref|ZP_10535165.1| shikimate kinase [Rhizobium sp. AP16]
gi|397727187|gb|EJK87614.1| shikimate kinase [Rhizobium sp. AP16]
Length = 221
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 100/182 (54%), Gaps = 19/182 (10%)
Query: 34 VHAPIDE-----AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDC 88
V+ P+ E A+ L+++++ L R + VG+MG+GK+++G++++ LG F D
Sbjct: 22 VNGPMSEQVLTLAESLRDRAR---AALGTRNLVFVGLMGAGKSSIGRVVANQLGIPFVDT 78
Query: 89 DTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM 148
D IE+ V ++ E+F YGE FR E V+++L VVSTGGGA R++
Sbjct: 79 DIEIER-VSRMTIPELFAAYGEEEFRALEMRVIKRLLKGGPRVVSTGGGAFINERTRRHV 137
Query: 149 QK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYAN 207
++ G+SVWL L+ L +R++ D+RPLL + + L RL T R YA
Sbjct: 138 KRSGLSVWLKADLDVLWERVSK--RDTRPLLKT----ENPKQTLERLMT---ARYPIYAE 188
Query: 208 AN 209
A+
Sbjct: 189 AD 190
>gi|28211258|ref|NP_782202.1| shikimate kinase [Clostridium tetani E88]
gi|28203698|gb|AAO36139.1| shikimate kinase [Clostridium tetani E88]
Length = 167
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 18/165 (10%)
Query: 65 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 124
M G+GK+T GK LS ++ Y F D D IE+ ++ +++ IFK GE +FR+ E ++L +
Sbjct: 1 MPGAGKSTFGKELSKIIQYDFIDTDYEIEK-IERSAIKHIFKEKGENYFRKLERDLLNDI 59
Query: 125 SLMRQLVVSTGGGAVTRPINWRYM----QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
+ VV+TGGG PI + M + GI+++LDVPLE L +R D+RPLL +
Sbjct: 60 IKFDKKVVATGGGL---PIFFNNMDILNKNGITIFLDVPLEELLKRNEK--NDNRPLLDK 114
Query: 181 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENI-AVKLGHK 224
D +L ++ R Y +V NI A +L +K
Sbjct: 115 ENKYD-------KLKEIYNSRIHIYNKCKIKVENYNISAYELSYK 152
>gi|402303616|ref|ZP_10822707.1| shikimate kinase [Selenomonas sp. FOBRC9]
gi|400378231|gb|EJP31092.1| shikimate kinase [Selenomonas sp. FOBRC9]
Length = 173
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 97/185 (52%), Gaps = 20/185 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MG+GKT+VG++L+ LG +F D D IE++ G ++ E+F +GE +FR +E E
Sbjct: 4 IVLIGFMGTGKTSVGRLLAARLGCAFHDLDKKIEEA-HGMTIPEMFVRHGEPYFRAREKE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+ + LVV+TGGG V N R ++K GI V L ++ + R AA G RP+L
Sbjct: 63 AVAAAAARGNLVVATGGGVVKDTENMRALRKNGIIVALTADVDTILARTAARG--ERPVL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
+ + GD ++ L EER YA A+ V D + P+ IA
Sbjct: 121 DRADVGDRRAA----VAALMEERRLLYAGADVTV------------DTTGRAPLEIAEHI 164
Query: 239 LEQIE 243
++ I
Sbjct: 165 MQTIR 169
>gi|288573792|ref|ZP_06392149.1| 3-dehydroquinate synthase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288569533|gb|EFC91090.1| 3-dehydroquinate synthase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 520
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 87/164 (53%), Gaps = 14/164 (8%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
G ++L G MGSGKT+VG+ L+ +G F D D IE G SVAEIF GE FR
Sbjct: 4 GELVFLGGFMGSGKTSVGQRLAEAVGLPFVDLDKAIELRA-GASVAEIFASQGEEGFRRL 62
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSR 175
E + L+++S + + +V+ GGGA+ P + +KG V LD + + R+AA R
Sbjct: 63 EAQSLREISDLERCIVALGGGALKDPKGRELIRKKGRLVILDASADTVKNRVAAQ-PGQR 121
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 219
PLL + L LWE+R Y++ + RV +++ V
Sbjct: 122 PLLK-----------MENLEDLWEKRRPLYSDGDLRVETDHLNV 154
>gi|406706818|ref|YP_006757171.1| shikimate kinase [alpha proteobacterium HIMB5]
gi|406652594|gb|AFS47994.1| Shikimate kinase [alpha proteobacterium HIMB5]
Length = 170
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 91/169 (53%), Gaps = 22/169 (13%)
Query: 56 SGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR- 114
S + I +GMMGSGKTTVGK++S L FFD D IE S+ +IF+ GE FFR
Sbjct: 3 SFKNIVFLGMMGSGKTTVGKMISKRLNIDFFDVDQEIENKTK-QSIKDIFEKKGEIFFRK 61
Query: 115 --EKETEVLQKLSLMR--QLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAA 169
EKET L+++R Q V+S GGGA + R I ++ +SVWL L +RI
Sbjct: 62 LEEKET-----LAILRKNQGVISLGGGAFLNRNIQKEVLENHLSVWLKWDDITLIKRIK- 115
Query: 170 VGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
+ RP++ + + L L +ER + Y+ ++ ++ +N++
Sbjct: 116 -NSKKRPVVTKLNKDE--------LKKLIKERSQTYSKSHLKIKCDNLS 155
>gi|304316743|ref|YP_003851888.1| shikimate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302778245|gb|ADL68804.1| Shikimate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 171
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 11/161 (6%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L G M +GK+ VGK ++ +L + + D D LIE+ + G + EIF YGE +FR E
Sbjct: 4 IALTGFMATGKSVVGKKVADILSFGYIDTDCLIEK-ICGMKIPEIFDKYGEKYFRGIEKV 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+++ S ++ V+STGGG V P N ++K G+ + L E + + + G SRP+L
Sbjct: 63 AVKRASRLKNHVISTGGGVVLNPSNIVQLRKHGVVICLKARPEIILRNVGDAG--SRPIL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 219
S D Y R+ TL +ER Y A+ + + + +
Sbjct: 121 M---SDDVY----ERIKTLLDERQHFYEFADYTIDISEMGI 154
>gi|406038458|ref|ZP_11045813.1| shikimate kinase [Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 163
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
Query: 66 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 125
MG+GKTTVG+ L+ +LG F D D IE+ G S+ IF+ GE FR +E V+ +L+
Sbjct: 1 MGAGKTTVGRHLAELLGREFLDSDHEIERKT-GASIPWIFEKEGEIGFRSREKTVINELT 59
Query: 126 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
RQLVV+TGGGAVT+ N Y++ +GI ++L P+E QR +RPLL
Sbjct: 60 QRRQLVVATGGGAVTQAENRAYLKNRGIVIYLYTPVELQLQR--TYRDKNRPLL 111
>gi|349608742|ref|ZP_08888165.1| shikimate kinase [Neisseria sp. GT4A_CT1]
gi|348611599|gb|EGY61243.1| shikimate kinase [Neisseria sp. GT4A_CT1]
Length = 173
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 11/150 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G+MG+GKTT+G+ ++ +L F+D D I + G S+ IF++ GE FR +ET
Sbjct: 11 LILIGLMGAGKTTLGRYIAQMLDRPFYDSDHEI-CTTSGVSIPIIFEMEGEQGFRNRETA 69
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+KL+ M+ +++STGGG+V R N + M++ G V+L E L +R + RPLL
Sbjct: 70 MLKKLTAMKDIILSTGGGSVLREENRQNMRRNGTVVYLHASPEVLLERTRY--DNGRPLL 127
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANA 208
Q E+ L +L L+ R Y N
Sbjct: 128 -QVEN------PLAKLQELYNARDPLYRNT 150
>gi|421466415|ref|ZP_15915094.1| shikimate kinase [Acinetobacter radioresistens WC-A-157]
gi|400203195|gb|EJO34188.1| shikimate kinase [Acinetobacter radioresistens WC-A-157]
Length = 166
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
Query: 66 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 125
MG+GKTTVG+ L+ +LG F D D +E+ G ++ IF+ GE FR +ET V+ +L+
Sbjct: 1 MGAGKTTVGRHLAELLGREFLDSDHELERKT-GANIPWIFEKEGEAGFRSRETAVIDQLT 59
Query: 126 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
L ++LV++TGGGAVT+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 60 LRQKLVLATGGGAVTQVPNREFLKQRGIVVYLYTPVEIQLQR--TYRDKNRPLLQ 112
>gi|121534449|ref|ZP_01666272.1| Shikimate kinase [Thermosinus carboxydivorans Nor1]
gi|121306942|gb|EAX47861.1| Shikimate kinase [Thermosinus carboxydivorans Nor1]
Length = 184
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 11/145 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MG+GKT G++L+ L F D D IE G +++EIF YGE +FR++E
Sbjct: 4 IVLIGFMGTGKTCTGRLLAQRLRRVFVDIDKKIELE-QGMTISEIFHTYGEAYFRQRERA 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWL----DVPLEALAQRIAAVGTDS 174
+ K++ V++TGGGAV P N + Q+G+ +WL DV E ++R S
Sbjct: 63 TIAKVARYTNTVIATGGGAVLNPDNIICLKQQGVVIWLTASPDVIFERTSRR-----RGS 117
Query: 175 RPLLHQCESGDAYTEALNRLSTLWE 199
RPLL + DA E L L++
Sbjct: 118 RPLLDRPNPRDAIAELLAERRRLYQ 142
>gi|393725171|ref|ZP_10345098.1| shikimate kinase [Sphingomonas sp. PAMC 26605]
Length = 159
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 66 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 125
MG+GK+TVG+ L+ LG F D D+ IE + G +V+EIF+ +GE +FR+ E V+ +L
Sbjct: 1 MGAGKSTVGRRLATRLGLPFVDADSEIEIAA-GMAVSEIFERFGEAYFRDGERRVIARLM 59
Query: 126 LMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 184
+ V++TGGGA P + G ++WLD L +R++ D+RPLL
Sbjct: 60 DGERRVIATGGGAFVDPQTRAAILSNGFAIWLDANPAVLVERVSR--RDTRPLLRN---- 113
Query: 185 DAYTEALNRLSTLWEERGEAYANANARVS 213
+ L L L R YA A+ RVS
Sbjct: 114 ---RDPLAVLEELARVRNPFYATAHLRVS 139
>gi|336317360|ref|ZP_08572216.1| shikimate kinase [Rheinheimera sp. A13L]
gi|335878293|gb|EGM76236.1| shikimate kinase [Rheinheimera sp. A13L]
Length = 172
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 88/148 (59%), Gaps = 11/148 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ +L F+D D IE+ G +A +F L GE FR +E
Sbjct: 5 RNIFLVGPMGAGKSTIGRHLADMLHLEFYDSDQEIERRT-GADIAWVFDLEGEEGFRVRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRP 176
V+ L+ ++ +V++TGGG+V ++ R +GI V+L+ P+E +++A D R
Sbjct: 64 ENVISDLTELQGIVLATGGGSVLSKETRNRLSARGIVVYLETPIE---KQVARTQRDKRR 120
Query: 177 LLHQCESGDAYTEALNRLST----LWEE 200
L Q E +A E L RL+ L+EE
Sbjct: 121 PLLQTE--EAPKEVLERLAAERNPLYEE 146
>gi|114705352|ref|ZP_01438260.1| shikimate kinase [Fulvimarina pelagi HTCC2506]
gi|114540137|gb|EAU43257.1| shikimate kinase [Fulvimarina pelagi HTCC2506]
Length = 193
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 11/161 (6%)
Query: 50 EIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYG 109
++ L R + LVG+MG+GKTTVG+ L+ +LG F D D IEQ V S+ E+F+ YG
Sbjct: 12 DVREKLQDRSVALVGLMGAGKTTVGRRLAALLGLPFSDSDQEIEQ-VSRMSIPELFEAYG 70
Query: 110 EGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIA 168
E FR E V+ +L V+ TGGGA P +++ +++WL L+ L R+
Sbjct: 71 EPEFRALEARVVSRLVQEGPRVLGTGGGAYLNPETRSHLKDHAVTLWLKADLDTLMARV- 129
Query: 169 AVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
+ ++RPLL ++GD +S L ER Y +A+
Sbjct: 130 -MKRNNRPLL---KTGDPR----KIMSKLMGERYPVYGSAD 162
>gi|126699447|ref|YP_001088344.1| Shikimate kinase (SK) [Clostridium difficile 630]
gi|254975474|ref|ZP_05271946.1| shikimate kinase [Clostridium difficile QCD-66c26]
gi|255092862|ref|ZP_05322340.1| shikimate kinase [Clostridium difficile CIP 107932]
gi|255101011|ref|ZP_05329988.1| shikimate kinase [Clostridium difficile QCD-63q42]
gi|255306865|ref|ZP_05351036.1| shikimate kinase [Clostridium difficile ATCC 43255]
gi|255314604|ref|ZP_05356187.1| shikimate kinase [Clostridium difficile QCD-76w55]
gi|255517278|ref|ZP_05384954.1| shikimate kinase [Clostridium difficile QCD-97b34]
gi|255650384|ref|ZP_05397286.1| shikimate kinase [Clostridium difficile QCD-37x79]
gi|260683498|ref|YP_003214783.1| shikimate kinase [Clostridium difficile CD196]
gi|260687094|ref|YP_003218227.1| shikimate kinase [Clostridium difficile R20291]
gi|306520340|ref|ZP_07406687.1| shikimate kinase [Clostridium difficile QCD-32g58]
gi|384361116|ref|YP_006198968.1| shikimate kinase [Clostridium difficile BI1]
gi|423091448|ref|ZP_17079569.1| shikimate kinase [Clostridium difficile 70-100-2010]
gi|115250884|emb|CAJ68709.1| Shikimate kinase (SK) [Clostridium difficile 630]
gi|260209661|emb|CBA63365.1| shikimate kinase [Clostridium difficile CD196]
gi|260213110|emb|CBE04513.1| shikimate kinase [Clostridium difficile R20291]
gi|357554930|gb|EHJ36623.1| shikimate kinase [Clostridium difficile 70-100-2010]
Length = 177
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 83/145 (57%), Gaps = 15/145 (10%)
Query: 62 LVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL 121
L+GM GSGKTT+GK+L+ SF D D I Q + S+AE+F GE FR ET+
Sbjct: 11 LIGMPGSGKTTIGKLLAKEYNCSFCDMDDYIIQ-ISQKSIAELFS-EGEDIFRNYETQAC 68
Query: 122 QKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
++LS+ + V+STGGG + + +N +++ GI +++D P++ + + I +SRPLL
Sbjct: 69 RELSISDKTVISTGGGVIKKDVNMEILKETGIIIFIDRPIQKILEDI---NINSRPLLKN 125
Query: 181 CESGDAYTEALNRLSTLWEERGEAY 205
+ +RL L+ ER Y
Sbjct: 126 GK---------DRLYNLYNERINLY 141
>gi|206901339|ref|YP_002251167.1| shikimate kinase [Dictyoglomus thermophilum H-6-12]
gi|206740442|gb|ACI19500.1| shikimate kinase [Dictyoglomus thermophilum H-6-12]
Length = 173
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 92/184 (50%), Gaps = 24/184 (13%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I +VG MGSGKTT+G +L+ L Y F+D D IE+ +G S+ +IF YGE FR E+
Sbjct: 6 ISVVGFMGSGKTTIGLLLANFLNYFFYDLDEYIEKK-EGKSIKDIFADYGEEHFRNLESF 64
Query: 120 VLQKL-SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAV-GTDSRP 176
L++L ++V+STGGG + R IN + + +K V+LD E R+ D RP
Sbjct: 65 YLKELIEKHNKIVISTGGGIIKREINRKLLKEKTFVVFLDGSFEVFMNRLEGTEEKDKRP 124
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAI 236
L+ + + L LW R Y E +K+ +V S TP I
Sbjct: 125 LMSLGK---------DELYNLWISRKPLYE--------EVATLKI---NVDSKTPYQIVR 164
Query: 237 EALE 240
E L+
Sbjct: 165 EILD 168
>gi|443244322|ref|YP_007377547.1| shikimate kinase [Nonlabens dokdonensis DSW-6]
gi|442801721|gb|AGC77526.1| shikimate kinase [Nonlabens dokdonensis DSW-6]
Length = 176
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 96/159 (60%), Gaps = 9/159 (5%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MGSGK+TVG++LS + +SFFD D IEQ ++ SV +IF G +FR+ E +
Sbjct: 5 IVLLGYMGSGKSTVGELLSSQISFSFFDLDHEIEQ-LEKKSVTKIFDENGVIYFRKIENK 63
Query: 120 VLQK-LSLMRQLVVSTGGGA--VTRPINWRYMQKGI-SVWLDVPLEALAQRIAAVGTDSR 175
VL K ++ LV+S GGG +N+ ++ I +++LDVP+ L QR+ A + +R
Sbjct: 64 VLDKIINSENDLVLSLGGGTPCYYDTMNYLNSKENIKTIYLDVPIPVLVQRLFAERS-TR 122
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 214
PL+ + ++ + TE + + L+E R E Y A +S+
Sbjct: 123 PLIEKIDTQEELTEFIGK--HLFERR-EFYRQAKMIISV 158
>gi|254468282|ref|ZP_05081688.1| shikimate kinase [beta proteobacterium KB13]
gi|207087092|gb|EDZ64375.1| shikimate kinase [beta proteobacterium KB13]
Length = 171
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I LVGMMG+GKTT+GK+LS L Y F D D IE+ G + IF++ GE FRE+E +
Sbjct: 5 IILVGMMGAGKTTIGKLLSNKLDYDFIDLDKTIEEK-SGVKINTIFEIEGESGFRERELQ 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK--GISVWLDVPLEALAQRIAAVGTDSRPL 177
VL L ++++STGGG VT + + K + ++L + L R+ +SRP+
Sbjct: 64 VLNDSILKDKVIISTGGGIVTNEKSRTQLIKHNALIIYLKANHQTLCNRLK--NDNSRPM 121
Query: 178 LH 179
L+
Sbjct: 122 LN 123
>gi|423082582|ref|ZP_17071171.1| shikimate kinase [Clostridium difficile 002-P50-2011]
gi|423087123|ref|ZP_17075513.1| shikimate kinase [Clostridium difficile 050-P50-2011]
gi|357545372|gb|EHJ27347.1| shikimate kinase [Clostridium difficile 050-P50-2011]
gi|357547700|gb|EHJ29575.1| shikimate kinase [Clostridium difficile 002-P50-2011]
Length = 177
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 83/145 (57%), Gaps = 15/145 (10%)
Query: 62 LVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL 121
L+GM GSGKTT+GK+L+ SF D D I Q + S+AE+F GE FR ET+
Sbjct: 11 LIGMPGSGKTTIGKLLAKEYNCSFCDMDDYIIQ-ISQKSIAELFS-EGEDIFRNYETQAC 68
Query: 122 QKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
++LS+ + V+STGGG + + +N +++ GI +++D P++ + + I +SRPLL
Sbjct: 69 RELSISDKTVISTGGGVIKKDVNMEILKETGIIIFIDRPIQKILEDI---NINSRPLLKN 125
Query: 181 CESGDAYTEALNRLSTLWEERGEAY 205
+ +RL L+ ER Y
Sbjct: 126 GK---------DRLYNLYNERINLY 141
>gi|378827235|ref|YP_005189967.1| protein AroK [Sinorhizobium fredii HH103]
gi|365180287|emb|CCE97142.1| aroK [Sinorhizobium fredii HH103]
Length = 195
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 4/126 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + +G+MG+GK+ +G++ + LG F D D IE+ V +V+E+F YGE FR
Sbjct: 20 LGKRNLIFIGLMGAGKSAIGRLTAQALGIPFVDSDHEIER-VSRMTVSELFAAYGEEEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
E VL++L VVSTGGGA + R ++K G++VWL+ +E L +R+ D
Sbjct: 79 ALEARVLKRLLRSGPRVVSTGGGAYINERSRRQIKKGGLTVWLNADIEVLWERVNK--RD 136
Query: 174 SRPLLH 179
SRPLL
Sbjct: 137 SRPLLK 142
>gi|440784955|ref|ZP_20961992.1| shikimate kinase [Clostridium pasteurianum DSM 525]
gi|440218605|gb|ELP57824.1| shikimate kinase [Clostridium pasteurianum DSM 525]
Length = 170
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 86/149 (57%), Gaps = 15/149 (10%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I +GM GSGKTT+ K +S G +D D IE+ +G +++IFK GE +FR+ E
Sbjct: 5 KNIVFIGMPGSGKTTIAKNISKRYGLQLYDTDEYIEKK-EGKIISDIFK-NGEEYFRKLE 62
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
TE ++++S +V+STGGG + N + +++ GI V+++ PLE + I V +RP
Sbjct: 63 TEAIKEISSKEAVVISTGGGVIKSSYNMKLLKRNGIIVFINRPLEYI---IKDVDISNRP 119
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAY 205
LL Q + + L L++ER + Y
Sbjct: 120 LLSQ---------SRDNLHKLYKERYKLY 139
>gi|257063396|ref|YP_003143068.1| shikimate kinase [Slackia heliotrinireducens DSM 20476]
gi|256791049|gb|ACV21719.1| shikimate kinase [Slackia heliotrinireducens DSM 20476]
Length = 188
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 10/157 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ ++L+G MG+GKT+V + L+ VLG + D D +E D +A+IF GE +FR+ E
Sbjct: 16 KPVFLIGFMGAGKTSVAQYLANVLGLASIDADEYLELMEDRV-IADIFAEDGEDYFRDIE 74
Query: 118 TEVLQKLSLMRQLV--VSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDS 174
T L++L+ R+LV ++TGGG + RP N M G +V+L V + A+RI T+S
Sbjct: 75 TRHLEELA-KRKLVRLIATGGGVIKRPANIEIMHSYGYTVYLGVTADEAAERIP--NTES 131
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANAR 211
RPL + A L R+ L+E +AY R
Sbjct: 132 RPLFKNIDV--ARKTVLERMP-LYEAAADAYVETTGR 165
>gi|424912398|ref|ZP_18335775.1| shikimate kinase [Rhizobium leguminosarum bv. viciae USDA 2370]
gi|392848429|gb|EJB00952.1| shikimate kinase [Rhizobium leguminosarum bv. viciae USDA 2370]
Length = 193
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 17/188 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I VG+MG+GK+ +G++++ L F D D IE+ V +++E+F YGE FR
Sbjct: 20 LGRRNIVFVGLMGAGKSAIGRMVAQQLRVPFIDTDVEIER-VSRMTISELFATYGEEEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
ET V+++L V+STGGGA R++ + GIS+WL LE L +R+ D
Sbjct: 79 ALETRVIKRLLRGGPKVISTGGGAFINDNTRRHISRGGISLWLKADLEVLWERVNK--RD 136
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
RPLL + E+ A L+ L E+R Y+ A+ + ++ K++ +T V
Sbjct: 137 HRPLL-KTENPRAT------LAALMEKRYPIYSEADLTIESRDV-----RKEI-IVTEVL 183
Query: 234 IAIEALEQ 241
AI +EQ
Sbjct: 184 AAIAGIEQ 191
>gi|306843456|ref|ZP_07476057.1| shikimate kinase [Brucella inopinata BO1]
gi|306276147|gb|EFM57847.1| shikimate kinase [Brucella inopinata BO1]
Length = 200
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L+ +++ I L + + LVG+MG+GK+T+G+ ++ +L F D DT IE +V +VAE
Sbjct: 10 LQRQTETIRQLLGSKVVVLVGLMGAGKSTIGRKVANMLNLPFKDADTEIE-TVSRMTVAE 68
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEA 162
+F+ YGE FR+ E V+ +L +V++TGGGA + + GIS+W++ L+
Sbjct: 69 LFEAYGEVEFRDLERRVILRLLDDGPMVLATGGGAYMNAETRAAIAEAGISIWINADLDV 128
Query: 163 LAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
L +R++ +RPLL + + L +ER YA A
Sbjct: 129 LMERVSR--RQNRPLLKNSDPRGV-------MQRLMDERYPVYALA 165
>gi|227823253|ref|YP_002827225.1| shikimate kinase [Sinorhizobium fredii NGR234]
gi|227342254|gb|ACP26472.1| shikimate kinase [Sinorhizobium fredii NGR234]
Length = 195
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 4/126 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + +G+MG+GK+ +G++ + LG F D D IE+ V +V+E+F YGE FR
Sbjct: 20 LGKRNLIFIGLMGAGKSAIGRLTAQALGVPFVDSDHEIER-VSRMTVSELFAAYGEEEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
E VL++L VVSTGGGA + R ++K G++VWL+ LE L +R+ D
Sbjct: 79 ALEARVLKRLLRSGPRVVSTGGGAYINERSRRQIKKGGLTVWLNADLEVLWERVNK--RD 136
Query: 174 SRPLLH 179
+RPLL
Sbjct: 137 TRPLLK 142
>gi|408784842|ref|ZP_11196592.1| shikimate kinase [Rhizobium lupini HPC(L)]
gi|408489181|gb|EKJ97485.1| shikimate kinase [Rhizobium lupini HPC(L)]
Length = 193
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 17/188 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I VG+MG+GK+ +G++++ L F D D IE+ V +++E+F YGE FR
Sbjct: 20 LGRRNIVFVGLMGAGKSAIGRMVAQHLRVPFIDTDVEIER-VSRMTISELFATYGEEEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
ET V+++L V+STGGGA R++ + GIS+WL LE L +R+ D
Sbjct: 79 ALETRVIKRLLRGGPKVISTGGGAFINDNTRRHISRGGISLWLKADLEVLWERVNK--RD 136
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 233
RPLL + E+ A L+ L E+R Y+ A+ + ++ K++ +T V
Sbjct: 137 HRPLL-KTENPRAT------LAALMEKRYPIYSEADLTIESRDV-----RKEI-IVTEVL 183
Query: 234 IAIEALEQ 241
AI +EQ
Sbjct: 184 AAIAGIEQ 191
>gi|90420214|ref|ZP_01228122.1| shikimate kinase, AroK [Aurantimonas manganoxydans SI85-9A1]
gi|90335548|gb|EAS49298.1| shikimate kinase, AroK [Aurantimonas manganoxydans SI85-9A1]
Length = 193
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 101/205 (49%), Gaps = 29/205 (14%)
Query: 51 IEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGE 110
I+ L R + LVG+MG+GKTTVG+ L+ +L F D D IE V S+ E+F+ YGE
Sbjct: 13 IQDRLGTRSVTLVGLMGAGKTTVGRRLAALLDLPFHDTDHEIEL-VSRMSIPELFESYGE 71
Query: 111 GFFREKETEVLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQR 166
FR E V+ +L+ VV+TGGGA TR + Q I+VWL L+ L R
Sbjct: 72 PEFRALEARVVGRLTAEGPQVVATGGGAYMHEETRSL---LKQSAITVWLKADLDTLMDR 128
Query: 167 IAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDV 226
+ +RPLL Q + A+ R L E R YA A+ + N+ +DV
Sbjct: 129 VRRRA--NRPLLKQDDP-----RAVMR--GLIETRYPIYAEADITIPTRNV-----KRDV 174
Query: 227 SSLTPVTIAIEALEQIEGFLKEEDD 251
IA E +E ++ L E D
Sbjct: 175 -------IAQEIIEALDRHLATETD 192
>gi|419845256|ref|ZP_14368534.1| shikimate kinase 1 [Haemophilus parainfluenzae HK2019]
gi|386416179|gb|EIJ30689.1| shikimate kinase 1 [Haemophilus parainfluenzae HK2019]
Length = 180
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 85/145 (58%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMDFVDSDAVIEERA-GADISWIFDLEGEEGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ ++ +V+STGGGAV N Y+ +GI ++L+ ++ QR RP
Sbjct: 64 ERIINELTQLQGVVLSTGGGAVMSKENRNYLSARGIVIYLETSVDKQYQRTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL ++ E L ++ + L+EE
Sbjct: 122 LLQGTDNPRQVLEDLAKVRNPLYEE 146
>gi|334344968|ref|YP_004553520.1| shikimate kinase [Sphingobium chlorophenolicum L-1]
gi|334101590|gb|AEG49014.1| Shikimate kinase [Sphingobium chlorophenolicum L-1]
Length = 182
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
++ S+ + + I LVGMMG GK+TVG+ L+ LG F D D IE++ G +++E
Sbjct: 1 MQRNSKSADAHAKRGPIVLVGMMGVGKSTVGRRLAARLGVGFVDADEEIEKAA-GMTISE 59
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVP 159
+F+ YGE +FR+ E V+ +L V++TGGGA TR + ++ +++WLD
Sbjct: 60 MFERYGEAYFRDGERRVIARLMDGEPQVIATGGGAFMQEETRAL---ILEHALAIWLDAD 116
Query: 160 LEALAQRIAAVGTDSRPLL 178
++ L R++ + RPLL
Sbjct: 117 IDTLVDRVSR--REGRPLL 133
>gi|330813130|ref|YP_004357369.1| 3-dehydroquinate synthase [Candidatus Pelagibacter sp. IMCC9063]
gi|327486225|gb|AEA80630.1| 3-dehydroquinate synthase [Candidatus Pelagibacter sp. IMCC9063]
Length = 538
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 91/160 (56%), Gaps = 10/160 (6%)
Query: 62 LVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL 121
L GMMGSGK+++GK LS +L F+D D IE+ ++ T + +IFK GE +FR+ E ++
Sbjct: 7 LTGMMGSGKSSIGKELSNILSLKFYDTDLEIEKMLNMT-IPDIFKNKGENYFRKIEEKIC 65
Query: 122 QKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
L + V++ GGGA + + I ++K ISVW+DV + + +R+ + + RP+L
Sbjct: 66 IDLINGDEKVIALGGGAFLNKKIREIVLKKSISVWIDVDISTIVKRM-KISKNIRPMLD- 123
Query: 181 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 220
Y + ++++ +R Y AN ++ +I+ K
Sbjct: 124 ------YKDLKGSITSILAKRSPIYQLANIKIKATSISKK 157
>gi|268609153|ref|ZP_06142880.1| shikimate kinase [Ruminococcus flavefaciens FD-1]
Length = 165
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 15/168 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L G MG GKTT GK+ + LG F D D LI +++ G S+ +IF+ GE FFR+ E E
Sbjct: 3 IFLCGFMGCGKTTAGKLAAKKLGSGFTDTDDLIVRTL-GMSIPDIFEKKGEPFFRQTEAE 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGIS--VWLDVPLEALAQRIAAVGTDSRPL 177
+++ L + +V + GGGA+ P + ++ + V+LDVP E +RI+ G +RP+
Sbjct: 62 IVKSLC-GKTIVAACGGGAMLNPDTAKAAREAGAEIVFLDVPFETCYERIS--GDTNRPI 118
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAY-ANANARVSLENIAVKLGHK 224
+ + L L+++R E Y +++ RV + V+ K
Sbjct: 119 VMR--------STKEELKALYDQRREVYLSHSTVRVECDGSPVENAEK 158
>gi|237749548|ref|ZP_04580028.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacter formigenes OXCC13]
gi|229380910|gb|EEO31001.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacter formigenes OXCC13]
Length = 553
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 80/133 (60%), Gaps = 5/133 (3%)
Query: 62 LVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL 121
+VG+MGSGKTTVG++L+ LG F D D IE G +V+ IF++ GE FR +E E +
Sbjct: 1 MVGLMGSGKTTVGRLLAKKLGMRFVDSDHEIEART-GATVSWIFEIEGEDSFRRREVETI 59
Query: 122 QKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
L+ + +V++TGGGAV P N + ++ +G ++L + + QR + SRPLL Q
Sbjct: 60 DDLTSQKGVVLATGGGAVVHPENRKNLKARGTVIYLRATVNNILQR--TMHDKSRPLL-Q 116
Query: 181 CESGDAYTEALNR 193
E+ E L+R
Sbjct: 117 TENRRQKIEELSR 129
>gi|86747661|ref|YP_484157.1| shikimate kinase [Rhodopseudomonas palustris HaA2]
gi|86570689|gb|ABD05246.1| shikimate kinase [Rhodopseudomonas palustris HaA2]
Length = 205
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 11/173 (6%)
Query: 46 NKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIF 105
+ EI L R + L+GMMG+GK+TVG+ L+ LG F D DT IEQ+ ++ EIF
Sbjct: 14 QQEAEIVAALGERPVVLIGMMGAGKSTVGRRLALRLGLPFLDADTEIEQAA-AMTIPEIF 72
Query: 106 KLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALA 164
+ +GE FR+ E V+ +L +++TGGGA R R K IS+WL+ + +
Sbjct: 73 ETHGEPHFRDGEARVIARLLDGGAKILATGGGAFMREETRARIRDKAISMWLEAEADVIL 132
Query: 165 QRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
+R+ RPLL + ++ L ER Y A+ ++ ++
Sbjct: 133 RRVKRRA--DRPLLQTADPA-------GTIARLIGERYPVYRGADLTIASRDV 176
>gi|253575722|ref|ZP_04853057.1| shikimate kinase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844765|gb|EES72778.1| shikimate kinase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 169
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 85/155 (54%), Gaps = 14/155 (9%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GMMG+GKTTVG +L+ G D D I G S+ +IF GE +FR+ ET
Sbjct: 6 IVLIGMMGTGKTTVGSLLAAETGLKLVDLDQRIAMEA-GRSIPDIFAAEGEAYFRDLETA 64
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRI-AAVGTD-SRPL 177
L++ + +V++TGGGAV R N M+ G L V L+A A I VG D RPL
Sbjct: 65 ALRRTLQEQGIVLATGGGAVLREENRLAMRDG---GLVVALQATADEILVRVGEDPGRPL 121
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
L +G A R++ L EER +AYA A+ V
Sbjct: 122 L----AGGAK----ERITALLEERKDAYAFAHLTV 148
>gi|295703088|ref|YP_003596163.1| shikimate kinase [Bacillus megaterium DSM 319]
gi|294800747|gb|ADF37813.1| shikimate kinase [Bacillus megaterium DSM 319]
Length = 185
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 91/170 (53%), Gaps = 11/170 (6%)
Query: 52 EPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEG 111
E L + I +G MG GKTT+G++++ L F D D IE+ ++IFK +GE
Sbjct: 5 EMSLREKSIVFIGFMGVGKTTIGELVAKKLYRDFIDIDQEIEKMFQ-MPTSQIFKEFGEE 63
Query: 112 FFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAV 170
FFR KE EV+ +LS R ++S GGGA + I + I +LD+ ++ +RI+ +
Sbjct: 64 FFRNKEKEVISQLSQQRLKIISVGGGAFLQEEIQKICLSNCIVFFLDLSWDSWKERISLI 123
Query: 171 GTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 220
DSRP+L +L + L+ R Y+N +++V +N+ ++
Sbjct: 124 -IDSRPVLQ--------GRSLEDIEKLFYTRQAIYSNHHSKVETDNLDIE 164
>gi|345428828|ref|YP_004821944.1| shikimate kinase I [Haemophilus parainfluenzae T3T1]
gi|301154887|emb|CBW14350.1| shikimate kinase I [Haemophilus parainfluenzae T3T1]
Length = 180
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 84/145 (57%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMDFVDSDAVIEERA-GADISWIFDLEGEEGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ ++ +V+STGGGAV N Y+ +GI ++L+ ++ QR RP
Sbjct: 64 ERIINELTQLQGVVLSTGGGAVMSKENRNYLSARGIVIYLETTVDKQYQRTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL + E L ++ + L+EE
Sbjct: 122 LLQGADDPRQVLEDLAKVRNPLYEE 146
>gi|363891612|ref|ZP_09318790.1| shikimate 5-dehydrogenase [Eubacteriaceae bacterium CM2]
gi|361965155|gb|EHL18146.1| shikimate 5-dehydrogenase [Eubacteriaceae bacterium CM2]
Length = 412
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 25/197 (12%)
Query: 23 SLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLG 82
++ A+ L +G + E ++++N + I I ++GM GSGKTT+GK +S + G
Sbjct: 222 AVKAAELFTGKKYDANIEDKIIENLKKNISN------IVIIGMPGSGKTTIGKEISKISG 275
Query: 83 YSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRP 142
D D +IE+ G +++IF+ YGE +FR+KE EV+ ++ ++STGGG++
Sbjct: 276 KKSVDIDEIIERET-GKDISQIFRDYGEEYFRQKEKEVISRIGKENNQIISTGGGSILDY 334
Query: 143 INWRYMQKGISV-WLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEER 201
N+ +++ + ++ PL+ LA D RPL SG +N L L+E+R
Sbjct: 335 ENYLSLKQNSRIYYIKRPLDKLA-------VDGRPL----SSG-----GINALEKLYEQR 378
Query: 202 GEAYAN-ANARVSLENI 217
Y + A+ + +NI
Sbjct: 379 HSLYEDFADFEIDNDNI 395
>gi|91785420|ref|YP_560626.1| shikimate kinase [Burkholderia xenovorans LB400]
gi|91689374|gb|ABE32574.1| shikimate kinase [Burkholderia xenovorans LB400]
Length = 183
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 76/133 (57%), Gaps = 5/133 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++ VG+MG+GKTTVG+ ++ L FFD D IE G + IF+L GE FRE+E
Sbjct: 10 VFFVGLMGAGKTTVGRAIARRLDRPFFDSDHEIEART-GARIPVIFELEGEAGFREREAN 68
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ +L+ +V++TGGGAV RP N ++ +G+ ++L L R +RPLL
Sbjct: 69 VISELTARENIVLATGGGAVLRPENREALRNRGVVIYLRANPHDLWLRTRR--DKNRPLL 126
Query: 179 HQCESGDAYTEAL 191
Q E A EAL
Sbjct: 127 -QTEDPKARLEAL 138
>gi|218132872|ref|ZP_03461676.1| hypothetical protein BACPEC_00733 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991745|gb|EEC57749.1| shikimate kinase [[Bacteroides] pectinophilus ATCC 43243]
Length = 175
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 84/151 (55%), Gaps = 12/151 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MG+GKTTVG+ +S + + D D IE + T + +IF YGE FFR+ ET+
Sbjct: 7 IVLIGFMGAGKTTVGRWISQNVNMKYIDTDDYIEAGQNMT-IKDIFANYGEEFFRDLETK 65
Query: 120 VLQKLSL-MRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPL 177
L++L Q V+S GGG R IN + M+K G V+L E LA+R+ G D RP+
Sbjct: 66 ALEELCEGCSQTVISVGGGMPVRDINRKLMKKLGTVVYLKAAEEELARRLD--GDDKRPM 123
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANA 208
L A + R+ L +R +AY +A
Sbjct: 124 L-------AGQDLRKRIHELIMQREDAYLDA 147
>gi|375109424|ref|ZP_09755672.1| shikimate kinase I [Alishewanella jeotgali KCTC 22429]
gi|397170984|ref|ZP_10494394.1| shikimate kinase I [Alishewanella aestuarii B11]
gi|374570514|gb|EHR41649.1| shikimate kinase I [Alishewanella jeotgali KCTC 22429]
gi|396087458|gb|EJI85058.1| shikimate kinase I [Alishewanella aestuarii B11]
Length = 172
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ +L F+D D IE+ G +A +F L GE FR +E
Sbjct: 5 RNIFLVGPMGAGKSTIGRHLAEMLHLEFYDSDQEIERRT-GADIAWVFDLEGEEGFRVRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SR 175
V+Q L+ ++ +V++TGGG+V ++ R +GI V+L+ P+E +++A D R
Sbjct: 64 ENVIQDLTELQGIVLATGGGSVLSKETRNRLSARGIVVYLETPIE---KQVARTQRDKKR 120
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYA 206
PLL E E L RL+ ER Y+
Sbjct: 121 PLLQTKEEP---KEVLERLAA---ERNPLYS 145
>gi|160895366|ref|ZP_02076137.1| hypothetical protein CLOL250_02925 [Clostridium sp. L2-50]
gi|156863059|gb|EDO56490.1| shikimate dehydrogenase [Clostridium sp. L2-50]
Length = 453
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 82/142 (57%), Gaps = 5/142 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L G MGSGKTTVGK+LS GY+F D D IE+ G ++AE+F GE +FR+ ET+
Sbjct: 290 IILTGFMGSGKTTVGKLLSERYGYTFIDTDQYIEEKC-GCTIAELFSKKGEAYFRQLETD 348
Query: 120 VLQKLSL-MRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPL 177
+L++L+ + V+STGGG R N + G ++L + E + R++ G ++RPL
Sbjct: 349 ILKELNASLTHAVLSTGGGLPLREENAAELATLGTVIYLQITPEEVISRLS--GDNTRPL 406
Query: 178 LHQCESGDAYTEALNRLSTLWE 199
L + + L + L+E
Sbjct: 407 LSGDDPEQKVRDLLTYRTPLYE 428
>gi|86139976|ref|ZP_01058541.1| shikimate kinase [Roseobacter sp. MED193]
gi|85823394|gb|EAQ43604.1| shikimate kinase [Roseobacter sp. MED193]
Length = 195
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 85/173 (49%), Gaps = 11/173 (6%)
Query: 42 QVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSV 101
Q+ + + P + I +VGMMG+GKT VG+ L+ L F D D IE + + T +
Sbjct: 6 QIAEVDASHPSPGRLKKTIVMVGMMGAGKTAVGRALAARLEVPFLDSDHEIESAANMT-I 64
Query: 102 AEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPL 160
EIF GE FFR KE +V+ +L V+STGGGA N + + G S+WL L
Sbjct: 65 PEIFARDGEAFFRRKERQVIARLLTEECGVLSTGGGAFLAAENRETITRNGASIWLQADL 124
Query: 161 EALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
E L R+ D+RPLL + E L+ R YA A+ V+
Sbjct: 125 EVLWNRVR--HRDTRPLLKTPDPRATLAE-------LYAARVPLYAKADLTVA 168
>gi|325577495|ref|ZP_08147857.1| shikimate kinase [Haemophilus parainfluenzae ATCC 33392]
gi|325160599|gb|EGC72723.1| shikimate kinase [Haemophilus parainfluenzae ATCC 33392]
Length = 180
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 84/145 (57%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMDFVDSDAVIEERA-GADISWIFDLEGEEGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ ++ +V+STGGGAV N Y+ +GI ++L+ ++ QR RP
Sbjct: 64 ERIINELTQLQGVVLSTGGGAVMSKENRNYLSARGIVIYLETSVDKQYQRTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL + E L ++ + L+EE
Sbjct: 122 LLQGTDDPRQVLEDLAKVRNPLYEE 146
>gi|336234995|ref|YP_004587611.1| shikimate kinase [Geobacillus thermoglucosidasius C56-YS93]
gi|335361850|gb|AEH47530.1| Shikimate kinase [Geobacillus thermoglucosidasius C56-YS93]
Length = 176
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 24/190 (12%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L + I L+G MG GKTT+G++++ L + F D D IE+ S+ IF+ GE +FR
Sbjct: 3 LHDKNIVLIGFMGVGKTTIGQLVAKKLDWEFIDADQEIERR-HHMSIPAIFEQKGEDYFR 61
Query: 115 EKETEVLQKL-SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGT 172
+ E E++ + S RQ V+S GGGA + + + GI V+LD+ E R+ ++
Sbjct: 62 KAERELIVDICSKERQKVLSLGGGAYLQEEVRNACLSHGIVVFLDLSWENWKDRLPSIVH 121
Query: 173 DSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPV 232
D RPLL +AL + L+E R +AY+ + RV+ L P
Sbjct: 122 D-RPLLK--------NKALEEIKQLFELRKQAYSQHHYRVA------------TDGLDPE 160
Query: 233 TIAIEALEQI 242
T+AI +E I
Sbjct: 161 TVAIRTIELI 170
>gi|261321300|ref|ZP_05960497.1| shikimate kinase [Brucella ceti M644/93/1]
gi|261293990|gb|EEX97486.1| shikimate kinase [Brucella ceti M644/93/1]
Length = 206
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 11/166 (6%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L +++ I L + + LVG+MG+GK+T+G+ ++ +L F D DT IE +V +VAE
Sbjct: 16 LHRQTETIRQLLGSKVVVLVGLMGAGKSTIGRKVANMLNLPFKDADTEIE-TVSRMTVAE 74
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEA 162
+F+ YGE FR+ E V+ +L +V++TGGGA + + GIS+W++ L+
Sbjct: 75 LFEAYGEVDFRDLERRVILRLLDDGPMVLATGGGAYMNAETRAAIAEAGISIWINADLDV 134
Query: 163 LAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
L +R++ +RPLL + + L +ER YA A
Sbjct: 135 LMERVSR--RQNRPLLRNSDPRGV-------MQRLMDERYPVYALA 171
>gi|408372696|ref|ZP_11170396.1| shikimate kinase [Alcanivorax hongdengensis A-11-3]
gi|407767671|gb|EKF76108.1| shikimate kinase [Alcanivorax hongdengensis A-11-3]
Length = 164
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 81/141 (57%), Gaps = 11/141 (7%)
Query: 66 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 125
MG+GK+T+G+ L+ L + F+D D +IE+ G + IF + GE FR +E EV+ +L+
Sbjct: 1 MGAGKSTLGRHLAQQLDFPFYDSDRVIEEKT-GADIPWIFDMEGEAGFRRREAEVIDELT 59
Query: 126 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 184
+ +V++TGGGAVT P N Y+ Q+G V+L P+E R +RPLL Q E
Sbjct: 60 RLPGIVLATGGGAVTTPENLGYLHQRGCVVYLWTPVEVQLARTR--NDKNRPLL-QTEDP 116
Query: 185 DAYTEALNRLSTLWEERGEAY 205
+A RL L+ ER Y
Sbjct: 117 EA------RLRALFAERDPLY 131
>gi|340756043|ref|ZP_08692678.1| shikimate kinase [Fusobacterium sp. D12]
gi|421501199|ref|ZP_15948172.1| shikimate kinase [Fusobacterium necrophorum subsp. funduliforme Fnf
1007]
gi|313686491|gb|EFS23326.1| shikimate kinase [Fusobacterium sp. D12]
gi|402266312|gb|EJU15752.1| shikimate kinase [Fusobacterium necrophorum subsp. funduliforme Fnf
1007]
Length = 172
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MGSGKTTVG++L+ L F D D +I + + S+++IF+ GE +FR+KE E
Sbjct: 5 IALIGFMGSGKTTVGRVLAKQLDMKFVDVDKVI-AAQEKKSISDIFQEKGEEYFRQKERE 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ + S +V++TGGG V N + +Q V+LD + + +R+ + RPLL
Sbjct: 64 IILQESTKNNVVIATGGGVVIDNENIKNLQNTCFIVYLDADVSCIYERVK--NSKHRPLL 121
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
E+ + E TL E+R Y
Sbjct: 122 QNIENLQQHIE------TLLEKRKFLY 142
>gi|261217850|ref|ZP_05932131.1| shikimate kinase [Brucella ceti M13/05/1]
gi|260922939|gb|EEX89507.1| shikimate kinase [Brucella ceti M13/05/1]
Length = 200
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 11/166 (6%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L +++ I L + + LVG+MG+GK+T+G+ ++ +L F D DT IE +V +VAE
Sbjct: 10 LHRQTETIRQLLGSKVVVLVGLMGAGKSTIGRKVANMLNLPFKDADTEIE-TVSRMTVAE 68
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEA 162
+F+ YGE FR+ E V+ +L +V++TGGGA + + GIS+W++ L+
Sbjct: 69 LFEAYGEVDFRDLERRVILRLLDDGPMVLATGGGAYMNAETRAAIAEAGISIWINADLDV 128
Query: 163 LAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
L +R++ +RPLL + + L +ER YA A
Sbjct: 129 LMERVSR--RQNRPLLRNSDPRGV-------MQRLMDERYPVYALA 165
>gi|344200278|ref|YP_004784604.1| shikimate kinase [Acidithiobacillus ferrivorans SS3]
gi|343775722|gb|AEM48278.1| Shikimate kinase [Acidithiobacillus ferrivorans SS3]
Length = 179
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 87/149 (58%), Gaps = 12/149 (8%)
Query: 59 CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKET 118
I L+G MGSGK+T+G++L+ L + D D LI S G + IF++ GE FRE+E
Sbjct: 4 SIILIGPMGSGKSTIGRLLATRLHLPYVDSDALIV-SHTGVDIPTIFEIEGESGFRERER 62
Query: 119 EVLQKLSLMRQ-LVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+V+ L+ + +V++TGGGA+ P N R++++ G ++LDV ++ +RI +RP
Sbjct: 63 KVIADLATQSEAIVLATGGGAILDPANRRHLRRMGKVIYLDVSVDEQLKRIRH--DRNRP 120
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAY 205
LL T+ +RL TL E+R Y
Sbjct: 121 LLQN-------TDLDSRLQTLAEQRHTLY 142
>gi|344996380|ref|YP_004798723.1| shikimate kinase [Caldicellulosiruptor lactoaceticus 6A]
gi|343964599|gb|AEM73746.1| Shikimate kinase [Caldicellulosiruptor lactoaceticus 6A]
Length = 172
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 99/173 (57%), Gaps = 11/173 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I L G MGSGKTT+GK+++ L D D+ + + G ++ +IF+++GE FRE E
Sbjct: 2 KNIVLTGFMGSGKTTIGKLIAEKLDIELIDTDSEVIKEF-GMTIDKIFEVHGEKKFREVE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVW-LDVPLEALAQRIAAVGTDSRP 176
T+V++++S + +V+STGGG V P N + +++ ++ L E++ +R+ D+RP
Sbjct: 61 TKVIERVSKLENVVISTGGGVVLNPENVKLLRENSVIYFLYASAESILKRLK--DDDTRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 229
LL +SGD L+ + L R Y N + ++ + + +L + + S+
Sbjct: 119 LL---KSGD----KLSNIIKLLNMRMPFYKNCDFEINTDILTPELAAEKIISI 164
>gi|338997248|ref|ZP_08635949.1| shikimate kinase [Halomonas sp. TD01]
gi|338765845|gb|EGP20776.1| shikimate kinase [Halomonas sp. TD01]
Length = 188
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 81/126 (64%), Gaps = 7/126 (5%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L+G MG+GK+T+G++L+ L SFFD D I+ G + IF + GE FR++E++
Sbjct: 7 IFLIGPMGAGKSTIGRLLAAELSRSFFDSDHAIQDRC-GADIPWIFDVEGEPGFRQRESQ 65
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD-SRPL 177
++ +L+ + +VV+TGGGAV R N R + ++G V+L L + Q++ D +RPL
Sbjct: 66 MIDELTQLPSVVVATGGGAVLREENRRALRERGTVVYL---LTTVDQQLKRTAKDRNRPL 122
Query: 178 LHQCES 183
L QC++
Sbjct: 123 L-QCDN 127
>gi|262037643|ref|ZP_06011088.1| shikimate kinase [Leptotrichia goodfellowii F0264]
gi|261748323|gb|EEY35717.1| shikimate kinase [Leptotrichia goodfellowii F0264]
Length = 172
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 88/160 (55%), Gaps = 17/160 (10%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I L+GM SGKTTVGK+L+ + Y +D D +E++ + ++EIF GE +FR E
Sbjct: 2 KNIILIGMPASGKTTVGKLLAKKINYEHYDADRYLEKN-EEKRISEIFSEKGEEYFRNLE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+ L++LS +++STGGGAV R N ++K GI V+L ++ +A+ RP
Sbjct: 61 EKYLKELSEKNGVIISTGGGAVKRKENMEELKKNGIIVFLSRKVDDIAKE----NHKYRP 116
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
LL E+ + L+ ER E Y A +++EN
Sbjct: 117 LLQNIEN----------IHKLYGERIELYRKY-ADITVEN 145
>gi|220931455|ref|YP_002508363.1| shikimate kinase [Halothermothrix orenii H 168]
gi|219992765|gb|ACL69368.1| Shikimate kinase [Halothermothrix orenii H 168]
Length = 171
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 84/155 (54%), Gaps = 13/155 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I LVG MG+GK++VGK+L+ L Y F D D LI G + +IF YGEG+FR+ E E
Sbjct: 3 ISLVGFMGTGKSSVGKLLAEKLNYPFLDTDDLIVNKA-GMGIPQIFSKYGEGYFRKLEEE 61
Query: 120 VLQK-LSLMRQLVVSTGGGAVTRPINWRYMQKGIS-VWLDVPLEALAQRIAAVGTDSRPL 177
VL+ ++ V++TGGG V P N + ++ + V L E + +RI+ D RPL
Sbjct: 62 VLRHVVTTGDNFVLATGGGIVISPYNRKLLKDYTTPVLLSASPEVIYERISG---DKRPL 118
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
L + L ++ L ER + Y+ + +V
Sbjct: 119 LFT-------DDPLEKIKELLAEREQYYSQFDNQV 146
>gi|23502877|ref|NP_699004.1| shikimate kinase [Brucella suis 1330]
gi|62290874|ref|YP_222667.1| shikimate kinase [Brucella abortus bv. 1 str. 9-941]
gi|82700786|ref|YP_415360.1| shikimate kinase [Brucella melitensis biovar Abortus 2308]
gi|161619945|ref|YP_001593832.1| shikimate kinase [Brucella canis ATCC 23365]
gi|163844049|ref|YP_001628453.1| shikimate kinase [Brucella suis ATCC 23445]
gi|189025089|ref|YP_001935857.1| shikimate kinase [Brucella abortus S19]
gi|225853463|ref|YP_002733696.1| shikimate kinase [Brucella melitensis ATCC 23457]
gi|256370428|ref|YP_003107939.1| shikimate kinase [Brucella microti CCM 4915]
gi|261755735|ref|ZP_05999444.1| shikimate kinase [Brucella suis bv. 3 str. 686]
gi|265987581|ref|ZP_06100138.1| shikimate kinase [Brucella pinnipedialis M292/94/1]
gi|340791614|ref|YP_004757079.1| shikimate kinase [Brucella pinnipedialis B2/94]
gi|376272253|ref|YP_005150831.1| shikimate kinase [Brucella abortus A13334]
gi|376275383|ref|YP_005115822.1| shikimate kinase [Brucella canis HSK A52141]
gi|376281672|ref|YP_005155678.1| shikimate kinase [Brucella suis VBI22]
gi|384212377|ref|YP_005601461.1| shikimate kinase [Brucella melitensis M5-90]
gi|384225664|ref|YP_005616828.1| shikimate kinase [Brucella suis 1330]
gi|384409478|ref|YP_005598099.1| Shikimate kinase [Brucella melitensis M28]
gi|384446015|ref|YP_005604734.1| shikimate kinase [Brucella melitensis NI]
gi|423168007|ref|ZP_17154710.1| shikimate kinase [Brucella abortus bv. 1 str. NI435a]
gi|423169617|ref|ZP_17156292.1| shikimate kinase [Brucella abortus bv. 1 str. NI474]
gi|423175393|ref|ZP_17162062.1| shikimate kinase [Brucella abortus bv. 1 str. NI486]
gi|423177757|ref|ZP_17164402.1| shikimate kinase [Brucella abortus bv. 1 str. NI488]
gi|423179050|ref|ZP_17165691.1| shikimate kinase [Brucella abortus bv. 1 str. NI010]
gi|423182181|ref|ZP_17168818.1| shikimate kinase [Brucella abortus bv. 1 str. NI016]
gi|423186877|ref|ZP_17173491.1| shikimate kinase [Brucella abortus bv. 1 str. NI021]
gi|423190687|ref|ZP_17177295.1| shikimate kinase [Brucella abortus bv. 1 str. NI259]
gi|75496110|sp|Q57AM8.1|AROK_BRUAB RecName: Full=Shikimate kinase; Short=SK
gi|81751897|sp|Q8FY59.1|AROK_BRUSU RecName: Full=Shikimate kinase; Short=SK
gi|115312138|sp|Q2YR42.1|AROK_BRUA2 RecName: Full=Shikimate kinase; Short=SK
gi|254806768|sp|B2S8S9.1|AROK_BRUA1 RecName: Full=Shikimate kinase; Short=SK
gi|254806769|sp|A9M9B4.1|AROK_BRUC2 RecName: Full=Shikimate kinase; Short=SK
gi|254806770|sp|C0RFS0.1|AROK_BRUMB RecName: Full=Shikimate kinase; Short=SK
gi|254806771|sp|B0CJD1.1|AROK_BRUSI RecName: Full=Shikimate kinase; Short=SK
gi|23348906|gb|AAN30919.1| shikimate kinase [Brucella suis 1330]
gi|62197006|gb|AAX75306.1| AroK, shikimate kinase [Brucella abortus bv. 1 str. 9-941]
gi|82616887|emb|CAJ11986.1| Shikimate kinase:ATP/GTP-binding site motif A (P-loop) [Brucella
melitensis biovar Abortus 2308]
gi|161336756|gb|ABX63061.1| Shikimate kinase [Brucella canis ATCC 23365]
gi|163674772|gb|ABY38883.1| Shikimate kinase [Brucella suis ATCC 23445]
gi|189020661|gb|ACD73383.1| Shikimate kinase [Brucella abortus S19]
gi|225641828|gb|ACO01742.1| Shikimate kinase [Brucella melitensis ATCC 23457]
gi|256000591|gb|ACU48990.1| shikimate kinase [Brucella microti CCM 4915]
gi|261745488|gb|EEY33414.1| shikimate kinase [Brucella suis bv. 3 str. 686]
gi|264659778|gb|EEZ30039.1| shikimate kinase [Brucella pinnipedialis M292/94/1]
gi|326410025|gb|ADZ67090.1| Shikimate kinase [Brucella melitensis M28]
gi|326539742|gb|ADZ87957.1| Shikimate kinase [Brucella melitensis M5-90]
gi|340560073|gb|AEK55311.1| shikimate kinase [Brucella pinnipedialis B2/94]
gi|343383844|gb|AEM19336.1| shikimate kinase [Brucella suis 1330]
gi|349744004|gb|AEQ09547.1| shikimate kinase [Brucella melitensis NI]
gi|358259271|gb|AEU07006.1| shikimate kinase [Brucella suis VBI22]
gi|363399859|gb|AEW16829.1| Shikimate kinase [Brucella abortus A13334]
gi|363403950|gb|AEW14245.1| Shikimate kinase [Brucella canis HSK A52141]
gi|374535837|gb|EHR07358.1| shikimate kinase [Brucella abortus bv. 1 str. NI486]
gi|374539756|gb|EHR11259.1| shikimate kinase [Brucella abortus bv. 1 str. NI435a]
gi|374543296|gb|EHR14779.1| shikimate kinase [Brucella abortus bv. 1 str. NI474]
gi|374548959|gb|EHR20405.1| shikimate kinase [Brucella abortus bv. 1 str. NI488]
gi|374551994|gb|EHR23423.1| shikimate kinase [Brucella abortus bv. 1 str. NI016]
gi|374552366|gb|EHR23794.1| shikimate kinase [Brucella abortus bv. 1 str. NI010]
gi|374554457|gb|EHR25868.1| shikimate kinase [Brucella abortus bv. 1 str. NI259]
gi|374557589|gb|EHR28985.1| shikimate kinase [Brucella abortus bv. 1 str. NI021]
Length = 200
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 11/166 (6%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L +++ I L + + LVG+MG+GK+T+G+ ++ +L F D DT IE +V +VAE
Sbjct: 10 LHRQTETIRQLLGSKVVVLVGLMGAGKSTIGRKVANMLNLPFKDADTEIE-TVSRMTVAE 68
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEA 162
+F+ YGE FR+ E V+ +L +V++TGGGA + + GIS+W++ L+
Sbjct: 69 LFEAYGEVEFRDLERRVILRLLDDGPMVLATGGGAYMNAETRAAIAEAGISIWINADLDV 128
Query: 163 LAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
L +R++ +RPLL + + L +ER YA A
Sbjct: 129 LMERVSR--RQNRPLLRNSDPRGV-------MQRLMDERYPVYALA 165
>gi|260546137|ref|ZP_05821877.1| shikimate kinase [Brucella abortus NCTC 8038]
gi|260562935|ref|ZP_05833421.1| shikimate kinase [Brucella melitensis bv. 1 str. 16M]
gi|260567498|ref|ZP_05837968.1| shikimate kinase [Brucella suis bv. 4 str. 40]
gi|260755703|ref|ZP_05868051.1| shikimate kinase [Brucella abortus bv. 6 str. 870]
gi|260758928|ref|ZP_05871276.1| shikimate kinase [Brucella abortus bv. 4 str. 292]
gi|260760650|ref|ZP_05872993.1| shikimate kinase [Brucella abortus bv. 2 str. 86/8/59]
gi|261214978|ref|ZP_05929259.1| shikimate kinase [Brucella abortus bv. 3 str. Tulya]
gi|261314936|ref|ZP_05954133.1| shikimate kinase [Brucella pinnipedialis M163/99/10]
gi|261316508|ref|ZP_05955705.1| shikimate kinase [Brucella pinnipedialis B2/94]
gi|261751172|ref|ZP_05994881.1| shikimate kinase [Brucella suis bv. 5 str. 513]
gi|294851260|ref|ZP_06791933.1| shikimate kinase [Brucella sp. NVSL 07-0026]
gi|297247259|ref|ZP_06930977.1| shikimate kinase [Brucella abortus bv. 5 str. B3196]
gi|260096244|gb|EEW80120.1| shikimate kinase [Brucella abortus NCTC 8038]
gi|260152951|gb|EEW88043.1| shikimate kinase [Brucella melitensis bv. 1 str. 16M]
gi|260157016|gb|EEW92096.1| shikimate kinase [Brucella suis bv. 4 str. 40]
gi|260669246|gb|EEX56186.1| shikimate kinase [Brucella abortus bv. 4 str. 292]
gi|260671082|gb|EEX57903.1| shikimate kinase [Brucella abortus bv. 2 str. 86/8/59]
gi|260675811|gb|EEX62632.1| shikimate kinase [Brucella abortus bv. 6 str. 870]
gi|260916585|gb|EEX83446.1| shikimate kinase [Brucella abortus bv. 3 str. Tulya]
gi|261295731|gb|EEX99227.1| shikimate kinase [Brucella pinnipedialis B2/94]
gi|261303962|gb|EEY07459.1| shikimate kinase [Brucella pinnipedialis M163/99/10]
gi|261740925|gb|EEY28851.1| shikimate kinase [Brucella suis bv. 5 str. 513]
gi|294819849|gb|EFG36848.1| shikimate kinase [Brucella sp. NVSL 07-0026]
gi|297174428|gb|EFH33775.1| shikimate kinase [Brucella abortus bv. 5 str. B3196]
Length = 206
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 11/166 (6%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L +++ I L + + LVG+MG+GK+T+G+ ++ +L F D DT IE +V +VAE
Sbjct: 16 LHRQTETIRQLLGSKVVVLVGLMGAGKSTIGRKVANMLNLPFKDADTEIE-TVSRMTVAE 74
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEA 162
+F+ YGE FR+ E V+ +L +V++TGGGA + + GIS+W++ L+
Sbjct: 75 LFEAYGEVEFRDLERRVILRLLDDGPMVLATGGGAYMNAETRAAIAEAGISIWINADLDV 134
Query: 163 LAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
L +R++ +RPLL + + L +ER YA A
Sbjct: 135 LMERVSR--RQNRPLLRNSDPRGV-------MQRLMDERYPVYALA 171
>gi|222087379|ref|YP_002545916.1| shikimate kinase [Agrobacterium radiobacter K84]
gi|221724827|gb|ACM27983.1| shikimate kinase protein [Agrobacterium radiobacter K84]
Length = 196
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 14/170 (8%)
Query: 41 AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTS 100
A+ L+++++ L R + VG+MG+GK+++G++++ LG F D D IE+ V +
Sbjct: 9 AESLRDRAR---AALGTRNLVFVGLMGAGKSSIGRVVANQLGIPFVDTDIEIER-VSRMT 64
Query: 101 VAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVP 159
+ E+F YGE FR E V+++L VVSTGGGA R++++ G+SVWL
Sbjct: 65 IPELFAAYGEEEFRALEMRVIKRLLKGGPRVVSTGGGAFINERTRRHVKRSGLSVWLKAD 124
Query: 160 LEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
L+ L +R++ D+RPLL + + L RL T R YA A+
Sbjct: 125 LDVLWERVSK--RDTRPLLKT----ENPKQTLERLMT---ARYPIYAEAD 165
>gi|261758966|ref|ZP_06002675.1| shikimate kinase [Brucella sp. F5/99]
gi|261738950|gb|EEY26946.1| shikimate kinase [Brucella sp. F5/99]
Length = 200
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 11/166 (6%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L +++ I L + + LVG+MG+GK+T+G+ ++ +L F D DT IE +V +VAE
Sbjct: 10 LHRQTETIRQLLGSKVVVLVGLMGAGKSTIGRKVANMLNLPFKDADTEIE-TVSRMTVAE 68
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEA 162
+F+ YGE FR+ E V+ +L +V++TGGGA + + GIS+W++ L+
Sbjct: 69 LFEAYGEVEFRDLERRVILRLLDDGPMVLATGGGAYMNAETRTAIAEAGISIWINADLDV 128
Query: 163 LAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
L +R++ +RPLL + + L +ER YA A
Sbjct: 129 LMERVSR--RQNRPLLRNSDPRGV-------MQRLMDERYPVYALA 165
>gi|56476682|ref|YP_158271.1| shikimate kinase [Aromatoleum aromaticum EbN1]
gi|81598874|sp|Q5P5P2.1|AROK_AZOSE RecName: Full=Shikimate kinase; Short=SK
gi|56312725|emb|CAI07370.1| putative shikimate kinase I protein [Aromatoleum aromaticum EbN1]
Length = 175
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ LVGMMG+GKTTVG+ + F DCD IE G V IF++ GE FR +E++
Sbjct: 3 VVLVGMMGAGKTTVGREYAKRHQMRFVDCDHEIEART-GVKVPTIFEIEGEAGFRRRESQ 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L +L+ LV++TGGG V P N + +GI V+L+VP + L +R +RPLL
Sbjct: 62 LLDELTHETGLVLATGGGVVLDPANRAVLAARGIVVYLNVPTQVLWERTR--NDRNRPLL 119
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ R+ +L+ ER Y
Sbjct: 120 Q-------VSNPRERIESLYRERDPLY 139
>gi|404316657|ref|ZP_10964590.1| shikimate kinase [Ochrobactrum anthropi CTS-325]
Length = 196
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 17/170 (10%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L K++ I L + + LVG+MG+GK+TVG+ + +LG F D DT IE +V ++ E
Sbjct: 10 LHEKAELIRDLLGSKVVVLVGLMGAGKSTVGRKAAALLGLPFRDADTEIE-AVSRMTIPE 68
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVP 159
+F+ YGE FR+ E V+ +L +V++TGGGA TR R G+SVWL+
Sbjct: 69 LFEAYGEVEFRDLERRVIMRLLEDGPMVLATGGGAYMNAETRAAIGR---AGVSVWLNAE 125
Query: 160 LEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
++ L +R++ +RPLL + +N ER YA A+
Sbjct: 126 IDILMERVSR--RQNRPLLKNSDPRGVMLRLMN-------ERYPVYALAD 166
>gi|296446199|ref|ZP_06888146.1| 3-dehydroquinate synthase [Methylosinus trichosporium OB3b]
gi|296256236|gb|EFH03316.1| 3-dehydroquinate synthase [Methylosinus trichosporium OB3b]
Length = 592
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L+GR I LVGMMGSGKT++G+ L+ L F D D I + G S+ +IF YGE FR
Sbjct: 25 LAGRSIVLVGMMGSGKTSIGQRLAQRLSLPFKDADAEIVAAAAGMSIPDIFAKYGEAHFR 84
Query: 115 EKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
+ E V+ +L +++TGGGA + R ++G+S+W D + L +R+ G
Sbjct: 85 DCERRVIARLLAGEPCILATGGGAFMDEGTRERIRERGLSLWFDAAHDVLLRRVRRKG-- 142
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
RPLL + L L +ER Y A+ V ++A
Sbjct: 143 DRPLLQTSDPAAV-------LRRLMDERYPVYRQADIAVLSRDVA 180
>gi|409441768|ref|ZP_11268639.1| Shikimate kinase [Rhizobium mesoamericanum STM3625]
gi|408746760|emb|CCM79875.1| Shikimate kinase [Rhizobium mesoamericanum STM3625]
Length = 191
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
G CI L+GMMGSGKT+VG+ L+G LG F D D IE + ++ EIF +GE +FR+
Sbjct: 17 GCCIVLIGMMGSGKTSVGRPLAGRLGLDFIDADAEIE-AAHRMTIPEIFAQHGETYFRDV 75
Query: 117 ETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEAL 163
E +L +L + VV+TGGGA + R +KG+S+WL + L
Sbjct: 76 ERRMLARLLAEGRKVVATGGGAFMNAETRARIAEKGVSIWLKADFDGL 123
>gi|444309326|ref|ZP_21144965.1| shikimate kinase [Ochrobactrum intermedium M86]
gi|443487384|gb|ELT50147.1| shikimate kinase [Ochrobactrum intermedium M86]
Length = 196
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 90/167 (53%), Gaps = 11/167 (6%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L K++ I L + + LVG+MG+GK+TVG+ + +LG F D DT IE +V +V E
Sbjct: 10 LHEKAELIRDLLGSKVVVLVGLMGAGKSTVGRKAASLLGLPFRDADTEIE-AVSRMTVPE 68
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEA 162
+F+ YGE FR+ E V+ +L +V++TGGGA + + G+S+WL+ ++
Sbjct: 69 LFEAYGEVEFRDLERRVIMRLLEDGPMVLATGGGAYMNAETRAAIARAGVSIWLNAEIDI 128
Query: 163 LAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
L +R++ +RPLL + +N ER YA A+
Sbjct: 129 LMERVSR--RQNRPLLKNSDPRGVMLRLMN-------ERYPVYALAD 166
>gi|148244686|ref|YP_001219380.1| shikimate kinase I [Candidatus Vesicomyosocius okutanii HA]
gi|146326513|dbj|BAF61656.1| shikimate kinase I [Candidatus Vesicomyosocius okutanii HA]
Length = 174
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 75/126 (59%), Gaps = 4/126 (3%)
Query: 56 SGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFRE 115
S R I LVG MGSGKT+VG+ L+ +L FFD D I G S+ IF + GE FR+
Sbjct: 5 SSRNIILVGPMGSGKTSVGRRLACILNRDFFDSDFEIVART-GVSINHIFDVEGEKGFRK 63
Query: 116 KETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTDS 174
+E ++L L ++ +V++TGGG V P N + +++G ++L +E L + + + S
Sbjct: 64 REMQILADLCEIKHIVIATGGGIVINPQNRKILKQGNFVIYLSSTVEQLLK--YTMNSKS 121
Query: 175 RPLLHQ 180
RPLL Q
Sbjct: 122 RPLLEQ 127
>gi|452944227|ref|YP_007500392.1| shikimate kinase [Hydrogenobaculum sp. HO]
gi|452882645|gb|AGG15349.1| shikimate kinase [Hydrogenobaculum sp. HO]
Length = 162
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 92/184 (50%), Gaps = 27/184 (14%)
Query: 66 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 125
M SGKT+VG ILS L ++F D D IE ++ T + EIF GE FFR+ E + L+ +S
Sbjct: 1 MCSGKTSVGNILSSRLNFTFIDVDNEIENRLNMT-IEEIFSEKGESFFRDFEIKTLKDVS 59
Query: 126 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 184
+ V+STGGG +M QKG V+LDVP E R + +RPLL +
Sbjct: 60 KPKS-VISTGGGLGANKEAMEFMKQKGFVVFLDVPFEEFYNRCKDLP--NRPLLRK---- 112
Query: 185 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 244
+L L +L R + Y+ A+ R ++ +P TIA + ++ E
Sbjct: 113 -----SLEELRSLHNRRYDVYSMAHQRFD-------------ATKSPETIAEDIIKHYEQ 154
Query: 245 FLKE 248
F ++
Sbjct: 155 FKRD 158
>gi|311109531|ref|YP_003982384.1| shikimate kinase [Achromobacter xylosoxidans A8]
gi|310764220|gb|ADP19669.1| shikimate kinase [Achromobacter xylosoxidans A8]
Length = 213
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++LVGMMG+GKTT+G+ L+ LG F D D +E G V IF++ GE FR +E+
Sbjct: 44 VFLVGMMGAGKTTIGRGLARALGREFMDLDHELEARC-GVRVPVIFEIEGEAGFRRRESA 102
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
L++ + R ++++TGGGA+ P N R ++GI V+L ++ L +R +RPLL
Sbjct: 103 ALEECTQRRNIILATGGGAILAPENRQRLHERGIVVYLRASVDELFRRTCR--DRNRPLL 160
Query: 179 HQCESGDAYTEALNRLSTLWEE 200
+ + + L++E
Sbjct: 161 ATADPRGTLRDLMTLREPLYKE 182
>gi|126726513|ref|ZP_01742354.1| shikimate kinase [Rhodobacterales bacterium HTCC2150]
gi|126704376|gb|EBA03468.1| shikimate kinase [Rhodobacteraceae bacterium HTCC2150]
Length = 184
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 53 PYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGF 112
PY + + LVGMMGSGK+ +G LS V+ F D D IE + T +AEIF GE F
Sbjct: 5 PYELKKTVVLVGMMGSGKSAIGSALSQVIDVPFNDLDREIETAAQAT-IAEIFTRDGEAF 63
Query: 113 FREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVG 171
FR++E +VL+++ V+STGGGA N + + +G SV L ++ L R+
Sbjct: 64 FRKREHQVLERMLKGTPSVLSTGGGAFMAQNNRKLIGTQGFSVCLGADVDLLWSRVRHKT 123
Query: 172 TDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
T RPLL + L L+ ++ ER YA A+
Sbjct: 124 T--RPLLQTADP-------LATLTEIYNERAATYALAD 152
>gi|392394461|ref|YP_006431063.1| shikimate kinase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390525539|gb|AFM01270.1| shikimate kinase [Desulfitobacterium dehalogenans ATCC 51507]
Length = 205
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 86/151 (56%), Gaps = 13/151 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I LVG MG+GK+TVG+ L+ +L F D D IE+ + T V+EIF+ +GE FR +E
Sbjct: 34 IVLVGFMGTGKSTVGRRLAKLLEREFIDTDVEIERLTEMT-VSEIFRRHGETRFRSEERL 92
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++++L+ + V++TGGG V P NW+ + + G+ + L PL+ + +RI + RPLL
Sbjct: 93 LVKRLAEHKGYVIATGGGTVLNPENWQDLARSGVIIGLYAPLDEIYKRIGY--RNDRPLL 150
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANAN 209
GD + LW +R Y A+
Sbjct: 151 R----GDR-----QEVELLWAKRQPIYDQAD 172
>gi|372487772|ref|YP_005027337.1| shikimate kinase [Dechlorosoma suillum PS]
gi|359354325|gb|AEV25496.1| shikimate kinase [Dechlorosoma suillum PS]
Length = 190
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I LVG+MG+GKTT+G++L+ LG F D D +E S G S+ IF++ GE FR++E+
Sbjct: 8 IILVGLMGAGKTTIGRLLAKRLGKRFVDSDHEVE-SRTGVSIPVIFEIEGEAGFRKRESM 66
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
V++ LS LV++TGGG V P N ++ G V+L P E L R +RPLL
Sbjct: 67 VIEDLSRESGLVMATGGGVVLSPENREAIKAGGFVVYLCAPPELLYARTR--NDRNRPLL 124
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ L RL L+ +R Y
Sbjct: 125 Q-------VADPLGRLRQLYVQRDPLY 144
>gi|154245578|ref|YP_001416536.1| shikimate kinase., 3-dehydroquinate synthase [Xanthobacter
autotrophicus Py2]
gi|154159663|gb|ABS66879.1| Shikimate kinase., 3-dehydroquinate synthase [Xanthobacter
autotrophicus Py2]
Length = 594
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 95/178 (53%), Gaps = 25/178 (14%)
Query: 36 APIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQS 95
AP+ A +++ L R I LVGM G+GK++VG+ L+ LG F D D IE++
Sbjct: 9 APVTPADMVRR--------LGRRSIVLVGMPGAGKSSVGRRLAKRLGLPFVDADEEIERA 60
Query: 96 VDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKG 151
S+ EIF GE FRE E V+ +L V++TGGGA TR R +G
Sbjct: 61 A-CMSIPEIFARRGEVEFREGEKRVVARLLQSGPSVLATGGGAFMNSETRDAVAR---QG 116
Query: 152 ISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
+SVWL L L +R+ TD RPLL Q GD +L+TL ++RG+ YA A+
Sbjct: 117 VSVWLRADLHTLLRRVKKR-TD-RPLLAQ---GDPAA----KLATLLQQRGDTYALAD 165
>gi|421486526|ref|ZP_15934070.1| shikimate kinase [Achromobacter piechaudii HLE]
gi|400195230|gb|EJO28222.1| shikimate kinase [Achromobacter piechaudii HLE]
Length = 185
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++LVGMMG+GKTT+G+ L+ LG F D D +E G V IF++ GE FR +E+
Sbjct: 16 VFLVGMMGAGKTTIGRSLARALGREFMDLDHELEARC-GVRVPVIFEIEGETGFRRRESA 74
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
L++ + R ++++TGGGA+ P N R + ++GI V+L ++ L +R +RPLL
Sbjct: 75 ALEECTQRRNIILATGGGAILAPENRRRLHERGIVVYLRASVDELFRRTCR--DRNRPLL 132
Query: 179 HQCESGDAYTEALNRLSTLWEE 200
+ + + L++E
Sbjct: 133 ATADPRGTLRDLMTLREPLYKE 154
>gi|294497718|ref|YP_003561418.1| shikimate kinase [Bacillus megaterium QM B1551]
gi|384048463|ref|YP_005496480.1| shikimate kinase [Bacillus megaterium WSH-002]
gi|294347655|gb|ADE67984.1| shikimate kinase [Bacillus megaterium QM B1551]
gi|345446154|gb|AEN91171.1| Shikimate kinase [Bacillus megaterium WSH-002]
Length = 185
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Query: 52 EPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEG 111
E L + I +G MG GKTT+G++++ L F D D IE+ + ++IFK +GE
Sbjct: 5 EMSLREKSIVFIGFMGVGKTTIGELVAKKLYRDFVDIDQEIEKMFQMPT-SQIFKEFGEE 63
Query: 112 FFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAV 170
FFR KE EV+ +LS R ++S GGGA + I + I +LD+ ++ +RI+ +
Sbjct: 64 FFRNKEKEVISQLSQQRLKIISVGGGAFLQEEIQKICLSNCIVFFLDLSWDSWKERISLI 123
Query: 171 GTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 220
DSRP+L +L + L+ R Y+N +++V +N+ ++
Sbjct: 124 -IDSRPVLQ--------GRSLEDIEELFYTRQAIYSNHHSKVETDNLDIE 164
>gi|312127273|ref|YP_003992147.1| shikimate kinase [Caldicellulosiruptor hydrothermalis 108]
gi|311777292|gb|ADQ06778.1| Shikimate kinase [Caldicellulosiruptor hydrothermalis 108]
Length = 172
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 99/173 (57%), Gaps = 11/173 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I L G MGSGKTT+GK+++ L D D+ + + G ++ +IF+++GE FRE E
Sbjct: 2 KNIVLTGFMGSGKTTIGKLIAEKLDIELIDTDSEVIKEF-GMTIDKIFEVHGEKKFREVE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
T V++++S + +V+STGGG V P N + +++ G+ +L E++ +R+ D+RP
Sbjct: 61 TRVIERVSKLENVVISTGGGVVLNPENVKLLRENGVIYFLYASAESILKRLK--DDDTRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 229
LL ++GD L+ + L R Y N + ++ + + +L + + S+
Sbjct: 119 LL---KNGD----KLSNIIRLLNMRMPFYKNCDFEINTDILTPELAAEKIISI 164
>gi|254501848|ref|ZP_05113999.1| shikimate kinase [Labrenzia alexandrii DFL-11]
gi|222437919|gb|EEE44598.1| shikimate kinase [Labrenzia alexandrii DFL-11]
Length = 205
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I LVG+MG GK+TVGK L+ LG F D D+ IE++ + T V+EIF +GE +FR
Sbjct: 31 LGKRSIVLVGIMGCGKSTVGKRLAQRLGLEFVDADSEIERAANMT-VSEIFSEHGEPYFR 89
Query: 115 EKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
E V+ +L V++TGGGA ++ G+S+WL V E + R+ T
Sbjct: 90 SGEERVIARLLQEGPQVLATGGGAFISDATRSEIETNGLSIWLKVDFETVMARVRRRST- 148
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
RPLL + + L ER YA A V+ +++
Sbjct: 149 -RPLLRNPDPEGT-------MRKLMAEREPVYAQAQLTVTSKDV 184
>gi|418937433|ref|ZP_13491073.1| Shikimate kinase [Rhizobium sp. PDO1-076]
gi|375055889|gb|EHS52109.1| Shikimate kinase [Rhizobium sp. PDO1-076]
Length = 211
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 4/146 (2%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + VG+MG+GK+ VG++++ LG F D D IE+ V S++E+F YGE FR
Sbjct: 20 LGRRNLVFVGLMGAGKSAVGRMVANQLGLPFVDTDVEIER-VSRMSISELFTAYGEDEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
ET V+++L VVSTGGGA + +++ GIS+WL L+ L +R+ D
Sbjct: 79 ALETRVIKRLLRSGPRVVSTGGGAFINDKTRKQIERGGISLWLKADLDVLWERVNK--RD 136
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWE 199
RPLL + +++ ++E
Sbjct: 137 HRPLLKTENPKQTLKDLMDKRYPIYE 162
>gi|299132833|ref|ZP_07026028.1| Shikimate kinase [Afipia sp. 1NLS2]
gi|298592970|gb|EFI53170.1| Shikimate kinase [Afipia sp. 1NLS2]
Length = 204
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Query: 43 VLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVA 102
V +N+ +I L R I VGMMGSGK+TVG+ L+ L F D D IE G ++
Sbjct: 10 VAQNQIADILSALGPRAIVFVGMMGSGKSTVGRRLAARLRLPFVDADHEIETRHGGMTIT 69
Query: 103 EIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLE 161
EIF +GE +FRE E +V+ L V++TGGGA R R K +S+WL
Sbjct: 70 EIFANHGEPYFREGEAKVISALLDGGAQVLATGGGAFLREDTRARIRDKAVSIWLKADGP 129
Query: 162 ALAQRIAAVGTDSRPLLHQCESGDAYTEAL 191
+ +R+ RPLL Q E A E L
Sbjct: 130 TVLRRVKR--RSDRPLL-QTEDPAATIERL 156
>gi|218281481|ref|ZP_03487924.1| hypothetical protein EUBIFOR_00489 [Eubacterium biforme DSM 3989]
gi|218217403|gb|EEC90941.1| hypothetical protein EUBIFOR_00489 [Eubacterium biforme DSM 3989]
Length = 427
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 88/165 (53%), Gaps = 20/165 (12%)
Query: 55 LSGRC-IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFF 113
L RC I L+GM +GKTT+GK+L LG FFD D +I G S+ EIF+ GE F
Sbjct: 256 LKDRCNIVLIGMPSAGKTTIGKMLEEKLGKEFFDLDDMIIAKA-GKSIPEIFQESGEAGF 314
Query: 114 REKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGT 172
R ETEV + S M +++TGGGA+ +N +++ GI++++D ++ L + +
Sbjct: 315 RAIETEVAIEASKMNNKIIATGGGAIKHKVNMDFLRLNGITIFIDRDIDKL------ISS 368
Query: 173 D-SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
D +RPL + + L + +ER Y A V++ N
Sbjct: 369 DPNRPL----------SSSKQALQQMHKERYPLYQKYAAYVAVNN 403
>gi|420271882|ref|ZP_14774233.1| shikimate kinase I [Escherichia coli PA22]
gi|390712340|gb|EIN85297.1| shikimate kinase I [Escherichia coli PA22]
Length = 173
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 7/146 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F+D D IE+ G V +F L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRT-GADVGWVFDLEGEEGFRDRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SR 175
+V+ +L+ + +V++TGGG+V +R R +G+ V+L+ +E +++A D R
Sbjct: 64 EKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVGVYLETTIE---KQLARTQRDKKR 120
Query: 176 PLLHQCESGDAYTEAL-NRLSTLWEE 200
PLLH EAL N + L+EE
Sbjct: 121 PLLHVETPPREVLEALANERNPLYEE 146
>gi|422873292|ref|ZP_16919777.1| shikimate kinase [Clostridium perfringens F262]
gi|380305677|gb|EIA17954.1| shikimate kinase [Clostridium perfringens F262]
Length = 167
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 87/151 (57%), Gaps = 14/151 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ R + L+GM GSGKTT+G+ LS VL +F D D IE+S G + E+F E FR
Sbjct: 1 MKKRGVLLIGMPGSGKTTIGRELSKVLKMNFLDMDEFIERST-GKEIKELFA-QEEEVFR 58
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
+ E++ + LS ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+
Sbjct: 59 DLESKSCELLSTLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDI---DTEG 115
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
RPLL + RL+ L+ +R + Y
Sbjct: 116 RPLLW---------DGKERLTNLYRDRIDLY 137
>gi|284048939|ref|YP_003399278.1| shikimate kinase [Acidaminococcus fermentans DSM 20731]
gi|283953160|gb|ADB47963.1| Shikimate kinase [Acidaminococcus fermentans DSM 20731]
Length = 166
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 82/147 (55%), Gaps = 15/147 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM G+GKTT+GK LS VLG D D ++ Q G ++ +F+ GE FR+ ET
Sbjct: 4 IVLIGMPGAGKTTIGKKLSKVLGRPVIDADDVVVQQT-GRTIKSLFQ-EGENVFRDAETA 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ L+ +++S GGG V RP N Y+Q+ G +L+ L A+A + V SRPLL
Sbjct: 62 AIRSLAAKDGIIISCGGGVVKRPENMAYLQETGKIFFLNRDLAAIAGCVDKV---SRPLL 118
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ E +RL+ L+ ER Y
Sbjct: 119 NSAE---------DRLTQLYRERMPLY 136
>gi|306837276|ref|ZP_07470162.1| shikimate kinase [Brucella sp. NF 2653]
gi|306842845|ref|ZP_07475485.1| shikimate kinase [Brucella sp. BO2]
gi|306287039|gb|EFM58550.1| shikimate kinase [Brucella sp. BO2]
gi|306407648|gb|EFM63841.1| shikimate kinase [Brucella sp. NF 2653]
Length = 200
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 11/166 (6%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L +++ I L + + LVG+MG+GK+T+G+ ++ +L F D DT IE +V +VAE
Sbjct: 10 LHRQTETIRQLLGSKVVVLVGLMGAGKSTIGRKVANMLNLPFKDADTEIE-TVSRMTVAE 68
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEA 162
+F+ YGE FR+ E V+ +L +V++TGGGA + + GIS+W++ L+
Sbjct: 69 LFEAYGEVEFRDLERRVILRLLDDGPMVLATGGGAYMNAETRAAIAEAGISIWINADLDV 128
Query: 163 LAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
L +R++ +RPLL + + L +ER YA A
Sbjct: 129 LMERVSR--RQNRPLLKNSDPRGV-------MQRLMDERYPVYALA 165
>gi|194336818|ref|YP_002018612.1| shikimate kinase [Pelodictyon phaeoclathratiforme BU-1]
gi|194309295|gb|ACF43995.1| Shikimate kinase [Pelodictyon phaeoclathratiforme BU-1]
Length = 264
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 84/156 (53%), Gaps = 7/156 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L G GSGK+T+G +L+ LGY F D D IEQ G ++ IF GE FFR E +
Sbjct: 81 IFLTGFSGSGKSTIGPLLANSLGYEFVDLDQSIEQDT-GKTITRIFAEEGEEFFRALELQ 139
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
L L +++S GGGA+ + + +QK G V+L P + LA+R+ RPLL
Sbjct: 140 RLSALVTQNNMIISLGGGALENDLAYALIQKSGTLVYLKSPSKTLARRLC--NKTDRPLL 197
Query: 179 HQCESGDAYT--EALNRLSTLWEERGEAYANANARV 212
+ E G + E ++ST+ +R Y +A+ V
Sbjct: 198 -RGEKGRKLSREEIEEKISTILAKREPRYESADITV 232
>gi|265983025|ref|ZP_06095760.1| shikimate kinase [Brucella sp. 83/13]
gi|264661617|gb|EEZ31878.1| shikimate kinase [Brucella sp. 83/13]
Length = 206
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 11/166 (6%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L +++ I L + + LVG+MG+GK+T+G+ ++ +L F D DT IE +V +VAE
Sbjct: 16 LHRQTETIRQLLGSKVVVLVGLMGAGKSTIGRKVANMLNLPFKDADTEIE-TVSRMTVAE 74
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEA 162
+F+ YGE FR+ E V+ +L +V++TGGGA + + GIS+W++ L+
Sbjct: 75 LFEAYGEVEFRDLERRVILRLLDDGPMVLATGGGAYMNAETRAAIAEAGISIWINADLDV 134
Query: 163 LAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
L +R++ +RPLL + + L +ER YA A
Sbjct: 135 LMERVSR--RQNRPLLKNSDPRGV-------MQRLMDERYPVYALA 171
>gi|329851120|ref|ZP_08265877.1| shikimate kinase family protein [Asticcacaulis biprosthecum C19]
gi|328839966|gb|EGF89538.1| shikimate kinase family protein [Asticcacaulis biprosthecum C19]
Length = 194
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Query: 54 YLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFF 113
++ + + LVG+MG GKTT+GK L+ F D D IE++ G SVA+IF YGE F
Sbjct: 19 FILPKTVALVGLMGVGKTTIGKRLAEHFALPFVDADEEIEKAA-GQSVADIFAHYGEKGF 77
Query: 114 REKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGT 172
R+ E V+ +L +++TGGGA+T ++ K I+VWL L+ L++R+A
Sbjct: 78 RDGEERVISRLLDSPPQILATGGGALTSAKTRENLKAKAITVWLKTDLKVLSRRVA--NK 135
Query: 173 DSRPLLHQCESGDAYTE 189
RPLL D E
Sbjct: 136 PHRPLLKDRSPMDVLRE 152
>gi|92116111|ref|YP_575840.1| shikimate kinase [Nitrobacter hamburgensis X14]
gi|91799005|gb|ABE61380.1| shikimate kinase [Nitrobacter hamburgensis X14]
Length = 224
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 2/110 (1%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L GR + LVGMMG+GK+T+G+ L+ L F D D IE++ G S+ EIF+ +GE FR
Sbjct: 23 LGGRSLVLVGMMGAGKSTIGRRLATRLAMRFVDADAEIERAA-GMSIPEIFETHGEPHFR 81
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEAL 163
+ E V+ +L LV++TGGGAV R R ++ IS+WL E +
Sbjct: 82 DGEARVIARLLSGGPLVLATGGGAVLREETRARIRERAISIWLKADAEVI 131
>gi|312135449|ref|YP_004002787.1| shikimate kinase [Caldicellulosiruptor owensensis OL]
gi|311775500|gb|ADQ04987.1| Shikimate kinase [Caldicellulosiruptor owensensis OL]
Length = 172
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 100/173 (57%), Gaps = 11/173 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I L G MGSGKTT+GK+++ L D D+ + + + G ++ +IF+++GE FRE E
Sbjct: 2 KNIVLTGFMGSGKTTIGKLIAEKLDIELVDTDSEVIKEL-GMTIDKIFEVHGEKKFREVE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
T+V++++S +V+STGGG V P N + +++ G+ +L E++ +R+ D+RP
Sbjct: 61 TKVIERISKYENVVISTGGGVVLNPENVKLLRENGVIYFLYASAESILKRLK--DDDTRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 229
LL ++GD L+ + L R Y N + ++ + + +L + + S+
Sbjct: 119 LL---KNGD----KLSNIIRLLNMRMPFYKNCDFEINTDILTPELAAEKIISI 164
>gi|225626411|ref|ZP_03784450.1| Shikimate kinase [Brucella ceti str. Cudo]
gi|225618068|gb|EEH15111.1| Shikimate kinase [Brucella ceti str. Cudo]
Length = 217
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 11/166 (6%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L +++ I L + + LVG+MG+GK+T+G+ ++ +L F D DT IE +V +VAE
Sbjct: 27 LHRQTETIRQLLGSKVVVLVGLMGAGKSTIGRKVANMLNLPFKDADTEIE-TVSRMTVAE 85
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEA 162
+F+ YGE FR+ E V+ +L +V++TGGGA + + GIS+W++ L+
Sbjct: 86 LFEAYGEVEFRDLERRVILRLLDDGPMVLATGGGAYMNAETRTAIAEAGISIWINADLDV 145
Query: 163 LAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
L +R++ +RPLL + + L +ER YA A
Sbjct: 146 LMERVSR--RQNRPLLRNSDPRGV-------MQRLMDERYPVYALA 182
>gi|399019199|ref|ZP_10721348.1| 3-dehydroquinate synthase [Herbaspirillum sp. CF444]
gi|398098346|gb|EJL88633.1| 3-dehydroquinate synthase [Herbaspirillum sp. CF444]
Length = 567
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 78/125 (62%), Gaps = 6/125 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVG+MG+GKTT+G+ L+ L F D D IE S G S+ IF++ GE FR++E +
Sbjct: 5 IFLVGLMGAGKTTIGRALAKKLNKRFVDSDHEIE-SRTGASIPVIFEIEGEESFRKREAD 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD-SRPL 177
V+++LS + +V++TGGGA+ R Y+ Q+G ++L + + QR G D +RPL
Sbjct: 64 VIRELSAQQDIVLATGGGAILRAETRAYLKQRGTVIYLRAGINQILQR---TGRDKNRPL 120
Query: 178 LHQCE 182
L +
Sbjct: 121 LQTAD 125
>gi|307731210|ref|YP_003908434.1| shikimate kinase [Burkholderia sp. CCGE1003]
gi|307585745|gb|ADN59143.1| Shikimate kinase [Burkholderia sp. CCGE1003]
Length = 182
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 5/133 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++ VG+MG+GKTTVG+ ++ L FFD D IE G + IF+L GE FRE+E
Sbjct: 10 VFFVGLMGAGKTTVGRAIARRLDRPFFDSDHEIEART-GARIPVIFELEGEAGFREREAS 68
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ +L+ +V++TGGGAV RP N +Q +G+ ++L L R +RPLL
Sbjct: 69 VISELTGRDNIVLATGGGAVLRPENRAALQSRGVVIYLRANPHDLWLRTRR--DKNRPLL 126
Query: 179 HQCESGDAYTEAL 191
Q E A EAL
Sbjct: 127 -QTEDPKARLEAL 138
>gi|334317435|ref|YP_004550054.1| shikimate kinase [Sinorhizobium meliloti AK83]
gi|384530561|ref|YP_005714649.1| shikimate kinase [Sinorhizobium meliloti BL225C]
gi|384537261|ref|YP_005721346.1| shikimate kinase [Sinorhizobium meliloti SM11]
gi|407721744|ref|YP_006841406.1| shikimate kinase [Sinorhizobium meliloti Rm41]
gi|418400165|ref|ZP_12973708.1| shikimate kinase [Sinorhizobium meliloti CCNWSX0020]
gi|433614498|ref|YP_007191296.1| Shikimate kinase [Sinorhizobium meliloti GR4]
gi|333812737|gb|AEG05406.1| Shikimate kinase [Sinorhizobium meliloti BL225C]
gi|334096429|gb|AEG54440.1| Shikimate kinase [Sinorhizobium meliloti AK83]
gi|336034153|gb|AEH80085.1| Shikimate kinase [Sinorhizobium meliloti SM11]
gi|359505841|gb|EHK78360.1| shikimate kinase [Sinorhizobium meliloti CCNWSX0020]
gi|407319976|emb|CCM68580.1| Shikimate kinase [Sinorhizobium meliloti Rm41]
gi|429552688|gb|AGA07697.1| Shikimate kinase [Sinorhizobium meliloti GR4]
Length = 192
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + +G+MG+GK+ +G++ + LG F D D IE+ V +V+++F YGE FR
Sbjct: 20 LGKRNLVFIGLMGAGKSAIGRLTAQALGVPFVDSDHEIER-VSRMTVSDLFATYGEEEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
E VL++L VVSTGGGA + R+++K G+++WL+ L+ L +R+ D
Sbjct: 79 ALEARVLKRLLRSGPRVVSTGGGAYINERSRRHIKKGGLTIWLNAELDVLWERVNK--RD 136
Query: 174 SRPLL 178
+RPLL
Sbjct: 137 TRPLL 141
>gi|148558869|ref|YP_001259841.1| shikimate kinase [Brucella ovis ATCC 25840]
gi|237816382|ref|ZP_04595375.1| Shikimate kinase [Brucella abortus str. 2308 A]
gi|260884729|ref|ZP_05896343.1| shikimate kinase [Brucella abortus bv. 9 str. C68]
gi|261221080|ref|ZP_05935361.1| shikimate kinase [Brucella ceti B1/94]
gi|261323971|ref|ZP_05963168.1| shikimate kinase [Brucella neotomae 5K33]
gi|265992053|ref|ZP_06104610.1| shikimate kinase [Brucella melitensis bv. 1 str. Rev.1]
gi|265997040|ref|ZP_06109597.1| shikimate kinase [Brucella ceti M490/95/1]
gi|265999266|ref|ZP_05465589.2| shikimate kinase [Brucella melitensis bv. 2 str. 63/9]
gi|148370126|gb|ABQ60105.1| shikimate kinase [Brucella ovis ATCC 25840]
gi|237788449|gb|EEP62664.1| Shikimate kinase [Brucella abortus str. 2308 A]
gi|260874257|gb|EEX81326.1| shikimate kinase [Brucella abortus bv. 9 str. C68]
gi|260919664|gb|EEX86317.1| shikimate kinase [Brucella ceti B1/94]
gi|261299951|gb|EEY03448.1| shikimate kinase [Brucella neotomae 5K33]
gi|262551508|gb|EEZ07498.1| shikimate kinase [Brucella ceti M490/95/1]
gi|263003119|gb|EEZ15412.1| shikimate kinase [Brucella melitensis bv. 1 str. Rev.1]
gi|263092933|gb|EEZ17108.1| shikimate kinase [Brucella melitensis bv. 2 str. 63/9]
Length = 217
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 11/166 (6%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L +++ I L + + LVG+MG+GK+T+G+ ++ +L F D DT IE +V +VAE
Sbjct: 27 LHRQTETIRQLLGSKVVVLVGLMGAGKSTIGRKVANMLNLPFKDADTEIE-TVSRMTVAE 85
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEA 162
+F+ YGE FR+ E V+ +L +V++TGGGA + + GIS+W++ L+
Sbjct: 86 LFEAYGEVEFRDLERRVILRLLDDGPMVLATGGGAYMNAETRAAIAEAGISIWINADLDV 145
Query: 163 LAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
L +R++ +RPLL + + L +ER YA A
Sbjct: 146 LMERVSR--RQNRPLLRNSDPRGV-------MQRLMDERYPVYALA 182
>gi|398831120|ref|ZP_10589299.1| shikimate kinase [Phyllobacterium sp. YR531]
gi|398212688|gb|EJM99290.1| shikimate kinase [Phyllobacterium sp. YR531]
Length = 211
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 4/136 (2%)
Query: 48 SQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKL 107
++ I L R I LVG+MG+GK+TVGK L+ ++ FFD D IE+ V ++ E+F+
Sbjct: 17 AKTIRERLGTRSIVLVGLMGAGKSTVGKKLASLVELPFFDADHEIEK-VSTMTIPELFEA 75
Query: 108 YGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQR 166
YGE FR+ E V+ ++ +V++TGGGA + G+SVWL L+ L R
Sbjct: 76 YGEAEFRDLERRVIARMLEEGPIVLATGGGAYMNEQTRGAIASTGVSVWLKAELDVLMAR 135
Query: 167 IAAVGTDSRPLLHQCE 182
+ V +RPLL +
Sbjct: 136 V--VRKQNRPLLKNSD 149
>gi|15966430|ref|NP_386783.1| shikimate kinase [Sinorhizobium meliloti 1021]
gi|81634006|sp|Q92ME6.1|AROK_RHIME RecName: Full=Shikimate kinase; Short=SK
gi|15075701|emb|CAC47256.1| Putative shikimate kinase I [Sinorhizobium meliloti 1021]
Length = 192
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + +G+MG+GK+ +G++ + LG F D D IE+ V +V+++F YGE FR
Sbjct: 20 LGKRNLVFIGLMGAGKSAIGRLTAQALGVPFVDSDHEIER-VSRMTVSDLFATYGEEEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
E VL++L VVSTGGGA + R+++K G+++WL+ L+ L +R+ D
Sbjct: 79 ALEARVLKRLLRSGPRVVSTGGGAYINERSRRHIKKGGLTIWLNAELDVLWERVNK--RD 136
Query: 174 SRPLL 178
+RPLL
Sbjct: 137 TRPLL 141
>gi|268318032|ref|YP_003291751.1| shikimate kinase [Rhodothermus marinus DSM 4252]
gi|262335566|gb|ACY49363.1| Shikimate kinase [Rhodothermus marinus DSM 4252]
Length = 192
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 88/163 (53%), Gaps = 4/163 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL G MG GK+T+G +L+ LGY+F D D LI + G S+ EIF GE FR E +
Sbjct: 11 IYLTGFMGCGKSTIGPLLARRLGYTFLDLDALIVRQA-GRSIPEIFAEGGEAAFRALERD 69
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
L++ + + V++TGGGA+ N + ++ G V+L V + LA+R+A RPLL
Sbjct: 70 ALRRTAALDAYVIATGGGALVSDDNLAWALRNGRVVYLQVSADELARRLAPEAA-GRPLL 128
Query: 179 HQCESGDAYTEAL-NRLSTLWEERGEAYANANARVSLENIAVK 220
AL R++ + R Y A+ V+ + ++V+
Sbjct: 129 QDRHRRPLQGAALRRRIAAMLARREPWYRRAHHVVATDGLSVE 171
>gi|375293211|ref|YP_005127750.1| shikimate kinase [Corynebacterium diphtheriae INCA 402]
gi|376248620|ref|YP_005140564.1| shikimate kinase [Corynebacterium diphtheriae HC04]
gi|419860916|ref|ZP_14383556.1| shikimate kinase [Corynebacterium diphtheriae bv. intermedius str.
NCTC 5011]
gi|371582882|gb|AEX46548.1| shikimate kinase [Corynebacterium diphtheriae INCA 402]
gi|372115188|gb|AEX81246.1| shikimate kinase [Corynebacterium diphtheriae HC04]
gi|387982600|gb|EIK56101.1| shikimate kinase [Corynebacterium diphtheriae bv. intermedius str.
NCTC 5011]
Length = 182
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ LVG G+GKTT+G+ L+ L S D D LIEQ + G +F GE FR+ E E
Sbjct: 18 VVLVGPPGAGKTTIGRRLANALNTSVVDSDALIEQ-LQGKPCGAVFSELGEPNFRDLEAE 76
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
V+ +L VVS GGGAVT + ++K I VW+DV +R A +SRPLL
Sbjct: 77 VID-FALTTAGVVSLGGGAVTTESVRQKLRKQIVVWVDVSAAEGVRRTAV--ENSRPLLD 133
Query: 180 QCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLG 222
D Y+E L + ++E + A+ + R + +A LG
Sbjct: 134 ATNPLDRYSELLAQRRDFYKEVADYRAHTDGRSPQQIVADILG 176
>gi|359401305|ref|ZP_09194275.1| shikimate kinase [Novosphingobium pentaromativorans US6-1]
gi|357597376|gb|EHJ59124.1| shikimate kinase [Novosphingobium pentaromativorans US6-1]
Length = 191
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 86/158 (54%), Gaps = 13/158 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I LVGMMG+GK++VG+ L+ + F D D IE S S+ EIF+ YGE +FR+ E
Sbjct: 22 RPIVLVGMMGTGKSSVGRRLASLFHCPFVDADEEIEHSAQ-MSIPEIFETYGEDYFRDGE 80
Query: 118 TEVLQKLSLMRQ--LVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
V+ +L + V++TGGGA P + + +++WLD +E L +R + D+
Sbjct: 81 RRVIARLIDDTEGCRVIATGGGAFCNPETRALILDRALTIWLDSEVETLVERTSR--KDN 138
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
RPLL + G+ E L RL EER Y A V
Sbjct: 139 RPLL---KDGNP-REILARLR---EERRPHYEQAPIHV 169
>gi|148552937|ref|YP_001260519.1| shikimate kinase [Sphingomonas wittichii RW1]
gi|148498127|gb|ABQ66381.1| shikimate kinase [Sphingomonas wittichii RW1]
Length = 187
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 84/152 (55%), Gaps = 11/152 (7%)
Query: 44 LKNKSQEIEPYLS--GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSV 101
L + Q + P L R + L+G+MG+GK+T+GK L+ + F D D IE++ G ++
Sbjct: 5 LDDMPQSLPPNLPHFDRPLVLIGLMGAGKSTIGKRLAARVHLPFVDADQEIERAA-GLTI 63
Query: 102 AEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLD 157
+EIF +GE FR+ E V+ +L R V++TGGGA TR + + + +VWLD
Sbjct: 64 SEIFARFGEKEFRDGERRVIARLIDGRPKVIATGGGAFMQEETRAL---ILDRATAVWLD 120
Query: 158 VPLEALAQRIAAVGTDSRPLLHQCESGDAYTE 189
+E LA R+ +RPLL ++ + E
Sbjct: 121 ADIEVLADRVGR-REGTRPLLKDRDAREVLAE 151
>gi|311280725|ref|YP_003942956.1| shikimate kinase [Enterobacter cloacae SCF1]
gi|308749920|gb|ADO49672.1| Shikimate kinase [Enterobacter cloacae SCF1]
Length = 184
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 4/151 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L+G G GKTT+G+ LS Y F D D +++Q T VA+I G FR +ET+
Sbjct: 5 IFLIGARGCGKTTIGRRLSEACQYQFIDTDQILQQRAQMT-VADIVANEGWSGFRARETQ 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDS-RPL 177
LQ ++ Q V++TGGG + P+N +M Q G+ ++L P+ LA R+ A +S RP
Sbjct: 64 TLQTVTAA-QHVIATGGGIILAPVNREFMRQNGVVIYLKAPVSVLAGRLEAFPEESQRPT 122
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANA 208
L + E L + L+ E +A
Sbjct: 123 LTGKPIAEEVREVLAQRDALYREAAHTIVDA 153
>gi|445064351|ref|ZP_21376419.1| shikimate kinase [Brachyspira hampsonii 30599]
gi|444504268|gb|ELV04962.1| shikimate kinase [Brachyspira hampsonii 30599]
Length = 177
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 86/151 (56%), Gaps = 14/151 (9%)
Query: 56 SGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFRE 115
+ + I+++G+ G GK+ + K+L+ L Y F+D D+ IE +G+++ EIF GE +FR
Sbjct: 8 NSKIIFIIGLPGCGKSALSKMLAKKLNYQFYDMDSFIEDK-EGSTITEIFANNGETYFRN 66
Query: 116 KETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDS 174
E++VLQ+LS + V+STGGG V N M+ KG+++++D + + + I
Sbjct: 67 LESDVLQELSSLSNAVISTGGGIVLSEKNRNIMKDKGLTIFVDRNPDIILENIDP---SQ 123
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
RPLL + + N+L L ++R Y
Sbjct: 124 RPLLAKDK---------NKLLELSKQRDRLY 145
>gi|417710197|ref|ZP_12359211.1| shikimate kinase family protein [Shigella flexneri VA-6]
gi|420334117|ref|ZP_14835745.1| shikimate kinase 1 [Shigella flexneri K-1770]
gi|332996423|gb|EGK16050.1| shikimate kinase family protein [Shigella flexneri VA-6]
gi|391243162|gb|EIQ02458.1| shikimate kinase 1 [Shigella flexneri K-1770]
Length = 173
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 7/146 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F+D D IE+ G V +F L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQKLNMEFYDSDQEIEKRT-GADVGWVFDLEGEEGFRDRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SR 175
+V+ +L+ + +V++TGGG+V +R R +G+ V+L+ +E +++A D R
Sbjct: 64 EKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKR 120
Query: 176 PLLHQCESGDAYTEAL-NRLSTLWEE 200
PLLH EAL N + L+EE
Sbjct: 121 PLLHVETPPREVLEALANERNPLYEE 146
>gi|12642804|gb|AAK00352.1|AF329876_8 putative shikimate-kinase [Acinetobacter sp. BD413]
Length = 150
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 82/143 (57%), Gaps = 11/143 (7%)
Query: 66 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 125
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL L+
Sbjct: 1 MGAGKTTVGRHLAELLGREFLDSDHEIERRT-GATIPWIFEKEGEIGFRSRETIVLDDLT 59
Query: 126 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 184
R LV++TGGG VT+P N Y++ +G+ V+L P+E QR +RPLL Q E+
Sbjct: 60 SRRDLVLATGGGVVTQPANRSYLKTRGVVVYLYTPVELQLQR--TYRDKNRPLL-QVENP 116
Query: 185 DAYTEALNRLSTLWEERGEAYAN 207
+ RL L + R Y +
Sbjct: 117 E------QRLRDLLKLRDPLYRD 133
>gi|74313895|ref|YP_312314.1| shikimate kinase I [Shigella sonnei Ss046]
gi|82545745|ref|YP_409692.1| shikimate kinase I [Shigella boydii Sb227]
gi|82778795|ref|YP_405144.1| shikimate kinase I [Shigella dysenteriae Sd197]
gi|90111581|ref|YP_026215.2| shikimate kinase I [Escherichia coli str. K-12 substr. MG1655]
gi|157158436|ref|YP_001464844.1| shikimate kinase I [Escherichia coli E24377A]
gi|157162866|ref|YP_001460184.1| shikimate kinase I [Escherichia coli HS]
gi|161367509|ref|NP_289929.2| shikimate kinase I [Escherichia coli O157:H7 str. EDL933]
gi|161486094|ref|NP_756024.2| shikimate kinase I [Escherichia coli CFT073]
gi|161486377|ref|NP_839497.2| shikimate kinase I [Shigella flexneri 2a str. 2457T]
gi|162139753|ref|NP_312259.2| shikimate kinase I [Escherichia coli O157:H7 str. Sakai]
gi|170018374|ref|YP_001723328.1| shikimate kinase I [Escherichia coli ATCC 8739]
gi|170082907|ref|YP_001732227.1| shikimate kinase I [Escherichia coli str. K-12 substr. DH10B]
gi|187731282|ref|YP_001882065.1| shikimate kinase I [Shigella boydii CDC 3083-94]
gi|188495609|ref|ZP_03002879.1| shikimate kinase [Escherichia coli 53638]
gi|195934878|ref|ZP_03080260.1| shikimate kinase I [Escherichia coli O157:H7 str. EC4024]
gi|208813581|ref|ZP_03254910.1| shikimate kinase [Escherichia coli O157:H7 str. EC4045]
gi|215488671|ref|YP_002331102.1| shikimate kinase I [Escherichia coli O127:H6 str. E2348/69]
gi|218555935|ref|YP_002388848.1| shikimate kinase I [Escherichia coli IAI1]
gi|218560447|ref|YP_002393360.1| shikimate kinase I [Escherichia coli S88]
gi|218691666|ref|YP_002399878.1| shikimate kinase I [Escherichia coli ED1a]
gi|218697070|ref|YP_002404737.1| shikimate kinase I [Escherichia coli 55989]
gi|218702133|ref|YP_002409762.1| shikimate kinase I [Escherichia coli IAI39]
gi|218706980|ref|YP_002414499.1| shikimate kinase I [Escherichia coli UMN026]
gi|222158087|ref|YP_002558226.1| Shikimate kinase 1 [Escherichia coli LF82]
gi|229560210|ref|YP_671353.2| shikimate kinase I [Escherichia coli 536]
gi|229774933|ref|YP_690742.2| shikimate kinase I [Shigella flexneri 5 str. 8401]
gi|229775956|ref|YP_858981.2| shikimate kinase I [Escherichia coli APEC O1]
gi|238902481|ref|YP_002928277.1| shikimate kinase I [Escherichia coli BW2952]
gi|251786643|ref|YP_003000947.1| shikimate kinase I [Escherichia coli BL21(DE3)]
gi|254163318|ref|YP_003046426.1| shikimate kinase I [Escherichia coli B str. REL606]
gi|254290068|ref|YP_003055816.1| shikimate kinase I [Escherichia coli BL21(DE3)]
gi|254795304|ref|YP_003080141.1| shikimate kinase I [Escherichia coli O157:H7 str. TW14359]
gi|260846174|ref|YP_003223952.1| shikimate kinase I [Escherichia coli O103:H2 str. 12009]
gi|260857497|ref|YP_003231388.1| shikimate kinase I [Escherichia coli O26:H11 str. 11368]
gi|260870116|ref|YP_003236518.1| shikimate kinase I [Escherichia coli O111:H- str. 11128]
gi|261254433|ref|ZP_05946966.1| shikimate kinase I [Escherichia coli O157:H7 str. FRIK966]
gi|307311948|ref|ZP_07591586.1| Shikimate kinase [Escherichia coli W]
gi|309785871|ref|ZP_07680502.1| shikimate kinase family protein [Shigella dysenteriae 1617]
gi|312968304|ref|ZP_07782514.1| shikimate kinase family protein [Escherichia coli 2362-75]
gi|312972347|ref|ZP_07786521.1| shikimate kinase family protein [Escherichia coli 1827-70]
gi|378711184|ref|YP_005276077.1| shikimate kinase [Escherichia coli KO11FL]
gi|383180554|ref|YP_005458559.1| shikimate kinase I [Shigella sonnei 53G]
gi|384544951|ref|YP_005729015.1| Shikimate kinase 1 [Shigella flexneri 2002017]
gi|386601402|ref|YP_006102908.1| shikimate kinase [Escherichia coli IHE3034]
gi|386610750|ref|YP_006126236.1| shikimate kinase I [Escherichia coli W]
gi|386616172|ref|YP_006135838.1| hypothetical protein UMNK88_4156 [Escherichia coli UMNK88]
gi|386631267|ref|YP_006150987.1| shikimate kinase I [Escherichia coli str. 'clone D i2']
gi|386636187|ref|YP_006155906.1| shikimate kinase I [Escherichia coli str. 'clone D i14']
gi|386699670|ref|YP_006163507.1| shikimate kinase I [Escherichia coli KO11FL]
gi|386711269|ref|YP_006174990.1| shikimate kinase I [Escherichia coli W]
gi|387508759|ref|YP_006161015.1| shikimate kinase I [Escherichia coli O55:H7 str. RM12579]
gi|387609082|ref|YP_006097938.1| shikimate kinase I [Escherichia coli 042]
gi|387614065|ref|YP_006117181.1| shikimate kinase I [Escherichia coli ETEC H10407]
gi|387623042|ref|YP_006130670.1| shikimate kinase I [Escherichia coli DH1]
gi|387884539|ref|YP_006314841.1| shikimate kinase I [Escherichia coli Xuzhou21]
gi|388479848|ref|YP_492042.1| shikimate kinase I [Escherichia coli str. K-12 substr. W3110]
gi|404376763|ref|ZP_10981915.1| shikimate kinase 1 [Escherichia sp. 1_1_43]
gi|407471339|ref|YP_006782218.1| shikimate kinase I [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407480005|ref|YP_006777154.1| shikimate kinase I [Escherichia coli O104:H4 str. 2011C-3493]
gi|410480566|ref|YP_006768112.1| shikimate kinase I [Escherichia coli O104:H4 str. 2009EL-2050]
gi|415773689|ref|ZP_11486284.1| shikimate kinase family protein [Escherichia coli 3431]
gi|415787746|ref|ZP_11494293.1| shikimate kinase family protein [Escherichia coli EPECa14]
gi|415795899|ref|ZP_11497356.1| shikimate kinase family protein [Escherichia coli E128010]
gi|415810552|ref|ZP_11502919.1| shikimate kinase family protein [Escherichia coli LT-68]
gi|415820238|ref|ZP_11509427.1| shikimate kinase family protein [Escherichia coli OK1180]
gi|415830953|ref|ZP_11516751.1| shikimate kinase family protein [Escherichia coli OK1357]
gi|415839038|ref|ZP_11520856.1| shikimate kinase family protein [Escherichia coli RN587/1]
gi|415851272|ref|ZP_11528021.1| shikimate kinase family protein [Shigella sonnei 53G]
gi|415858804|ref|ZP_11533256.1| shikimate kinase family protein [Shigella flexneri 2a str. 2457T]
gi|416266138|ref|ZP_11641529.1| Shikimate kinase I [Shigella dysenteriae CDC 74-1112]
gi|416280334|ref|ZP_11645301.1| Shikimate kinase I [Shigella boydii ATCC 9905]
gi|416294091|ref|ZP_11650660.1| Shikimate kinase I [Shigella flexneri CDC 796-83]
gi|416812116|ref|ZP_11890285.1| shikimate kinase I [Escherichia coli O55:H7 str. 3256-97]
gi|416832738|ref|ZP_11899901.1| shikimate kinase I [Escherichia coli O157:H7 str. LSU-61]
gi|416899759|ref|ZP_11929165.1| shikimate kinase family protein [Escherichia coli STEC_7v]
gi|417582984|ref|ZP_12233784.1| shikimate kinase family protein [Escherichia coli STEC_B2F1]
gi|417588473|ref|ZP_12239236.1| shikimate kinase family protein [Escherichia coli STEC_C165-02]
gi|417593781|ref|ZP_12244470.1| shikimate kinase family protein [Escherichia coli 2534-86]
gi|417598773|ref|ZP_12249399.1| shikimate kinase family protein [Escherichia coli 3030-1]
gi|417604254|ref|ZP_12254818.1| shikimate kinase family protein [Escherichia coli STEC_94C]
gi|417610016|ref|ZP_12260513.1| shikimate kinase family protein [Escherichia coli STEC_DG131-3]
gi|417614987|ref|ZP_12265440.1| shikimate kinase family protein [Escherichia coli STEC_EH250]
gi|417619995|ref|ZP_12270400.1| shikimate kinase family protein [Escherichia coli G58-1]
gi|417625456|ref|ZP_12275747.1| shikimate kinase family protein [Escherichia coli STEC_H.1.8]
gi|417630770|ref|ZP_12281004.1| shikimate kinase family protein [Escherichia coli STEC_MHI813]
gi|417636482|ref|ZP_12286691.1| shikimate kinase family protein [Escherichia coli STEC_S1191]
gi|417641294|ref|ZP_12291424.1| shikimate kinase family protein [Escherichia coli TX1999]
gi|417668858|ref|ZP_12318397.1| shikimate kinase family protein [Escherichia coli STEC_O31]
gi|417674713|ref|ZP_12324146.1| shikimate kinase family protein [Shigella dysenteriae 155-74]
gi|417684262|ref|ZP_12333603.1| shikimate kinase family protein [Shigella boydii 3594-74]
gi|417691730|ref|ZP_12340939.1| shikimate kinase family protein [Shigella boydii 5216-82]
gi|417704514|ref|ZP_12353607.1| shikimate kinase family protein [Shigella flexneri K-218]
gi|417715160|ref|ZP_12364104.1| shikimate kinase family protein [Shigella flexneri K-272]
gi|417720113|ref|ZP_12368988.1| shikimate kinase family protein [Shigella flexneri K-227]
gi|417725870|ref|ZP_12374649.1| shikimate kinase family protein [Shigella flexneri K-304]
gi|417731129|ref|ZP_12379808.1| shikimate kinase family protein [Shigella flexneri K-671]
gi|417736246|ref|ZP_12384880.1| shikimate kinase family protein [Shigella flexneri 2747-71]
gi|417746049|ref|ZP_12394565.1| shikimate kinase family protein [Shigella flexneri 2930-71]
gi|417757714|ref|ZP_12405779.1| shikimate kinase family protein [Escherichia coli DEC2B]
gi|417807020|ref|ZP_12453952.1| shikimate kinase I [Escherichia coli O104:H4 str. LB226692]
gi|417830522|ref|ZP_12477058.1| shikimate kinase family protein [Shigella flexneri J1713]
gi|417834762|ref|ZP_12481204.1| shikimate kinase I [Escherichia coli O104:H4 str. 01-09591]
gi|417945149|ref|ZP_12588385.1| shikimate kinase I [Escherichia coli XH140A]
gi|417977043|ref|ZP_12617831.1| shikimate kinase I [Escherichia coli XH001]
gi|418260217|ref|ZP_12882825.1| shikimate kinase family protein [Shigella flexneri 6603-63]
gi|418268849|ref|ZP_12887518.1| shikimate kinase family protein [Shigella sonnei str. Moseley]
gi|418305017|ref|ZP_12916811.1| shikimate kinase family protein [Escherichia coli UMNF18]
gi|418942598|ref|ZP_13495862.1| shikimate kinase I [Escherichia coli O157:H43 str. T22]
gi|418956221|ref|ZP_13508149.1| shikimate kinase I [Escherichia coli J53]
gi|418998834|ref|ZP_13546417.1| shikimate kinase family protein [Escherichia coli DEC1A]
gi|419004089|ref|ZP_13551601.1| shikimate kinase family protein [Escherichia coli DEC1B]
gi|419009762|ref|ZP_13557180.1| shikimate kinase family protein [Escherichia coli DEC1C]
gi|419015403|ref|ZP_13562741.1| shikimate kinase 1 [Escherichia coli DEC1D]
gi|419020393|ref|ZP_13567691.1| shikimate kinase family protein [Escherichia coli DEC1E]
gi|419025859|ref|ZP_13573077.1| shikimate kinase 1 [Escherichia coli DEC2A]
gi|419030989|ref|ZP_13578136.1| shikimate kinase family protein [Escherichia coli DEC2C]
gi|419036712|ref|ZP_13583787.1| shikimate kinase family protein [Escherichia coli DEC2D]
gi|419041690|ref|ZP_13588708.1| shikimate kinase family protein [Escherichia coli DEC2E]
gi|419047489|ref|ZP_13594421.1| shikimate kinase family protein [Escherichia coli DEC3A]
gi|419053138|ref|ZP_13600005.1| shikimate kinase family protein [Escherichia coli DEC3B]
gi|419059088|ref|ZP_13605889.1| shikimate kinase family protein [Escherichia coli DEC3C]
gi|419064636|ref|ZP_13611356.1| shikimate kinase family protein [Escherichia coli DEC3D]
gi|419077591|ref|ZP_13623093.1| shikimate kinase family protein [Escherichia coli DEC3F]
gi|419082566|ref|ZP_13628011.1| shikimate kinase family protein [Escherichia coli DEC4A]
gi|419088441|ref|ZP_13633792.1| shikimate kinase family protein [Escherichia coli DEC4B]
gi|419094380|ref|ZP_13639659.1| shikimate kinase family protein [Escherichia coli DEC4C]
gi|419100231|ref|ZP_13645420.1| shikimate kinase family protein [Escherichia coli DEC4D]
gi|419105984|ref|ZP_13651107.1| shikimate kinase family protein [Escherichia coli DEC4E]
gi|419111364|ref|ZP_13656415.1| shikimate kinase family protein [Escherichia coli DEC4F]
gi|419116906|ref|ZP_13661916.1| shikimate kinase family protein [Escherichia coli DEC5A]
gi|419122622|ref|ZP_13667564.1| shikimate kinase family protein [Escherichia coli DEC5B]
gi|419128162|ref|ZP_13673036.1| shikimate kinase family protein [Escherichia coli DEC5C]
gi|419133474|ref|ZP_13678301.1| shikimate kinase family protein [Escherichia coli DEC5D]
gi|419138631|ref|ZP_13683421.1| shikimate kinase 1 [Escherichia coli DEC5E]
gi|419144473|ref|ZP_13689203.1| shikimate kinase 1 [Escherichia coli DEC6A]
gi|419150528|ref|ZP_13695176.1| shikimate kinase family protein [Escherichia coli DEC6B]
gi|419155862|ref|ZP_13700418.1| shikimate kinase 1 [Escherichia coli DEC6C]
gi|419161199|ref|ZP_13705695.1| shikimate kinase 1 [Escherichia coli DEC6D]
gi|419166262|ref|ZP_13710712.1| shikimate kinase family protein [Escherichia coli DEC6E]
gi|419177172|ref|ZP_13720982.1| shikimate kinase family protein [Escherichia coli DEC7B]
gi|419182787|ref|ZP_13726396.1| shikimate kinase family protein [Escherichia coli DEC7C]
gi|419188407|ref|ZP_13731912.1| shikimate kinase family protein [Escherichia coli DEC7D]
gi|419193535|ref|ZP_13736980.1| shikimate kinase 1 [Escherichia coli DEC7E]
gi|419199087|ref|ZP_13742380.1| shikimate kinase 1 [Escherichia coli DEC8A]
gi|419205440|ref|ZP_13748603.1| shikimate kinase family protein [Escherichia coli DEC8B]
gi|419211840|ref|ZP_13754906.1| shikimate kinase family protein [Escherichia coli DEC8C]
gi|419217776|ref|ZP_13760770.1| shikimate kinase family protein [Escherichia coli DEC8D]
gi|419223527|ref|ZP_13766439.1| shikimate kinase family protein [Escherichia coli DEC8E]
gi|419234676|ref|ZP_13777443.1| shikimate kinase family protein [Escherichia coli DEC9B]
gi|419239903|ref|ZP_13782609.1| shikimate kinase family protein [Escherichia coli DEC9C]
gi|419245445|ref|ZP_13788078.1| shikimate kinase family protein [Escherichia coli DEC9D]
gi|419251307|ref|ZP_13793874.1| shikimate kinase family protein [Escherichia coli DEC9E]
gi|419256998|ref|ZP_13799498.1| shikimate kinase family protein [Escherichia coli DEC10A]
gi|419263241|ref|ZP_13805648.1| shikimate kinase family protein [Escherichia coli DEC10B]
gi|419269235|ref|ZP_13811578.1| shikimate kinase family protein [Escherichia coli DEC10C]
gi|419275280|ref|ZP_13817563.1| shikimate kinase family protein [Escherichia coli DEC10D]
gi|419280015|ref|ZP_13822257.1| shikimate kinase family protein [Escherichia coli DEC10E]
gi|419286296|ref|ZP_13828458.1| shikimate kinase family protein [Escherichia coli DEC10F]
gi|419291569|ref|ZP_13833653.1| shikimate kinase family protein [Escherichia coli DEC11A]
gi|419296855|ref|ZP_13838892.1| shikimate kinase family protein [Escherichia coli DEC11B]
gi|419302371|ref|ZP_13844363.1| shikimate kinase 1 [Escherichia coli DEC11C]
gi|419308384|ref|ZP_13850276.1| shikimate kinase 1 [Escherichia coli DEC11D]
gi|419313410|ref|ZP_13855268.1| shikimate kinase 1 [Escherichia coli DEC11E]
gi|419318823|ref|ZP_13860621.1| shikimate kinase 1 [Escherichia coli DEC12A]
gi|419325086|ref|ZP_13866773.1| shikimate kinase family protein [Escherichia coli DEC12B]
gi|419331030|ref|ZP_13872626.1| shikimate kinase 1 [Escherichia coli DEC12C]
gi|419336516|ref|ZP_13878033.1| shikimate kinase family protein [Escherichia coli DEC12D]
gi|419341929|ref|ZP_13883383.1| shikimate kinase family protein [Escherichia coli DEC12E]
gi|419351586|ref|ZP_13892916.1| shikimate kinase family protein [Escherichia coli DEC13B]
gi|419357059|ref|ZP_13898306.1| shikimate kinase family protein [Escherichia coli DEC13C]
gi|419367467|ref|ZP_13908616.1| shikimate kinase family protein [Escherichia coli DEC13E]
gi|419371957|ref|ZP_13913066.1| shikimate kinase 1 [Escherichia coli DEC14A]
gi|419377442|ref|ZP_13918461.1| shikimate kinase family protein [Escherichia coli DEC14B]
gi|419382779|ref|ZP_13923721.1| shikimate kinase family protein [Escherichia coli DEC14C]
gi|419388082|ref|ZP_13928950.1| shikimate kinase family protein [Escherichia coli DEC14D]
gi|419393523|ref|ZP_13934324.1| shikimate kinase family protein [Escherichia coli DEC15A]
gi|419398625|ref|ZP_13939387.1| shikimate kinase family protein [Escherichia coli DEC15B]
gi|419403908|ref|ZP_13944626.1| shikimate kinase family protein [Escherichia coli DEC15C]
gi|419409065|ref|ZP_13949749.1| shikimate kinase family protein [Escherichia coli DEC15D]
gi|419702211|ref|ZP_14229806.1| shikimate kinase I [Escherichia coli SCI-07]
gi|419806941|ref|ZP_14332026.1| shikimate kinase I [Escherichia coli AI27]
gi|419811706|ref|ZP_14336579.1| shikimate kinase I [Escherichia coli O32:H37 str. P4]
gi|419864080|ref|ZP_14386574.1| shikimate kinase I [Escherichia coli O103:H25 str. CVM9340]
gi|419871264|ref|ZP_14393323.1| shikimate kinase I [Escherichia coli O103:H2 str. CVM9450]
gi|419877351|ref|ZP_14398954.1| shikimate kinase I [Escherichia coli O111:H11 str. CVM9534]
gi|419881491|ref|ZP_14402812.1| shikimate kinase I [Escherichia coli O111:H11 str. CVM9545]
gi|419888140|ref|ZP_14408670.1| shikimate kinase I [Escherichia coli O111:H8 str. CVM9570]
gi|419896567|ref|ZP_14416241.1| shikimate kinase I [Escherichia coli O111:H8 str. CVM9574]
gi|419902514|ref|ZP_14421718.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM9942]
gi|419907023|ref|ZP_14425880.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM10026]
gi|420090492|ref|ZP_14602261.1| shikimate kinase I [Escherichia coli O111:H8 str. CVM9602]
gi|420096586|ref|ZP_14607955.1| shikimate kinase I [Escherichia coli O111:H8 str. CVM9634]
gi|420100946|ref|ZP_14612082.1| shikimate kinase I [Escherichia coli O111:H11 str. CVM9455]
gi|420108797|ref|ZP_14619008.1| shikimate kinase I [Escherichia coli O111:H11 str. CVM9553]
gi|420116003|ref|ZP_14625469.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM10021]
gi|420121439|ref|ZP_14630538.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM10030]
gi|420126464|ref|ZP_14635199.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM10224]
gi|420132148|ref|ZP_14640529.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM9952]
gi|420277404|ref|ZP_14779684.1| shikimate kinase I [Escherichia coli PA40]
gi|420283084|ref|ZP_14785316.1| shikimate kinase I [Escherichia coli TW06591]
gi|420288983|ref|ZP_14791165.1| shikimate kinase I [Escherichia coli TW10246]
gi|420294515|ref|ZP_14796626.1| shikimate kinase I [Escherichia coli TW11039]
gi|420300368|ref|ZP_14802411.1| shikimate kinase I [Escherichia coli TW09109]
gi|420306359|ref|ZP_14808347.1| shikimate kinase I [Escherichia coli TW10119]
gi|420311947|ref|ZP_14813875.1| shikimate kinase I [Escherichia coli EC1738]
gi|420317223|ref|ZP_14819095.1| shikimate kinase I [Escherichia coli EC1734]
gi|420323182|ref|ZP_14824998.1| shikimate kinase 1 [Shigella flexneri 2850-71]
gi|420328353|ref|ZP_14830085.1| shikimate kinase 1 [Shigella flexneri CCH060]
gi|420338893|ref|ZP_14840446.1| shikimate kinase 1 [Shigella flexneri K-315]
gi|420344568|ref|ZP_14846024.1| shikimate kinase 1 [Shigella flexneri K-404]
gi|420349365|ref|ZP_14850743.1| shikimate kinase 1 [Shigella boydii 965-58]
gi|420354880|ref|ZP_14855957.1| shikimate kinase 1 [Shigella boydii 4444-74]
gi|420360734|ref|ZP_14861688.1| shikimate kinase 1 [Shigella sonnei 3226-85]
gi|420365286|ref|ZP_14866153.1| shikimate kinase family protein [Shigella sonnei 4822-66]
gi|420377444|ref|ZP_14877053.1| shikimate kinase 1 [Shigella flexneri 1235-66]
gi|420382533|ref|ZP_14881968.1| shikimate kinase 1 [Shigella dysenteriae 225-75]
gi|420387638|ref|ZP_14886977.1| shikimate kinase 1 [Escherichia coli EPECa12]
gi|420393485|ref|ZP_14892730.1| shikimate kinase family protein [Escherichia coli EPEC C342-62]
gi|421685325|ref|ZP_16125101.1| shikimate kinase family protein [Shigella flexneri 1485-80]
gi|421814313|ref|ZP_16250017.1| shikimate kinase I [Escherichia coli 8.0416]
gi|421820148|ref|ZP_16255634.1| shikimate kinase 1 [Escherichia coli 10.0821]
gi|421826206|ref|ZP_16261559.1| shikimate kinase I [Escherichia coli FRIK920]
gi|421832957|ref|ZP_16268237.1| shikimate kinase I [Escherichia coli PA7]
gi|422818550|ref|ZP_16866762.1| shikimate kinase 1 [Escherichia coli M919]
gi|422830415|ref|ZP_16878573.1| shikimate kinase 1 [Escherichia coli B093]
gi|422833872|ref|ZP_16881937.1| shikimate kinase 1 [Escherichia coli E101]
gi|422841394|ref|ZP_16889363.1| shikimate kinase 1 [Escherichia coli H397]
gi|422960918|ref|ZP_16972111.1| shikimate kinase 1 [Escherichia coli H494]
gi|422974041|ref|ZP_16976138.1| shikimate kinase 1 [Escherichia coli TA124]
gi|422989567|ref|ZP_16980339.1| shikimate kinase 1 [Escherichia coli O104:H4 str. C227-11]
gi|422996462|ref|ZP_16987225.1| shikimate kinase 1 [Escherichia coli O104:H4 str. C236-11]
gi|423001612|ref|ZP_16992365.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 09-7901]
gi|423005271|ref|ZP_16996016.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 04-8351]
gi|423011777|ref|ZP_17002509.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-3677]
gi|423021004|ref|ZP_17011711.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4404]
gi|423026169|ref|ZP_17016864.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4522]
gi|423031988|ref|ZP_17022674.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4623]
gi|423034860|ref|ZP_17025538.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423039988|ref|ZP_17030657.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423046672|ref|ZP_17037331.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423055209|ref|ZP_17044015.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423057201|ref|ZP_17046000.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C5]
gi|423702892|ref|ZP_17677324.1| shikimate kinase 1 [Escherichia coli H730]
gi|423707664|ref|ZP_17682044.1| shikimate kinase 1 [Escherichia coli B799]
gi|423727333|ref|ZP_17701238.1| shikimate kinase I [Escherichia coli PA31]
gi|424079531|ref|ZP_17816495.1| shikimate kinase I [Escherichia coli FDA505]
gi|424085988|ref|ZP_17822471.1| shikimate kinase I [Escherichia coli FDA517]
gi|424092387|ref|ZP_17828313.1| shikimate kinase I [Escherichia coli FRIK1996]
gi|424105272|ref|ZP_17840011.1| shikimate kinase I [Escherichia coli FRIK1990]
gi|424111918|ref|ZP_17846144.1| shikimate kinase I [Escherichia coli 93-001]
gi|424117859|ref|ZP_17851688.1| shikimate kinase I [Escherichia coli PA3]
gi|424124045|ref|ZP_17857348.1| shikimate kinase I [Escherichia coli PA5]
gi|424130195|ref|ZP_17863094.1| shikimate kinase I [Escherichia coli PA9]
gi|424136517|ref|ZP_17868961.1| shikimate kinase I [Escherichia coli PA10]
gi|424143070|ref|ZP_17874933.1| shikimate kinase I [Escherichia coli PA14]
gi|424149472|ref|ZP_17880839.1| shikimate kinase I [Escherichia coli PA15]
gi|424155320|ref|ZP_17886248.1| shikimate kinase I [Escherichia coli PA24]
gi|424255306|ref|ZP_17891795.1| shikimate kinase I [Escherichia coli PA25]
gi|424333794|ref|ZP_17897703.1| shikimate kinase I [Escherichia coli PA28]
gi|424451757|ref|ZP_17903422.1| shikimate kinase I [Escherichia coli PA32]
gi|424457946|ref|ZP_17909052.1| shikimate kinase I [Escherichia coli PA33]
gi|424464409|ref|ZP_17914776.1| shikimate kinase I [Escherichia coli PA39]
gi|424470708|ref|ZP_17920515.1| shikimate kinase I [Escherichia coli PA41]
gi|424477212|ref|ZP_17926522.1| shikimate kinase I [Escherichia coli PA42]
gi|424482976|ref|ZP_17931948.1| shikimate kinase I [Escherichia coli TW07945]
gi|424489157|ref|ZP_17937699.1| shikimate kinase I [Escherichia coli TW09098]
gi|424495826|ref|ZP_17943429.1| shikimate kinase I [Escherichia coli TW09195]
gi|424502508|ref|ZP_17949390.1| shikimate kinase I [Escherichia coli EC4203]
gi|424508762|ref|ZP_17955139.1| shikimate kinase I [Escherichia coli EC4196]
gi|424516116|ref|ZP_17960743.1| shikimate kinase I [Escherichia coli TW14313]
gi|424522312|ref|ZP_17966420.1| shikimate kinase I [Escherichia coli TW14301]
gi|424528189|ref|ZP_17971897.1| shikimate kinase I [Escherichia coli EC4421]
gi|424534336|ref|ZP_17977676.1| shikimate kinase I [Escherichia coli EC4422]
gi|424540389|ref|ZP_17983325.1| shikimate kinase I [Escherichia coli EC4013]
gi|424546521|ref|ZP_17988884.1| shikimate kinase I [Escherichia coli EC4402]
gi|424552743|ref|ZP_17994579.1| shikimate kinase I [Escherichia coli EC4439]
gi|424558929|ref|ZP_18000331.1| shikimate kinase I [Escherichia coli EC4436]
gi|424565267|ref|ZP_18006263.1| shikimate kinase I [Escherichia coli EC4437]
gi|424571398|ref|ZP_18011938.1| shikimate kinase I [Escherichia coli EC4448]
gi|424577553|ref|ZP_18017598.1| shikimate kinase I [Escherichia coli EC1845]
gi|424583372|ref|ZP_18023011.1| shikimate kinase I [Escherichia coli EC1863]
gi|424748640|ref|ZP_18176780.1| shikimate kinase I [Escherichia coli O26:H11 str. CFSAN001629]
gi|424767039|ref|ZP_18194376.1| shikimate kinase I [Escherichia coli O111:H11 str. CFSAN001630]
gi|424770043|ref|ZP_18197259.1| shikimate kinase I [Escherichia coli O111:H8 str. CFSAN001632]
gi|424839607|ref|ZP_18264244.1| shikimate kinase I [Shigella flexneri 5a str. M90T]
gi|425100045|ref|ZP_18502769.1| shikimate kinase 1 [Escherichia coli 3.4870]
gi|425106143|ref|ZP_18508452.1| shikimate kinase 1 [Escherichia coli 5.2239]
gi|425112153|ref|ZP_18514066.1| shikimate kinase I [Escherichia coli 6.0172]
gi|425121701|ref|ZP_18523384.1| shikimate kinase 1 [Escherichia coli 8.0569]
gi|425128077|ref|ZP_18529237.1| shikimate kinase 1 [Escherichia coli 8.0586]
gi|425133822|ref|ZP_18534664.1| shikimate kinase 1 [Escherichia coli 8.2524]
gi|425140398|ref|ZP_18540771.1| shikimate kinase I [Escherichia coli 10.0833]
gi|425146103|ref|ZP_18546088.1| shikimate kinase 1 [Escherichia coli 10.0869]
gi|425152223|ref|ZP_18551830.1| shikimate kinase 1 [Escherichia coli 88.0221]
gi|425158100|ref|ZP_18557356.1| shikimate kinase I [Escherichia coli PA34]
gi|425164447|ref|ZP_18563326.1| shikimate kinase I [Escherichia coli FDA506]
gi|425170192|ref|ZP_18568657.1| shikimate kinase I [Escherichia coli FDA507]
gi|425176252|ref|ZP_18574363.1| shikimate kinase I [Escherichia coli FDA504]
gi|425182296|ref|ZP_18579982.1| shikimate kinase I [Escherichia coli FRIK1999]
gi|425188561|ref|ZP_18585825.1| shikimate kinase I [Escherichia coli FRIK1997]
gi|425195328|ref|ZP_18592090.1| shikimate kinase I [Escherichia coli NE1487]
gi|425201804|ref|ZP_18598003.1| shikimate kinase I [Escherichia coli NE037]
gi|425208188|ref|ZP_18603976.1| shikimate kinase I [Escherichia coli FRIK2001]
gi|425213943|ref|ZP_18609335.1| shikimate kinase I [Escherichia coli PA4]
gi|425220066|ref|ZP_18615020.1| shikimate kinase I [Escherichia coli PA23]
gi|425226614|ref|ZP_18621072.1| shikimate kinase I [Escherichia coli PA49]
gi|425232869|ref|ZP_18626901.1| shikimate kinase I [Escherichia coli PA45]
gi|425238794|ref|ZP_18632505.1| shikimate kinase I [Escherichia coli TT12B]
gi|425245031|ref|ZP_18638329.1| shikimate kinase I [Escherichia coli MA6]
gi|425251217|ref|ZP_18644153.1| shikimate kinase I [Escherichia coli 5905]
gi|425257004|ref|ZP_18649508.1| shikimate kinase I [Escherichia coli CB7326]
gi|425263257|ref|ZP_18655250.1| shikimate kinase I [Escherichia coli EC96038]
gi|425269256|ref|ZP_18660879.1| shikimate kinase I [Escherichia coli 5412]
gi|425274586|ref|ZP_18665981.1| shikimate kinase I [Escherichia coli TW15901]
gi|425279761|ref|ZP_18670985.1| shikimate kinase I [Escherichia coli ARS4.2123]
gi|425285165|ref|ZP_18676192.1| shikimate kinase I [Escherichia coli TW00353]
gi|425290536|ref|ZP_18681355.1| shikimate kinase I [Escherichia coli 3006]
gi|425296710|ref|ZP_18686870.1| shikimate kinase I [Escherichia coli PA38]
gi|425302234|ref|ZP_18692115.1| shikimate kinase I [Escherichia coli 07798]
gi|425307175|ref|ZP_18696851.1| shikimate kinase I [Escherichia coli N1]
gi|425313402|ref|ZP_18702573.1| shikimate kinase I [Escherichia coli EC1735]
gi|425319379|ref|ZP_18708159.1| shikimate kinase I [Escherichia coli EC1736]
gi|425325480|ref|ZP_18713827.1| shikimate kinase I [Escherichia coli EC1737]
gi|425331845|ref|ZP_18719673.1| shikimate kinase I [Escherichia coli EC1846]
gi|425338022|ref|ZP_18725370.1| shikimate kinase I [Escherichia coli EC1847]
gi|425344335|ref|ZP_18731217.1| shikimate kinase I [Escherichia coli EC1848]
gi|425350136|ref|ZP_18736595.1| shikimate kinase I [Escherichia coli EC1849]
gi|425356443|ref|ZP_18742502.1| shikimate kinase I [Escherichia coli EC1850]
gi|425362406|ref|ZP_18748044.1| shikimate kinase I [Escherichia coli EC1856]
gi|425368620|ref|ZP_18753735.1| shikimate kinase I [Escherichia coli EC1862]
gi|425374939|ref|ZP_18759572.1| shikimate kinase I [Escherichia coli EC1864]
gi|425381660|ref|ZP_18765654.1| shikimate kinase I [Escherichia coli EC1865]
gi|425387826|ref|ZP_18771377.1| shikimate kinase I [Escherichia coli EC1866]
gi|425394478|ref|ZP_18777579.1| shikimate kinase I [Escherichia coli EC1868]
gi|425400617|ref|ZP_18783314.1| shikimate kinase I [Escherichia coli EC1869]
gi|425406706|ref|ZP_18788920.1| shikimate kinase I [Escherichia coli EC1870]
gi|425413091|ref|ZP_18794846.1| shikimate kinase I [Escherichia coli NE098]
gi|425419402|ref|ZP_18800664.1| shikimate kinase I [Escherichia coli FRIK523]
gi|425424257|ref|ZP_18805411.1| shikimate kinase I [Escherichia coli 0.1288]
gi|425430679|ref|ZP_18811280.1| shikimate kinase I [Escherichia coli 0.1304]
gi|428949110|ref|ZP_19021378.1| shikimate kinase 1 [Escherichia coli 88.1467]
gi|428955184|ref|ZP_19026971.1| shikimate kinase 1 [Escherichia coli 88.1042]
gi|428961137|ref|ZP_19032425.1| shikimate kinase 1 [Escherichia coli 89.0511]
gi|428967792|ref|ZP_19038496.1| shikimate kinase 1 [Escherichia coli 90.0091]
gi|428980002|ref|ZP_19049810.1| shikimate kinase 1 [Escherichia coli 90.2281]
gi|428985810|ref|ZP_19055194.1| shikimate kinase 1 [Escherichia coli 93.0055]
gi|428991903|ref|ZP_19060883.1| shikimate kinase 1 [Escherichia coli 93.0056]
gi|428997791|ref|ZP_19066377.1| shikimate kinase 1 [Escherichia coli 94.0618]
gi|429004069|ref|ZP_19072158.1| shikimate kinase 1 [Escherichia coli 95.0183]
gi|429010124|ref|ZP_19077572.1| shikimate kinase 1 [Escherichia coli 95.1288]
gi|429016679|ref|ZP_19083553.1| shikimate kinase 1 [Escherichia coli 95.0943]
gi|429022533|ref|ZP_19089046.1| shikimate kinase 1 [Escherichia coli 96.0428]
gi|429028583|ref|ZP_19094568.1| shikimate kinase 1 [Escherichia coli 96.0427]
gi|429034752|ref|ZP_19100267.1| shikimate kinase 1 [Escherichia coli 96.0939]
gi|429040839|ref|ZP_19105932.1| shikimate kinase 1 [Escherichia coli 96.0932]
gi|429046682|ref|ZP_19111387.1| shikimate kinase 1 [Escherichia coli 96.0107]
gi|429052060|ref|ZP_19116621.1| shikimate kinase 1 [Escherichia coli 97.0003]
gi|429057560|ref|ZP_19121837.1| shikimate kinase 1 [Escherichia coli 97.1742]
gi|429063059|ref|ZP_19127042.1| shikimate kinase 1 [Escherichia coli 97.0007]
gi|429069295|ref|ZP_19132743.1| shikimate kinase 1 [Escherichia coli 99.0672]
gi|429075188|ref|ZP_19138434.1| shikimate kinase I [Escherichia coli 99.0678]
gi|429080400|ref|ZP_19143529.1| shikimate kinase 1 [Escherichia coli 99.0713]
gi|429721033|ref|ZP_19255954.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-9450]
gi|429772930|ref|ZP_19304948.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02030]
gi|429778296|ref|ZP_19310264.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02033-1]
gi|429786602|ref|ZP_19318495.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02092]
gi|429787546|ref|ZP_19319436.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02093]
gi|429793342|ref|ZP_19325188.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02281]
gi|429799922|ref|ZP_19331715.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02318]
gi|429803537|ref|ZP_19335295.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02913]
gi|429808178|ref|ZP_19339898.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-03439]
gi|429813878|ref|ZP_19345554.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-04080]
gi|429819088|ref|ZP_19350720.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-03943]
gi|429828483|ref|ZP_19359496.1| shikimate kinase 1 [Escherichia coli 96.0109]
gi|429834918|ref|ZP_19365213.1| shikimate kinase 1 [Escherichia coli 97.0010]
gi|429905437|ref|ZP_19371413.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-9990]
gi|429909574|ref|ZP_19375536.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-9941]
gi|429915444|ref|ZP_19381390.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-4984]
gi|429920491|ref|ZP_19386418.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-5604]
gi|429926295|ref|ZP_19392206.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-4986]
gi|429930230|ref|ZP_19396130.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-4987]
gi|429936768|ref|ZP_19402653.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-4988]
gi|429942450|ref|ZP_19408322.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-5603]
gi|429945133|ref|ZP_19410993.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-6006]
gi|429952688|ref|ZP_19418533.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec12-0465]
gi|429956043|ref|ZP_19421873.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec12-0466]
gi|432355365|ref|ZP_19598632.1| shikimate kinase 1 [Escherichia coli KTE2]
gi|432359834|ref|ZP_19603047.1| shikimate kinase 1 [Escherichia coli KTE4]
gi|432364631|ref|ZP_19607786.1| shikimate kinase 1 [Escherichia coli KTE5]
gi|432366837|ref|ZP_19609954.1| shikimate kinase 1 [Escherichia coli KTE10]
gi|432378551|ref|ZP_19621534.1| shikimate kinase 1 [Escherichia coli KTE12]
gi|432389139|ref|ZP_19632019.1| shikimate kinase 1 [Escherichia coli KTE16]
gi|432393964|ref|ZP_19636786.1| shikimate kinase 1 [Escherichia coli KTE21]
gi|432399332|ref|ZP_19642106.1| shikimate kinase 1 [Escherichia coli KTE25]
gi|432403740|ref|ZP_19646484.1| shikimate kinase 1 [Escherichia coli KTE26]
gi|432408457|ref|ZP_19651160.1| shikimate kinase 1 [Escherichia coli KTE28]
gi|432413607|ref|ZP_19656261.1| shikimate kinase 1 [Escherichia coli KTE39]
gi|432418912|ref|ZP_19661505.1| shikimate kinase 1 [Escherichia coli KTE44]
gi|432423791|ref|ZP_19666329.1| shikimate kinase 1 [Escherichia coli KTE178]
gi|432428001|ref|ZP_19670484.1| shikimate kinase 1 [Escherichia coli KTE181]
gi|432433598|ref|ZP_19676022.1| shikimate kinase 1 [Escherichia coli KTE187]
gi|432438194|ref|ZP_19680577.1| shikimate kinase 1 [Escherichia coli KTE188]
gi|432442871|ref|ZP_19685206.1| shikimate kinase 1 [Escherichia coli KTE189]
gi|432447990|ref|ZP_19690286.1| shikimate kinase 1 [Escherichia coli KTE191]
gi|432451603|ref|ZP_19693860.1| shikimate kinase 1 [Escherichia coli KTE193]
gi|432458506|ref|ZP_19700682.1| shikimate kinase 1 [Escherichia coli KTE201]
gi|432462705|ref|ZP_19704838.1| shikimate kinase 1 [Escherichia coli KTE204]
gi|432467697|ref|ZP_19709775.1| shikimate kinase 1 [Escherichia coli KTE205]
gi|432472733|ref|ZP_19714770.1| shikimate kinase 1 [Escherichia coli KTE206]
gi|432477697|ref|ZP_19719686.1| shikimate kinase 1 [Escherichia coli KTE208]
gi|432482692|ref|ZP_19724642.1| shikimate kinase 1 [Escherichia coli KTE210]
gi|432487147|ref|ZP_19729055.1| shikimate kinase 1 [Escherichia coli KTE212]
gi|432491146|ref|ZP_19733009.1| shikimate kinase 1 [Escherichia coli KTE213]
gi|432497499|ref|ZP_19739291.1| shikimate kinase 1 [Escherichia coli KTE214]
gi|432501940|ref|ZP_19743691.1| shikimate kinase 1 [Escherichia coli KTE216]
gi|432506257|ref|ZP_19747976.1| shikimate kinase 1 [Escherichia coli KTE220]
gi|432515776|ref|ZP_19752991.1| shikimate kinase 1 [Escherichia coli KTE224]
gi|432519559|ref|ZP_19756738.1| shikimate kinase 1 [Escherichia coli KTE228]
gi|432525712|ref|ZP_19762830.1| shikimate kinase 1 [Escherichia coli KTE230]
gi|432528244|ref|ZP_19765320.1| shikimate kinase 1 [Escherichia coli KTE233]
gi|432535755|ref|ZP_19772714.1| shikimate kinase 1 [Escherichia coli KTE234]
gi|432539717|ref|ZP_19776610.1| shikimate kinase 1 [Escherichia coli KTE235]
gi|432545102|ref|ZP_19781936.1| shikimate kinase 1 [Escherichia coli KTE236]
gi|432550584|ref|ZP_19787343.1| shikimate kinase 1 [Escherichia coli KTE237]
gi|432555470|ref|ZP_19792188.1| shikimate kinase 1 [Escherichia coli KTE47]
gi|432560653|ref|ZP_19797308.1| shikimate kinase 1 [Escherichia coli KTE49]
gi|432565756|ref|ZP_19802316.1| shikimate kinase 1 [Escherichia coli KTE51]
gi|432570613|ref|ZP_19807119.1| shikimate kinase 1 [Escherichia coli KTE53]
gi|432575618|ref|ZP_19812089.1| shikimate kinase 1 [Escherichia coli KTE55]
gi|432577617|ref|ZP_19814066.1| shikimate kinase 1 [Escherichia coli KTE56]
gi|432584911|ref|ZP_19821302.1| shikimate kinase 1 [Escherichia coli KTE57]
gi|432589763|ref|ZP_19826115.1| shikimate kinase 1 [Escherichia coli KTE58]
gi|432594579|ref|ZP_19830891.1| shikimate kinase 1 [Escherichia coli KTE60]
gi|432599632|ref|ZP_19835902.1| shikimate kinase 1 [Escherichia coli KTE62]
gi|432604210|ref|ZP_19840440.1| shikimate kinase 1 [Escherichia coli KTE66]
gi|432609419|ref|ZP_19845600.1| shikimate kinase 1 [Escherichia coli KTE67]
gi|432613391|ref|ZP_19849548.1| shikimate kinase 1 [Escherichia coli KTE72]
gi|432618622|ref|ZP_19854726.1| shikimate kinase 1 [Escherichia coli KTE75]
gi|432623727|ref|ZP_19859744.1| shikimate kinase 1 [Escherichia coli KTE76]
gi|432629018|ref|ZP_19864986.1| shikimate kinase 1 [Escherichia coli KTE77]
gi|432633237|ref|ZP_19869157.1| shikimate kinase 1 [Escherichia coli KTE80]
gi|432638595|ref|ZP_19874460.1| shikimate kinase 1 [Escherichia coli KTE81]
gi|432642927|ref|ZP_19878752.1| shikimate kinase 1 [Escherichia coli KTE83]
gi|432648058|ref|ZP_19883843.1| shikimate kinase 1 [Escherichia coli KTE86]
gi|432652978|ref|ZP_19888723.1| shikimate kinase 1 [Escherichia coli KTE87]
gi|432657623|ref|ZP_19893319.1| shikimate kinase 1 [Escherichia coli KTE93]
gi|432662596|ref|ZP_19898230.1| shikimate kinase 1 [Escherichia coli KTE111]
gi|432667924|ref|ZP_19903496.1| shikimate kinase 1 [Escherichia coli KTE116]
gi|432672474|ref|ZP_19907997.1| shikimate kinase 1 [Escherichia coli KTE119]
gi|432676493|ref|ZP_19911941.1| shikimate kinase 1 [Escherichia coli KTE142]
gi|432682103|ref|ZP_19917461.1| shikimate kinase 1 [Escherichia coli KTE143]
gi|432687206|ref|ZP_19922496.1| shikimate kinase 1 [Escherichia coli KTE156]
gi|432688660|ref|ZP_19923930.1| shikimate kinase 1 [Escherichia coli KTE161]
gi|432696250|ref|ZP_19931442.1| shikimate kinase 1 [Escherichia coli KTE162]
gi|432700902|ref|ZP_19936046.1| shikimate kinase 1 [Escherichia coli KTE169]
gi|432706124|ref|ZP_19941219.1| shikimate kinase 1 [Escherichia coli KTE171]
gi|432707727|ref|ZP_19942803.1| shikimate kinase 1 [Escherichia coli KTE6]
gi|432715238|ref|ZP_19950264.1| shikimate kinase 1 [Escherichia coli KTE8]
gi|432720507|ref|ZP_19955471.1| shikimate kinase 1 [Escherichia coli KTE9]
gi|432724850|ref|ZP_19959763.1| shikimate kinase 1 [Escherichia coli KTE17]
gi|432729433|ref|ZP_19964307.1| shikimate kinase 1 [Escherichia coli KTE18]
gi|432734136|ref|ZP_19968960.1| shikimate kinase 1 [Escherichia coli KTE45]
gi|432738886|ref|ZP_19973620.1| shikimate kinase 1 [Escherichia coli KTE42]
gi|432743120|ref|ZP_19977834.1| shikimate kinase 1 [Escherichia coli KTE23]
gi|432747364|ref|ZP_19982025.1| shikimate kinase 1 [Escherichia coli KTE43]
gi|432751837|ref|ZP_19986416.1| shikimate kinase 1 [Escherichia coli KTE29]
gi|432756313|ref|ZP_19990857.1| shikimate kinase 1 [Escherichia coli KTE22]
gi|432761221|ref|ZP_19995711.1| shikimate kinase 1 [Escherichia coli KTE46]
gi|432766770|ref|ZP_20001185.1| shikimate kinase 1 [Escherichia coli KTE48]
gi|432767735|ref|ZP_20002128.1| shikimate kinase 1 [Escherichia coli KTE50]
gi|432772118|ref|ZP_20006432.1| shikimate kinase 1 [Escherichia coli KTE54]
gi|432780393|ref|ZP_20014613.1| shikimate kinase 1 [Escherichia coli KTE59]
gi|432785351|ref|ZP_20019528.1| shikimate kinase 1 [Escherichia coli KTE63]
gi|432789386|ref|ZP_20023513.1| shikimate kinase 1 [Escherichia coli KTE65]
gi|432794583|ref|ZP_20028664.1| shikimate kinase 1 [Escherichia coli KTE78]
gi|432796099|ref|ZP_20030139.1| shikimate kinase 1 [Escherichia coli KTE79]
gi|432803553|ref|ZP_20037505.1| shikimate kinase 1 [Escherichia coli KTE84]
gi|432807620|ref|ZP_20041534.1| shikimate kinase 1 [Escherichia coli KTE91]
gi|432811098|ref|ZP_20044955.1| shikimate kinase 1 [Escherichia coli KTE101]
gi|432817133|ref|ZP_20050893.1| shikimate kinase 1 [Escherichia coli KTE115]
gi|432822821|ref|ZP_20056509.1| shikimate kinase 1 [Escherichia coli KTE118]
gi|432824275|ref|ZP_20057945.1| shikimate kinase 1 [Escherichia coli KTE123]
gi|432829001|ref|ZP_20062618.1| shikimate kinase 1 [Escherichia coli KTE135]
gi|432836325|ref|ZP_20069857.1| shikimate kinase 1 [Escherichia coli KTE136]
gi|432841173|ref|ZP_20074632.1| shikimate kinase 1 [Escherichia coli KTE140]
gi|432846465|ref|ZP_20079107.1| shikimate kinase 1 [Escherichia coli KTE141]
gi|432854790|ref|ZP_20083061.1| shikimate kinase 1 [Escherichia coli KTE144]
gi|432865433|ref|ZP_20088530.1| shikimate kinase 1 [Escherichia coli KTE146]
gi|432870876|ref|ZP_20091296.1| shikimate kinase 1 [Escherichia coli KTE147]
gi|432877453|ref|ZP_20095173.1| shikimate kinase 1 [Escherichia coli KTE154]
gi|432888703|ref|ZP_20102416.1| shikimate kinase 1 [Escherichia coli KTE158]
gi|432890831|ref|ZP_20103686.1| shikimate kinase 1 [Escherichia coli KTE165]
gi|432900650|ref|ZP_20111029.1| shikimate kinase 1 [Escherichia coli KTE192]
gi|432907090|ref|ZP_20115566.1| shikimate kinase 1 [Escherichia coli KTE194]
gi|432914942|ref|ZP_20120269.1| shikimate kinase 1 [Escherichia coli KTE190]
gi|432922517|ref|ZP_20125361.1| shikimate kinase 1 [Escherichia coli KTE173]
gi|432929247|ref|ZP_20130297.1| shikimate kinase 1 [Escherichia coli KTE175]
gi|432930742|ref|ZP_20131150.1| shikimate kinase 1 [Escherichia coli KTE184]
gi|432940195|ref|ZP_20138109.1| shikimate kinase 1 [Escherichia coli KTE183]
gi|432949566|ref|ZP_20144347.1| shikimate kinase 1 [Escherichia coli KTE196]
gi|432957241|ref|ZP_20148744.1| shikimate kinase 1 [Escherichia coli KTE197]
gi|432963892|ref|ZP_20153239.1| shikimate kinase 1 [Escherichia coli KTE202]
gi|432965147|ref|ZP_20154071.1| shikimate kinase 1 [Escherichia coli KTE203]
gi|432973661|ref|ZP_20162504.1| shikimate kinase 1 [Escherichia coli KTE207]
gi|432975586|ref|ZP_20164420.1| shikimate kinase 1 [Escherichia coli KTE209]
gi|432982829|ref|ZP_20171599.1| shikimate kinase 1 [Escherichia coli KTE211]
gi|432987233|ref|ZP_20175945.1| shikimate kinase 1 [Escherichia coli KTE215]
gi|432992484|ref|ZP_20181142.1| shikimate kinase 1 [Escherichia coli KTE217]
gi|432997146|ref|ZP_20185728.1| shikimate kinase 1 [Escherichia coli KTE218]
gi|433001743|ref|ZP_20190261.1| shikimate kinase 1 [Escherichia coli KTE223]
gi|433006966|ref|ZP_20195389.1| shikimate kinase 1 [Escherichia coli KTE227]
gi|433009582|ref|ZP_20197994.1| shikimate kinase 1 [Escherichia coli KTE229]
gi|433015688|ref|ZP_20204021.1| shikimate kinase 1 [Escherichia coli KTE104]
gi|433020514|ref|ZP_20208658.1| shikimate kinase 1 [Escherichia coli KTE105]
gi|433025252|ref|ZP_20213224.1| shikimate kinase 1 [Escherichia coli KTE106]
gi|433030298|ref|ZP_20218147.1| shikimate kinase 1 [Escherichia coli KTE109]
gi|433035253|ref|ZP_20222950.1| shikimate kinase 1 [Escherichia coli KTE112]
gi|433040386|ref|ZP_20227976.1| shikimate kinase 1 [Escherichia coli KTE113]
gi|433044905|ref|ZP_20232390.1| shikimate kinase 1 [Escherichia coli KTE117]
gi|433049827|ref|ZP_20237160.1| shikimate kinase 1 [Escherichia coli KTE120]
gi|433054997|ref|ZP_20242162.1| shikimate kinase 1 [Escherichia coli KTE122]
gi|433059868|ref|ZP_20246903.1| shikimate kinase 1 [Escherichia coli KTE124]
gi|433064819|ref|ZP_20251728.1| shikimate kinase 1 [Escherichia coli KTE125]
gi|433069688|ref|ZP_20256460.1| shikimate kinase 1 [Escherichia coli KTE128]
gi|433074638|ref|ZP_20261278.1| shikimate kinase 1 [Escherichia coli KTE129]
gi|433079574|ref|ZP_20266092.1| shikimate kinase 1 [Escherichia coli KTE131]
gi|433084313|ref|ZP_20270759.1| shikimate kinase 1 [Escherichia coli KTE133]
gi|433089037|ref|ZP_20275401.1| shikimate kinase 1 [Escherichia coli KTE137]
gi|433093754|ref|ZP_20280009.1| shikimate kinase 1 [Escherichia coli KTE138]
gi|433098187|ref|ZP_20284361.1| shikimate kinase 1 [Escherichia coli KTE139]
gi|433102973|ref|ZP_20289044.1| shikimate kinase 1 [Escherichia coli KTE145]
gi|433107635|ref|ZP_20293598.1| shikimate kinase 1 [Escherichia coli KTE148]
gi|433112618|ref|ZP_20298472.1| shikimate kinase 1 [Escherichia coli KTE150]
gi|433117263|ref|ZP_20303047.1| shikimate kinase 1 [Escherichia coli KTE153]
gi|433121995|ref|ZP_20307653.1| shikimate kinase 1 [Escherichia coli KTE157]
gi|433126952|ref|ZP_20312497.1| shikimate kinase 1 [Escherichia coli KTE160]
gi|433131940|ref|ZP_20317368.1| shikimate kinase 1 [Escherichia coli KTE163]
gi|433136631|ref|ZP_20321961.1| shikimate kinase 1 [Escherichia coli KTE166]
gi|433141016|ref|ZP_20326260.1| shikimate kinase 1 [Escherichia coli KTE167]
gi|433145991|ref|ZP_20331123.1| shikimate kinase 1 [Escherichia coli KTE168]
gi|433151021|ref|ZP_20336020.1| shikimate kinase 1 [Escherichia coli KTE174]
gi|433155533|ref|ZP_20340464.1| shikimate kinase 1 [Escherichia coli KTE176]
gi|433160474|ref|ZP_20345299.1| shikimate kinase 1 [Escherichia coli KTE177]
gi|433165375|ref|ZP_20350104.1| shikimate kinase 1 [Escherichia coli KTE179]
gi|433170373|ref|ZP_20354992.1| shikimate kinase 1 [Escherichia coli KTE180]
gi|433175273|ref|ZP_20359784.1| shikimate kinase 1 [Escherichia coli KTE232]
gi|433180194|ref|ZP_20364578.1| shikimate kinase 1 [Escherichia coli KTE82]
gi|433185101|ref|ZP_20369337.1| shikimate kinase 1 [Escherichia coli KTE85]
gi|433190192|ref|ZP_20374279.1| shikimate kinase 1 [Escherichia coli KTE88]
gi|433195413|ref|ZP_20379388.1| shikimate kinase 1 [Escherichia coli KTE90]
gi|433200132|ref|ZP_20384018.1| shikimate kinase 1 [Escherichia coli KTE94]
gi|433205091|ref|ZP_20388840.1| shikimate kinase 1 [Escherichia coli KTE95]
gi|433209510|ref|ZP_20393176.1| shikimate kinase 1 [Escherichia coli KTE97]
gi|433214361|ref|ZP_20397942.1| shikimate kinase 1 [Escherichia coli KTE99]
gi|433324401|ref|ZP_20401697.1| shikimate kinase I [Escherichia coli J96]
gi|443619453|ref|YP_007383309.1| shikimate kinase I [Escherichia coli APEC O78]
gi|444926995|ref|ZP_21246265.1| shikimate kinase 1 [Escherichia coli 09BKT078844]
gi|444932634|ref|ZP_21251653.1| shikimate kinase 1 [Escherichia coli 99.0814]
gi|444938072|ref|ZP_21256825.1| shikimate kinase 1 [Escherichia coli 99.0815]
gi|444943684|ref|ZP_21262183.1| shikimate kinase 1 [Escherichia coli 99.0816]
gi|444949154|ref|ZP_21267452.1| shikimate kinase 1 [Escherichia coli 99.0839]
gi|444954823|ref|ZP_21272897.1| shikimate kinase 1 [Escherichia coli 99.0848]
gi|444960236|ref|ZP_21278069.1| shikimate kinase 1 [Escherichia coli 99.1753]
gi|444965538|ref|ZP_21283112.1| shikimate kinase 1 [Escherichia coli 99.1775]
gi|444971422|ref|ZP_21288767.1| shikimate kinase 1 [Escherichia coli 99.1793]
gi|444976715|ref|ZP_21293811.1| shikimate kinase 1 [Escherichia coli 99.1805]
gi|444982095|ref|ZP_21298997.1| shikimate kinase 1 [Escherichia coli ATCC 700728]
gi|444987594|ref|ZP_21304365.1| shikimate kinase 1 [Escherichia coli PA11]
gi|444992811|ref|ZP_21309448.1| shikimate kinase 1 [Escherichia coli PA19]
gi|444998048|ref|ZP_21314542.1| shikimate kinase 1 [Escherichia coli PA13]
gi|445003680|ref|ZP_21320063.1| shikimate kinase 1 [Escherichia coli PA2]
gi|445009053|ref|ZP_21325287.1| shikimate kinase 1 [Escherichia coli PA47]
gi|445014183|ref|ZP_21330282.1| shikimate kinase 1 [Escherichia coli PA48]
gi|445020093|ref|ZP_21336053.1| shikimate kinase 1 [Escherichia coli PA8]
gi|445025468|ref|ZP_21341285.1| shikimate kinase 1 [Escherichia coli 7.1982]
gi|445030926|ref|ZP_21346589.1| shikimate kinase 1 [Escherichia coli 99.1781]
gi|445036326|ref|ZP_21351848.1| shikimate kinase 1 [Escherichia coli 99.1762]
gi|445041946|ref|ZP_21357312.1| shikimate kinase 1 [Escherichia coli PA35]
gi|445047215|ref|ZP_21362458.1| shikimate kinase 1 [Escherichia coli 3.4880]
gi|445052748|ref|ZP_21367767.1| shikimate kinase 1 [Escherichia coli 95.0083]
gi|445060753|ref|ZP_21373272.1| shikimate kinase 1 [Escherichia coli 99.0670]
gi|450193824|ref|ZP_21892135.1| shikimate kinase I [Escherichia coli SEPT362]
gi|450223020|ref|ZP_21897079.1| shikimate kinase I [Escherichia coli O08]
gi|450251534|ref|ZP_21901859.1| shikimate kinase I [Escherichia coli S17]
gi|67462165|sp|P0A6D7.2|AROK_ECOLI RecName: Full=Shikimate kinase 1; Short=SK 1; AltName:
Full=Shikimate kinase I; Short=SKI
gi|67462166|sp|P0A6D8.2|AROK_ECOL6 RecName: Full=Shikimate kinase 1; Short=SK 1
gi|67462167|sp|P0A6D9.2|AROK_ECO57 RecName: Full=Shikimate kinase 1; Short=SK 1
gi|67462168|sp|P0A6E0.2|AROK_SHIFL RecName: Full=Shikimate kinase 1; Short=SK 1
gi|124053401|sp|Q31VP4.1|AROK_SHIBS RecName: Full=Shikimate kinase 1; Short=SK 1
gi|124053402|sp|Q32AK2.1|AROK_SHIDS RecName: Full=Shikimate kinase 1; Short=SK 1
gi|124053403|sp|Q3YWN3.1|AROK_SHISS RecName: Full=Shikimate kinase 1; Short=SK 1
gi|166988276|sp|A7ZSR5.1|AROK_ECO24 RecName: Full=Shikimate kinase 1; Short=SK 1
gi|166988277|sp|A8A5J7.1|AROK_ECOHS RecName: Full=Shikimate kinase 1; Short=SK 1
gi|189046330|sp|B1IP75.1|AROK_ECOLC RecName: Full=Shikimate kinase 1; Short=SK 1
gi|226729125|sp|B7MD01.1|AROK_ECO45 RecName: Full=Shikimate kinase 1; Short=SK 1
gi|226729126|sp|B7NMF3.1|AROK_ECO7I RecName: Full=Shikimate kinase 1; Short=SK 1
gi|226729127|sp|B7M1U2.1|AROK_ECO8A RecName: Full=Shikimate kinase 1; Short=SK 1
gi|226729128|sp|B7NDZ4.1|AROK_ECOLU RecName: Full=Shikimate kinase 1; Short=SK 1
gi|229515982|sp|B1X737.1|AROK_ECODH RecName: Full=Shikimate kinase 1; Short=SK 1
gi|238689506|sp|B2U3J6.1|AROK_SHIB3 RecName: Full=Shikimate kinase 1; Short=SK 1
gi|21465788|pdb|1KAG|A Chain A, Crystal Structure Of The Escherichia Coli Shikimate Kinase
I (Arok)
gi|21465789|pdb|1KAG|B Chain B, Crystal Structure Of The Escherichia Coli Shikimate Kinase
I (Arok)
gi|560829|emb|CAA56448.1| shikimate kinase [Escherichia coli K-12]
gi|662835|gb|AAB59099.1| shikimic acid kinase I [Escherichia coli]
gi|73857372|gb|AAZ90079.1| Shikimate kinase [Shigella sonnei Ss046]
gi|81242943|gb|ABB63653.1| Shikimate kinase [Shigella dysenteriae Sd197]
gi|81247156|gb|ABB67864.1| Shikimate kinase [Shigella boydii Sb227]
gi|85676651|dbj|BAE77901.1| shikimate kinase I [Escherichia coli str. K12 substr. W3110]
gi|87082255|gb|AAC76415.2| shikimate kinase I [Escherichia coli str. K-12 substr. MG1655]
gi|157068546|gb|ABV07801.1| shikimate kinase [Escherichia coli HS]
gi|157080466|gb|ABV20174.1| shikimate kinase [Escherichia coli E24377A]
gi|169753302|gb|ACA76001.1| Shikimate kinase [Escherichia coli ATCC 8739]
gi|169890742|gb|ACB04449.1| shikimate kinase I [Escherichia coli str. K-12 substr. DH10B]
gi|187428274|gb|ACD07548.1| shikimate kinase [Shigella boydii CDC 3083-94]
gi|188490808|gb|EDU65911.1| shikimate kinase [Escherichia coli 53638]
gi|208734858|gb|EDZ83545.1| shikimate kinase [Escherichia coli O157:H7 str. EC4045]
gi|215266743|emb|CAS11182.1| shikimate kinase I [Escherichia coli O127:H6 str. E2348/69]
gi|218353802|emb|CAV00139.1| shikimate kinase I [Escherichia coli 55989]
gi|218362703|emb|CAR00329.1| shikimate kinase I [Escherichia coli IAI1]
gi|218367216|emb|CAR04990.1| shikimate kinase I [Escherichia coli S88]
gi|218372119|emb|CAR19981.1| shikimate kinase I [Escherichia coli IAI39]
gi|218429230|emb|CAR10040.1| shikimate kinase I [Escherichia coli ED1a]
gi|218434077|emb|CAR14994.1| shikimate kinase I [Escherichia coli UMN026]
gi|222035092|emb|CAP77837.1| Shikimate kinase 1 [Escherichia coli LF82]
gi|238863547|gb|ACR65545.1| shikimate kinase I [Escherichia coli BW2952]
gi|242378916|emb|CAQ33711.1| shikimate kinase I [Escherichia coli BL21(DE3)]
gi|253975219|gb|ACT40890.1| shikimate kinase I [Escherichia coli B str. REL606]
gi|253979375|gb|ACT45045.1| shikimate kinase I [Escherichia coli BL21(DE3)]
gi|254594704|gb|ACT74065.1| shikimate kinase I [Escherichia coli O157:H7 str. TW14359]
gi|257756146|dbj|BAI27648.1| shikimate kinase I [Escherichia coli O26:H11 str. 11368]
gi|257761321|dbj|BAI32818.1| shikimate kinase I [Escherichia coli O103:H2 str. 12009]
gi|257766472|dbj|BAI37967.1| shikimate kinase I [Escherichia coli O111:H- str. 11128]
gi|281602738|gb|ADA75722.1| Shikimate kinase 1 [Shigella flexneri 2002017]
gi|284923382|emb|CBG36476.1| shikimate kinase I [Escherichia coli 042]
gi|294489758|gb|ADE88514.1| shikimate kinase [Escherichia coli IHE3034]
gi|306908092|gb|EFN38592.1| Shikimate kinase [Escherichia coli W]
gi|308926991|gb|EFP72467.1| shikimate kinase family protein [Shigella dysenteriae 1617]
gi|309703801|emb|CBJ03142.1| shikimate kinase I [Escherichia coli ETEC H10407]
gi|310334724|gb|EFQ00929.1| shikimate kinase family protein [Escherichia coli 1827-70]
gi|312287129|gb|EFR15039.1| shikimate kinase family protein [Escherichia coli 2362-75]
gi|313647314|gb|EFS11766.1| shikimate kinase family protein [Shigella flexneri 2a str. 2457T]
gi|315062667|gb|ADT76994.1| shikimate kinase I [Escherichia coli W]
gi|315137966|dbj|BAJ45125.1| shikimate kinase I [Escherichia coli DH1]
gi|315619009|gb|EFU99592.1| shikimate kinase family protein [Escherichia coli 3431]
gi|320175755|gb|EFW50841.1| Shikimate kinase I [Shigella dysenteriae CDC 74-1112]
gi|320181877|gb|EFW56783.1| Shikimate kinase I [Shigella boydii ATCC 9905]
gi|320186742|gb|EFW61465.1| Shikimate kinase I [Shigella flexneri CDC 796-83]
gi|320655673|gb|EFX23596.1| shikimate kinase I [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320666480|gb|EFX33463.1| shikimate kinase I [Escherichia coli O157:H7 str. LSU-61]
gi|323154219|gb|EFZ40422.1| shikimate kinase family protein [Escherichia coli EPECa14]
gi|323162774|gb|EFZ48611.1| shikimate kinase family protein [Escherichia coli E128010]
gi|323164949|gb|EFZ50740.1| shikimate kinase family protein [Shigella sonnei 53G]
gi|323174020|gb|EFZ59648.1| shikimate kinase family protein [Escherichia coli LT-68]
gi|323179086|gb|EFZ64660.1| shikimate kinase family protein [Escherichia coli OK1180]
gi|323182849|gb|EFZ68250.1| shikimate kinase family protein [Escherichia coli OK1357]
gi|323189025|gb|EFZ74309.1| shikimate kinase family protein [Escherichia coli RN587/1]
gi|323376745|gb|ADX49013.1| Shikimate kinase [Escherichia coli KO11FL]
gi|327251019|gb|EGE62712.1| shikimate kinase family protein [Escherichia coli STEC_7v]
gi|332085535|gb|EGI90701.1| shikimate kinase family protein [Shigella boydii 5216-82]
gi|332085997|gb|EGI91161.1| shikimate kinase family protein [Shigella dysenteriae 155-74]
gi|332090520|gb|EGI95618.1| shikimate kinase family protein [Shigella boydii 3594-74]
gi|332345341|gb|AEE58675.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332749512|gb|EGJ79929.1| shikimate kinase family protein [Shigella flexneri K-671]
gi|332750776|gb|EGJ81183.1| shikimate kinase family protein [Shigella flexneri 2747-71]
gi|332763628|gb|EGJ93867.1| shikimate kinase family protein [Shigella flexneri 2930-71]
gi|332996665|gb|EGK16290.1| shikimate kinase family protein [Shigella flexneri K-272]
gi|332997038|gb|EGK16654.1| shikimate kinase family protein [Shigella flexneri K-218]
gi|333012463|gb|EGK31844.1| shikimate kinase family protein [Shigella flexneri K-304]
gi|333013072|gb|EGK32448.1| shikimate kinase family protein [Shigella flexneri K-227]
gi|335573177|gb|EGM59540.1| shikimate kinase family protein [Shigella flexneri J1713]
gi|339417115|gb|AEJ58787.1| shikimate kinase family protein [Escherichia coli UMNF18]
gi|340732906|gb|EGR62042.1| shikimate kinase I [Escherichia coli O104:H4 str. 01-09591]
gi|340738477|gb|EGR72726.1| shikimate kinase I [Escherichia coli O104:H4 str. LB226692]
gi|342363127|gb|EGU27238.1| shikimate kinase I [Escherichia coli XH140A]
gi|344193310|gb|EGV47392.1| shikimate kinase I [Escherichia coli XH001]
gi|345332546|gb|EGW65002.1| shikimate kinase family protein [Escherichia coli STEC_C165-02]
gi|345333368|gb|EGW65819.1| shikimate kinase family protein [Escherichia coli 2534-86]
gi|345334764|gb|EGW67205.1| shikimate kinase family protein [Escherichia coli STEC_B2F1]
gi|345347622|gb|EGW79926.1| shikimate kinase family protein [Escherichia coli STEC_94C]
gi|345349362|gb|EGW81647.1| shikimate kinase family protein [Escherichia coli 3030-1]
gi|345355050|gb|EGW87263.1| shikimate kinase family protein [Escherichia coli STEC_DG131-3]
gi|345359378|gb|EGW91555.1| shikimate kinase family protein [Escherichia coli STEC_EH250]
gi|345370049|gb|EGX02027.1| shikimate kinase family protein [Escherichia coli STEC_MHI813]
gi|345371292|gb|EGX03263.1| shikimate kinase family protein [Escherichia coli G58-1]
gi|345373520|gb|EGX05479.1| shikimate kinase family protein [Escherichia coli STEC_H.1.8]
gi|345385370|gb|EGX15215.1| shikimate kinase family protein [Escherichia coli STEC_S1191]
gi|345391318|gb|EGX21111.1| shikimate kinase family protein [Escherichia coli TX1999]
gi|354858702|gb|EHF19151.1| shikimate kinase 1 [Escherichia coli O104:H4 str. C236-11]
gi|354863156|gb|EHF23590.1| shikimate kinase 1 [Escherichia coli O104:H4 str. C227-11]
gi|354864046|gb|EHF24476.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 04-8351]
gi|354871191|gb|EHF31589.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 09-7901]
gi|354877729|gb|EHF38087.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-3677]
gi|354886630|gb|EHF46912.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4404]
gi|354890522|gb|EHF50761.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4522]
gi|354894843|gb|EHF55033.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4623]
gi|354906648|gb|EHF66722.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354909291|gb|EHF69324.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354911276|gb|EHF71281.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354914049|gb|EHF74034.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C4]
gi|354921727|gb|EHF81648.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C5]
gi|355422166|gb|AER86363.1| shikimate kinase I [Escherichia coli str. 'clone D i2']
gi|355427086|gb|AER91282.1| shikimate kinase I [Escherichia coli str. 'clone D i14']
gi|359333557|dbj|BAL40004.1| shikimate kinase I [Escherichia coli str. K-12 substr. MDS42]
gi|371593448|gb|EHN82329.1| shikimate kinase 1 [Escherichia coli H494]
gi|371596018|gb|EHN84861.1| shikimate kinase 1 [Escherichia coli TA124]
gi|371604495|gb|EHN93123.1| shikimate kinase 1 [Escherichia coli E101]
gi|371604646|gb|EHN93273.1| shikimate kinase 1 [Escherichia coli H397]
gi|371605109|gb|EHN93729.1| shikimate kinase 1 [Escherichia coli B093]
gi|374360753|gb|AEZ42460.1| shikimate kinase I [Escherichia coli O55:H7 str. RM12579]
gi|375322081|gb|EHS67862.1| shikimate kinase I [Escherichia coli O157:H43 str. T22]
gi|377840278|gb|EHU05353.1| shikimate kinase family protein [Escherichia coli DEC1A]
gi|377840539|gb|EHU05611.1| shikimate kinase family protein [Escherichia coli DEC1C]
gi|377843095|gb|EHU08136.1| shikimate kinase family protein [Escherichia coli DEC1B]
gi|377853757|gb|EHU18648.1| shikimate kinase 1 [Escherichia coli DEC1D]
gi|377857178|gb|EHU22032.1| shikimate kinase family protein [Escherichia coli DEC1E]
gi|377859823|gb|EHU24651.1| shikimate kinase 1 [Escherichia coli DEC2A]
gi|377871365|gb|EHU36029.1| shikimate kinase family protein [Escherichia coli DEC2B]
gi|377873659|gb|EHU38291.1| shikimate kinase family protein [Escherichia coli DEC2C]
gi|377875534|gb|EHU40144.1| shikimate kinase family protein [Escherichia coli DEC2D]
gi|377886864|gb|EHU51343.1| shikimate kinase family protein [Escherichia coli DEC2E]
gi|377890197|gb|EHU54655.1| shikimate kinase family protein [Escherichia coli DEC3A]
gi|377891985|gb|EHU56437.1| shikimate kinase family protein [Escherichia coli DEC3B]
gi|377903017|gb|EHU67315.1| shikimate kinase family protein [Escherichia coli DEC3C]
gi|377907134|gb|EHU71370.1| shikimate kinase family protein [Escherichia coli DEC3D]
gi|377918464|gb|EHU82512.1| shikimate kinase family protein [Escherichia coli DEC3F]
gi|377924004|gb|EHU87960.1| shikimate kinase family protein [Escherichia coli DEC4A]
gi|377927503|gb|EHU91418.1| shikimate kinase family protein [Escherichia coli DEC4B]
gi|377938458|gb|EHV02225.1| shikimate kinase family protein [Escherichia coli DEC4D]
gi|377939451|gb|EHV03206.1| shikimate kinase family protein [Escherichia coli DEC4C]
gi|377945020|gb|EHV08718.1| shikimate kinase family protein [Escherichia coli DEC4E]
gi|377954387|gb|EHV17946.1| shikimate kinase family protein [Escherichia coli DEC4F]
gi|377957965|gb|EHV21489.1| shikimate kinase family protein [Escherichia coli DEC5A]
gi|377962690|gb|EHV26142.1| shikimate kinase family protein [Escherichia coli DEC5B]
gi|377970900|gb|EHV34258.1| shikimate kinase family protein [Escherichia coli DEC5C]
gi|377972197|gb|EHV35547.1| shikimate kinase family protein [Escherichia coli DEC5D]
gi|377980755|gb|EHV44015.1| shikimate kinase 1 [Escherichia coli DEC5E]
gi|377989819|gb|EHV52985.1| shikimate kinase family protein [Escherichia coli DEC6B]
gi|377990718|gb|EHV53876.1| shikimate kinase 1 [Escherichia coli DEC6A]
gi|377993539|gb|EHV56671.1| shikimate kinase 1 [Escherichia coli DEC6C]
gi|378004750|gb|EHV67761.1| shikimate kinase 1 [Escherichia coli DEC6D]
gi|378006997|gb|EHV69967.1| shikimate kinase family protein [Escherichia coli DEC6E]
gi|378021559|gb|EHV84261.1| shikimate kinase family protein [Escherichia coli DEC7C]
gi|378025101|gb|EHV87748.1| shikimate kinase family protein [Escherichia coli DEC7D]
gi|378029839|gb|EHV92444.1| shikimate kinase family protein [Escherichia coli DEC7B]
gi|378035914|gb|EHV98466.1| shikimate kinase 1 [Escherichia coli DEC7E]
gi|378044044|gb|EHW06466.1| shikimate kinase 1 [Escherichia coli DEC8A]
gi|378044894|gb|EHW07304.1| shikimate kinase family protein [Escherichia coli DEC8B]
gi|378049628|gb|EHW11966.1| shikimate kinase family protein [Escherichia coli DEC8C]
gi|378058623|gb|EHW20831.1| shikimate kinase family protein [Escherichia coli DEC8D]
gi|378061968|gb|EHW24147.1| shikimate kinase family protein [Escherichia coli DEC8E]
gi|378074458|gb|EHW36495.1| shikimate kinase family protein [Escherichia coli DEC9B]
gi|378080349|gb|EHW42312.1| shikimate kinase family protein [Escherichia coli DEC9C]
gi|378087430|gb|EHW49290.1| shikimate kinase family protein [Escherichia coli DEC9D]
gi|378090688|gb|EHW52524.1| shikimate kinase family protein [Escherichia coli DEC9E]
gi|378097556|gb|EHW59308.1| shikimate kinase family protein [Escherichia coli DEC10A]
gi|378102806|gb|EHW64478.1| shikimate kinase family protein [Escherichia coli DEC10B]
gi|378107624|gb|EHW69243.1| shikimate kinase family protein [Escherichia coli DEC10C]
gi|378112381|gb|EHW73960.1| shikimate kinase family protein [Escherichia coli DEC10D]
gi|378124928|gb|EHW86331.1| shikimate kinase family protein [Escherichia coli DEC10E]
gi|378125951|gb|EHW87348.1| shikimate kinase family protein [Escherichia coli DEC11A]
gi|378126261|gb|EHW87656.1| shikimate kinase family protein [Escherichia coli DEC10F]
gi|378139076|gb|EHX00325.1| shikimate kinase family protein [Escherichia coli DEC11B]
gi|378145478|gb|EHX06642.1| shikimate kinase 1 [Escherichia coli DEC11D]
gi|378146942|gb|EHX08091.1| shikimate kinase 1 [Escherichia coli DEC11C]
gi|378155329|gb|EHX16388.1| shikimate kinase 1 [Escherichia coli DEC11E]
gi|378162429|gb|EHX23393.1| shikimate kinase family protein [Escherichia coli DEC12B]
gi|378166245|gb|EHX27171.1| shikimate kinase 1 [Escherichia coli DEC12A]
gi|378166964|gb|EHX27882.1| shikimate kinase 1 [Escherichia coli DEC12C]
gi|378179740|gb|EHX40448.1| shikimate kinase family protein [Escherichia coli DEC12D]
gi|378183534|gb|EHX44176.1| shikimate kinase family protein [Escherichia coli DEC12E]
gi|378196547|gb|EHX57033.1| shikimate kinase family protein [Escherichia coli DEC13C]
gi|378197430|gb|EHX57911.1| shikimate kinase family protein [Escherichia coli DEC13B]
gi|378210124|gb|EHX70491.1| shikimate kinase family protein [Escherichia coli DEC13E]
gi|378213584|gb|EHX73896.1| shikimate kinase 1 [Escherichia coli DEC14A]
gi|378216155|gb|EHX76443.1| shikimate kinase family protein [Escherichia coli DEC14B]
gi|378224720|gb|EHX84921.1| shikimate kinase family protein [Escherichia coli DEC14C]
gi|378228637|gb|EHX88788.1| shikimate kinase family protein [Escherichia coli DEC14D]
gi|378235189|gb|EHX95261.1| shikimate kinase family protein [Escherichia coli DEC15A]
gi|378240527|gb|EHY00497.1| shikimate kinase family protein [Escherichia coli DEC15B]
gi|378244211|gb|EHY04155.1| shikimate kinase family protein [Escherichia coli DEC15C]
gi|378252517|gb|EHY12406.1| shikimate kinase family protein [Escherichia coli DEC15D]
gi|380346500|gb|EIA34793.1| shikimate kinase I [Escherichia coli SCI-07]
gi|383391197|gb|AFH16155.1| shikimate kinase I [Escherichia coli KO11FL]
gi|383406961|gb|AFH13204.1| shikimate kinase I [Escherichia coli W]
gi|383468659|gb|EID63680.1| shikimate kinase I [Shigella flexneri 5a str. M90T]
gi|384380981|gb|EIE38844.1| shikimate kinase I [Escherichia coli J53]
gi|384470068|gb|EIE54194.1| shikimate kinase I [Escherichia coli AI27]
gi|385155475|gb|EIF17478.1| shikimate kinase I [Escherichia coli O32:H37 str. P4]
gi|385537956|gb|EIF84823.1| shikimate kinase 1 [Escherichia coli M919]
gi|385709296|gb|EIG46294.1| shikimate kinase 1 [Escherichia coli B799]
gi|385709626|gb|EIG46623.1| shikimate kinase 1 [Escherichia coli H730]
gi|386797997|gb|AFJ31031.1| shikimate kinase I [Escherichia coli Xuzhou21]
gi|388337443|gb|EIL03944.1| shikimate kinase I [Escherichia coli O103:H2 str. CVM9450]
gi|388340453|gb|EIL06689.1| shikimate kinase I [Escherichia coli O111:H11 str. CVM9534]
gi|388341228|gb|EIL07371.1| shikimate kinase I [Escherichia coli O103:H25 str. CVM9340]
gi|388357338|gb|EIL21916.1| shikimate kinase I [Escherichia coli O111:H8 str. CVM9574]
gi|388361077|gb|EIL25220.1| shikimate kinase I [Escherichia coli O111:H8 str. CVM9570]
gi|388365108|gb|EIL28917.1| shikimate kinase I [Escherichia coli O111:H11 str. CVM9545]
gi|388373708|gb|EIL36950.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM9942]
gi|388377943|gb|EIL40723.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM10026]
gi|390638609|gb|EIN18112.1| shikimate kinase I [Escherichia coli FRIK1996]
gi|390640062|gb|EIN19527.1| shikimate kinase I [Escherichia coli FDA517]
gi|390640394|gb|EIN19853.1| shikimate kinase I [Escherichia coli FDA505]
gi|390657942|gb|EIN35749.1| shikimate kinase I [Escherichia coli 93-001]
gi|390661120|gb|EIN38791.1| shikimate kinase I [Escherichia coli FRIK1990]
gi|390675004|gb|EIN51168.1| shikimate kinase I [Escherichia coli PA3]
gi|390678476|gb|EIN54438.1| shikimate kinase I [Escherichia coli PA5]
gi|390681823|gb|EIN57607.1| shikimate kinase I [Escherichia coli PA9]
gi|390693475|gb|EIN68108.1| shikimate kinase I [Escherichia coli PA10]
gi|390697909|gb|EIN72306.1| shikimate kinase I [Escherichia coli PA14]
gi|390698475|gb|EIN72854.1| shikimate kinase I [Escherichia coli PA15]
gi|390719205|gb|EIN91939.1| shikimate kinase I [Escherichia coli PA25]
gi|390720783|gb|EIN93489.1| shikimate kinase I [Escherichia coli PA24]
gi|390725057|gb|EIN97577.1| shikimate kinase I [Escherichia coli PA28]
gi|390738775|gb|EIO09979.1| shikimate kinase I [Escherichia coli PA31]
gi|390739439|gb|EIO10616.1| shikimate kinase I [Escherichia coli PA32]
gi|390742660|gb|EIO13656.1| shikimate kinase I [Escherichia coli PA33]
gi|390756279|gb|EIO25790.1| shikimate kinase I [Escherichia coli PA40]
gi|390762983|gb|EIO32234.1| shikimate kinase I [Escherichia coli PA39]
gi|390764474|gb|EIO33682.1| shikimate kinase I [Escherichia coli PA41]
gi|390766286|gb|EIO35419.1| shikimate kinase I [Escherichia coli PA42]
gi|390779875|gb|EIO47589.1| shikimate kinase I [Escherichia coli TW06591]
gi|390786984|gb|EIO54482.1| shikimate kinase I [Escherichia coli TW07945]
gi|390787935|gb|EIO55408.1| shikimate kinase I [Escherichia coli TW10246]
gi|390793843|gb|EIO61170.1| shikimate kinase I [Escherichia coli TW11039]
gi|390802092|gb|EIO69141.1| shikimate kinase I [Escherichia coli TW09098]
gi|390804739|gb|EIO71687.1| shikimate kinase I [Escherichia coli TW09109]
gi|390814074|gb|EIO80654.1| shikimate kinase I [Escherichia coli TW10119]
gi|390823577|gb|EIO89626.1| shikimate kinase I [Escherichia coli EC4203]
gi|390825220|gb|EIO91158.1| shikimate kinase I [Escherichia coli TW09195]
gi|390828429|gb|EIO94095.1| shikimate kinase I [Escherichia coli EC4196]
gi|390842795|gb|EIP06631.1| shikimate kinase I [Escherichia coli TW14313]
gi|390843868|gb|EIP07643.1| shikimate kinase I [Escherichia coli TW14301]
gi|390848595|gb|EIP12065.1| shikimate kinase I [Escherichia coli EC4421]
gi|390858857|gb|EIP21225.1| shikimate kinase I [Escherichia coli EC4422]
gi|390863238|gb|EIP25379.1| shikimate kinase I [Escherichia coli EC4013]
gi|390867817|gb|EIP29589.1| shikimate kinase I [Escherichia coli EC4402]
gi|390876041|gb|EIP37036.1| shikimate kinase I [Escherichia coli EC4439]
gi|390881477|gb|EIP42067.1| shikimate kinase I [Escherichia coli EC4436]
gi|390891273|gb|EIP50910.1| shikimate kinase I [Escherichia coli EC4437]
gi|390893384|gb|EIP52946.1| shikimate kinase I [Escherichia coli EC4448]
gi|390898500|gb|EIP57773.1| shikimate kinase I [Escherichia coli EC1738]
gi|390906434|gb|EIP65325.1| shikimate kinase I [Escherichia coli EC1734]
gi|390916537|gb|EIP74989.1| shikimate kinase I [Escherichia coli EC1863]
gi|390917464|gb|EIP75887.1| shikimate kinase I [Escherichia coli EC1845]
gi|391244132|gb|EIQ03419.1| shikimate kinase 1 [Shigella flexneri 2850-71]
gi|391244631|gb|EIQ03913.1| shikimate kinase 1 [Shigella flexneri CCH060]
gi|391257615|gb|EIQ16727.1| shikimate kinase 1 [Shigella flexneri K-315]
gi|391261253|gb|EIQ20302.1| shikimate kinase 1 [Shigella flexneri K-404]
gi|391266459|gb|EIQ25409.1| shikimate kinase 1 [Shigella boydii 965-58]
gi|391274089|gb|EIQ32903.1| shikimate kinase 1 [Shigella boydii 4444-74]
gi|391278501|gb|EIQ37208.1| shikimate kinase 1 [Shigella sonnei 3226-85]
gi|391292315|gb|EIQ50651.1| shikimate kinase family protein [Shigella sonnei 4822-66]
gi|391295783|gb|EIQ53910.1| shikimate kinase 1 [Shigella flexneri 1235-66]
gi|391298680|gb|EIQ56680.1| shikimate kinase 1 [Shigella dysenteriae 225-75]
gi|391302775|gb|EIQ60625.1| shikimate kinase 1 [Escherichia coli EPECa12]
gi|391310326|gb|EIQ67981.1| shikimate kinase family protein [Escherichia coli EPEC C342-62]
gi|394385901|gb|EJE63417.1| shikimate kinase I [Escherichia coli O111:H8 str. CVM9602]
gi|394388397|gb|EJE65679.1| shikimate kinase I [Escherichia coli O111:H8 str. CVM9634]
gi|394392047|gb|EJE68842.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM10224]
gi|394404840|gb|EJE80153.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM10021]
gi|394408613|gb|EJE83252.1| shikimate kinase I [Escherichia coli O111:H11 str. CVM9553]
gi|394418468|gb|EJE92142.1| shikimate kinase I [Escherichia coli O111:H11 str. CVM9455]
gi|394426020|gb|EJE98916.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM10030]
gi|394430370|gb|EJF02713.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM9952]
gi|397783389|gb|EJK94248.1| shikimate kinase family protein [Escherichia coli STEC_O31]
gi|397893748|gb|EJL10203.1| shikimate kinase family protein [Shigella flexneri 6603-63]
gi|397896525|gb|EJL12944.1| shikimate kinase family protein [Shigella sonnei str. Moseley]
gi|404290185|gb|EEH71084.2| shikimate kinase 1 [Escherichia sp. 1_1_43]
gi|404334813|gb|EJZ61289.1| shikimate kinase family protein [Shigella flexneri 1485-80]
gi|406775728|gb|AFS55152.1| shikimate kinase I [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407052302|gb|AFS72353.1| shikimate kinase I [Escherichia coli O104:H4 str. 2011C-3493]
gi|407067374|gb|AFS88421.1| shikimate kinase I [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408062213|gb|EKG96719.1| shikimate kinase I [Escherichia coli PA7]
gi|408064590|gb|EKG99071.1| shikimate kinase I [Escherichia coli FRIK920]
gi|408067326|gb|EKH01768.1| shikimate kinase I [Escherichia coli PA34]
gi|408076832|gb|EKH11046.1| shikimate kinase I [Escherichia coli FDA506]
gi|408080778|gb|EKH14827.1| shikimate kinase I [Escherichia coli FDA507]
gi|408089032|gb|EKH22364.1| shikimate kinase I [Escherichia coli FDA504]
gi|408095140|gb|EKH28126.1| shikimate kinase I [Escherichia coli FRIK1999]
gi|408101545|gb|EKH33978.1| shikimate kinase I [Escherichia coli FRIK1997]
gi|408106327|gb|EKH38435.1| shikimate kinase I [Escherichia coli NE1487]
gi|408113120|gb|EKH44727.1| shikimate kinase I [Escherichia coli NE037]
gi|408119294|gb|EKH50371.1| shikimate kinase I [Escherichia coli FRIK2001]
gi|408125476|gb|EKH56081.1| shikimate kinase I [Escherichia coli PA4]
gi|408135278|gb|EKH65070.1| shikimate kinase I [Escherichia coli PA23]
gi|408138082|gb|EKH67768.1| shikimate kinase I [Escherichia coli PA49]
gi|408144549|gb|EKH73779.1| shikimate kinase I [Escherichia coli PA45]
gi|408152850|gb|EKH81270.1| shikimate kinase I [Escherichia coli TT12B]
gi|408157884|gb|EKH86022.1| shikimate kinase I [Escherichia coli MA6]
gi|408161851|gb|EKH89776.1| shikimate kinase I [Escherichia coli 5905]
gi|408171308|gb|EKH98435.1| shikimate kinase I [Escherichia coli CB7326]
gi|408178001|gb|EKI04744.1| shikimate kinase I [Escherichia coli EC96038]
gi|408181088|gb|EKI07664.1| shikimate kinase I [Escherichia coli 5412]
gi|408190789|gb|EKI16421.1| shikimate kinase I [Escherichia coli TW15901]
gi|408198581|gb|EKI23804.1| shikimate kinase I [Escherichia coli ARS4.2123]
gi|408199551|gb|EKI24750.1| shikimate kinase I [Escherichia coli TW00353]
gi|408210070|gb|EKI34643.1| shikimate kinase I [Escherichia coli 3006]
gi|408211121|gb|EKI35674.1| shikimate kinase I [Escherichia coli 07798]
gi|408214550|gb|EKI38974.1| shikimate kinase I [Escherichia coli PA38]
gi|408224748|gb|EKI48452.1| shikimate kinase I [Escherichia coli EC1735]
gi|408226080|gb|EKI49739.1| shikimate kinase I [Escherichia coli N1]
gi|408236052|gb|EKI58972.1| shikimate kinase I [Escherichia coli EC1736]
gi|408239800|gb|EKI62538.1| shikimate kinase I [Escherichia coli EC1737]
gi|408244392|gb|EKI66830.1| shikimate kinase I [Escherichia coli EC1846]
gi|408253156|gb|EKI74769.1| shikimate kinase I [Escherichia coli EC1847]
gi|408256920|gb|EKI78274.1| shikimate kinase I [Escherichia coli EC1848]
gi|408263621|gb|EKI84465.1| shikimate kinase I [Escherichia coli EC1849]
gi|408272174|gb|EKI92281.1| shikimate kinase I [Escherichia coli EC1850]
gi|408274770|gb|EKI94756.1| shikimate kinase I [Escherichia coli EC1856]
gi|408283455|gb|EKJ02629.1| shikimate kinase I [Escherichia coli EC1862]
gi|408289173|gb|EKJ07947.1| shikimate kinase I [Escherichia coli EC1864]
gi|408294166|gb|EKJ12577.1| shikimate kinase I [Escherichia coli EC1865]
gi|408305122|gb|EKJ22530.1| shikimate kinase I [Escherichia coli EC1868]
gi|408305762|gb|EKJ23152.1| shikimate kinase I [Escherichia coli EC1866]
gi|408316620|gb|EKJ32880.1| shikimate kinase I [Escherichia coli EC1869]
gi|408322075|gb|EKJ38070.1| shikimate kinase I [Escherichia coli EC1870]
gi|408324498|gb|EKJ40431.1| shikimate kinase I [Escherichia coli NE098]
gi|408334776|gb|EKJ49652.1| shikimate kinase I [Escherichia coli FRIK523]
gi|408341395|gb|EKJ55848.1| shikimate kinase I [Escherichia coli 0.1288]
gi|408343803|gb|EKJ58196.1| shikimate kinase I [Escherichia coli 0.1304]
gi|408546251|gb|EKK23667.1| shikimate kinase 1 [Escherichia coli 5.2239]
gi|408546495|gb|EKK23909.1| shikimate kinase 1 [Escherichia coli 3.4870]
gi|408547365|gb|EKK24760.1| shikimate kinase I [Escherichia coli 6.0172]
gi|408564902|gb|EKK40999.1| shikimate kinase 1 [Escherichia coli 8.0586]
gi|408565720|gb|EKK41802.1| shikimate kinase 1 [Escherichia coli 8.0569]
gi|408576447|gb|EKK52039.1| shikimate kinase I [Escherichia coli 10.0833]
gi|408579209|gb|EKK54679.1| shikimate kinase 1 [Escherichia coli 8.2524]
gi|408589118|gb|EKK63650.1| shikimate kinase 1 [Escherichia coli 10.0869]
gi|408594496|gb|EKK68778.1| shikimate kinase 1 [Escherichia coli 88.0221]
gi|408599508|gb|EKK73408.1| shikimate kinase I [Escherichia coli 8.0416]
gi|408610193|gb|EKK83567.1| shikimate kinase 1 [Escherichia coli 10.0821]
gi|421933276|gb|EKT91069.1| shikimate kinase I [Escherichia coli O111:H11 str. CFSAN001630]
gi|421943196|gb|EKU00488.1| shikimate kinase I [Escherichia coli O111:H8 str. CFSAN001632]
gi|421944247|gb|EKU01508.1| shikimate kinase I [Escherichia coli O26:H11 str. CFSAN001629]
gi|427202090|gb|EKV72433.1| shikimate kinase 1 [Escherichia coli 88.1042]
gi|427203025|gb|EKV73331.1| shikimate kinase 1 [Escherichia coli 89.0511]
gi|427206116|gb|EKV76340.1| shikimate kinase 1 [Escherichia coli 88.1467]
gi|427218556|gb|EKV87553.1| shikimate kinase 1 [Escherichia coli 90.0091]
gi|427221849|gb|EKV90652.1| shikimate kinase 1 [Escherichia coli 90.2281]
gi|427239170|gb|EKW06662.1| shikimate kinase 1 [Escherichia coli 93.0056]
gi|427239523|gb|EKW07006.1| shikimate kinase 1 [Escherichia coli 93.0055]
gi|427243618|gb|EKW10982.1| shikimate kinase 1 [Escherichia coli 94.0618]
gi|427257827|gb|EKW23943.1| shikimate kinase 1 [Escherichia coli 95.0183]
gi|427258942|gb|EKW25016.1| shikimate kinase 1 [Escherichia coli 95.0943]
gi|427261412|gb|EKW27348.1| shikimate kinase 1 [Escherichia coli 95.1288]
gi|427274258|gb|EKW38917.1| shikimate kinase 1 [Escherichia coli 96.0428]
gi|427276985|gb|EKW41544.1| shikimate kinase 1 [Escherichia coli 96.0427]
gi|427281254|gb|EKW45579.1| shikimate kinase 1 [Escherichia coli 96.0939]
gi|427289763|gb|EKW53279.1| shikimate kinase 1 [Escherichia coli 96.0932]
gi|427296426|gb|EKW59480.1| shikimate kinase 1 [Escherichia coli 96.0107]
gi|427298495|gb|EKW61496.1| shikimate kinase 1 [Escherichia coli 97.0003]
gi|427309224|gb|EKW71547.1| shikimate kinase 1 [Escherichia coli 97.1742]
gi|427312557|gb|EKW74710.1| shikimate kinase 1 [Escherichia coli 97.0007]
gi|427316982|gb|EKW78900.1| shikimate kinase 1 [Escherichia coli 99.0672]
gi|427325671|gb|EKW87105.1| shikimate kinase I [Escherichia coli 99.0678]
gi|427327136|gb|EKW88536.1| shikimate kinase 1 [Escherichia coli 99.0713]
gi|429251749|gb|EKY36327.1| shikimate kinase 1 [Escherichia coli 96.0109]
gi|429253013|gb|EKY37513.1| shikimate kinase 1 [Escherichia coli 97.0010]
gi|429346774|gb|EKY83553.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02092]
gi|429356753|gb|EKY93428.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02033-1]
gi|429357628|gb|EKY94301.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02030]
gi|429372920|gb|EKZ09469.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02093]
gi|429374861|gb|EKZ11400.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02281]
gi|429377491|gb|EKZ14012.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02318]
gi|429388723|gb|EKZ25148.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02913]
gi|429391492|gb|EKZ27896.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-03439]
gi|429392501|gb|EKZ28902.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-03943]
gi|429402022|gb|EKZ38315.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-04080]
gi|429403075|gb|EKZ39360.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-9990]
gi|429406702|gb|EKZ42957.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-9450]
gi|429414743|gb|EKZ50917.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-4984]
gi|429418213|gb|EKZ54359.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-4986]
gi|429424505|gb|EKZ60606.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-4987]
gi|429428308|gb|EKZ64384.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-4988]
gi|429433365|gb|EKZ69398.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-5603]
gi|429440325|gb|EKZ76303.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-5604]
gi|429445223|gb|EKZ81165.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec12-0465]
gi|429449164|gb|EKZ85066.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-6006]
gi|429454815|gb|EKZ90673.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec12-0466]
gi|429458922|gb|EKZ94742.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-9941]
gi|430872836|gb|ELB96416.1| shikimate kinase 1 [Escherichia coli KTE2]
gi|430874143|gb|ELB97708.1| shikimate kinase 1 [Escherichia coli KTE4]
gi|430883482|gb|ELC06476.1| shikimate kinase 1 [Escherichia coli KTE5]
gi|430891640|gb|ELC14166.1| shikimate kinase 1 [Escherichia coli KTE10]
gi|430896185|gb|ELC18429.1| shikimate kinase 1 [Escherichia coli KTE12]
gi|430904609|gb|ELC26318.1| shikimate kinase 1 [Escherichia coli KTE16]
gi|430913205|gb|ELC34335.1| shikimate kinase 1 [Escherichia coli KTE25]
gi|430915176|gb|ELC36260.1| shikimate kinase 1 [Escherichia coli KTE21]
gi|430923153|gb|ELC43890.1| shikimate kinase 1 [Escherichia coli KTE26]
gi|430927328|gb|ELC47892.1| shikimate kinase 1 [Escherichia coli KTE28]
gi|430933436|gb|ELC53842.1| shikimate kinase 1 [Escherichia coli KTE39]
gi|430936690|gb|ELC56958.1| shikimate kinase 1 [Escherichia coli KTE44]
gi|430942135|gb|ELC62273.1| shikimate kinase 1 [Escherichia coli KTE178]
gi|430950773|gb|ELC70001.1| shikimate kinase 1 [Escherichia coli KTE187]
gi|430951839|gb|ELC71047.1| shikimate kinase 1 [Escherichia coli KTE181]
gi|430960748|gb|ELC78799.1| shikimate kinase 1 [Escherichia coli KTE188]
gi|430963914|gb|ELC81493.1| shikimate kinase 1 [Escherichia coli KTE189]
gi|430971070|gb|ELC88092.1| shikimate kinase 1 [Escherichia coli KTE191]
gi|430978032|gb|ELC94855.1| shikimate kinase 1 [Escherichia coli KTE193]
gi|430979964|gb|ELC96728.1| shikimate kinase 1 [Escherichia coli KTE201]
gi|430985968|gb|ELD02551.1| shikimate kinase 1 [Escherichia coli KTE204]
gi|430991317|gb|ELD07721.1| shikimate kinase 1 [Escherichia coli KTE205]
gi|430995724|gb|ELD12014.1| shikimate kinase 1 [Escherichia coli KTE206]
gi|431002304|gb|ELD17817.1| shikimate kinase 1 [Escherichia coli KTE208]
gi|431004308|gb|ELD19534.1| shikimate kinase 1 [Escherichia coli KTE210]
gi|431013860|gb|ELD27582.1| shikimate kinase 1 [Escherichia coli KTE212]
gi|431018294|gb|ELD31730.1| shikimate kinase 1 [Escherichia coli KTE213]
gi|431021034|gb|ELD34363.1| shikimate kinase 1 [Escherichia coli KTE214]
gi|431026119|gb|ELD39194.1| shikimate kinase 1 [Escherichia coli KTE216]
gi|431035605|gb|ELD46988.1| shikimate kinase 1 [Escherichia coli KTE220]
gi|431038471|gb|ELD49367.1| shikimate kinase 1 [Escherichia coli KTE224]
gi|431047811|gb|ELD57796.1| shikimate kinase 1 [Escherichia coli KTE228]
gi|431048823|gb|ELD58791.1| shikimate kinase 1 [Escherichia coli KTE230]
gi|431057996|gb|ELD67406.1| shikimate kinase 1 [Escherichia coli KTE234]
gi|431060867|gb|ELD70189.1| shikimate kinase 1 [Escherichia coli KTE233]
gi|431067133|gb|ELD75742.1| shikimate kinase 1 [Escherichia coli KTE235]
gi|431071929|gb|ELD79686.1| shikimate kinase 1 [Escherichia coli KTE236]
gi|431077486|gb|ELD84737.1| shikimate kinase 1 [Escherichia coli KTE237]
gi|431081114|gb|ELD87893.1| shikimate kinase 1 [Escherichia coli KTE47]
gi|431088714|gb|ELD94584.1| shikimate kinase 1 [Escherichia coli KTE49]
gi|431090352|gb|ELD96121.1| shikimate kinase 1 [Escherichia coli KTE51]
gi|431097686|gb|ELE03013.1| shikimate kinase 1 [Escherichia coli KTE53]
gi|431104899|gb|ELE09263.1| shikimate kinase 1 [Escherichia coli KTE55]
gi|431112711|gb|ELE16393.1| shikimate kinase 1 [Escherichia coli KTE56]
gi|431114811|gb|ELE18338.1| shikimate kinase 1 [Escherichia coli KTE57]
gi|431117892|gb|ELE21116.1| shikimate kinase 1 [Escherichia coli KTE58]
gi|431126036|gb|ELE28390.1| shikimate kinase 1 [Escherichia coli KTE60]
gi|431128448|gb|ELE30632.1| shikimate kinase 1 [Escherichia coli KTE62]
gi|431135730|gb|ELE37605.1| shikimate kinase 1 [Escherichia coli KTE67]
gi|431137590|gb|ELE39435.1| shikimate kinase 1 [Escherichia coli KTE66]
gi|431146413|gb|ELE47849.1| shikimate kinase 1 [Escherichia coli KTE72]
gi|431151673|gb|ELE52686.1| shikimate kinase 1 [Escherichia coli KTE75]
gi|431156655|gb|ELE57322.1| shikimate kinase 1 [Escherichia coli KTE76]
gi|431160888|gb|ELE61389.1| shikimate kinase 1 [Escherichia coli KTE77]
gi|431167420|gb|ELE67685.1| shikimate kinase 1 [Escherichia coli KTE80]
gi|431168917|gb|ELE69149.1| shikimate kinase 1 [Escherichia coli KTE81]
gi|431177693|gb|ELE77607.1| shikimate kinase 1 [Escherichia coli KTE83]
gi|431178031|gb|ELE77944.1| shikimate kinase 1 [Escherichia coli KTE86]
gi|431187393|gb|ELE86894.1| shikimate kinase 1 [Escherichia coli KTE87]
gi|431187734|gb|ELE87233.1| shikimate kinase 1 [Escherichia coli KTE93]
gi|431197178|gb|ELE96044.1| shikimate kinase 1 [Escherichia coli KTE111]
gi|431197755|gb|ELE96582.1| shikimate kinase 1 [Escherichia coli KTE116]
gi|431208260|gb|ELF06482.1| shikimate kinase 1 [Escherichia coli KTE119]
gi|431211721|gb|ELF09682.1| shikimate kinase 1 [Escherichia coli KTE142]
gi|431217650|gb|ELF15216.1| shikimate kinase 1 [Escherichia coli KTE143]
gi|431219641|gb|ELF17035.1| shikimate kinase 1 [Escherichia coli KTE156]
gi|431231476|gb|ELF27237.1| shikimate kinase 1 [Escherichia coli KTE162]
gi|431235962|gb|ELF31176.1| shikimate kinase 1 [Escherichia coli KTE161]
gi|431240013|gb|ELF34475.1| shikimate kinase 1 [Escherichia coli KTE169]
gi|431240804|gb|ELF35252.1| shikimate kinase 1 [Escherichia coli KTE171]
gi|431252459|gb|ELF45974.1| shikimate kinase 1 [Escherichia coli KTE8]
gi|431255261|gb|ELF48515.1| shikimate kinase 1 [Escherichia coli KTE6]
gi|431260542|gb|ELF52639.1| shikimate kinase 1 [Escherichia coli KTE9]
gi|431262069|gb|ELF54059.1| shikimate kinase 1 [Escherichia coli KTE17]
gi|431271250|gb|ELF62389.1| shikimate kinase 1 [Escherichia coli KTE18]
gi|431272029|gb|ELF63147.1| shikimate kinase 1 [Escherichia coli KTE45]
gi|431279914|gb|ELF70861.1| shikimate kinase 1 [Escherichia coli KTE42]
gi|431281277|gb|ELF72180.1| shikimate kinase 1 [Escherichia coli KTE23]
gi|431289264|gb|ELF80005.1| shikimate kinase 1 [Escherichia coli KTE43]
gi|431293777|gb|ELF84060.1| shikimate kinase 1 [Escherichia coli KTE29]
gi|431299854|gb|ELF89420.1| shikimate kinase 1 [Escherichia coli KTE22]
gi|431306528|gb|ELF94841.1| shikimate kinase 1 [Escherichia coli KTE46]
gi|431307367|gb|ELF95659.1| shikimate kinase 1 [Escherichia coli KTE48]
gi|431322154|gb|ELG09742.1| shikimate kinase 1 [Escherichia coli KTE50]
gi|431324109|gb|ELG11565.1| shikimate kinase 1 [Escherichia coli KTE54]
gi|431324785|gb|ELG12201.1| shikimate kinase 1 [Escherichia coli KTE59]
gi|431326430|gb|ELG13776.1| shikimate kinase 1 [Escherichia coli KTE63]
gi|431335266|gb|ELG22406.1| shikimate kinase 1 [Escherichia coli KTE65]
gi|431337067|gb|ELG24161.1| shikimate kinase 1 [Escherichia coli KTE78]
gi|431346092|gb|ELG33005.1| shikimate kinase 1 [Escherichia coli KTE84]
gi|431349320|gb|ELG36161.1| shikimate kinase 1 [Escherichia coli KTE79]
gi|431353061|gb|ELG39819.1| shikimate kinase 1 [Escherichia coli KTE91]
gi|431360260|gb|ELG46871.1| shikimate kinase 1 [Escherichia coli KTE101]
gi|431361536|gb|ELG48117.1| shikimate kinase 1 [Escherichia coli KTE115]
gi|431365554|gb|ELG52059.1| shikimate kinase 1 [Escherichia coli KTE118]
gi|431378800|gb|ELG63791.1| shikimate kinase 1 [Escherichia coli KTE123]
gi|431382426|gb|ELG66764.1| shikimate kinase 1 [Escherichia coli KTE136]
gi|431383073|gb|ELG67214.1| shikimate kinase 1 [Escherichia coli KTE135]
gi|431386405|gb|ELG70361.1| shikimate kinase 1 [Escherichia coli KTE140]
gi|431392700|gb|ELG76271.1| shikimate kinase 1 [Escherichia coli KTE141]
gi|431397872|gb|ELG81304.1| shikimate kinase 1 [Escherichia coli KTE144]
gi|431402179|gb|ELG85492.1| shikimate kinase 1 [Escherichia coli KTE146]
gi|431408861|gb|ELG92043.1| shikimate kinase 1 [Escherichia coli KTE147]
gi|431414056|gb|ELG96805.1| shikimate kinase 1 [Escherichia coli KTE158]
gi|431418155|gb|ELH00569.1| shikimate kinase 1 [Escherichia coli KTE154]
gi|431423605|gb|ELH05731.1| shikimate kinase 1 [Escherichia coli KTE192]
gi|431428056|gb|ELH09998.1| shikimate kinase 1 [Escherichia coli KTE194]
gi|431431125|gb|ELH12903.1| shikimate kinase 1 [Escherichia coli KTE165]
gi|431435515|gb|ELH17124.1| shikimate kinase 1 [Escherichia coli KTE173]
gi|431436010|gb|ELH17617.1| shikimate kinase 1 [Escherichia coli KTE190]
gi|431440655|gb|ELH21983.1| shikimate kinase 1 [Escherichia coli KTE175]
gi|431454113|gb|ELH34491.1| shikimate kinase 1 [Escherichia coli KTE196]
gi|431460089|gb|ELH40378.1| shikimate kinase 1 [Escherichia coli KTE183]
gi|431460793|gb|ELH41078.1| shikimate kinase 1 [Escherichia coli KTE184]
gi|431464810|gb|ELH44928.1| shikimate kinase 1 [Escherichia coli KTE197]
gi|431470419|gb|ELH50341.1| shikimate kinase 1 [Escherichia coli KTE202]
gi|431477262|gb|ELH57032.1| shikimate kinase 1 [Escherichia coli KTE203]
gi|431479008|gb|ELH58751.1| shikimate kinase 1 [Escherichia coli KTE207]
gi|431486400|gb|ELH66050.1| shikimate kinase 1 [Escherichia coli KTE209]
gi|431489427|gb|ELH69054.1| shikimate kinase 1 [Escherichia coli KTE211]
gi|431491634|gb|ELH71238.1| shikimate kinase 1 [Escherichia coli KTE217]
gi|431494478|gb|ELH74066.1| shikimate kinase 1 [Escherichia coli KTE215]
gi|431502744|gb|ELH81629.1| shikimate kinase 1 [Escherichia coli KTE218]
gi|431504725|gb|ELH83349.1| shikimate kinase 1 [Escherichia coli KTE223]
gi|431510413|gb|ELH88658.1| shikimate kinase 1 [Escherichia coli KTE227]
gi|431521508|gb|ELH98753.1| shikimate kinase 1 [Escherichia coli KTE229]
gi|431527064|gb|ELI03791.1| shikimate kinase 1 [Escherichia coli KTE104]
gi|431527515|gb|ELI04230.1| shikimate kinase 1 [Escherichia coli KTE105]
gi|431531602|gb|ELI08259.1| shikimate kinase 1 [Escherichia coli KTE106]
gi|431540766|gb|ELI16220.1| shikimate kinase 1 [Escherichia coli KTE109]
gi|431547307|gb|ELI21687.1| shikimate kinase 1 [Escherichia coli KTE112]
gi|431548958|gb|ELI23049.1| shikimate kinase 1 [Escherichia coli KTE113]
gi|431553647|gb|ELI27572.1| shikimate kinase 1 [Escherichia coli KTE117]
gi|431562493|gb|ELI35795.1| shikimate kinase 1 [Escherichia coli KTE120]
gi|431566510|gb|ELI39533.1| shikimate kinase 1 [Escherichia coli KTE124]
gi|431567140|gb|ELI40153.1| shikimate kinase 1 [Escherichia coli KTE122]
gi|431578672|gb|ELI51265.1| shikimate kinase 1 [Escherichia coli KTE125]
gi|431579816|gb|ELI52387.1| shikimate kinase 1 [Escherichia coli KTE128]
gi|431583878|gb|ELI55866.1| shikimate kinase 1 [Escherichia coli KTE129]
gi|431594161|gb|ELI64444.1| shikimate kinase 1 [Escherichia coli KTE131]
gi|431598274|gb|ELI68070.1| shikimate kinase 1 [Escherichia coli KTE133]
gi|431602357|gb|ELI71800.1| shikimate kinase 1 [Escherichia coli KTE137]
gi|431607691|gb|ELI77046.1| shikimate kinase 1 [Escherichia coli KTE138]
gi|431612886|gb|ELI82092.1| shikimate kinase 1 [Escherichia coli KTE139]
gi|431616420|gb|ELI85481.1| shikimate kinase 1 [Escherichia coli KTE145]
gi|431624517|gb|ELI93134.1| shikimate kinase 1 [Escherichia coli KTE148]
gi|431625572|gb|ELI94150.1| shikimate kinase 1 [Escherichia coli KTE150]
gi|431631324|gb|ELI99636.1| shikimate kinase 1 [Escherichia coli KTE153]
gi|431639261|gb|ELJ07124.1| shikimate kinase 1 [Escherichia coli KTE157]
gi|431641225|gb|ELJ08968.1| shikimate kinase 1 [Escherichia coli KTE160]
gi|431643715|gb|ELJ11405.1| shikimate kinase 1 [Escherichia coli KTE163]
gi|431653772|gb|ELJ20849.1| shikimate kinase 1 [Escherichia coli KTE166]
gi|431656672|gb|ELJ23647.1| shikimate kinase 1 [Escherichia coli KTE167]
gi|431658458|gb|ELJ25371.1| shikimate kinase 1 [Escherichia coli KTE168]
gi|431667610|gb|ELJ34190.1| shikimate kinase 1 [Escherichia coli KTE174]
gi|431670964|gb|ELJ37255.1| shikimate kinase 1 [Escherichia coli KTE176]
gi|431674522|gb|ELJ40683.1| shikimate kinase 1 [Escherichia coli KTE177]
gi|431684188|gb|ELJ49800.1| shikimate kinase 1 [Escherichia coli KTE179]
gi|431684540|gb|ELJ50146.1| shikimate kinase 1 [Escherichia coli KTE180]
gi|431689389|gb|ELJ54896.1| shikimate kinase 1 [Escherichia coli KTE232]
gi|431698348|gb|ELJ63397.1| shikimate kinase 1 [Escherichia coli KTE82]
gi|431702549|gb|ELJ67345.1| shikimate kinase 1 [Escherichia coli KTE88]
gi|431702739|gb|ELJ67534.1| shikimate kinase 1 [Escherichia coli KTE85]
gi|431713485|gb|ELJ77719.1| shikimate kinase 1 [Escherichia coli KTE90]
gi|431716729|gb|ELJ80835.1| shikimate kinase 1 [Escherichia coli KTE95]
gi|431717876|gb|ELJ81958.1| shikimate kinase 1 [Escherichia coli KTE94]
gi|431728385|gb|ELJ92065.1| shikimate kinase 1 [Escherichia coli KTE97]
gi|431732361|gb|ELJ95816.1| shikimate kinase 1 [Escherichia coli KTE99]
gi|432347247|gb|ELL41710.1| shikimate kinase I [Escherichia coli J96]
gi|443423961|gb|AGC88865.1| shikimate kinase I [Escherichia coli APEC O78]
gi|444535952|gb|ELV16000.1| shikimate kinase 1 [Escherichia coli 99.0814]
gi|444537551|gb|ELV17483.1| shikimate kinase 1 [Escherichia coli 09BKT078844]
gi|444546122|gb|ELV24898.1| shikimate kinase 1 [Escherichia coli 99.0815]
gi|444555377|gb|ELV32846.1| shikimate kinase 1 [Escherichia coli 99.0839]
gi|444555853|gb|ELV33296.1| shikimate kinase 1 [Escherichia coli 99.0816]
gi|444560652|gb|ELV37801.1| shikimate kinase 1 [Escherichia coli 99.0848]
gi|444570129|gb|ELV46673.1| shikimate kinase 1 [Escherichia coli 99.1753]
gi|444573936|gb|ELV50279.1| shikimate kinase 1 [Escherichia coli 99.1775]
gi|444576921|gb|ELV53067.1| shikimate kinase 1 [Escherichia coli 99.1793]
gi|444590138|gb|ELV65452.1| shikimate kinase 1 [Escherichia coli PA11]
gi|444590413|gb|ELV65724.1| shikimate kinase 1 [Escherichia coli ATCC 700728]
gi|444591388|gb|ELV66678.1| shikimate kinase 1 [Escherichia coli 99.1805]
gi|444604156|gb|ELV78831.1| shikimate kinase 1 [Escherichia coli PA13]
gi|444604735|gb|ELV79398.1| shikimate kinase 1 [Escherichia coli PA19]
gi|444613153|gb|ELV87416.1| shikimate kinase 1 [Escherichia coli PA2]
gi|444620859|gb|ELV94851.1| shikimate kinase 1 [Escherichia coli PA47]
gi|444621088|gb|ELV95066.1| shikimate kinase 1 [Escherichia coli PA48]
gi|444627567|gb|ELW01325.1| shikimate kinase 1 [Escherichia coli PA8]
gi|444635864|gb|ELW09273.1| shikimate kinase 1 [Escherichia coli 7.1982]
gi|444638416|gb|ELW11754.1| shikimate kinase 1 [Escherichia coli 99.1781]
gi|444642978|gb|ELW16149.1| shikimate kinase 1 [Escherichia coli 99.1762]
gi|444652376|gb|ELW25137.1| shikimate kinase 1 [Escherichia coli PA35]
gi|444657599|gb|ELW30068.1| shikimate kinase 1 [Escherichia coli 3.4880]
gi|444660664|gb|ELW33014.1| shikimate kinase 1 [Escherichia coli 95.0083]
gi|444667876|gb|ELW39904.1| shikimate kinase 1 [Escherichia coli 99.0670]
gi|449314513|gb|EMD04679.1| shikimate kinase I [Escherichia coli O08]
gi|449315406|gb|EMD05549.1| shikimate kinase I [Escherichia coli S17]
gi|449317060|gb|EMD07154.1| shikimate kinase I [Escherichia coli SEPT362]
Length = 173
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 7/146 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F+D D IE+ G V +F L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRT-GADVGWVFDLEGEEGFRDRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SR 175
+V+ +L+ + +V++TGGG+V +R R +G+ V+L+ +E +++A D R
Sbjct: 64 EKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKR 120
Query: 176 PLLHQCESGDAYTEAL-NRLSTLWEE 200
PLLH EAL N + L+EE
Sbjct: 121 PLLHVETPPREVLEALANERNPLYEE 146
>gi|440228122|ref|YP_007335213.1| shikimate kinase [Rhizobium tropici CIAT 899]
gi|440039633|gb|AGB72667.1| shikimate kinase [Rhizobium tropici CIAT 899]
Length = 239
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 34 VHAPIDE-----AQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDC 88
V+ P+ E A+ L++K++ L R + VG+MG+GK+++G+ ++ LG F D
Sbjct: 39 VNGPMSEQVLTLAESLRDKARAA---LGQRNLVFVGLMGAGKSSIGRPVAHQLGLPFVDT 95
Query: 89 DTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM 148
D IE+ V ++AE+F YGE FR ET V+++L VVSTGGGA ++
Sbjct: 96 DAEIER-VSRMTIAELFAAYGEQEFRALETRVIKRLLKGGPRVVSTGGGAFINERTRLHV 154
Query: 149 QKG-ISVWLDVPLEALAQRIAAVGTDSRPLL 178
++G +SVWL L+ L +R+ D+RPLL
Sbjct: 155 KRGSLSVWLKADLDVLWERVNK--RDTRPLL 183
>gi|222149984|ref|YP_002550941.1| shikimate kinase [Agrobacterium vitis S4]
gi|221736966|gb|ACM37929.1| shikimate kinase [Agrobacterium vitis S4]
Length = 197
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 74/125 (59%), Gaps = 4/125 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + VG+MG+GK+ +G++++ L F D DT IE+ V +++E+F YGE FR
Sbjct: 20 LGRRNLIFVGLMGAGKSAIGRLVAQQLNLPFIDTDTEIER-VSRMTISELFAAYGETEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
ET V+++L VVSTGGGA R +++ GIS+WL L+ L +R+ D
Sbjct: 79 ALETRVIRRLLRSGPKVVSTGGGAFINDRTRRQIERGGISIWLKADLDVLWERVNK--RD 136
Query: 174 SRPLL 178
RPLL
Sbjct: 137 HRPLL 141
>gi|118445057|ref|YP_879086.1| shikimate kinase [Clostridium novyi NT]
gi|118135513|gb|ABK62557.1| shikimate kinase [Clostridium novyi NT]
Length = 164
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 15/149 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM G GKTT+GK LS +L F D D I S G S+ EIF+ GE FFR+ E++
Sbjct: 8 IVLIGMPGCGKTTIGKKLSEILKCDFCDVDEYIVNST-GKSINEIFE-NGEEFFRDIESK 65
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++++S V+STGGGA+ R N + +KG +++ P+E + + V SRPLL
Sbjct: 66 SIKEVSSCIPKVISTGGGAIKRKQNIDSLKEKGTIFFINRPIEDIC---SDVDVKSRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYAN 207
+ + ++ L+EER + Y N
Sbjct: 123 K---------DGVGKIYKLYEERYDLYKN 142
>gi|374336804|ref|YP_005093491.1| shikimate kinase I [Oceanimonas sp. GK1]
gi|372986491|gb|AEY02741.1| shikimate kinase I [Oceanimonas sp. GK1]
Length = 172
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 89/149 (59%), Gaps = 10/149 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+GK L+ L F+D D IE+ G ++ +F + GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGKYLAQQLHMEFYDSDHEIERRT-GADISWVFDVEGEEGFRQRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRP 176
+V+ +LS ++ +V++TGGG++ +R R +GI V+L+ +E +++A V D R
Sbjct: 64 EKVINELSELQGIVLATGGGSIKSRESRNRLSARGIVVYLETTVE---KQLARVQKDKRR 120
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAY 205
L Q E + E L RL+ ER E Y
Sbjct: 121 PLLQTE--EPPREVLERLA---HERNELY 144
>gi|284800124|ref|ZP_05985763.2| shikimate kinase [Neisseria subflava NJ9703]
gi|284795809|gb|EFC51156.1| shikimate kinase [Neisseria subflava NJ9703]
Length = 202
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G+MG+GKTT+GK L+ + F+D D I S G S+ IF++ GE FR +ET
Sbjct: 40 LILIGLMGAGKTTLGKQLAQMFECPFYDSDYEICTS-SGVSIPTIFEMEGEEGFRNRETN 98
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+KL+ R +V+STGGG+V R N + + Q G V+L E L +R +RPLL
Sbjct: 99 MLKKLASRRNIVLSTGGGSVLRSENRQILRQNGTVVYLHASPETLLERTRY--DSNRPLL 156
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ L +L L+++R Y
Sbjct: 157 Q-------VADPLAKLQELYDQRDTLY 176
>gi|254293150|ref|YP_003059173.1| shikimate kinase [Hirschia baltica ATCC 49814]
gi|254041681|gb|ACT58476.1| Shikimate kinase [Hirschia baltica ATCC 49814]
Length = 191
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 4/124 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I LVG+MG+GK++VG+ L+ L FFD D +E++ T + EIF +GE FR E
Sbjct: 26 QTIVLVGIMGAGKSSVGRRLAQELKIPFFDSDDEVEKAASMT-IPEIFSKHGEEEFRRVE 84
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
V+++L +++++TGGGA MQK I+VWL+ LE L +R++ G RP
Sbjct: 85 ARVIERLLEEPRMILATGGGAFMNEATREIMQKNAITVWLNADLETLWRRVSKKG--GRP 142
Query: 177 LLHQ 180
LL +
Sbjct: 143 LLKK 146
>gi|239833073|ref|ZP_04681402.1| Shikimate kinase [Ochrobactrum intermedium LMG 3301]
gi|239825340|gb|EEQ96908.1| Shikimate kinase [Ochrobactrum intermedium LMG 3301]
Length = 206
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 90/167 (53%), Gaps = 11/167 (6%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L K++ I L + + LVG+MG+GK+TVG+ + +LG F D DT IE +V +V E
Sbjct: 20 LHEKAELIRDLLGSKVVVLVGLMGAGKSTVGRKAASLLGLPFRDADTEIE-AVSRMTVPE 78
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEA 162
+F+ YGE FR+ E V+ +L +V++TGGGA + + G+S+WL+ ++
Sbjct: 79 LFEAYGEVEFRDLERRVIMRLLEDGPMVLATGGGAYMNAETRAAIARAGVSIWLNAEIDI 138
Query: 163 LAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
L +R++ +RPLL + +N ER YA A+
Sbjct: 139 LMERVSR--RQNRPLLKNSDPRGVMLRLMN-------ERYPVYALAD 176
>gi|153008244|ref|YP_001369459.1| shikimate kinase [Ochrobactrum anthropi ATCC 49188]
gi|151560132|gb|ABS13630.1| Shikimate kinase [Ochrobactrum anthropi ATCC 49188]
Length = 206
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 17/170 (10%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L K++ I L + + LVG+MG+GK+TVG+ + +LG F D DT IE +V ++ E
Sbjct: 20 LHEKAELIRDLLGSKVVVLVGLMGAGKSTVGRKAAALLGLPFRDADTEIE-AVSRMTIPE 78
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVP 159
+F+ YGE FR+ E V+ +L +V++TGGGA TR R G+SVWL+
Sbjct: 79 LFEAYGEVEFRDLERRVIMRLLEDGPMVLATGGGAYMNAETRAAIGR---AGVSVWLNAE 135
Query: 160 LEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
++ L +R++ +RPLL + +N ER YA A+
Sbjct: 136 IDILMERVSR--RQNRPLLKNSDPRGVMLRLMN-------ERYPVYALAD 176
>gi|265993789|ref|ZP_06106346.1| shikimate kinase [Brucella melitensis bv. 3 str. Ether]
gi|262764770|gb|EEZ10691.1| shikimate kinase [Brucella melitensis bv. 3 str. Ether]
Length = 217
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L +++ I L + + LVG+MG+GK+T+G+ ++ +L F D DT IE +V +VAE
Sbjct: 27 LHRQTETIRQLLGSKVVVLVGLMGAGKSTIGRKVANMLNLPFKDADTEIE-TVSRMTVAE 85
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEA 162
+F+ YGE FR+ E V+ +L +V++TGGGA + + GIS+W++ L+
Sbjct: 86 LFEAYGEVEFRDLERRVILRLLDDGPMVLATGGGAYMNAETRAAIAEAGISIWINADLDV 145
Query: 163 LAQRIAAVGTDSRPLLHQCE 182
L +R++ +RPLL +
Sbjct: 146 LMERVSR--RQNRPLLRNSD 163
>gi|373457548|ref|ZP_09549315.1| Shikimate kinase [Caldithrix abyssi DSM 13497]
gi|371719212|gb|EHO40983.1| Shikimate kinase [Caldithrix abyssi DSM 13497]
Length = 186
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 88/157 (56%), Gaps = 5/157 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ R IYL G MG+GK+ +G+ L+ +L F D D IE+ V G +V IF+ GE FFR
Sbjct: 1 MKKRHIYLTGFMGAGKSRIGRHLADLLNLPFVDTDQEIEKMV-GKTVRRIFEEEGEAFFR 59
Query: 115 EKETEVLQKLSLM-RQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGT 172
++E E+++++S VV+ GGGA+ + + + GI ++L EA+ +R+A +
Sbjct: 60 KQEAEIVRQVSQHPAPRVVALGGGALNDSRSLENIHRSGIVIYLKSAPEAIFKRVAH--S 117
Query: 173 DSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
RPLL E+ D + R+ L ++R Y A+
Sbjct: 118 RKRPLLDVDEAPDREAILVKRIEDLLQKREGLYLQAD 154
>gi|163759947|ref|ZP_02167031.1| shikimate kinase protein [Hoeflea phototrophica DFL-43]
gi|162282905|gb|EDQ33192.1| shikimate kinase protein [Hoeflea phototrophica DFL-43]
Length = 199
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 11/159 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + VG+MG+GK+ +G++++ +L F D D IE+ V ++AE+F+ YGE FR
Sbjct: 20 LGHRNLVFVGLMGAGKSAIGRLVAQMLEIPFVDSDHEIER-VSRMTIAELFEAYGEAEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
ET V+ +L V+STGGG + R ++ G+SVWL L+ L R++ D
Sbjct: 79 ALETRVITRLMKTGPRVLSTGGGVFMNEATRSRVLKSGLSVWLKADLDILWARVSK--RD 136
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
+RPLL LS L ++R YA A+ V
Sbjct: 137 TRPLLKTANPKQT-------LSDLLDQRYPVYALADVTV 168
>gi|440229680|ref|YP_007343473.1| shikimate kinase [Serratia marcescens FGI94]
gi|440051385|gb|AGB81288.1| shikimate kinase [Serratia marcescens FGI94]
Length = 175
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 79/145 (54%), Gaps = 4/145 (2%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I++VG G+GKTTVG+ L+ + Y F D D ++Q+ SVAEI G FR +E
Sbjct: 3 QTIFMVGARGAGKTTVGRALAQAMDYRFIDIDLFMQQTTQ-MSVAEIVAQEGWQGFRRRE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDS-R 175
+ LQ ++ +V+TGGGAV N R+M Q G ++L P E LAQR+ A D+ R
Sbjct: 62 SLALQAVT-KPSTIVATGGGAVLAEENRRFMRQHGTVIYLRAPAEVLAQRLEAFPQDAQR 120
Query: 176 PLLHQCESGDAYTEALNRLSTLWEE 200
P L + E L L++E
Sbjct: 121 PTLTGRPIAEEMLEVLAAREALYQE 145
>gi|325106374|ref|YP_004276028.1| shikimate kinase [Pedobacter saltans DSM 12145]
gi|324975222|gb|ADY54206.1| Shikimate kinase [Pedobacter saltans DSM 12145]
Length = 171
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVG MG GK+ +GK L+ L F D D LI Q+ ++ EIF GE FRE E +
Sbjct: 3 IFLVGYMGCGKSRMGKKLASKLERPFIDLDELI-QTKHQATIPEIFAARGENGFREIERD 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
LQK ++ +VSTGGGA N +M K G+++++D P + LA R+ + RPL+
Sbjct: 62 TLQKSAIANNTIVSTGGGAPCFFDNMEWMNKNGLTIFIDPPEKVLADRLINAKAE-RPLI 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANA 208
G +Y E L + ER Y A
Sbjct: 121 ----KGKSYDELLAFIHEKLAERRFFYEQA 146
>gi|303234217|ref|ZP_07320863.1| shikimate kinase [Finegoldia magna BVS033A4]
gi|302494758|gb|EFL54518.1| shikimate kinase [Finegoldia magna BVS033A4]
Length = 403
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I LVGM GSGK+TV KI++ G D D +I Q +++IF GE +FR+ E+E
Sbjct: 247 IALVGMPGSGKSTVAKIIAKNTGKKLVDIDKIITQRY--GDISDIFAAQGENYFRKIESE 304
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQR 166
VL++ S + LV++TGGGAVT N+ Y+ Q + W+D P L++R
Sbjct: 305 VLEEFSKEKNLVIATGGGAVTVKKNFYYLHQNSVVYWIDRPNSKLSKR 352
>gi|410665443|ref|YP_006917814.1| shikimate kinase [Simiduia agarivorans SA1 = DSM 21679]
gi|409027800|gb|AFV00085.1| shikimate kinase [Simiduia agarivorans SA1 = DSM 21679]
Length = 170
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 4/155 (2%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R ++LVG MG+GKTT+GK+L+ LGY F D D IE G + IF + GE FR++E
Sbjct: 3 RPVFLVGPMGAGKTTIGKLLAQQLGYPFKDTDREIEDRT-GADIPWIFDVEGEAGFRDRE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
+L ++ Q V++TGGG + R N ++ GI +L +E L +R A RP
Sbjct: 62 VAILADIATQGQQVIATGGGIIMREENRECLKVSGIVFFLTASIEQLLERTAK--DKRRP 119
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANAR 211
LL + E + L+ E + N R
Sbjct: 120 LLQVADPEARIRELIALREPLYREVATHVIDTNRR 154
>gi|329905847|ref|ZP_08274235.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacteraceae bacterium IMCC9480]
gi|327547487|gb|EGF32303.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacteraceae bacterium IMCC9480]
Length = 568
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 23/184 (12%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L+G+MGSGKTTVG+ L+ L F D D IE G S+ IF++ GE FR++E E
Sbjct: 5 IFLIGLMGSGKTTVGRALARKLNKRFIDSDHEIEART-GASIPVIFEVEGEASFRQREAE 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD-SRPL 177
V++ L+ + +V++TGGGA+ P + + ++G ++L + ++ R G D +RPL
Sbjct: 64 VIKDLTALDDIVLATGGGAILNPASRALLAERGTVIYLRASVSSILHR---TGHDKNRPL 120
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYA----------NANARVSLENIAVKLGHKDVS 227
L + RL L +R YA N + + NI + LG
Sbjct: 121 LQG-------PDPRRRLEDLSRQREPMYAEIADIVIDTGRPNVQFLVNNILMHLGLAPAR 173
Query: 228 SLTP 231
+ P
Sbjct: 174 CIEP 177
>gi|281412407|ref|YP_003346486.1| 3-dehydroquinate synthase [Thermotoga naphthophila RKU-10]
gi|281373510|gb|ADA67072.1| 3-dehydroquinate synthase [Thermotoga naphthophila RKU-10]
Length = 492
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 88/147 (59%), Gaps = 13/147 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVGMMGSGK+T+GK +S VL F D D IE+ +G SV IF+ GE +FR KE E
Sbjct: 3 IFLVGMMGSGKSTIGKRVSEVLDLQFIDMDEEIERR-EGRSVRRIFEEDGEEYFRLKEKE 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
+L++L +VV+TGGG V P N ++K +++L P E L +R+ T++RPLL
Sbjct: 62 LLRELVERDNVVVATGGGVVIDPENRELLKKEKTLFLYAPPEVLMERVT---TENRPLLR 118
Query: 180 QCESGDAYTEALNRLSTLWEERGEAYA 206
E R+ +WE+R + YA
Sbjct: 119 ---------EGKERIREIWEKRKQFYA 136
>gi|212638754|ref|YP_002315274.1| shikimate kinase [Anoxybacillus flavithermus WK1]
gi|212560234|gb|ACJ33289.1| Shikimate kinase [Anoxybacillus flavithermus WK1]
Length = 179
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 89/160 (55%), Gaps = 13/160 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ IYL G MG+GKTTVG+ L VL D D IEQ V G ++ +IF GE FR E
Sbjct: 13 KAIYLTGFMGAGKTTVGRRLGEVLQLPVIDTDAYIEQQV-GKTITKIFAEEGEEAFRAYE 71
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+ L+KL R ++++TGGG V + N ++M++ GI ++L L L +R+A ++RP
Sbjct: 72 RDALKKLPKER-VIITTGGGIVIQEENRQFMREHGIVIYLHCELHELFRRLA--DDETRP 128
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
LL + + +++ L+E+R Y A+ + N
Sbjct: 129 LLMENKQ--------SQIKQLFEQRLAWYREAHMTIDTTN 160
>gi|357059241|ref|ZP_09120085.1| shikimate kinase [Selenomonas infelix ATCC 43532]
gi|355372570|gb|EHG19910.1| shikimate kinase [Selenomonas infelix ATCC 43532]
Length = 173
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 8/151 (5%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G MG+GKT+VG++L+ LG +F D D IE+ G + IFK +GE +FR +E E
Sbjct: 4 VVLIGFMGTGKTSVGRLLATRLGCAFHDLDRKIEEHC-GMPIPVIFKEHGEPYFRAREKE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ + +V++TGGG V N ++K G+ V L + + QR G +RP+L
Sbjct: 63 AVRAAAARTNIVIATGGGTVKDAENVALLRKNGVLVALTADADTILQRTRVRG--ARPVL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANAN 209
++GD A+ R L EER Y +A+
Sbjct: 121 DSADAGDRRA-AVER---LLEERRHLYESAD 147
>gi|319935852|ref|ZP_08010278.1| shikimate kinase [Coprobacillus sp. 29_1]
gi|319809119|gb|EFW05600.1| shikimate kinase [Coprobacillus sp. 29_1]
Length = 165
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 20/165 (12%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GMMG GKTT+ +LS L D D + D T + E+F + E +FRE+ET
Sbjct: 4 IVLIGMMGCGKTTISNLLSKELSRPLIDIDEYLVDKYDMT-IPEMFDI-SEDYFRERETI 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
Q++ L+ ++STGGG + P N +Q+ GI +++D P+E + ++ V +RPLL
Sbjct: 62 CCQEVGLLENYIISTGGGVIKNPKNIEALQRNGIIIYIDRPVELI---LSDVEIAARPLL 118
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYAN-ANARV----SLENIA 218
+ ++L L++ER + Y + N + SLE++
Sbjct: 119 K---------DGPDKLYQLYKERHQRYLDVCNCHIQNTSSLEDVV 154
>gi|415946696|ref|ZP_11556486.1| Bifunctional shikimate kinase/3-dehydroquinate synthase
[Herbaspirillum frisingense GSF30]
gi|407758190|gb|EKF68054.1| Bifunctional shikimate kinase/3-dehydroquinate synthase
[Herbaspirillum frisingense GSF30]
Length = 602
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 81/143 (56%), Gaps = 6/143 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVG+MG+GKTT+G+ L+ L F D D IE G ++ IF++ GE FR +E E
Sbjct: 5 IFLVGLMGAGKTTIGRALAKKLNKRFVDSDHEIEART-GATIPVIFEIEGEESFRRREAE 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGIS-VWLDVPLEALAQRIAAVGTD-SRPL 177
V+++LS +V++TGGGAV R N ++KG + V+L + + QR G D +RPL
Sbjct: 64 VIRELSAQPDIVLATGGGAVLRAENRENLKKGGTVVYLRASINQILQR---TGRDKNRPL 120
Query: 178 LHQCESGDAYTEALNRLSTLWEE 200
L + E + L+ E
Sbjct: 121 LQTADPRRKLEELSRQRDPLYRE 143
>gi|363888760|ref|ZP_09316138.1| hypothetical protein HMPREF9628_00048 [Eubacteriaceae bacterium
CM5]
gi|361967381|gb|EHL20203.1| hypothetical protein HMPREF9628_00048 [Eubacteriaceae bacterium
CM5]
Length = 411
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 104/197 (52%), Gaps = 25/197 (12%)
Query: 23 SLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLG 82
++ A+ L +G + E ++++N + I I ++GM GSGKTT+GK +S + G
Sbjct: 221 AVKAAELFTGKKYDANIEDKIIENLKKNISN------IVIIGMPGSGKTTIGKEISKISG 274
Query: 83 YSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRP 142
D D ++E+ G +++IF+ YGE +FR KE EV+ ++ ++STGGG++
Sbjct: 275 KKSVDIDEIVERET-GKDISQIFRDYGEKYFRRKEKEVISRIGKENNQIISTGGGSILDY 333
Query: 143 INWRYMQKGISV-WLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEER 201
N+ +++ + ++ PL+ LA D RPL SG +N L L+E+R
Sbjct: 334 ENYLALKQNSRIYYIKRPLDKLA-------VDGRPL----SSG-----GINVLEKLYEQR 377
Query: 202 GEAYAN-ANARVSLENI 217
Y + A+ + +NI
Sbjct: 378 HSLYEDFADFEIDNDNI 394
>gi|416893435|ref|ZP_11924623.1| shikimate kinase [Aggregatibacter aphrophilus ATCC 33389]
gi|347813989|gb|EGY30641.1| shikimate kinase [Aggregatibacter aphrophilus ATCC 33389]
Length = 175
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ +L F D D IE+ G + IF + GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQLLSMDFVDTDAEIEERA-GADIGWIFDVEGEAGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+L + +V+STGGGA+ + ++ +GI V+L+ +E QR RP
Sbjct: 64 ERIINELTLRQGIVLSTGGGAILSKESRNHLSARGIVVYLETTVEKQYQRTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL E E L ++ + L+EE
Sbjct: 122 LLQDVEDPRQVLEDLAKVRNPLYEE 146
>gi|170680023|ref|YP_001745633.1| shikimate kinase I [Escherichia coli SMS-3-5]
gi|191167874|ref|ZP_03029678.1| shikimate kinase [Escherichia coli B7A]
gi|191171476|ref|ZP_03033024.1| shikimate kinase [Escherichia coli F11]
gi|193061749|ref|ZP_03042846.1| shikimate kinase [Escherichia coli E22]
gi|193068837|ref|ZP_03049797.1| shikimate kinase [Escherichia coli E110019]
gi|194426975|ref|ZP_03059527.1| shikimate kinase [Escherichia coli B171]
gi|194431141|ref|ZP_03063434.1| shikimate kinase [Shigella dysenteriae 1012]
gi|194439494|ref|ZP_03071569.1| shikimate kinase [Escherichia coli 101-1]
gi|209920842|ref|YP_002294926.1| shikimate kinase I [Escherichia coli SE11]
gi|227883520|ref|ZP_04001325.1| shikimate kinase I [Escherichia coli 83972]
gi|253771783|ref|YP_003034614.1| shikimate kinase I [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|293412806|ref|ZP_06655474.1| conserved hypothetical protein [Escherichia coli B354]
gi|300815416|ref|ZP_07095641.1| shikimate kinase [Escherichia coli MS 107-1]
gi|300822818|ref|ZP_07102954.1| shikimate kinase [Escherichia coli MS 119-7]
gi|300898928|ref|ZP_07117226.1| shikimate kinase [Escherichia coli MS 198-1]
gi|300907470|ref|ZP_07125115.1| shikimate kinase [Escherichia coli MS 84-1]
gi|300919333|ref|ZP_07135844.1| shikimate kinase [Escherichia coli MS 115-1]
gi|300926926|ref|ZP_07142690.1| shikimate kinase [Escherichia coli MS 182-1]
gi|300931081|ref|ZP_07146435.1| shikimate kinase [Escherichia coli MS 187-1]
gi|300937317|ref|ZP_07152158.1| shikimate kinase [Escherichia coli MS 21-1]
gi|300946871|ref|ZP_07161111.1| shikimate kinase [Escherichia coli MS 116-1]
gi|300956715|ref|ZP_07168986.1| shikimate kinase [Escherichia coli MS 175-1]
gi|300974789|ref|ZP_07172733.1| shikimate kinase [Escherichia coli MS 45-1]
gi|300987126|ref|ZP_07178012.1| shikimate kinase [Escherichia coli MS 200-1]
gi|301019597|ref|ZP_07183757.1| shikimate kinase [Escherichia coli MS 69-1]
gi|301023150|ref|ZP_07186954.1| shikimate kinase [Escherichia coli MS 196-1]
gi|301050408|ref|ZP_07197294.1| shikimate kinase [Escherichia coli MS 185-1]
gi|301302265|ref|ZP_07208397.1| shikimate kinase [Escherichia coli MS 124-1]
gi|301329691|ref|ZP_07222440.1| shikimate kinase [Escherichia coli MS 78-1]
gi|301645827|ref|ZP_07245742.1| shikimate kinase [Escherichia coli MS 146-1]
gi|306816272|ref|ZP_07450410.1| shikimate kinase I [Escherichia coli NC101]
gi|309794654|ref|ZP_07689076.1| shikimate kinase [Escherichia coli MS 145-7]
gi|331644089|ref|ZP_08345218.1| shikimate kinase [Escherichia coli H736]
gi|331649186|ref|ZP_08350272.1| shikimate kinase [Escherichia coli M605]
gi|331654966|ref|ZP_08355965.1| shikimate kinase [Escherichia coli M718]
gi|331659678|ref|ZP_08360616.1| shikimate kinase [Escherichia coli TA206]
gi|331664992|ref|ZP_08365893.1| shikimate kinase [Escherichia coli TA143]
gi|331670208|ref|ZP_08371047.1| shikimate kinase [Escherichia coli TA271]
gi|331674882|ref|ZP_08375639.1| shikimate kinase [Escherichia coli TA280]
gi|331679450|ref|ZP_08380120.1| shikimate kinase [Escherichia coli H591]
gi|386593902|ref|YP_006090302.1| shikimate kinase [Escherichia coli DH1]
gi|386605967|ref|YP_006112267.1| shikimate kinase I [Escherichia coli UM146]
gi|386621020|ref|YP_006140600.1| shikimate kinase [Escherichia coli NA114]
gi|386626174|ref|YP_006145902.1| shikimate kinase I [Escherichia coli O7:K1 str. CE10]
gi|386640981|ref|YP_006107779.1| shikimate kinase I [Escherichia coli ABU 83972]
gi|386706631|ref|YP_006170478.1| shikimate kinase I [Escherichia coli P12b]
gi|387618677|ref|YP_006121699.1| shikimate kinase I [Escherichia coli O83:H1 str. NRG 857C]
gi|415863016|ref|ZP_11536377.1| shikimate kinase [Escherichia coli MS 85-1]
gi|415876559|ref|ZP_11542945.1| shikimate kinase [Escherichia coli MS 79-10]
gi|416333947|ref|ZP_11671014.1| Shikimate kinase I [Escherichia coli WV_060327]
gi|416344271|ref|ZP_11678145.1| Shikimate kinase I [Escherichia coli EC4100B]
gi|417087129|ref|ZP_11954176.1| shikimate kinase I [Escherichia coli cloneA_i1]
gi|417116426|ref|ZP_11967287.1| shikimate kinase I [Escherichia coli 1.2741]
gi|417127261|ref|ZP_11974752.1| shikimate kinase I [Escherichia coli 97.0246]
gi|417135754|ref|ZP_11980539.1| shikimate kinase I [Escherichia coli 5.0588]
gi|417141295|ref|ZP_11984208.1| shikimate kinase I [Escherichia coli 97.0259]
gi|417146931|ref|ZP_11987778.1| shikimate kinase I [Escherichia coli 1.2264]
gi|417158286|ref|ZP_11995910.1| shikimate kinase I [Escherichia coli 96.0497]
gi|417165240|ref|ZP_11999302.1| shikimate kinase I [Escherichia coli 99.0741]
gi|417174805|ref|ZP_12004601.1| shikimate kinase I [Escherichia coli 3.2608]
gi|417184283|ref|ZP_12009975.1| shikimate kinase I [Escherichia coli 93.0624]
gi|417195636|ref|ZP_12016013.1| shikimate kinase I [Escherichia coli 4.0522]
gi|417211032|ref|ZP_12021449.1| shikimate kinase I [Escherichia coli JB1-95]
gi|417221585|ref|ZP_12025025.1| shikimate kinase I [Escherichia coli 96.154]
gi|417227892|ref|ZP_12029650.1| shikimate kinase I [Escherichia coli 5.0959]
gi|417240524|ref|ZP_12036714.1| shikimate kinase I [Escherichia coli 9.0111]
gi|417249936|ref|ZP_12041720.1| shikimate kinase I [Escherichia coli 4.0967]
gi|417264060|ref|ZP_12051454.1| shikimate kinase I [Escherichia coli 2.3916]
gi|417267138|ref|ZP_12054499.1| shikimate kinase I [Escherichia coli 3.3884]
gi|417272002|ref|ZP_12059351.1| shikimate kinase I [Escherichia coli 2.4168]
gi|417276103|ref|ZP_12063435.1| shikimate kinase I [Escherichia coli 3.2303]
gi|417284967|ref|ZP_12072258.1| shikimate kinase I [Escherichia coli TW07793]
gi|417291207|ref|ZP_12078488.1| shikimate kinase I [Escherichia coli B41]
gi|417297220|ref|ZP_12084467.1| shikimate kinase I [Escherichia coli 900105 (10e)]
gi|417309888|ref|ZP_12096715.1| Shikimate kinase [Escherichia coli PCN033]
gi|417663950|ref|ZP_12313530.1| shikimate kinase 1 [Escherichia coli AA86]
gi|417866490|ref|ZP_12511531.1| hypothetical protein C22711_3419 [Escherichia coli O104:H4 str.
C227-11]
gi|419912384|ref|ZP_14430839.1| shikimate kinase I [Escherichia coli KD1]
gi|419918684|ref|ZP_14436863.1| shikimate kinase I [Escherichia coli KD2]
gi|419921378|ref|ZP_14439433.1| shikimate kinase I [Escherichia coli 541-15]
gi|419926770|ref|ZP_14444517.1| shikimate kinase I [Escherichia coli 541-1]
gi|419933885|ref|ZP_14451032.1| shikimate kinase I [Escherichia coli 576-1]
gi|419940253|ref|ZP_14457003.1| shikimate kinase I [Escherichia coli 75]
gi|419944095|ref|ZP_14460606.1| shikimate kinase I [Escherichia coli HM605]
gi|419949302|ref|ZP_14465547.1| shikimate kinase I [Escherichia coli CUMT8]
gi|421776643|ref|ZP_16213246.1| shikimate kinase I [Escherichia coli AD30]
gi|422333725|ref|ZP_16414734.1| shikimate kinase 1 [Escherichia coli 4_1_47FAA]
gi|422353283|ref|ZP_16434043.1| shikimate kinase [Escherichia coli MS 117-3]
gi|422360161|ref|ZP_16440798.1| shikimate kinase [Escherichia coli MS 110-3]
gi|422365652|ref|ZP_16446145.1| shikimate kinase [Escherichia coli MS 153-1]
gi|422372332|ref|ZP_16452697.1| shikimate kinase [Escherichia coli MS 16-3]
gi|422374036|ref|ZP_16454330.1| shikimate kinase [Escherichia coli MS 60-1]
gi|422379329|ref|ZP_16459525.1| shikimate kinase [Escherichia coli MS 57-2]
gi|442593947|ref|ZP_21011873.1| Shikimate kinase I [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|442596708|ref|ZP_21014512.1| Shikimate kinase I [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|442604033|ref|ZP_21018881.1| Shikimate kinase I [Escherichia coli Nissle 1917]
gi|110345215|gb|ABG71452.1| shikimate kinase I [Escherichia coli 536]
gi|170517741|gb|ACB15919.1| shikimate kinase [Escherichia coli SMS-3-5]
gi|190902047|gb|EDV61792.1| shikimate kinase [Escherichia coli B7A]
gi|190908103|gb|EDV67694.1| shikimate kinase [Escherichia coli F11]
gi|192932539|gb|EDV85136.1| shikimate kinase [Escherichia coli E22]
gi|192957913|gb|EDV88356.1| shikimate kinase [Escherichia coli E110019]
gi|194414936|gb|EDX31206.1| shikimate kinase [Escherichia coli B171]
gi|194420596|gb|EDX36672.1| shikimate kinase [Shigella dysenteriae 1012]
gi|194421580|gb|EDX37592.1| shikimate kinase [Escherichia coli 101-1]
gi|209914101|dbj|BAG79175.1| shikimate kinase I [Escherichia coli SE11]
gi|227839399|gb|EEJ49865.1| shikimate kinase I [Escherichia coli 83972]
gi|253322827|gb|ACT27429.1| Shikimate kinase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|260447591|gb|ACX38013.1| Shikimate kinase [Escherichia coli DH1]
gi|291468453|gb|EFF10946.1| conserved hypothetical protein [Escherichia coli B354]
gi|299880973|gb|EFI89184.1| shikimate kinase [Escherichia coli MS 196-1]
gi|300297876|gb|EFJ54261.1| shikimate kinase [Escherichia coli MS 185-1]
gi|300306270|gb|EFJ60790.1| shikimate kinase [Escherichia coli MS 200-1]
gi|300316471|gb|EFJ66255.1| shikimate kinase [Escherichia coli MS 175-1]
gi|300357443|gb|EFJ73313.1| shikimate kinase [Escherichia coli MS 198-1]
gi|300399185|gb|EFJ82723.1| shikimate kinase [Escherichia coli MS 69-1]
gi|300400808|gb|EFJ84346.1| shikimate kinase [Escherichia coli MS 84-1]
gi|300410492|gb|EFJ94030.1| shikimate kinase [Escherichia coli MS 45-1]
gi|300413589|gb|EFJ96899.1| shikimate kinase [Escherichia coli MS 115-1]
gi|300417084|gb|EFK00395.1| shikimate kinase [Escherichia coli MS 182-1]
gi|300453480|gb|EFK17100.1| shikimate kinase [Escherichia coli MS 116-1]
gi|300457640|gb|EFK21133.1| shikimate kinase [Escherichia coli MS 21-1]
gi|300461101|gb|EFK24594.1| shikimate kinase [Escherichia coli MS 187-1]
gi|300524584|gb|EFK45653.1| shikimate kinase [Escherichia coli MS 119-7]
gi|300532308|gb|EFK53370.1| shikimate kinase [Escherichia coli MS 107-1]
gi|300842428|gb|EFK70188.1| shikimate kinase [Escherichia coli MS 124-1]
gi|300844203|gb|EFK71963.1| shikimate kinase [Escherichia coli MS 78-1]
gi|301075905|gb|EFK90711.1| shikimate kinase [Escherichia coli MS 146-1]
gi|305850668|gb|EFM51125.1| shikimate kinase I [Escherichia coli NC101]
gi|307555473|gb|ADN48248.1| shikimate kinase I [Escherichia coli ABU 83972]
gi|307628451|gb|ADN72755.1| shikimate kinase I [Escherichia coli UM146]
gi|308121704|gb|EFO58966.1| shikimate kinase [Escherichia coli MS 145-7]
gi|312947938|gb|ADR28765.1| shikimate kinase I [Escherichia coli O83:H1 str. NRG 857C]
gi|315255977|gb|EFU35945.1| shikimate kinase [Escherichia coli MS 85-1]
gi|315286026|gb|EFU45464.1| shikimate kinase [Escherichia coli MS 110-3]
gi|315291663|gb|EFU51019.1| shikimate kinase [Escherichia coli MS 153-1]
gi|315295915|gb|EFU55228.1| shikimate kinase [Escherichia coli MS 16-3]
gi|320197344|gb|EFW71959.1| Shikimate kinase I [Escherichia coli WV_060327]
gi|320199558|gb|EFW74148.1| Shikimate kinase I [Escherichia coli EC4100B]
gi|324009418|gb|EGB78637.1| shikimate kinase [Escherichia coli MS 57-2]
gi|324014613|gb|EGB83832.1| shikimate kinase [Escherichia coli MS 60-1]
gi|324018701|gb|EGB87920.1| shikimate kinase [Escherichia coli MS 117-3]
gi|330909423|gb|EGH37937.1| shikimate kinase 1 [Escherichia coli AA86]
gi|331036383|gb|EGI08609.1| shikimate kinase [Escherichia coli H736]
gi|331041684|gb|EGI13828.1| shikimate kinase [Escherichia coli M605]
gi|331046981|gb|EGI19059.1| shikimate kinase [Escherichia coli M718]
gi|331052893|gb|EGI24926.1| shikimate kinase [Escherichia coli TA206]
gi|331057502|gb|EGI29488.1| shikimate kinase [Escherichia coli TA143]
gi|331062270|gb|EGI34190.1| shikimate kinase [Escherichia coli TA271]
gi|331067791|gb|EGI39189.1| shikimate kinase [Escherichia coli TA280]
gi|331072622|gb|EGI43947.1| shikimate kinase [Escherichia coli H591]
gi|333971521|gb|AEG38326.1| Shikimate kinase I [Escherichia coli NA114]
gi|338768493|gb|EGP23286.1| Shikimate kinase [Escherichia coli PCN033]
gi|341919779|gb|EGT69389.1| hypothetical protein C22711_3419 [Escherichia coli O104:H4 str.
C227-11]
gi|342928649|gb|EGU97371.1| shikimate kinase [Escherichia coli MS 79-10]
gi|349739910|gb|AEQ14616.1| shikimate kinase I [Escherichia coli O7:K1 str. CE10]
gi|355350049|gb|EHF99250.1| shikimate kinase I [Escherichia coli cloneA_i1]
gi|373245157|gb|EHP64629.1| shikimate kinase 1 [Escherichia coli 4_1_47FAA]
gi|383104799|gb|AFG42308.1| shikimate kinase I [Escherichia coli P12b]
gi|386138970|gb|EIG80125.1| shikimate kinase I [Escherichia coli 1.2741]
gi|386144564|gb|EIG91030.1| shikimate kinase I [Escherichia coli 97.0246]
gi|386153608|gb|EIH04897.1| shikimate kinase I [Escherichia coli 5.0588]
gi|386155785|gb|EIH12135.1| shikimate kinase I [Escherichia coli 97.0259]
gi|386162871|gb|EIH24667.1| shikimate kinase I [Escherichia coli 1.2264]
gi|386167036|gb|EIH33556.1| shikimate kinase I [Escherichia coli 96.0497]
gi|386172220|gb|EIH44250.1| shikimate kinase I [Escherichia coli 99.0741]
gi|386177497|gb|EIH54976.1| shikimate kinase I [Escherichia coli 3.2608]
gi|386183845|gb|EIH66592.1| shikimate kinase I [Escherichia coli 93.0624]
gi|386189154|gb|EIH77921.1| shikimate kinase I [Escherichia coli 4.0522]
gi|386195636|gb|EIH89871.1| shikimate kinase I [Escherichia coli JB1-95]
gi|386201387|gb|EII00378.1| shikimate kinase I [Escherichia coli 96.154]
gi|386207227|gb|EII11732.1| shikimate kinase I [Escherichia coli 5.0959]
gi|386212559|gb|EII23003.1| shikimate kinase I [Escherichia coli 9.0111]
gi|386220257|gb|EII36721.1| shikimate kinase I [Escherichia coli 4.0967]
gi|386221769|gb|EII44198.1| shikimate kinase I [Escherichia coli 2.3916]
gi|386229496|gb|EII56851.1| shikimate kinase I [Escherichia coli 3.3884]
gi|386235702|gb|EII67678.1| shikimate kinase I [Escherichia coli 2.4168]
gi|386241354|gb|EII78272.1| shikimate kinase I [Escherichia coli 3.2303]
gi|386250208|gb|EII96375.1| shikimate kinase I [Escherichia coli TW07793]
gi|386253529|gb|EIJ03219.1| shikimate kinase I [Escherichia coli B41]
gi|386260664|gb|EIJ16138.1| shikimate kinase I [Escherichia coli 900105 (10e)]
gi|388389698|gb|EIL51220.1| shikimate kinase I [Escherichia coli KD2]
gi|388391786|gb|EIL53231.1| shikimate kinase I [Escherichia coli KD1]
gi|388397768|gb|EIL58730.1| shikimate kinase I [Escherichia coli 541-15]
gi|388403837|gb|EIL64336.1| shikimate kinase I [Escherichia coli 75]
gi|388408790|gb|EIL69122.1| shikimate kinase I [Escherichia coli 541-1]
gi|388410049|gb|EIL70309.1| shikimate kinase I [Escherichia coli 576-1]
gi|388419267|gb|EIL79014.1| shikimate kinase I [Escherichia coli CUMT8]
gi|388419712|gb|EIL79431.1| shikimate kinase I [Escherichia coli HM605]
gi|408458331|gb|EKJ82119.1| shikimate kinase I [Escherichia coli AD30]
gi|441606220|emb|CCP97153.1| Shikimate kinase I [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|441654816|emb|CCQ00425.1| Shikimate kinase I [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|441715078|emb|CCQ04858.1| Shikimate kinase I [Escherichia coli Nissle 1917]
Length = 225
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 7/160 (4%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L N E R I+LVG MG+GK+T+G+ L+ L F+D D IE+ G V
Sbjct: 43 LTNSLSSTEKMAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRT-GADVGW 101
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEA 162
+F L GE FR++E +V+ +L+ + +V++TGGG+V +R R +G+ V+L+ +E
Sbjct: 102 VFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE- 160
Query: 163 LAQRIAAVGTD-SRPLLHQCESGDAYTEAL-NRLSTLWEE 200
+++A D RPLLH EAL N + L+EE
Sbjct: 161 --KQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEE 198
>gi|170695726|ref|ZP_02886868.1| Shikimate kinase [Burkholderia graminis C4D1M]
gi|170139331|gb|EDT07517.1| Shikimate kinase [Burkholderia graminis C4D1M]
Length = 183
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 76/133 (57%), Gaps = 5/133 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++ VG+MG+GKTTVG+ ++ L FFD D IE G + IF+L GE FR++E
Sbjct: 10 VFFVGLMGAGKTTVGRAIARRLDRPFFDSDHEIEART-GARIPVIFELEGEAGFRDREAS 68
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ +L+ +V++TGGGAV RP N +Q +G+ ++L L R +RPLL
Sbjct: 69 VISELTERDNIVLATGGGAVLRPENRAALQNRGVVIYLRANPHDLWLRTRR--DKNRPLL 126
Query: 179 HQCESGDAYTEAL 191
Q E A EAL
Sbjct: 127 -QTEDPKARLEAL 138
>gi|417280775|ref|ZP_12068075.1| shikimate kinase I [Escherichia coli 3003]
gi|386245104|gb|EII86834.1| shikimate kinase I [Escherichia coli 3003]
Length = 225
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 7/160 (4%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L N E R I+LVG MG+GK+T+G+ L+ L F+D D IE+ G V
Sbjct: 43 LTNSLSSTEKMAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRT-GADVGW 101
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEA 162
+F L GE FR++E +V+ +L+ + +V++TGGG+V +R R +G+ V+L+ +E
Sbjct: 102 VFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE- 160
Query: 163 LAQRIAAVGTD-SRPLLHQCESGDAYTEAL-NRLSTLWEE 200
+++A D RPLLH EAL N + L+EE
Sbjct: 161 --KQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEE 198
>gi|187775714|ref|ZP_02797729.2| shikimate kinase [Escherichia coli O157:H7 str. EC4196]
gi|188024490|ref|ZP_02772158.2| shikimate kinase [Escherichia coli O157:H7 str. EC4113]
gi|189010114|ref|ZP_02804477.2| shikimate kinase [Escherichia coli O157:H7 str. EC4076]
gi|189401883|ref|ZP_02778146.2| shikimate kinase [Escherichia coli O157:H7 str. EC4401]
gi|189402761|ref|ZP_02790741.2| shikimate kinase [Escherichia coli O157:H7 str. EC4486]
gi|189403719|ref|ZP_02784418.2| shikimate kinase [Escherichia coli O157:H7 str. EC4501]
gi|189404657|ref|ZP_02810198.2| shikimate kinase [Escherichia coli O157:H7 str. EC869]
gi|189405484|ref|ZP_02822164.2| shikimate kinase [Escherichia coli O157:H7 str. EC508]
gi|208809649|ref|ZP_03251986.1| shikimate kinase [Escherichia coli O157:H7 str. EC4206]
gi|208821726|ref|ZP_03262046.1| shikimate kinase [Escherichia coli O157:H7 str. EC4042]
gi|209398071|ref|YP_002272824.1| shikimate kinase I [Escherichia coli O157:H7 str. EC4115]
gi|217326078|ref|ZP_03442162.1| shikimate kinase [Escherichia coli O157:H7 str. TW14588]
gi|261224672|ref|ZP_05938953.1| shikimate kinase I [Escherichia coli O157:H7 str. FRIK2000]
gi|291284726|ref|YP_003501544.1| shikimate kinase [Escherichia coli O55:H7 str. CB9615]
gi|416315988|ref|ZP_11659801.1| Shikimate kinase I [Escherichia coli O157:H7 str. 1044]
gi|416320244|ref|ZP_11662796.1| Shikimate kinase I [Escherichia coli O157:H7 str. EC1212]
gi|416326509|ref|ZP_11666718.1| Shikimate kinase I [Escherichia coli O157:H7 str. 1125]
gi|416778015|ref|ZP_11875587.1| shikimate kinase I [Escherichia coli O157:H7 str. G5101]
gi|416789300|ref|ZP_11880431.1| shikimate kinase I [Escherichia coli O157:H- str. 493-89]
gi|416801163|ref|ZP_11885336.1| shikimate kinase I [Escherichia coli O157:H- str. H 2687]
gi|416822368|ref|ZP_11894804.1| shikimate kinase I [Escherichia coli O55:H7 str. USDA 5905]
gi|452968642|ref|ZP_21966869.1| shikimate kinase [Escherichia coli O157:H7 str. EC4009]
gi|187771800|gb|EDU35644.1| shikimate kinase [Escherichia coli O157:H7 str. EC4196]
gi|188018248|gb|EDU56370.1| shikimate kinase [Escherichia coli O157:H7 str. EC4113]
gi|189002475|gb|EDU71461.1| shikimate kinase [Escherichia coli O157:H7 str. EC4076]
gi|189359355|gb|EDU77774.1| shikimate kinase [Escherichia coli O157:H7 str. EC4401]
gi|189364691|gb|EDU83110.1| shikimate kinase [Escherichia coli O157:H7 str. EC4486]
gi|189369739|gb|EDU88155.1| shikimate kinase [Escherichia coli O157:H7 str. EC4501]
gi|189374249|gb|EDU92665.1| shikimate kinase [Escherichia coli O157:H7 str. EC869]
gi|189379942|gb|EDU98358.1| shikimate kinase [Escherichia coli O157:H7 str. EC508]
gi|208729450|gb|EDZ79051.1| shikimate kinase [Escherichia coli O157:H7 str. EC4206]
gi|208741849|gb|EDZ89531.1| shikimate kinase [Escherichia coli O157:H7 str. EC4042]
gi|209159471|gb|ACI36904.1| shikimate kinase [Escherichia coli O157:H7 str. EC4115]
gi|217322299|gb|EEC30723.1| shikimate kinase [Escherichia coli O157:H7 str. TW14588]
gi|290764599|gb|ADD58560.1| Shikimate kinase [Escherichia coli O55:H7 str. CB9615]
gi|320191600|gb|EFW66250.1| Shikimate kinase I [Escherichia coli O157:H7 str. EC1212]
gi|320639672|gb|EFX09266.1| shikimate kinase I [Escherichia coli O157:H7 str. G5101]
gi|320645171|gb|EFX14187.1| shikimate kinase I [Escherichia coli O157:H- str. 493-89]
gi|320650482|gb|EFX18948.1| shikimate kinase I [Escherichia coli O157:H- str. H 2687]
gi|320661458|gb|EFX28873.1| shikimate kinase I [Escherichia coli O55:H7 str. USDA 5905]
gi|326337649|gb|EGD61484.1| Shikimate kinase I [Escherichia coli O157:H7 str. 1044]
gi|326344600|gb|EGD68349.1| Shikimate kinase I [Escherichia coli O157:H7 str. 1125]
Length = 225
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 7/160 (4%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L N E R I+LVG MG+GK+T+G+ L+ L F+D D IE+ G V
Sbjct: 43 LTNSLSSTEKMAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRT-GADVGW 101
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEA 162
+F L GE FR++E +V+ +L+ + +V++TGGG+V +R R +G+ V+L+ +E
Sbjct: 102 VFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE- 160
Query: 163 LAQRIAAVGTD-SRPLLHQCESGDAYTEAL-NRLSTLWEE 200
+++A D RPLLH EAL N + L+EE
Sbjct: 161 --KQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEE 198
>gi|187925570|ref|YP_001897212.1| shikimate kinase [Burkholderia phytofirmans PsJN]
gi|187716764|gb|ACD17988.1| Shikimate kinase [Burkholderia phytofirmans PsJN]
Length = 183
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++ VG+MG+GKTTVG+ ++ L FFD D IE G + IF+L GE FRE+E
Sbjct: 10 VFFVGLMGAGKTTVGRAIARRLDRPFFDSDHEIEART-GARIPVIFELEGEAGFREREAS 68
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ L+ +V++TGGGA+ RP N +Q +G+ ++L L R +RPLL
Sbjct: 69 VISDLTGRDSIVLATGGGAILRPENREALQNRGVVIYLRANPHDLWLRTRR--DKNRPLL 126
Query: 179 HQCESGDAYTEAL 191
Q E A EAL
Sbjct: 127 -QTEDPKARLEAL 138
>gi|406884567|gb|EKD31944.1| hypothetical protein ACD_77C00206G0003 [uncultured bacterium]
Length = 180
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 90/161 (55%), Gaps = 15/161 (9%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I LVG MG+GKTTVG++L+ +F D D I + G S+ IF YGE +FR+ E E
Sbjct: 11 IALVGFMGTGKTTVGRLLAKKCNLTFIDIDECIVEKA-GMSIPLIFSRYGENYFRDMEEE 69
Query: 120 VLQ-KLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPL 177
VL+ KLS M Q ++S GGG VTR N + ++ + I+ L LE +RI + RPL
Sbjct: 70 VLRNKLSNMNQ-IISCGGGVVTRKSNRQVLKNRAITCCLYNSLETSLRRI---NQEIRPL 125
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYAN-ANARVSLENI 217
L+ S D +AL L++ER Y A R+ E++
Sbjct: 126 LN---SPDPAEKAL----KLFKEREALYLEIAQFRIDTESL 159
>gi|419841691|ref|ZP_14365054.1| shikimate kinase [Fusobacterium necrophorum subsp. funduliforme
ATCC 51357]
gi|386904066|gb|EIJ68864.1| shikimate kinase [Fusobacterium necrophorum subsp. funduliforme
ATCC 51357]
Length = 185
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 77/133 (57%), Gaps = 4/133 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MGSGKTTVG++L+ L F D D +I + + S+++IF+ GE +FR+KE E
Sbjct: 18 IALIGFMGSGKTTVGRVLAKQLDMKFVDVDKVI-AAQEKKSISDIFQEKGEEYFRQKERE 76
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ + S +V++TGGG V N + +Q V+LD + + +R+ + RPLL
Sbjct: 77 IILQESTKNNVVIATGGGVVIDNENIKNLQNTCFIVYLDADVSCIYERVK--NSKHRPLL 134
Query: 179 HQCESGDAYTEAL 191
E+ + E L
Sbjct: 135 QNIENLQQHIEIL 147
>gi|39933581|ref|NP_945857.1| shikimate kinase [Rhodopseudomonas palustris CGA009]
gi|81564202|sp|Q6NCG8.1|AROK_RHOPA RecName: Full=Shikimate kinase; Short=SK
gi|39647427|emb|CAE25948.1| putative shikimate kinase [Rhodopseudomonas palustris CGA009]
Length = 203
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Query: 50 EIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYG 109
EI L R + L+GMMG+GK+TVG+ L+ LG F D DT IE S ++ EIF+ +G
Sbjct: 21 EIVAALGDRPVVLIGMMGAGKSTVGRRLALRLGLPFLDADTEIE-SAAAMTIPEIFETHG 79
Query: 110 EGFFREKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIA 168
E FR+ E V+ +L V++TGGGA R R +K IS+WL+ + + +R+
Sbjct: 80 EPHFRDGEARVISRLLDGGTKVLATGGGAFMREETRDRIREKAISMWLEAEADVILRRVK 139
Query: 169 AVGTDSRPLLHQCESGDAYTEALNRLSTLWEE 200
RPLL + + L+ E
Sbjct: 140 RRA--DRPLLKTPDPAGTIARLIAERYPLYRE 169
>gi|387929702|ref|ZP_10132379.1| shikimate kinase [Bacillus methanolicus PB1]
gi|387586520|gb|EIJ78844.1| shikimate kinase [Bacillus methanolicus PB1]
Length = 167
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ IYL+G MGSGKTTVGK + D D I + V+ S+ +IF+ GE +FR E
Sbjct: 2 KSIYLIGFMGSGKTTVGKSFGVKWNWPVIDTDEEIVKKVN-KSINQIFEENGEDYFRHLE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
TE+L++L + R +++TGGG V + N R+M++ GI V+L E + +RI DSRP
Sbjct: 61 TEILKQLPVNRS-IITTGGGIVLKDENRRWMKENGIVVFLYAEPEEIFKRIE--NDDSRP 117
Query: 177 LLH 179
LL
Sbjct: 118 LLK 120
>gi|289664457|ref|ZP_06486038.1| shikimate kinase [Xanthomonas campestris pv. vasculorum NCPPB 702]
Length = 180
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ +VG MG+GK+ +G+ L+ G F D D I + V G+S+ EIF+ +GE FR+ E +
Sbjct: 7 LVMVGPMGAGKSCIGRRLAERFGLEFVDVDQSIVEQV-GSSIPEIFEQHGEARFRQHEAD 65
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
LQ L ++STGGGAV P N R +G V+L V + A R+A +RPLL
Sbjct: 66 TLQALLEQDNKLISTGGGAVLDPNNRQRICARGFVVYLHVSVPAQLTRLAR--DRNRPLL 123
Query: 179 HQCESGDAYTEALNRLSTLWEE 200
+ + A R + L++E
Sbjct: 124 QRADREQALHAMAARRTPLYQE 145
>gi|365838926|ref|ZP_09380181.1| shikimate kinase [Anaeroglobus geminatus F0357]
gi|364566135|gb|EHM43835.1| shikimate kinase [Anaeroglobus geminatus F0357]
Length = 170
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 87/163 (53%), Gaps = 16/163 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ R I ++GM GSGKTT G L+ LG F+D DT +E++ +G ++ E+F + E FR
Sbjct: 1 MKDRNIIIIGMPGSGKTTFGAALAEELGREFYDADTYLEET-EGKTIKELFAV-SEDCFR 58
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWR-YMQKGISVWLDVPLEALAQRIAAVGTD 173
+ ET + L+ +VV+TGGG V RP N Y + GI ++LD +A A V
Sbjct: 59 DAETRTARALACKEGIVVATGGGVVKRPENIAIYKENGIIIFLDRDPADIA---ADVDVS 115
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
RPLL + ++ L+ ER + Y NA+A + N
Sbjct: 116 KRPLLK---------DGPQKVFDLYRERIDTY-NASADYKMAN 148
>gi|350560632|ref|ZP_08929472.1| Shikimate kinase [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349782900|gb|EGZ37183.1| Shikimate kinase [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 184
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ LVG MG+GK+T+G+ L+ VL SF D D IE+ G + IF+ GE FR++ETE
Sbjct: 4 VVLVGPMGAGKSTIGRGLAAVLKRSFVDADAEIEKRT-GVDIPTIFEFEGEEGFRQRETE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPL 160
+L++L +V++TGGGAV RP N +++ ++L VP+
Sbjct: 63 MLRELLERENIVLATGGGAVMRPENRELLKQHCVLYLRVPV 103
>gi|15128455|dbj|BAB62639.1| P0402A09.24 [Oryza sativa Japonica Group]
gi|20804444|dbj|BAB92141.1| P0455C04.18 [Oryza sativa Japonica Group]
Length = 291
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 34/223 (15%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IY+VG + K + K+L+ + Y + + L+E + G F+ + E ETE
Sbjct: 74 IYIVGTDCTAKRNIAKLLANSIIYRYLCSEELLEDVLGGKDALNAFRESDLNGYLEVETE 133
Query: 120 VLQKLSLMRQLVVSTGGGAVTRP-------------------INWRY-------MQKGIS 153
L++L+ M LV+ G GAV IN Y ++ G+S
Sbjct: 134 GLKQLTSMGSLVLCCGDGAVMNSTNLYAAFTHHSLISHIRLLINSSYANSLRGLLRHGVS 193
Query: 154 VWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
+W+D+PLE + + S P D+++EA++R+ +E E Y ++ VS
Sbjct: 194 IWIDIPLELVVNDMLKTQATSDP--------DSFSEAMSRVRQRHDELKERYGVSDITVS 245
Query: 214 LENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEEDDMAIAG 256
++N+A +LG+ + S+T + +E + QIE ++ + M AG
Sbjct: 246 VQNVASQLGYSSIDSVTLEDMVLEIVRQIERLIRAKSMMEAAG 288
>gi|410692782|ref|YP_003623403.1| Shikimate kinase [Thiomonas sp. 3As]
gi|294339206|emb|CAZ87560.1| Shikimate kinase [Thiomonas sp. 3As]
Length = 174
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 62 LVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL 121
++G+MG+GKTTVG+ L+ +G F D D IE+ G ++A +F GE FRE E +
Sbjct: 1 MIGLMGAGKTTVGRTLAQRVGLRFIDSDHEIERE-QGCTIAALFSRLGEAGFREIEARAI 59
Query: 122 QKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
L+ + +V++TGGGAV RP N + + ++G V+L + LA R+ +RPLL Q
Sbjct: 60 DALTQLDGIVLATGGGAVLRPENRKALHERGTVVYLRASPDDLAHRLR--NDRNRPLLQQ 117
Query: 181 CESGDAYTEALNRLSTLWEE 200
++ E L+ E
Sbjct: 118 GDARAKLHELFRVRDPLYRE 137
>gi|456011882|gb|EMF45602.1| Shikimate kinase I [Planococcus halocryophilus Or1]
Length = 186
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 88/161 (54%), Gaps = 11/161 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I +G MG GKTTVGK+L+ L +F D D IE+ + +IF+ YGE FR KE
Sbjct: 11 KSIVCIGFMGVGKTTVGKLLAQKLYRNFVDIDAEIEKEF-AMPIPQIFEHYGEQVFRAKE 69
Query: 118 TEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRP 176
E+++K S ++S GGGA + + I M I ++LD+ E+ RI + TD+RP
Sbjct: 70 KELIEKYSQQPLNIISVGGGAFLQKEIQDICMNNCIVLFLDISWESWKDRIHIL-TDNRP 128
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
LL +L + +L+ ER +Y+ +++ ++N
Sbjct: 129 LLK--------GRSLEDIKSLFLERQNSYSLNHSKFQIDNF 161
>gi|291612585|ref|YP_003522742.1| 3-dehydroquinate synthase [Sideroxydans lithotrophicus ES-1]
gi|291582697|gb|ADE10355.1| 3-dehydroquinate synthase [Sideroxydans lithotrophicus ES-1]
Length = 546
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 5/166 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I LVGMMG+GKTTVGK+L+ LG +F D D I++ G ++ IF + GE FR +E+
Sbjct: 12 IILVGMMGAGKTTVGKLLAKQLGKTFIDSDEEIQRRT-GVTIPHIFDVEGEAGFRVRESG 70
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+Q+L +V++TGGGA+ N M Q G+ V+L + L QR +RPLL
Sbjct: 71 VIQELLKQDDIVLATGGGAILSAQNRPLMKQNGVVVYLKSSVHDLWQRTRH--DHNRPLL 128
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHK 224
E ++ L+ E + + + S++ + +L HK
Sbjct: 129 QTSNPRAKLQELHDQRDPLYTETADIIIH-TGKQSVQILLERLQHK 173
>gi|116688416|ref|YP_834039.1| shikimate kinase [Burkholderia cenocepacia HI2424]
gi|116646505|gb|ABK07146.1| shikimate kinase [Burkholderia cenocepacia HI2424]
Length = 184
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++ VG+MG+GKTTVG+ ++ L +FFD D IE G + IF+L GE FR++ET+
Sbjct: 10 VFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEIEART-GARIPVIFELEGEAGFRDRETQ 68
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ +L+ +V++TGGGAV RP N ++ GI V+L L R +RPLL
Sbjct: 69 VIAELAQRENIVLATGGGAVLRPENRDSLKTNGIVVYLRANPHDLWLRTRK--DKNRPLL 126
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
Q E + RL L+E R Y
Sbjct: 127 -QTE------DPKGRLEALYEVRDPLY 146
>gi|409202515|ref|ZP_11230718.1| shikimate kinase I [Pseudoalteromonas flavipulchra JG1]
Length = 172
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 81/136 (59%), Gaps = 6/136 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ ++ L FFD D IE+ G ++ +F + GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRHIADQLHLEFFDSDQEIERRT-GADISWVFDIEGEEGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS-R 175
V+ L+ M+ +V++TGGG+V ++ + + +GI V+L+ P+E +++A D R
Sbjct: 64 ESVISDLTEMQGIVLATGGGSVISKEVRNKLSARGIVVYLETPIE---KQVARTQRDKRR 120
Query: 176 PLLHQCESGDAYTEAL 191
PLL E E L
Sbjct: 121 PLLQTSEDSRDVLERL 136
>gi|255655854|ref|ZP_05401263.1| shikimate kinase [Clostridium difficile QCD-23m63]
gi|296450865|ref|ZP_06892615.1| shikimate kinase [Clostridium difficile NAP08]
gi|296879132|ref|ZP_06903127.1| shikimate kinase [Clostridium difficile NAP07]
gi|296260336|gb|EFH07181.1| shikimate kinase [Clostridium difficile NAP08]
gi|296429675|gb|EFH15527.1| shikimate kinase [Clostridium difficile NAP07]
Length = 177
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 15/145 (10%)
Query: 62 LVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL 121
L+GM GSGKTT+GK+L+ SF D D I + + S+AE+F GE FR ET+
Sbjct: 11 LIGMPGSGKTTIGKLLAREYNCSFCDMDDYIVK-IAQKSIAELFS-EGEDIFRNYETQAC 68
Query: 122 QKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
++LS+ + V+STGGG + + +N +++ GI +++D P++ + + I +SRPLL
Sbjct: 69 RELSISNKAVISTGGGVIKKDVNMEILKETGIIIFIDRPIQKILEDI---NINSRPLLKN 125
Query: 181 CESGDAYTEALNRLSTLWEERGEAY 205
+ +RL L+ ER Y
Sbjct: 126 GK---------DRLYNLYNERINLY 141
>gi|89099214|ref|ZP_01172092.1| shikimate kinase [Bacillus sp. NRRL B-14911]
gi|89086060|gb|EAR65183.1| shikimate kinase [Bacillus sp. NRRL B-14911]
Length = 166
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 75/121 (61%), Gaps = 5/121 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL+G MG+GKTTVG+ LS VLG D D IE+ G S+ E+F GE +FR+ ET+
Sbjct: 4 IYLIGFMGAGKTTVGRELSCVLGKPAVDMDEEIEKEA-GISIKEMFAQKGEEYFRKLETQ 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L++LS R ++V+TGGG V R N ++ G ++L E +R+AA +RPLL
Sbjct: 63 MLKRLS-ARDIIVTTGGGVVLRKENRDLLKNTGTVLFLHASPEETIKRLAA--DTARPLL 119
Query: 179 H 179
Sbjct: 120 E 120
>gi|437999651|ref|YP_007183384.1| shikimate kinase [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451813274|ref|YP_007449727.1| shikimate kinase [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
gi|429338885|gb|AFZ83307.1| shikimate kinase [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451779243|gb|AGF50123.1| shikimate kinase [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
Length = 211
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 90/177 (50%), Gaps = 23/177 (12%)
Query: 40 EAQVLKNKSQEIE---------PYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDT 90
E+ + ++K+Q IE PY I+L+GMMGSGKTT+G+ LS +L F D D
Sbjct: 14 ESILPESKNQNIESENVVNESLPY--DTPIFLIGMMGSGKTTIGRNLSSILDRKFIDLDL 71
Query: 91 LIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK 150
IE G S+ IF++ GE FR++E VL S V++TGGGAV N ++K
Sbjct: 72 AIESRC-GVSIPTIFEIEGESGFRKREEIVLLDCSNEINTVLATGGGAVLSHSNRDVLKK 130
Query: 151 -GISVWLDVPLEALAQRIAAVGTDS-RPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
GI V+ L+ L QR DS RPLL + A L L E+R Y
Sbjct: 131 RGIVVYFQASLDDLFQR---TNLDSNRPLLSNTDKPYAI------LRELLEQREPIY 178
>gi|205374034|ref|ZP_03226834.1| shikimate kinase [Bacillus coahuilensis m4-4]
Length = 168
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 13/156 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDT-LIEQSVDGTSVAEIFKLYGEGFFREK 116
+ I+L+G MG GKTT+G+ L L S D D ++ Q G + IF +GE +FRE
Sbjct: 2 KPIFLIGFMGVGKTTIGRKLGKELALSVVDTDEEMVNQQ--GVEIPIIFSKHGETYFREL 59
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSR 175
E ++L + ++V+TGGG V N ++M G+ VWLD E + QR++ G +R
Sbjct: 60 EEKILVQCGSKENVIVTTGGGMVLSSQNRKWMHDNGVVVWLDCQFETIWQRVS--GDHNR 117
Query: 176 PLLHQCESGDAYTEALNRLST---LWEERGEAYANA 208
PL +G +Y E +R ++ L+EE N
Sbjct: 118 PL----SNGASYRELFDRYTSRYALYEEAAHFKVNT 149
>gi|381152532|ref|ZP_09864401.1| shikimate kinase [Methylomicrobium album BG8]
gi|380884504|gb|EIC30381.1| shikimate kinase [Methylomicrobium album BG8]
Length = 176
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 86/147 (58%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL+G+MG+GKTT+G+ L+ L F+D D IE++ G ++ IF+ GE FR++E +
Sbjct: 6 IYLIGLMGAGKTTIGRQLAKTLKLPFYDSDKAIEEAT-GVNIPTIFEFEGEAGFRDREQK 64
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+++ L+ M +V++TGGGA+ R N +++ G V+L + + +R RPLL
Sbjct: 65 MIRHLTQMHGIVLATGGGAILREENRHLLKENGFVVYLKCSVGRILERTRK--DTQRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ ++ A RL +L+ ER Y
Sbjct: 123 -RTDNPRA------RLESLYAEREPLY 142
>gi|192288935|ref|YP_001989540.1| shikimate kinase [Rhodopseudomonas palustris TIE-1]
gi|192282684|gb|ACE99064.1| Shikimate kinase [Rhodopseudomonas palustris TIE-1]
Length = 200
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Query: 50 EIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYG 109
EI L R + L+GMMG+GK+TVG+ L+ LG F D DT IE S ++ EIF+ +G
Sbjct: 18 EIVAALGDRPVVLIGMMGAGKSTVGRRLALRLGLPFLDADTEIE-SAAAMTIPEIFETHG 76
Query: 110 EGFFREKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIA 168
E FR+ E V+ +L V++TGGGA R R +K IS+WL+ + + +R+
Sbjct: 77 EPHFRDGEARVISRLLDGGTKVLATGGGAFMREETRDRIREKAISMWLEAEADVILRRVK 136
Query: 169 AVGTDSRPLLHQCESGDAYTEALNRLSTLWEE 200
RPLL + + L+ E
Sbjct: 137 RRA--DRPLLKTPDPAGTIARLIAERYPLYRE 166
>gi|295093407|emb|CBK82498.1| shikimate dehydrogenase [Coprococcus sp. ART55/1]
Length = 461
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 96/172 (55%), Gaps = 13/172 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G MG GKTTVG+ L+ L + D D+ IE G S+ +IF GE +FR+ ET+
Sbjct: 294 VILIGFMGCGKTTVGEALARKLNFDLLDVDSYIEDKA-GCSIKQIFADKGEEYFRQLETD 352
Query: 120 VLQKL-SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPL 177
L++L S + V+STGGG R N +++ G ++LDV E + +R+A G +RPL
Sbjct: 353 TLKELNSRLSHTVISTGGGLPMRQANVDELRRMGRIIYLDVKPEEVVRRLA--GDTTRPL 410
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAY-ANANARVSLENIAVKLGHKDVSS 228
L Q E+ D R+ L +RG Y A A+ V + I + +++SS
Sbjct: 411 L-QGENVD------QRVRKLMGQRGPVYEAAADIIVPVTGIEIDEIVQEISS 455
>gi|167628378|ref|YP_001678877.1| shikimate kinase [Heliobacterium modesticaldum Ice1]
gi|167591118|gb|ABZ82866.1| shikimate kinase [Heliobacterium modesticaldum Ice1]
Length = 200
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 23/198 (11%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G MG+GK+TVG+ L+ LG F D D +E+ V G ++A+IF YGE FR +E +
Sbjct: 18 VVLIGFMGTGKSTVGRRLAARLGCPFVDTDGEVEK-VTGMTIAQIFDRYGEARFRSEERQ 76
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+ +K++ + +VV+TGGG V P N ++ G+ + L+ E + R+ + RPLL
Sbjct: 77 MARKVAALEGVVVATGGGIVLNPENVAALRSSGVLIGLEATAEVIWSRVTR--RNHRPLL 134
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
+ S ++ L + +R YA A+ V D SSL+ I
Sbjct: 135 QKDSS-------VDHLREMMAKRRPYYACADMTV------------DTSSLSVNEIVEVI 175
Query: 239 LEQIEGFLKEEDDMAIAG 256
L + G +E D AG
Sbjct: 176 LTYLRGCSEERQDSRAAG 193
>gi|162447737|ref|YP_001620869.1| shikimate kinase [Acholeplasma laidlawii PG-8A]
gi|161985844|gb|ABX81493.1| shikimate kinase [Acholeplasma laidlawii PG-8A]
Length = 163
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 76/128 (59%), Gaps = 5/128 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL+GM GSGKTT+GK L+ L +F D D IEQ + EIF +YGE FRE ETE
Sbjct: 3 IYLIGMPGSGKTTLGKRLAVELNKTFIDLDQYIEQKY-LLYIDEIFGMYGEEKFREIETE 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
L+ + + V+STGGG V + N + + G+ ++++ P+E + +R+ + + RPLL
Sbjct: 62 SLKDF-IGKDYVISTGGGIVMKKAN-KALMDGLKIYINTPIETIEKRLKS--SYDRPLLK 117
Query: 180 QCESGDAY 187
+ Y
Sbjct: 118 SMTLEELY 125
>gi|376254421|ref|YP_005142880.1| shikimate kinase [Corynebacterium diphtheriae PW8]
gi|376284844|ref|YP_005158054.1| shikimate kinase [Corynebacterium diphtheriae 31A]
gi|376287844|ref|YP_005160410.1| shikimate kinase [Corynebacterium diphtheriae BH8]
gi|376290539|ref|YP_005162786.1| shikimate kinase [Corynebacterium diphtheriae C7 (beta)]
gi|371578359|gb|AEX42027.1| shikimate kinase [Corynebacterium diphtheriae 31A]
gi|371585178|gb|AEX48843.1| shikimate kinase [Corynebacterium diphtheriae BH8]
gi|372103935|gb|AEX67532.1| shikimate kinase [Corynebacterium diphtheriae C7 (beta)]
gi|372117505|gb|AEX69975.1| shikimate kinase [Corynebacterium diphtheriae PW8]
Length = 182
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
Query: 49 QEIEPYLSGRC---IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIF 105
Q +E +SGR + LVG G+GKTT+G+ L+ L S D D LIEQ + G +F
Sbjct: 4 QLLESDVSGRVRPIVVLVGPPGAGKTTIGRRLANALNTSVVDSDVLIEQ-LQGKPCGVVF 62
Query: 106 KLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQ 165
GE FR+ E EV+ +L VVS GGGAVT + ++ I VW+DV +
Sbjct: 63 AELGEPNFRDLEAEVID-FALTTAGVVSLGGGAVTTESVRQKLRAQIVVWVDVSAAEGVR 121
Query: 166 RIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLG 222
R A +SRPLL + Y+E L + ++E + A+ +AR + +A LG
Sbjct: 122 RTAV--ENSRPLLDTTNPLERYSELLAQRRDFYKEVADYRAHTDARSPQQIVADILG 176
>gi|291278864|ref|YP_003495699.1| shikimate kinase [Deferribacter desulfuricans SSM1]
gi|290753566|dbj|BAI79943.1| shikimate kinase [Deferribacter desulfuricans SSM1]
Length = 166
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 81/151 (53%), Gaps = 11/151 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL+G MG+GKTTVGK L+ L F D D LI + G + EIF+ GE FR+ ETE
Sbjct: 3 IYLIGFMGTGKTTVGKALALKLNKKFSDLDDLIVEKT-GKQIVEIFREDGEEEFRKIETE 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL+ ++ VV+TGGG +T N+ M+ G+ + L EA+ +R+ ++RPLL
Sbjct: 62 VLKDINEKDNFVVATGGGVLTTEGNYEIMKSNGVIITLAASPEAIYERLR--NDETRPLL 119
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANAN 209
++ + L ER Y A+
Sbjct: 120 -------MVDNVIDEIKRLMFERAPLYIKAD 143
>gi|218259383|ref|ZP_03475133.1| hypothetical protein PRABACTJOHN_00790 [Parabacteroides johnsonii
DSM 18315]
gi|218225175|gb|EEC97825.1| hypothetical protein PRABACTJOHN_00790 [Parabacteroides johnsonii
DSM 18315]
Length = 173
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 4/127 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L+G MG+GKTTVGK+LS LG SF D D IE T V ++F GE FR+ E
Sbjct: 4 IFLIGYMGAGKTTVGKVLSQQLGLSFIDLDHYIEGRYHKT-VGQLFAERGEEAFRDIERR 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L++++ ++VSTGGGA N +M + G +V+L V +E LA+R+ + +RP+L
Sbjct: 63 MLREVAAFENVLVSTGGGAPCFFDNIEFMNEAGQTVYLKVSVEELAKRLELCKS-TRPIL 121
Query: 179 HQCESGD 185
+ SGD
Sbjct: 122 -KGRSGD 127
>gi|152980219|ref|YP_001355053.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Janthinobacterium sp. Marseille]
gi|151280296|gb|ABR88706.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Janthinobacterium sp. Marseille]
Length = 577
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 86/141 (60%), Gaps = 9/141 (6%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
G I+LVG+MG+GKTTVG+ L+ L F D D IE+ G ++ IF++ GE FR++
Sbjct: 22 GGNIFLVGLMGAGKTTVGRALAKKLNKRFIDSDHEIEERT-GATIPLIFEIEGEASFRQR 80
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSR 175
E EV++ L+ + +V++TGGGAV + Y++ +G ++L + ++ QR + +R
Sbjct: 81 EAEVIRDLTAQQDIVLATGGGAVLNAESRAYLKSRGTVIYLRASVNSIVQRTSH--DKNR 138
Query: 176 PLLHQCESGDAY--TEALNRL 194
PLL ++GD E L+R+
Sbjct: 139 PLL---QTGDPRKTIEELSRI 156
>gi|323702297|ref|ZP_08113963.1| Shikimate kinase [Desulfotomaculum nigrificans DSM 574]
gi|333924357|ref|YP_004497937.1| shikimate kinase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532787|gb|EGB22660.1| Shikimate kinase [Desulfotomaculum nigrificans DSM 574]
gi|333749918|gb|AEF95025.1| Shikimate kinase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 172
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 94/191 (49%), Gaps = 27/191 (14%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MGSGK+TVG L+ LGY F D D IEQ V G +VA+IF +G FR +E
Sbjct: 4 IVLIGFMGSGKSTVGCRLAHRLGYKFVDTDYEIEQ-VTGLTVAQIFAKHGVKRFRGEEAL 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ KL + LV++TGGG V RP N +Q+ G+ + L + + R+ +RPLL
Sbjct: 63 LVSKLMHQQDLVIATGGGLVLRPENVAMLQQNGVLIGLKASAQTICSRVR--NKRTRPLL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
A + L ER AY A V DV LTP E
Sbjct: 121 -------ARGNLRENVERLLRERQAAYDVAEFSV------------DVDQLTPE----EI 157
Query: 239 LEQIEGFLKEE 249
++ I +LKE+
Sbjct: 158 VDIIYHYLKEK 168
>gi|85713793|ref|ZP_01044783.1| shikimate kinase [Nitrobacter sp. Nb-311A]
gi|85699697|gb|EAQ37564.1| shikimate kinase [Nitrobacter sp. Nb-311A]
Length = 196
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L+GR + LVGMMG+GK+T+G+ L+ LG F D D IE + G S+ EIF+ +GE FR
Sbjct: 23 LAGRSLALVGMMGAGKSTIGRRLAARLGMRFVDADAEIELAA-GMSIPEIFETHGEPHFR 81
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEAL 163
+ E V+ +L +V++TGGGA+ R R ++ +S+WL E +
Sbjct: 82 DGEARVIARLLNGGPIVLATGGGAMLRDETRIRLCERAVSIWLKADAEVI 131
>gi|313888953|ref|ZP_07822613.1| shikimate kinase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845126|gb|EFR32527.1| shikimate kinase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 503
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 92/168 (54%), Gaps = 20/168 (11%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM GKT++GK+L+ L F+D D LI + +G ++ EIF+ GE +FR+ E++
Sbjct: 342 ILLIGMPSCGKTSMGKMLAEKLKRDFYDTDDLIVKE-EGKTIPEIFEKKGESYFRDIESK 400
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+ LS +V+++GGG R N Y+ Q + ++L+ LE L T RPL
Sbjct: 401 ILKDLSKRNGIVIASGGGTPLREENRDYISQSSLVIYLNRDLENLE-------TSGRPL- 452
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDV 226
++ L L L+EER E Y A A + ++ I K+ + D+
Sbjct: 453 ---------SKNLENLKKLYEERKEIYE-ALAHIKIDVIEDKIKNLDL 490
>gi|331006526|ref|ZP_08329823.1| Shikimate kinase I [gamma proteobacterium IMCC1989]
gi|330419662|gb|EGG94031.1| Shikimate kinase I [gamma proteobacterium IMCC1989]
Length = 175
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ LVG MG+GK+T+G++L+ L F D D +IE+ G + IF + GE FR++ET
Sbjct: 10 VALVGPMGAGKSTIGRLLANCLSLPFHDSDHVIEEK-SGADIPWIFDVEGEEGFRDRETA 68
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGIS-VWLDVPLEALAQRIAAVGTDSRPLL 178
VL+ L +++V++TGGG V R N + +Q+ + V+L E L QR + RPLL
Sbjct: 69 VLESLLEEQKVVIATGGGIVLREKNRQLLQQADAVVYLKADTERLVQR--TIKDKKRPLL 126
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANAR 211
+ E L + L+ E N ++R
Sbjct: 127 QVDDPRQKILELLAQRDPLYCEVATHTVNTDSR 159
>gi|298369929|ref|ZP_06981245.1| shikimate kinase [Neisseria sp. oral taxon 014 str. F0314]
gi|298281389|gb|EFI22878.1| shikimate kinase [Neisseria sp. oral taxon 014 str. F0314]
Length = 174
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 85/147 (57%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++ VG+MG+GKTT+G+ ++ L F+D D I + G S++ IF++ GE FR +ET
Sbjct: 11 LFFVGLMGAGKTTLGRHIAKTLDRPFYDSDHEICK-CSGVSISTIFEVEGEQGFRSRETA 69
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+KL+ M+ +V+STGGGAV R N ++ G ++L E L +R SRPLL
Sbjct: 70 MLKKLAAMKNIVLSTGGGAVLREENRICLRNNGTVIYLHACPETLLERTRH--DTSRPLL 127
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
Q E+ L +L L++ R Y
Sbjct: 128 -QVEN------PLAKLRELYDSRDAVY 147
>gi|150397763|ref|YP_001328230.1| shikimate kinase [Sinorhizobium medicae WSM419]
gi|150029278|gb|ABR61395.1| Shikimate kinase [Sinorhizobium medicae WSM419]
Length = 192
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + +G+MG+GK+ +G++ + LG F D D IE+ V +++++F YGE FR
Sbjct: 20 LGKRNLVFIGLMGAGKSAIGRLTAQALGVPFVDSDHEIER-VSRMTISDLFATYGEEEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
E VL++L VVSTGGGA + R++++ G++VWL+ L+ L +R+ D
Sbjct: 79 ALEARVLKRLLRSGPRVVSTGGGAYINERSRRHIKRGGLTVWLNAELDVLWERVNK--RD 136
Query: 174 SRPLL 178
+RPLL
Sbjct: 137 TRPLL 141
>gi|453330577|dbj|GAC87323.1| shikimate kinase [Gluconobacter thailandicus NBRC 3255]
Length = 533
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 65 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 124
MMG+GKTTVG+ L+ V G F D D IE++ G ++ EIF +GE +FR E V+Q+L
Sbjct: 1 MMGAGKTTVGRRLAQVYGLPFVDADAEIERAA-GCTIPEIFARHGEAYFRAGERRVIQRL 59
Query: 125 SLMRQLVVSTGGGA----VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
+++TGGGA TR + R+ +SVWL P+ L +R+ G RPLL Q
Sbjct: 60 IKGPPCILATGGGAWMDTQTRQLVRRH---AVSVWLRAPVHVLLRRVH--GRGGRPLLAQ 114
Query: 181 CESGDAYTE 189
D T
Sbjct: 115 GSPEDIMTR 123
>gi|398354903|ref|YP_006400367.1| shikimate kinase AroK [Sinorhizobium fredii USDA 257]
gi|390130229|gb|AFL53610.1| shikimate kinase AroK [Sinorhizobium fredii USDA 257]
Length = 195
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 75/126 (59%), Gaps = 4/126 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + +G+MG+GK+ +G++ + LG F D D IE+ V +V+E+F YGE FR
Sbjct: 20 LGKRNLIFIGLMGAGKSAIGRLTAQALGVPFVDSDHEIER-VSRMTVSELFAAYGEEEFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD 173
E VL++L VVSTGGGA + R ++K G++VWL+ L+ L +R+ D
Sbjct: 79 ALEARVLKRLLRSGPRVVSTGGGAYINERSRRQIRKGGLTVWLNADLDVLWERVNK--RD 136
Query: 174 SRPLLH 179
+RPLL
Sbjct: 137 TRPLLK 142
>gi|148252332|ref|YP_001236917.1| anaerobic benzoate catabolism transcriptional regulator
[Bradyrhizobium sp. BTAi1]
gi|146404505|gb|ABQ33011.1| transcriptional regulator, XRE family with shikimate kinase
activity [Bradyrhizobium sp. BTAi1]
Length = 306
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 94/181 (51%), Gaps = 11/181 (6%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G+ G+GK+T+GK+L+ +G+SF + + IE+ +G SVAEI LYG+ FR E
Sbjct: 129 IALIGLRGAGKSTLGKMLAERIGWSFVELNKEIERQ-NGLSVAEIIALYGQEGFRRMEQA 187
Query: 120 VLQKLSLMRQL-VVSTGGGAVTRPINWRYMQKGI-SVWLDVPLEALAQRIAAVGTDSRPL 177
LQ+L ++L V++TGGG V+ P+ + + ++WL E R+ G D RP+
Sbjct: 188 ALQQLLARKELMVLATGGGIVSEPVTFDLILNAFYTIWLKAKPEEHMARVRGQG-DLRPM 246
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIE 237
A+ L + R YA ANA V + V+ +S + IA E
Sbjct: 247 ADD-------RSAMAELRNILVSREPLYARANAVVDTAGLTVEAAAARLSEVVQPVIANE 299
Query: 238 A 238
A
Sbjct: 300 A 300
>gi|25288009|pir||H91157 shikimate kinase I [imported] - Escherichia coli (strain O157:H7,
substrain RIMD 0509952)
gi|25288011|pir||F86003 shikimate kinase I [imported] - Escherichia coli (strain O157:H7,
substrain EDL933)
gi|12518013|gb|AAG58490.1|AE005561_3 shikimate kinase I [Escherichia coli O157:H7 str. EDL933]
gi|13363706|dbj|BAB37655.1| shikimate kinase I [Escherichia coli O157:H7 str. Sakai]
gi|209756648|gb|ACI76636.1| shikimate kinase I [Escherichia coli]
gi|209756650|gb|ACI76637.1| shikimate kinase I [Escherichia coli]
gi|209756652|gb|ACI76638.1| shikimate kinase I [Escherichia coli]
gi|209756654|gb|ACI76639.1| shikimate kinase I [Escherichia coli]
gi|209756656|gb|ACI76640.1| shikimate kinase I [Escherichia coli]
Length = 240
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 7/160 (4%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L N E R I+LVG MG+GK+T+G+ L+ L F+D D IE+ G V
Sbjct: 58 LTNSLSSTEKMAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRT-GADVGW 116
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEA 162
+F L GE FR++E +V+ +L+ + +V++TGGG+V +R R +G+ V+L+ +E
Sbjct: 117 VFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE- 175
Query: 163 LAQRIAAVGTD-SRPLLHQCESGDAYTEAL-NRLSTLWEE 200
+++A D RPLLH EAL N + L+EE
Sbjct: 176 --KQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEE 213
>gi|414341302|ref|YP_006982823.1| shikimate kinase [Gluconobacter oxydans H24]
gi|411026637|gb|AFV99891.1| shikimate kinase [Gluconobacter oxydans H24]
Length = 533
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 65 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 124
MMG+GKTTVG+ L+ V G F D D IE++ G ++ EIF +GE +FR E V+Q+L
Sbjct: 1 MMGAGKTTVGRRLAQVYGLPFVDADAEIERAA-GCTIPEIFARHGEAYFRAGERRVIQRL 59
Query: 125 SLMRQLVVSTGGGA----VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
+++TGGGA TR + R+ +SVWL P+ L +R+ G RPLL Q
Sbjct: 60 IKGPPCILATGGGAWMDTQTRQLVRRH---AVSVWLRAPVHVLLRRVH--GRGGRPLLAQ 114
Query: 181 CESGDAYTE 189
D T
Sbjct: 115 GSPEDIMTR 123
>gi|372272601|ref|ZP_09508649.1| shikimate kinase [Marinobacterium stanieri S30]
Length = 167
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 78/127 (61%), Gaps = 5/127 (3%)
Query: 66 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 125
MG+GK+T+G++LS LG FFD D IE GT++ IF + GE FR++E + + +L+
Sbjct: 1 MGAGKSTIGRLLSQELGLEFFDSDREIEARA-GTNIPWIFDVEGEKGFRQREEQAIDELT 59
Query: 126 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 184
++++TGGGAV R N +++Q +G+ V+L +E +R A +RPLL Q E+
Sbjct: 60 QRDNIILATGGGAVLREANRKHLQSRGLVVYLHTSIEQQLERTAK--DRNRPLL-QTENP 116
Query: 185 DAYTEAL 191
A E L
Sbjct: 117 RAVLEKL 123
>gi|91212862|ref|YP_542848.1| shikimate kinase I [Escherichia coli UTI89]
gi|237703117|ref|ZP_04533598.1| shikimic acid kinase I [Escherichia sp. 3_2_53FAA]
gi|293406968|ref|ZP_06650892.1| aroK [Escherichia coli FVEC1412]
gi|293416791|ref|ZP_06659428.1| shikimate kinase [Escherichia coli B185]
gi|298382710|ref|ZP_06992305.1| shikimate kinase 1 [Escherichia coli FVEC1302]
gi|332281934|ref|ZP_08394347.1| shikimic acid kinase I [Shigella sp. D9]
gi|344915336|ref|NP_709163.4| shikimate kinase I [Shigella flexneri 2a str. 301]
gi|386282943|ref|ZP_10060583.1| shikimate kinase 1 [Escherichia sp. 4_1_40B]
gi|387831264|ref|YP_003351201.1| shikimate kinase I [Escherichia coli SE15]
gi|422751228|ref|ZP_16805137.1| shikimate kinase [Escherichia coli H252]
gi|422756960|ref|ZP_16810782.1| shikimate kinase [Escherichia coli H263]
gi|422763743|ref|ZP_16817497.1| shikimate kinase [Escherichia coli E1167]
gi|422768820|ref|ZP_16822544.1| shikimate kinase [Escherichia coli E1520]
gi|422773486|ref|ZP_16827170.1| shikimate kinase [Escherichia coli E482]
gi|422778062|ref|ZP_16831713.1| shikimate kinase [Escherichia coli H120]
gi|422784089|ref|ZP_16836872.1| shikimate kinase [Escherichia coli TW10509]
gi|422788718|ref|ZP_16841453.1| shikimate kinase [Escherichia coli H489]
gi|422793439|ref|ZP_16846135.1| shikimate kinase [Escherichia coli TA007]
gi|422801310|ref|ZP_16849806.1| shikimate kinase [Escherichia coli M863]
gi|427806583|ref|ZP_18973650.1| shikimate kinase I [Escherichia coli chi7122]
gi|427811171|ref|ZP_18978236.1| shikimate kinase I [Escherichia coli]
gi|26110413|gb|AAN82598.1|AE016768_16 Shikimate kinase I [Escherichia coli CFT073]
gi|606324|gb|AAA58187.1| shikimic acid kinase I [Escherichia coli str. K-12 substr. MG1655]
gi|30043588|gb|AAP19308.1| shikimate kinase I [Shigella flexneri 2a str. 2457T]
gi|56383875|gb|AAN44870.2| shikimate kinase I [Shigella flexneri 2a str. 301]
gi|91074436|gb|ABE09317.1| shikimate kinase I [Escherichia coli UTI89]
gi|110616770|gb|ABF05437.1| Shikimate kinase [Shigella flexneri 5 str. 8401]
gi|115514782|gb|ABJ02857.1| shikimate kinase [Escherichia coli APEC O1]
gi|226902381|gb|EEH88640.1| shikimic acid kinase I [Escherichia sp. 3_2_53FAA]
gi|281180421|dbj|BAI56751.1| shikimate kinase I [Escherichia coli SE15]
gi|291425779|gb|EFE98813.1| aroK [Escherichia coli FVEC1412]
gi|291431367|gb|EFF04352.1| shikimate kinase [Escherichia coli B185]
gi|298276546|gb|EFI18064.1| shikimate kinase 1 [Escherichia coli FVEC1302]
gi|323934620|gb|EGB31020.1| shikimate kinase [Escherichia coli E1520]
gi|323939391|gb|EGB35602.1| shikimate kinase [Escherichia coli E482]
gi|323944388|gb|EGB40463.1| shikimate kinase [Escherichia coli H120]
gi|323950047|gb|EGB45930.1| shikimate kinase [Escherichia coli H252]
gi|323954673|gb|EGB50455.1| shikimate kinase [Escherichia coli H263]
gi|323959610|gb|EGB55262.1| shikimate kinase [Escherichia coli H489]
gi|323966200|gb|EGB61636.1| shikimate kinase [Escherichia coli M863]
gi|323969988|gb|EGB65263.1| shikimate kinase [Escherichia coli TA007]
gi|323974809|gb|EGB69921.1| shikimate kinase [Escherichia coli TW10509]
gi|324116417|gb|EGC10336.1| shikimate kinase [Escherichia coli E1167]
gi|332104286|gb|EGJ07632.1| shikimic acid kinase I [Shigella sp. D9]
gi|386119944|gb|EIG68581.1| shikimate kinase 1 [Escherichia sp. 4_1_40B]
gi|412964765|emb|CCK48694.1| shikimate kinase I [Escherichia coli chi7122]
gi|412971350|emb|CCJ46007.1| shikimate kinase I [Escherichia coli]
Length = 240
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 7/160 (4%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L N E R I+LVG MG+GK+T+G+ L+ L F+D D IE+ G V
Sbjct: 58 LTNSLSSTEKMAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRT-GADVGW 116
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEA 162
+F L GE FR++E +V+ +L+ + +V++TGGG+V +R R +G+ V+L+ +E
Sbjct: 117 VFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE- 175
Query: 163 LAQRIAAVGTD-SRPLLHQCESGDAYTEAL-NRLSTLWEE 200
+++A D RPLLH EAL N + L+EE
Sbjct: 176 --KQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEE 213
>gi|298245126|ref|ZP_06968932.1| 3-dehydroquinate synthase [Ktedonobacter racemifer DSM 44963]
gi|297552607|gb|EFH86472.1| 3-dehydroquinate synthase [Ktedonobacter racemifer DSM 44963]
Length = 554
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 86/163 (52%), Gaps = 19/163 (11%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R ++L+G+ GSGK+TVG++L+ L D D LIEQ +G + EIF +GE +FRE E
Sbjct: 2 RHVFLIGLSGSGKSTVGRLLAQELRRPLLDIDALIEQE-EGMGIPEIFTRHGEAYFRECE 60
Query: 118 TEVLQKLSLMRQ-LVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDS- 174
VL +++ + +V+TGGG V R N R M ++G+ V+L E +R+ A T S
Sbjct: 61 RRVLARVAQNEEGAIVATGGGLVAREENRRLMAERGVRVYLQTEPEVALERLRAQHTHSL 120
Query: 175 --------RPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
RPLL A + L L L+ R Y A+
Sbjct: 121 AKSTSPEIRPLL-------AGPDPLATLRNLYTTRRAWYEEAD 156
>gi|124268292|ref|YP_001022296.1| shikimate kinase [Methylibium petroleiphilum PM1]
gi|124261067|gb|ABM96061.1| shikimate kinase [Methylibium petroleiphilum PM1]
Length = 184
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ LVG+ GSGK++VG++L+ LG SF D DT+IEQ + G + F+ GEG FR+ E +
Sbjct: 3 LALVGLPGSGKSSVGRVLARKLGVSFTDSDTVIEQRI-GEPIRSYFEREGEGRFRDLEQQ 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTDSRPLL 178
V+ +L R V++TGGGAV R +N R + + +V +L E L +R+ RPLL
Sbjct: 62 VIGELCASRLGVLATGGGAVLREVNRRVLHEDCTVLYLRSSPEELHRRLRH--DTQRPLL 119
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ RL L+ ER Y
Sbjct: 120 Q-------VKDPRARLQQLYRERDPLY 139
>gi|317052000|ref|YP_004113116.1| Shikimate kinase [Desulfurispirillum indicum S5]
gi|316947084|gb|ADU66560.1| Shikimate kinase [Desulfurispirillum indicum S5]
Length = 168
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 11/162 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I L G MGSGK+TVG+ILS L F D D +IE+ G + +IF + E +FRE E
Sbjct: 3 RHIILSGFMGSGKSTVGRILSRRLSLPFHDVDDVIEKQT-GMKIMDIFSQHSEAYFRELE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRP 176
T VL+ + V++TGGG + P N Q+G+ +L + L +R+ + RP
Sbjct: 62 TRVLRDILATPPSVIATGGGTLMEPENLTLSKQQGVLFYLSASAKTLHERVR--HSQHRP 119
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 218
L+ + S +A+ + L E R Y + + +N++
Sbjct: 120 LVKKHSSLEAF-------ARLLEARIPFYKKCDYIIDADNMS 154
>gi|240949522|ref|ZP_04753862.1| shikimate kinase [Actinobacillus minor NM305]
gi|240296095|gb|EER46756.1| shikimate kinase [Actinobacillus minor NM305]
Length = 173
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 86/145 (59%), Gaps = 6/145 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ +LG FFD D++IE+ G + IF + GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQMLGMEFFDSDSVIEERA-GADIDWIFDVEGEAGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ + +V+STGGGAV N + +GI ++L+ ++ +R RP
Sbjct: 64 ERIINELTQGQGVVLSTGGGAVLSKDNRNMLSARGIVIYLETTIDKQFERTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL Q E E L ++ + L+EE
Sbjct: 122 LL-QTEDPRKTLEELAKIRNPLYEE 145
>gi|189346472|ref|YP_001943001.1| shikimate kinase [Chlorobium limicola DSM 245]
gi|238692217|sp|B3EIT1.1|AROK_CHLL2 RecName: Full=Shikimate kinase; Short=SK
gi|189340619|gb|ACD90022.1| Shikimate kinase [Chlorobium limicola DSM 245]
Length = 199
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 90/156 (57%), Gaps = 7/156 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L G GSGK+T+G +L+ LGY F D D IE S G S+ +IF GE FR E E
Sbjct: 7 IFLTGFSGSGKSTIGPLLANSLGYGFIDLDQEIE-SKAGKSITKIFAEEGEQTFRNLELE 65
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
L++L+ ++LVVS GGG + +R +++ G V+L +LA+R+ TD RPLL
Sbjct: 66 TLRQLTGKKELVVSLGGGVLENNDCYRLIRENGTLVYLKSSPRSLARRLCN-KTD-RPLL 123
Query: 179 HQCESGDAYT--EALNRLSTLWEERGEAYANANARV 212
+ E G + E ++ST+ E+R YA A+ V
Sbjct: 124 -KGEHGTRLSREEIELKISTILEKREPRYATADLSV 158
>gi|319940609|ref|ZP_08014952.1| hypothetical protein HMPREF9464_00171 [Sutterella wadsworthensis
3_1_45B]
gi|319805975|gb|EFW02733.1| hypothetical protein HMPREF9464_00171 [Sutterella wadsworthensis
3_1_45B]
Length = 509
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM G GKTT+GK ++ L F D D L+E+ V G S I++ GE +FR+ E+E
Sbjct: 353 IVLIGMPGCGKTTIGKCVAARLLRPFIDLDALVERRV-GKSSERIYREDGEEYFRDFESE 411
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPL 177
++++LS LV+STGGGA RP N R G WL PL+ L+ T RPL
Sbjct: 412 IIKELSGRHGLVISTGGGACLRPENRMRLALNGTFYWLQRPLDHLS-------TYQRPL 463
>gi|261856528|ref|YP_003263811.1| shikimate kinase [Halothiobacillus neapolitanus c2]
gi|261836997|gb|ACX96764.1| Shikimate kinase [Halothiobacillus neapolitanus c2]
Length = 167
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G MG+GK+T+GK+L+ + FFD D IE G ++ IF++ GE FR++E
Sbjct: 4 IILIGPMGAGKSTIGKLLAHSMNLPFFDSDKEIEHRT-GATIPLIFEIEGESGFRDREVA 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWR-YMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ +L+ V++TGGGA+ RP N + ++G V+L ++ A+R A RPLL
Sbjct: 63 VIDELTQTSGWVLATGGGAILRPENRAVFTERGFVVYLHATVQQQAERTAM--DTQRPLL 120
Query: 179 HQCESGDAYTEALNRLSTLWEE 200
+ E + + L+ E
Sbjct: 121 QTKDRVGKLNELMTKREPLYRE 142
>gi|94312938|ref|YP_586147.1| shikimate kinase I [Cupriavidus metallidurans CH34]
gi|93356790|gb|ABF10878.1| shikimate kinase I [Cupriavidus metallidurans CH34]
Length = 196
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 56 SGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFRE 115
SG ++ +G MG+GKTT+G+ ++ LG FFD D IE G +A IF+L GE FR+
Sbjct: 19 SGDNLFFIGFMGAGKTTIGRAVAHELGRPFFDTDHEIETRC-GVRIATIFELEGEEGFRQ 77
Query: 116 KETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPL 160
+E+ VL +L+ +V++TGGGAV RP N ++ +G V+LD L
Sbjct: 78 RESRVLDELTQRSGIVLATGGGAVLRPENRAMLRARGQVVYLDASL 123
>gi|398793577|ref|ZP_10553870.1| shikimate kinase [Pantoea sp. YR343]
gi|398210362|gb|EJM97011.1| shikimate kinase [Pantoea sp. YR343]
Length = 174
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL+G G GKTTVGK LS LGY+F D D ++ + SVAEI G FR +ETE
Sbjct: 5 IYLIGARGCGKTTVGKALSQALGYAFNDTDHYLQLTTQ-RSVAEIVASEGWDSFRARETE 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRI 167
L+ ++ V++TGGG V +N R+M++ G +WL+ P E LA R+
Sbjct: 64 SLRAVT-APNTVIATGGGMVLAEVNCRFMREHGQVIWLNAPSEVLADRL 111
>gi|335039438|ref|ZP_08532602.1| Shikimate kinase [Caldalkalibacillus thermarum TA2.A1]
gi|334180672|gb|EGL83273.1| Shikimate kinase [Caldalkalibacillus thermarum TA2.A1]
Length = 180
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 77/129 (59%), Gaps = 11/129 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+CI + G MG+GK+TVG+ L+ + + D DT IE+ + + +IFK YGE +FR+ E
Sbjct: 2 KCISIWGFMGAGKSTVGRALARTYAWKWLDSDTEIEKQ-EQLKIPDIFKRYGEEYFRQLE 60
Query: 118 TEVLQKLSLMRQ--------LVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIA 168
T L+ L Q LV++TGGG R N ++++K GIS++L VP + +A+R+
Sbjct: 61 TRFLENLWNRMQSEPQASEWLVLTTGGGMPLREENRQWLKKLGISIYLHVPFDTIAKRLN 120
Query: 169 AVGTDSRPL 177
+ RPL
Sbjct: 121 RRDS-QRPL 128
>gi|225077282|ref|ZP_03720481.1| hypothetical protein NEIFLAOT_02341 [Neisseria flavescens
NRL30031/H210]
gi|224951426|gb|EEG32635.1| hypothetical protein NEIFLAOT_02341 [Neisseria flavescens
NRL30031/H210]
Length = 173
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G+MG+GKTT+GK L+ + F+D D I S G S+ IF++ GE FR +ET
Sbjct: 11 LILIGLMGAGKTTLGKQLAQMFECPFYDSDYEICTS-SGVSIPTIFEMEGEEGFRNRETN 69
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+KL+ R +V+STGGG+V R N + + Q G V+L E L +R +RPLL
Sbjct: 70 MLKKLASRRNIVLSTGGGSVLRSENRQILRQNGTVVYLHASPETLLERTRY--DSNRPLL 127
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
L +L L+++R Y
Sbjct: 128 Q-------VANPLAKLQELYDQRDTLY 147
>gi|91762411|ref|ZP_01264376.1| shikimate kinase [Candidatus Pelagibacter ubique HTCC1002]
gi|91718213|gb|EAS84863.1| shikimate kinase [Candidatus Pelagibacter ubique HTCC1002]
Length = 170
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 88/165 (53%), Gaps = 12/165 (7%)
Query: 56 SGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFRE 115
S + + +GMMGSGK+++G ++S L F D D LIE+ G +++EIFK+ GE +FR
Sbjct: 3 SNKNLVFLGMMGSGKSSIGAMVSKKLNIPFIDIDNLIEEHA-GMTISEIFKVNGEAYFRN 61
Query: 116 KETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ++ K +++VVS GGG+ + I ++ S WLD L +RI G+
Sbjct: 62 LEEKITIKSLKHKKVVVSLGGGSFINDKIRKDILKNHFSFWLDWDDLILIKRIK--GSKK 119
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 219
RPL S D +A + +R + Y+ AN +++ + +
Sbjct: 120 RPL--ASNSTDLEIKA------IINKRKKVYSKANFKINCNKLTI 156
>gi|319639387|ref|ZP_07994137.1| shikimate kinase [Neisseria mucosa C102]
gi|317399282|gb|EFV79953.1| shikimate kinase [Neisseria mucosa C102]
Length = 173
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G+MG+GKTT+GK L+ + F+D D I S G S+ IF++ GE FR +ET
Sbjct: 11 LILIGLMGAGKTTLGKQLAQMFECPFYDSDYEICTS-SGVSIPTIFEMEGEEGFRNRETN 69
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+KL+ R +V+STGGG+V R N + + Q G V+L E L +R +RPLL
Sbjct: 70 MLKKLASRRNIVLSTGGGSVLRSENRQILRQNGTVVYLHASPETLLERTRY--DSNRPLL 127
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
L +L L+++R Y
Sbjct: 128 Q-------VANPLAKLQELYDQRDTLY 147
>gi|302877408|ref|YP_003845972.1| shikimate kinase [Gallionella capsiferriformans ES-2]
gi|302580197|gb|ADL54208.1| Shikimate kinase [Gallionella capsiferriformans ES-2]
Length = 187
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 21/185 (11%)
Query: 46 NKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIF 105
N +++I+ SG I LVGMMGSGKTT+G+IL+ L F D D I Q G ++ IF
Sbjct: 7 NSTRKIQ---SGNLI-LVGMMGSGKTTMGRILARHLNKVFVDSDEEI-QFRTGVTIPHIF 61
Query: 106 KLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALA 164
+ GE FR++ET+ L L + LV++TGGGAV P N M + GI ++L + L
Sbjct: 62 DVEGEPGFRQRETDALAALVVRNDLVLATGGGAVLAPENRAMMSENGIVIYLKANVHDLW 121
Query: 165 QRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHK 224
R +RPLL ++G+ + +L+ L ++R Y + +I + G +
Sbjct: 122 LRTR--NDRNRPLL---QTGNVHA----KLAELLQQRNALYQ------QVADIVMPTGRQ 166
Query: 225 DVSSL 229
V +L
Sbjct: 167 SVHAL 171
>gi|423342310|ref|ZP_17320024.1| shikimate kinase [Parabacteroides johnsonii CL02T12C29]
gi|409218224|gb|EKN11196.1| shikimate kinase [Parabacteroides johnsonii CL02T12C29]
Length = 173
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 89/150 (59%), Gaps = 7/150 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L+G MG+GKTTVGK+LS LG SF D D IE T V ++F GE FR+ E
Sbjct: 4 IFLIGYMGAGKTTVGKVLSQQLGLSFIDLDHYIEGRYHKT-VGQLFAERGEEAFRDIERR 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L++++ ++VSTGGGA N +M + G +V+L V +E LA+R+ + +RP+L
Sbjct: 63 MLREVAAFEDVLVSTGGGAPCFFDNIEFMNEAGQTVYLKVSVEELAKRLELCKS-TRPIL 121
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANA 208
+ SGD E + ++ E+R Y+ A
Sbjct: 122 -KGRSGD---ELKSFIAESLEKREPFYSKA 147
>gi|413959426|ref|ZP_11398662.1| shikimate kinase [Burkholderia sp. SJ98]
gi|413940383|gb|EKS72346.1| shikimate kinase [Burkholderia sp. SJ98]
Length = 181
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 5/133 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+ VG+MG+GKTTVG+ ++ L SF D D IE G + I++L GE FR++E
Sbjct: 10 IFFVGLMGAGKTTVGRAVARRLQRSFIDSDHEIEART-GARIPVIWELEGEAGFRQREAN 68
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ +LS +V++TGGGAV RP N +++ +GI ++L L QR +RPLL
Sbjct: 69 VIDELSQRDGIVLATGGGAVLRPDNREHLKNRGIVIYLRANPHDLWQRTRR--DKNRPLL 126
Query: 179 HQCESGDAYTEAL 191
Q E EAL
Sbjct: 127 -QTEDPRGKLEAL 138
>gi|187476587|ref|YP_784611.1| shikimate kinase [Bordetella avium 197N]
gi|114151679|sp|Q2L1Z2.1|AROK_BORA1 RecName: Full=Shikimate kinase; Short=SK
gi|115421173|emb|CAJ47661.1| shikimate kinase I [Bordetella avium 197N]
Length = 209
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 83/142 (58%), Gaps = 4/142 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVGMMG+GKTT+G+ L+ LG F D D +E G V IF++ GE FR++E+
Sbjct: 40 IFLVGMMGAGKTTIGRGLARALGREFIDLDHELEARC-GVRVPVIFEIEGEAGFRKREST 98
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
LQ+ + R ++++TGGGAV N R + ++GI ++L ++ L +R + +RPLL
Sbjct: 99 ALQECTQRRGIILATGGGAVLAEENRRLLRERGIVLYLRASVDELFRRTSR--DRNRPLL 156
Query: 179 HQCESGDAYTEALNRLSTLWEE 200
+ + + + L++E
Sbjct: 157 ATADPRGTLNDLMIKREPLYKE 178
>gi|377821847|ref|YP_004978218.1| shikimate kinase [Burkholderia sp. YI23]
gi|357936682|gb|AET90241.1| shikimate kinase [Burkholderia sp. YI23]
Length = 181
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 5/133 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+ VG+MG+GKTTVG+ ++ L SF D D IE G + I++L GE FR++E
Sbjct: 10 IFFVGLMGAGKTTVGRAVARRLQRSFIDSDLEIEART-GARIPVIWELEGEAGFRQREAN 68
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ +LS +V++TGGGAV RP N +++ +GI ++L L QR +RPLL
Sbjct: 69 VIDELSQRNGIVLATGGGAVLRPENREHLKNRGIVIYLRANPHDLWQRTRR--DKNRPLL 126
Query: 179 HQCESGDAYTEAL 191
Q E EAL
Sbjct: 127 -QTEDPRGKLEAL 138
>gi|433654887|ref|YP_007298595.1| shikimate kinase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433293076|gb|AGB18898.1| shikimate kinase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 171
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 84/161 (52%), Gaps = 11/161 (6%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L G M +GK+ VGK ++ +L + + D D LIE+ + G + EIF YGE +FR E
Sbjct: 4 IALTGFMATGKSVVGKKVADILSFGYIDTDCLIEK-ICGMKIPEIFDKYGEKYFRGLEKV 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+++ S ++ V+STGGG V P N ++K G+ + L E + + + DSRP+L
Sbjct: 63 AVKRASRLKNHVISTGGGVVLNPSNIVQLRKHGVVICLKARPEIILRNVG--DADSRPIL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 219
A + R+ L +ER Y A+ + + + +
Sbjct: 121 -------ATDDVYGRIKMLLDERQHFYEFADYTIDISEMGI 154
>gi|379715439|ref|YP_005303776.1| shikimate kinase [Corynebacterium pseudotuberculosis 316]
gi|387138740|ref|YP_005694719.1| shikimate kinase [Corynebacterium pseudotuberculosis CIP 52.97]
gi|387140736|ref|YP_005696714.1| shikimate kinase [Corynebacterium pseudotuberculosis 1/06-A]
gi|389850493|ref|YP_006352728.1| shikimate kinase [Corynebacterium pseudotuberculosis 258]
gi|392400677|ref|YP_006437277.1| shikimate kinase [Corynebacterium pseudotuberculosis Cp162]
gi|349735218|gb|AEQ06696.1| Shikimate kinase [Corynebacterium pseudotuberculosis CIP 52.97]
gi|355392527|gb|AER69192.1| Shikimate kinase [Corynebacterium pseudotuberculosis 1/06-A]
gi|377654145|gb|AFB72494.1| Shikimate kinase [Corynebacterium pseudotuberculosis 316]
gi|388247799|gb|AFK16790.1| Shikimate kinase [Corynebacterium pseudotuberculosis 258]
gi|390531755|gb|AFM07484.1| Shikimate kinase [Corynebacterium pseudotuberculosis Cp162]
Length = 198
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ LVG G+GKTTVGK L+ L +F D D LIEQS G S +F GE FR+ E
Sbjct: 32 VVLVGPPGAGKTTVGKRLANALHTNFVDTDALIEQST-GQSCGAVFSKIGEPEFRKLEES 90
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
+++ +L VVS GGGAV P+ + +W+DV E AQR A +SRP+L
Sbjct: 91 KVRE-ALGTSGVVSLGGGAVLSPLTRNLLLGHTVIWIDVDPEEGAQRTGA--DNSRPILQ 147
Query: 180 QCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGH 223
+ Y E + L+ E +N R +A LG+
Sbjct: 148 AQDPIAHYRELIETRRPLYREVSRHRSNTTGRGPQRVVADILGY 191
>gi|302873243|ref|YP_003841876.1| shikimate kinase [Clostridium cellulovorans 743B]
gi|307688590|ref|ZP_07631036.1| Shikimate kinase [Clostridium cellulovorans 743B]
gi|302576100|gb|ADL50112.1| Shikimate kinase [Clostridium cellulovorans 743B]
Length = 166
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 80/146 (54%), Gaps = 14/146 (9%)
Query: 62 LVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL 121
L+GM G GK+T+GK+ + LG F D D IE D V+EIF+ GE FFR+ E+ +
Sbjct: 6 LIGMPGCGKSTIGKLAAMKLGIPFVDVDEYIENKYDA-KVSEIFEKKGEKFFRDLESTCI 64
Query: 122 QKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
++LS LV+STGGG+V R N ++ G+ +++D E + I+ V SRPLL Q
Sbjct: 65 KELSEKTDLVISTGGGSVLREENMINLKANGVIMFIDRSPEDI---ISDVDIASRPLLAQ 121
Query: 181 CESGDAYTEALNRLSTLWEERGEAYA 206
R+ TL+ ER Y
Sbjct: 122 ---------GSERIYTLYNERINLYT 138
>gi|407800427|ref|ZP_11147289.1| AroK [Oceaniovalibus guishaninsula JLT2003]
gi|407057656|gb|EKE43630.1| AroK [Oceaniovalibus guishaninsula JLT2003]
Length = 170
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 65 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 124
MMG+GKT VG+ ++ LG +F D D IE++ + SVAEIF GE FFR KE++VL +L
Sbjct: 1 MMGAGKTAVGQAVARRLGVAFLDSDAEIERAAN-RSVAEIFARDGEPFFRRKESQVLARL 59
Query: 125 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
R ++S GGGA N + + G+SVWL L+ L R+ D+RPLL
Sbjct: 60 LAGRPGILSVGGGAFLSADNRAAIGRDGVSVWLRADLDLLWTRVRR--KDTRPLLR 113
>gi|359409114|ref|ZP_09201582.1| shikimate kinase [SAR116 cluster alpha proteobacterium HIMB100]
gi|356675867|gb|EHI48220.1| shikimate kinase [SAR116 cluster alpha proteobacterium HIMB100]
Length = 213
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 81/158 (51%), Gaps = 11/158 (6%)
Query: 56 SGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFRE 115
+ + I LVG+MGSGKT +GK L+ L F D D LIE SV +IF+L GE FRE
Sbjct: 24 TNKTIVLVGLMGSGKTALGKRLAVALDRPFIDSDQLIEHEA-SLSVRDIFELSGEPKFRE 82
Query: 116 KETEVLQKLSLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E + K +++STGGGA P ++ IS+W+D + L +RI T S
Sbjct: 83 IERNTILKHVTGAPVILSTGGGAFCDPRTRAEIIEHAISIWIDSTPKNLLRRIG--NTAS 140
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
RPLL +GD L L+ L E R Y A V
Sbjct: 141 RPLL---TTGD----PLEILTRLRETRLADYKQAELHV 171
>gi|432383285|ref|ZP_19626210.1| shikimate kinase 1 [Escherichia coli KTE15]
gi|430903670|gb|ELC25406.1| shikimate kinase 1 [Escherichia coli KTE15]
Length = 173
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 7/146 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F+D D IE+ G V +F L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRT-GADVGWVFDLEGEEGFRDRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SR 175
+V+ +L+ + +V++TGGG+V +R R +G+ V+L+ +E +++A D R
Sbjct: 64 EKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKR 120
Query: 176 PLLHQCESGDAYTEAL-NRLSTLWEE 200
PLLH EAL N + L+EE
Sbjct: 121 PLLHVEIPPREVLEALANERNPLYEE 146
>gi|451343308|ref|ZP_21912381.1| hypothetical protein HMPREF9943_00606 [Eggerthia catenaformis OT
569 = DSM 20559]
gi|449337888|gb|EMD17043.1| hypothetical protein HMPREF9943_00606 [Eggerthia catenaformis OT
569 = DSM 20559]
Length = 173
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 72/120 (60%), Gaps = 6/120 (5%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GMMG GK+T+G++L+ + Y + D DT +E T + E+F + E +FR+KETE
Sbjct: 4 IILIGMMGCGKSTIGRMLAERISYQYIDMDTYLENKYHST-IPELFSV-SELYFRDKETE 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+ + ++STGGG + R N Y++ G+ ++D P+E + I + TD RPLL
Sbjct: 62 CCKDMGHTDNKIISTGGGVILREENMLYLKNNGLVFFIDRPVEMI---INELNTDHRPLL 118
>gi|206558685|ref|YP_002229445.1| shikimate kinase [Burkholderia cenocepacia J2315]
gi|198034722|emb|CAR50589.1| shikimate kinase I [Burkholderia cenocepacia J2315]
Length = 184
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++ VG+MG+GKTTVG+ ++ L +FFD D IE G + IF+L GE FR++ET+
Sbjct: 10 VFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEIEART-GARIPVIFELEGEAGFRDRETQ 68
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ L+ +V++TGGGAV RP N ++ GI V+L L R +RPLL
Sbjct: 69 VIADLTQRENIVLATGGGAVLRPENRDSLKTNGIVVYLRANPHDLWLRTRK--DKNRPLL 126
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ RL L+E R Y
Sbjct: 127 RT-------DDPKGRLEALYEVRDPLY 146
>gi|392310526|ref|ZP_10273060.1| shikimate kinase I [Pseudoalteromonas citrea NCIMB 1889]
Length = 172
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 87/149 (58%), Gaps = 10/149 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F D D IE+ G +A +F L GE FR +E
Sbjct: 5 RNIFLVGPMGAGKSTIGRHLADQLHLEFVDSDQEIERRT-GADIAWVFDLEGEDGFRVRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRP 176
V+ L+ M+ +V++TGGG+ V++ + + +GI V+L+ P+E +++A D R
Sbjct: 64 EGVISDLTEMQGIVLATGGGSVVSKEVRNKLSARGIVVYLETPIE---KQVARTQRDKRR 120
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAY 205
L Q E +A + L RL+ EER Y
Sbjct: 121 PLLQTE--EAPRDVLERLA---EEREPLY 144
>gi|154493503|ref|ZP_02032823.1| hypothetical protein PARMER_02842 [Parabacteroides merdae ATCC
43184]
gi|423346743|ref|ZP_17324431.1| shikimate kinase [Parabacteroides merdae CL03T12C32]
gi|423723284|ref|ZP_17697437.1| shikimate kinase [Parabacteroides merdae CL09T00C40]
gi|154086713|gb|EDN85758.1| shikimate kinase [Parabacteroides merdae ATCC 43184]
gi|409219894|gb|EKN12854.1| shikimate kinase [Parabacteroides merdae CL03T12C32]
gi|409241709|gb|EKN34477.1| shikimate kinase [Parabacteroides merdae CL09T00C40]
Length = 173
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 78/127 (61%), Gaps = 4/127 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L+G MG+GKTTVGK+LS LG SF D D IE T V ++F GE FR+ E
Sbjct: 4 IFLIGYMGAGKTTVGKVLSRQLGLSFIDLDHYIEGRYHKT-VGQLFAEKGEDAFRDIERR 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L++++ ++VSTGGGA N +M G +V+L V +E LA+R+ + +RP+L
Sbjct: 63 MLREVAAFEDVLVSTGGGAPCFFDNMEFMNGAGQTVYLKVSVEELAKRLELCKS-TRPIL 121
Query: 179 HQCESGD 185
+ SGD
Sbjct: 122 -KGRSGD 127
>gi|386740473|ref|YP_006213653.1| shikimate kinase [Corynebacterium pseudotuberculosis 31]
gi|384477167|gb|AFH90963.1| Shikimate kinase [Corynebacterium pseudotuberculosis 31]
Length = 193
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ LVG G+GKTTVGK L+ L +F D D LIEQS G S +F GE FR+ E
Sbjct: 27 VVLVGPPGAGKTTVGKRLANALHTNFVDTDALIEQST-GQSCGAVFSKIGEPEFRKLEES 85
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
+++ +L VVS GGGAV P+ + +W+DV E AQR A +SRP+L
Sbjct: 86 KVRE-ALGTSGVVSLGGGAVLSPLTRNLLLGHTVIWIDVDPEEGAQRTGA--DNSRPILQ 142
Query: 180 QCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGH 223
+ Y E + L+ E +N R +A LG+
Sbjct: 143 AQDPIAHYRELIETRRPLYREVSRHRSNTTGRGPQRVVADILGY 186
>gi|444356106|ref|ZP_21157812.1| shikimate kinase [Burkholderia cenocepacia BC7]
gi|444366872|ref|ZP_21166879.1| shikimate kinase [Burkholderia cenocepacia K56-2Valvano]
gi|443603852|gb|ELT71831.1| shikimate kinase [Burkholderia cenocepacia K56-2Valvano]
gi|443607610|gb|ELT75294.1| shikimate kinase [Burkholderia cenocepacia BC7]
Length = 190
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++ VG+MG+GKTTVG+ ++ L +FFD D IE G + IF+L GE FR++ET+
Sbjct: 16 VFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEIEART-GARIPVIFELEGEAGFRDRETQ 74
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ L+ +V++TGGGAV RP N ++ GI V+L L R +RPLL
Sbjct: 75 VIADLTQRENIVLATGGGAVLRPENRDSLKTNGIVVYLRANPHDLWLRTRK--DKNRPLL 132
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ RL L+E R Y
Sbjct: 133 RTDDPK-------GRLEALYEVRDPLY 152
>gi|354593544|ref|ZP_09011587.1| 3-dehydroquinate synthase [Commensalibacter intestini A911]
gi|353672655|gb|EHD14351.1| 3-dehydroquinate synthase [Commensalibacter intestini A911]
Length = 549
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 17/184 (9%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+G+MG+GKTT+G+ L+ L F D D +E++ G ++A+IF+ YGE FR E E
Sbjct: 12 ITLIGLMGAGKTTIGRKLAHSLSIPFVDSDHEVEKTA-GCTIADIFEQYGEAEFRRVEHE 70
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+++L +V++TGGGA + ++ ++WL +E L +RI+ RPLL
Sbjct: 71 VIRRLIKQAPIVLATGGGAFMHAKTRALLKERTTTIWLHCSVETLLERISH--HTHRPLL 128
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 238
+ SGD LS L R YA A+ + + V+ ++L+ +++E
Sbjct: 129 N---SGDKR----EILSNLMMTRYPIYAEADLIIPCYDNKVE------TTLSQTLLSLEH 175
Query: 239 LEQI 242
EQ+
Sbjct: 176 AEQM 179
>gi|441505724|ref|ZP_20987704.1| Shikimate kinase I [Photobacterium sp. AK15]
gi|441426454|gb|ELR63936.1| Shikimate kinase I [Photobacterium sp. AK15]
Length = 173
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 85/150 (56%), Gaps = 12/150 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L FFD DT+IE+ G ++ +F + GE FR +E
Sbjct: 5 RNIFLVGPMGAGKSTIGRHLAQQLHMEFFDSDTVIEERT-GADISWVFDVEGEDGFRVRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAAVGTD-SR 175
+V+ L+ + +V++TGGG+V N R +GI V+L+ +E +++A D R
Sbjct: 64 EKVINDLTQEQGIVLATGGGSVKSKENRNRLSARGIVVYLETTIE---KQLARTQRDKKR 120
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAY 205
PLL E E + L L EER Y
Sbjct: 121 PLLQTPE------EPRDVLEALAEERNPLY 144
>gi|433444492|ref|ZP_20409364.1| shikimate kinase family protein [Anoxybacillus flavithermus
TNO-09.006]
gi|432001520|gb|ELK22395.1| shikimate kinase family protein [Anoxybacillus flavithermus
TNO-09.006]
Length = 168
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 86/160 (53%), Gaps = 13/160 (8%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ IYL G MG+GKTTVG+ L VL D D IEQ V G ++ +IF GE FR E
Sbjct: 2 KAIYLTGFMGAGKTTVGRRLGEVLQLPVIDTDAYIEQQV-GKTITKIFAEEGEETFRAYE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+ L+KL ++++TGGG V + N ++M++ GI ++L L L +R+A ++RP
Sbjct: 61 RDALKKLP-KEHVIITTGGGIVIQEENRQFMREHGIVIYLHCELNELFRRLA--DDETRP 117
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
LL + ++ L+E+R Y A+ + N
Sbjct: 118 LLMGNKQ--------KQMKQLFEQRLPFYQEAHMTIDTTN 149
>gi|92112746|ref|YP_572674.1| shikimate kinase [Chromohalobacter salexigens DSM 3043]
gi|123387601|sp|Q1QZY3.1|AROK_CHRSD RecName: Full=Shikimate kinase; Short=SK
gi|91795836|gb|ABE57975.1| shikimate kinase [Chromohalobacter salexigens DSM 3043]
Length = 180
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 77/123 (62%), Gaps = 4/123 (3%)
Query: 59 CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKET 118
I LVG MG+GK+T+G++L+ L FFD D IE G ++A IF + GE FR++ET
Sbjct: 6 TIILVGPMGAGKSTIGRLLAAELQREFFDSDHEIEARC-GANIAWIFDVEGEAGFRDRET 64
Query: 119 EVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPL 177
+L++L+ + +V++TGGGAV R N + + ++G V+L +E +R A +RPL
Sbjct: 65 AMLRELASLDAVVLATGGGAVMREDNRQALRERGTVVYLATSVEQQIRRTAR--DRNRPL 122
Query: 178 LHQ 180
L Q
Sbjct: 123 LRQ 125
>gi|407981030|ref|ZP_11161790.1| shikimate kinase [Bacillus sp. HYC-10]
gi|407412152|gb|EKF33994.1| shikimate kinase [Bacillus sp. HYC-10]
Length = 185
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 89/162 (54%), Gaps = 12/162 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I L+G MG GKTT+G++++ L F D D IE+ + T + E+F+ GE FFR+ E
Sbjct: 12 RNIVLIGFMGVGKTTIGQMVAKKLYRDFIDVDQEIEKKYNMT-IPEMFQQKGEAFFRQAE 70
Query: 118 TEVLQKLSLMRQL-VVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTDSR 175
+ + L QL +VS GGGA + R K +V +LD+ E QR+ + ++R
Sbjct: 71 KDYIVDLCEHTQLKIVSLGGGAFKQEEIKRACLKHCTVLFLDLSWENWKQRLDIL-IENR 129
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
P+LH ++ + L+EER E YA N+RV +++
Sbjct: 130 PVLH--------NRTIDEMKELFEERREIYALHNSRVETDHL 163
>gi|334142337|ref|YP_004535545.1| shikimate kinase [Novosphingobium sp. PP1Y]
gi|333940369|emb|CCA93727.1| shikimate kinase [Novosphingobium sp. PP1Y]
Length = 205
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 19/161 (11%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I LVGMMG GK++VGK L+ +L F D D IE+S + EIF+ YGE +FR+ E
Sbjct: 36 RPIVLVGMMGVGKSSVGKRLASLLNCPFVDADEEIERSAQ-MGIPEIFETYGEDYFRDGE 94
Query: 118 TEVLQKLSLMRQ--LVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVG 171
V+ +L + V++TGGGA TR + + + +++WLD ++ L +R
Sbjct: 95 RRVIARLIDESEGCRVIATGGGAFCNAETRAL---ILHRALTIWLDSEVDTLVERTGR-- 149
Query: 172 TDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 212
D+RPLL E + L+ L EER Y+ A V
Sbjct: 150 KDNRPLLKDGEPREI-------LARLREERRPHYSQAPIHV 183
>gi|389571567|ref|ZP_10161657.1| shikimate kinase [Bacillus sp. M 2-6]
gi|388428680|gb|EIL86475.1| shikimate kinase [Bacillus sp. M 2-6]
Length = 185
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 89/162 (54%), Gaps = 12/162 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I L+G MG GKTT+G++++ L F D D IE+ + T + E+F+ GE FFR+ E
Sbjct: 12 RNIVLIGFMGVGKTTIGQLVAKKLYRDFIDVDQEIEKKYNMT-IPEMFQQKGEAFFRQAE 70
Query: 118 TEVLQKLSLMRQL-VVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTDSR 175
+ + L QL +VS GGGA + R K +V +LD+ E QR+ + ++R
Sbjct: 71 KDYIVDLCEHTQLKIVSLGGGAFKQEEIKRSCLKHCTVLFLDLSWENWKQRLDIL-IENR 129
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
P+LH L+ + L+EER E Y+ N+RV +++
Sbjct: 130 PVLH--------NRTLDEMKELFEERREIYSLHNSRVETDHL 163
>gi|297521029|ref|ZP_06939415.1| shikimate kinase I [Escherichia coli OP50]
Length = 198
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 7/160 (4%)
Query: 44 LKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
L N E R I+LVG MG+GK+T+G+ L+ L F+D D IE+ G V
Sbjct: 43 LTNSLSSTEKMAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRT-GADVGW 101
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEA 162
+F L GE FR++E +V+ +L+ + +V++TGGG+V +R R +G+ V+L+ +E
Sbjct: 102 VFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE- 160
Query: 163 LAQRIAAVGTD-SRPLLHQCESGDAYTEAL-NRLSTLWEE 200
+++A D RPLLH EAL N + L+EE
Sbjct: 161 --KQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEE 198
>gi|421760198|ref|ZP_16197017.1| shikimate kinase [Bartonella bacilliformis INS]
gi|411175915|gb|EKS45936.1| shikimate kinase [Bartonella bacilliformis INS]
Length = 208
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 32 GNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTL 91
N PI E + E+ + + + VG MGSGK+ +GK ++ +L F+D D
Sbjct: 3 NNRPHPILETHI----KSELLSCFNQQSLVFVGFMGSGKSAIGKRVATMLDLPFYDSDQE 58
Query: 92 IEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQK 150
IE++ T ++++F++YGE FR E V+ + LV++TGGGA + I K
Sbjct: 59 IEKAAQMT-ISDLFEIYGESEFRLLEQRVILNILKNGPLVLATGGGAYINENIRKAIHHK 117
Query: 151 GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANA 210
GIS+WL L +R++ T RPLL + + TL E+R YA AN
Sbjct: 118 GISIWLKTDFNLLIKRVSQRLT--RPLLQTDNPQET-------VRTLMEQRYPIYATANL 168
Query: 211 RVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEED 250
V HK+ ++ +A + +++++ ++ + +
Sbjct: 169 MVK--------NHKESRNM----VAKKVIKRVQNYINDRN 196
>gi|383188245|ref|YP_005198373.1| shikimate kinase [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|384256166|ref|YP_005400100.1| shikimate kinase I [Rahnella aquatilis HX2]
gi|371586503|gb|AEX50233.1| shikimate kinase [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|380752142|gb|AFE56533.1| shikimate kinase I [Rahnella aquatilis HX2]
Length = 173
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L FFD D IE+ G V +F L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMEFFDSDHEIERRT-GADVGWVFDLEGEDGFRDRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SR 175
+V+ +L+ + +V++TGGG+V +R R +G+ V+L+ +E +++A D R
Sbjct: 64 EKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKR 120
Query: 176 PLLHQCESGDAYTEALNR-LSTLWEE 200
PLL EAL R + L+EE
Sbjct: 121 PLLQVSAPPREVLEALARERNPLYEE 146
>gi|312622092|ref|YP_004023705.1| shikimate kinase [Caldicellulosiruptor kronotskyensis 2002]
gi|312202559|gb|ADQ45886.1| Shikimate kinase [Caldicellulosiruptor kronotskyensis 2002]
Length = 172
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 98/173 (56%), Gaps = 11/173 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I L G MG GKTT+GK+++ L D D+ + + G ++ +IF+++GE FRE E
Sbjct: 2 KNIVLTGFMGCGKTTIGKLIAEKLDIELIDTDSEVIKEF-GMTIDKIFEVHGEKKFREVE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
T V++++S + +V+STGGG V P N + +++ G+ +L E++ +R+ D+RP
Sbjct: 61 TRVIERVSKLENVVISTGGGVVLNPENVKLLRENGVIYFLYASAESILKRLK--DDDTRP 118
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 229
LL ++GD L+ + L R Y N + ++ + + +L + + S+
Sbjct: 119 LL---KNGD----KLSNIIRLLNMRMPFYKNCDFEINTDILTPELAAEKIISI 164
>gi|429092509|ref|ZP_19155137.1| Shikimate kinase III [Cronobacter dublinensis 1210]
gi|426742708|emb|CCJ81250.1| Shikimate kinase III [Cronobacter dublinensis 1210]
Length = 174
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 6/122 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDT-LIEQSVDGTSVAEIFKLYGEGFFREKET 118
IYL+G G GKTT G+ L+ LGY F D D L EQ+ +VAE+ + G FR++E+
Sbjct: 5 IYLIGARGCGKTTTGEALARALGYGFADTDRWLFEQT--QMTVAEVVEKEGWPGFRDRES 62
Query: 119 EVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD-SRP 176
E LQ ++L VV+TGGG V R N +M Q G+ ++L+VP+ LAQR+ A + RP
Sbjct: 63 EALQAVTLP-ATVVATGGGMVLRDGNREFMRQHGVVIYLNVPVAVLAQRLEAFPEEGQRP 121
Query: 177 LL 178
L
Sbjct: 122 TL 123
>gi|152977949|ref|YP_001343578.1| shikimate kinase [Actinobacillus succinogenes 130Z]
gi|171472930|sp|A6VKZ6.1|AROK_ACTSZ RecName: Full=Shikimate kinase; Short=SK
gi|150839672|gb|ABR73643.1| Shikimate kinase [Actinobacillus succinogenes 130Z]
Length = 175
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 82/145 (56%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ LG FFD D++IE+ G ++ IF + GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLGMEFFDSDSVIEERA-GAEISWIFDIEGENGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ + +V+STGGG V N ++ +GI V+L + +R RP
Sbjct: 64 ERIINELTQKQGIVLSTGGGVVLSKENRNHLSARGIVVYLQTTVAKQFERTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL E E L + + L+EE
Sbjct: 122 LLQGVEDARQVLENLAVIRNPLYEE 146
>gi|424778842|ref|ZP_18205781.1| shikimate kinase [Alcaligenes sp. HPC1271]
gi|422886366|gb|EKU28789.1| shikimate kinase [Alcaligenes sp. HPC1271]
Length = 201
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 91/165 (55%), Gaps = 10/165 (6%)
Query: 37 PIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSV 96
P+ +A++L Q+ P R I LVGMMG+GKTT+G+ L+ L F D D +E +
Sbjct: 17 PLTDAELLH--LQQTGP----RPIILVGMMGAGKTTIGRQLARELKREFMDLDHELE-AR 69
Query: 97 DGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVW 155
G VA IF+ GE FR++E+ VL S +V++TGGGA+ N + ++ +GI V+
Sbjct: 70 SGVRVATIFEFEGEQGFRKRESAVLDICSRQTGIVLATGGGAILSEANRQIIKDRGIVVY 129
Query: 156 LDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEE 200
L ++ L +R+A +RPLL + E L L+EE
Sbjct: 130 LCATVDELYRRVAR--DRNRPLLQTADPRARIQELLQAREPLYEE 172
>gi|429123617|ref|ZP_19184150.1| shikimate kinase [Brachyspira hampsonii 30446]
gi|426280450|gb|EKV57464.1| shikimate kinase [Brachyspira hampsonii 30446]
Length = 177
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 85/151 (56%), Gaps = 14/151 (9%)
Query: 56 SGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFRE 115
+ + I+++G+ G GK+ + K+L+ L Y+ +D D+ IE +G ++ +IF GE +FR
Sbjct: 8 NNKIIFIIGLPGCGKSALSKMLAEKLNYNLYDMDSFIENK-EGRTITDIFANNGEDYFRN 66
Query: 116 KETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDS 174
E+EVL +LSL+ V+STGGG V N M+ KG+++++D + + + I
Sbjct: 67 IESEVLHELSLLSNAVISTGGGIVLSEKNRNIMRDKGLTIFVDRNPDIILENIDPA---Q 123
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
RPLL + + N+L L ++R Y
Sbjct: 124 RPLLAKDK---------NKLLELSKQRDSLY 145
>gi|333982156|ref|YP_004511366.1| shikimate kinase [Methylomonas methanica MC09]
gi|333806197|gb|AEF98866.1| Shikimate kinase [Methylomonas methanica MC09]
Length = 192
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 24/196 (12%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IYL+G+MG GKTT+GK L+ L F+D D +IE S+ G + IF GE FR +E
Sbjct: 18 IYLIGLMGVGKTTIGKQLAKALQRPFYDSDKVIEDSM-GVDIPTIFSYEGEAGFRLREQA 76
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+Q+L+ + +V++TGGG+V +P N ++ G V+L ++ + R RPLL
Sbjct: 77 VIQQLTAIPGIVMATGGGSVIKPENREALKASGFVVYLHCSIDKILYRTRH--DTQRPLL 134
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY-ANANARVSLENIAVKLGHKDVSSLTPVTIAIE 237
RL +L +R Y A A+ ++ D SL T+
Sbjct: 135 RT-------DNPRQRLQSLLADREPLYMACADFKI------------DSGSLPGKTVVKT 175
Query: 238 ALEQIEGFLKEEDDMA 253
L+Q + L+ + +A
Sbjct: 176 ILQQYQAALEHNESIA 191
>gi|288942751|ref|YP_003444991.1| Shikimate kinase [Allochromatium vinosum DSM 180]
gi|288898123|gb|ADC63959.1| Shikimate kinase [Allochromatium vinosum DSM 180]
Length = 174
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 87/153 (56%), Gaps = 13/153 (8%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L + I++VG MG+GK+TVG+ L+ L Y+F D D I++ G + IF+ GE FR
Sbjct: 2 LRAQNIFIVGPMGAGKSTVGRQLAEALSYTFKDSDHEIQRRT-GVDIPTIFEFEGESGFR 60
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTD 173
+E +V+++L ++V++TGGGAV P N + + +G+ ++L E Q+ A D
Sbjct: 61 ARERQVIEELVAEERIVLATGGGAVLNPENRQDLSARGVVIYLHCSPE---QQYARTARD 117
Query: 174 -SRPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
+RPLL E+ D LNRL + ER Y
Sbjct: 118 RNRPLL---ETED----PLNRLREIMAEREPLY 143
>gi|406595334|ref|YP_006746464.1| shikimate kinase I [Alteromonas macleodii ATCC 27126]
gi|407682263|ref|YP_006797437.1| shikimate kinase I [Alteromonas macleodii str. 'English Channel
673']
gi|407686182|ref|YP_006801355.1| shikimate kinase I [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|407698662|ref|YP_006823449.1| shikimate kinase I [Alteromonas macleodii str. 'Black Sea 11']
gi|406372655|gb|AFS35910.1| shikimate kinase I [Alteromonas macleodii ATCC 27126]
gi|407243874|gb|AFT73060.1| shikimate kinase I [Alteromonas macleodii str. 'English Channel
673']
gi|407247809|gb|AFT76994.1| shikimate kinase I [Alteromonas macleodii str. 'Black Sea 11']
gi|407289562|gb|AFT93874.1| shikimate kinase I [Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 171
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L FFD D IE+ G +A IF L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRHLADELHLDFFDSDQEIERRT-GADIAWIFDLEGEDGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS-R 175
V+ L+ + +V++TGGG+ VT+ + R +GI V+L ++ +++A D R
Sbjct: 64 ENVINDLTDKQGIVLATGGGSIVTKAVRNRLSARGIVVYLQTTID---KQVARTQRDKRR 120
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANAN---ARVSLENIAVKLG 222
PLL + + + L+EE + + + AR I K+G
Sbjct: 121 PLLQNEDPEQVLRDLAEMRNPLYEEVADYIVDTDDQSARAVANQIISKIG 170
>gi|157691086|ref|YP_001485548.1| shikimate kinase [Bacillus pumilus SAFR-032]
gi|194016038|ref|ZP_03054653.1| shikimate kinase [Bacillus pumilus ATCC 7061]
gi|238686823|sp|A8F9S1.1|AROK_BACP2 RecName: Full=Shikimate kinase; Short=SK
gi|157679844|gb|ABV60988.1| shikimate kinase [Bacillus pumilus SAFR-032]
gi|194012393|gb|EDW21960.1| shikimate kinase [Bacillus pumilus ATCC 7061]
Length = 185
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 89/162 (54%), Gaps = 12/162 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I L+G MG GKTT+G++++ L F D D IE+ + T + E+F+ GE FFR+ E
Sbjct: 12 RNIVLIGFMGVGKTTIGQLVAKKLYRDFIDVDQEIEKKYNMT-IPEMFQQKGEAFFRQAE 70
Query: 118 TEVLQKLSLMRQL-VVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTDSR 175
+ + L QL +VS GGGA + R K +V +LD+ E QR+ + ++R
Sbjct: 71 KDYIVDLCEHTQLKIVSLGGGAFKQEEIKRACLKHCTVLFLDLSWENWKQRLDIL-IENR 129
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
P+LH L+ + L+EER E Y+ N+RV +++
Sbjct: 130 PVLH--------NRTLDEMKELFEERREIYSLHNSRVETDHL 163
>gi|296125838|ref|YP_003633090.1| shikimate kinase [Brachyspira murdochii DSM 12563]
gi|296017654|gb|ADG70891.1| Shikimate kinase [Brachyspira murdochii DSM 12563]
Length = 180
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 14/152 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
+ + I+++G+ G GK+ + K+L+ L Y+ +D D+ IEQ + T + +IF GE +FR
Sbjct: 7 IDNKVIFVIGLPGCGKSALSKLLAEKLNYTLYDMDSFIEQKEEKT-ITDIFADNGEEYFR 65
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD 173
+ E+EVL++L+ M V+STGGG V N M +KG+++++D E + Q I
Sbjct: 66 KVESEVLEELAGMNNAVISTGGGIVLLEKNRNIMKEKGLTIFIDRNPEIILQNIDP---R 122
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
RPLL + + N+L L ++R Y
Sbjct: 123 ERPLLAKDK---------NKLLELSKQRDNLY 145
>gi|384213927|ref|YP_005605090.1| shikimate kinase [Bradyrhizobium japonicum USDA 6]
gi|354952823|dbj|BAL05502.1| shikimate kinase [Bradyrhizobium japonicum USDA 6]
Length = 208
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I LVGMMG GK+T+G+ ++ L F D DT IE + G ++ EIF+ +GE +FR
Sbjct: 20 LGTRSIVLVGMMGVGKSTIGRRMAARLKLPFVDADTEIEIAHAGMTIPEIFERHGEPYFR 79
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWL 156
+ E V+ +L +V++TGGGA R R K +S+WL
Sbjct: 80 DGEARVIARLLDGEPIVLATGGGAFMREETRNRIAAKAVSIWL 122
>gi|333384257|ref|ZP_08475897.1| shikimate kinase [Dysgonomonas gadei ATCC BAA-286]
gi|332826750|gb|EGJ99567.1| shikimate kinase [Dysgonomonas gadei ATCC BAA-286]
Length = 173
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L+G MG+GKTT GK L+ VL F D D I+ T V+++F+ GEG FR+ E+
Sbjct: 4 IFLIGYMGAGKTTAGKELAKVLELEFIDLDHFIQARYQKT-VSQLFQDVGEGEFRKIESS 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL+++ +V+STGGG N YM K G +V+L+ EALA R+ + RPL+
Sbjct: 63 VLKEVGEFENVVISTGGGTPCFFDNMEYMNKAGTTVYLNAAPEALAARLNTC-KEKRPLI 121
>gi|253997511|ref|YP_003049575.1| shikimate kinase [Methylotenera mobilis JLW8]
gi|253984190|gb|ACT49048.1| Shikimate kinase [Methylotenera mobilis JLW8]
Length = 168
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
IY +G+MG+GKTT+G++LS L F+D D IE+ G + IF+L GEG FR++ET
Sbjct: 4 IYFIGLMGAGKTTIGRMLSKQLDKEFYDSDVEIERRT-GVKIPLIFELEGEGGFRKRETL 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
L++L + ++++TGGGAV P N ++ G ++L + L QR T RPLL
Sbjct: 63 ALEELCQLDNMIMATGGGAVLMPENRVLLKNSGKIIYLRGKVNDLYQRTRHDKT--RPLL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYAN 207
G + L R L+ ER Y +
Sbjct: 121 Q----GGNMKQKLER---LYLERDPIYTS 142
>gi|325983382|ref|YP_004295784.1| shikimate kinase [Nitrosomonas sp. AL212]
gi|325532901|gb|ADZ27622.1| Shikimate kinase [Nitrosomonas sp. AL212]
Length = 559
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 86/156 (55%), Gaps = 10/156 (6%)
Query: 51 IEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGE 110
I+ L I LVGMMG+GKTT+GK LS L +F D D I++ G + IF++ GE
Sbjct: 5 IQKKLGDTNIILVGMMGAGKTTIGKALSNSLCKAFVDSDHEIQRRT-GVKIPVIFEIEGE 63
Query: 111 GFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAA 169
FR++E+EVL + + ++++TGGGAV N + + Q GI ++L + L +R
Sbjct: 64 AGFRKRESEVLAGMVEKKNIILATGGGAVLNAENRQLLRQGGIVIYLRASVNDLYRRTRH 123
Query: 170 VGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
+RPLL E+ A RL+ L+ +R Y
Sbjct: 124 --DKNRPLLQATENLYA------RLNELYMQRDALY 151
>gi|385336300|ref|YP_005890247.1| shikimate kinase [Neisseria gonorrhoeae TCDC-NG08107]
gi|317164843|gb|ADV08384.1| shikimate kinase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 157
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 19/165 (11%)
Query: 66 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 125
MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR +ET +L+KL
Sbjct: 1 MGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFRSRETAILKKLI 59
Query: 126 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 184
++ +V+STGGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 60 VLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLLQ----- 112
Query: 185 DAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 221
+ L +L L+ R Y +AN R +++ + +L
Sbjct: 113 --VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 155
>gi|71083159|ref|YP_265878.1| shikimate kinase [Candidatus Pelagibacter ubique HTCC1062]
gi|71062272|gb|AAZ21275.1| shikimate kinase [Candidatus Pelagibacter ubique HTCC1062]
Length = 170
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 12/159 (7%)
Query: 56 SGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFRE 115
S + + +GMMGSGK+++G ++S L F D D LIE+ G +++EIFK+ GE +FR
Sbjct: 3 SNKNLVFLGMMGSGKSSIGAMVSKQLNIPFIDIDNLIEEHA-GMTISEIFKVNGEAYFRN 61
Query: 116 KETEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E ++ K +++VVS GGG+ + I ++ S WLD L +RI G+
Sbjct: 62 LEEKITIKSLKHKKVVVSLGGGSFINDKIRKDILKNHFSFWLDWDDLVLIKRIK--GSKK 119
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 213
RPL S D +A + +R + Y+ AN +++
Sbjct: 120 RPL--ASNSTDLEIKA------IINKRKKVYSKANFKIN 150
>gi|53711526|ref|YP_097518.1| shikimate kinase [Bacteroides fragilis YCH46]
gi|60679787|ref|YP_209931.1| shikimate kinase [Bacteroides fragilis NCTC 9343]
gi|265764920|ref|ZP_06093195.1| shikimate kinase [Bacteroides sp. 2_1_16]
gi|336407721|ref|ZP_08588217.1| shikimate kinase [Bacteroides sp. 2_1_56FAA]
gi|375356572|ref|YP_005109343.1| putative shikimate kinase [Bacteroides fragilis 638R]
gi|383116536|ref|ZP_09937284.1| shikimate kinase [Bacteroides sp. 3_2_5]
gi|423248195|ref|ZP_17229211.1| shikimate kinase [Bacteroides fragilis CL03T00C08]
gi|423253144|ref|ZP_17234075.1| shikimate kinase [Bacteroides fragilis CL03T12C07]
gi|423259414|ref|ZP_17240337.1| shikimate kinase [Bacteroides fragilis CL07T00C01]
gi|423263612|ref|ZP_17242615.1| shikimate kinase [Bacteroides fragilis CL07T12C05]
gi|423269906|ref|ZP_17248878.1| shikimate kinase [Bacteroides fragilis CL05T00C42]
gi|423272639|ref|ZP_17251586.1| shikimate kinase [Bacteroides fragilis CL05T12C13]
gi|423282498|ref|ZP_17261383.1| shikimate kinase [Bacteroides fragilis HMW 615]
gi|81317140|sp|Q5LIQ7.1|AROK_BACFN RecName: Full=Shikimate kinase; Short=SK
gi|81383889|sp|Q64ZU2.1|AROK_BACFR RecName: Full=Shikimate kinase; Short=SK
gi|52214391|dbj|BAD46984.1| shikimate kinase [Bacteroides fragilis YCH46]
gi|60491221|emb|CAH05969.1| putative shikimate kinase [Bacteroides fragilis NCTC 9343]
gi|251948190|gb|EES88472.1| shikimate kinase [Bacteroides sp. 3_2_5]
gi|263254304|gb|EEZ25738.1| shikimate kinase [Bacteroides sp. 2_1_16]
gi|301161252|emb|CBW20790.1| putative shikimate kinase [Bacteroides fragilis 638R]
gi|335944800|gb|EGN06617.1| shikimate kinase [Bacteroides sp. 2_1_56FAA]
gi|387776994|gb|EIK39094.1| shikimate kinase [Bacteroides fragilis CL07T00C01]
gi|392657044|gb|EIY50681.1| shikimate kinase [Bacteroides fragilis CL03T12C07]
gi|392660302|gb|EIY53916.1| shikimate kinase [Bacteroides fragilis CL03T00C08]
gi|392700752|gb|EIY93914.1| shikimate kinase [Bacteroides fragilis CL05T00C42]
gi|392707034|gb|EIZ00154.1| shikimate kinase [Bacteroides fragilis CL07T12C05]
gi|392708716|gb|EIZ01821.1| shikimate kinase [Bacteroides fragilis CL05T12C13]
gi|404582066|gb|EKA86761.1| shikimate kinase [Bacteroides fragilis HMW 615]
Length = 179
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L G MG+GKTT+GK L+ L F D D IE+ T V E+F GE FRE E
Sbjct: 4 IFLTGYMGAGKTTLGKALARELHIPFIDLDWYIEERFHKT-VGELFSERGEASFRELEKN 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L ++ +V+STGGGA N YM + G +V+LDV + L R+ V RP+L
Sbjct: 63 MLHEVGEFEDVVISTGGGAPCFFDNMEYMNRVGTTVFLDVDPKVLFSRL-RVAKQQRPIL 121
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANAN 209
G E L+ + E+R Y AN
Sbjct: 122 Q----GKKDDELLDFIVQALEKRAPFYRQAN 148
>gi|323498121|ref|ZP_08103125.1| shikimate kinase I [Vibrio sinaloensis DSM 21326]
gi|323316832|gb|EGA69839.1| shikimate kinase I [Vibrio sinaloensis DSM 21326]
Length = 172
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 6/145 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F D DT+IE+ G +A +F + GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRHLASQLHMEFVDSDTVIEERT-GADIAWVFDVEGEEGFRDRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAAVGTD-SR 175
+V+ L+ + +V++TGGG++ N R +GI V+L+ +E +++A D R
Sbjct: 64 EKVINDLTEEQGIVLATGGGSIKSKENRNRLSARGIVVYLETTIE---KQLARTNRDKKR 120
Query: 176 PLLHQCESGDAYTEALNRLSTLWEE 200
PLL D + + L+EE
Sbjct: 121 PLLQTDNPRDVLESLADERNPLYEE 145
>gi|410417885|ref|YP_006898334.1| shikimate kinase I [Bordetella bronchiseptica MO149]
gi|408445180|emb|CCJ56828.1| shikimate kinase I [Bordetella bronchiseptica MO149]
Length = 211
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVGMMG+GKTT+G+ L+ L F D D +E G V IF++ GE FR +E
Sbjct: 43 IFLVGMMGAGKTTIGRGLARALRREFIDLDHELEARC-GVRVPVIFEIEGEAGFRRREAA 101
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
LQ+ + RQ++++TGGGAV N + + ++GI ++L +E L +R + +RPLL
Sbjct: 102 ALQECTQRRQIILATGGGAVLAAENRQALRERGIVIYLRASVEELFRRTSR--DRNRPLL 159
Query: 179 HQCESGDAYTEALNRLSTLWEE 200
+ E + L+ E
Sbjct: 160 ATADPRATLRELMVAREPLYNE 181
>gi|33599064|ref|NP_886624.1| shikimate kinase [Bordetella bronchiseptica RB50]
gi|81580333|sp|Q7WR85.1|AROK_BORBR RecName: Full=Shikimate kinase; Short=SK
gi|33575110|emb|CAE30573.1| shikimate kinase I [Bordetella bronchiseptica RB50]
Length = 211
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVGMMG+GKTT+G+ L+ L F D D +E G V IF++ GE FR +E
Sbjct: 43 IFLVGMMGAGKTTIGRGLARALRREFIDLDHELEARC-GVRVPVIFEIEGEAGFRRREAA 101
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
LQ+ + RQ++++TGGGAV N + + ++GI ++L +E L +R + +RPLL
Sbjct: 102 ALQECTQRRQIILATGGGAVLAAENRQALRERGIVIYLRASVEELFRRTSR--DRNRPLL 159
Query: 179 HQCESGDAYTEALNRLSTLWEE 200
+ E + L+ E
Sbjct: 160 ATADPRATLRELMVAREPLYNE 181
>gi|378822560|ref|ZP_09845323.1| shikimate kinase [Sutterella parvirubra YIT 11816]
gi|378598633|gb|EHY31758.1| shikimate kinase [Sutterella parvirubra YIT 11816]
Length = 625
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++LVGM G GKTTVG +L LG F D D IE+ V G + EIF+ GE FRE E E
Sbjct: 468 LWLVGMPGVGKTTVGGLLGEALGRPFVDLDAEIER-VAGMPIPEIFRTRGEAGFREIEAE 526
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPL 177
S R V++TGGG V R N R M++ G VWL L L T+ RPL
Sbjct: 527 AAMTASRGRGTVIATGGGTVLREANRRAMRESGTVVWLQRDLSRLP-------TEGRPL 578
>gi|322830998|ref|YP_004211025.1| shikimate kinase [Rahnella sp. Y9602]
gi|321166199|gb|ADW71898.1| Shikimate kinase [Rahnella sp. Y9602]
Length = 191
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L FFD D IE+ G V +F L GE FR++E
Sbjct: 23 RNIFLVGPMGAGKSTIGRQLAQQLNMEFFDSDHEIERRT-GADVGWVFDLEGEDGFRDRE 81
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SR 175
+V+ +L+ + +V++TGGG+V +R R +G+ V+L+ +E +++A D R
Sbjct: 82 EKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKR 138
Query: 176 PLLHQCESGDAYTEALNR-LSTLWEE 200
PLL EAL R + L+EE
Sbjct: 139 PLLQVSAPPREVLEALARERNPLYEE 164
>gi|357418832|ref|YP_004933700.1| 3-dehydroquinate synthase [Thermovirga lienii DSM 17291]
gi|355398175|gb|AER67603.1| 3-dehydroquinate synthase [Thermovirga lienii DSM 17291]
Length = 522
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I++ G M +GKTTVGK LS G F D D LIEQ +G +VAEIFK GE +FRE E +
Sbjct: 6 IFIGGFMAAGKTTVGKALSVRTGMPFVDLDVLIEQR-EGMAVAEIFKKRGEAYFRELEKK 64
Query: 120 VLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDV-PLEALAQRIAAVGTDSRPL 177
L L ++VS GGG + + + + +++G V L V P EA+A+ G RPL
Sbjct: 65 TLLDLLDAGNIIVSLGGGTLLNQDLKSKILEEGTLVILGVSPQEAIARAKNEPG--KRPL 122
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 219
L + ++ LW ER + Y N + + V
Sbjct: 123 LDE-----------GKVEVLWRERQKIYEGGNLHIETDGKTV 153
>gi|397654122|ref|YP_006494805.1| shikimate kinase [Corynebacterium ulcerans 0102]
gi|393403078|dbj|BAM27570.1| shikimate kinase [Corynebacterium ulcerans 0102]
Length = 198
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
Query: 33 NVHAPIDEAQVLKNKSQEIEPYLSGRCI-YLVGMMGSGKTTVGKILSGVLGYSFFDCDTL 91
+ AP D A +S +P R + LVG G+GKTTVGK L+ L +F D D+L
Sbjct: 4 QIKAPDDSAMKDLEESAVEQPIPRTRPLAVLVGPPGAGKTTVGKRLANALHTTFVDTDSL 63
Query: 92 IEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKG 151
IEQS G IF+ GE FR+ E +++ +L VVS GGGAV P+ +
Sbjct: 64 IEQSA-GQPCGVIFRQMGEPEFRKLEENKVRE-ALGTSGVVSLGGGAVLSPLTRSLLLGH 121
Query: 152 ISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANAR 211
+W+DV E A+R A +SRP+L + Y E + L+ E +N R
Sbjct: 122 TVIWIDVNPEEGAKRTGA--DNSRPILQSQDPIAHYRELVESRRPLYREVSRHRSNTTGR 179
Query: 212 VSLENIAVKLGH 223
+A LG+
Sbjct: 180 GPQRVVADILGY 191
>gi|257464987|ref|ZP_05629358.1| shikimate kinase [Actinobacillus minor 202]
gi|257450647|gb|EEV24690.1| shikimate kinase [Actinobacillus minor 202]
Length = 173
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 86/145 (59%), Gaps = 6/145 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ +LG FFD D++IE+ G + IF + GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQMLGMEFFDSDSVIEERA-GADIDWIFDVEGEAGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ + +V+STGGG+V N + +GI ++L+ ++ +R RP
Sbjct: 64 ERIINELTQGQGIVLSTGGGSVLSKDNRNMLSARGIVIYLETTIDKQFERTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL Q E E L ++ + L+EE
Sbjct: 122 LL-QTEDPRKTLEELAKIRNPLYEE 145
>gi|33594520|ref|NP_882164.1| shikimate kinase [Bordetella pertussis Tohama I]
gi|33594792|ref|NP_882435.1| shikimate kinase [Bordetella parapertussis 12822]
gi|384205817|ref|YP_005591556.1| shikimate kinase [Bordetella pertussis CS]
gi|408416755|ref|YP_006627462.1| shikimate kinase I [Bordetella pertussis 18323]
gi|410470885|ref|YP_006894166.1| shikimate kinase I [Bordetella parapertussis Bpp5]
gi|412340627|ref|YP_006969382.1| shikimate kinase I [Bordetella bronchiseptica 253]
gi|427812324|ref|ZP_18979388.1| shikimate kinase I [Bordetella bronchiseptica 1289]
gi|427817373|ref|ZP_18984436.1| shikimate kinase I [Bordetella bronchiseptica D445]
gi|427823111|ref|ZP_18990173.1| shikimate kinase I [Bordetella bronchiseptica Bbr77]
gi|81578314|sp|Q7VT94.1|AROK_BORPE RecName: Full=Shikimate kinase; Short=SK
gi|81578957|sp|Q7W2B7.1|AROK_BORPA RecName: Full=Shikimate kinase; Short=SK
gi|33564596|emb|CAE43913.1| shikimate kinase I [Bordetella pertussis Tohama I]
gi|33564868|emb|CAE39812.1| shikimate kinase I [Bordetella parapertussis]
gi|332383931|gb|AEE68778.1| shikimate kinase [Bordetella pertussis CS]
gi|401778925|emb|CCJ64394.1| shikimate kinase I [Bordetella pertussis 18323]
gi|408440995|emb|CCJ47404.1| shikimate kinase I [Bordetella parapertussis Bpp5]
gi|408770461|emb|CCJ55255.1| shikimate kinase I [Bordetella bronchiseptica 253]
gi|410563324|emb|CCN20858.1| shikimate kinase I [Bordetella bronchiseptica 1289]
gi|410568373|emb|CCN16408.1| shikimate kinase I [Bordetella bronchiseptica D445]
gi|410588376|emb|CCN03433.1| shikimate kinase I [Bordetella bronchiseptica Bbr77]
Length = 211
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVGMMG+GKTT+G+ L+ L F D D +E G V IF++ GE FR +E
Sbjct: 43 IFLVGMMGAGKTTIGRGLARALRREFIDLDHELEARC-GVRVPVIFEIEGEAGFRRREAA 101
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
LQ+ + RQ++++TGGGAV N + + ++GI ++L +E L +R + +RPLL
Sbjct: 102 ALQECTQRRQIILATGGGAVLAAENRQALRERGIVIYLRASVEELFRRTSR--DRNRPLL 159
Query: 179 HQCESGDAYTEALNRLSTLWEE 200
+ E + L+ E
Sbjct: 160 ATADPRATLRELMVAREPLYNE 181
>gi|296314607|ref|ZP_06864548.1| shikimate kinase [Neisseria polysaccharea ATCC 43768]
gi|296838649|gb|EFH22587.1| shikimate kinase [Neisseria polysaccharea ATCC 43768]
Length = 170
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR +ET
Sbjct: 8 LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFRSRETA 66
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+KL ++ +V+STGGGAV + N ++K G V+L E L +R +RPLL
Sbjct: 67 ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAQPETLLERTRC--DSNRPLL 124
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ L RL L+ R Y
Sbjct: 125 Q-------VADPLGRLRELYTARDPLY 144
>gi|218663081|ref|ZP_03519011.1| shikimate kinase., 3-dehydroquinate synthase [Rhizobium etli
IE4771]
Length = 208
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 46 NKSQEIEP------YLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGT 99
N S I+P L RC+ LVGMMGSGKT+VG+ L+ LG F D D IE +
Sbjct: 2 NMSPNIQPEPALLAALGTRCVVLVGMMGSGKTSVGRPLAARLGLDFVDADAEIE-AAHRM 60
Query: 100 SVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDV 158
++ EIF +GE +FRE E +L +L VV+TGGGA ++ G+S+WL
Sbjct: 61 TIPEIFAQHGETYFREGERRILARLLAGGPKVVATGGGAFMNSETRAHIAATGVSIWLKA 120
Query: 159 PLEAL 163
+ L
Sbjct: 121 DFDIL 125
>gi|91200496|emb|CAJ73544.1| similar to shikimate kinase I [Candidatus Kuenenia stuttgartiensis]
Length = 187
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+L+G G+GKT+VGKIL+ L + D D +EQ +G ++ +IF+ EG FRE E++
Sbjct: 3 IFLIGFRGTGKTSVGKILAQRLNRKYIDADEYLEQK-EGKTIKDIFEECDEGKFREIESD 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAA--VGTDSRP 176
V+ +L L V++TGGG V + N + M+K G+++ L+ + L +RI T RP
Sbjct: 62 VIAELCLQNNTVIATGGGVVIKEENVKRMKKCGVAILLEADADTLYKRIKGDITSTTKRP 121
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKL 221
L L + L+++ + N ++S++ A K+
Sbjct: 122 GLTNYGEYQEIRYLLGKRKPLYDKTADFVVNT-GKMSIDEAAGKI 165
>gi|78064966|ref|YP_367735.1| shikimate kinase [Burkholderia sp. 383]
gi|115312141|sp|Q39KC5.1|AROK_BURS3 RecName: Full=Shikimate kinase; Short=SK
gi|77965711|gb|ABB07091.1| shikimate kinase [Burkholderia sp. 383]
Length = 184
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++ VG+MG+GKTTVG+ ++ L +FFD D IE G + IF++ GE FR++ET+
Sbjct: 10 VFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEIEART-GARIPVIFEMEGEAGFRDRETQ 68
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+ L+ +V++TGGGAV RP N ++ GI V+L L R +RPLL
Sbjct: 69 VITDLTQRENIVLATGGGAVLRPENRDCLKNNGIVVYLRANPHDLWLRTRK--DKNRPLL 126
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
Q E + RL L+E R Y
Sbjct: 127 -QTE------DPKGRLEALYEVRDPLY 146
>gi|115522173|ref|YP_779084.1| shikimate kinase [Rhodopseudomonas palustris BisA53]
gi|115516120|gb|ABJ04104.1| shikimate kinase [Rhodopseudomonas palustris BisA53]
Length = 205
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L + L+GMMG+GK+TVG+ L+ LG F D DT IE + G ++ EIF+ +GE FR
Sbjct: 22 LGRHSVVLIGMMGAGKSTVGRRLAVRLGLPFVDADTEIEAAA-GMTIPEIFETHGEPHFR 80
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
+ E V+ +L V++TGGGA R R G+S+WL + + +R+
Sbjct: 81 DGEARVIARLLEGGPHVLATGGGAFMREETRARIAAHGVSLWLQADADVILRRVKRRA-- 138
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
RPLL + ++ L +ER Y A ++ ++
Sbjct: 139 DRPLLKTADPAAT-------IARLIDERHPMYQTAEITIASRDV 175
>gi|419802103|ref|ZP_14327304.1| shikimate kinase 1 [Haemophilus parainfluenzae HK262]
gi|385191425|gb|EIF38839.1| shikimate kinase 1 [Haemophilus parainfluenzae HK262]
Length = 180
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 84/145 (57%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMDFVDSDAVIEERA-GADISWIFDLEGEEGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ ++ +V+STGGGAV + Y+ +GI ++L+ ++ QR RP
Sbjct: 64 ERIINELTQLQGVVLSTGGGAVMSKESRNYLSARGIVIYLETTVDKQYQRTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL + E L ++ + L+EE
Sbjct: 122 LLQGADDPRQVLEDLAKVRNPLYEE 146
>gi|317128394|ref|YP_004094676.1| shikimate kinase [Bacillus cellulosilyticus DSM 2522]
gi|315473342|gb|ADU29945.1| shikimate kinase [Bacillus cellulosilyticus DSM 2522]
Length = 168
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 81/145 (55%), Gaps = 9/145 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ IYL+G MG+GKTT+G++L+ G F D D LI + S+ +IF+ +GE FR +E
Sbjct: 2 KNIYLIGFMGAGKTTIGQLLAKEAGAPFIDLDELISEKSQ-LSIPDIFEQFGEDGFRRRE 60
Query: 118 TEVLQKLSLMRQ-LVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSR 175
TE L+ S R +++TGGG V R N M+ G V+LDVP E + +RI +R
Sbjct: 61 TEALK--SCHRNGTIIATGGGIVERRENIEIMKNSGTIVFLDVPFEKIYERIQ--DDPNR 116
Query: 176 PLLHQCESGDAYTEALNRLSTLWEE 200
P+ DA E + L++E
Sbjct: 117 PITKF--GRDALKERYTKRLPLYKE 139
>gi|375290999|ref|YP_005125539.1| shikimate kinase [Corynebacterium diphtheriae 241]
gi|376245830|ref|YP_005136069.1| shikimate kinase [Corynebacterium diphtheriae HC01]
gi|376251414|ref|YP_005138295.1| shikimate kinase [Corynebacterium diphtheriae HC03]
gi|376257229|ref|YP_005145120.1| shikimate kinase [Corynebacterium diphtheriae VA01]
gi|371580670|gb|AEX44337.1| shikimate kinase [Corynebacterium diphtheriae 241]
gi|372108460|gb|AEX74521.1| shikimate kinase [Corynebacterium diphtheriae HC01]
gi|372112918|gb|AEX78977.1| shikimate kinase [Corynebacterium diphtheriae HC03]
gi|372119746|gb|AEX83480.1| shikimate kinase [Corynebacterium diphtheriae VA01]
Length = 182
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 91/179 (50%), Gaps = 7/179 (3%)
Query: 47 KSQEIEPYLSGRC---IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAE 103
Q +E +SGR + LVG G+GKTT+G+ L+ L S D D LIEQ + G
Sbjct: 2 NDQLLESDVSGRVRPIVVLVGPPGAGKTTIGRRLANALNTSVVDSDVLIEQ-LQGKPCGV 60
Query: 104 IFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEAL 163
+F GE FR+ E EV+ +L VVS GGGAVT + +++ I VW+DV
Sbjct: 61 VFAELGEPNFRDLEAEVID-FALTTAGVVSLGGGAVTTESVRQKLREQIVVWVDVSAAEG 119
Query: 164 AQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLG 222
R A +SRPLL + Y+E L + ++E + A+ + R + +A LG
Sbjct: 120 VHRTAV--ENSRPLLDTTNPLERYSELLAQRRDFYKEVADYRAHTDGRSPQQIVADILG 176
>gi|358062547|ref|ZP_09149190.1| shikimate kinase [Clostridium hathewayi WAL-18680]
gi|356699171|gb|EHI60688.1| shikimate kinase [Clostridium hathewayi WAL-18680]
Length = 169
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 92/167 (55%), Gaps = 18/167 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G MG+GKT+VG+ L+G G + D D +IE+ G S+++IF + GE FR ETE
Sbjct: 6 MILIGFMGAGKTSVGEELAGRFGKTLIDTDRMIEERA-GMSISDIFAVQGEEAFRRLETE 64
Query: 120 VLQKL-SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPL 177
VL++L S ++S GGG R N + ++K G ++L V E + R+ G +RPL
Sbjct: 65 VLEQLISEASGEMISVGGGLPLREENRKLLKKLGTVIYLRVRPETVLARLK--GDTTRPL 122
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANANARV------SLENIA 218
L GD E +N +L +RG Y A R+ S+E IA
Sbjct: 123 LQ----GDDVEEKVN---SLLSKRGPIYEMAADRIISVDGRSVEQIA 162
>gi|320539811|ref|ZP_08039470.1| putative shikimate kinase I [Serratia symbiotica str. Tucson]
gi|320029997|gb|EFW12017.1| putative shikimate kinase I [Serratia symbiotica str. Tucson]
Length = 173
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L FFD D IEQ G V +F + GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMEFFDSDQEIEQRT-GADVGWVFDVEGEAGFRDRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SR 175
+V+ +L+ + +V++TGGG+V +R R +G+ V+L+ +E +++A D R
Sbjct: 64 EKVINELTENKGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKR 120
Query: 176 PLLHQCESGDAYTEALNR-LSTLWEE 200
PLL EAL + + L+EE
Sbjct: 121 PLLQVDSPPREVLEALAKERNPLYEE 146
>gi|89068932|ref|ZP_01156314.1| shikimate kinase [Oceanicola granulosus HTCC2516]
gi|89045513|gb|EAR51577.1| shikimate kinase [Oceanicola granulosus HTCC2516]
Length = 173
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 84/152 (55%), Gaps = 11/152 (7%)
Query: 62 LVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL 121
L+GMMGSGKT +GK L+ L F D D IE + S+AEIF+ GE FFR++ETEV+
Sbjct: 2 LIGMMGSGKTAIGKSLAARLEVPFLDSDHEIEAAAA-ASIAEIFERDGEAFFRDRETEVI 60
Query: 122 QKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
++L V+STGGGA N R + G ++WLD LE L +R+ T RPLL
Sbjct: 61 RRLLRGAPFVLSTGGGAWLAERNRRIIAASGTALWLDADLELLWERVRHRAT--RPLLRT 118
Query: 181 CESGDAYTEALNRLSTLWEERGEAYANANARV 212
+ L+ L EER YA A RV
Sbjct: 119 ADPKGT-------LARLLEERAPLYALAGLRV 143
>gi|297182654|gb|ADI18812.1| shikimate kinase [uncultured SAR11 cluster bacterium HF4000_37C10]
Length = 160
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 18/164 (10%)
Query: 65 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR-EKETEVLQK 123
MM GKTT+GKI++ F D D IE+ + ++ EIFK GE FFR E+E E+L+
Sbjct: 1 MMAVGKTTLGKIVAKKQELKFIDIDASIEKK-NSMTIREIFKKKGEKFFRMEEENEILKS 59
Query: 124 LSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 182
L V++ GGGA + + + ++ IS+WL+V ++ L QR+ RPLL +
Sbjct: 60 LE-KNNCVIALGGGAFMNKTVRENILKNAISIWLNVDIKTLNQRVK--WNQKRPLLKE-- 114
Query: 183 SGDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 221
+ Y + +++ L+ ER Y AN ++ S +NIA K+
Sbjct: 115 --ENYQK---KITKLYAERKNIYKLANHQIACDKLSKDNIAEKI 153
>gi|156740117|ref|YP_001430246.1| shikimate kinase [Roseiflexus castenholzii DSM 13941]
gi|156231445|gb|ABU56228.1| Shikimate kinase [Roseiflexus castenholzii DSM 13941]
Length = 173
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I LVG+ G GK+TV + L+ LG+ D D L+EQ + G ++ IF GEG FRE+ET
Sbjct: 7 IALVGLSGGGKSTVARHLAARLGWRVCDTDGLVEQ-MAGRTIPAIFADEGEGAFRERETV 65
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
L +V+TGGG V R N + +K VWLD P + L R+ A + RPLL
Sbjct: 66 ALMAALTEPNTIVATGGGIVLRDRNRALLREKAFVVWLDAPTDVLIARLRA-HDEERPLL 124
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYAN 207
+GD + RL TL +R Y +
Sbjct: 125 ----AGD---DPAARLETLRAQRAALYRD 146
>gi|241759403|ref|ZP_04757507.1| shikimate kinase [Neisseria flavescens SK114]
gi|241320185|gb|EER56518.1| shikimate kinase [Neisseria flavescens SK114]
Length = 170
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G+MG+GKTT+GK L+ + F+D D I S G ++ IF++ GE FR +ET
Sbjct: 8 LILIGLMGAGKTTLGKQLAQMFECPFYDSDYEICTS-SGVTIPTIFEMEGEEGFRNRETN 66
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L+KL+ R +V+STGGG+V R N + + Q G V+L E L +R +RPLL
Sbjct: 67 MLKKLASRRNIVLSTGGGSVLRSENRQILRQNGTVVYLHASPETLLERTRY--DSNRPLL 124
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
L +L L+++R Y
Sbjct: 125 Q-------VANPLAKLQELYDQRDTLY 144
>gi|115312137|sp|Q89XW7.2|AROK_BRAJA RecName: Full=Shikimate kinase; Short=SK
Length = 207
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R I LVGMMG GK+T+G+ ++ L F D DT IE + G ++ EIF+ +GEG FR
Sbjct: 20 LGARSIVLVGMMGVGKSTIGRRMAARLKLPFVDADTEIEAAA-GMTIPEIFERHGEGHFR 78
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWL 156
+ E V+ +L +V++TGGGA R R K +S+WL
Sbjct: 79 DGEARVIARLLDGGPVVLATGGGAFMREETRARIAAKAVSIWL 121
>gi|392540434|ref|ZP_10287571.1| shikimate kinase I [Pseudoalteromonas piscicida JCM 20779]
Length = 172
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 77/135 (57%), Gaps = 4/135 (2%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ ++ L FFD D IE+ G ++ +F + GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRHIADQLHLEFFDSDQEIERRT-GADISWVFDIEGEEGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRP 176
V+ L+ M+ +V++TGGG+V ++ + + +GI V+L+ P+E R RP
Sbjct: 64 ESVISDLTEMQGIVLATGGGSVISKEVRNKLSARGIVVYLETPIEKQVARTQR--GKRRP 121
Query: 177 LLHQCESGDAYTEAL 191
LL E E L
Sbjct: 122 LLQTSEDSRDVLERL 136
>gi|424864429|ref|ZP_18288333.1| shikimate kinase [SAR86 cluster bacterium SAR86B]
gi|400759858|gb|EJP74039.1| shikimate kinase [SAR86 cluster bacterium SAR86B]
Length = 169
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I++VG MGSGK+TVGKI+S L +F D D IE G S+ IF L GE FR++ET+
Sbjct: 3 IFIVGPMGSGKSTVGKIISDELFLTFHDTDEEIENRT-GASIDWIFDLEGEEGFRKRETK 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+L +L+ + +V+STGGG + N + +G +L P+ +R + RPLL
Sbjct: 62 ILDELAQLNSIVLSTGGGIILSDKNRDTLSSRGTVFYLATPISVQLERTSK--DKDRPLL 119
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYAN-ANARVSLENIA 218
++GD T L L E R E Y + A+ V+ EN+
Sbjct: 120 ---KNGDPET----ILKELHETREELYESVADYVVNTENLT 153
>gi|257068667|ref|YP_003154922.1| shikimate kinase [Brachybacterium faecium DSM 4810]
gi|256559485|gb|ACU85332.1| shikimate kinase [Brachybacterium faecium DSM 4810]
Length = 204
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 79/151 (52%), Gaps = 10/151 (6%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
++G L+G M +GKT+VG+ L+ L F D D LI ++ DG S+ EIF GE FR
Sbjct: 1 MTGPLAILIGPMAAGKTSVGRALASRLEVPFADLDALIVEA-DGRSIPEIFAADGENTFR 59
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E E L + L ++S GGGA P + ++ G +WLDV EA+A R A G+
Sbjct: 60 ELEAATLARALLEHPGILSLGGGAPMHPASAERLRGGPVIWLDV-DEAIAARRLAHGS-G 117
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
RPLL Q E + + R L ER Y
Sbjct: 118 RPLL-QGE------DPMGRWRELARERSPRY 141
>gi|306820204|ref|ZP_07453847.1| shikimate kinase [Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|304551750|gb|EFM39698.1| shikimate kinase [Eubacterium yurii subsp. margaretiae ATCC 43715]
Length = 184
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 82/147 (55%), Gaps = 18/147 (12%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I ++GM GSGKTT+ + L+ + F D D+LI S + S+AEIF+ YGE +FR+ E++
Sbjct: 19 IAIIGMPGSGKTTLSEKLADLSKKDFVDVDSLI-VSENNISIAEIFEKYGEAYFRKLESD 77
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
++Q+LSLM V+STGGG V N +++ I V++ LE L T RPL
Sbjct: 78 MIQRLSLMDDTVISTGGGCVKNEDNINNLRRNAIIVYVKRDLEKLE-------TSGRPL- 129
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+G L + L+EER Y
Sbjct: 130 ---SAG-----GLESVKKLFEERQALY 148
>gi|238928089|ref|ZP_04659849.1| shikimate kinase [Selenomonas flueggei ATCC 43531]
gi|238884049|gb|EEQ47687.1| shikimate kinase [Selenomonas flueggei ATCC 43531]
Length = 173
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 20/177 (11%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G MG+GK++VG++L+ LG +F D D IE++ G S+ ++F +GE +FR +E E
Sbjct: 4 VVLIGFMGTGKSSVGRLLAMRLGCAFHDLDKKIEETC-GISIPQMFAQHGEPYFRAREKE 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
++ + LV++TGGG V N ++ GI V L ++ + R AA G +RP+L
Sbjct: 63 AVRAAAARSGLVIATGGGTVKDAENVALLRSSGILVALTADVDTILCRTAARG--ARPVL 120
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIA 235
++GD + L EER Y A +IAV D S +P+ +A
Sbjct: 121 DGADAGDRRAAVVR----LLEERRALYEGA-------DIAV-----DTSCRSPLEVA 161
>gi|452820465|gb|EME27507.1| shikimate kinase [Galdieria sulphuraria]
Length = 184
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 50 EIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYG 109
E+ L R IYLVGMMGSGK+T+G+ L+ L YSF D D +IEQ V+ + +IF+ G
Sbjct: 72 ELNQRLRKRPIYLVGMMGSGKSTIGQCLASKLSYSFLDTDQVIEQ-VEQKKITQIFEQDG 130
Query: 110 EGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ 149
E FRE E+ +L ++ VV+TGGG V R NW ++
Sbjct: 131 EDKFREVESNILNQIQPCLGYVVATGGGIVLRSSNWSILR 170
>gi|114566079|ref|YP_753233.1| shikimate kinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337014|gb|ABI67862.1| shikimate kinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 168
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 91/161 (56%), Gaps = 10/161 (6%)
Query: 57 GRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK 116
G+ I L+G MG+GK++VG+ L+ L +F D D IE+ + G S+ +IF+ +GE FR +
Sbjct: 2 GKNIVLIGFMGTGKSSVGQRLAEKLKMAFIDMDREIEK-ITGLSINQIFRKHGEIRFRSE 60
Query: 117 ETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSR 175
E + QKL LV++TGGG V R N +++ GI + L+ E + +R+ SR
Sbjct: 61 EKLLAQKLGHESNLVIATGGGVVLRQENIEALRENGILICLEASPEEILKRVKR-KKASR 119
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 216
PL+ + E G+ +A + EER YA + R++ N
Sbjct: 120 PLIKK-EYGEEEIKA------MLEEREAFYACTDFRINTNN 153
>gi|300313470|ref|YP_003777562.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Herbaspirillum seropedicae SmR1]
gi|300076255|gb|ADJ65654.1| bifunctional enzyme: 3-dehydroquinate synthase/shikimate kinase
[Herbaspirillum seropedicae SmR1]
Length = 596
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 77/125 (61%), Gaps = 6/125 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVG+MG+GKTT+G+ L+ L F D D IE G ++ IF++ GE FR +E E
Sbjct: 5 IFLVGLMGAGKTTIGRALAKKLNKRFIDSDHEIEART-GATIPVIFEIEGEENFRRREAE 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGIS-VWLDVPLEALAQRIAAVGTD-SRPL 177
V+++L+ + +V++TGGGA+ R N ++KG + V+L + + QR G D +RPL
Sbjct: 64 VIRELTALPDIVLATGGGAILRAENRDNLKKGGTVVYLRASINQILQR---TGRDKNRPL 120
Query: 178 LHQCE 182
L +
Sbjct: 121 LQTAD 125
>gi|354582434|ref|ZP_09001336.1| Shikimate kinase [Paenibacillus lactis 154]
gi|353199833|gb|EHB65295.1| Shikimate kinase [Paenibacillus lactis 154]
Length = 161
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 24/184 (13%)
Query: 62 LVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL 121
++GMMG+GK+TVG++++ L YS D D IE+ G S+ +IF GEG FR+ ET L
Sbjct: 1 MIGMMGTGKSTVGRLVADHLNYSLVDLDAEIERMA-GKSIPDIFAADGEGCFRDIETAAL 59
Query: 122 QKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQ 180
+++ +++TGGGAV RP N M++ G V L + + +R+ G +RPLL
Sbjct: 60 REVLHRTSQIIATGGGAVLRPENCEAMKRGGWVVALTADADTIVERVR--GDANRPLL-- 115
Query: 181 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALE 240
+G+ R+ ++ ER + Y A+ V D + LT +A E L
Sbjct: 116 --AGNVE----ERVQSILMERADKYRFADLMV------------DTAGLTADEVAAEILM 157
Query: 241 QIEG 244
G
Sbjct: 158 HYRG 161
>gi|417741008|ref|ZP_12389573.1| shikimate kinase family protein [Shigella flexneri 4343-70]
gi|332750365|gb|EGJ80776.1| shikimate kinase family protein [Shigella flexneri 4343-70]
Length = 173
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L F+D D IE+ G V +F L GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRT-GADVGWVFDLEGEEGFRDRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SR 175
+V+ +L+ + +V++TGGG+V +R R +G+ V+L+ +E +++A D R
Sbjct: 64 EKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKR 120
Query: 176 PLLHQCESGDAYTEAL-NRLSTLWEE 200
PLLH E L N + L+EE
Sbjct: 121 PLLHVETPPREVLEVLANERNPLYEE 146
>gi|323489059|ref|ZP_08094295.1| shikimate kinase [Planococcus donghaensis MPA1U2]
gi|323397284|gb|EGA90094.1| shikimate kinase [Planococcus donghaensis MPA1U2]
Length = 186
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 11/161 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I +G MG GKTTVGK+L+ L +F D D IE+ + +IF+ YGE FR KE
Sbjct: 11 KSIVCIGFMGVGKTTVGKLLAQKLYRNFVDIDAEIEKEF-AMPIPQIFEQYGEQVFRAKE 69
Query: 118 TEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRP 176
++++K S ++S GGGA + + I M I ++LD+ E+ RI + TD+RP
Sbjct: 70 KDLIEKYSKQPLNIISVGGGAFLQKEIQDMCMTNCIVLFLDISWESWKDRIQIL-TDNRP 128
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
LL +L + +L+ ER +Y+ +++ ++N
Sbjct: 129 LLK--------GRSLEDIKSLFLERQNSYSLNHSKFQVDNF 161
>gi|347541427|ref|YP_004848853.1| shikimate kinase [Pseudogulbenkiania sp. NH8B]
gi|345644606|dbj|BAK78439.1| shikimate kinase [Pseudogulbenkiania sp. NH8B]
Length = 182
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+LVG+MG+GKTTVG+ L+ G +F+D D IE G VA IF++ GE FR++E+
Sbjct: 8 FFLVGLMGAGKTTVGRALARKTGKTFYDSDHEIEAKT-GVKVATIFEIEGEQRFRDRESC 66
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+ +L ++++TGGGA+ RP N + ++ G+ ++L ++ L R +RPLL
Sbjct: 67 AIAELVQRDNIILATGGGAILRPENRQLLKDNGVVIYLRANIDDLLARTQH--DRNRPLL 124
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ +L +L +ER Y
Sbjct: 125 QTADPK-------AKLESLLKERDPLY 144
>gi|94500409|ref|ZP_01306941.1| shikimate kinase [Bermanella marisrubri]
gi|94427444|gb|EAT12422.1| shikimate kinase [Oceanobacter sp. RED65]
Length = 175
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 95/172 (55%), Gaps = 9/172 (5%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+YLVG MG+GK+T+G++LS L F D D IE G ++ IF + GE FR++E++
Sbjct: 6 VYLVGPMGAGKSTIGRLLSQELKLEFIDSDKEIEDRC-GCNIPWIFDVEGEQGFRDRESQ 64
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTD-SRPL 177
+ ++ ++++TGGGAV RP N +++ +G V+L +E Q++A D +RPL
Sbjct: 65 AIDDITQQSGILLATGGGAVNRPENRQHLSARGTVVYLCTSVE---QQLARTEKDKNRPL 121
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYAN---ANARVSLENIAVKLGHKDV 226
L + E + + L+ E + + +N ++ ++ I KL +V
Sbjct: 122 LQRPNPKKVLQELMVQRDPLYREVADIIVHTDESNPKLVVQEIIDKLQELNV 173
>gi|169824935|ref|YP_001692546.1| shikimate 5-dehydrogenase [Finegoldia magna ATCC 29328]
gi|167831740|dbj|BAG08656.1| shikimate 5-dehydrogenase [Finegoldia magna ATCC 29328]
Length = 403
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I LVGM GSGK+TV KI++ G D D +I Q +++IF GE +FR+ E+E
Sbjct: 247 IALVGMPGSGKSTVAKIIAKNTGKKLVDIDKIITQRY--GDISDIFAAQGENYFRKIESE 304
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQR 166
VL++ S + LV++TGGGAVT N+ Y+ Q + W+D P L+++
Sbjct: 305 VLEEFSKEKNLVIATGGGAVTVKKNFYYLHQNSVVYWIDRPNSKLSRK 352
>gi|384227954|ref|YP_005619699.1| shikimate kinase I [Buchnera aphidicola str. Ak (Acyrthosiphon
kondoi)]
gi|345538894|gb|AEO08871.1| shikimate kinase I [Buchnera aphidicola str. Ak (Acyrthosiphon
kondoi)]
Length = 173
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 4/135 (2%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ LS L FFD D IE+ G +++ +F L GE FR +E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLSQQLNMEFFDSDQEIEKRT-GANISWVFDLEGEDGFRLRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 176
+++ +L++ + +V++TGGG+VT ++ +GI V+L+ +E R T RP
Sbjct: 64 RKIIDELTIKQGIVLATGGGSVTFKETRNFLSSRGIVVYLETTIEKQLTRTKRDKT--RP 121
Query: 177 LLHQCESGDAYTEAL 191
LL S E L
Sbjct: 122 LLQSATSNRVVLENL 136
>gi|430005369|emb|CCF21170.1| shikimate kinase I [Rhizobium sp.]
Length = 197
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 87/171 (50%), Gaps = 11/171 (6%)
Query: 48 SQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKL 107
+++ L R + VG+MG+GK+ +GK+++ L F D D IE+ V ++AE+F
Sbjct: 14 AEQARAALGKRNLVFVGLMGAGKSVIGKMVAQALSIPFVDTDGEIEK-VSRMTIAELFAS 72
Query: 108 YGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQR 166
YGE FR E V+ +L V+STGGGA R + Q GISVWL L+ L +R
Sbjct: 73 YGEPEFRALEARVIDRLLKGGPRVISTGGGAFINDNTRRLIKQGGISVWLKADLDVLWER 132
Query: 167 IAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
+ D RPLL + E+ A L L R YA A+ V N+
Sbjct: 133 VNK--RDHRPLL-KTENPKAT------LENLMNHRYPIYAEADLTVYSGNV 174
>gi|409408007|ref|ZP_11256451.1| 3-dehydroquinate synthase/shikimate kinase [Herbaspirillum sp.
GW103]
gi|386432463|gb|EIJ45290.1| 3-dehydroquinate synthase/shikimate kinase [Herbaspirillum sp.
GW103]
Length = 599
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 81/143 (56%), Gaps = 6/143 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVG+MG+GKTT+G+ L+ L F D D IE G ++ IF++ GE FR +E E
Sbjct: 5 IFLVGLMGAGKTTIGRALAKKLNKRFVDSDHEIEART-GATIPVIFEIEGEENFRRREAE 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGIS-VWLDVPLEALAQRIAAVGTD-SRPL 177
V+++L+ +V++TGGGA+ R N ++KG + V+L + + QR G D +RPL
Sbjct: 64 VIRELAAQPDIVLATGGGAILRAENRENLKKGGTVVYLRASINQILQR---TGRDKNRPL 120
Query: 178 LHQCESGDAYTEALNRLSTLWEE 200
L + E + L+ E
Sbjct: 121 LQTADPRRKLEELSRQRDPLYRE 143
>gi|315633543|ref|ZP_07888833.1| shikimate kinase [Aggregatibacter segnis ATCC 33393]
gi|315477585|gb|EFU68327.1| shikimate kinase [Aggregatibacter segnis ATCC 33393]
Length = 175
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 82/145 (56%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ +L F D D IE+ G + IF + GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQLLNMDFVDTDAEIEERA-GADIGWIFDVEGEEGFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ + +V+STGGGAV N ++ +GI V+L+ +E QR RP
Sbjct: 64 ERLINELTQRQGIVLSTGGGAVLSKDNRNHLSARGIVVYLETTVEKQYQRTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL + E L ++ + L+EE
Sbjct: 122 LLQDVDDPRQVLEDLAKVRNPLYEE 146
>gi|308048043|ref|YP_003911609.1| shikimate kinase [Ferrimonas balearica DSM 9799]
gi|307630233|gb|ADN74535.1| Shikimate kinase [Ferrimonas balearica DSM 9799]
Length = 171
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 94/170 (55%), Gaps = 9/170 (5%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ +L FFD D IE + G ++ IF + GE FR +E
Sbjct: 5 RNIFLVGPMGAGKSTIGRHLAQMLHLEFFDSDQEIE-ARSGADISWIFDVEGEEGFRNRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS-R 175
V+ +L+ + +V++TGGG+V ++ + R +GI V+L+ ++ +++A D R
Sbjct: 64 ARVIHELTEKQGIVLATGGGSVQSKEVRNRLSARGIVVYLETTID---KQVARTQRDKRR 120
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANAN---ARVSLENIAVKLG 222
PLL E D + + L++E + + A+V I KLG
Sbjct: 121 PLLQVDEPRDVLEQLAEERNPLYQEIADLVVRTDEQSAKVVANQIIEKLG 170
>gi|257784463|ref|YP_003179680.1| shikimate kinase [Atopobium parvulum DSM 20469]
gi|257472970|gb|ACV51089.1| shikimate kinase [Atopobium parvulum DSM 20469]
Length = 436
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 48 SQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKL 107
SQEI + S I L+GM G GKT+ G+ L+ +L + D D LIEQ V + A +
Sbjct: 272 SQEI--HSSKENIVLIGMPGVGKTSTGEALAKLLNRPWIDTDFLIEQKVH-CNAATYLQT 328
Query: 108 YGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALA 164
YGE FR E E++Q++S M +V+S GGGAV P N++ + Q G ++L PLE LA
Sbjct: 329 YGEAAFRSLEHEIIQEISSMTGVVISCGGGAVVTPSNYQLLRQNGKLIYLTRPLENLA 386
>gi|119505542|ref|ZP_01627614.1| shikimate kinase [marine gamma proteobacterium HTCC2080]
gi|119458651|gb|EAW39754.1| shikimate kinase [marine gamma proteobacterium HTCC2080]
Length = 172
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 83/142 (58%), Gaps = 4/142 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++LVG MG+GK+TVG+ L+ +LG+ F D D IE G + IF++ GE FR++ET+
Sbjct: 1 MFLVGPMGAGKSTVGRALAQILGFEFVDSDAEIEART-GADIPWIFEIEGESGFRDRETK 59
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+++++ +V++TGGGA+ R N + ++G V+L+ L +R + RPLL
Sbjct: 60 VIEEVTSRDTVVMATGGGAILRGENRSVLSRRGFVVYLEATLREQIRRTSK--DQQRPLL 117
Query: 179 HQCESGDAYTEALNRLSTLWEE 200
+ TE + L++E
Sbjct: 118 AGQDRRRVLTELMTTREPLYKE 139
>gi|451936774|ref|YP_007460628.1| shikimate kinase [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
gi|451777697|gb|AGF48672.1| shikimate kinase [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
Length = 211
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
Query: 46 NKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIF 105
N ++E PY + I+L+GMMGSGKTT+G+ +S +L F D D IE G S+ IF
Sbjct: 29 NITKENLPYDTP--IFLIGMMGSGKTTIGRNISNILDRKFIDLDFAIETRC-GVSITTIF 85
Query: 106 KLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALA 164
++ GE FR++E VL + S V++TGGG+V N ++K GI V+ ++ L
Sbjct: 86 EIEGEQGFRKREEVVLSECSNETNTVLATGGGSVLSHYNREILKKRGIVVYFQASIDDLF 145
Query: 165 QRIAAVGTDSRPLL 178
QR + +RPLL
Sbjct: 146 QRTSL--DSNRPLL 157
>gi|302379675|ref|ZP_07268160.1| shikimate kinase [Finegoldia magna ACS-171-V-Col3]
gi|302312582|gb|EFK94578.1| shikimate kinase [Finegoldia magna ACS-171-V-Col3]
Length = 403
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 10/117 (8%)
Query: 62 LVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL 121
LVGM GSGK+TV KI++ G D D +I Q +++IF GE +FR+ E+EVL
Sbjct: 249 LVGMPGSGKSTVAKIIAKNTGKKLVDIDKIITQRY--GDISDIFAAQGENYFRKIESEVL 306
Query: 122 QKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPL 177
++ S + LV++TGGGAVT N+ Y+ Q + W+D P L+++ +RP+
Sbjct: 307 EEFSKEKNLVIATGGGAVTVKKNFYYLHQNSVVYWIDRPNSKLSKK-------NRPI 356
>gi|121603589|ref|YP_980918.1| shikimate kinase [Polaromonas naphthalenivorans CJ2]
gi|120592558|gb|ABM35997.1| shikimate kinase [Polaromonas naphthalenivorans CJ2]
Length = 182
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 90/172 (52%), Gaps = 17/172 (9%)
Query: 59 CIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKET 118
+ LVG+ GSGK+T+G+ L+ L SF D D +IE+ + G S+ + F+ GE FR+ E
Sbjct: 10 SVALVGLPGSGKSTIGRQLARRLKLSFLDSDHVIEERL-GCSIRDYFEREGEASFRDVEE 68
Query: 119 EVLQKLSLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPL 177
V+ +L+ M V+STGGG+V RP N R ++G V+L E L +R+ SRPL
Sbjct: 69 AVIDELTGMASGVLSTGGGSVLRPANRQRLHERGHVVYLRSSPEELFRRLRH--DVSRPL 126
Query: 178 LHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 229
L + L RL L+ +R Y + ++ G VS+L
Sbjct: 127 LQ-------VADPLGRLRDLYAQRDPLYRETA------HFVIETGRPSVSTL 165
>gi|260220230|emb|CBA27561.1| Shikimate kinase [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 176
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I LVG+ GSGKTTVG+ L+ L F D D IE + G S+ E F GE FR+ E E
Sbjct: 3 ISLVGLPGSGKTTVGRQLARRLRIPFVDSDHAIEARI-GCSIREFFDREGESRFRDIEEE 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VL LS V+STGGGAV RP N ++ +G ++L E L +R+ SRPLL
Sbjct: 62 VLDALSANVNCVLSTGGGAVLRPNNRHHLHSRGKVIYLKSTPEELFRRLRH--DVSRPLL 119
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ L R+ L+ R Y
Sbjct: 120 Q-------VADPLTRMRELFSVRDPLY 139
>gi|158320657|ref|YP_001513164.1| shikimate kinase [Alkaliphilus oremlandii OhILAs]
gi|229508587|sp|A8MFK5.1|AROK_ALKOO RecName: Full=Shikimate kinase; Short=SK
gi|158140856|gb|ABW19168.1| Shikimate kinase [Alkaliphilus oremlandii OhILAs]
Length = 169
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 86/162 (53%), Gaps = 5/162 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I LVG M GKTT+GK+L+ L Y+F D D IE+ + S++EIF+L GE +FR+KE
Sbjct: 3 KNIVLVGFMAVGKTTLGKLLADQLDYNFIDLDLFIEKK-ESMSISEIFRLKGEAYFRQKE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAAVGTDSRP 176
+E L LS + Q V++TGGG V N + Q G ++L+ + I RP
Sbjct: 62 SEALDLLSDVEQSVIATGGGTVISEENRSKLKQIGRVIYLEAEPSWILTNIKRSAV-IRP 120
Query: 177 LL-HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 217
LL + +S D E L +E E + R +LE I
Sbjct: 121 LLVDERKSMDKIIEILENRRLYYEGTSEIKIPVSHR-TLEEI 161
>gi|196034912|ref|ZP_03102319.1| shikimate kinase [Bacillus cereus W]
gi|218905371|ref|YP_002453205.1| shikimate kinase [Bacillus cereus AH820]
gi|226729117|sp|B7JMV9.1|AROK_BACC0 RecName: Full=Shikimate kinase; Short=SK
gi|195992451|gb|EDX56412.1| shikimate kinase [Bacillus cereus W]
gi|218538002|gb|ACK90400.1| shikimate kinase [Bacillus cereus AH820]
Length = 165
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 90/164 (54%), Gaps = 13/164 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ IY+ G MG+GKTT+GK LS L D D IE++ + ++ +IF GE FRE E
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELHMDVVDTDQKIEENQE-KAILDIFAEEGEMAFREYE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+E+L+ L + R +++TGGG + R N ++M++ GI V+L +A+R+ T RP
Sbjct: 61 SEMLRSLPV-RNAIITTGGGIIEREENRKWMKENGIVVYLYCDPHVIAERLREDTT--RP 117
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 220
L Q + DA+ T +E R Y A+ + N +VK
Sbjct: 118 LF-QKKDIDAFV-------TKFESRRAYYEEAHIHIDTTNKSVK 153
>gi|251793893|ref|YP_003008625.1| shikimate kinase [Aggregatibacter aphrophilus NJ8700]
gi|422337154|ref|ZP_16418126.1| shikimate kinase [Aggregatibacter aphrophilus F0387]
gi|247535292|gb|ACS98538.1| shikimate kinase [Aggregatibacter aphrophilus NJ8700]
gi|353345706|gb|EHB89997.1| shikimate kinase [Aggregatibacter aphrophilus F0387]
Length = 175
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 82/145 (56%), Gaps = 5/145 (3%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ +L F D D IE+ G + IF + GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQLLSMDFVDTDAEIEERA-GADIGWIFDVEGEARFRKRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
++ +L+ + +V+STGGGA+ + ++ +GI V+L+ +E QR RP
Sbjct: 64 ERIINELTQRQGIVLSTGGGAILSKESRNHLSARGIVVYLETTVEKQYQRTQR--DKKRP 121
Query: 177 LLHQCESGDAYTEALNRL-STLWEE 200
LL E E L ++ + L+EE
Sbjct: 122 LLQDVEDPRQVLEDLAKVRNPLYEE 146
>gi|34496283|ref|NP_900498.1| shikimate kinase [Chromobacterium violaceum ATCC 12472]
gi|81656723|sp|Q7NZU3.1|AROK_CHRVO RecName: Full=Shikimate kinase; Short=SK
gi|34102136|gb|AAQ58503.1| shikimate kinase [Chromobacterium violaceum ATCC 12472]
Length = 184
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 79/147 (53%), Gaps = 11/147 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+LVG+MG+GKTTVG+ L+ G +F+D D IE G VA IF + GE FR +E
Sbjct: 11 FFLVGLMGAGKTTVGRALARRTGKTFYDSDQEIEART-GVRVATIFDIEGEMRFRNREAC 69
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V++ L+ R +V++TGGGAV R N + + G ++L ++ L R +RPLL
Sbjct: 70 VIRDLAQQRDIVLATGGGAVLREENRKVLASHGTVIYLRASIDDLLARTQH--DKNRPLL 127
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAY 205
+ +L +L+ ER Y
Sbjct: 128 Q-------IADPRAKLESLFNERDPFY 147
>gi|332139922|ref|YP_004425660.1| shikimate kinase I [Alteromonas macleodii str. 'Deep ecotype']
gi|410860111|ref|YP_006975345.1| shikimate kinase I [Alteromonas macleodii AltDE1]
gi|238693278|sp|B4S0F6.1|AROK_ALTMD RecName: Full=Shikimate kinase; Short=SK
gi|327549944|gb|AEA96662.1| shikimate kinase I [Alteromonas macleodii str. 'Deep ecotype']
gi|410817373|gb|AFV83990.1| shikimate kinase I [Alteromonas macleodii AltDE1]
Length = 171
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 9/170 (5%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L FFD D IE+ G +A IF L GE FR +E
Sbjct: 5 RNIFLVGPMGAGKSTIGRHLADELHLDFFDSDQEIERRT-GADIAWIFDLEGEDGFRARE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS-R 175
V+ L+ + +V++TGGG+ VT+ + R +GI V+L ++ +++A D R
Sbjct: 64 ENVINDLTDKQGIVLATGGGSIVTKAVRNRLSARGIVVYLQTTID---KQVARTQRDKRR 120
Query: 176 PLLHQCESGDAYTEALNRLSTLWEERGEAYANAN---ARVSLENIAVKLG 222
PLL + + + L+EE + + + AR I K+G
Sbjct: 121 PLLQNEDPEQVLRDLAEMRNPLYEEVADYIVDTDDQSARAVANQIISKIG 170
>gi|440232893|ref|YP_007346686.1| shikimate kinase [Serratia marcescens FGI94]
gi|440054598|gb|AGB84501.1| shikimate kinase [Serratia marcescens FGI94]
Length = 173
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 86/146 (58%), Gaps = 7/146 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L FFD D IE+ G V +F + GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMEFFDSDQEIERRT-GADVGWVFDVEGEEGFRDRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SR 175
+V+ +L+ + +V++TGGG+V +R R +G+ V+L+ +E +++A D R
Sbjct: 64 EKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKR 120
Query: 176 PLLHQCESGDAYTEALNR-LSTLWEE 200
PLL E EAL + + L+EE
Sbjct: 121 PLLQVDEPPREVLEALAKERNPLYEE 146
>gi|357012346|ref|ZP_09077345.1| shikimate kinase [Paenibacillus elgii B69]
Length = 171
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I LVGMMG+GK++VG+ L+ L + + D D IE++ G S+ +F GE FFR+ E
Sbjct: 4 RNIVLVGMMGTGKSSVGQALASRLNWVYEDTDAAIERT-QGMSITRMFAELGEPFFRKAE 62
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRP 176
+E +++ R VV+TGGGAV N MQ G+ V L E + +R+ + SRP
Sbjct: 63 SETIERTLQGRHQVVATGGGAVLAEHNRILMQSSGLVVALKASAETIIERVRS--DQSRP 120
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 219
LL +R+ + E R AY A+ V + V
Sbjct: 121 LLQGG--------VEDRVRHIMESRKHAYDFADLHVDTDGKTV 155
>gi|376242934|ref|YP_005133786.1| shikimate kinase [Corynebacterium diphtheriae CDCE 8392]
gi|372106176|gb|AEX72238.1| shikimate kinase [Corynebacterium diphtheriae CDCE 8392]
Length = 182
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 49 QEIEPYLSGRC---IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIF 105
Q +E +SGR + LVG G+GKTT+G+ L+ L S D D LIEQ + G +F
Sbjct: 4 QLLESDVSGRVRPIVVLVGPPGAGKTTIGRRLANALNTSVVDSDVLIEQ-LQGKPCGVVF 62
Query: 106 KLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQ 165
GE FR+ E EV+ +L VVS GGGAVT + ++ I VW+DV +
Sbjct: 63 AELGEPNFRDLEAEVID-FALTTAGVVSLGGGAVTTESVRQKLRAQIVVWVDVSAAEGVR 121
Query: 166 RIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLG 222
R A +SRPLL + Y+E L + ++E + A+ + R + +A LG
Sbjct: 122 RTAV--ENSRPLLDTTNPLERYSELLAQRRDFYKEVADYRAHTDGRSPQQIVADILG 176
>gi|304311963|ref|YP_003811561.1| shikimate kinase [gamma proteobacterium HdN1]
gi|301797696|emb|CBL45918.1| Shikimate kinase I protein [gamma proteobacterium HdN1]
Length = 175
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 79/143 (55%), Gaps = 6/143 (4%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ L+G MG+GK+T+G+ L+ +L Y F D D IE G + IF + GE FR++E
Sbjct: 7 VILIGPMGAGKSTIGRQLAALLRYEFVDSDHEIEART-GADIPWIFDVEGEEGFRKREEA 65
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTD-SRPL 177
V+ L+ + +V++TGGGA+ R N R M +G+ V+L +E Q++A D +RPL
Sbjct: 66 VIDDLTQRQHIVLATGGGAILREANRRAMSARGVVVYLKTSIE---QQLARTARDRNRPL 122
Query: 178 LHQCESGDAYTEALNRLSTLWEE 200
L TE + L+ E
Sbjct: 123 LQTENPRKVLTELMAIRDPLYSE 145
>gi|289670641|ref|ZP_06491716.1| shikimate kinase [Xanthomonas campestris pv. musacearum NCPPB 4381]
Length = 180
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ +VG MG+GK+ +G+ L+ G F D D I + V G+S+ EIF+ +GE FR+ E +
Sbjct: 7 LVMVGPMGAGKSCIGRRLAERFGLEFVDVDQSIVEQV-GSSIPEIFEQHGEARFRQHEAD 65
Query: 120 VLQKLSLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
LQ L ++STGGGAV P R +G V+L V + A R+A +RPLL
Sbjct: 66 TLQALLEQDNKLISTGGGAVLDPNTRQRICARGFVVYLHVSVPAQLTRLAR--DRNRPLL 123
Query: 179 HQCESGDAYTEALNRLSTLWEE 200
+ + A R + L++E
Sbjct: 124 QRADREQALHAMAARRTPLYQE 145
>gi|229815247|ref|ZP_04445582.1| hypothetical protein COLINT_02292 [Collinsella intestinalis DSM
13280]
gi|229809027|gb|EEP44794.1| hypothetical protein COLINT_02292 [Collinsella intestinalis DSM
13280]
Length = 501
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I L+GM G GKT VG+ L+ +LG D D ++E + T AE +GE FRE+ETE
Sbjct: 344 IVLIGMPGCGKTRVGERLAALLGREHIDIDHVLEDELQSTC-AEYICQHGEAAFRERETE 402
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQR 166
L+ + LV+S GGG VTR NW + Q GI V LD P++ L+++
Sbjct: 403 ALRGTAARSGLVISCGGGVVTRAENWPLIHQNGIIVMLDRPIDELSKK 450
>gi|421890498|ref|ZP_16321356.1| Shikimate kinase (SK) [Ralstonia solanacearum K60-1]
gi|378964108|emb|CCF98104.1| Shikimate kinase (SK) [Ralstonia solanacearum K60-1]
Length = 214
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
LS ++ VG+MG+GKTTVG+ ++ L FFD D IE G V IF+ GE FR
Sbjct: 25 LSVSNVFFVGLMGAGKTTVGRAVARRLDLPFFDSDHEIEARC-GVRVPVIFEHEGEMGFR 83
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD 173
++ET+V+ +L+ +V++TGGGAV RP N ++ ++G ++L L R
Sbjct: 84 DRETQVIDELTARHGVVLATGGGAVLRPENRAFLRERGTVIYLRANPHDLYLRTRH--DK 141
Query: 174 SRPLLHQCESGDAYTEALN 192
+RPLL Q E+ A E L+
Sbjct: 142 NRPLL-QTENPRAKLEELH 159
>gi|170288385|ref|YP_001738623.1| bifunctional shikimate kinase/3-dehydroquinate synthase [Thermotoga
sp. RQ2]
gi|170175888|gb|ACB08940.1| Shikimate kinase., 3-dehydroquinate synthase [Thermotoga sp. RQ2]
Length = 492
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 86/147 (58%), Gaps = 13/147 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I+LVGMMGSGK+T+GK +S VL F D D IE+ +G SV IF+ GE +FR KE E
Sbjct: 3 IFLVGMMGSGKSTIGKRVSEVLDLQFIDMDEEIERR-EGRSVRRIFEEDGEEYFRLKEKE 61
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
+L++L +VV+TGGG V P N ++K +++L P E L +R+ T++RPLL
Sbjct: 62 LLRELVERDNVVVATGGGVVIDPENRELLKKEKTLFLYAPPEVLMERVT---TENRPLLR 118
Query: 180 QCESGDAYTEALNRLSTLWEERGEAYA 206
E R+ +WE R + Y
Sbjct: 119 ---------EGKERIREIWERRKQFYT 136
>gi|316931926|ref|YP_004106908.1| shikimate kinase [Rhodopseudomonas palustris DX-1]
gi|315599640|gb|ADU42175.1| Shikimate kinase [Rhodopseudomonas palustris DX-1]
Length = 205
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 76/147 (51%), Gaps = 4/147 (2%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L R + L+GMMG+GK+TVG+ L+ LG F D DT IE + ++ EIF+ +GE FR
Sbjct: 23 LGDRPVVLIGMMGAGKSTVGRRLALRLGLPFLDADTEIETAA-AMTIPEIFQTHGEPHFR 81
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTD 173
+ E V+ +L V++TGGGA R R K IS+WL+ + + +R+
Sbjct: 82 DGEARVIARLLDGGTKVLATGGGAFMREETRDRIRDKAISLWLEAEADVILRRVKRRA-- 139
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEE 200
RPLL + + L+ E
Sbjct: 140 DRPLLKPPDPAGTIARLIAERYPLYRE 166
>gi|88811951|ref|ZP_01127204.1| shikimate kinase I [Nitrococcus mobilis Nb-231]
gi|88790835|gb|EAR21949.1| shikimate kinase I [Nitrococcus mobilis Nb-231]
Length = 174
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 18/171 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
++L+G MG+GK+ VG++L+ LG F D D ++E+ G +A IF + GE FR +E
Sbjct: 7 VFLIGPMGAGKSAVGQVLAQRLGRRFLDSDRVLEERT-GVDIARIFDVEGEVGFRAREEI 65
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
VLQ L+ +V++TGGGAV R N Y+ ++G++V+L ++ ++ +RPLL
Sbjct: 66 VLQDLTRHDGVVLATGGGAVLRERNRVYLRERGLTVYLRTSIDT---QLIRTRHSNRPLL 122
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 229
Q E A RL + ER Y +L +I V H ++++
Sbjct: 123 -QTEDPRA------RLQEVMLERAPLYE------TLADITVDTDHGTIAAI 160
>gi|398384577|ref|ZP_10542607.1| shikimate kinase [Sphingobium sp. AP49]
gi|397722736|gb|EJK83272.1| shikimate kinase [Sphingobium sp. AP49]
Length = 182
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 10/134 (7%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I LVGMMG GK+TVG+ L+ LG F D D IE++ G +++E+F YGE FR+ E
Sbjct: 17 IVLVGMMGVGKSTVGRRLAARLGLHFVDADEEIERAA-GMTISEMFARYGEAHFRDGERR 75
Query: 120 VLQKLSLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSR 175
V+ +L V++TGGGA TR + + + ++WLD ++ L R++ + R
Sbjct: 76 VIARLMDGAPKVIATGGGAFMQDDTRAL---ILNQATAIWLDADIDILVDRVSR--REGR 130
Query: 176 PLLHQCESGDAYTE 189
PLL + TE
Sbjct: 131 PLLKDRDPRVVLTE 144
>gi|27375299|ref|NP_766828.1| shikimate kinase [Bradyrhizobium japonicum USDA 110]
gi|27348435|dbj|BAC45453.1| bll0188 [Bradyrhizobium japonicum USDA 110]
Length = 244
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 37 PIDEAQVLKNKSQE--IEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQ 94
P+ +A + S E I L R I LVGMMG GK+T+G+ ++ L F D DT IE
Sbjct: 37 PMSDAALPIQASPEADILSALGARSIVLVGMMGVGKSTIGRRMAARLKLPFVDADTEIEA 96
Query: 95 SVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTR-PINWRYMQKGIS 153
+ G ++ EIF+ +GEG FR+ E V+ +L +V++TGGGA R R K +S
Sbjct: 97 AA-GMTIPEIFERHGEGHFRDGEARVIARLLDGGPVVLATGGGAFMREETRARIAAKAVS 155
Query: 154 VWL 156
+WL
Sbjct: 156 IWL 158
>gi|307942510|ref|ZP_07657858.1| shikimate kinase [Roseibium sp. TrichSKD4]
gi|307774149|gb|EFO33362.1| shikimate kinase [Roseibium sp. TrichSKD4]
Length = 204
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L + I LVG+MG GK+TVG+ L+ L +F D DT IE++ + T V+EIF +GE +FR
Sbjct: 27 LGNKTIVLVGIMGCGKSTVGRRLAQRLDLNFLDADTEIERAANMT-VSEIFAEHGEPYFR 85
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD 173
E V+ +L V++TGGGAV + + + GIS+WL + R+ T
Sbjct: 86 SGEERVIARLLQEGPQVLATGGGAVMSEATRKEIAENGISIWLKAEFNTVMARVRRRST- 144
Query: 174 SRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 208
RPLL + + L E+R YA A
Sbjct: 145 -RPLLQNPDPEGT-------MRALMEKRHPVYALA 171
>gi|300858561|ref|YP_003783544.1| shikimate kinase [Corynebacterium pseudotuberculosis FRC41]
gi|375288738|ref|YP_005123279.1| shikimate kinase [Corynebacterium pseudotuberculosis 3/99-5]
gi|383314323|ref|YP_005375178.1| shikimate kinase [Corynebacterium pseudotuberculosis P54B96]
gi|384504745|ref|YP_005681415.1| shikimate kinase [Corynebacterium pseudotuberculosis 1002]
gi|384506838|ref|YP_005683507.1| shikimate kinase [Corynebacterium pseudotuberculosis C231]
gi|384508925|ref|YP_005685593.1| shikimate kinase [Corynebacterium pseudotuberculosis I19]
gi|384511017|ref|YP_005690595.1| shikimate kinase [Corynebacterium pseudotuberculosis PAT10]
gi|385807620|ref|YP_005844017.1| shikimate kinase [Corynebacterium pseudotuberculosis 267]
gi|387136670|ref|YP_005692650.1| shikimate kinase [Corynebacterium pseudotuberculosis 42/02-A]
gi|300686015|gb|ADK28937.1| Shikimate kinase [Corynebacterium pseudotuberculosis FRC41]
gi|302206273|gb|ADL10615.1| Shikimate kinase [Corynebacterium pseudotuberculosis C231]
gi|302330831|gb|ADL21025.1| Shikimate kinase [Corynebacterium pseudotuberculosis 1002]
gi|308276515|gb|ADO26414.1| Shikimate kinase [Corynebacterium pseudotuberculosis I19]
gi|341824956|gb|AEK92477.1| Shikimate kinase [Corynebacterium pseudotuberculosis PAT10]
gi|348607115|gb|AEP70388.1| Shikimate kinase [Corynebacterium pseudotuberculosis 42/02-A]
gi|371576027|gb|AEX39630.1| Shikimate kinase [Corynebacterium pseudotuberculosis 3/99-5]
gi|380869824|gb|AFF22298.1| Shikimate kinase [Corynebacterium pseudotuberculosis P54B96]
gi|383805013|gb|AFH52092.1| Shikimate kinase [Corynebacterium pseudotuberculosis 267]
Length = 198
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 77/152 (50%), Gaps = 4/152 (2%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ LVG G+GKTTVGK L+ L +F D D LIEQS G S +F GE FR+ E
Sbjct: 32 VVLVGPPGAGKTTVGKRLANALHTNFVDTDALIEQST-GQSCGAVFSKIGEPEFRKLEES 90
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 179
+++ +L VVS GGGAV P+ + +W+DV E AQR A +SRP+L
Sbjct: 91 KVRE-ALGTSGVVSLGGGAVLSPLTRNLLLGHTVIWIDVDPEEGAQRTGA--DNSRPILQ 147
Query: 180 QCESGDAYTEALNRLSTLWEERGEAYANANAR 211
+ Y E + L+ E +N R
Sbjct: 148 AQDPIAHYRELVETRRPLYREVSRHRSNTTGR 179
>gi|34541244|ref|NP_905723.1| shikimate kinase [Porphyromonas gingivalis W83]
gi|188994384|ref|YP_001928636.1| shikimate kinase [Porphyromonas gingivalis ATCC 33277]
gi|334146512|ref|YP_004509439.1| shikimate kinase [Porphyromonas gingivalis TDC60]
gi|34397560|gb|AAQ66622.1| shikimate kinase [Porphyromonas gingivalis W83]
gi|188594064|dbj|BAG33039.1| probable shikimate kinase [Porphyromonas gingivalis ATCC 33277]
gi|333803666|dbj|BAK24873.1| shikimate kinase [Porphyromonas gingivalis TDC60]
Length = 186
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 90/162 (55%), Gaps = 13/162 (8%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
I++VG MGSGK+TVG+ ++ VLG+ F D D IE VA+IF+ GE FR +E
Sbjct: 5 IFIVGYMGSGKSTVGRKMADVLGWRFIDTDFFIENRFR-KRVADIFRDEGEAVFRRRERV 63
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 178
V+++LS M +++TGGG N M + G++++L+V E LA R+ + +RP +
Sbjct: 64 VIEELSGMEDAIIATGGGLPCHSDNMTLMNEAGLTLYLEVSDEVLAVRL-ELCKRTRPKV 122
Query: 179 HQCESGDAYTEALNRLSTLWEE---RGEAYANANARVSLENI 217
D E L LS + EE RG+ Y A V+ + +
Sbjct: 123 K-----DKTGEEL--LSHIREEMAFRGDIYRRAKVIVNSDKL 157
>gi|358010319|ref|ZP_09142129.1| shikimate kinase [Acinetobacter sp. P8-3-8]
Length = 163
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
Query: 66 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 125
MG+GKTTVG+ L+ +LG F D D IE+ G S+ IF+ GE FR +ET V+ L+
Sbjct: 1 MGAGKTTVGRHLAELLGREFLDSDHEIERKT-GASIPWIFEKEGEQGFRTRETIVIDDLT 59
Query: 126 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 178
+ LVV+TGGGAVT+ +N Y++ +GI ++L P+E Q + +RPLL
Sbjct: 60 SKKNLVVATGGGAVTQVMNREYLKHRGIVIYLYTPVE--IQLLRTHRDKNRPLL 111
>gi|225866217|ref|YP_002751595.1| shikimate kinase [Bacillus cereus 03BB102]
gi|254806766|sp|C1ERV8.1|AROK_BACC3 RecName: Full=Shikimate kinase; Short=SK
gi|225788330|gb|ACO28547.1| shikimate kinase [Bacillus cereus 03BB102]
Length = 165
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 13/164 (7%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ IY+ G MG+GKTT+GK LS L D D IE+ + ++ +IF GE FRE E
Sbjct: 2 KSIYITGYMGAGKTTIGKALSKELHMDVVDTDQKIEEKQE-KAILDIFAEEGEMAFREYE 60
Query: 118 TEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRP 176
+E+L+ L + R +++TGGG + R N ++M++ GI V+L +A+R+ T RP
Sbjct: 61 SEMLRSLPV-RNAIITTGGGIIEREENRKWMKENGIVVYLYCDPHVIAERLREDTT--RP 117
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 220
L Q + DA+ T +E R Y A+ + N +VK
Sbjct: 118 LF-QKKDIDAFV-------TKFESRQAYYEEAHIHIDTTNKSVK 153
>gi|168335154|ref|ZP_02693261.1| shikimate 5-dehydrogenase [Epulopiscium sp. 'N.t. morphotype B']
Length = 532
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 14/151 (9%)
Query: 55 LSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR 114
L IYL+G MG+GK+TVGK+L+ L F D D IE + + ++ EIF YGE +FR
Sbjct: 368 LKQESIYLIGFMGAGKSTVGKLLAKTLNIPFVDIDNYIEDT-EKVAIKEIFANYGEDYFR 426
Query: 115 EKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 174
E E + L + + + V +TGGG +T + Y+ K ++L ++ L +RI +
Sbjct: 427 ELEFKALSQCDDLPK-VYATGGGILTNTSSREYLSKKRCIYLKNDIDTLYERIK--DDAN 483
Query: 175 RPLLHQCESGDAYTEALNRLSTLWEERGEAY 205
RPL+ ES L+ +R EAY
Sbjct: 484 RPLVDTKES----------LAQRLADRKEAY 504
>gi|22127803|ref|NP_671226.1| shikimate kinase I [Yersinia pestis KIM10+]
gi|45440015|ref|NP_991554.1| shikimate kinase I [Yersinia pestis biovar Microtus str. 91001]
gi|51598040|ref|YP_072231.1| shikimate kinase I [Yersinia pseudotuberculosis IP 32953]
gi|108809309|ref|YP_653225.1| shikimate kinase I [Yersinia pestis Antiqua]
gi|108814074|ref|YP_649841.1| shikimate kinase I [Yersinia pestis Nepal516]
gi|145597401|ref|YP_001161476.1| shikimate kinase I [Yersinia pestis Pestoides F]
gi|150260833|ref|ZP_01917561.1| shikimate kinase I [Yersinia pestis CA88-4125]
gi|153949876|ref|YP_001402914.1| shikimate kinase I [Yersinia pseudotuberculosis IP 31758]
gi|162420465|ref|YP_001608043.1| shikimate kinase I [Yersinia pestis Angola]
gi|165928015|ref|ZP_02223847.1| shikimate kinase [Yersinia pestis biovar Orientalis str. F1991016]
gi|165936147|ref|ZP_02224716.1| shikimate kinase [Yersinia pestis biovar Orientalis str. IP275]
gi|166010598|ref|ZP_02231496.1| shikimate kinase [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213315|ref|ZP_02239350.1| shikimate kinase [Yersinia pestis biovar Antiqua str. B42003004]
gi|167398965|ref|ZP_02304489.1| shikimate kinase [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167419300|ref|ZP_02311053.1| shikimate kinase [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167425657|ref|ZP_02317410.1| shikimate kinase [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|170022486|ref|YP_001718991.1| shikimate kinase I [Yersinia pseudotuberculosis YPIII]
gi|186897239|ref|YP_001874351.1| shikimate kinase I [Yersinia pseudotuberculosis PB1/+]
gi|218927362|ref|YP_002345237.1| shikimate kinase I [Yersinia pestis CO92]
gi|229836368|ref|ZP_04456535.1| shikimate kinase I [Yersinia pestis Pestoides A]
gi|229840007|ref|ZP_04460166.1| shikimate kinase I [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229842088|ref|ZP_04462243.1| shikimate kinase I [Yersinia pestis biovar Orientalis str. India
195]
gi|229904611|ref|ZP_04519722.1| shikimate kinase I [Yersinia pestis Nepal516]
gi|270488175|ref|ZP_06205249.1| shikimate kinase [Yersinia pestis KIM D27]
gi|294502240|ref|YP_003566302.1| shikimate kinase I [Yersinia pestis Z176003]
gi|384120724|ref|YP_005503344.1| shikimate kinase I [Yersinia pestis D106004]
gi|384124607|ref|YP_005507221.1| shikimate kinase I [Yersinia pestis D182038]
gi|384137869|ref|YP_005520571.1| shikimate kinase I [Yersinia pestis A1122]
gi|384412781|ref|YP_005622143.1| shikimate kinase I [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|420544583|ref|ZP_15042795.1| shikimate kinase 1 [Yersinia pestis PY-01]
gi|420549872|ref|ZP_15047524.1| shikimate kinase 1 [Yersinia pestis PY-02]
gi|420555326|ref|ZP_15052377.1| shikimate kinase 1 [Yersinia pestis PY-03]
gi|420560977|ref|ZP_15057292.1| shikimate kinase 1 [Yersinia pestis PY-04]
gi|420566008|ref|ZP_15061829.1| shikimate kinase 1 [Yersinia pestis PY-05]
gi|420571623|ref|ZP_15066928.1| shikimate kinase 1 [Yersinia pestis PY-06]
gi|420576998|ref|ZP_15071789.1| shikimate kinase 1 [Yersinia pestis PY-07]
gi|420582331|ref|ZP_15076646.1| shikimate kinase 1 [Yersinia pestis PY-08]
gi|420587463|ref|ZP_15081285.1| shikimate kinase 1 [Yersinia pestis PY-09]
gi|420592767|ref|ZP_15086057.1| shikimate kinase 1 [Yersinia pestis PY-10]
gi|420598449|ref|ZP_15091151.1| shikimate kinase 1 [Yersinia pestis PY-11]
gi|420604001|ref|ZP_15096092.1| shikimate kinase 1 [Yersinia pestis PY-12]
gi|420609341|ref|ZP_15100947.1| shikimate kinase 1 [Yersinia pestis PY-13]
gi|420614586|ref|ZP_15105623.1| ATPase associated with various cellular activities family protein
[Yersinia pestis PY-14]
gi|420620034|ref|ZP_15110370.1| shikimate kinase 1 [Yersinia pestis PY-15]
gi|420625115|ref|ZP_15114973.1| shikimate kinase 1 [Yersinia pestis PY-16]
gi|420630243|ref|ZP_15119631.1| shikimate kinase 1 [Yersinia pestis PY-19]
gi|420635374|ref|ZP_15124218.1| shikimate kinase 1 [Yersinia pestis PY-25]
gi|420641002|ref|ZP_15129290.1| shikimate kinase 1 [Yersinia pestis PY-29]
gi|420646128|ref|ZP_15133996.1| shikimate kinase 1 [Yersinia pestis PY-32]
gi|420651793|ref|ZP_15139069.1| shikimate kinase 1 [Yersinia pestis PY-34]
gi|420657197|ref|ZP_15143949.1| shikimate kinase 1 [Yersinia pestis PY-36]
gi|420662568|ref|ZP_15148742.1| shikimate kinase 1 [Yersinia pestis PY-42]
gi|420667555|ref|ZP_15153246.1| ATPase associated with various cellular activities family protein
[Yersinia pestis PY-45]
gi|420672866|ref|ZP_15158076.1| shikimate kinase 1 [Yersinia pestis PY-46]
gi|420678365|ref|ZP_15163082.1| shikimate kinase 1 [Yersinia pestis PY-47]
gi|420683593|ref|ZP_15167782.1| shikimate kinase 1 [Yersinia pestis PY-48]
gi|420688768|ref|ZP_15172384.1| shikimate kinase 1 [Yersinia pestis PY-52]
gi|420694576|ref|ZP_15177469.1| shikimate kinase 1 [Yersinia pestis PY-53]
gi|420699803|ref|ZP_15182050.1| ATPase associated with various cellular activities family protein
[Yersinia pestis PY-54]
gi|420706004|ref|ZP_15186944.1| shikimate kinase 1 [Yersinia pestis PY-55]
gi|420711268|ref|ZP_15191726.1| shikimate kinase 1 [Yersinia pestis PY-56]
gi|420716631|ref|ZP_15196485.1| shikimate kinase 1 [Yersinia pestis PY-58]
gi|420727910|ref|ZP_15206288.1| shikimate kinase 1 [Yersinia pestis PY-60]
gi|420733031|ref|ZP_15210900.1| shikimate kinase 1 [Yersinia pestis PY-61]
gi|420738499|ref|ZP_15215841.1| shikimate kinase 1 [Yersinia pestis PY-63]
gi|420743735|ref|ZP_15220535.1| shikimate kinase 1 [Yersinia pestis PY-64]
gi|420749621|ref|ZP_15225468.1| shikimate kinase 1 [Yersinia pestis PY-65]
gi|420754654|ref|ZP_15229996.1| shikimate kinase 1 [Yersinia pestis PY-66]
gi|420765949|ref|ZP_15239527.1| shikimate kinase 1 [Yersinia pestis PY-72]
gi|420770985|ref|ZP_15244031.1| shikimate kinase 1 [Yersinia pestis PY-76]
gi|420776328|ref|ZP_15248857.1| shikimate kinase 1 [Yersinia pestis PY-88]
gi|420781786|ref|ZP_15253648.1| shikimate kinase 1 [Yersinia pestis PY-89]
gi|420787244|ref|ZP_15258425.1| ATPase associated with various cellular activities family protein
[Yersinia pestis PY-90]
gi|420792694|ref|ZP_15263337.1| shikimate kinase 1 [Yersinia pestis PY-91]
gi|420803216|ref|ZP_15272796.1| shikimate kinase 1 [Yersinia pestis PY-93]
gi|420808403|ref|ZP_15277497.1| ATPase associated with various cellular activities family protein
[Yersinia pestis PY-94]
gi|420814196|ref|ZP_15282673.1| shikimate kinase 1 [Yersinia pestis PY-95]
gi|420819315|ref|ZP_15287325.1| shikimate kinase 1 [Yersinia pestis PY-96]
gi|420824412|ref|ZP_15291875.1| shikimate kinase 1 [Yersinia pestis PY-98]
gi|420830233|ref|ZP_15297136.1| shikimate kinase 1 [Yersinia pestis PY-99]
gi|420835041|ref|ZP_15301468.1| shikimate kinase 1 [Yersinia pestis PY-100]
gi|420840168|ref|ZP_15306113.1| shikimate kinase 1 [Yersinia pestis PY-101]
gi|420845782|ref|ZP_15311197.1| shikimate kinase 1 [Yersinia pestis PY-102]
gi|420851102|ref|ZP_15315956.1| shikimate kinase 1 [Yersinia pestis PY-103]
gi|420856709|ref|ZP_15320668.1| shikimate kinase 1 [Yersinia pestis PY-113]
gi|421761576|ref|ZP_16198376.1| shikimate kinase I [Yersinia pestis INS]
gi|30172912|sp|Q8ZJF7.1|AROK_YERPE RecName: Full=Shikimate kinase 1; Short=SK 1
gi|81638212|sp|Q664L9.1|AROK_YERPS RecName: Full=Shikimate kinase 1; Short=SK 1
gi|123072584|sp|Q1C2P2.1|AROK_YERPA RecName: Full=Shikimate kinase 1; Short=SK 1
gi|123372810|sp|Q1CCN9.1|AROK_YERPN RecName: Full=Shikimate kinase 1; Short=SK 1
gi|166219879|sp|A4TGU1.1|AROK_YERPP RecName: Full=Shikimate kinase 1; Short=SK 1
gi|166988284|sp|A7FNT6.1|AROK_YERP3 RecName: Full=Shikimate kinase 1; Short=SK 1
gi|238687300|sp|A9R4B0.1|AROK_YERPG RecName: Full=Shikimate kinase 1; Short=SK 1
gi|238688415|sp|B1JIQ3.1|AROK_YERPY RecName: Full=Shikimate kinase 1; Short=SK 1
gi|238691402|sp|B2K5T5.1|AROK_YERPB RecName: Full=Shikimate kinase 1; Short=SK 1
gi|21960934|gb|AAM87477.1|AE013998_1 shikimate kinase I [Yersinia pestis KIM10+]
gi|45434870|gb|AAS60431.1| shikimate kinase I [Yersinia pestis biovar Microtus str. 91001]
gi|51591322|emb|CAH22988.1| shikimate kinase I [Yersinia pseudotuberculosis IP 32953]
gi|108777722|gb|ABG20241.1| shikimate kinase [Yersinia pestis Nepal516]
gi|108781222|gb|ABG15280.1| shikimate kinase [Yersinia pestis Antiqua]
gi|115345973|emb|CAL18837.1| shikimate kinase I [Yersinia pestis CO92]
gi|145209097|gb|ABP38504.1| shikimate kinase [Yersinia pestis Pestoides F]
gi|149290241|gb|EDM40318.1| shikimate kinase I [Yersinia pestis CA88-4125]
gi|152961371|gb|ABS48832.1| shikimate kinase [Yersinia pseudotuberculosis IP 31758]
gi|162353280|gb|ABX87228.1| shikimate kinase [Yersinia pestis Angola]
gi|165915761|gb|EDR34369.1| shikimate kinase [Yersinia pestis biovar Orientalis str. IP275]
gi|165919964|gb|EDR37265.1| shikimate kinase [Yersinia pestis biovar Orientalis str. F1991016]
gi|165990688|gb|EDR42989.1| shikimate kinase [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205613|gb|EDR50093.1| shikimate kinase [Yersinia pestis biovar Antiqua str. B42003004]
gi|166963294|gb|EDR59315.1| shikimate kinase [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167051469|gb|EDR62877.1| shikimate kinase [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167055347|gb|EDR65141.1| shikimate kinase [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169749020|gb|ACA66538.1| Shikimate kinase [Yersinia pseudotuberculosis YPIII]
gi|186700265|gb|ACC90894.1| shikimate kinase [Yersinia pseudotuberculosis PB1/+]
gi|229678729|gb|EEO74834.1| shikimate kinase I [Yersinia pestis Nepal516]
gi|229690398|gb|EEO82452.1| shikimate kinase I [Yersinia pestis biovar Orientalis str. India
195]
gi|229696373|gb|EEO86420.1| shikimate kinase I [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229706436|gb|EEO92443.1| shikimate kinase I [Yersinia pestis Pestoides A]
gi|262360320|gb|ACY57041.1| shikimate kinase I [Yersinia pestis D106004]
gi|262364271|gb|ACY60828.1| shikimate kinase I [Yersinia pestis D182038]
gi|270336679|gb|EFA47456.1| shikimate kinase [Yersinia pestis KIM D27]
gi|294352699|gb|ADE63040.1| shikimate kinase I [Yersinia pestis Z176003]
gi|320013285|gb|ADV96856.1| shikimate kinase I [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|342852998|gb|AEL71551.1| shikimate kinase I [Yersinia pestis A1122]
gi|391433354|gb|EIQ94696.1| shikimate kinase 1 [Yersinia pestis PY-01]
gi|391434168|gb|EIQ95394.1| shikimate kinase 1 [Yersinia pestis PY-02]
gi|391437025|gb|EIQ97928.1| shikimate kinase 1 [Yersinia pestis PY-03]
gi|391449315|gb|EIR09050.1| shikimate kinase 1 [Yersinia pestis PY-04]
gi|391449924|gb|EIR09606.1| shikimate kinase 1 [Yersinia pestis PY-05]
gi|391452003|gb|EIR11455.1| shikimate kinase 1 [Yersinia pestis PY-06]
gi|391465264|gb|EIR23474.1| shikimate kinase 1 [Yersinia pestis PY-07]
gi|391466788|gb|EIR24828.1| shikimate kinase 1 [Yersinia pestis PY-08]
gi|391468931|gb|EIR26762.1| shikimate kinase 1 [Yersinia pestis PY-09]
gi|391482764|gb|EIR39185.1| shikimate kinase 1 [Yersinia pestis PY-10]
gi|391483221|gb|EIR39603.1| shikimate kinase 1 [Yersinia pestis PY-12]
gi|391483755|gb|EIR40091.1| shikimate kinase 1 [Yersinia pestis PY-11]
gi|391497615|gb|EIR52458.1| shikimate kinase 1 [Yersinia pestis PY-13]
gi|391498439|gb|EIR53209.1| shikimate kinase 1 [Yersinia pestis PY-15]
gi|391501980|gb|EIR56334.1| ATPase associated with various cellular activities family protein
[Yersinia pestis PY-14]
gi|391513044|gb|EIR66305.1| shikimate kinase 1 [Yersinia pestis PY-16]
gi|391514681|gb|EIR67764.1| shikimate kinase 1 [Yersinia pestis PY-19]
gi|391516271|gb|EIR69183.1| shikimate kinase 1 [Yersinia pestis PY-25]
gi|391528764|gb|EIR80555.1| shikimate kinase 1 [Yersinia pestis PY-29]
gi|391531641|gb|EIR83120.1| shikimate kinase 1 [Yersinia pestis PY-34]
gi|391532862|gb|EIR84205.1| shikimate kinase 1 [Yersinia pestis PY-32]
gi|391545817|gb|EIR95863.1| shikimate kinase 1 [Yersinia pestis PY-36]
gi|391547594|gb|EIR97481.1| shikimate kinase 1 [Yersinia pestis PY-42]
gi|391548201|gb|EIR98025.1| ATPase associated with various cellular activities family protein
[Yersinia pestis PY-45]
gi|391561847|gb|EIS10336.1| shikimate kinase 1 [Yersinia pestis PY-46]
gi|391562935|gb|EIS11299.1| shikimate kinase 1 [Yersinia pestis PY-47]
gi|391565107|gb|EIS13254.1| shikimate kinase 1 [Yersinia pestis PY-48]
gi|391577239|gb|EIS23694.1| shikimate kinase 1 [Yersinia pestis PY-52]
gi|391578069|gb|EIS24394.1| shikimate kinase 1 [Yersinia pestis PY-53]
gi|391589179|gb|EIS34106.1| shikimate kinase 1 [Yersinia pestis PY-55]
gi|391592874|gb|EIS37248.1| ATPase associated with various cellular activities family protein
[Yersinia pestis PY-54]
gi|391593356|gb|EIS37673.1| shikimate kinase 1 [Yersinia pestis PY-56]
gi|391606161|gb|EIS48924.1| shikimate kinase 1 [Yersinia pestis PY-60]
gi|391608116|gb|EIS50641.1| shikimate kinase 1 [Yersinia pestis PY-58]
gi|391620787|gb|EIS61906.1| shikimate kinase 1 [Yersinia pestis PY-61]
gi|391621707|gb|EIS62722.1| shikimate kinase 1 [Yersinia pestis PY-63]
gi|391630115|gb|EIS69932.1| shikimate kinase 1 [Yersinia pestis PY-64]
gi|391632208|gb|EIS71762.1| shikimate kinase 1 [Yersinia pestis PY-65]
gi|391646238|gb|EIS84013.1| shikimate kinase 1 [Yersinia pestis PY-72]
gi|391649768|gb|EIS87123.1| shikimate kinase 1 [Yersinia pestis PY-66]
gi|391656135|gb|EIS92805.1| shikimate kinase 1 [Yersinia pestis PY-76]
gi|391663079|gb|EIS98957.1| shikimate kinase 1 [Yersinia pestis PY-88]
gi|391668169|gb|EIT03429.1| shikimate kinase 1 [Yersinia pestis PY-89]
gi|391669693|gb|EIT04806.1| ATPase associated with various cellular activities family protein
[Yersinia pestis PY-90]
gi|391673135|gb|EIT07886.1| shikimate kinase 1 [Yersinia pestis PY-91]
gi|391687226|gb|EIT20560.1| shikimate kinase 1 [Yersinia pestis PY-93]
gi|391690163|gb|EIT23220.1| ATPase associated with various cellular activities family protein
[Yersinia pestis PY-94]
gi|391701393|gb|EIT33403.1| shikimate kinase 1 [Yersinia pestis PY-95]
gi|391704535|gb|EIT36186.1| shikimate kinase 1 [Yersinia pestis PY-96]
gi|391705144|gb|EIT36738.1| shikimate kinase 1 [Yersinia pestis PY-98]
gi|391716095|gb|EIT46576.1| shikimate kinase 1 [Yersinia pestis PY-99]
gi|391720868|gb|EIT50861.1| shikimate kinase 1 [Yersinia pestis PY-100]
gi|391721317|gb|EIT51263.1| shikimate kinase 1 [Yersinia pestis PY-101]
gi|391731768|gb|EIT60425.1| shikimate kinase 1 [Yersinia pestis PY-102]
gi|391734541|gb|EIT62795.1| shikimate kinase 1 [Yersinia pestis PY-103]
gi|391737604|gb|EIT65477.1| shikimate kinase 1 [Yersinia pestis PY-113]
gi|411177898|gb|EKS47910.1| shikimate kinase I [Yersinia pestis INS]
Length = 173
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 86/146 (58%), Gaps = 7/146 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
R I+LVG MG+GK+T+G+ L+ L FFD D IE+ G V +F + GE FR++E
Sbjct: 5 RNIFLVGPMGAGKSTIGRQLAQQLNMEFFDSDQEIERRT-GADVGWVFDVEGEEGFRDRE 63
Query: 118 TEVLQKLSLMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SR 175
+V+ +L+ + +V++TGGG+V +R R +G+ V+L+ +E +++A D R
Sbjct: 64 EKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKR 120
Query: 176 PLLHQCESGDAYTEALNR-LSTLWEE 200
PLL E EAL + + L+EE
Sbjct: 121 PLLQVDEPPREVLEALAKERNPLYEE 146
>gi|262277620|ref|ZP_06055413.1| shikimate kinase [alpha proteobacterium HIMB114]
gi|262224723|gb|EEY75182.1| shikimate kinase [alpha proteobacterium HIMB114]
Length = 167
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 10/153 (6%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I LVGMMGSGKT++GK L+ L +F D D IE T + +IF+ GE +FR+ E
Sbjct: 3 KTIVLVGMMGSGKTSIGKELAKSLNINFIDSDKEIELKCKKT-IPKIFETKGETYFRKIE 61
Query: 118 TEVLQKLSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRP 176
++ KL V+S GGGA + I + + G+S+W+ LE + +R+ + RP
Sbjct: 62 EKICVKLIDGNPKVLSLGGGAFLNSAIRKKINKLGLSIWISPSLETIYERLGK-SKNKRP 120
Query: 177 LLHQCESGDAYTEALNRLSTLWEERGEAYANAN 209
LL+ Y + +++ R E Y AN
Sbjct: 121 LLN-------YKNLKRSIKVIYDSRKEQYNKAN 146
>gi|182419138|ref|ZP_02950392.1| shikimate kinase [Clostridium butyricum 5521]
gi|237669182|ref|ZP_04529164.1| shikimate kinase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182377093|gb|EDT74663.1| shikimate kinase [Clostridium butyricum 5521]
gi|237655069|gb|EEP52627.1| shikimate kinase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 171
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 15/148 (10%)
Query: 60 IYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETE 119
+ ++GM GSGKTT+GKIL L F+D D I++ S+ E+F+ GE +FR ET+
Sbjct: 5 VVIIGMPGSGKTTIGKILGRELDLKFYDMDEYIQERT-SKSILELFE-NGEDYFRNIETD 62
Query: 120 VLQKLSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 178
+ ++LS + +++STGGG V + N ++K + ++LD P+E + + V RPLL
Sbjct: 63 MCRELSKEKNVLISTGGGVVKKKENIDVLKKDALIIFLDRPVEKILE---DVDVSKRPLL 119
Query: 179 HQCESGDAYTEALNRLSTLWEERGEAYA 206
+ R+ L+ ER E Y
Sbjct: 120 KDGKE---------RVINLYNERYELYK 138
>gi|150025502|ref|YP_001296328.1| shikimate kinase [Flavobacterium psychrophilum JIP02/86]
gi|254806774|sp|A6GZJ6.1|AROK_FLAPJ RecName: Full=Shikimate kinase; Short=SK
gi|149772043|emb|CAL43519.1| Shikimate kinase [Flavobacterium psychrophilum JIP02/86]
Length = 172
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 73/124 (58%), Gaps = 5/124 (4%)
Query: 58 RCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKE 117
+ I LVG M SGKT +GK+LS + F D D LIE+S+ T V EIF+ GE FFR+KE
Sbjct: 2 KKIVLVGYMASGKTEIGKLLSKKVNLPFLDIDYLIEESLSKT-VNEIFEEKGEVFFRKKE 60
Query: 118 TEVLQ-KLSLMRQLVVSTGGGAVTRPINWRYMQKG--ISVWLDVPLEALAQRIAAVGTDS 174
EV + K++ + ++S GGG N ++QK IS++L + L R+ + D
Sbjct: 61 HEVFKNKINSKQSFILSLGGGTPCYAENHLFLQKDDVISIYLKGSVATLVDRL-KMNKDK 119
Query: 175 RPLL 178
RPLL
Sbjct: 120 RPLL 123
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,818,159,988
Number of Sequences: 23463169
Number of extensions: 152056481
Number of successful extensions: 780513
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2821
Number of HSP's successfully gapped in prelim test: 2208
Number of HSP's that attempted gapping in prelim test: 772326
Number of HSP's gapped (non-prelim): 5147
length of query: 257
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 118
effective length of database: 9,097,814,876
effective search space: 1073542155368
effective search space used: 1073542155368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)