Query 025118
Match_columns 257
No_of_seqs 190 out of 2544
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 02:51:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025118.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025118hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0034 Ca2+/calmodulin-depend 99.9 4.4E-26 9.6E-31 178.5 19.3 172 62-238 11-187 (187)
2 COG5126 FRQ1 Ca2+-binding prot 99.9 1.1E-25 2.4E-30 170.5 16.8 151 68-229 8-159 (160)
3 KOG0044 Ca2+ sensor (EF-Hand s 99.9 2.4E-24 5.3E-29 168.7 18.5 177 57-238 6-187 (193)
4 KOG0027 Calmodulin and related 99.9 5.2E-22 1.1E-26 152.7 16.9 143 74-226 2-149 (151)
5 PTZ00183 centrin; Provisional 99.9 2.3E-20 5E-25 144.4 17.5 148 72-229 9-157 (158)
6 KOG0038 Ca2+-binding kinase in 99.9 2.2E-20 4.8E-25 136.2 14.0 176 53-234 1-185 (189)
7 PTZ00184 calmodulin; Provision 99.8 1.6E-19 3.5E-24 138.1 17.7 144 73-226 4-148 (149)
8 KOG0028 Ca2+-binding protein ( 99.8 9.1E-20 2E-24 135.3 15.4 146 72-227 25-171 (172)
9 KOG0037 Ca2+-binding protein, 99.8 1.2E-17 2.6E-22 130.6 14.6 158 79-253 56-218 (221)
10 KOG0031 Myosin regulatory ligh 99.8 6.8E-17 1.5E-21 119.3 15.8 139 73-225 25-164 (171)
11 KOG0030 Myosin essential light 99.6 1.2E-14 2.5E-19 105.7 13.3 142 73-225 4-150 (152)
12 KOG0036 Predicted mitochondria 99.6 1.9E-14 4.1E-19 122.1 14.7 140 74-229 8-149 (463)
13 KOG0037 Ca2+-binding protein, 99.6 7.8E-14 1.7E-18 109.3 13.0 156 5-179 58-217 (221)
14 KOG4223 Reticulocalbin, calume 99.5 1.5E-13 3.3E-18 113.6 12.2 203 7-222 80-301 (325)
15 KOG0027 Calmodulin and related 99.5 2E-13 4.4E-18 104.9 10.9 133 5-180 9-147 (151)
16 PF13499 EF-hand_7: EF-hand do 99.5 3.6E-13 7.8E-18 88.6 7.8 66 155-224 1-66 (66)
17 PLN02964 phosphatidylserine de 99.4 2E-12 4.4E-17 118.6 14.4 119 57-182 118-243 (644)
18 PTZ00183 centrin; Provisional 99.4 1.3E-11 2.8E-16 95.3 14.5 123 53-181 27-153 (158)
19 COG5126 FRQ1 Ca2+-binding prot 99.4 2E-11 4.3E-16 93.0 14.5 121 54-181 31-155 (160)
20 KOG0044 Ca2+ sensor (EF-Hand s 99.3 3.1E-11 6.7E-16 95.0 12.9 124 56-181 40-174 (193)
21 PTZ00184 calmodulin; Provision 99.3 1.6E-10 3.4E-15 88.1 14.1 96 82-180 49-146 (149)
22 KOG2562 Protein phosphatase 2 99.2 1.3E-10 2.9E-15 100.3 12.6 188 5-223 226-421 (493)
23 cd05022 S-100A13 S-100A13: S-1 99.2 3.6E-11 7.9E-16 83.3 7.4 67 154-227 8-76 (89)
24 KOG0377 Protein serine/threoni 99.2 1.2E-10 2.7E-15 99.9 11.9 140 80-226 464-615 (631)
25 KOG2643 Ca2+ binding protein, 99.2 9E-11 2E-15 100.7 10.2 204 2-227 231-454 (489)
26 KOG4223 Reticulocalbin, calume 99.2 1.1E-10 2.4E-15 96.9 9.4 142 78-228 75-230 (325)
27 cd05027 S-100B S-100B: S-100B 99.1 3.3E-10 7.2E-15 78.6 8.1 69 154-226 8-79 (88)
28 KOG0028 Ca2+-binding protein ( 99.1 1.4E-09 3E-14 81.4 11.5 102 118-227 34-135 (172)
29 cd05026 S-100Z S-100Z: S-100Z 99.1 1.1E-09 2.4E-14 76.9 8.6 70 154-227 10-82 (93)
30 KOG0034 Ca2+/calmodulin-depend 99.1 3E-09 6.6E-14 83.7 11.9 119 56-181 47-174 (187)
31 cd05031 S-100A10_like S-100A10 99.0 1.4E-09 3E-14 76.6 8.7 75 154-232 8-85 (94)
32 cd05025 S-100A1 S-100A1: S-100 99.0 2.6E-09 5.6E-14 74.9 9.2 76 154-233 9-87 (92)
33 cd05029 S-100A6 S-100A6: S-100 99.0 3E-09 6.4E-14 73.8 7.9 69 154-227 10-80 (88)
34 PF13499 EF-hand_7: EF-hand do 99.0 1.4E-09 2.9E-14 71.4 5.9 60 120-179 3-65 (66)
35 PLN02964 phosphatidylserine de 98.9 1.1E-08 2.5E-13 94.2 12.6 119 97-227 119-244 (644)
36 cd05022 S-100A13 S-100A13: S-1 98.9 7E-09 1.5E-13 71.9 7.5 68 77-146 5-76 (89)
37 cd00213 S-100 S-100: S-100 dom 98.9 1.8E-08 3.8E-13 70.1 8.8 71 154-228 8-81 (88)
38 smart00027 EH Eps15 homology d 98.9 1.6E-08 3.5E-13 71.5 8.6 69 74-145 4-72 (96)
39 KOG4251 Calcium binding protei 98.9 2.3E-08 5.1E-13 79.9 10.0 210 4-223 101-342 (362)
40 cd05023 S-100A11 S-100A11: S-1 98.9 2E-08 4.4E-13 69.7 8.6 69 154-226 9-80 (89)
41 cd00052 EH Eps15 homology doma 98.8 1.6E-08 3.5E-13 66.3 7.5 61 157-227 2-62 (67)
42 smart00027 EH Eps15 homology d 98.8 2.1E-08 4.5E-13 70.9 8.2 65 153-227 9-73 (96)
43 cd05026 S-100Z S-100Z: S-100Z 98.8 2.9E-08 6.2E-13 69.7 8.6 69 77-147 7-83 (93)
44 cd00252 SPARC_EC SPARC_EC; ext 98.8 2.9E-08 6.3E-13 72.2 8.0 62 153-226 47-108 (116)
45 PF13833 EF-hand_8: EF-hand do 98.8 2E-08 4.3E-13 63.0 6.3 52 167-226 1-53 (54)
46 KOG0036 Predicted mitochondria 98.8 8.1E-08 1.8E-12 82.3 11.8 123 117-252 14-143 (463)
47 cd05027 S-100B S-100B: S-100B 98.8 4.2E-08 9.1E-13 68.0 8.1 68 77-146 5-80 (88)
48 KOG0040 Ca2+-binding actin-bun 98.8 2.9E-07 6.2E-12 89.3 15.9 141 71-225 2244-2397(2399)
49 KOG4666 Predicted phosphate ac 98.8 4.7E-08 1E-12 81.2 8.8 165 60-238 206-372 (412)
50 cd00051 EFh EF-hand, calcium b 98.7 6.1E-08 1.3E-12 61.8 7.2 61 156-224 2-62 (63)
51 KOG0031 Myosin regulatory ligh 98.7 1.4E-07 3E-12 70.3 9.8 98 118-227 33-130 (171)
52 cd00052 EH Eps15 homology doma 98.7 6.5E-08 1.4E-12 63.3 6.9 59 84-145 3-61 (67)
53 cd00213 S-100 S-100: S-100 dom 98.7 1E-07 2.2E-12 66.2 8.0 69 76-146 4-80 (88)
54 cd05025 S-100A1 S-100A1: S-100 98.7 1.1E-07 2.5E-12 66.6 7.3 67 78-146 7-81 (92)
55 cd05029 S-100A6 S-100A6: S-100 98.7 2.1E-07 4.6E-12 64.5 8.5 68 77-146 7-80 (88)
56 cd05023 S-100A11 S-100A11: S-1 98.6 2.2E-07 4.7E-12 64.5 7.9 69 76-146 5-81 (89)
57 KOG4251 Calcium binding protei 98.6 2.3E-07 5E-12 74.3 8.6 187 39-227 97-310 (362)
58 cd05031 S-100A10_like S-100A10 98.6 2.8E-07 6.1E-12 64.8 8.1 66 79-146 7-80 (94)
59 cd00051 EFh EF-hand, calcium b 98.6 4E-07 8.6E-12 57.9 7.8 60 120-180 3-62 (63)
60 cd05030 calgranulins Calgranul 98.6 2.9E-07 6.2E-12 63.9 7.5 67 154-227 8-80 (88)
61 cd00252 SPARC_EC SPARC_EC; ext 98.5 6.4E-07 1.4E-11 65.2 8.1 63 76-143 44-106 (116)
62 KOG0030 Myosin essential light 98.5 2.9E-06 6.3E-11 62.3 11.0 105 117-227 11-117 (152)
63 PF14658 EF-hand_9: EF-hand do 98.5 6.6E-07 1.4E-11 57.6 6.6 62 158-226 2-64 (66)
64 PF13833 EF-hand_8: EF-hand do 98.5 7.3E-07 1.6E-11 55.8 6.2 49 131-180 2-51 (54)
65 PF00036 EF-hand_1: EF hand; 98.5 2.3E-07 5E-12 50.1 3.3 26 156-181 2-27 (29)
66 cd05030 calgranulins Calgranul 98.4 1.5E-06 3.2E-11 60.3 7.6 71 76-146 4-80 (88)
67 KOG2643 Ca2+ binding protein, 98.3 1.2E-05 2.6E-10 69.7 12.1 154 56-225 212-383 (489)
68 KOG0041 Predicted Ca2+-binding 98.3 6.5E-06 1.4E-10 64.2 9.2 110 68-179 87-200 (244)
69 PF00036 EF-hand_1: EF hand; 98.3 1.4E-06 3.1E-11 47.0 3.7 27 119-145 2-28 (29)
70 cd05024 S-100A10 S-100A10: A s 98.3 1.1E-05 2.4E-10 55.6 8.8 68 77-147 5-78 (91)
71 KOG0041 Predicted Ca2+-binding 98.2 7.2E-06 1.6E-10 63.9 7.7 102 118-224 100-201 (244)
72 KOG0751 Mitochondrial aspartat 98.2 3.2E-05 7E-10 68.1 12.4 189 12-223 44-241 (694)
73 cd05024 S-100A10 S-100A10: A s 98.2 4.7E-06 1E-10 57.5 5.9 69 154-227 8-77 (91)
74 KOG0751 Mitochondrial aspartat 98.2 3.9E-05 8.4E-10 67.6 12.8 104 74-182 30-136 (694)
75 KOG4065 Uncharacterized conser 98.2 7.9E-06 1.7E-10 57.9 6.6 66 158-223 71-142 (144)
76 KOG0038 Ca2+-binding kinase in 98.1 1.1E-05 2.5E-10 59.6 6.7 116 59-181 55-176 (189)
77 PRK12309 transaldolase/EF-hand 98.0 2.3E-05 5E-10 68.9 8.2 57 149-226 329-385 (391)
78 PF13405 EF-hand_6: EF-hand do 98.0 7.1E-06 1.5E-10 45.0 3.2 27 155-181 1-27 (31)
79 KOG0377 Protein serine/threoni 98.0 5.5E-05 1.2E-09 65.8 9.9 64 118-181 548-614 (631)
80 PF13202 EF-hand_5: EF hand; P 98.0 1E-05 2.2E-10 42.0 3.1 24 156-179 1-24 (25)
81 KOG2562 Protein phosphatase 2 98.0 0.00032 6.9E-09 61.6 14.0 208 7-232 142-385 (493)
82 PF14658 EF-hand_9: EF-hand do 97.9 4.8E-05 1E-09 49.0 6.6 58 123-180 4-62 (66)
83 PF12763 EF-hand_4: Cytoskelet 97.9 1.5E-05 3.3E-10 56.8 4.5 68 74-145 4-71 (104)
84 KOG0040 Ca2+-binding actin-bun 97.9 0.00012 2.6E-09 72.0 10.9 101 118-225 2254-2360(2399)
85 KOG1029 Endocytic adaptor prot 97.9 0.00036 7.7E-09 64.6 13.2 139 73-225 9-256 (1118)
86 PRK12309 transaldolase/EF-hand 97.9 5E-05 1.1E-09 66.8 7.5 55 116-184 333-387 (391)
87 PF13202 EF-hand_5: EF hand; P 97.8 3.1E-05 6.8E-10 40.1 2.9 24 201-224 2-25 (25)
88 KOG0033 Ca2+/calmodulin-depend 97.7 9.2E-06 2E-10 66.0 0.9 36 1-36 239-274 (355)
89 PF14788 EF-hand_10: EF hand; 97.7 0.00018 3.9E-09 43.7 5.4 48 171-226 2-49 (51)
90 KOG0046 Ca2+-binding actin-bun 97.5 0.00033 7.1E-09 62.3 7.4 74 71-147 10-87 (627)
91 PF12763 EF-hand_4: Cytoskelet 97.5 0.00054 1.2E-08 48.9 7.1 65 151-226 7-71 (104)
92 PF10591 SPARC_Ca_bdg: Secrete 97.5 5.1E-05 1.1E-09 55.1 1.9 64 150-223 50-113 (113)
93 KOG0169 Phosphoinositide-speci 97.4 0.0055 1.2E-07 57.2 13.7 141 77-227 133-275 (746)
94 PF14788 EF-hand_10: EF hand; 97.3 0.0012 2.7E-08 40.1 5.9 47 134-181 2-48 (51)
95 PF13405 EF-hand_6: EF-hand do 97.2 0.00053 1.2E-08 37.4 3.6 26 119-144 2-27 (31)
96 PF10591 SPARC_Ca_bdg: Secrete 97.0 0.00058 1.3E-08 49.5 2.8 54 84-140 58-111 (113)
97 KOG0046 Ca2+-binding actin-bun 97.0 0.0029 6.3E-08 56.5 7.3 66 154-225 19-84 (627)
98 KOG4347 GTPase-activating prot 97.0 0.0025 5.5E-08 58.3 7.0 112 63-176 487-612 (671)
99 PF09279 EF-hand_like: Phospho 96.9 0.0037 8.1E-08 42.6 6.3 69 155-227 1-70 (83)
100 PF09069 EF-hand_3: EF-hand; 96.9 0.0048 1E-07 42.5 6.6 79 153-234 2-83 (90)
101 KOG4666 Predicted phosphate ac 96.8 0.0021 4.6E-08 54.1 5.0 98 80-181 259-358 (412)
102 smart00054 EFh EF-hand, calciu 96.5 0.0032 6.9E-08 32.6 2.7 25 156-180 2-26 (29)
103 smart00054 EFh EF-hand, calciu 96.4 0.0053 1.1E-07 31.7 3.4 26 201-226 3-28 (29)
104 KOG0032 Ca2+/calmodulin-depend 96.4 0.0011 2.3E-08 58.6 0.4 35 1-35 265-299 (382)
105 PLN02952 phosphoinositide phos 96.2 0.071 1.5E-06 49.6 11.5 94 130-227 13-111 (599)
106 PF05042 Caleosin: Caleosin re 95.8 0.094 2E-06 40.5 8.8 138 81-224 8-164 (174)
107 KOG0615 Serine/threonine prote 95.7 0.0038 8.3E-08 54.5 0.8 36 1-36 409-444 (475)
108 PLN03225 Serine/threonine-prot 95.6 0.019 4.1E-07 53.6 5.1 120 4-143 425-546 (566)
109 KOG4578 Uncharacterized conser 95.5 0.0086 1.9E-07 50.5 2.3 68 155-229 334-401 (421)
110 KOG4065 Uncharacterized conser 95.4 0.099 2.2E-06 37.4 6.8 67 72-142 61-142 (144)
111 KOG3555 Ca2+-binding proteogly 95.3 0.044 9.6E-07 46.7 5.8 100 74-180 201-308 (434)
112 KOG3866 DNA-binding protein of 94.9 0.098 2.1E-06 44.0 6.6 92 135-226 225-324 (442)
113 KOG0588 Serine/threonine prote 94.9 0.011 2.4E-07 54.7 1.1 32 1-32 235-266 (786)
114 KOG0599 Phosphorylase kinase g 94.7 0.0079 1.7E-07 50.1 -0.2 36 1-36 255-290 (411)
115 KOG1707 Predicted Ras related/ 94.5 0.35 7.7E-06 44.4 9.6 152 73-231 188-348 (625)
116 PF09279 EF-hand_like: Phospho 94.5 0.12 2.5E-06 35.1 5.2 62 119-181 2-68 (83)
117 KOG1707 Predicted Ras related/ 94.4 0.26 5.7E-06 45.2 8.6 179 37-226 189-377 (625)
118 KOG3555 Ca2+-binding proteogly 94.3 0.058 1.3E-06 46.0 4.1 63 153-227 249-311 (434)
119 KOG0169 Phosphoinositide-speci 93.9 0.49 1.1E-05 44.7 9.5 64 117-181 136-199 (746)
120 KOG0035 Ca2+-binding actin-bun 93.8 0.42 9.1E-06 46.2 9.0 100 76-178 743-848 (890)
121 KOG0039 Ferric reductase, NADH 93.7 0.24 5.3E-06 46.9 7.4 94 131-232 2-95 (646)
122 KOG0604 MAP kinase-activated p 93.6 0.023 5E-07 48.0 0.5 34 1-34 294-327 (400)
123 KOG1029 Endocytic adaptor prot 93.3 0.12 2.6E-06 48.6 4.4 69 75-146 190-258 (1118)
124 KOG1955 Ral-GTPase effector RA 93.2 0.26 5.6E-06 44.2 6.2 72 72-146 223-294 (737)
125 KOG4286 Dystrophin-like protei 93.1 1.7 3.7E-05 41.1 11.4 164 60-233 400-587 (966)
126 PF05042 Caleosin: Caleosin re 92.8 0.87 1.9E-05 35.3 7.8 62 118-180 97-164 (174)
127 PF09068 EF-hand_2: EF hand; 92.3 1 2.2E-05 33.3 7.5 94 64-180 25-123 (127)
128 KOG0607 MAP kinase-interacting 92.2 0.045 9.7E-07 46.7 0.2 36 1-36 333-368 (463)
129 KOG4347 GTPase-activating prot 91.7 0.24 5.2E-06 45.8 4.3 78 134-220 535-612 (671)
130 KOG0998 Synaptic vesicle prote 91.7 0.26 5.6E-06 48.1 4.8 140 73-226 122-345 (847)
131 PF08726 EFhand_Ca_insen: Ca2+ 91.7 0.11 2.3E-06 34.0 1.5 61 151-223 3-66 (69)
132 KOG4578 Uncharacterized conser 91.7 0.13 2.8E-06 43.6 2.4 63 119-181 335-397 (421)
133 cd07876 STKc_JNK2 Catalytic do 91.5 0.087 1.9E-06 45.9 1.3 32 2-33 288-319 (359)
134 KOG0575 Polo-like serine/threo 91.3 0.089 1.9E-06 48.2 1.1 32 1-32 241-272 (592)
135 KOG0603 Ribosomal protein S6 k 91.0 0.1 2.2E-06 48.2 1.2 32 1-32 535-566 (612)
136 cd07875 STKc_JNK1 Catalytic do 90.6 0.12 2.6E-06 45.1 1.3 32 2-33 291-322 (364)
137 cd07874 STKc_JNK3 Catalytic do 90.4 0.12 2.6E-06 45.0 1.1 32 2-33 284-315 (355)
138 PTZ00036 glycogen synthase kin 90.1 0.11 2.4E-06 46.9 0.6 33 2-34 324-356 (440)
139 KOG0660 Mitogen-activated prot 89.8 0.15 3.3E-06 43.9 1.2 34 1-34 282-315 (359)
140 cd07859 STKc_TDY_MAPK_plant Ca 89.6 0.17 3.6E-06 43.5 1.3 35 2-36 263-297 (338)
141 cd07853 STKc_NLK Catalytic dom 89.5 0.15 3.2E-06 44.8 0.9 34 2-35 261-294 (372)
142 KOG1027 Serine/threonine prote 89.3 1.2 2.6E-05 42.8 6.6 30 3-32 741-770 (903)
143 cd07878 STKc_p38beta_MAPK11 Ca 88.8 0.19 4E-06 43.5 1.0 33 2-34 271-303 (343)
144 KOG0585 Ca2+/calmodulin-depend 88.3 0.21 4.6E-06 44.8 1.1 33 2-34 345-377 (576)
145 PF05517 p25-alpha: p25-alpha 88.0 1.7 3.8E-05 33.2 5.8 65 80-146 2-70 (154)
146 KOG0579 Ste20-like serine/thre 87.5 0.39 8.4E-06 44.9 2.2 43 2-44 262-304 (1187)
147 cd07850 STKc_JNK Catalytic dom 87.5 0.21 4.6E-06 43.4 0.6 32 2-33 284-315 (353)
148 KOG0583 Serine/threonine prote 87.5 0.26 5.6E-06 43.5 1.1 33 2-34 248-280 (370)
149 cd07851 STKc_p38 Catalytic dom 87.1 0.28 6.1E-06 42.5 1.1 33 2-34 271-303 (343)
150 cd07858 STKc_TEY_MAPK_plant Ca 86.8 0.27 5.9E-06 42.4 0.9 33 2-34 264-296 (337)
151 cd06650 PKc_MEK1 Catalytic dom 86.4 0.29 6.4E-06 42.2 0.9 34 2-35 272-305 (333)
152 cd07854 STKc_MAPK4_6 Catalytic 85.9 0.37 8E-06 41.7 1.2 33 2-34 273-305 (342)
153 KOG1955 Ral-GTPase effector RA 85.8 2.2 4.8E-05 38.5 5.9 62 154-225 231-292 (737)
154 KOG0042 Glycerol-3-phosphate d 85.5 1.6 3.4E-05 40.2 4.9 74 72-147 585-659 (680)
155 KOG2243 Ca2+ release channel ( 85.3 1.6 3.4E-05 44.3 5.1 60 158-226 4061-4120(5019)
156 PLN02952 phosphoinositide phos 85.3 9.2 0.0002 36.0 10.0 86 95-181 13-109 (599)
157 KOG0198 MEKK and related serin 85.3 0.39 8.5E-06 41.3 1.1 36 1-36 248-283 (313)
158 cd07849 STKc_ERK1_2_like Catal 85.1 0.4 8.7E-06 41.3 1.1 33 2-34 265-297 (336)
159 KOG0035 Ca2+-binding actin-bun 85.0 2.9 6.2E-05 40.7 6.7 71 154-228 747-818 (890)
160 PF14513 DAG_kinase_N: Diacylg 84.4 1.6 3.5E-05 32.7 3.9 37 131-167 46-82 (138)
161 KOG3866 DNA-binding protein of 83.9 7.1 0.00015 33.2 7.8 87 86-181 250-353 (442)
162 cd07834 STKc_MAPK Catalytic do 83.9 0.47 1E-05 40.6 1.0 33 2-34 262-294 (330)
163 cd07880 STKc_p38gamma_MAPK12 C 83.2 0.52 1.1E-05 40.8 1.0 33 2-34 271-303 (343)
164 KOG0042 Glycerol-3-phosphate d 82.7 2.4 5.2E-05 39.0 4.9 64 155-226 594-657 (680)
165 KOG1167 Serine/threonine prote 82.3 1.1 2.4E-05 39.6 2.5 35 2-36 354-388 (418)
166 PF08414 NADPH_Ox: Respiratory 82.2 2.6 5.7E-05 29.5 3.9 64 78-147 28-94 (100)
167 PF14513 DAG_kinase_N: Diacylg 81.9 2.4 5.2E-05 31.8 3.9 74 57-130 5-82 (138)
168 cd07879 STKc_p38delta_MAPK13 C 81.6 0.68 1.5E-05 40.0 1.1 33 2-34 270-302 (342)
169 KOG4301 Beta-dystrobrevin [Cyt 81.5 5.2 0.00011 34.4 6.2 121 119-246 112-238 (434)
170 cd07857 STKc_MPK1 Catalytic do 80.5 0.83 1.8E-05 39.2 1.3 32 2-33 265-296 (332)
171 KOG0666 Cyclin C-dependent kin 80.0 0.89 1.9E-05 39.0 1.2 34 2-35 310-343 (438)
172 cd05612 STKc_PRKX_like Catalyt 80.0 0.7 1.5E-05 38.9 0.6 35 2-36 222-261 (291)
173 cd07855 STKc_ERK5 Catalytic do 79.6 0.81 1.7E-05 39.4 0.9 33 2-34 267-299 (334)
174 PTZ00263 protein kinase A cata 79.1 0.76 1.6E-05 39.5 0.6 35 1-35 238-277 (329)
175 cd05571 STKc_PKB Catalytic dom 79.1 0.76 1.7E-05 39.4 0.6 36 1-36 218-258 (323)
176 cd07877 STKc_p38alpha_MAPK14 C 79.1 0.88 1.9E-05 39.4 0.9 33 2-34 273-305 (345)
177 KOG0665 Jun-N-terminal kinase 78.9 0.78 1.7E-05 39.3 0.5 31 3-33 284-314 (369)
178 cd05585 STKc_YPK1_like Catalyt 78.9 0.77 1.7E-05 39.1 0.5 36 1-36 216-254 (312)
179 cd05588 STKc_aPKC Catalytic do 78.5 0.85 1.8E-05 39.2 0.7 36 1-36 228-269 (329)
180 KOG0663 Protein kinase PITSLRE 77.6 1.2 2.7E-05 38.4 1.4 32 2-33 334-365 (419)
181 cd05570 STKc_PKC Catalytic dom 77.6 0.98 2.1E-05 38.6 0.8 36 1-36 219-259 (318)
182 KOG0610 Putative serine/threon 77.3 1.1 2.4E-05 39.7 1.0 35 1-35 360-398 (459)
183 cd05619 STKc_nPKC_theta Cataly 77.3 1.2 2.5E-05 38.2 1.2 36 1-36 219-255 (316)
184 cd05590 STKc_nPKC_eta Catalyti 77.0 1.1 2.3E-05 38.4 0.9 36 1-36 219-260 (320)
185 PF05517 p25-alpha: p25-alpha 76.8 31 0.00067 26.3 10.5 82 120-203 2-88 (154)
186 cd05620 STKc_nPKC_delta Cataly 76.7 1.1 2.4E-05 38.3 0.9 36 1-36 219-255 (316)
187 cd05614 STKc_MSK2_N N-terminal 76.3 1.1 2.4E-05 38.5 0.7 36 1-36 234-274 (332)
188 KOG2243 Ca2+ release channel ( 76.2 4.3 9.4E-05 41.4 4.7 58 86-145 4063-4120(5019)
189 cd06634 STKc_TAO2 Catalytic do 76.1 2 4.3E-05 36.4 2.3 35 2-36 240-274 (308)
190 cd05601 STKc_CRIK Catalytic do 75.3 1.3 2.9E-05 37.9 1.0 35 1-36 236-270 (330)
191 PLN02230 phosphoinositide phos 75.2 18 0.00039 34.1 8.3 73 151-227 26-103 (598)
192 KOG0669 Cyclin T-dependent kin 74.7 2.4 5.1E-05 35.4 2.2 37 2-38 288-324 (376)
193 cd05591 STKc_nPKC_epsilon Cata 74.0 1.3 2.8E-05 37.9 0.6 36 1-36 219-261 (321)
194 cd07856 STKc_Sty1_Hog1 Catalyt 73.7 1.7 3.7E-05 37.4 1.2 33 2-34 261-293 (328)
195 KOG1265 Phospholipase C [Lipid 73.4 44 0.00096 32.9 10.3 124 94-227 160-300 (1189)
196 cd06607 STKc_TAO Catalytic dom 73.2 2.1 4.6E-05 36.2 1.7 33 3-35 241-273 (307)
197 cd07852 STKc_MAPK15 Catalytic 73.0 1.7 3.6E-05 37.4 1.0 33 2-34 268-300 (337)
198 KOG1265 Phospholipase C [Lipid 72.9 53 0.0012 32.4 10.7 131 6-145 150-299 (1189)
199 PHA03210 serine/threonine kina 72.8 1.7 3.8E-05 39.9 1.2 31 4-34 429-459 (501)
200 cd05596 STKc_ROCK Catalytic do 72.5 1.7 3.7E-05 38.1 1.0 35 1-35 274-310 (370)
201 cd05593 STKc_PKB_gamma Catalyt 72.2 1.5 3.2E-05 37.8 0.5 36 1-36 218-258 (328)
202 PF09068 EF-hand_2: EF hand; 72.0 21 0.00046 26.3 6.6 71 155-225 42-124 (127)
203 KOG0659 Cdk activating kinase 71.4 1.8 3.9E-05 36.3 0.8 35 1-35 253-287 (318)
204 KOG0667 Dual-specificity tyros 71.1 1.9 4E-05 40.1 0.9 31 6-36 479-509 (586)
205 KOG0661 MAPK related serine/th 70.7 2.4 5.1E-05 38.3 1.4 33 2-34 264-296 (538)
206 PLN00181 protein SPA1-RELATED; 70.3 4.6 0.0001 39.4 3.5 33 3-35 239-271 (793)
207 cd05586 STKc_Sck1_like Catalyt 70.3 1.9 4.1E-05 37.0 0.8 36 1-36 221-260 (330)
208 cd07313 terB_like_2 tellurium 69.9 17 0.00036 25.4 5.5 50 95-145 12-65 (104)
209 cd05587 STKc_cPKC Catalytic do 69.8 1.9 4.2E-05 36.8 0.7 36 1-36 224-264 (324)
210 cd05594 STKc_PKB_alpha Catalyt 69.6 1.6 3.4E-05 37.4 0.1 36 1-36 219-259 (325)
211 cd05595 STKc_PKB_beta Catalyti 69.4 1.5 3.2E-05 37.6 -0.1 36 1-36 218-258 (323)
212 PLN02223 phosphoinositide phos 69.2 35 0.00077 31.7 8.6 76 151-227 13-93 (537)
213 PF08414 NADPH_Ox: Respiratory 69.1 30 0.00064 24.3 6.3 62 155-226 31-92 (100)
214 PTZ00426 cAMP-dependent protei 68.8 1.9 4.2E-05 37.3 0.5 36 1-36 251-291 (340)
215 cd05573 STKc_ROCK_NDR_like Cat 68.7 2.3 5E-05 36.6 1.0 35 1-36 257-292 (350)
216 cd05582 STKc_RSK_N N-terminal 68.5 2.5 5.5E-05 36.0 1.2 36 1-36 221-261 (318)
217 PLN02228 Phosphoinositide phos 67.9 24 0.00052 33.0 7.4 68 151-227 21-93 (567)
218 cd05600 STKc_Sid2p_Dbf2p Catal 67.5 2.4 5.2E-05 36.4 0.8 36 1-36 229-264 (333)
219 cd07313 terB_like_2 tellurium 67.1 26 0.00055 24.4 6.0 48 56-108 12-63 (104)
220 KOG1290 Serine/threonine prote 66.7 2.6 5.6E-05 38.3 0.9 30 7-36 528-557 (590)
221 cd05617 STKc_aPKC_zeta Catalyt 66.6 2.7 5.7E-05 36.1 0.9 36 1-36 226-267 (327)
222 KOG4004 Matricellular protein 66.0 3.6 7.8E-05 32.6 1.5 59 159-227 192-251 (259)
223 cd05618 STKc_aPKC_iota Catalyt 65.7 2.5 5.5E-05 36.3 0.7 35 1-35 228-268 (329)
224 cd05626 STKc_LATS2 Catalytic d 65.3 3.3 7.1E-05 36.4 1.3 36 1-36 275-312 (381)
225 cd06633 STKc_TAO3 Catalytic do 64.8 5 0.00011 34.1 2.3 33 2-34 246-278 (313)
226 cd05575 STKc_SGK Catalytic dom 64.6 3.3 7.2E-05 35.3 1.2 36 1-36 219-258 (323)
227 cd05584 STKc_p70S6K Catalytic 64.3 2.9 6.2E-05 35.8 0.7 36 1-36 223-263 (323)
228 cd06635 STKc_TAO1 Catalytic do 64.1 3.2 6.8E-05 35.3 0.9 33 2-34 250-282 (317)
229 PF08976 DUF1880: Domain of un 62.9 7.2 0.00016 28.2 2.4 32 191-226 4-35 (118)
230 PF00404 Dockerin_1: Dockerin 62.5 14 0.0003 18.0 2.7 16 164-179 1-16 (21)
231 KOG4004 Matricellular protein 62.4 3.5 7.7E-05 32.7 0.8 56 123-181 193-249 (259)
232 cd05580 STKc_PKA Catalytic dom 62.0 3.2 6.9E-05 34.7 0.5 35 2-36 222-261 (290)
233 KOG3442 Uncharacterized conser 60.6 22 0.00047 26.0 4.4 47 167-218 52-98 (132)
234 cd05599 STKc_NDR_like Catalyti 59.8 3.9 8.4E-05 35.5 0.7 35 1-36 266-303 (364)
235 PLN02222 phosphoinositide phos 58.9 46 0.001 31.3 7.5 68 152-227 23-91 (581)
236 cd05625 STKc_LATS1 Catalytic d 58.9 5.2 0.00011 35.1 1.4 35 1-36 275-312 (382)
237 cd05589 STKc_PKN Catalytic dom 57.8 4.3 9.3E-05 34.7 0.6 35 2-36 225-264 (324)
238 cd05616 STKc_cPKC_beta Catalyt 57.5 4.6 0.0001 34.5 0.8 36 1-36 224-264 (323)
239 cd05623 STKc_MRCK_alpha Cataly 57.5 5.1 0.00011 34.4 1.1 36 1-36 236-273 (332)
240 KOG0201 Serine/threonine prote 57.4 6 0.00013 35.4 1.5 34 2-35 236-269 (467)
241 cd05592 STKc_nPKC_theta_delta 57.3 5.1 0.00011 34.1 1.0 35 2-36 220-255 (316)
242 cd05610 STKc_MASTL Catalytic d 54.9 4.7 0.0001 38.6 0.5 34 2-35 607-640 (669)
243 cd05598 STKc_LATS Catalytic do 54.4 5.7 0.00012 34.7 0.9 35 1-36 271-308 (376)
244 cd05604 STKc_SGK3 Catalytic do 54.3 6.2 0.00013 33.7 1.1 35 2-36 220-258 (325)
245 KOG1151 Tousled-like protein k 54.1 4.4 9.6E-05 36.5 0.1 34 1-34 713-746 (775)
246 cd02977 ArsC_family Arsenate R 54.0 20 0.00043 25.1 3.5 58 169-235 34-94 (105)
247 PF03705 CheR_N: CheR methyltr 53.3 26 0.00057 21.3 3.6 52 173-229 2-56 (57)
248 cd05597 STKc_DMPK_like Catalyt 53.0 7.5 0.00016 33.3 1.4 35 1-35 236-272 (331)
249 cd05621 STKc_ROCK2 Catalytic d 52.9 6.7 0.00015 34.4 1.1 35 1-35 274-310 (370)
250 KOG0998 Synaptic vesicle prote 52.7 9.4 0.0002 37.6 2.1 71 73-146 276-346 (847)
251 cd05627 STKc_NDR2 Catalytic do 52.1 6.9 0.00015 34.0 1.0 35 1-36 263-300 (360)
252 cd05602 STKc_SGK1 Catalytic do 51.4 7.7 0.00017 33.1 1.2 35 1-35 219-257 (325)
253 PF01023 S_100: S-100/ICaBP ty 51.0 34 0.00074 20.0 3.6 34 77-110 3-36 (44)
254 KOG2871 Uncharacterized conser 51.0 13 0.00027 32.6 2.3 31 151-181 306-336 (449)
255 cd03035 ArsC_Yffb Arsenate Red 50.8 20 0.00044 25.3 3.1 35 203-237 60-94 (105)
256 PF12174 RST: RCD1-SRO-TAF4 (R 50.7 33 0.00072 22.4 3.8 49 131-183 6-54 (70)
257 KOG0592 3-phosphoinositide-dep 50.5 8.9 0.00019 35.4 1.4 34 2-35 311-344 (604)
258 PF04876 Tenui_NCP: Tenuivirus 49.7 71 0.0015 24.2 5.8 41 191-234 128-168 (175)
259 cd05629 STKc_NDR_like_fungal C 49.6 7 0.00015 34.2 0.7 34 1-35 275-311 (377)
260 PTZ00283 serine/threonine prot 49.2 7.1 0.00015 35.9 0.7 34 1-34 269-302 (496)
261 TIGR01848 PHA_reg_PhaR polyhyd 49.1 33 0.00072 24.4 3.8 21 161-181 10-30 (107)
262 cd05615 STKc_cPKC_alpha Cataly 48.7 7.6 0.00017 33.2 0.7 36 1-36 224-264 (323)
263 PLN02228 Phosphoinositide phos 48.3 1E+02 0.0022 29.1 7.9 64 73-143 20-90 (567)
264 KOG0658 Glycogen synthase kina 47.5 8.1 0.00017 33.7 0.7 34 1-34 278-311 (364)
265 cd05628 STKc_NDR1 Catalytic do 46.9 10 0.00022 33.0 1.3 36 1-36 263-300 (363)
266 cd08327 CARD_RAIDD Caspase act 46.4 44 0.00096 23.2 4.1 55 167-234 32-86 (94)
267 PTZ00267 NIMA-related protein 46.2 7.8 0.00017 35.4 0.4 33 2-34 296-328 (478)
268 cd05609 STKc_MAST Catalytic do 44.3 9.8 0.00021 32.0 0.7 37 2-38 243-282 (305)
269 cd03034 ArsC_ArsC Arsenate Red 42.8 48 0.001 23.6 4.1 60 169-238 34-96 (112)
270 TIGR00014 arsC arsenate reduct 42.8 45 0.00097 23.9 3.9 63 170-238 35-97 (114)
271 cd05603 STKc_SGK2 Catalytic do 41.9 14 0.00031 31.4 1.4 35 2-36 220-258 (321)
272 KOG0582 Ste20-like serine/thre 41.8 12 0.00025 33.8 0.8 33 3-35 267-299 (516)
273 PF09682 Holin_LLH: Phage holi 40.5 1.3E+02 0.0029 21.3 6.0 52 157-208 54-105 (108)
274 PRK10026 arsenate reductase; P 40.1 50 0.0011 24.9 3.9 62 170-238 38-99 (141)
275 KOG1035 eIF-2alpha kinase GCN2 40.1 16 0.00035 37.1 1.6 32 3-34 845-876 (1351)
276 PF14069 SpoVIF: Stage VI spor 39.9 1.2E+02 0.0025 20.4 5.7 52 169-225 26-77 (79)
277 PF05099 TerB: Tellurite resis 39.9 1E+02 0.0022 22.5 5.7 12 95-106 36-47 (140)
278 PF12486 DUF3702: ImpA domain 39.0 78 0.0017 24.1 4.8 40 155-194 70-109 (148)
279 KOG0605 NDR and related serine 38.4 11 0.00024 34.6 0.2 35 1-36 415-452 (550)
280 PF11829 DUF3349: Protein of u 38.0 1.1E+02 0.0024 21.4 5.0 65 134-202 20-84 (96)
281 PLN02222 phosphoinositide phos 37.5 1.3E+02 0.0027 28.5 6.8 63 75-144 23-89 (581)
282 cd03032 ArsC_Spx Arsenate Redu 37.1 93 0.002 22.2 4.9 62 169-237 35-96 (115)
283 PF07879 PHB_acc_N: PHB/PHA ac 36.5 28 0.00061 22.3 1.7 21 161-181 10-30 (64)
284 PF12174 RST: RCD1-SRO-TAF4 (R 36.5 1.2E+02 0.0026 19.7 5.7 34 72-110 20-53 (70)
285 PF04558 tRNA_synt_1c_R1: Glut 36.5 33 0.00072 26.5 2.5 51 151-206 82-132 (164)
286 PF00427 PBS_linker_poly: Phyc 36.4 45 0.00098 24.8 3.1 71 171-247 5-79 (131)
287 PLN02230 phosphoinositide phos 35.3 1.5E+02 0.0033 28.1 7.0 14 214-227 182-195 (598)
288 PF14164 YqzH: YqzH-like prote 34.8 1.3E+02 0.0027 19.4 5.1 34 154-187 8-42 (64)
289 PF03979 Sigma70_r1_1: Sigma-7 34.2 69 0.0015 21.4 3.5 39 155-201 8-46 (82)
290 PRK13344 spxA transcriptional 34.2 47 0.001 24.6 2.9 62 169-237 35-96 (132)
291 KOG4717 Serine/threonine prote 34.0 17 0.00036 33.7 0.5 36 1-36 242-277 (864)
292 PF13720 Acetyltransf_11: Udp 33.2 1.5E+02 0.0033 19.9 5.5 55 72-132 26-80 (83)
293 PTZ00266 NIMA-related protein 32.7 16 0.00035 36.7 0.3 32 2-33 268-299 (1021)
294 cd08330 CARD_ASC_NALP1 Caspase 32.7 1.2E+02 0.0026 20.3 4.5 54 167-233 26-80 (82)
295 cd06403 PB1_Par6 The PB1 domai 32.3 15 0.00033 24.6 0.0 63 160-233 11-75 (80)
296 COG5394 Uncharacterized protei 32.3 51 0.0011 25.4 2.8 21 161-181 19-39 (193)
297 COG1393 ArsC Arsenate reductas 31.6 1.4E+02 0.0029 21.7 4.9 67 170-246 37-106 (117)
298 PF05920 Homeobox_KN: Homeobox 31.5 82 0.0018 18.0 3.0 28 57-84 8-35 (40)
299 PF05674 DUF816: Baculovirus p 31.4 2.4E+02 0.0053 21.7 6.4 72 175-251 29-100 (171)
300 KOG0598 Ribosomal protein S6 k 31.0 25 0.00054 30.7 1.1 36 1-36 249-288 (357)
301 KOG0584 Serine/threonine prote 31.0 22 0.00048 33.4 0.8 33 2-35 270-302 (632)
302 KOG0600 Cdc2-related protein k 30.9 27 0.00059 32.1 1.4 32 1-32 372-403 (560)
303 cd05622 STKc_ROCK1 Catalytic d 30.2 25 0.00054 30.8 1.1 36 1-36 274-311 (371)
304 cd07316 terB_like_DjlA N-termi 30.1 1.9E+02 0.004 19.9 8.2 12 95-106 12-23 (106)
305 KOG0596 Dual specificity; seri 30.0 61 0.0013 30.4 3.4 30 5-34 603-632 (677)
306 KOG1264 Phospholipase C [Lipid 29.4 2.8E+02 0.006 27.6 7.6 151 74-229 137-296 (1267)
307 PRK12559 transcriptional regul 29.0 90 0.0019 23.0 3.7 62 169-237 35-96 (131)
308 cd03033 ArsC_15kD Arsenate Red 28.9 84 0.0018 22.5 3.4 35 203-238 61-95 (113)
309 cd05624 STKc_MRCK_beta Catalyt 28.8 27 0.00059 29.9 1.0 36 1-36 236-273 (331)
310 KOG4279 Serine/threonine prote 28.5 27 0.00058 33.8 0.9 32 1-32 804-835 (1226)
311 PRK01655 spxA transcriptional 28.4 1.1E+02 0.0024 22.5 4.1 34 203-237 63-96 (131)
312 KOG4403 Cell surface glycoprot 28.0 1.1E+02 0.0023 27.6 4.4 58 119-180 70-127 (575)
313 KOG2419 Phosphatidylserine dec 27.7 59 0.0013 30.9 2.9 91 154-249 437-554 (975)
314 cd00086 homeodomain Homeodomai 27.6 1.2E+02 0.0026 18.1 3.7 29 57-85 22-50 (59)
315 KOG0039 Ferric reductase, NADH 27.0 1.6E+02 0.0035 28.3 5.8 80 96-181 2-88 (646)
316 PF11116 DUF2624: Protein of u 26.5 2.1E+02 0.0047 19.5 7.7 50 133-183 14-63 (85)
317 cd05100 PTKc_FGFR3 Catalytic d 26.3 33 0.00071 29.3 1.1 28 2-29 262-289 (334)
318 TIGR00988 hip integration host 26.1 68 0.0015 21.9 2.5 46 172-221 2-49 (94)
319 PF05872 DUF853: Bacterial pro 26.0 2.1E+02 0.0045 26.3 5.9 105 98-218 105-219 (502)
320 PF09373 PMBR: Pseudomurein-bi 25.7 75 0.0016 17.2 2.1 14 131-144 2-15 (33)
321 PF12872 OST-HTH: OST-HTH/LOTU 25.5 1.9E+02 0.004 18.4 4.9 19 205-223 38-56 (74)
322 PF08557 Lipid_DES: Sphingolip 25.4 82 0.0018 18.0 2.2 19 221-239 20-38 (39)
323 COG3793 TerB Tellurite resista 25.2 2.3E+02 0.005 21.4 5.2 17 130-146 37-53 (144)
324 PF08260 Kinin: Insect kinin p 25.1 31 0.00066 12.5 0.3 6 244-249 2-7 (8)
325 PF09873 DUF2100: Uncharacteri 25.0 1.8E+02 0.0038 23.5 4.8 18 130-147 38-55 (215)
326 TIGR02675 tape_meas_nterm tape 24.9 2.1E+02 0.0045 18.8 5.1 36 71-110 7-42 (75)
327 KOG0616 cAMP-dependent protein 24.9 32 0.0007 29.5 0.7 36 1-36 264-304 (355)
328 PF09851 SHOCT: Short C-termin 24.7 1.2E+02 0.0027 16.1 3.2 13 95-107 13-25 (31)
329 TIGR00624 tag DNA-3-methyladen 24.6 29 0.00064 27.3 0.4 46 152-201 51-96 (179)
330 TIGR01616 nitro_assoc nitrogen 24.1 1.2E+02 0.0026 22.2 3.6 35 203-238 62-96 (126)
331 KOG1954 Endocytosis/signaling 24.0 1.1E+02 0.0023 27.4 3.7 44 168-221 457-500 (532)
332 cd01657 Ribosomal_L7_archeal_e 23.8 2.4E+02 0.0051 21.7 5.3 69 169-254 55-127 (159)
333 PRK12461 UDP-N-acetylglucosami 23.6 3.6E+02 0.0077 22.4 6.7 55 72-132 198-252 (255)
334 KOG0506 Glutaminase (contains 23.3 3.2E+02 0.007 25.2 6.6 71 156-231 88-163 (622)
335 KOG2557 Uncharacterized conser 22.8 5.2E+02 0.011 23.0 7.5 102 131-233 72-182 (427)
336 KOG4070 Putative signal transd 22.5 2.8E+02 0.0061 21.2 5.2 84 79-163 14-107 (180)
337 PF03656 Pam16: Pam16; InterP 22.3 2.1E+02 0.0046 21.1 4.5 44 169-217 53-96 (127)
338 KOG1785 Tyrosine kinase negati 22.3 3.3E+02 0.0072 24.4 6.3 87 96-186 188-278 (563)
339 PF08100 Dimerisation: Dimeris 22.3 91 0.002 18.9 2.2 39 85-125 11-49 (51)
340 KOG2301 Voltage-gated Ca2+ cha 22.0 53 0.0011 34.9 1.7 72 73-146 1410-1485(1592)
341 COG5562 Phage envelope protein 21.9 78 0.0017 23.6 2.1 28 119-146 74-101 (137)
342 KOG3449 60S acidic ribosomal p 21.7 3.1E+02 0.0068 19.7 5.2 41 156-200 3-43 (112)
343 PLN02508 magnesium-protoporphy 21.7 3.2E+02 0.007 23.8 6.0 120 117-253 41-163 (357)
344 PF06648 DUF1160: Protein of u 21.6 3.3E+02 0.0072 19.9 6.3 44 151-200 34-77 (122)
345 PF13759 2OG-FeII_Oxy_5: Putat 21.4 33 0.00073 23.8 0.2 16 238-253 70-85 (101)
346 PRK10353 3-methyl-adenine DNA 21.2 28 0.00061 27.6 -0.3 46 152-201 52-97 (187)
347 PF11569 Homez: Homeodomain le 20.8 1.3E+02 0.0029 18.7 2.7 29 56-84 19-47 (56)
348 CHL00185 ycf59 magnesium-proto 20.6 2.5E+02 0.0054 24.4 5.1 34 219-252 128-162 (351)
349 smart00389 HOX Homeodomain. DN 20.1 2E+02 0.0044 16.9 3.6 26 59-84 24-49 (56)
350 KOG0506 Glutaminase (contains 20.1 4.4E+02 0.0096 24.4 6.7 95 120-215 89-198 (622)
No 1
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.95 E-value=4.4e-26 Score=178.50 Aligned_cols=172 Identities=42% Similarity=0.670 Sum_probs=152.5
Q ss_pred hHhHHHHHHhCC----CCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCCCCc-ccH
Q 025118 62 VGDLARLAAESR----FSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNGV-IDF 136 (257)
Q Consensus 62 ~~~~~~~~~~~~----~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~-I~f 136 (257)
.+.+..+...+. |+..||.+++.+|.+++++. ++|+|+.+||..+. ....++...++++.++.+++|. |+|
T Consensus 11 ~~~~~~~~~~~~~~~~fs~~EI~~L~~rF~kl~~~~-~~g~lt~eef~~i~---~~~~Np~~~rI~~~f~~~~~~~~v~F 86 (187)
T KOG0034|consen 11 DEDLEELQMYTGDPTQFSANEIERLYERFKKLDRNN-GDGYLTKEEFLSIP---ELALNPLADRIIDRFDTDGNGDPVDF 86 (187)
T ss_pred hhhhHHHHhccCCCcccCHHHHHHHHHHHHHhcccc-ccCccCHHHHHHHH---HHhcCcHHHHHHHHHhccCCCCccCH
Confidence 455566666667 99999999999999999864 88999999999876 3566788899999999999998 999
Q ss_pred HHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCccc
Q 025118 137 EEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRIN 216 (257)
Q Consensus 137 ~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~ 216 (257)
++|+.++..+.+....+++++.+|+.||.+++|+|+++|+.+++.++....... +++.++.+++.+|.++|.++||.|+
T Consensus 87 ~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~-~~e~~~~i~d~t~~e~D~d~DG~Is 165 (187)
T KOG0034|consen 87 EEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDM-SDEQLEDIVDKTFEEADTDGDGKIS 165 (187)
T ss_pred HHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcc-hHHHHHHHHHHHHHHhCCCCCCcCc
Confidence 999999999998888888999999999999999999999999998764332222 5899999999999999999999999
Q ss_pred HHHHHHHHHhChHHHHhcCCCC
Q 025118 217 KEEWKEFAVRNPSLLKNMTLPY 238 (257)
Q Consensus 217 ~~eF~~~l~~~~~~~~~~~~~~ 238 (257)
++||.+++.++|.+.+.|++++
T Consensus 166 feEf~~~v~~~P~~~~~m~~~~ 187 (187)
T KOG0034|consen 166 FEEFCKVVEKQPDLLEKMTIRF 187 (187)
T ss_pred HHHHHHHHHcCccHHHHcCCCC
Confidence 9999999999999999998763
No 2
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.94 E-value=1.1e-25 Score=170.46 Aligned_cols=151 Identities=26% Similarity=0.480 Sum_probs=138.4
Q ss_pred HHHhCCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCC-hHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 025118 68 LAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGE-NLFLDRVFDLFDEKKNGVIDFEEFVHALNVF 146 (257)
Q Consensus 68 ~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~-~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 146 (257)
+...+.|+.++++.++++|..+|++ ++|.|+..+|..+++.+|... ..++.+++..+|. +.|.|+|.+|+.++...
T Consensus 8 ~~~~~~~t~~qi~~lkeaF~l~D~d--~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~ 84 (160)
T COG5126 8 LLTFTQLTEEQIQELKEAFQLFDRD--SDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVK 84 (160)
T ss_pred hhhcccCCHHHHHHHHHHHHHhCcC--CCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHH
Confidence 3455789999999999999999999 999999999999998777554 5789999999999 99999999999999999
Q ss_pred CCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 147 HPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 147 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
......+++++.+|+.||.|++|+|+..+|+.++ +..|..++++++++++ +.+|.+++|.|+|++|.+.+..
T Consensus 85 ~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl----~~lge~~~deev~~ll----~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 85 LKRGDKEEELREAFKLFDKDHDGYISIGELRRVL----KSLGERLSDEEVEKLL----KEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred hccCCcHHHHHHHHHHhCCCCCceecHHHHHHHH----HhhcccCCHHHHHHHH----HhcCCCCCceEeHHHHHHHHhc
Confidence 8888899999999999999999999999999999 6789999999988877 7899999999999999999887
Q ss_pred ChH
Q 025118 227 NPS 229 (257)
Q Consensus 227 ~~~ 229 (257)
.|.
T Consensus 157 ~~~ 159 (160)
T COG5126 157 SPT 159 (160)
T ss_pred cCC
Confidence 653
No 3
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.93 E-value=2.4e-24 Score=168.70 Aligned_cols=177 Identities=32% Similarity=0.535 Sum_probs=156.3
Q ss_pred CCCCChHhHHHHHHhCCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcC-CCCC-hHHHHHHHHHHcCCCCCcc
Q 025118 57 KCRFDVGDLARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQA-PYGE-NLFLDRVFDLFDEKKNGVI 134 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~-~~~~-~~~~~~lf~~~d~~~~g~I 134 (257)
...++++.+.++...+.+++.+++.+++-|.... .+|.++.++|+.+++.. +.+. ...++.+|+.+|.|++|.|
T Consensus 6 ~~~~~~~~~e~l~~~t~f~~~ei~~~Yr~Fk~~c----P~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i 81 (193)
T KOG0044|consen 6 NSKLQPESLEQLVQQTKFSKKEIQQWYRGFKNEC----PSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTI 81 (193)
T ss_pred cccCCcHHHHHHHHhcCCCHHHHHHHHHHhcccC----CCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCc
Confidence 4567788889999999999999999999998865 68999999999998873 4343 4579999999999999999
Q ss_pred cHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcC---CCCHHHHHHHHHHHHHHcCCCC
Q 025118 135 DFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEI---KLPDDLLEAIIDKTFADADIDK 211 (257)
Q Consensus 135 ~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~---~~s~~~~~~~~~~~f~~~d~~~ 211 (257)
+|.||+.+++... .+..+++++.+|++||.||+|+|+++|+..++.+++...|. .......++.+..+|+.+|.|+
T Consensus 82 ~F~Efi~als~~~-rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~ 160 (193)
T KOG0044|consen 82 DFLEFICALSLTS-RGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNK 160 (193)
T ss_pred CHHHHHHHHHHHc-CCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCC
Confidence 9999999999998 88999999999999999999999999999999999887774 1234457788999999999999
Q ss_pred CCcccHHHHHHHHHhChHHHHhcCCCC
Q 025118 212 DGRINKEEWKEFAVRNPSLLKNMTLPY 238 (257)
Q Consensus 212 dg~I~~~eF~~~l~~~~~~~~~~~~~~ 238 (257)
||.|+++||.......|.+++.++...
T Consensus 161 Dg~lT~eef~~~~~~d~~i~~~l~~~~ 187 (193)
T KOG0044|consen 161 DGKLTLEEFIEGCKADPSILRALEQDP 187 (193)
T ss_pred CCcccHHHHHHHhhhCHHHHHHhhhcc
Confidence 999999999999999999999886433
No 4
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.89 E-value=5.2e-22 Score=152.75 Aligned_cols=143 Identities=27% Similarity=0.414 Sum_probs=126.2
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCC-
Q 025118 74 FSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYG-ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAP- 151 (257)
Q Consensus 74 ~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~- 151 (257)
++..++..+.++|..+|.+ ++|+|+..+|..+++.++.. ....+..+++.+|.+++|.|+|++|+.++........
T Consensus 2 ~~~~~~~el~~~F~~fD~d--~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~ 79 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKD--GDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTD 79 (151)
T ss_pred CCHHHHHHHHHHHHHHCCC--CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccc
Confidence 4567788899999999999 99999999999999987655 4568999999999999999999999999887753333
Q ss_pred ---hHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 152 ---IEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 152 ---~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
..+.++.+|+.||.|++|+|+.+||+.++ ...|.+.+.++++.++ +.+|.|+||.|+|++|++++..
T Consensus 80 ~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l----~~lg~~~~~~e~~~mi----~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 80 EEASSEELKEAFRVFDKDGDGFISASELKKVL----TSLGEKLTDEECKEMI----REVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred ccccHHHHHHHHHHHccCCCCcCcHHHHHHHH----HHhCCcCCHHHHHHHH----HhcCCCCCCeEeHHHHHHHHhc
Confidence 34599999999999999999999999999 6789999998877777 8899999999999999999875
No 5
>PTZ00183 centrin; Provisional
Probab=99.86 E-value=2.3e-20 Score=144.44 Aligned_cols=148 Identities=24% Similarity=0.366 Sum_probs=128.3
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCC
Q 025118 72 SRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYG-ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYA 150 (257)
Q Consensus 72 ~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~ 150 (257)
..++..+++.+...|..+|++ ++|.|+.+||..++...+.. ....+..+|..+|.+++|.|+|.||+.++.......
T Consensus 9 ~~~~~~~~~~~~~~F~~~D~~--~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~ 86 (158)
T PTZ00183 9 PGLTEDQKKEIREAFDLFDTD--GSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGER 86 (158)
T ss_pred CCCCHHHHHHHHHHHHHhCCC--CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCC
Confidence 457888999999999999998 99999999999999876543 345789999999999999999999999887654455
Q ss_pred ChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChH
Q 025118 151 PIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPS 229 (257)
Q Consensus 151 ~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~ 229 (257)
...+.++.+|+.+|.+++|.|+.+||..++ ...|..++..++..+ |..+|.+++|.|+|++|.+++...|.
T Consensus 87 ~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l----~~~~~~l~~~~~~~~----~~~~d~~~~g~i~~~ef~~~~~~~~~ 157 (158)
T PTZ00183 87 DPREEILKAFRLFDDDKTGKISLKNLKRVA----KELGETITDEELQEM----IDEADRNGDGEISEEEFYRIMKKTNL 157 (158)
T ss_pred CcHHHHHHHHHHhCCCCCCcCcHHHHHHHH----HHhCCCCCHHHHHHH----HHHhCCCCCCcCcHHHHHHHHhcccC
Confidence 667889999999999999999999999998 456888998886554 48899999999999999999998774
No 6
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=99.85 E-value=2.2e-20 Score=136.24 Aligned_cols=176 Identities=22% Similarity=0.457 Sum_probs=148.9
Q ss_pred CCCcCCCCChHhHHHHHHhCCCCHHHHHHHHHHHHhhhcccccCC---------CCCHHHHHHHHhcCCCCChHHHHHHH
Q 025118 53 PPVQKCRFDVGDLARLAAESRFSVNELEALSELYKNLSCSIIKDG---------LIHKEELQVALFQAPYGENLFLDRVF 123 (257)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G---------~i~~~ef~~~l~~~~~~~~~~~~~lf 123 (257)
|++++...+.+++..++..+.|++++|-+++..|..+.++..... .+..+.+. ....+..++.-++|.
T Consensus 1 MGNK~~vFT~eqLd~YQDCTFFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~---kMPELkenpfk~ri~ 77 (189)
T KOG0038|consen 1 MGNKQTVFTEEQLDEYQDCTFFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIE---KMPELKENPFKRRIC 77 (189)
T ss_pred CCCccceeeHHHHhhhcccccccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHh---hChhhhcChHHHHHH
Confidence 456777889999999999999999999999999999887432111 22333222 222355677889999
Q ss_pred HHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHH
Q 025118 124 DLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKT 203 (257)
Q Consensus 124 ~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~ 203 (257)
..|..+|.|.++|++|+.+++.++...+..-++..+|+.||-|+|++|...++...+.++ ....+++++++-+++.+
T Consensus 78 e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~l---Tr~eLs~eEv~~i~ekv 154 (189)
T KOG0038|consen 78 EVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSL---TRDELSDEEVELICEKV 154 (189)
T ss_pred HHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHH---hhccCCHHHHHHHHHHH
Confidence 999999999999999999999998777778889999999999999999999999999754 45679999999999999
Q ss_pred HHHcCCCCCCcccHHHHHHHHHhChHHHHhc
Q 025118 204 FADADIDKDGRINKEEWKEFAVRNPSLLKNM 234 (257)
Q Consensus 204 f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~ 234 (257)
..+.|.||||++++.||.+++.+.|+++..+
T Consensus 155 ieEAD~DgDgkl~~~eFe~~i~raPDFlsTF 185 (189)
T KOG0038|consen 155 IEEADLDGDGKLSFAEFEHVILRAPDFLSTF 185 (189)
T ss_pred HHHhcCCCCCcccHHHHHHHHHhCcchHhhh
Confidence 9999999999999999999999999998765
No 7
>PTZ00184 calmodulin; Provisional
Probab=99.85 E-value=1.6e-19 Score=138.15 Aligned_cols=144 Identities=24% Similarity=0.429 Sum_probs=123.8
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCC
Q 025118 73 RFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYG-ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAP 151 (257)
Q Consensus 73 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~ 151 (257)
.++..+++.+...|..+|.+ ++|.|+.++|..++...+.. ....+..+|..+|.+++|.|+|++|+.++........
T Consensus 4 ~~~~~~~~~~~~~F~~~D~~--~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~ 81 (149)
T PTZ00184 4 QLTEEQIAEFKEAFSLFDKD--GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTD 81 (149)
T ss_pred ccCHHHHHHHHHHHHHHcCC--CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCc
Confidence 46788899999999999998 99999999999988765433 3557899999999999999999999999887654455
Q ss_pred hHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 152 IEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 152 ~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
..+.++.+|+.||.+++|.|+.+||..++. ..|..++.++++.+ |..+|.+++|.|+|+||+.++..
T Consensus 82 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~----~~~~~~~~~~~~~~----~~~~d~~~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 82 SEEEIKEAFKVFDRDGNGFISAAELRHVMT----NLGEKLTDEEVDEM----IREADVDGDGQINYEEFVKMMMS 148 (149)
T ss_pred HHHHHHHHHHhhCCCCCCeEeHHHHHHHHH----HHCCCCCHHHHHHH----HHhcCCCCCCcCcHHHHHHHHhc
Confidence 667899999999999999999999999984 45788888776554 47899999999999999998764
No 8
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=9.1e-20 Score=135.32 Aligned_cols=146 Identities=27% Similarity=0.400 Sum_probs=129.9
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCC-hHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCC
Q 025118 72 SRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGE-NLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYA 150 (257)
Q Consensus 72 ~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~-~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~ 150 (257)
..++..+-+.++..|..+|++ ++|+|+.+||..+++.++... ..++.++...+|+++.|.|+|++|...+.......
T Consensus 25 ~~l~~~q~q~i~e~f~lfd~~--~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~ 102 (172)
T KOG0028|consen 25 SELTEEQKQEIKEAFELFDPD--MAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGER 102 (172)
T ss_pred ccccHHHHhhHHHHHHhhccC--CCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhcc
Confidence 345667778888889999988 999999999999998877664 45789999999999999999999999877665566
Q ss_pred ChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 151 PIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 151 ~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
.+.+++..+|+.+|.|++|.|+..+|+++. ...|+.++++++++|| ..+|.++||.|.-+||.++|+..
T Consensus 103 dt~eEi~~afrl~D~D~~Gkis~~~lkrva----keLgenltD~El~eMI----eEAd~d~dgevneeEF~~imk~t 171 (172)
T KOG0028|consen 103 DTKEEIKKAFRLFDDDKTGKISQRNLKRVA----KELGENLTDEELMEMI----EEADRDGDGEVNEEEFIRIMKKT 171 (172)
T ss_pred CcHHHHHHHHHcccccCCCCcCHHHHHHHH----HHhCccccHHHHHHHH----HHhcccccccccHHHHHHHHhcC
Confidence 689999999999999999999999999998 7889999999999999 78999999999999999998763
No 9
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.77 E-value=1.2e-17 Score=130.61 Aligned_cols=158 Identities=22% Similarity=0.321 Sum_probs=131.9
Q ss_pred HHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCC--CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHH
Q 025118 79 LEALSELYKNLSCSIIKDGLIHKEELQVALFQAP--YGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKI 156 (257)
Q Consensus 79 i~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~--~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~ 156 (257)
...+...|...|.+ ++|.|+.+|++.+|.... .-....++.++..||.+.+|.|+|.||..++..+ ..+
T Consensus 56 ~~~~~~~f~~vD~d--~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i-------~~W 126 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRD--RSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYI-------NQW 126 (221)
T ss_pred cHHHHHHHHhhCcc--ccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH-------HHH
Confidence 34566788899998 999999999999987322 2234579999999999999999999999999887 489
Q ss_pred HHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChHHHHhc-C
Q 025118 157 DFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNM-T 235 (257)
Q Consensus 157 ~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~-~ 235 (257)
+.+|+.||.|++|.|+..||+.++ ..+|..++++..+-++ +.+|..++|.|.+++|++++..-..+-+.+ -
T Consensus 127 r~vF~~~D~D~SG~I~~sEL~~Al----~~~Gy~Lspq~~~~lv----~kyd~~~~g~i~FD~FI~ccv~L~~lt~~Fr~ 198 (221)
T KOG0037|consen 127 RNVFRTYDRDRSGTIDSSELRQAL----TQLGYRLSPQFYNLLV----RKYDRFGGGRIDFDDFIQCCVVLQRLTEAFRR 198 (221)
T ss_pred HHHHHhcccCCCCcccHHHHHHHH----HHcCcCCCHHHHHHHH----HHhccccCCceeHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 6789999998766665 788987799999999999999887766655 4
Q ss_pred CCCccc--cccccCcceeec
Q 025118 236 LPYLTD--ITTIFPSFVFNT 253 (257)
Q Consensus 236 ~~~~~~--~~~~~~~~~~~~ 253 (257)
.++.++ ++-++..|+.+|
T Consensus 199 ~D~~q~G~i~~~y~dfl~~t 218 (221)
T KOG0037|consen 199 RDTAQQGSITISYDDFLQMT 218 (221)
T ss_pred hccccceeEEEeHHHHHHHh
Confidence 444444 666677887765
No 10
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.76 E-value=6.8e-17 Score=119.25 Aligned_cols=139 Identities=20% Similarity=0.329 Sum_probs=122.6
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCC-hHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCC
Q 025118 73 RFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGE-NLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAP 151 (257)
Q Consensus 73 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~-~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~ 151 (257)
.|+..+|+.++++|..+|.| ++|.|+.++++..+..++... +.++..++.. ..|.|+|.-|+.++........
T Consensus 25 mf~q~QIqEfKEAF~~mDqn--rDG~IdkeDL~d~~aSlGk~~~d~elDaM~~E----a~gPINft~FLTmfGekL~gtd 98 (171)
T KOG0031|consen 25 MFDQSQIQEFKEAFNLMDQN--RDGFIDKEDLRDMLASLGKIASDEELDAMMKE----APGPINFTVFLTMFGEKLNGTD 98 (171)
T ss_pred HhhHHHHHHHHHHHHHHhcc--CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhcCCC
Confidence 57889999999999999999 999999999999998866443 4456666654 6789999999999988777888
Q ss_pred hHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q 025118 152 IEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAV 225 (257)
Q Consensus 152 ~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~ 225 (257)
+++.+..+|+.||.+++|.|..+.|+.+| ...|..+++++|+.+. +.+-.+..|.|+|..|+.++.
T Consensus 99 pe~~I~~AF~~FD~~~~G~I~~d~lre~L----tt~gDr~~~eEV~~m~----r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 99 PEEVILNAFKTFDDEGSGKIDEDYLRELL----TTMGDRFTDEEVDEMY----REAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred HHHHHHHHHHhcCccCCCccCHHHHHHHH----HHhcccCCHHHHHHHH----HhCCcccCCceeHHHHHHHHH
Confidence 99999999999999999999999999999 5679999999976655 778888899999999999987
No 11
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.63 E-value=1.2e-14 Score=105.70 Aligned_cols=142 Identities=19% Similarity=0.276 Sum_probs=116.1
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCC-ChHHHHHHHHHHcCC--CCCcccHHHHHHHHHhhC--
Q 025118 73 RFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYG-ENLFLDRVFDLFDEK--KNGVIDFEEFVHALNVFH-- 147 (257)
Q Consensus 73 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~--~~g~I~f~ef~~~~~~~~-- 147 (257)
.+++++...++++|..+|.. ++|+|+..+...+|+.++.. ++..+.+....++.+ +-..|+|++|+-++..+.
T Consensus 4 ~~~~d~~~e~ke~F~lfD~~--gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vakn 81 (152)
T KOG0030|consen 4 AFTPDQMEEFKEAFLLFDRT--GDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKN 81 (152)
T ss_pred ccCcchHHHHHHHHHHHhcc--CcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhc
Confidence 45666778888899999988 99999999999999886643 455677777777766 346899999999988775
Q ss_pred CCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q 025118 148 PYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAV 225 (257)
Q Consensus 148 ~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~ 225 (257)
+.+...+..-...+.||++++|.|...||++++ ...|..+++++++.++. --.|.+|.|.|+.|++.+.
T Consensus 82 k~q~t~edfvegLrvFDkeg~G~i~~aeLRhvL----ttlGekl~eeEVe~Lla-----g~eD~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 82 KDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVL----TTLGEKLTEEEVEELLA-----GQEDSNGCINYEAFVKHIM 150 (152)
T ss_pred cccCcHHHHHHHHHhhcccCCcceeHHHHHHHH----HHHHhhccHHHHHHHHc-----cccccCCcCcHHHHHHHHh
Confidence 234456777779999999999999999999999 56799999999999873 3457789999999998764
No 12
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.61 E-value=1.9e-14 Score=122.11 Aligned_cols=140 Identities=23% Similarity=0.370 Sum_probs=120.7
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCC--ChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCC
Q 025118 74 FSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYG--ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAP 151 (257)
Q Consensus 74 ~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~--~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~ 151 (257)
.+++--.++...|+.+|.+ ++|.++..++...+..++.. .......+|+.+|.|.+|.++|.||...+...
T Consensus 8 ~~~er~~r~~~lf~~lD~~--~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~----- 80 (463)
T KOG0036|consen 8 TDEERDIRIRCLFKELDSK--NDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNK----- 80 (463)
T ss_pred CcHHHHHHHHHHHHHhccC--CCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHh-----
Confidence 3444556778888999988 99999999999888765544 34578899999999999999999999998654
Q ss_pred hHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChH
Q 025118 152 IEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPS 229 (257)
Q Consensus 152 ~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~ 229 (257)
+.++..+|+.+|.++||.|+.+|+.+.+ ..+|..+++++++.+ |+.+|.++.+.|+++||...+..+|.
T Consensus 81 -E~~l~~~F~~iD~~hdG~i~~~Ei~~~l----~~~gi~l~de~~~k~----~e~~d~~g~~~I~~~e~rd~~ll~p~ 149 (463)
T KOG0036|consen 81 -ELELYRIFQSIDLEHDGKIDPNEIWRYL----KDLGIQLSDEKAAKF----FEHMDKDGKATIDLEEWRDHLLLYPE 149 (463)
T ss_pred -HHHHHHHHhhhccccCCccCHHHHHHHH----HHhCCccCHHHHHHH----HHHhccCCCeeeccHHHHhhhhcCCh
Confidence 4789999999999999999999999999 677999999997664 48899999999999999999999883
No 13
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.56 E-value=7.8e-14 Score=109.35 Aligned_cols=156 Identities=21% Similarity=0.283 Sum_probs=128.1
Q ss_pred hhhHhhhhccCCCCCccccccchhhccc-cchhHHHHHHHHhhhccccCCCCcCCCCChHhHHHHHHhCCCCHHHHHHHH
Q 025118 5 ANRSFLRAFDYDGSSSLTFGERICAACI-PLIAIIEAVVITVASCFRYRPPVQKCRFDVGDLARLAAESRFSVNELEALS 83 (257)
Q Consensus 5 a~~~~f~~ld~~~~~rls~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~l~ 83 (257)
+.--+|...|+|.+|+|+.+|+..++-. ....+....+..+..++... ..+.+.+.|+..|-+ -|+.++
T Consensus 58 ~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~---~~G~i~f~EF~~Lw~-------~i~~Wr 127 (221)
T KOG0037|consen 58 QLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRD---NSGTIGFKEFKALWK-------YINQWR 127 (221)
T ss_pred HHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCC---CCCccCHHHHHHHHH-------HHHHHH
Confidence 3446899999999999999998777542 33344556666677777554 566799999988874 589999
Q ss_pred HHHHhhhcccccCCCCCHHHHHHHHhcCCCCChH-HHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHh
Q 025118 84 ELYKNLSCSIIKDGLIHKEELQVALFQAPYGENL-FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRL 162 (257)
Q Consensus 84 ~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~-~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~ 162 (257)
..|..+|+| ++|.|+..||+.+|..++...++ ..+.|++.||..+.|.|.|++|+.++..+ ..+-.+|+.
T Consensus 128 ~vF~~~D~D--~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L-------~~lt~~Fr~ 198 (221)
T KOG0037|consen 128 NVFRTYDRD--RSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVL-------QRLTEAFRR 198 (221)
T ss_pred HHHHhcccC--CCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHH-------HHHHHHHHH
Confidence 999999999 99999999999999998877654 68889999998889999999999999887 478899999
Q ss_pred hCCCCCCccc--HHHHHHH
Q 025118 163 YDLRQTGYIE--REEVKQM 179 (257)
Q Consensus 163 ~D~d~~G~I~--~~e~~~~ 179 (257)
+|.+..|.|+ .++|..+
T Consensus 199 ~D~~q~G~i~~~y~dfl~~ 217 (221)
T KOG0037|consen 199 RDTAQQGSITISYDDFLQM 217 (221)
T ss_pred hccccceeEEEeHHHHHHH
Confidence 9999999655 5566554
No 14
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.52 E-value=1.5e-13 Score=113.62 Aligned_cols=203 Identities=19% Similarity=0.187 Sum_probs=138.7
Q ss_pred hHhhhhccCCCCCccccccchhhccccchhHHHHHHHHhhhccccCCCCcCCCCChHhHHHHHHhCC------C------
Q 025118 7 RSFLRAFDYDGSSSLTFGERICAACIPLIAIIEAVVITVASCFRYRPPVQKCRFDVGDLARLAAESR------F------ 74 (257)
Q Consensus 7 ~~~f~~ld~~~~~rls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~------ 74 (257)
..++.++|.+.+|.+|..|. ...++.... .-+.............+..+.++++++....-... .
T Consensus 80 ~~l~~~iD~~~Dgfv~~~El-~~wi~~s~k--~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e~~~ 156 (325)
T KOG4223|consen 80 GKLVPKIDSDSDGFVTESEL-KAWIMQSQK--KYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEEDNE 156 (325)
T ss_pred HHHHhhhcCCCCCceeHHHH-HHHHHHHHH--HHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccchhcH
Confidence 45778999999999999994 443332211 11112222223333444777888888765432110 1
Q ss_pred -CHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCC--CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCC
Q 025118 75 -SVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAP--YGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAP 151 (257)
Q Consensus 75 -~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~--~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~ 151 (257)
-.+.+.+-.+.|+.-|.| ++|.++.+||..+|..-. .-....+...+.-.|+|+||.|+++||+.-+......+.
T Consensus 157 ~~~km~~rDe~rFk~AD~d--~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~ 234 (325)
T KOG4223|consen 157 EYKKMIARDEERFKAADQD--GDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEE 234 (325)
T ss_pred HHHHHHHHHHHHHhhcccC--CCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCC
Confidence 123566667789999999 999999999999886422 222345788889999999999999999988766542221
Q ss_pred hH----HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHH
Q 025118 152 IE----DKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKE 222 (257)
Q Consensus 152 ~~----~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~ 222 (257)
-. .+-...+..+|+|+||+++.+|++.-+ .-.+......+.. .++...|.|+||++|++|.+.
T Consensus 235 epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI----~P~~~d~A~~EA~----hL~~eaD~dkD~kLs~eEIl~ 301 (325)
T KOG4223|consen 235 EPEWVLTEREQFFEFRDKNKDGKLDGDELLDWI----LPSEQDHAKAEAR----HLLHEADEDKDGKLSKEEILE 301 (325)
T ss_pred CcccccccHHHHHHHhhcCCCCccCHHHHhccc----CCCCccHHHHHHH----HHhhhhccCccccccHHHHhh
Confidence 11 223467888999999999999999877 2233444444544 444889999999999999764
No 15
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.51 E-value=2e-13 Score=104.94 Aligned_cols=133 Identities=22% Similarity=0.258 Sum_probs=104.3
Q ss_pred hhhHhhhhccCCCCCccccccchhhccccchhHHHHHHHHhhhccccCCCCcCCCCChHhHHHHHHhCCCCHHHHHHHHH
Q 025118 5 ANRSFLRAFDYDGSSSLTFGERICAACIPLIAIIEAVVITVASCFRYRPPVQKCRFDVGDLARLAAESRFSVNELEALSE 84 (257)
Q Consensus 5 a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~l~~ 84 (257)
.-+.+|+++|.|++|.++..|+.... .... ...+..++ ..
T Consensus 9 el~~~F~~fD~d~~G~i~~~el~~~l---------------r~lg----------------------~~~t~~el---~~ 48 (151)
T KOG0027|consen 9 ELKEAFQLFDKDGDGKISVEELGAVL---------------RSLG----------------------QNPTEEEL---RD 48 (151)
T ss_pred HHHHHHHHHCCCCCCcccHHHHHHHH---------------HHcC----------------------CCCCHHHH---HH
Confidence 35678899999999999999853321 1100 11334444 45
Q ss_pred HHHhhhcccccCCCCCHHHHHHHHhcCCCC------ChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHH
Q 025118 85 LYKNLSCSIIKDGLIHKEELQVALFQAPYG------ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDF 158 (257)
Q Consensus 85 ~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~------~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~ 158 (257)
++...|.+ ++|.|+..+|..++...... ....+..+|+.||.|++|+|+..|+..++..+. .....+.+..
T Consensus 49 ~~~~~D~d--g~g~I~~~eF~~l~~~~~~~~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg-~~~~~~e~~~ 125 (151)
T KOG0027|consen 49 LIKEIDLD--GDGTIDFEEFLDLMEKLGEEKTDEEASSEELKEAFRVFDKDGDGFISASELKKVLTSLG-EKLTDEECKE 125 (151)
T ss_pred HHHHhCCC--CCCeEcHHHHHHHHHhhhcccccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhC-CcCCHHHHHH
Confidence 56677777 99999999999988763322 123789999999999999999999999999987 5666889999
Q ss_pred HHHhhCCCCCCcccHHHHHHHH
Q 025118 159 AFRLYDLRQTGYIEREEVKQMV 180 (257)
Q Consensus 159 ~F~~~D~d~~G~I~~~e~~~~l 180 (257)
+++.+|.|++|.|++++|..++
T Consensus 126 mi~~~d~d~dg~i~f~ef~~~m 147 (151)
T KOG0027|consen 126 MIREVDVDGDGKVNFEEFVKMM 147 (151)
T ss_pred HHHhcCCCCCCeEeHHHHHHHH
Confidence 9999999999999999999987
No 16
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.46 E-value=3.6e-13 Score=88.60 Aligned_cols=66 Identities=30% Similarity=0.586 Sum_probs=60.3
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHH
Q 025118 155 KIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFA 224 (257)
Q Consensus 155 ~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l 224 (257)
+++.+|+.+|.|++|+|+.+||..++ ...+...+..++++++..+|+.+|.|+||.|+++||++++
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~----~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRAL----KHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHH----HHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHH----HHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 47899999999999999999999999 4567777788899999999999999999999999999875
No 17
>PLN02964 phosphatidylserine decarboxylase
Probab=99.44 E-value=2e-12 Score=118.57 Aligned_cols=119 Identities=19% Similarity=0.303 Sum_probs=101.5
Q ss_pred CCCCChHhHHHHHHh--CCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCC--CChH---HHHHHHHHHcCC
Q 025118 57 KCRFDVGDLARLAAE--SRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPY--GENL---FLDRVFDLFDEK 129 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~--~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~--~~~~---~~~~lf~~~d~~ 129 (257)
..++++..+..+... +.|+.++++.+++.|+.+|+| ++|.+ +..++..++. .... .++.+|+.+|.+
T Consensus 118 ~~~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~d--gdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~D 191 (644)
T PLN02964 118 TNRLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPS--SSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYD 191 (644)
T ss_pred cCCCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCC--CCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCC
Confidence 456888888888877 889999999999999999999 99997 5555555542 2222 379999999999
Q ss_pred CCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHH
Q 025118 130 KNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAA 182 (257)
Q Consensus 130 ~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~ 182 (257)
++|.|+|+||+.++..+. ....+++++.+|+.||.|++|+|+.+||.+++..
T Consensus 192 gdG~IdfdEFl~lL~~lg-~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 192 EDGQLSFSEFSDLIKAFG-NLVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred CCCeEcHHHHHHHHHHhc-cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 999999999999998765 5577889999999999999999999999999864
No 18
>PTZ00183 centrin; Provisional
Probab=99.40 E-value=1.3e-11 Score=95.30 Aligned_cols=123 Identities=15% Similarity=0.177 Sum_probs=91.8
Q ss_pred CCCcCCCCChHhHHHHHHhCC--CCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcC--CCCChHHHHHHHHHHcC
Q 025118 53 PPVQKCRFDVGDLARLAAESR--FSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQA--PYGENLFLDRVFDLFDE 128 (257)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~--~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~--~~~~~~~~~~lf~~~d~ 128 (257)
+.++.+.++..++..+..... .+..++ ..+|..+|.+ ++|.|+..+|..++... .......+..+|..+|.
T Consensus 27 D~~~~G~i~~~e~~~~l~~~g~~~~~~~~---~~l~~~~d~~--~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~ 101 (158)
T PTZ00183 27 DTDGSGTIDPKELKVAMRSLGFEPKKEEI---KQMIADVDKD--GSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDD 101 (158)
T ss_pred CCCCCCcccHHHHHHHHHHhCCCCCHHHH---HHHHHHhCCC--CCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCC
Confidence 333444555555554444322 344444 4556666776 99999999999876542 22334568899999999
Q ss_pred CCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q 025118 129 KKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 129 ~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~ 181 (257)
+++|.|+.+||..++.... .......+..+|..+|.+++|.|++++|..++.
T Consensus 102 ~~~G~i~~~e~~~~l~~~~-~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 153 (158)
T PTZ00183 102 DKTGKISLKNLKRVAKELG-ETITDEELQEMIDEADRNGDGEISEEEFYRIMK 153 (158)
T ss_pred CCCCcCcHHHHHHHHHHhC-CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 9999999999999998765 456778899999999999999999999999873
No 19
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.39 E-value=2e-11 Score=92.96 Aligned_cols=121 Identities=19% Similarity=0.244 Sum_probs=95.6
Q ss_pred CCcCCCCChHhHHHHHHh--CCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCC--CCChHHHHHHHHHHcCC
Q 025118 54 PVQKCRFDVGDLARLAAE--SRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAP--YGENLFLDRVFDLFDEK 129 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~--~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~--~~~~~~~~~lf~~~d~~ 129 (257)
.++.+.++..++..+.+. ...+..++.++...++. ++|.|+..+|..++.... ......+...|+.||.|
T Consensus 31 ~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~------~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d 104 (160)
T COG5126 31 RDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA------GNETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKD 104 (160)
T ss_pred cCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC------CCCccCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCC
Confidence 334455555555555543 33466777766665544 578999999999987632 33456899999999999
Q ss_pred CCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q 025118 130 KNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 130 ~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~ 181 (257)
++|+|+..++..++..+. ...+.+++..+++.+|.|++|.|++++|.+.+.
T Consensus 105 ~dG~Is~~eL~~vl~~lg-e~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~ 155 (160)
T COG5126 105 HDGYISIGELRRVLKSLG-ERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIK 155 (160)
T ss_pred CCceecHHHHHHHHHhhc-ccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHh
Confidence 999999999999999876 778889999999999999999999999999873
No 20
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.33 E-value=3.1e-11 Score=95.00 Aligned_cols=124 Identities=20% Similarity=0.239 Sum_probs=99.6
Q ss_pred cCCCCChHhHHHHHHhCCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCC-hHHHHHHHHHHcCCCCCcc
Q 025118 56 QKCRFDVGDLARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGE-NLFLDRVFDLFDEKKNGVI 134 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~-~~~~~~lf~~~d~~~~g~I 134 (257)
..+.++.+++..+.+...-....-.....+|..+|.| ++|.|++.||..+|.....+. ...+...|+.||.|++|.|
T Consensus 40 P~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~--~dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~I 117 (193)
T KOG0044|consen 40 PSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKN--KDGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYI 117 (193)
T ss_pred CCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhccc--CCCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceE
Confidence 5667888888888876544445555666788888888 999999999998887644443 4456778999999999999
Q ss_pred cHHHHHHHHHhhC----------CCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q 025118 135 DFEEFVHALNVFH----------PYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 135 ~f~ef~~~~~~~~----------~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~ 181 (257)
+++|++.++.... ....+++.+..+|+.+|.|+||.||.+||...+.
T Consensus 118 t~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~ 174 (193)
T KOG0044|consen 118 TKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCK 174 (193)
T ss_pred cHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhh
Confidence 9999998876652 1233678899999999999999999999999874
No 21
>PTZ00184 calmodulin; Provisional
Probab=99.28 E-value=1.6e-10 Score=88.13 Aligned_cols=96 Identities=21% Similarity=0.337 Sum_probs=79.0
Q ss_pred HHHHHHhhhcccccCCCCCHHHHHHHHhcC-C-CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHH
Q 025118 82 LSELYKNLSCSIIKDGLIHKEELQVALFQA-P-YGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFA 159 (257)
Q Consensus 82 l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~-~-~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~ 159 (257)
+..+|..+|.+ ++|.|+.++|..++... . ......+..+|..+|.+++|.|+.++|..++.... .....+.++.+
T Consensus 49 ~~~~~~~~d~~--~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~ 125 (149)
T PTZ00184 49 LQDMINEVDAD--GNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLG-EKLTDEEVDEM 125 (149)
T ss_pred HHHHHHhcCcC--CCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHC-CCCCHHHHHHH
Confidence 34556666766 99999999999887642 1 12234678899999999999999999999988764 45677889999
Q ss_pred HHhhCCCCCCcccHHHHHHHH
Q 025118 160 FRLYDLRQTGYIEREEVKQMV 180 (257)
Q Consensus 160 F~~~D~d~~G~I~~~e~~~~l 180 (257)
|+.+|.+++|.|+.+||..++
T Consensus 126 ~~~~d~~~~g~i~~~ef~~~~ 146 (149)
T PTZ00184 126 IREADVDGDGQINYEEFVKMM 146 (149)
T ss_pred HHhcCCCCCCcCcHHHHHHHH
Confidence 999999999999999999876
No 22
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=99.24 E-value=1.3e-10 Score=100.33 Aligned_cols=188 Identities=18% Similarity=0.244 Sum_probs=138.4
Q ss_pred hhhHhhhhccCCCCCccccccchhhccccchhHHHHHHHHhhhccccCCCCcCCCCChHhHHHHHHhCCCCHHHHHHHHH
Q 025118 5 ANRSFLRAFDYDGSSSLTFGERICAACIPLIAIIEAVVITVASCFRYRPPVQKCRFDVGDLARLAAESRFSVNELEALSE 84 (257)
Q Consensus 5 a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~l~~ 84 (257)
|-+.+|=.+++..+||+|.++.+....+. + +.-+...-. +. .....|+-.....++-
T Consensus 226 vi~rIFy~~nrs~tG~iti~el~~snll~------~----l~~l~eEed-----------~n--q~~~~FS~e~f~viy~ 282 (493)
T KOG2562|consen 226 VIQRIFYYLNRSRTGRITIQELLRSNLLD------A----LLELDEEED-----------IN--QVTRYFSYEHFYVIYC 282 (493)
T ss_pred HhhhhheeeCCccCCceeHHHHHHhHHHH------H----HHHHHHHhh-----------hh--hhhhheeHHHHHHHHH
Confidence 34567888999999999999964442222 1 222111110 11 1224567788888899
Q ss_pred HHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHH----HcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHH
Q 025118 85 LYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDL----FDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAF 160 (257)
Q Consensus 85 ~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~----~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F 160 (257)
.|..+|+| ++|.|+.+++...-. +....-.+++||.. +-...+|.++|++|+-.+-+.. ......-++..|
T Consensus 283 kFweLD~D--hd~lidk~~L~ry~d--~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e-~k~t~~SleYwF 357 (493)
T KOG2562|consen 283 KFWELDTD--HDGLIDKEDLKRYGD--HTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEE-DKDTPASLEYWF 357 (493)
T ss_pred HHhhhccc--cccccCHHHHHHHhc--cchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhc-cCCCccchhhhe
Confidence 99999999 999999999987532 23335678999993 3345689999999999988886 666778899999
Q ss_pred HhhCCCCCCcccHHHHHHHHHHHHHhh---c-CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHH
Q 025118 161 RLYDLRQTGYIEREEVKQMVAAILMES---E-IKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEF 223 (257)
Q Consensus 161 ~~~D~d~~G~I~~~e~~~~l~~~~~~~---g-~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~ 223 (257)
+.+|.+++|.|+..|+.-+....++.+ | ..++ ++.++..++..+-+...|+|+.++|...
T Consensus 358 rclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~---fed~l~qi~DMvkP~~~~kItLqDlk~s 421 (493)
T KOG2562|consen 358 RCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALP---FEDALCQIRDMVKPEDENKITLQDLKGS 421 (493)
T ss_pred eeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCccc---HHHHHHHHHHHhCccCCCceeHHHHhhc
Confidence 999999999999999999988765443 2 3334 3455666777778777899999999983
No 23
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.24 E-value=3.6e-11 Score=83.32 Aligned_cols=67 Identities=16% Similarity=0.253 Sum_probs=57.1
Q ss_pred HHHHHHHHhhCC-CCCCcccHHHHHHHHHHHHHhhcCCCCH-HHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 154 DKIDFAFRLYDL-RQTGYIEREEVKQMVAAILMESEIKLPD-DLLEAIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 154 ~~~~~~F~~~D~-d~~G~I~~~e~~~~l~~~~~~~g~~~s~-~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
..+..+|+.||. +++|+|+.+||+.++.. +.|..+++ +++++++ +.+|.|+||.|+|+||+.++..-
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~---elg~~ls~~~~v~~mi----~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQ---QLPHLLKDVEGLEEKM----KNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHH---HhhhhccCHHHHHHHH----HHhCCCCCCCCcHHHHHHHHHHH
Confidence 467899999999 99999999999999952 25666777 6766655 88999999999999999998764
No 24
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=99.23 E-value=1.2e-10 Score=99.85 Aligned_cols=140 Identities=14% Similarity=0.200 Sum_probs=105.0
Q ss_pred HHHHHHHHhhhcccccCCCCCHHHHHHHHhc-CCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCC---------
Q 025118 80 EALSELYKNLSCSIIKDGLIHKEELQVALFQ-APYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPY--------- 149 (257)
Q Consensus 80 ~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~-~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~--------- 149 (257)
.++.+.|.+.|.+ .+|+|+...+..++.. .+++.+ +...-=+....+.+|.|.|.+-+..+..-...
T Consensus 464 sdL~~eF~~~D~~--ksG~lsis~Wa~~mE~i~~L~LP-Wr~L~~kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slve 540 (631)
T KOG0377|consen 464 SDLEDEFRKYDPK--KSGKLSISHWAKCMENITGLNLP-WRLLRPKLANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVE 540 (631)
T ss_pred hHHHHHHHhcChh--hcCeeeHHHHHHHHHHHhcCCCc-HHHhhhhccCCCcCcceehHhHHHHhhhhhHHHHHHhHHHH
Confidence 3556679999988 9999999999988765 233322 22222234455677889888776654432100
Q ss_pred --CChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 150 --APIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 150 --~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
-.....+..+|+.+|.|++|.|+.+||+.+++-+....+..+++.++-++. +.+|.|+||.|++.||+++++.
T Consensus 541 tLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la----~~mD~NkDG~IDlNEfLeAFrl 615 (631)
T KOG0377|consen 541 TLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELA----RSMDLNKDGKIDLNEFLEAFRL 615 (631)
T ss_pred HHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHH----HhhccCCCCcccHHHHHHHHhh
Confidence 011234788999999999999999999999987777788899999877777 7899999999999999999875
No 25
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=99.21 E-value=9e-11 Score=100.66 Aligned_cols=204 Identities=17% Similarity=0.290 Sum_probs=141.9
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccc----------------cchhHHHHHHHHhhhccccCCCCcCCCCChHhH
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACI----------------PLIAIIEAVVITVASCFRYRPPVQKCRFDVGDL 65 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (257)
+.++=+.-|+|+|.|++|-|+-+|+.....+ +.......+..++...+.... ....++.+++
T Consensus 231 p~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~r--g~~kLs~deF 308 (489)
T KOG2643|consen 231 PERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKR--GNGKLSIDEF 308 (489)
T ss_pred CcccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccC--CCccccHHHH
Confidence 3455567799999999999999995443312 222333444455555555554 5668899999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCC-CCC---hHHHHHHHHHHcCCCCCcccHHHHHH
Q 025118 66 ARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAP-YGE---NLFLDRVFDLFDEKKNGVIDFEEFVH 141 (257)
Q Consensus 66 ~~~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~-~~~---~~~~~~lf~~~d~~~~g~I~f~ef~~ 141 (257)
.++++.- +.+-+.--|..+|+. .+|.|+..+|...|.... ... ...+.++-..++.+ +-.|++.||..
T Consensus 309 ~~F~e~L-----q~Eil~lEF~~~~~~--~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~-~~gISl~Ef~~ 380 (489)
T KOG2643|consen 309 LKFQENL-----QEEILELEFERFDKG--DSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDD-GKGISLQEFKA 380 (489)
T ss_pred HHHHHHH-----HHHHHHHHHHHhCcc--cccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCC-CCCcCHHHHHH
Confidence 9888632 233344457788876 779999999988765422 221 23567777778776 44699999999
Q ss_pred HHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHH
Q 025118 142 ALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWK 221 (257)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~ 221 (257)
.+..+... .....|...|- .-.+.|+..+|+++.. ...|.++++.. ++-+|..+|.|+||.++++||+
T Consensus 381 Ff~Fl~~l----~dfd~Al~fy~-~Ag~~i~~~~f~raa~---~vtGveLSdhV----vdvvF~IFD~N~Dg~LS~~EFl 448 (489)
T KOG2643|consen 381 FFRFLNNL----NDFDIALRFYH-MAGASIDEKTFQRAAK---VVTGVELSDHV----VDVVFTIFDENNDGTLSHKEFL 448 (489)
T ss_pred HHHHHhhh----hHHHHHHHHHH-HcCCCCCHHHHHHHHH---HhcCcccccce----eeeEEEEEccCCCCcccHHHHH
Confidence 88766422 33444444442 3457899999999986 55789999764 5667789999999999999999
Q ss_pred HHHHhC
Q 025118 222 EFAVRN 227 (257)
Q Consensus 222 ~~l~~~ 227 (257)
.+|++.
T Consensus 449 ~Vmk~R 454 (489)
T KOG2643|consen 449 AVMKRR 454 (489)
T ss_pred HHHHHH
Confidence 999764
No 26
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.19 E-value=1.1e-10 Score=96.88 Aligned_cols=142 Identities=22% Similarity=0.297 Sum_probs=106.5
Q ss_pred HHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcC-CCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhC-------CC
Q 025118 78 ELEALSELYKNLSCSIIKDGLIHKEELQVALFQA-PYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFH-------PY 149 (257)
Q Consensus 78 ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~-~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~-------~~ 149 (257)
.-.++...+.++|.+ ++|.|+..|+...+... .........+-+..+|.|.+|.|+|++++....... ..
T Consensus 75 ~~~rl~~l~~~iD~~--~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~ 152 (325)
T KOG4223|consen 75 SQERLGKLVPKIDSD--SDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDE 152 (325)
T ss_pred hHHHHHHHHhhhcCC--CCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccc
Confidence 456778888999988 99999999999866432 122234567788999999999999999998876421 00
Q ss_pred C------ChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHH
Q 025118 150 A------PIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEF 223 (257)
Q Consensus 150 ~------~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~ 223 (257)
. ...-+-+.-|+.-|.|++|.++.+||..+++ .+-.+.+. .-++......+|.||||.|+++||+.-
T Consensus 153 e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLH---PEe~p~M~----~iVi~Etl~d~Dkn~DG~I~~eEfigd 225 (325)
T KOG4223|consen 153 EDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLH---PEEHPHMK----DIVIAETLEDIDKNGDGKISLEEFIGD 225 (325)
T ss_pred hhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccC---hhhcchHH----HHHHHHHHhhcccCCCCceeHHHHHhH
Confidence 0 1112346789999999999999999999984 22223333 334555668899999999999999998
Q ss_pred HHhCh
Q 025118 224 AVRNP 228 (257)
Q Consensus 224 l~~~~ 228 (257)
|..++
T Consensus 226 ~~~~~ 230 (325)
T KOG4223|consen 226 LYSHE 230 (325)
T ss_pred Hhhcc
Confidence 88775
No 27
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=99.13 E-value=3.3e-10 Score=78.56 Aligned_cols=69 Identities=17% Similarity=0.268 Sum_probs=56.9
Q ss_pred HHHHHHHHhhC-CCCCC-cccHHHHHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 154 DKIDFAFRLYD-LRQTG-YIEREEVKQMVAAILM-ESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 154 ~~~~~~F~~~D-~d~~G-~I~~~e~~~~l~~~~~-~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
..++.+|+.|| .+|+| +|+.+||+.+++.=+. ..|...+++++++++ +.+|.|++|.|+|+||+.++..
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i----~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVM----ETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHH----HHhCCCCCCcCcHHHHHHHHHH
Confidence 46889999998 79999 5999999999954111 157778888877766 7889999999999999998765
No 28
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.12 E-value=1.4e-09 Score=81.40 Aligned_cols=102 Identities=25% Similarity=0.365 Sum_probs=88.1
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHH
Q 025118 118 FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLE 197 (257)
Q Consensus 118 ~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~ 197 (257)
.++..|..||.+++|.|+++|+..++..+. .....+++..+..-+|++|.|.|++++|++++. ...|..-+.++
T Consensus 34 ~i~e~f~lfd~~~~g~iD~~EL~vAmralG-FE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt---~k~~e~dt~eE-- 107 (172)
T KOG0028|consen 34 EIKEAFELFDPDMAGKIDVEELKVAMRALG-FEPKKEEILKLLADVDKEGSGKITFEDFRRVMT---VKLGERDTKEE-- 107 (172)
T ss_pred hHHHHHHhhccCCCCcccHHHHHHHHHHcC-CCcchHHHHHHHHhhhhccCceechHHHHHHHH---HHHhccCcHHH--
Confidence 578899999999999999999988877776 677788999999999999999999999999986 34555557777
Q ss_pred HHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 198 AIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 198 ~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
+..+|+.+|.+++|.|++.+|..++..-
T Consensus 108 --i~~afrl~D~D~~Gkis~~~lkrvakeL 135 (172)
T KOG0028|consen 108 --IKKAFRLFDDDKTGKISQRNLKRVAKEL 135 (172)
T ss_pred --HHHHHHcccccCCCCcCHHHHHHHHHHh
Confidence 5567799999999999999999998764
No 29
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=99.06 E-value=1.1e-09 Score=76.92 Aligned_cols=70 Identities=19% Similarity=0.232 Sum_probs=54.3
Q ss_pred HHHHHHHHhhC-CCCCC-cccHHHHHHHHHHHH-HhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 154 DKIDFAFRLYD-LRQTG-YIEREEVKQMVAAIL-MESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 154 ~~~~~~F~~~D-~d~~G-~I~~~e~~~~l~~~~-~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
..+..+|..|| .||+| +|+.+||+.++...+ ...+...++.++++++ +.+|.|+||.|+|+||+.++..-
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~----~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIM----NDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHH----HHhCCCCCCCCCHHHHHHHHHHH
Confidence 45778999999 78998 599999999996422 1123334666655555 88999999999999999998764
No 30
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.06 E-value=3e-09 Score=83.69 Aligned_cols=119 Identities=18% Similarity=0.158 Sum_probs=89.1
Q ss_pred cCCCCChHhHHHHHHhCCCCHHHHHHHHHHHHhhhcccccCCC-CCHHHHHHHHhcCCCC-Ch-HHHHHHHHHHcCCCCC
Q 025118 56 QKCRFDVGDLARLAAESRFSVNELEALSELYKNLSCSIIKDGL-IHKEELQVALFQAPYG-EN-LFLDRVFDLFDEKKNG 132 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~-i~~~ef~~~l~~~~~~-~~-~~~~~lf~~~d~~~~g 132 (257)
..+.++.+++..+... ....-..++.+.|. ++ ++|. |++++|...+...... .. ..++-.|+.||.+++|
T Consensus 47 ~~g~lt~eef~~i~~~--~~Np~~~rI~~~f~---~~--~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G 119 (187)
T KOG0034|consen 47 GDGYLTKEEFLSIPEL--ALNPLADRIIDRFD---TD--GNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDG 119 (187)
T ss_pred ccCccCHHHHHHHHHH--hcCcHHHHHHHHHh---cc--CCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCC
Confidence 6778888888877621 11223444455554 44 6776 9999999988764333 22 3677899999999999
Q ss_pred cccHHHHHHHHHhhCCCCCh------HHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q 025118 133 VIDFEEFVHALNVFHPYAPI------EDKIDFAFRLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 133 ~I~f~ef~~~~~~~~~~~~~------~~~~~~~F~~~D~d~~G~I~~~e~~~~l~ 181 (257)
.|+.+|+..++..+-..... .+-+...|..+|.|+||.|+++||.+++.
T Consensus 120 ~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~ 174 (187)
T KOG0034|consen 120 FISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVE 174 (187)
T ss_pred cCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 99999999998887632222 34567899999999999999999999984
No 31
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=99.05 E-value=1.4e-09 Score=76.62 Aligned_cols=75 Identities=19% Similarity=0.281 Sum_probs=59.8
Q ss_pred HHHHHHHHhhCC-CC-CCcccHHHHHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChHH
Q 025118 154 DKIDFAFRLYDL-RQ-TGYIEREEVKQMVAAILM-ESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSL 230 (257)
Q Consensus 154 ~~~~~~F~~~D~-d~-~G~I~~~e~~~~l~~~~~-~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~~ 230 (257)
..++.+|..||. || +|.|+.+||+.++.+.+. ..|...+.++++.++ +.+|.+++|.|+|+||+.++....-+
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~----~~~D~~~dg~I~f~eF~~l~~~~~~~ 83 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIM----KDLDQNRDGKVNFEEFVSLVAGLSIA 83 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHH----HHhCCCCCCcCcHHHHHHHHHHHHHH
Confidence 568899999997 97 699999999999965222 246677887766655 78899999999999999998875444
Q ss_pred HH
Q 025118 231 LK 232 (257)
Q Consensus 231 ~~ 232 (257)
++
T Consensus 84 ~~ 85 (94)
T cd05031 84 CE 85 (94)
T ss_pred HH
Confidence 43
No 32
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=99.02 E-value=2.6e-09 Score=74.95 Aligned_cols=76 Identities=14% Similarity=0.215 Sum_probs=59.6
Q ss_pred HHHHHHHHhhC-CCCCC-cccHHHHHHHHHHHH-HhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChHH
Q 025118 154 DKIDFAFRLYD-LRQTG-YIEREEVKQMVAAIL-MESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSL 230 (257)
Q Consensus 154 ~~~~~~F~~~D-~d~~G-~I~~~e~~~~l~~~~-~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~~ 230 (257)
+.++.+|+.|| .+++| .|+.+||+.++++.+ ...+...+.+++++++ +.+|.+++|.|+|++|+.++......
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~----~~~D~d~~G~I~f~eF~~l~~~~~~~ 84 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIM----KELDENGDGEVDFQEFVVLVAALTVA 84 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHH----HHHCCCCCCcCcHHHHHHHHHHHHHH
Confidence 67899999997 99999 499999999996421 1134455777765555 78999999999999999999876555
Q ss_pred HHh
Q 025118 231 LKN 233 (257)
Q Consensus 231 ~~~ 233 (257)
++.
T Consensus 85 ~~~ 87 (92)
T cd05025 85 CNN 87 (92)
T ss_pred HHH
Confidence 543
No 33
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.98 E-value=3e-09 Score=73.79 Aligned_cols=69 Identities=20% Similarity=0.301 Sum_probs=57.2
Q ss_pred HHHHHHHHhhCC-CC-CCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 154 DKIDFAFRLYDL-RQ-TGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 154 ~~~~~~F~~~D~-d~-~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
..+-.+|..||. +| +|+|+.+||+.++... ...|..++++++++++ +.+|.|++|.|+|+||+.++..-
T Consensus 10 ~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~-~~lg~k~t~~ev~~m~----~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 10 GLLVAIFHKYSGREGDKNTLSKKELKELIQKE-LTIGSKLQDAEIAKLM----EDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHH-HhcCCCCCHHHHHHHH----HHhcCCCCCCCcHHHHHHHHHHH
Confidence 346789999998 77 8999999999999531 1258889999877766 78899999999999999998763
No 34
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.98 E-value=1.4e-09 Score=71.37 Aligned_cols=60 Identities=28% Similarity=0.407 Sum_probs=32.9
Q ss_pred HHHHHHHcCCCCCcccHHHHHHHHHhhCCC---CChHHHHHHHHHhhCCCCCCcccHHHHHHH
Q 025118 120 DRVFDLFDEKKNGVIDFEEFVHALNVFHPY---APIEDKIDFAFRLYDLRQTGYIEREEVKQM 179 (257)
Q Consensus 120 ~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~---~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~ 179 (257)
+.+|+.+|.|++|.|+.+||..++..+... ....+.+..+|+.+|.|++|.|+++||..+
T Consensus 3 ~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~ 65 (66)
T PF13499_consen 3 KEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNF 65 (66)
T ss_dssp HHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHH
T ss_pred HHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhcc
Confidence 455666666666666666666655554311 112234445566666666666666666554
No 35
>PLN02964 phosphatidylserine decarboxylase
Probab=98.94 E-value=1.1e-08 Score=94.20 Aligned_cols=119 Identities=15% Similarity=0.153 Sum_probs=85.0
Q ss_pred CCCCHHHHHHHHhc----CCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHH---HHHHHHhhCCCCCC
Q 025118 97 GLIHKEELQVALFQ----APYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDK---IDFAFRLYDLRQTG 169 (257)
Q Consensus 97 G~i~~~ef~~~l~~----~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~---~~~~F~~~D~d~~G 169 (257)
..++.+++...... ........+.+.|..+|.|++|.+ +..++..+......+++ ++.+|+.+|.|++|
T Consensus 119 ~~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG 194 (644)
T PLN02964 119 NRLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDG 194 (644)
T ss_pred CCCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCC
Confidence 34666666543211 111122457888999999999997 33334433211233333 89999999999999
Q ss_pred cccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 170 YIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 170 ~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
.|+++||..++. ..+...++++ +..+|+.+|.|++|.|+++||.+++...
T Consensus 195 ~IdfdEFl~lL~----~lg~~~seEE----L~eaFk~fDkDgdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 195 QLSFSEFSDLIK----AFGNLVAANK----KEELFKAADLNGDGVVTIDELAALLALQ 244 (644)
T ss_pred eEcHHHHHHHHH----HhccCCCHHH----HHHHHHHhCCCCCCcCCHHHHHHHHHhc
Confidence 999999999995 3455566665 5667799999999999999999999885
No 36
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.90 E-value=7e-09 Score=71.89 Aligned_cols=68 Identities=21% Similarity=0.279 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHhhhc-ccccCCCCCHHHHHHHHhc-CCCC-Ch-HHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 025118 77 NELEALSELYKNLSC-SIIKDGLIHKEELQVALFQ-APYG-EN-LFLDRVFDLFDEKKNGVIDFEEFVHALNVF 146 (257)
Q Consensus 77 ~ei~~l~~~F~~~d~-~~~~~G~i~~~ef~~~l~~-~~~~-~~-~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 146 (257)
..+..+..+|..+|. + ++|+|+..||+.++.. ++.. .. ..++.+++.+|.|++|.|+|+||+.++..+
T Consensus 5 ~ai~~l~~~F~~fd~~~--~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 5 KAIETLVSNFHKASVKG--GKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHHHHhCCC--CCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 457778888888888 7 8899999999988876 5532 23 678888999999999999999998877654
No 37
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.87 E-value=1.8e-08 Score=70.08 Aligned_cols=71 Identities=18% Similarity=0.330 Sum_probs=55.4
Q ss_pred HHHHHHHHhhCC--CCCCcccHHHHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCh
Q 025118 154 DKIDFAFRLYDL--RQTGYIEREEVKQMVAAILME-SEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNP 228 (257)
Q Consensus 154 ~~~~~~F~~~D~--d~~G~I~~~e~~~~l~~~~~~-~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~ 228 (257)
+.++.+|..||. +++|.|+.+||..+++..+.. .+...+..+++.++ ..+|.+++|.|+|++|+.++....
T Consensus 8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~----~~~d~~~~g~I~f~eF~~~~~~~~ 81 (88)
T cd00213 8 ETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIM----KDLDVNKDGKVDFQEFLVLIGKLA 81 (88)
T ss_pred HHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHH----HHhccCCCCcCcHHHHHHHHHHHH
Confidence 568889999999 899999999999999642111 12334566655554 788999999999999999988653
No 38
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.87 E-value=1.6e-08 Score=71.48 Aligned_cols=69 Identities=19% Similarity=0.436 Sum_probs=38.5
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 025118 74 FSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNV 145 (257)
Q Consensus 74 ~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~ 145 (257)
++..++..+.+.|..+|.+ ++|.|+.+++..++...+. ....+..++..+|.+++|.|+|+||+.++..
T Consensus 4 ls~~~~~~l~~~F~~~D~d--~~G~Is~~el~~~l~~~~~-~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 4 ISPEDKAKYEQIFRSLDKN--QDGTVTGAQAKPILLKSGL-PQTLLAKIWNLADIDNDGELDKDEFALAMHL 72 (96)
T ss_pred CCHHHHHHHHHHHHHhCCC--CCCeEeHHHHHHHHHHcCC-CHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 4555666666666666665 6666666666666554322 2334555555555555555555555555443
No 39
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=98.86 E-value=2.3e-08 Score=79.94 Aligned_cols=210 Identities=16% Similarity=0.169 Sum_probs=130.5
Q ss_pred hhhhHhhhhccCCCCCccccccchhhccc-cchhHHHHHHHHhhhccccCCCCcCCCCChHhHH-HHHHhCCCCHHHH--
Q 025118 4 SANRSFLRAFDYDGSSSLTFGERICAACI-PLIAIIEAVVITVASCFRYRPPVQKCRFDVGDLA-RLAAESRFSVNEL-- 79 (257)
Q Consensus 4 ~a~~~~f~~ld~~~~~rls~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ei-- 79 (257)
+----+|...|+|.++.||+.|. +.... .....-+...+.-...+...+.++.+.++.++++ .+.+...-+.+++
T Consensus 101 rklmviFsKvDVNtDrkisAkEm-qrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekevad 179 (362)
T KOG4251|consen 101 RKLMVIFSKVDVNTDRKISAKEM-QRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVAD 179 (362)
T ss_pred HHHHHHHhhcccCccccccHHHH-HHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHHHH
Confidence 33445788999999999999994 44333 3333334444445556777888888888888876 3333222233222
Q ss_pred ------------------HHHHHHHHhhhcccccCCCCCHHHHHHHHhcC--CCCChHHHHHHHHHHcCCCCCcccHHHH
Q 025118 80 ------------------EALSELYKNLSCSIIKDGLIHKEELQVALFQA--PYGENLFLDRVFDLFDEKKNGVIDFEEF 139 (257)
Q Consensus 80 ------------------~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~--~~~~~~~~~~lf~~~d~~~~g~I~f~ef 139 (257)
+.++..+...|.- ..+-.++.+||..+|..- .......+..|...+|+|++..++-.+|
T Consensus 180 airlneelkVDeEtqevlenlkdRwyqaDsp-padlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpeF 258 (362)
T KOG4251|consen 180 AIRLNEELKVDEETQEVLENLKDRWYQADSP-PADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEF 258 (362)
T ss_pred HhhccCcccccHHHHHHHHhhhhhhccccCc-hhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchhh
Confidence 2222233333321 133345568888877531 1222346788999999999999999999
Q ss_pred HHHHHhh---CCCCCh-----HHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCC
Q 025118 140 VHALNVF---HPYAPI-----EDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDK 211 (257)
Q Consensus 140 ~~~~~~~---~~~~~~-----~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~ 211 (257)
+.+...- ...+.. ..+.+..=..+|.|+||.+|++|+..++. -.+..+.-.++..++ ...|.++
T Consensus 259 islpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~d----P~n~~~alne~~~~m----a~~d~n~ 330 (362)
T KOG4251|consen 259 ISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVD----PQNFRLALNEVNDIM----ALTDANN 330 (362)
T ss_pred hcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcC----chhhhhhHHHHHHHH----hhhccCC
Confidence 8763221 001111 23445555778999999999999999862 223344444444433 6678999
Q ss_pred CCcccHHHHHHH
Q 025118 212 DGRINKEEWKEF 223 (257)
Q Consensus 212 dg~I~~~eF~~~ 223 (257)
+..++.++.++.
T Consensus 331 ~~~Ls~eell~r 342 (362)
T KOG4251|consen 331 DEKLSLEELLER 342 (362)
T ss_pred CcccCHHHHHHH
Confidence 999999988764
No 40
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.86 E-value=2e-08 Score=69.71 Aligned_cols=69 Identities=12% Similarity=0.241 Sum_probs=54.3
Q ss_pred HHHHHHHHh-hCCCCCC-cccHHHHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 154 DKIDFAFRL-YDLRQTG-YIEREEVKQMVAAILME-SEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 154 ~~~~~~F~~-~D~d~~G-~I~~~e~~~~l~~~~~~-~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
..+..+|+. +|.+|+| +|+.+||+.++..-+.. .+...++.++++++ +.+|.|+||.|+|+||+.++..
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll----~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMM----KKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHH----HHcCCCCCCcCcHHHHHHHHHH
Confidence 567889999 7888986 99999999999754322 23345566766655 8899999999999999998876
No 41
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.85 E-value=1.6e-08 Score=66.26 Aligned_cols=61 Identities=33% Similarity=0.480 Sum_probs=50.3
Q ss_pred HHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 157 DFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 157 ~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
+.+|+.+|.+++|.|+.+|+..++. ..| .+.++++. +|..+|.+++|.|+++||+.++..-
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~----~~g--~~~~~~~~----i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLG----KSG--LPRSVLAQ----IWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHH----HcC--CCHHHHHH----HHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 5689999999999999999999984 334 36666544 4588999999999999999988753
No 42
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.84 E-value=2.1e-08 Score=70.90 Aligned_cols=65 Identities=32% Similarity=0.463 Sum_probs=54.2
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 153 ~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
...++.+|+.+|.+++|.|+.+|+..+++. .| ++.++++++ +..+|.+++|.|+|+||+.++..-
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~----~~--~~~~ev~~i----~~~~d~~~~g~I~~~eF~~~~~~~ 73 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLK----SG--LPQTLLAKI----WNLADIDNDGELDKDEFALAMHLI 73 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHH----cC--CCHHHHHHH----HHHhcCCCCCCcCHHHHHHHHHHH
Confidence 356889999999999999999999999853 33 677665554 478899999999999999998753
No 43
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.83 E-value=2.9e-08 Score=69.70 Aligned_cols=69 Identities=23% Similarity=0.444 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHhhh-cccccCC-CCCHHHHHHHHhc-CC-----CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhC
Q 025118 77 NELEALSELYKNLS-CSIIKDG-LIHKEELQVALFQ-AP-----YGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFH 147 (257)
Q Consensus 77 ~ei~~l~~~F~~~d-~~~~~~G-~i~~~ef~~~l~~-~~-----~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~ 147 (257)
..+..+.++|..+| .| ++| +|+..||+.++.. .+ ......+..+++.+|.|++|.|+|+||+.++..+.
T Consensus 7 ~a~~~~~~~F~~~dd~d--gdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~ 83 (93)
T cd05026 7 GAMDTLIRIFHNYSGKE--GDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT 83 (93)
T ss_pred HHHHHHHHHHHHHHccC--CCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 45677777888887 56 887 5999999998854 21 22345788899999999999999999988876653
No 44
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.80 E-value=2.9e-08 Score=72.23 Aligned_cols=62 Identities=26% Similarity=0.449 Sum_probs=51.2
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 153 ~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
...+..+|..+|.|+||.|+.+|+..+. . ... +..+..+|..+|.|+||.||++||..++.+
T Consensus 47 ~~~l~w~F~~lD~d~DG~Ls~~EL~~~~------l--~~~----e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~~ 108 (116)
T cd00252 47 KDPVGWMFNQLDGNYDGKLSHHELAPIR------L--DPN----EHCIKPFFESCDLDKDGSISLDEWCYCFIK 108 (116)
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHH------c--cch----HHHHHHHHHHHCCCCCCCCCHHHHHHHHhC
Confidence 4678999999999999999999999874 1 111 334667789999999999999999999943
No 45
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.80 E-value=2e-08 Score=63.03 Aligned_cols=52 Identities=31% Similarity=0.531 Sum_probs=44.5
Q ss_pred CCCcccHHHHHHHHHHHHHhhcCC-CCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 167 QTGYIEREEVKQMVAAILMESEIK-LPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 167 ~~G~I~~~e~~~~l~~~~~~~g~~-~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
++|.|+.++|+.++ ...|.. +++++++.+ |..+|.+++|.|+|+||+.++..
T Consensus 1 ~~G~i~~~~~~~~l----~~~g~~~~s~~e~~~l----~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRAL----SKLGIKDLSEEEVDRL----FREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHH----HHTTSSSSCHHHHHHH----HHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHH----HHhCCCCCCHHHHHHH----HHhcccCCCCCCCHHHHHHHHHh
Confidence 47999999999998 456888 999885554 48899999999999999999864
No 46
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=98.79 E-value=8.1e-08 Score=82.31 Aligned_cols=123 Identities=17% Similarity=0.282 Sum_probs=98.5
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHH
Q 025118 117 LFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLL 196 (257)
Q Consensus 117 ~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~ 196 (257)
..++.+|+.+|.+++|.|+..+...++..+.......+.+..+|...|.|.+|.++++||++.+. + -
T Consensus 14 ~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~-----------~--~ 80 (463)
T KOG0036|consen 14 IRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLD-----------N--K 80 (463)
T ss_pred HHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHH-----------H--h
Confidence 35788999999999999999999999998875557788899999999999999999999999983 1 1
Q ss_pred HHHHHHHHHHcCCCCCCcccHHHHHHHHHhC------hHHHHhc-CCCCccccccccCcceee
Q 025118 197 EAIIDKTFADADIDKDGRINKEEWKEFAVRN------PSLLKNM-TLPYLTDITTIFPSFVFN 252 (257)
Q Consensus 197 ~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~ 252 (257)
|.-+..+|+.+|.+.||.|+.+|.-+.++.. .....++ -++.++++.-.|.+|-.|
T Consensus 81 E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~ 143 (463)
T KOG0036|consen 81 ELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDH 143 (463)
T ss_pred HHHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhh
Confidence 2225678899999999999999999988754 2222223 444666677777777655
No 47
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.78 E-value=4.2e-08 Score=68.00 Aligned_cols=68 Identities=24% Similarity=0.379 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHhhh-cccccCC-CCCHHHHHHHHhc-----CCCC-ChHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 025118 77 NELEALSELYKNLS-CSIIKDG-LIHKEELQVALFQ-----APYG-ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVF 146 (257)
Q Consensus 77 ~ei~~l~~~F~~~d-~~~~~~G-~i~~~ef~~~l~~-----~~~~-~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 146 (257)
..|..+.++|+.+| .+ ++| +|+..||+.++.. .+.. ....+..+++.+|.|++|.|+|+||+.++...
T Consensus 5 ~~~~~l~~aF~~fD~~d--gdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 5 KAMVALIDVFHQYSGRE--GDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHHHHHhcccC--CCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 45777788888887 57 888 5888888888876 4433 34558888888888888888888888776543
No 48
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=98.77 E-value=2.9e-07 Score=89.29 Aligned_cols=141 Identities=16% Similarity=0.309 Sum_probs=113.9
Q ss_pred hCCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCC--------ChHHHHHHHHHHcCCCCCcccHHHHHHH
Q 025118 71 ESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYG--------ENLFLDRVFDLFDEKKNGVIDFEEFVHA 142 (257)
Q Consensus 71 ~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~--------~~~~~~~lf~~~d~~~~g~I~f~ef~~~ 142 (257)
.+.++++.+..+.-+|+.+|.+ .+|.+++.+|..+|+.++.. ..|...+++..+|++.+|+|+..+|+.+
T Consensus 2244 ~~GVtEe~L~EFs~~fkhFDke--k~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~af 2321 (2399)
T KOG0040|consen 2244 HNGVTEEQLKEFSMMFKHFDKE--KNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAF 2321 (2399)
T ss_pred cCCCCHHHHHHHHHHHHHhchh--hccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHH
Confidence 3678999999999999999999 99999999999999876533 2468999999999999999999999999
Q ss_pred HHhhCC-CCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCC----CCCcccH
Q 025118 143 LNVFHP-YAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADID----KDGRINK 217 (257)
Q Consensus 143 ~~~~~~-~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~----~dg~I~~ 217 (257)
+..... .-...+.+..+|+.+|. +..+|+.+++..-+ +.++.+-.+..|-..+++. -.+.++|
T Consensus 2322 mi~~ETeNI~s~~eIE~AfraL~a-~~~yvtke~~~~~l-----------treqaefc~s~m~~~~e~~~~~s~q~~l~y 2389 (2399)
T KOG0040|consen 2322 MISKETENILSSEEIEDAFRALDA-GKPYVTKEELYQNL-----------TREQAEFCMSKMKPYAETSSGRSDQVALDY 2389 (2399)
T ss_pred HHhcccccccchHHHHHHHHHhhc-CCccccHHHHHhcC-----------CHHHHHHHHHHhhhhcccccCCCccccccH
Confidence 876642 22345689999999998 89999999987754 6666666565555666663 2357999
Q ss_pred HHHHHHHH
Q 025118 218 EEWKEFAV 225 (257)
Q Consensus 218 ~eF~~~l~ 225 (257)
.+|++-+.
T Consensus 2390 ~dfv~sl~ 2397 (2399)
T KOG0040|consen 2390 KDFVNSLF 2397 (2399)
T ss_pred HHHHHHHh
Confidence 99998764
No 49
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=98.75 E-value=4.7e-08 Score=81.21 Aligned_cols=165 Identities=19% Similarity=0.217 Sum_probs=120.7
Q ss_pred CChHhHHHHHHhCCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCCCCcccHHHH
Q 025118 60 FDVGDLARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEF 139 (257)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef 139 (257)
.+.-++.++.+...+...-+..-...+...... .+++.|-..||...++ ......+.-+|..||.+++|.++|.|.
T Consensus 206 a~l~eF~~~~r~lkL~~~gl~k~ld~y~~var~-~kg~~igi~efa~~l~---vpvsd~l~~~f~LFde~~tg~~D~re~ 281 (412)
T KOG4666|consen 206 ASLPEFVAKRRVLKLPLVGLIKKLDGYVYVARE-AKGPDIGIVEFAVNLR---VPVSDKLAPTFMLFDEGTTGNGDYRET 281 (412)
T ss_pred cchHHHHHHHhccCCChHHHHHHHhhHHHHHHh-ccCCCcceeEeeeeee---cchhhhhhhhhheecCCCCCcccHHHH
Confidence 344455555555556555544433333333322 2667788888765543 222345677999999999999999999
Q ss_pred HHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcC-CCCHHHHHHHHHHHHHHcCCCCCCcccHH
Q 025118 140 VHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEI-KLPDDLLEAIIDKTFADADIDKDGRINKE 218 (257)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~-~~s~~~~~~~~~~~f~~~d~~~dg~I~~~ 218 (257)
...++.++.......-++.+|+.|+.+-||.+...+|.-+++.. .|. .+. +-.+|..++...+|+|++.
T Consensus 282 v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~---lgv~~l~-------v~~lf~~i~q~d~~ki~~~ 351 (412)
T KOG4666|consen 282 VKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVV---LGVEVLR-------VPVLFPSIEQKDDPKIYAS 351 (412)
T ss_pred hhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHh---cCcceee-------ccccchhhhcccCcceeHH
Confidence 99999998777788899999999999999999999999998643 332 222 3457788888889999999
Q ss_pred HHHHHHHhChHHHHhc-CCCC
Q 025118 219 EWKEFAVRNPSLLKNM-TLPY 238 (257)
Q Consensus 219 eF~~~l~~~~~~~~~~-~~~~ 238 (257)
+|.+++..+|++.... ++..
T Consensus 352 ~f~~fa~~~p~~a~~~~~yld 372 (412)
T KOG4666|consen 352 NFRKFAATEPNLALSELGYLD 372 (412)
T ss_pred HHHHHHHhCchhhhhhhcccc
Confidence 9999999999988533 4433
No 50
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.73 E-value=6.1e-08 Score=61.78 Aligned_cols=61 Identities=30% Similarity=0.491 Sum_probs=51.4
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHH
Q 025118 156 IDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFA 224 (257)
Q Consensus 156 ~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l 224 (257)
+..+|..+|.+++|.|+.+|+..++. ..+...+.+.+. .+|..+|.+++|.|++++|+.++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~----~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALK----SLGEGLSEEEID----EMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHH----HhCCCCCHHHHH----HHHHHhCCCCCCeEeHHHHHHHh
Confidence 56789999999999999999999984 456777776644 45688999999999999998875
No 51
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.73 E-value=1.4e-07 Score=70.28 Aligned_cols=98 Identities=21% Similarity=0.331 Sum_probs=84.7
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHH
Q 025118 118 FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLE 197 (257)
Q Consensus 118 ~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~ 197 (257)
+..+.|+.+|.|+||.|+-+++...+..+. ...+++.+..+++ ...|.|++.-|..++ |..++....+
T Consensus 33 EfKEAF~~mDqnrDG~IdkeDL~d~~aSlG-k~~~d~elDaM~~----Ea~gPINft~FLTmf-------GekL~gtdpe 100 (171)
T KOG0031|consen 33 EFKEAFNLMDQNRDGFIDKEDLRDMLASLG-KIASDEELDAMMK----EAPGPINFTVFLTMF-------GEKLNGTDPE 100 (171)
T ss_pred HHHHHHHHHhccCCCcccHHHHHHHHHHcC-CCCCHHHHHHHHH----hCCCCeeHHHHHHHH-------HHHhcCCCHH
Confidence 456789999999999999999999999997 4488889998887 678999999999887 5555555567
Q ss_pred HHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 198 AIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 198 ~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
+.|...|+.+|.++.|.|.-+.+.++|...
T Consensus 101 ~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~ 130 (171)
T KOG0031|consen 101 EVILNAFKTFDDEGSGKIDEDYLRELLTTM 130 (171)
T ss_pred HHHHHHHHhcCccCCCccCHHHHHHHHHHh
Confidence 779999999999999999999999999874
No 52
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.71 E-value=6.5e-08 Score=63.34 Aligned_cols=59 Identities=31% Similarity=0.511 Sum_probs=35.5
Q ss_pred HHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 025118 84 ELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNV 145 (257)
Q Consensus 84 ~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~ 145 (257)
+.|..+|++ ++|.|+.+|+..++...+. ....+..++..+|.+++|.|+|+||+.++..
T Consensus 3 ~~F~~~D~~--~~G~i~~~el~~~l~~~g~-~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 3 QIFRSLDPD--GDGLISGDEARPFLGKSGL-PRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred HHHHHhCCC--CCCcCcHHHHHHHHHHcCC-CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 455566665 6666666666666655433 3445666666666666666666666665543
No 53
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.70 E-value=1e-07 Score=66.23 Aligned_cols=69 Identities=22% Similarity=0.424 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHhhhc--ccccCCCCCHHHHHHHHhc-CCC-----CChHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 025118 76 VNELEALSELYKNLSC--SIIKDGLIHKEELQVALFQ-APY-----GENLFLDRVFDLFDEKKNGVIDFEEFVHALNVF 146 (257)
Q Consensus 76 ~~ei~~l~~~F~~~d~--~~~~~G~i~~~ef~~~l~~-~~~-----~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 146 (257)
+++++.+..+|..+|+ + ++|.|+..+|..++.. .+. .....+..++..+|.+++|.|+|++|+.++...
T Consensus 4 ~~~~~~l~~~F~~~D~~~~--~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEG--DKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHHHHhhccC--CCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 4567788888888888 7 8999999999988754 222 135678889999999999999999998887654
No 54
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.66 E-value=1.1e-07 Score=66.58 Aligned_cols=67 Identities=25% Similarity=0.408 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhhh-cccccCCC-CCHHHHHHHHhc-CCC-----CChHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 025118 78 ELEALSELYKNLS-CSIIKDGL-IHKEELQVALFQ-APY-----GENLFLDRVFDLFDEKKNGVIDFEEFVHALNVF 146 (257)
Q Consensus 78 ei~~l~~~F~~~d-~~~~~~G~-i~~~ef~~~l~~-~~~-----~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 146 (257)
.+..+.++|+.+| .+ ++|+ |+..||+.++.. .+. .....+..+++.+|.+++|.|+|++|+.++..+
T Consensus 7 ~~~~l~~~F~~fDd~d--g~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 7 AMETLINVFHAHSGKE--GDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHHHHHHHHhccc--CCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 3566777777775 77 8884 888888888753 321 234567888888888888888888888776654
No 55
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.66 E-value=2.1e-07 Score=64.47 Aligned_cols=68 Identities=16% Similarity=0.321 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhhhc-cccc-CCCCCHHHHHHHHhc---CCC-CChHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 025118 77 NELEALSELYKNLSC-SIIK-DGLIHKEELQVALFQ---APY-GENLFLDRVFDLFDEKKNGVIDFEEFVHALNVF 146 (257)
Q Consensus 77 ~ei~~l~~~F~~~d~-~~~~-~G~i~~~ef~~~l~~---~~~-~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 146 (257)
+.+..+...|.++|. + + +|+|+.+||+.++.. .+. .....+..+++.+|.|++|.|+|+||+..+..+
T Consensus 7 ~~~~~~i~~F~~y~~~~--~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 7 QAIGLLVAIFHKYSGRE--GDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHHHHccC--CCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 457777888888887 4 5 789999999998852 232 345688999999999999999999998887654
No 56
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.63 E-value=2.2e-07 Score=64.54 Aligned_cols=69 Identities=20% Similarity=0.351 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHh-hhcccccCC-CCCHHHHHHHHhcC-C-----CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 025118 76 VNELEALSELYKN-LSCSIIKDG-LIHKEELQVALFQA-P-----YGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVF 146 (257)
Q Consensus 76 ~~ei~~l~~~F~~-~d~~~~~~G-~i~~~ef~~~l~~~-~-----~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 146 (257)
++.+..+...|.+ .|.+ ++| +|+.+||+.++... + ......+..+++.+|.|++|.|+|+||+..+..+
T Consensus 5 e~~i~~l~~~F~~y~~~d--g~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 5 ERCIESLIAVFQKYAGKD--GDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHHHHHhccC--CCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 3567888888988 6666 665 99999999988763 1 2234578889999999999999999999887654
No 57
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=98.61 E-value=2.3e-07 Score=74.34 Aligned_cols=187 Identities=12% Similarity=0.067 Sum_probs=115.4
Q ss_pred HHHHHHhhhccccCCCCcCCCCChHhHHHHHHhCC--CCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCCh
Q 025118 39 EAVVITVASCFRYRPPVQKCRFDVGDLARLAAESR--FSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGEN 116 (257)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~ 116 (257)
...+..++.++...+-+-...++..+++++....- --.+....-.-.|+..|+| ++|.|+++||..-+........
T Consensus 97 rrsrrklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpd--gDGhvsWdEykvkFlaskghse 174 (362)
T KOG4251|consen 97 RRSRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPD--GDGHVSWDEYKVKFLASKGHSE 174 (362)
T ss_pred hHHHHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCC--CCCceehhhhhhHHHhhcCcch
Confidence 34555566666666666667777777666553210 0011122223356677777 7777777777654322111000
Q ss_pred ---------------HHHHHHHHHHcCCCCCcc---------cHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCccc
Q 025118 117 ---------------LFLDRVFDLFDEKKNGVI---------DFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIE 172 (257)
Q Consensus 117 ---------------~~~~~lf~~~d~~~~g~I---------~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~ 172 (257)
..-.+.+..-+.++.|.. +-+||+.++..-...+....-++.+.+.+|+|||..++
T Consensus 175 kevadairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlS 254 (362)
T KOG4251|consen 175 KEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLS 254 (362)
T ss_pred HHHHHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeec
Confidence 011223444344444443 33777766655444556667788999999999999999
Q ss_pred HHHHHHHHHHHH-HhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 173 REEVKQMVAAIL-MESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 173 ~~e~~~~l~~~~-~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
..||........ ..-|..+.+-.++...+++-..+|.|.||.++++|...++-..
T Consensus 255 vpeFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~dP~ 310 (362)
T KOG4251|consen 255 VPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVDPQ 310 (362)
T ss_pred chhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcCch
Confidence 999998653211 1134666666677777777788999999999999999986543
No 58
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.60 E-value=2.8e-07 Score=64.83 Aligned_cols=66 Identities=18% Similarity=0.400 Sum_probs=44.0
Q ss_pred HHHHHHHHHhhhc-cccc-CCCCCHHHHHHHHhc-C----CC-CChHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 025118 79 LEALSELYKNLSC-SIIK-DGLIHKEELQVALFQ-A----PY-GENLFLDRVFDLFDEKKNGVIDFEEFVHALNVF 146 (257)
Q Consensus 79 i~~l~~~F~~~d~-~~~~-~G~i~~~ef~~~l~~-~----~~-~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 146 (257)
+..+.++|..+|. + + +|+|+..||..++.. . +. .....+..+++.+|.+++|.|+|++|+.++...
T Consensus 7 ~~~l~~~F~~~D~~d--g~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 7 MESLILTFHRYAGKD--GDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHHHHhccC--CCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4556667777765 5 6 578888888777653 1 11 234567777777777777778888877666543
No 59
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.58 E-value=4e-07 Score=57.90 Aligned_cols=60 Identities=30% Similarity=0.415 Sum_probs=43.7
Q ss_pred HHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q 025118 120 DRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMV 180 (257)
Q Consensus 120 ~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l 180 (257)
..+|..+|.+++|.|++++|..++.... .....+.+..+|+.+|.+++|.|+.++|..++
T Consensus 3 ~~~f~~~d~~~~g~l~~~e~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 3 REAFRLFDKDGDGTISADELKAALKSLG-EGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHhC-CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 4567777777777778877777777664 45556667777788877777888887776654
No 60
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.58 E-value=2.9e-07 Score=63.91 Aligned_cols=67 Identities=25% Similarity=0.432 Sum_probs=52.4
Q ss_pred HHHHHHHHhhCCC--CCCcccHHHHHHHHHHHHHhhcCCCC----HHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 154 DKIDFAFRLYDLR--QTGYIEREEVKQMVAAILMESEIKLP----DDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 154 ~~~~~~F~~~D~d--~~G~I~~~e~~~~l~~~~~~~g~~~s----~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
..+...|..|+.. ++|.|+.+||+.++.. ..|..++ +++++. +|..+|.+++|.|+|+||+.++...
T Consensus 8 ~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~---~~g~~~t~~~~~~~v~~----i~~~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 8 ETIINVFHQYSVRKGHPDTLYKKEFKQLVEK---ELPNFLKKEKNQKAIDK----IFEDLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred HHHHHHHHHHhccCCCcccCCHHHHHHHHHH---HhhHhhccCCCHHHHHH----HHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 4577899999866 4799999999999963 3344444 666554 5588999999999999999998764
No 61
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.52 E-value=6.4e-07 Score=65.21 Aligned_cols=63 Identities=17% Similarity=0.265 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHH
Q 025118 76 VNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHAL 143 (257)
Q Consensus 76 ~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~ 143 (257)
......+.-.|..+|.| ++|+|+.+|+..+. -......+..+|..+|.|++|.||++||..++
T Consensus 44 ~~~~~~l~w~F~~lD~d--~DG~Ls~~EL~~~~---l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 44 PMCKDPVGWMFNQLDGN--YDGKLSHHELAPIR---LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHHHHHHHCCC--CCCcCCHHHHHHHH---ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 34455566666666666 67777777766543 11223345566666666666666666666665
No 62
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.50 E-value=2.9e-06 Score=62.28 Aligned_cols=105 Identities=15% Similarity=0.112 Sum_probs=85.4
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCC--CCCcccHHHHHHHHHHHHHhhcCCCCHH
Q 025118 117 LFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLR--QTGYIEREEVKQMVAAILMESEIKLPDD 194 (257)
Q Consensus 117 ~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d--~~G~I~~~e~~~~l~~~~~~~g~~~s~~ 194 (257)
++++.+|..||.++||.|++.+.-.++..+. ..++...+......++.+ +--.|++++|.-++.++.++ ....+-+
T Consensus 11 ~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG-~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vakn-k~q~t~e 88 (152)
T KOG0030|consen 11 EEFKEAFLLFDRTGDGKISGSQVGDVLRALG-QNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKN-KDQGTYE 88 (152)
T ss_pred HHHHHHHHHHhccCcccccHHHHHHHHHHhc-CCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhc-cccCcHH
Confidence 5789999999999999999999999999887 777888888899988877 55789999999999776433 3344444
Q ss_pred HHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 195 LLEAIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 195 ~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
+.-+-+ +.+|..++|.|...|+.+.|...
T Consensus 89 dfvegL----rvFDkeg~G~i~~aeLRhvLttl 117 (152)
T KOG0030|consen 89 DFVEGL----RVFDKEGNGTIMGAELRHVLTTL 117 (152)
T ss_pred HHHHHH----HhhcccCCcceeHHHHHHHHHHH
Confidence 433333 78999999999999999998763
No 63
>PF14658 EF-hand_9: EF-hand domain
Probab=98.49 E-value=6.6e-07 Score=57.55 Aligned_cols=62 Identities=18% Similarity=0.319 Sum_probs=52.8
Q ss_pred HHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCC-CcccHHHHHHHHHh
Q 025118 158 FAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKD-GRINKEEWKEFAVR 226 (257)
Q Consensus 158 ~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~d-g~I~~~eF~~~l~~ 226 (257)
.+|.+||.++.|.|...++..+|+++ .+...++.+++.+. ..+|+++. |.|+++.|+..|++
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~---~~~~p~e~~Lq~l~----~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAV---TGRSPEESELQDLI----NELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHH---cCCCCcHHHHHHHH----HHhCCCCCCceEeHHHHHHHHHH
Confidence 47999999999999999999999643 33377788877766 88999988 99999999999875
No 64
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.45 E-value=7.3e-07 Score=55.81 Aligned_cols=49 Identities=35% Similarity=0.508 Sum_probs=24.6
Q ss_pred CCcccHHHHHHHHHhhCCCC-ChHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q 025118 131 NGVIDFEEFVHALNVFHPYA-PIEDKIDFAFRLYDLRQTGYIEREEVKQMV 180 (257)
Q Consensus 131 ~g~I~f~ef~~~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l 180 (257)
+|.|+.++|..++..+. .. ...+++..+|..+|.+++|.|+.+||..++
T Consensus 2 ~G~i~~~~~~~~l~~~g-~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~ 51 (54)
T PF13833_consen 2 DGKITREEFRRALSKLG-IKDLSEEEVDRLFREFDTDGDGYISFDEFISMM 51 (54)
T ss_dssp SSEEEHHHHHHHHHHTT-SSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHH
T ss_pred cCEECHHHHHHHHHHhC-CCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Confidence 34555555555553332 23 444445555555555555555555555544
No 65
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.45 E-value=2.3e-07 Score=50.06 Aligned_cols=26 Identities=38% Similarity=0.549 Sum_probs=19.7
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHHH
Q 025118 156 IDFAFRLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 156 ~~~~F~~~D~d~~G~I~~~e~~~~l~ 181 (257)
++.+|+.||+|++|+|+++||..+++
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~ 27 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMK 27 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 56777778888888888888777764
No 66
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.42 E-value=1.5e-06 Score=60.29 Aligned_cols=71 Identities=18% Similarity=0.320 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhc-CCCCC-----hHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 025118 76 VNELEALSELYKNLSCSIIKDGLIHKEELQVALFQ-APYGE-----NLFLDRVFDLFDEKKNGVIDFEEFVHALNVF 146 (257)
Q Consensus 76 ~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~-~~~~~-----~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 146 (257)
++.|..+...|.+++..-+++|+|+..||+.++.. .+... ...+..+|+.+|.+++|.|+|++|+.++..+
T Consensus 4 e~~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 4 EKAIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred HHHHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 34577888888888864224789999999998853 32211 4678888999999889999999998877644
No 67
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=98.31 E-value=1.2e-05 Score=69.70 Aligned_cols=154 Identities=17% Similarity=0.259 Sum_probs=103.6
Q ss_pred cCCCCChHhHHHHHHhCCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHh----c--CCC--------CC--hH--
Q 025118 56 QKCRFDVGDLARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALF----Q--APY--------GE--NL-- 117 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~----~--~~~--------~~--~~-- 117 (257)
..+-+++.++.-+...-..+.... .-+|.-+|.| +||.|+.+||..... + .+. +. ..
T Consensus 212 ~~GLIsfSdYiFLlTlLS~p~~~F---~IAFKMFD~d--gnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~ 286 (489)
T KOG2643|consen 212 ESGLISFSDYIFLLTLLSIPERNF---RIAFKMFDLD--GNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEV 286 (489)
T ss_pred CCCeeeHHHHHHHHHHHccCcccc---eeeeeeeecC--CCCcccHHHHHHHHHHHHhccccceecccCccccceehhhh
Confidence 455678888777664322233333 3456677777 999999999977531 1 111 00 10
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHH
Q 025118 118 FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLE 197 (257)
Q Consensus 118 ~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~ 197 (257)
.-..+--.|..++++.+++++|+..+..+. .+-++.-|..+|+..+|.|+..+|..++-+. .+.+.. ...
T Consensus 287 nsaL~~yFFG~rg~~kLs~deF~~F~e~Lq-----~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~---a~~n~~--~k~ 356 (489)
T KOG2643|consen 287 NSALLTYFFGKRGNGKLSIDEFLKFQENLQ-----EEILELEFERFDKGDSGAISEVDFAELLLAY---AGVNSK--KKH 356 (489)
T ss_pred hhhHHHHhhccCCCccccHHHHHHHHHHHH-----HHHHHHHHHHhCcccccccCHHHHHHHHHHH---cccchH--hHH
Confidence 112344568999999999999999998765 4567788999999999999999999998532 333322 233
Q ss_pred HHHHHHHHHcCCCCCCcccHHHHHHHHH
Q 025118 198 AIIDKTFADADIDKDGRINKEEWKEFAV 225 (257)
Q Consensus 198 ~~~~~~f~~~d~~~dg~I~~~eF~~~l~ 225 (257)
.+++++-+.++.+ +..||++||..+..
T Consensus 357 ~~lkrvk~kf~~~-~~gISl~Ef~~Ff~ 383 (489)
T KOG2643|consen 357 KYLKRVKEKFKDD-GKGISLQEFKAFFR 383 (489)
T ss_pred HHHHHHHHhccCC-CCCcCHHHHHHHHH
Confidence 3455555777765 44699999988764
No 68
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.29 E-value=6.5e-06 Score=64.17 Aligned_cols=110 Identities=19% Similarity=0.240 Sum_probs=84.1
Q ss_pred HHHhCCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCCh-HHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 025118 68 LAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGEN-LFLDRVFDLFDEKKNGVIDFEEFVHALNVF 146 (257)
Q Consensus 68 ~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~-~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 146 (257)
+..-..|+..+|+.+...|..+|.+ .||+|+..|++..+..++-+.. .-+..++..+|.|.+|.|+|.||+.++...
T Consensus 87 yteF~eFsrkqIk~~~~~Fk~yDe~--rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrka 164 (244)
T KOG0041|consen 87 YTEFSEFSRKQIKDAESMFKQYDED--RDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKA 164 (244)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhccc--ccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHH
Confidence 3333468899999999999999999 9999999999999987765543 357889999999999999999999988766
Q ss_pred CCCCCh-HHHHHHHHHh--hCCCCCCcccHHHHHHH
Q 025118 147 HPYAPI-EDKIDFAFRL--YDLRQTGYIEREEVKQM 179 (257)
Q Consensus 147 ~~~~~~-~~~~~~~F~~--~D~d~~G~I~~~e~~~~ 179 (257)
...... ...+..+=+. .|...-|..-...|-.+
T Consensus 165 aagEL~~ds~~~~LAr~~eVDVskeGV~GAknFFeA 200 (244)
T KOG0041|consen 165 AAGELQEDSGLLRLARLSEVDVSKEGVSGAKNFFEA 200 (244)
T ss_pred hccccccchHHHHHHHhcccchhhhhhhhHHHHHHH
Confidence 432222 2223333333 78888888777777665
No 69
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.27 E-value=1.4e-06 Score=46.95 Aligned_cols=27 Identities=41% Similarity=0.717 Sum_probs=23.7
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHh
Q 025118 119 LDRVFDLFDEKKNGVIDFEEFVHALNV 145 (257)
Q Consensus 119 ~~~lf~~~d~~~~g~I~f~ef~~~~~~ 145 (257)
++.+|+.+|.|++|.|+++||+.++..
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 578999999999999999999988764
No 70
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.25 E-value=1.1e-05 Score=55.63 Aligned_cols=68 Identities=12% Similarity=0.363 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhc-CC-----CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhC
Q 025118 77 NELEALSELYKNLSCSIIKDGLIHKEELQVALFQ-AP-----YGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFH 147 (257)
Q Consensus 77 ~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~-~~-----~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~ 147 (257)
..+..+...|.++.. +.|.++..||+..+.. +| ...+..++.++..+|.|+||.|+|.||+..+..+.
T Consensus 5 ~ai~~lI~~FhkYaG---~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~ 78 (91)
T cd05024 5 HSMEKMMLTFHKFAG---EKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLL 78 (91)
T ss_pred HHHHHHHHHHHHHcC---CCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 457788888999885 4679999999998754 22 22345789999999999999999999999887653
No 71
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.20 E-value=7.2e-06 Score=63.91 Aligned_cols=102 Identities=16% Similarity=0.211 Sum_probs=62.1
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHH
Q 025118 118 FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLE 197 (257)
Q Consensus 118 ~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~ 197 (257)
....+|+.||.+.||+|++.|+..++..+. ...+.--++.+.+..|.|++|.|++-||.-+++.. ..|.--.+....
T Consensus 100 ~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLg-apQTHL~lK~mikeVded~dgklSfreflLIfrka--aagEL~~ds~~~ 176 (244)
T KOG0041|consen 100 DAESMFKQYDEDRDGFIDLMELKRMMEKLG-APQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKA--AAGELQEDSGLL 176 (244)
T ss_pred HHHHHHHHhcccccccccHHHHHHHHHHhC-CchhhHHHHHHHHHhhcccccchhHHHHHHHHHHH--hccccccchHHH
Confidence 456677777777777777777777777665 34444556777777777777777777777776532 123222233333
Q ss_pred HHHHHHHHHcCCCCCCcccHHHHHHHH
Q 025118 198 AIIDKTFADADIDKDGRINKEEWKEFA 224 (257)
Q Consensus 198 ~~~~~~f~~~d~~~dg~I~~~eF~~~l 224 (257)
.+.+ ..++|..+-|.-.-..|-++=
T Consensus 177 ~LAr--~~eVDVskeGV~GAknFFeAK 201 (244)
T KOG0041|consen 177 RLAR--LSEVDVSKEGVSGAKNFFEAK 201 (244)
T ss_pred HHHH--hcccchhhhhhhhHHHHHHHH
Confidence 3331 144666666666666666553
No 72
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=98.19 E-value=3.2e-05 Score=68.05 Aligned_cols=189 Identities=14% Similarity=0.196 Sum_probs=117.0
Q ss_pred hccCCCCCccccccchhhcc--ccchhHHHHHHHHhhhccccCCCCcCCCCChHhHHHHHHhCCCCHHHHHHHHHHHHhh
Q 025118 12 AFDYDGSSSLTFGERICAAC--IPLIAIIEAVVITVASCFRYRPPVQKCRFDVGDLARLAAESRFSVNELEALSELYKNL 89 (257)
Q Consensus 12 ~ld~~~~~rls~~e~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~l~~~F~~~ 89 (257)
..+.++..-.|...++..-. +......+..+..+.+..+ ..+.+.++++++..+....+....-.... |..+
T Consensus 44 s~e~~ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD---~tKDglisf~eF~afe~~lC~pDal~~~a---FqlF 117 (694)
T KOG0751|consen 44 SIEKNGESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIAD---QTKDGLISFQEFRAFESVLCAPDALFEVA---FQLF 117 (694)
T ss_pred HHhhccccccCHHHHHHHHHhhcccccCChHHHHHHHhhhh---hcccccccHHHHHHHHhhccCchHHHHHH---HHHh
Confidence 45566666666665443321 1223344555555555443 33666899999888776544433333344 5555
Q ss_pred hcccccCCCCCHHHHHHHHhcCCCC-------ChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHh
Q 025118 90 SCSIIKDGLIHKEELQVALFQAPYG-------ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRL 162 (257)
Q Consensus 90 d~~~~~~G~i~~~ef~~~l~~~~~~-------~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~ 162 (257)
|+. ++|.+|++++.+++++..+. .++.+.. .|..+..-.++|.+|.+.+..+. .|..+++|+.
T Consensus 118 Dr~--~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~---~Fg~~~~r~~ny~~f~Q~lh~~~-----~E~~~qafr~ 187 (694)
T KOG0751|consen 118 DRL--GNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKL---HFGDIRKRHLNYAEFTQFLHEFQ-----LEHAEQAFRE 187 (694)
T ss_pred ccc--CCCceehHHHHHHHhccccccCCCccCCcchHHH---HhhhHHHHhccHHHHHHHHHHHH-----HHHHHHHHHH
Confidence 555 99999999999998774322 1234444 45555566899999999987653 4668899999
Q ss_pred hCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHH
Q 025118 163 YDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEF 223 (257)
Q Consensus 163 ~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~ 223 (257)
.|+.++|.|+.=+|..++.. ...++....+++.+- .....+...++|+..|...
T Consensus 188 ~d~~~ng~is~Ldfq~imvt----~~~h~lt~~v~~nlv---~vagg~~~H~vSf~yf~af 241 (694)
T KOG0751|consen 188 KDKAKNGFISVLDFQDIMVT----IRIHLLTPFVEENLV---SVAGGNDSHQVSFSYFNAF 241 (694)
T ss_pred hcccCCCeeeeechHhhhhh----hhhhcCCHHHhhhhh---hhcCCCCccccchHHHHHH
Confidence 99999999999999998742 223333333433221 2333344456776666544
No 73
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.19 E-value=4.7e-06 Score=57.48 Aligned_cols=69 Identities=16% Similarity=0.340 Sum_probs=51.0
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 154 DKIDFAFRLYDLRQTGYIEREEVKQMVAAILME-SEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 154 ~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~-~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
..+..+|..|- .+.|.++..||+.++.+=+.. .+...++.. ++.+++..|.|+||.|+|+||+.++..-
T Consensus 8 ~~lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~----vd~im~~LD~n~Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 8 EKMMLTFHKFA-GEKNYLNRDDLQKLMEKEFSEFLKNQNDPMA----VDKIMKDLDDCRDGKVGFQSFFSLIAGL 77 (91)
T ss_pred HHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhHHHHcCCCCHHH----HHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 34667899997 556799999999999743222 223334445 4555588999999999999999998764
No 74
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=98.19 E-value=3.9e-05 Score=67.55 Aligned_cols=104 Identities=19% Similarity=0.295 Sum_probs=78.7
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhc-CC-CCChH-HHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCC
Q 025118 74 FSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQ-AP-YGENL-FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYA 150 (257)
Q Consensus 74 ~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~-~~-~~~~~-~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~ 150 (257)
-.+.+++.++-.|...+.+ +..+++.++|...... .+ ...++ .++.+-...|..+||.|+|+||+..-..++
T Consensus 30 a~~~eLr~if~~~as~e~~--ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~~lC--- 104 (694)
T KOG0751|consen 30 ADPKELRSIFLKYASIEKN--GESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTKDGLISFQEFRAFESVLC--- 104 (694)
T ss_pred CChHHHHHHHHHHhHHhhc--cccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcccccccHHHHHHHHhhcc---
Confidence 3567777777777777766 7889999999764322 22 22233 445555667888999999999998766665
Q ss_pred ChHHHHHHHHHhhCCCCCCcccHHHHHHHHHH
Q 025118 151 PIEDKIDFAFRLYDLRQTGYIEREEVKQMVAA 182 (257)
Q Consensus 151 ~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~ 182 (257)
.++.....+|+.||..++|.++.+++..++..
T Consensus 105 ~pDal~~~aFqlFDr~~~~~vs~~~~~~if~~ 136 (694)
T KOG0751|consen 105 APDALFEVAFQLFDRLGNGEVSFEDVADIFGQ 136 (694)
T ss_pred CchHHHHHHHHHhcccCCCceehHHHHHHHhc
Confidence 44667888999999999999999999999864
No 75
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.16 E-value=7.9e-06 Score=57.91 Aligned_cols=66 Identities=23% Similarity=0.346 Sum_probs=54.9
Q ss_pred HHHHhhCCCCCCcccHHHHHHHHHHHHH--hhc----CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHH
Q 025118 158 FAFRLYDLRQTGYIEREEVKQMVAAILM--ESE----IKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEF 223 (257)
Q Consensus 158 ~~F~~~D~d~~G~I~~~e~~~~l~~~~~--~~g----~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~ 223 (257)
-.|.+.|.|++|.|+--|+..++..... ..| +-.++.+++.+++.+.+.-|.|+||.|+|.||++.
T Consensus 71 HYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 71 HYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 3678889999999999999988877654 333 34467789999999999999999999999999875
No 76
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=98.11 E-value=1.1e-05 Score=59.65 Aligned_cols=116 Identities=9% Similarity=0.154 Sum_probs=83.3
Q ss_pred CCChHhHHHHHHhCCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCC--CChHHHHHHHHHHcCCCCCcccH
Q 025118 59 RFDVGDLARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPY--GENLFLDRVFDLFDEKKNGVIDF 136 (257)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~--~~~~~~~~lf~~~d~~~~g~I~f 136 (257)
.++.+.+.++-... ...=.+++.++|... |.|.++.++|...+...+- +....+.-.|+.+|-|+|+.|.-
T Consensus 55 ~vp~e~i~kMPELk--enpfk~ri~e~FSeD-----G~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~ 127 (189)
T KOG0038|consen 55 KVPFELIEKMPELK--ENPFKRRICEVFSED-----GRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGH 127 (189)
T ss_pred eecHHHHhhChhhh--cChHHHHHHHHhccC-----CCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccH
Confidence 45555555433211 011245666777654 9999999999998765322 22334667889999999999999
Q ss_pred HHHHHHHHhhCCCCChHHHH----HHHHHhhCCCCCCcccHHHHHHHHH
Q 025118 137 EEFVHALNVFHPYAPIEDKI----DFAFRLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 137 ~ef~~~~~~~~~~~~~~~~~----~~~F~~~D~d~~G~I~~~e~~~~l~ 181 (257)
.++...+..+...+...++. ..+...-|.||||.|++.||..++.
T Consensus 128 ~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~ 176 (189)
T KOG0038|consen 128 DDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVIL 176 (189)
T ss_pred HHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Confidence 99999988887666666554 4566777999999999999999873
No 77
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=98.02 E-value=2.3e-05 Score=68.88 Aligned_cols=57 Identities=33% Similarity=0.468 Sum_probs=48.3
Q ss_pred CCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 149 YAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 149 ~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
.......++.+|+.||.|++|.|+.+||.. ++.+|..+|.|+||.|+++||...+..
T Consensus 329 ~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~---------------------~~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 329 GEAFTHAAQEIFRLYDLDGDGFITREEWLG---------------------SDAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred cChhhHHHHHHHHHhCCCCCCcCcHHHHHH---------------------HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 445567789999999999999999999942 244678999999999999999998864
No 78
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=98.01 E-value=7.1e-06 Score=45.02 Aligned_cols=27 Identities=26% Similarity=0.655 Sum_probs=23.1
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHHH
Q 025118 155 KIDFAFRLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 155 ~~~~~F~~~D~d~~G~I~~~e~~~~l~ 181 (257)
+++.+|+.||.|++|+|+.+||..+++
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 467899999999999999999999985
No 79
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=98.00 E-value=5.5e-05 Score=65.78 Aligned_cols=64 Identities=27% Similarity=0.388 Sum_probs=52.5
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHhhC---CCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q 025118 118 FLDRVFDLFDEKKNGVIDFEEFVHALNVFH---PYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 118 ~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~---~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~ 181 (257)
.+..+|+.+|.|.+|.|+.+||..++..+. +.......+-.+=+.+|.|+||.|+..||..+++
T Consensus 548 ~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFr 614 (631)
T KOG0377|consen 548 SLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFR 614 (631)
T ss_pred hHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHh
Confidence 467799999999999999999998887764 3344566777788889999999999999998874
No 80
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.97 E-value=1e-05 Score=42.02 Aligned_cols=24 Identities=29% Similarity=0.472 Sum_probs=18.5
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHH
Q 025118 156 IDFAFRLYDLRQTGYIEREEVKQM 179 (257)
Q Consensus 156 ~~~~F~~~D~d~~G~I~~~e~~~~ 179 (257)
++.+|+.+|.|+||.|+.+||.++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHH
Confidence 356788888888888888888775
No 81
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=97.96 E-value=0.00032 Score=61.57 Aligned_cols=208 Identities=17% Similarity=0.195 Sum_probs=129.1
Q ss_pred hHhhhhccCCCCCccccccchhhccccchhHHHHHHHHhhhccccCCCCcCCCCCh----HhHHHHHHhCCCCH----HH
Q 025118 7 RSFLRAFDYDGSSSLTFGERICAACIPLIAIIEAVVITVASCFRYRPPVQKCRFDV----GDLARLAAESRFSV----NE 78 (257)
Q Consensus 7 ~~~f~~ld~~~~~rls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~----~e 78 (257)
-++|++++.|..|++|+..+ -..|.............+....... +.+++.. ..++.+..+..++. .+
T Consensus 142 ~~~f~k~~~d~~g~it~~~F-i~~~~~~~~l~~t~~~~~v~~l~~~---~~~yl~q~df~~~Lqeli~Thpl~~l~~~pE 217 (493)
T KOG2562|consen 142 ASTFRKIDGDDTGHITRDKF-INYWMRGLMLTHTRLEQFVNLLIQA---GCSYLRQDDFKPYLQELIATHPLEFLDEEPE 217 (493)
T ss_pred hhhhhhhccCcCCceeHHHH-HHHHHhhhhHHHHHHHHHHHHHhcc---CccceeccccHHHHHHHHhcCCchhhccChh
Confidence 46789999999999999994 4455554443333333233322222 2233332 23344443333211 11
Q ss_pred ------HHHHHHHHHhhhcccccCCCCCHHHHHHH-----HhcCC----------CCChHHHHHH---HHHHcCCCCCcc
Q 025118 79 ------LEALSELYKNLSCSIIKDGLIHKEELQVA-----LFQAP----------YGENLFLDRV---FDLFDEKKNGVI 134 (257)
Q Consensus 79 ------i~~l~~~F~~~d~~~~~~G~i~~~ef~~~-----l~~~~----------~~~~~~~~~l---f~~~d~~~~g~I 134 (257)
.-.+.+.|..+++. ++|.|+..++... +..+. .-.-+....+ |-.+|+|.+|.|
T Consensus 218 f~~~Y~~tvi~rIFy~~nrs--~tG~iti~el~~snll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~li 295 (493)
T KOG2562|consen 218 FQERYAETVIQRIFYYLNRS--RTGRITIQELLRSNLLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLI 295 (493)
T ss_pred HHHHHHHHHhhhhheeeCCc--cCCceeHHHHHHhHHHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhcccccccc
Confidence 22445567788877 9999999998663 11110 0001123444 778899999999
Q ss_pred cHHHHHHHHHhhCCCCChHHHHHHHHH----hhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCC
Q 025118 135 DFEEFVHALNVFHPYAPIEDKIDFAFR----LYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADID 210 (257)
Q Consensus 135 ~f~ef~~~~~~~~~~~~~~~~~~~~F~----~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~ 210 (257)
+-+++...... .....-+.++|. .+-.-.+|.+++++|.-++-+. -+ .-++.- ++..|+-+|.+
T Consensus 296 dk~~L~ry~d~----tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~---e~-k~t~~S----leYwFrclDld 363 (493)
T KOG2562|consen 296 DKEDLKRYGDH----TLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAE---ED-KDTPAS----LEYWFRCLDLD 363 (493)
T ss_pred CHHHHHHHhcc----chhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHh---cc-CCCccc----hhhheeeeecc
Confidence 99998876542 233556788898 4555677999999999998543 22 222222 66678999999
Q ss_pred CCCcccHHHHHHHHHhChHHHH
Q 025118 211 KDGRINKEEWKEFAVRNPSLLK 232 (257)
Q Consensus 211 ~dg~I~~~eF~~~l~~~~~~~~ 232 (257)
++|.|+..|..-+....-....
T Consensus 364 ~~G~Lt~~el~~fyeeq~~rm~ 385 (493)
T KOG2562|consen 364 GDGILTLNELRYFYEEQLQRME 385 (493)
T ss_pred CCCcccHHHHHHHHHHHHHHHH
Confidence 9999999998877765443333
No 82
>PF14658 EF-hand_9: EF-hand domain
Probab=97.95 E-value=4.8e-05 Score=49.01 Aligned_cols=58 Identities=19% Similarity=0.347 Sum_probs=27.1
Q ss_pred HHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCC-CcccHHHHHHHH
Q 025118 123 FDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQT-GYIEREEVKQMV 180 (257)
Q Consensus 123 f~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~-G~I~~~e~~~~l 180 (257)
|..||.++.|.|.-.+++.++.......+.+.++..+.+.+|.+|. |.|+++.|..+|
T Consensus 4 F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM 62 (66)
T PF14658_consen 4 FDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIM 62 (66)
T ss_pred hhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHH
Confidence 4444444444444444444444443223444444444444444444 444444444444
No 83
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.93 E-value=1.5e-05 Score=56.77 Aligned_cols=68 Identities=24% Similarity=0.464 Sum_probs=46.8
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 025118 74 FSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNV 145 (257)
Q Consensus 74 ~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~ 145 (257)
++.+|...+...|..+++ ++|.|+-.+...++...++.. ..+..|++..|.+++|.++++||+.++..
T Consensus 4 ls~~e~~~y~~~F~~l~~---~~g~isg~~a~~~f~~S~L~~-~~L~~IW~LaD~~~dG~L~~~EF~iAm~L 71 (104)
T PF12763_consen 4 LSPEEKQKYDQIFQSLDP---QDGKISGDQAREFFMKSGLPR-DVLAQIWNLADIDNDGKLDFEEFAIAMHL 71 (104)
T ss_dssp -SCCHHHHHHHHHHCTSS---STTEEEHHHHHHHHHHTTSSH-HHHHHHHHHH-SSSSSEEEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCC---CCCeEeHHHHHHHHHHcCCCH-HHHHHHHhhhcCCCCCcCCHHHHHHHHHH
Confidence 455677777777877764 577888888777776544433 46677788888888888888888776654
No 84
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=97.89 E-value=0.00012 Score=71.96 Aligned_cols=101 Identities=23% Similarity=0.345 Sum_probs=78.3
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHhhC------CCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCC
Q 025118 118 FLDRVFDLFDEKKNGVIDFEEFVHALNVFH------PYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKL 191 (257)
Q Consensus 118 ~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~------~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~ 191 (257)
+...+|..||.+++|.+++.+|..++..+. ..+.++-.++.+..++|++.+|+|+..|..++|-+ .+...-+
T Consensus 2254 EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~--~ETeNI~ 2331 (2399)
T KOG0040|consen 2254 EFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMIS--KETENIL 2331 (2399)
T ss_pred HHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHh--ccccccc
Confidence 356799999999999999999999998874 12234458999999999999999999999998842 3333444
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q 025118 192 PDDLLEAIIDKTFADADIDKDGRINKEEWKEFAV 225 (257)
Q Consensus 192 s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~ 225 (257)
+.++ |...|+.+|. +..+|+.++...-|.
T Consensus 2332 s~~e----IE~AfraL~a-~~~yvtke~~~~~lt 2360 (2399)
T KOG0040|consen 2332 SSEE----IEDAFRALDA-GKPYVTKEELYQNLT 2360 (2399)
T ss_pred chHH----HHHHHHHhhc-CCccccHHHHHhcCC
Confidence 5555 5667788898 778899887755444
No 85
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.87 E-value=0.00036 Score=64.65 Aligned_cols=139 Identities=20% Similarity=0.346 Sum_probs=107.5
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhh------
Q 025118 73 RFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVF------ 146 (257)
Q Consensus 73 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~------ 146 (257)
.++..|-.+....|..+-+ +.|+|+-..-+.++.+.++.. +.+..|+..-|.|+||.++..||--+|...
T Consensus 9 avT~~Er~K~~~qF~~Lkp---~~gfitg~qArnfflqS~LP~-~VLaqIWALsDldkDGrmdi~EfSIAmkLi~lkLqG 84 (1118)
T KOG1029|consen 9 AVTDEERQKHDAQFGQLKP---GQGFITGDQARNFFLQSGLPT-PVLAQIWALSDLDKDGRMDIREFSIAMKLIKLKLQG 84 (1118)
T ss_pred ccchHHHHHHHHHHhccCC---CCCccchHhhhhhHHhcCCCh-HHHHHHHHhhhcCccccchHHHHHHHHHHHHHHhcC
Confidence 4567777888888998866 789999999999887655543 456779999999999999999998776655
Q ss_pred -------------------------------------------------------------------CC-----------
Q 025118 147 -------------------------------------------------------------------HP----------- 148 (257)
Q Consensus 147 -------------------------------------------------------------------~~----------- 148 (257)
.+
T Consensus 85 ~~lP~~LPPsll~~~~~~~p~~~p~fg~Gsls~~qpL~~a~p~~m~~s~v~~~Pv~vatvpS~~~~sl~nGplp~~~~sp 164 (1118)
T KOG1029|consen 85 IQLPPVLPPSLLKQPPRNAPSTWPGFGMGSLSYSQPLPPAAPRRMSSSPVVGPPVSVATVPSSRHNSLPNGPLPPTSNSP 164 (1118)
T ss_pred CcCCCCCChHHhccCCcCCCCCCCccCCCCcCcCCCCCcccccccCCCccCCCCcccccCCCCCCCCCCCCCCCCCCCCC
Confidence 00
Q ss_pred -------------------------CCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHH
Q 025118 149 -------------------------YAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKT 203 (257)
Q Consensus 149 -------------------------~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~ 203 (257)
.....-+.+.+|+.+|+..+|+++-..-+.++. ...++...+. .+
T Consensus 165 l~~~ss~se~~~~~~s~~q~~eWAVp~~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~------qS~Lpq~~LA----~I 234 (1118)
T KOG1029|consen 165 LPHDSSVSEGRPSIESVNQLEEWAVPQHNKLKYRQLFNALDKTRSGYLSGQQARSALG------QSGLPQNQLA----HI 234 (1118)
T ss_pred CCCCcchhhcCccchhhhhhhhccccchhhhHHHHHhhhcccccccccccHHHHHHHH------hcCCchhhHh----hh
Confidence 001123567899999999999999999999873 2345655544 44
Q ss_pred HHHcCCCCCCcccHHHHHHHHH
Q 025118 204 FADADIDKDGRINKEEWKEFAV 225 (257)
Q Consensus 204 f~~~d~~~dg~I~~~eF~~~l~ 225 (257)
+..-|.|+||+++-+||+-.|.
T Consensus 235 W~LsDvd~DGkL~~dEfilam~ 256 (1118)
T KOG1029|consen 235 WTLSDVDGDGKLSADEFILAMH 256 (1118)
T ss_pred eeeeccCCCCcccHHHHHHHHH
Confidence 5778999999999999987764
No 86
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.86 E-value=5e-05 Score=66.79 Aligned_cols=55 Identities=31% Similarity=0.468 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHH
Q 025118 116 NLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAIL 184 (257)
Q Consensus 116 ~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~ 184 (257)
...+..+|+.+|.+++|.|+++||+. +..+|+.+|.|++|.|+.+||..++...+
T Consensus 333 ~~~l~~aF~~~D~dgdG~Is~~E~~~--------------~~~~F~~~D~d~DG~Is~eEf~~~~~~~~ 387 (391)
T PRK12309 333 THAAQEIFRLYDLDGDGFITREEWLG--------------SDAVFDALDLNHDGKITPEEMRAGLGAAL 387 (391)
T ss_pred hHHHHHHHHHhCCCCCCcCcHHHHHH--------------HHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 45688999999999999999999952 46799999999999999999999987544
No 87
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.77 E-value=3.1e-05 Score=40.13 Aligned_cols=24 Identities=33% Similarity=0.627 Sum_probs=21.2
Q ss_pred HHHHHHcCCCCCCcccHHHHHHHH
Q 025118 201 DKTFADADIDKDGRINKEEWKEFA 224 (257)
Q Consensus 201 ~~~f~~~d~~~dg~I~~~eF~~~l 224 (257)
+.+|+.+|.|+||.|+++||.+++
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHHC
Confidence 457899999999999999999864
No 88
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=97.74 E-value=9.2e-06 Score=66.03 Aligned_cols=36 Identities=14% Similarity=0.072 Sum_probs=33.4
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~ 36 (257)
|++|||+++.|||..||+.|||+.|+++|||+..-.
T Consensus 239 is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~ 274 (355)
T KOG0033|consen 239 VTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRE 274 (355)
T ss_pred CCHHHHHHHHHHhccChhhhccHHHHhCCchhcchH
Confidence 689999999999999999999999999999997543
No 89
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.66 E-value=0.00018 Score=43.72 Aligned_cols=48 Identities=29% Similarity=0.551 Sum_probs=36.5
Q ss_pred ccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 171 IEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 171 I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
+++.|++.++ +..+..+++.. +..+|+.+|.+++|.+..+||++++..
T Consensus 2 msf~Evk~lL----k~~NI~~~~~y----A~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 2 MSFKEVKKLL----KMMNIEMDDEY----ARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp BEHHHHHHHH----HHTT----HHH----HHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCHHHHHHHH----HHHccCcCHHH----HHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 6889999998 56788888766 555779999999999999999998764
No 90
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=97.52 E-value=0.00033 Score=62.32 Aligned_cols=74 Identities=23% Similarity=0.351 Sum_probs=63.9
Q ss_pred hCCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCC----hHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 025118 71 ESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGE----NLFLDRVFDLFDEKKNGVIDFEEFVHALNVF 146 (257)
Q Consensus 71 ~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~----~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 146 (257)
.+.++..|++.+.+.|.++| + ++|+++..++..++....... ..+++.+....+.|.+|.|+|++|+.++-.+
T Consensus 10 ~~~~tq~El~~l~~kF~~~d-~--~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l 86 (627)
T KOG0046|consen 10 QSQLTQEELRELKEKFNKLD-D--QKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNL 86 (627)
T ss_pred cccccHHHHHHHHHHHHhhc-C--CCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhh
Confidence 36789999999999999999 6 999999999999987754333 6689999999999999999999999976655
Q ss_pred C
Q 025118 147 H 147 (257)
Q Consensus 147 ~ 147 (257)
.
T Consensus 87 ~ 87 (627)
T KOG0046|consen 87 K 87 (627)
T ss_pred h
Confidence 3
No 91
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.51 E-value=0.00054 Score=48.86 Aligned_cols=65 Identities=29% Similarity=0.428 Sum_probs=51.3
Q ss_pred ChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 151 PIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 151 ~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
....+...+|...|. ++|.|+.++.+.++. ...++.+.+.. ++...|.+++|+++++||+-+|.-
T Consensus 7 ~e~~~y~~~F~~l~~-~~g~isg~~a~~~f~------~S~L~~~~L~~----IW~LaD~~~dG~L~~~EF~iAm~L 71 (104)
T PF12763_consen 7 EEKQKYDQIFQSLDP-QDGKISGDQAREFFM------KSGLPRDVLAQ----IWNLADIDNDGKLDFEEFAIAMHL 71 (104)
T ss_dssp CHHHHHHHHHHCTSS-STTEEEHHHHHHHHH------HTTSSHHHHHH----HHHHH-SSSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC-CCCeEeHHHHHHHHH------HcCCCHHHHHH----HHhhhcCCCCCcCCHHHHHHHHHH
Confidence 345678899999984 689999999999883 34677766544 458899999999999999998764
No 92
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.51 E-value=5.1e-05 Score=55.08 Aligned_cols=64 Identities=23% Similarity=0.474 Sum_probs=43.5
Q ss_pred CChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHH
Q 025118 150 APIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEF 223 (257)
Q Consensus 150 ~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~ 223 (257)
......+...|..+|.|+||.|+..|+..+.+ .+ ...+ .-++.+|..+|.|+||.||..||..+
T Consensus 50 ~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~----~l--~~~e----~C~~~F~~~CD~n~d~~Is~~EW~~C 113 (113)
T PF10591_consen 50 SECKRVVHWKFCQLDRNKDGVLDRSELKPLRR----PL--MPPE----HCARPFFRSCDVNKDGKISLDEWCNC 113 (113)
T ss_dssp GGGHHHHHHHHHHH--T-SSEE-TTTTGGGGS----TT--STTG----GGHHHHHHHH-TT-SSSEEHHHHHHH
T ss_pred hhhhhhhhhhHhhhcCCCCCccCHHHHHHHHH----HH--hhhH----HHHHHHHHHcCCCCCCCCCHHHHccC
Confidence 34456788899999999999999999999852 11 1122 22566779999999999999999864
No 93
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=97.37 E-value=0.0055 Score=57.16 Aligned_cols=141 Identities=16% Similarity=0.230 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCC-hHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHH
Q 025118 77 NELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGE-NLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDK 155 (257)
Q Consensus 77 ~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~-~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~ 155 (257)
..-.-+...|+..|.+ ++|.++..+...++....... ...+.++|+..+..+++.+...+|........ ..+ +
T Consensus 133 ~~~~wi~~~~~~ad~~--~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~--~rp--e 206 (746)
T KOG0169|consen 133 RREHWIHSIFQEADKN--KNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELT--KRP--E 206 (746)
T ss_pred hHHHHHHHHHHHHccc--cccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhc--cCc--h
Confidence 3445566778888888 999999999999887654433 34678899999888999999999999887664 222 7
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhc-CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 156 IDFAFRLYDLRQTGYIEREEVKQMVAAILMESE-IKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 156 ~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g-~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
+..+|..+-.+ .++++.+++.+++... .| ...+.+.++++++.+-..-.....+.++.+.|.++|...
T Consensus 207 v~~~f~~~s~~-~~~ls~~~L~~Fl~~~---q~e~~~~~~~ae~ii~~~e~~k~~~~~~~l~ldgF~~yL~S~ 275 (746)
T KOG0169|consen 207 VYFLFVQYSHG-KEYLSTDDLLRFLEEE---QGEDGATLDEAEEIIERYEPSKEFRRHGLLSLDGFTRYLFSP 275 (746)
T ss_pred HHHHHHHHhCC-CCccCHHHHHHHHHHh---cccccccHHHHHHHHHHhhhhhhccccceecHHHHHHHhcCc
Confidence 88888888644 8999999999999643 22 456667778877544322234456789999999999774
No 94
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.30 E-value=0.0012 Score=40.08 Aligned_cols=47 Identities=21% Similarity=0.325 Sum_probs=28.9
Q ss_pred ccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q 025118 134 IDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 134 I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~ 181 (257)
++|.|....+..+. -...++-+..+|+..|++++|.+..+||..+++
T Consensus 2 msf~Evk~lLk~~N-I~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~ 48 (51)
T PF14788_consen 2 MSFKEVKKLLKMMN-IEMDDEYARQLFQECDKSQSGRLEGEEFEEFYK 48 (51)
T ss_dssp BEHHHHHHHHHHTT-----HHHHHHHHHHH-SSSSSEBEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHc-cCcCHHHHHHHHHHhcccCCCCccHHHHHHHHH
Confidence 56666666666654 455566677777777777777777777777664
No 95
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.24 E-value=0.00053 Score=37.39 Aligned_cols=26 Identities=42% Similarity=0.786 Sum_probs=18.1
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHH
Q 025118 119 LDRVFDLFDEKKNGVIDFEEFVHALN 144 (257)
Q Consensus 119 ~~~lf~~~d~~~~g~I~f~ef~~~~~ 144 (257)
++.+|+.+|.|++|.|+++||..++.
T Consensus 2 l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 2 LREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 45677777777777777777777765
No 96
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=96.99 E-value=0.00058 Score=49.55 Aligned_cols=54 Identities=22% Similarity=0.305 Sum_probs=20.2
Q ss_pred HHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCCCCcccHHHHH
Q 025118 84 ELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFV 140 (257)
Q Consensus 84 ~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~ 140 (257)
=.|..+|.| +||.|+..|+..+...+ .....-+...++..|.|+||.|++.|+.
T Consensus 58 W~F~~LD~n--~d~~L~~~El~~l~~~l-~~~e~C~~~F~~~CD~n~d~~Is~~EW~ 111 (113)
T PF10591_consen 58 WKFCQLDRN--KDGVLDRSELKPLRRPL-MPPEHCARPFFRSCDVNKDGKISLDEWC 111 (113)
T ss_dssp HHHHHH--T---SSEE-TTTTGGGGSTT-STTGGGHHHHHHHH-TT-SSSEEHHHHH
T ss_pred hhHhhhcCC--CCCccCHHHHHHHHHHH-hhhHHHHHHHHHHcCCCCCCCCCHHHHc
Confidence 334455544 55555555544332211 1112223444445555555555555443
No 97
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=96.97 E-value=0.0029 Score=56.47 Aligned_cols=66 Identities=21% Similarity=0.405 Sum_probs=51.8
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q 025118 154 DKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAV 225 (257)
Q Consensus 154 ~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~ 225 (257)
..++..|...| |++|+|+..|+..++.. .+... ...+++.++.+....+.|.+|.|++++|+..+.
T Consensus 19 ~~l~~kF~~~d-~~~G~v~~~~l~~~f~k----~~~~~-g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~ 84 (627)
T KOG0046|consen 19 RELKEKFNKLD-DQKGYVTVYELPDAFKK----AKLPL-GYFVREEIKEILGEVGVDADGRVEFEEFVGIFL 84 (627)
T ss_pred HHHHHHHHhhc-CCCCeeehHHhHHHHHH----hcccc-cchhHHHHHHHHhccCCCcCCccCHHHHHHHHH
Confidence 35778999999 99999999999999853 34333 334455566666899999999999999999543
No 98
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=96.95 E-value=0.0025 Score=58.28 Aligned_cols=112 Identities=23% Similarity=0.404 Sum_probs=81.8
Q ss_pred HhHHHHHHhCCCCHHHHHHHHHHHHhhhc-ccccCC-----------CCCHHHHHHHHhcCCC--CChHHHHHHHHHHcC
Q 025118 63 GDLARLAAESRFSVNELEALSELYKNLSC-SIIKDG-----------LIHKEELQVALFQAPY--GENLFLDRVFDLFDE 128 (257)
Q Consensus 63 ~~~~~~~~~~~~~~~ei~~l~~~F~~~d~-~~~~~G-----------~i~~~ef~~~l~~~~~--~~~~~~~~lf~~~d~ 128 (257)
..++.+...+.++..++..++.+|..-=. +..+-| +|+...|...+..... .....+.++|+..|.
T Consensus 487 t~lrs~~~~~~lt~~dL~~lYd~f~~e~~~~~~~~~~~~p~~~~~eqyi~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~ 566 (671)
T KOG4347|consen 487 TILRSVVQTTSLTNTDLENLYDLFKEEHLTNSIGLGRSDPDFEAFEQYIDYAQFLEVFRELLPWAVSLIFLERLFRLLDD 566 (671)
T ss_pred HHHHhhcccCccCHHHHHHHHHHHHHHHhccCcccCCCCCCchHHHHHHHHhhHHHHhhccCchhHHHHHHHHHHHhccc
Confidence 34666677788999999999999974311 100111 1233333333322111 123468999999999
Q ss_pred CCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHH
Q 025118 129 KKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEV 176 (257)
Q Consensus 129 ~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~ 176 (257)
+.+|.|+|.+++.++..+. .+..-++++.+|+++|.+++ ..+.++.
T Consensus 567 s~~g~Ltf~~lv~gL~~l~-~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 567 SMTGLLTFKDLVSGLSILK-AGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred CCcceeEHHHHHHHHHHHH-hhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 9999999999999999997 77788999999999999999 9999988
No 99
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=96.94 E-value=0.0037 Score=42.57 Aligned_cols=69 Identities=23% Similarity=0.428 Sum_probs=51.2
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcC-CCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 155 KIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEI-KLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 155 ~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~-~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
++..+|..|-. +.+.|+.++|.+++. ..-+. ..+.+++..++...-..-.....+.+++++|..+|...
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~---~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~ 70 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLR---EEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSD 70 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHH---HTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHST
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHH---HHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCC
Confidence 36789999955 789999999999995 33444 56888888888653322222356899999999999875
No 100
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=96.91 E-value=0.0048 Score=42.55 Aligned_cols=79 Identities=15% Similarity=0.310 Sum_probs=52.9
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHHHH---HhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChH
Q 025118 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAIL---MESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPS 229 (257)
Q Consensus 153 ~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~---~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~ 229 (257)
.++.+.+|..+ .|++|.++...|..+++.+. ...|+..+-.-++..++.+|... .....|+-++|+.|+...|.
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~~ePq 78 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLDWLMSEPQ 78 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHHHHHT--T
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--CCCCccCHHHHHHHHHhCCC
Confidence 47899999999 68999999999999998764 33454444334777889999875 34567999999999999986
Q ss_pred HHHhc
Q 025118 230 LLKNM 234 (257)
Q Consensus 230 ~~~~~ 234 (257)
.+-++
T Consensus 79 ~lVWL 83 (90)
T PF09069_consen 79 SLVWL 83 (90)
T ss_dssp TTTHH
T ss_pred eeeHH
Confidence 55444
No 101
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=96.82 E-value=0.0021 Score=54.05 Aligned_cols=98 Identities=13% Similarity=0.127 Sum_probs=80.2
Q ss_pred HHHHHHHHhhhcccccCCCCCHHHHHHHHhcC--CCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHH
Q 025118 80 EALSELYKNLSCSIIKDGLIHKEELQVALFQA--PYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKID 157 (257)
Q Consensus 80 ~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~--~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~ 157 (257)
..+...|..+|.+ ++|.++..|-...+.-+ +......++-.|..|+..-||.++-.+|-.++.... +...-++-
T Consensus 259 d~l~~~f~LFde~--~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~l--gv~~l~v~ 334 (412)
T KOG4666|consen 259 DKLAPTFMLFDEG--TTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVL--GVEVLRVP 334 (412)
T ss_pred hhhhhhhheecCC--CCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhc--Ccceeecc
Confidence 5667788888887 99999999987766542 344456789999999999999999999888877663 45555677
Q ss_pred HHHHhhCCCCCCcccHHHHHHHHH
Q 025118 158 FAFRLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 158 ~~F~~~D~d~~G~I~~~e~~~~l~ 181 (257)
.+|...++..+|+|++++|+++..
T Consensus 335 ~lf~~i~q~d~~ki~~~~f~~fa~ 358 (412)
T KOG4666|consen 335 VLFPSIEQKDDPKIYASNFRKFAA 358 (412)
T ss_pred ccchhhhcccCcceeHHHHHHHHH
Confidence 899999999999999999999874
No 102
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=96.48 E-value=0.0032 Score=32.56 Aligned_cols=25 Identities=40% Similarity=0.639 Sum_probs=16.3
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHH
Q 025118 156 IDFAFRLYDLRQTGYIEREEVKQMV 180 (257)
Q Consensus 156 ~~~~F~~~D~d~~G~I~~~e~~~~l 180 (257)
++.+|+.+|.+++|.|+..+|..++
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~ 26 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLL 26 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHH
Confidence 3456666666666667766666665
No 103
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=96.43 E-value=0.0053 Score=31.66 Aligned_cols=26 Identities=35% Similarity=0.523 Sum_probs=22.6
Q ss_pred HHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 201 DKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 201 ~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
+.+|..+|.+++|.|++++|..++..
T Consensus 3 ~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 3 KEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 45678899999999999999999864
No 104
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=96.35 E-value=0.0011 Score=58.63 Aligned_cols=35 Identities=20% Similarity=0.272 Sum_probs=32.6
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccccch
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACIPLI 35 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~ 35 (257)
+|++||+++.+++..|++.|+|+.++++|||+...
T Consensus 265 is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 265 ISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred cCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 58899999999999999999999999999999653
No 105
>PLN02952 phosphoinositide phospholipase C
Probab=96.22 E-value=0.071 Score=49.58 Aligned_cols=94 Identities=11% Similarity=0.207 Sum_probs=67.3
Q ss_pred CCCcccHHHHHHHHHhhC-CCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcC-CCCHHHHHHHHHHHHHHc
Q 025118 130 KNGVIDFEEFVHALNVFH-PYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEI-KLPDDLLEAIIDKTFADA 207 (257)
Q Consensus 130 ~~g~I~f~ef~~~~~~~~-~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~-~~s~~~~~~~~~~~f~~~ 207 (257)
+.|.++|.+|..+...+. .......++..+|..|-. +.+.++.++|.+++.. .-+. ..+.+.++.++..++...
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~-~~~~mt~~~l~~FL~~---~Q~e~~~~~~~~~~i~~~~~~~~ 88 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSV-GGGHMGADQLRRFLVL---HQDELDCTLAEAQRIVEEVINRR 88 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhC-CCCccCHHHHHHHHHH---hCCCcCCCHHHHHHHHHHHHhhc
Confidence 468999999988877664 223467899999999964 4478999999999963 3333 356677777776555432
Q ss_pred C---CCCCCcccHHHHHHHHHhC
Q 025118 208 D---IDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 208 d---~~~dg~I~~~eF~~~l~~~ 227 (257)
. ..+.+.++++.|..+|...
T Consensus 89 ~~~~~~~~~~l~~~~F~~~l~s~ 111 (599)
T PLN02952 89 HHVTRYTRHGLNLDDFFHFLLYD 111 (599)
T ss_pred cccccccccCcCHHHHHHHHcCc
Confidence 2 1233569999999999853
No 106
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=95.84 E-value=0.094 Score=40.55 Aligned_cols=138 Identities=16% Similarity=0.098 Sum_probs=72.3
Q ss_pred HHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHH--HHHHHHHc--CCCCCcccHHHHHHHHHhh----------
Q 025118 81 ALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFL--DRVFDLFD--EKKNGVIDFEEFVHALNVF---------- 146 (257)
Q Consensus 81 ~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~--~~lf~~~d--~~~~g~I~f~ef~~~~~~~---------- 146 (257)
.|.+-..-+|+| +||.|.+-|-...++.++.+.-..+ -.++...= ....+.+-=.-|.-.+..+
T Consensus 8 ~LQqHvaFFDrd--~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg 85 (174)
T PF05042_consen 8 VLQQHVAFFDRD--KDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSG 85 (174)
T ss_pred HHhhhhceeCCC--CCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCcc
Confidence 344555566777 9999999988777776655432111 11111000 0011111000010001110
Q ss_pred ---CCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcC--CCCHHHHHHHHHHHHHHcCCCCCCcccHHHHH
Q 025118 147 ---HPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEI--KLPDDLLEAIIDKTFADADIDKDGRINKEEWK 221 (257)
Q Consensus 147 ---~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~--~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~ 221 (257)
....-..++.+.+|..|+..+.+.+|..|+.+++++-. .+.. .......| ...++. +-.+++|.+..|+..
T Consensus 86 ~YD~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr-~~~D~~GW~a~~~E--W~~~y~-L~~d~dG~l~Ke~iR 161 (174)
T PF05042_consen 86 AYDTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKGNR-NANDPFGWFAAFFE--WGALYI-LAKDKDGFLSKEDIR 161 (174)
T ss_pred ccccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhcc-ccCCcchhhhhhhH--HHHHHH-HHcCcCCcEeHHHHh
Confidence 11233468899999999999999999999999996410 1110 01111222 112332 235678999988877
Q ss_pred HHH
Q 025118 222 EFA 224 (257)
Q Consensus 222 ~~l 224 (257)
.++
T Consensus 162 ~vY 164 (174)
T PF05042_consen 162 GVY 164 (174)
T ss_pred hhc
Confidence 654
No 107
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=95.69 E-value=0.0038 Score=54.54 Aligned_cols=36 Identities=8% Similarity=-0.057 Sum_probs=33.7
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~ 36 (257)
||.||.+++-+||-+||+.|+|+.|+++|||+...+
T Consensus 409 Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 409 ISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred hhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence 688999999999999999999999999999997655
No 108
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=95.60 E-value=0.019 Score=53.59 Aligned_cols=120 Identities=8% Similarity=0.042 Sum_probs=71.7
Q ss_pred hhhhHhhhhccCCCCCccccccchhhccccchhHHHHHHHHhhhccccCCCCcCCCCChHhHHHHHHhCCCCHHHHHHHH
Q 025118 4 SANRSFLRAFDYDGSSSLTFGERICAACIPLIAIIEAVVITVASCFRYRPPVQKCRFDVGDLARLAAESRFSVNELEALS 83 (257)
Q Consensus 4 ~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~l~ 83 (257)
.+.+++.+||..||+.|+|+.+++.|||+...... ....... ............ ..+-.+.+.
T Consensus 425 ~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~------~~~~~~~----~~~~~~~~~~~~-------~~~~~~~~~ 487 (566)
T PLN03225 425 AGWELLKSMMRFKGRQRISAKAALAHPYFDREGLL------GLSVMQN----LRLQLFRATQQD-------YGEAAAWVV 487 (566)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCcc------ccccccc----cccccchhhHHH-------HHHHHHHHH
Confidence 35589999999999999999999999999654311 0000000 000000000000 011123334
Q ss_pred HHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHH--HHHHHHHcCCCCCcccHHHHHHHH
Q 025118 84 ELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFL--DRVFDLFDEKKNGVIDFEEFVHAL 143 (257)
Q Consensus 84 ~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~--~~lf~~~d~~~~g~I~f~ef~~~~ 143 (257)
....+-.++ .+|..+..+++...... ....... ..+-+.++.++.|..++.+++...
T Consensus 488 ~~~~~~~~~--~~~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (566)
T PLN03225 488 FLMAKSGTE--KEGGFTEAQLQELREKE-PKKKGSAQRNALASALRLQRKGVKTVARTVDEI 546 (566)
T ss_pred HHHHhcCCC--CCCCccHHHHHHhhhhc-CcchhhhhhhhHHHHHhhhhhhhhhhhhhhhcc
Confidence 444455555 78889999998866543 2222222 347888889999999999988754
No 109
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=95.53 E-value=0.0086 Score=50.50 Aligned_cols=68 Identities=24% Similarity=0.338 Sum_probs=53.3
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChH
Q 025118 155 KIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPS 229 (257)
Q Consensus 155 ~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~ 229 (257)
-+..-|..+|+|+++.|...|++-+=.-+ .....+.+-.+.+|+.+|.|+|-.|+++||..+|...+.
T Consensus 334 vv~w~F~qLdkN~nn~i~rrEwKpFK~~l-------~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~~~~ 401 (421)
T KOG4578|consen 334 VVHWYFNQLDKNSNNDIERREWKPFKRVL-------LKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGVEKE 401 (421)
T ss_pred eeeeeeeeecccccCccchhhcchHHHHH-------HhhccHHHHhhhcchhcccCCCceecHHHHhhhhccccc
Confidence 46778999999999999999987653221 122234555778889999999999999999999987553
No 110
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.37 E-value=0.099 Score=37.44 Aligned_cols=67 Identities=24% Similarity=0.394 Sum_probs=43.8
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcC-----------CCCChHH----HHHHHHHHcCCCCCcccH
Q 025118 72 SRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQA-----------PYGENLF----LDRVFDLFDEKKNGVIDF 136 (257)
Q Consensus 72 ~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~-----------~~~~~~~----~~~lf~~~d~~~~g~I~f 136 (257)
..+++++++- ..|.-.|.| ++|.|+--|+..++... |+....+ +..+.+--|.|+||.|+|
T Consensus 61 a~mtpeqlqf--HYF~MHDld--knn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDY 136 (144)
T KOG4065|consen 61 AKMTPEQLQF--HYFSMHDLD--KNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDY 136 (144)
T ss_pred hhCCHHHHhh--hhhhhhccC--cCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeH
Confidence 4556666653 457777777 89999999988877421 2222223 344445557788888888
Q ss_pred HHHHHH
Q 025118 137 EEFVHA 142 (257)
Q Consensus 137 ~ef~~~ 142 (257)
-||+..
T Consensus 137 gEflK~ 142 (144)
T KOG4065|consen 137 GEFLKR 142 (144)
T ss_pred HHHHhh
Confidence 888754
No 111
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=95.32 E-value=0.044 Score=46.67 Aligned_cols=100 Identities=19% Similarity=0.082 Sum_probs=75.2
Q ss_pred CCHHHHH----HHHHHHHhhhcccccCCCCCHHHHHHHHhcC----CCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 025118 74 FSVNELE----ALSELYKNLSCSIIKDGLIHKEELQVALFQA----PYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNV 145 (257)
Q Consensus 74 ~~~~ei~----~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~----~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~ 145 (257)
.+.+++. +|.+.|..+-.+ .++......+..+-+.+ +......+..+|+.+|.|.||.++-.|...+-
T Consensus 201 Ct~qeL~~lg~RL~dWF~~lhe~--s~~~~~~ss~~~~~~~~d~s~~p~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~-- 276 (434)
T KOG3555|consen 201 CTDQELRRLGNRLRDWFKALHED--SSQNDKTSSLHSAASGFDTSILPICKDSLGWMFNKLDTNYDLLLDQSELRAIE-- 276 (434)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhh--hhccCcchhhcccccccccccCcchhhhhhhhhhccccccccccCHHHhhhhh--
Confidence 4555554 456667777655 66666666665543322 22334578999999999999999999987754
Q ss_pred hCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q 025118 146 FHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMV 180 (257)
Q Consensus 146 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l 180 (257)
....+.-++..|+..|...||.|+-.|+-..+
T Consensus 277 ---ldknE~CikpFfnsCD~~kDg~iS~~EWC~CF 308 (434)
T KOG3555|consen 277 ---LDKNEACIKPFFNSCDTYKDGSISTNEWCYCF 308 (434)
T ss_pred ---ccCchhHHHHHHhhhcccccCccccchhhhhh
Confidence 45666789999999999999999999999887
No 112
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=94.93 E-value=0.098 Score=44.01 Aligned_cols=92 Identities=15% Similarity=0.216 Sum_probs=61.3
Q ss_pred cHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHh-hcCCCCHHHH-------HHHHHHHHHH
Q 025118 135 DFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILME-SEIKLPDDLL-------EAIIDKTFAD 206 (257)
Q Consensus 135 ~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~-~g~~~s~~~~-------~~~~~~~f~~ 206 (257)
|-+++...|...-......-.-+..|.+.|.|+||+++..|+..++..-+.. ..+.-.+++. -.|-..++..
T Consensus 225 SkdQLkEVWEE~DgLdpn~fdPKTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~ 304 (442)
T KOG3866|consen 225 SKDQLKEVWEESDGLDPNQFDPKTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQ 304 (442)
T ss_pred cHHHHHHHHHHhcCCCcccCCcchheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHh
Confidence 3455555555443233333345678999999999999999999998743322 2332222222 2344567788
Q ss_pred cCCCCCCcccHHHHHHHHHh
Q 025118 207 ADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 207 ~d~~~dg~I~~~eF~~~l~~ 226 (257)
+|.|.|..|+.+||++.-.+
T Consensus 305 vDtNqDRlvtleEFL~~t~~ 324 (442)
T KOG3866|consen 305 VDTNQDRLVTLEEFLNDTDN 324 (442)
T ss_pred cccchhhhhhHHHHHhhhhh
Confidence 99999999999999987554
No 113
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=94.87 E-value=0.011 Score=54.72 Aligned_cols=32 Identities=25% Similarity=0.284 Sum_probs=31.2
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccc
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACI 32 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~ 32 (257)
|+++|.+++.+|||+|+..|||.+|++.|||+
T Consensus 235 Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l 266 (786)
T KOG0588|consen 235 ISSEAQDLLRRMLDVDPSTRITTEEILKHPFL 266 (786)
T ss_pred CCHHHHHHHHHHhccCccccccHHHHhhCchh
Confidence 68999999999999999999999999999999
No 114
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=94.72 E-value=0.0079 Score=50.09 Aligned_cols=36 Identities=17% Similarity=0.214 Sum_probs=32.8
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~ 36 (257)
+|+.+|+++.+.|-+|+..|+|++|++.|||+...+
T Consensus 255 is~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~ 290 (411)
T KOG0599|consen 255 ISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIA 290 (411)
T ss_pred ccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHH
Confidence 478999999999999999999999999999996544
No 115
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=94.49 E-value=0.35 Score=44.40 Aligned_cols=152 Identities=14% Similarity=0.159 Sum_probs=96.6
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhc-CCCCChH----HHHHHHHHHcCCC--CCcccHHHHHHHHHh
Q 025118 73 RFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQ-APYGENL----FLDRVFDLFDEKK--NGVIDFEEFVHALNV 145 (257)
Q Consensus 73 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~-~~~~~~~----~~~~lf~~~d~~~--~g~I~f~ef~~~~~~ 145 (257)
.+...-++.|++.|...|.| .+|.++-.|+...=.. .+....+ .+....+..-++| ++.++..-|+.....
T Consensus 188 elkp~~v~al~RIFki~D~d--~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~l 265 (625)
T KOG1707|consen 188 ELKPRCVKALKRIFKISDSD--NDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTL 265 (625)
T ss_pred cccHHHHHHHHHHHhhhccc--cccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHH
Confidence 45567789999999999999 9999999998764322 2333222 2344444433332 456888888887766
Q ss_pred hCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhc--CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHH
Q 025118 146 FHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESE--IKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEF 223 (257)
Q Consensus 146 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g--~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~ 223 (257)
+. .....+..+.+.+.|--+.+-.++.+=+.--+ ....| ..+++.-+ +.+..+|..+|.|+||.++-+|+...
T Consensus 266 fi-ergr~EttW~iLR~fgY~DsleL~~~~l~p~~---~~~p~~s~ELs~~~~-~Fl~~~f~~~D~d~Dg~L~p~El~~L 340 (625)
T KOG1707|consen 266 FI-ERGRHETTWTILRKFGYTDSLELTDEYLPPRL---KVPPDQSVELSPKGY-RFLVDVFEKFDRDNDGALSPEELKDL 340 (625)
T ss_pred HH-HhccccchhhhhhhcCCcchhhhhhhhcCccc---cCCCCcceeccHHHH-HHHHHHHHhccCCCCCCcCHHHHHHH
Confidence 65 33444556667777755544433333222111 01122 34455444 44678999999999999999999998
Q ss_pred HHhChHHH
Q 025118 224 AVRNPSLL 231 (257)
Q Consensus 224 l~~~~~~~ 231 (257)
...-|...
T Consensus 341 F~~~P~~p 348 (625)
T KOG1707|consen 341 FSTAPGSP 348 (625)
T ss_pred hhhCCCCC
Confidence 88776543
No 116
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=94.47 E-value=0.12 Score=35.10 Aligned_cols=62 Identities=13% Similarity=0.223 Sum_probs=46.5
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHhhCCC-CChHHHHHHHHHhhCCC----CCCcccHHHHHHHHH
Q 025118 119 LDRVFDLFDEKKNGVIDFEEFVHALNVFHPY-APIEDKIDFAFRLYDLR----QTGYIEREEVKQMVA 181 (257)
Q Consensus 119 ~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~-~~~~~~~~~~F~~~D~d----~~G~I~~~e~~~~l~ 181 (257)
+..+|..+.. +.+.++.++|...+...... ....+.++.++..|..+ ..+.++.+.|..+|.
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~ 68 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLF 68 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHC
Confidence 5678888855 67788888888888776533 23577888888888654 468999999999883
No 117
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=94.42 E-value=0.26 Score=45.19 Aligned_cols=179 Identities=9% Similarity=0.066 Sum_probs=101.2
Q ss_pred HHHHHHHHhhhccccCCCCcCCCCChHhHHHHHHh---CCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhc-CC
Q 025118 37 IIEAVVITVASCFRYRPPVQKCRFDVGDLARLAAE---SRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQ-AP 112 (257)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~-~~ 112 (257)
+.++.+.++...+.-.+.+..+.++..++..++.. +.+...++..++..-+..-++--.++.++..-|...-.. ..
T Consensus 189 lkp~~v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lfie 268 (625)
T KOG1707|consen 189 LKPRCVKALKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTLFIE 268 (625)
T ss_pred ccHHHHHHHHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHH
Confidence 44566666777776677778888999999988875 667888998888888776543112222333333221000 01
Q ss_pred CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCC------ChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHh
Q 025118 113 YGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYA------PIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILME 186 (257)
Q Consensus 113 ~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~------~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~ 186 (257)
.+.......+.+.|..+.+-.++= +++.-.....+.. .--+.+..+|..||.|+||.++.+|+..++...
T Consensus 269 rgr~EttW~iLR~fgY~DsleL~~-~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~--- 344 (625)
T KOG1707|consen 269 RGRHETTWTILRKFGYTDSLELTD-EYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTA--- 344 (625)
T ss_pred hccccchhhhhhhcCCcchhhhhh-hhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhC---
Confidence 111122344566665554432321 2222111111111 113568899999999999999999999998421
Q ss_pred hcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 187 SEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 187 ~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
.+.......-. ...-.+..|.++|+-|+....-
T Consensus 345 P~~pW~~~~~~-------~~t~~~~~G~ltl~g~l~~WsL 377 (625)
T KOG1707|consen 345 PGSPWTSSPYK-------DSTVKNERGWLTLNGFLSQWSL 377 (625)
T ss_pred CCCCCCCCccc-------ccceecccceeehhhHHHHHHH
Confidence 11121110000 1112346799999999887643
No 118
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=94.33 E-value=0.058 Score=45.98 Aligned_cols=63 Identities=24% Similarity=0.415 Sum_probs=52.0
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 153 EDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 153 ~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
...+..+|..+|.|.||.++..|+..+-. ... |.-++.+|..+|..+||.|+-.||..++.+.
T Consensus 249 Kds~gWMFnklD~N~Dl~Ld~sEl~~I~l----------dkn--E~CikpFfnsCD~~kDg~iS~~EWC~CF~k~ 311 (434)
T KOG3555|consen 249 KDSLGWMFNKLDTNYDLLLDQSELRAIEL----------DKN--EACIKPFFNSCDTYKDGSISTNEWCYCFQKS 311 (434)
T ss_pred hhhhhhhhhccccccccccCHHHhhhhhc----------cCc--hhHHHHHHhhhcccccCccccchhhhhhccC
Confidence 35788999999999999999999999752 111 2237778899999999999999999998664
No 119
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=93.91 E-value=0.49 Score=44.67 Aligned_cols=64 Identities=28% Similarity=0.410 Sum_probs=56.2
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q 025118 117 LFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 117 ~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~ 181 (257)
.++..+|+..|.+++|.+++.+-..++..+. .......++..|+..|..++|.+..+++.++..
T Consensus 136 ~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n-~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~ 199 (746)
T KOG0169|consen 136 HWIHSIFQEADKNKNGHMSFDEVLDLLKQLN-VQLSESKARRLFKESDNSQTGKLEEEEFVKFRK 199 (746)
T ss_pred HHHHHHHHHHccccccccchhhHHHHHHHHH-HhhhHHHHHHHHHHHHhhccceehHHHHHHHHH
Confidence 4788999999999999999999999888775 556677889999999999999999999998764
No 120
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=93.80 E-value=0.42 Score=46.18 Aligned_cols=100 Identities=20% Similarity=0.170 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCCh------HHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCC
Q 025118 76 VNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGEN------LFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPY 149 (257)
Q Consensus 76 ~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~------~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~ 149 (257)
+..+..+...|+..+.. ..|.++.++|..+|..++.... .++.++.+..|.++.|.++|.+|...+..-...
T Consensus 743 Q~v~~ElrAle~~~~~~--d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e~ 820 (890)
T KOG0035|consen 743 QYVLDELRALENEQDKI--DGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYED 820 (890)
T ss_pred HHHHHHHHHHHhHHHHh--hcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhhhh
Confidence 34455566666666655 7889999999999987665443 235566667777788999999999999887656
Q ss_pred CChHHHHHHHHHhhCCCCCCcccHHHHHH
Q 025118 150 APIEDKIDFAFRLYDLRQTGYIEREEVKQ 178 (257)
Q Consensus 150 ~~~~~~~~~~F~~~D~d~~G~I~~~e~~~ 178 (257)
.....++..+|..+-++.. +|..+|+.+
T Consensus 821 l~~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 821 LDTELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred hcHHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 6677788888888866555 788888887
No 121
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.68 E-value=0.24 Score=46.94 Aligned_cols=94 Identities=24% Similarity=0.411 Sum_probs=76.2
Q ss_pred CCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCC
Q 025118 131 NGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADID 210 (257)
Q Consensus 131 ~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~ 210 (257)
+| ++++||. ....+.+.+++..|..+|. ++|.++.+++..++.................+....++...|.+
T Consensus 2 ~~-~~~~~~~------~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (646)
T KOG0039|consen 2 EG-ISFQELK------ITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANWLSLIKKQTEEYAALIMEELDPD 73 (646)
T ss_pred CC-cchhhhc------ccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhhhcccc
Confidence 56 8999998 2367888999999999998 99999999999999876544444444556667777788999999
Q ss_pred CCCcccHHHHHHHHHhChHHHH
Q 025118 211 KDGRINKEEWKEFAVRNPSLLK 232 (257)
Q Consensus 211 ~dg~I~~~eF~~~l~~~~~~~~ 232 (257)
..|.+.++++...+...|....
T Consensus 74 ~~~y~~~~~~~~ll~~~~~~~~ 95 (646)
T KOG0039|consen 74 HKGYITNEDLEILLLQIPTLLF 95 (646)
T ss_pred ccceeeecchhHHHHhchHHHH
Confidence 9999999999999998885444
No 122
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=93.64 E-value=0.023 Score=47.99 Aligned_cols=34 Identities=15% Similarity=0.152 Sum_probs=32.0
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
||..||+.+..+|..+|+.|+|..+++.|||+..
T Consensus 294 VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~ 327 (400)
T KOG0604|consen 294 VSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQ 327 (400)
T ss_pred HHHHHHHHHHHHhcCCchhheeHHHhhcCchhcc
Confidence 6889999999999999999999999999999954
No 123
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=93.27 E-value=0.12 Score=48.65 Aligned_cols=69 Identities=20% Similarity=0.363 Sum_probs=54.2
Q ss_pred CHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 025118 75 SVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVF 146 (257)
Q Consensus 75 ~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 146 (257)
......++.++|+.+|.. .+|+++-..-+.+|...++... .+..|+..-|.|+||.++-+||+.++...
T Consensus 190 p~~~klKY~QlFNa~Dkt--rsG~Lsg~qaR~aL~qS~Lpq~-~LA~IW~LsDvd~DGkL~~dEfilam~li 258 (1118)
T KOG1029|consen 190 PQHNKLKYRQLFNALDKT--RSGYLSGQQARSALGQSGLPQN-QLAHIWTLSDVDGDGKLSADEFILAMHLI 258 (1118)
T ss_pred cchhhhHHHHHhhhcccc--cccccccHHHHHHHHhcCCchh-hHhhheeeeccCCCCcccHHHHHHHHHHH
Confidence 344556778889999988 8999999999888887666554 34558888999999999999998776543
No 124
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.18 E-value=0.26 Score=44.18 Aligned_cols=72 Identities=14% Similarity=0.272 Sum_probs=57.2
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 025118 72 SRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVF 146 (257)
Q Consensus 72 ~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 146 (257)
..++.++.+++-..|..+-+| -+|+|+-.--+.++....+ .-+++..|+...|.++||-++..||++++..+
T Consensus 223 w~IT~EQReYYvnQFrtvQpD--p~gfisGsaAknFFtKSkl-pi~ELshIWeLsD~d~DGALtL~EFcAAfHLV 294 (737)
T KOG1955|consen 223 WQITPEQREYYVNQFRTVQPD--PHGFISGSAAKNFFTKSKL-PIEELSHIWELSDVDRDGALTLSEFCAAFHLV 294 (737)
T ss_pred cccCHHHHHHHHhhhhcccCC--cccccccHHHHhhhhhccC-chHHHHHHHhhcccCccccccHHHHHhhHhhe
Confidence 456778888888899998888 8999998877777654322 23467889999999999999999999987665
No 125
>KOG4286 consensus Dystrophin-like protein [Cell motility; Signal transduction mechanisms; Cytoskeleton]
Probab=93.06 E-value=1.7 Score=41.11 Aligned_cols=164 Identities=12% Similarity=0.159 Sum_probs=105.4
Q ss_pred CChHhHHHHHHhCCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhc--------CC------CCChHHHHHHHHH
Q 025118 60 FDVGDLARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQ--------AP------YGENLFLDRVFDL 125 (257)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~--------~~------~~~~~~~~~lf~~ 125 (257)
-+.-.+..+++..++..-.+.-+.+.|+..+.. .+.-.++..+...+|.. .+ +..+.-+..+++.
T Consensus 400 RtAmKlr~LQK~l~ldlv~ltl~l~if~~h~l~-~~~e~m~~~~~i~~L~~~y~~l~e~~g~~v~v~l~vD~~lN~llNv 478 (966)
T KOG4286|consen 400 RTAMKLRRLQKALCLDLLSLSLALDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHGNLVNVPLCVDMCLNWLLNV 478 (966)
T ss_pred HHHHHHHHHHHHHHhccccHHHHHHHHHHhccc-ccCcCCCHHHHHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHh
Confidence 333444555555555555666666777776543 12334555555554421 11 1112346788999
Q ss_pred HcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHH---Hhh-------cCCCCHHH
Q 025118 126 FDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAIL---MES-------EIKLPDDL 195 (257)
Q Consensus 126 ~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~---~~~-------g~~~s~~~ 195 (257)
||.-++|.|..-+|.-++..++ ....+++++.+|...-.++.-.+ ...|..++.... ... |.++..
T Consensus 479 yD~~R~g~irvls~ki~~i~lc-k~~leek~~ylF~~vA~~~sq~~-q~~l~lLL~dliqipr~lGE~aAfGgsNvep-- 554 (966)
T KOG4286|consen 479 YDTGRTGRIRVLSFKIGIISLC-KAHLEDKYRYLFKQVASSTSQCD-QRRLGLLLHDLIQIPRQLGEVAAFGGSNIEP-- 554 (966)
T ss_pred cccCCCcceEEeeehhhHHHHh-cchhHHHHHHHHHHHcCchhhHH-HHHHHHHHHHHHHHHHHHhHHHhhcCCCCCh--
Confidence 9999999999999999988887 66778899999999976665544 555666655432 111 223322
Q ss_pred HHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChHHHHh
Q 025118 196 LEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKN 233 (257)
Q Consensus 196 ~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~ 233 (257)
-++.+|+. .++-..|++..|..|+...|-.+-+
T Consensus 555 ---svrsCF~~--v~~~pei~~~~f~dw~~~epqsmVw 587 (966)
T KOG4286|consen 555 ---SVRSCFQF--VNNKPEIEAALFLDWMRLEPQSMVW 587 (966)
T ss_pred ---HHHHHHHh--cCCCCcchHHHHHHHhccCcchhhH
Confidence 36777763 4566789999999999988765444
No 126
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=92.78 E-value=0.87 Score=35.30 Aligned_cols=62 Identities=10% Similarity=0.191 Sum_probs=47.5
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCCh------HHHHHHHHHhhCCCCCCcccHHHHHHHH
Q 025118 118 FLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPI------EDKIDFAFRLYDLRQTGYIEREEVKQMV 180 (257)
Q Consensus 118 ~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~------~~~~~~~F~~~D~d~~G~I~~~e~~~~l 180 (257)
..+.||+.++..+.+.+|+.|...++.......++ .-+...+|.+. .+.+|.+..++++.+.
T Consensus 97 kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~-~d~dG~l~Ke~iR~vY 164 (174)
T PF05042_consen 97 KFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILA-KDKDGFLSKEDIRGVY 164 (174)
T ss_pred HHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHH-cCcCCcEeHHHHhhhc
Confidence 47899999999888899999999998875422222 23445566665 6778999999999986
No 127
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=92.33 E-value=1 Score=33.34 Aligned_cols=94 Identities=15% Similarity=0.276 Sum_probs=53.3
Q ss_pred hHHHHHHhCCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCCCCcccHH-----H
Q 025118 64 DLARLAAESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNGVIDFE-----E 138 (257)
Q Consensus 64 ~~~~~~~~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~-----e 138 (257)
.+..+++...+..-++..+.+.|.....+...+..++..++..+| ..+|........+..+.+ .
T Consensus 25 KLR~lQk~~~l~lv~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L-----------~~iy~~l~~~~p~~~~i~~~~v~~ 93 (127)
T PF09068_consen 25 KLRFLQKRLCLDLVDLSNVIEAFREHGLNQSNDSSLSVSQLETLL-----------SSIYEFLNKRLPTLHQIPSRPVDL 93 (127)
T ss_dssp HHHHHHHHTTGGG--HHHHHHHHHHTT---T-TSEEEHHHHHHHH-----------HHHHHHHHHHSTTS--HH-----H
T ss_pred HHHHHHHHHhheeeeHHHHHHHHHHcCCCcccCCCCCHHHHHHHH-----------HHHHHHHHHHCCCCCCCCchhHHH
Confidence 466677777787788888888888776552224568888887766 335544433333333322 2
Q ss_pred HHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q 025118 139 FVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMV 180 (257)
Q Consensus 139 f~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l 180 (257)
-... -+..+...||.+++|.|..-.|+..+
T Consensus 94 a~~L------------~ln~Ll~vyD~~rtG~I~vls~KvaL 123 (127)
T PF09068_consen 94 AVDL------------LLNWLLNVYDSQRTGKIRVLSFKVAL 123 (127)
T ss_dssp HHHH------------HHHHHHHHH-TT--SEEEHHHHHHHH
T ss_pred HHHH------------HHHHHHHHhCCCCCCeeehhHHHHHH
Confidence 2211 25667788888888888888887765
No 128
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=92.16 E-value=0.045 Score=46.72 Aligned_cols=36 Identities=14% Similarity=0.110 Sum_probs=33.8
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~ 36 (257)
||++||+++..+|-++...|+++..+++|||++...
T Consensus 333 IS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~ 368 (463)
T KOG0607|consen 333 ISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA 368 (463)
T ss_pred hhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence 689999999999999999999999999999998655
No 129
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=91.73 E-value=0.24 Score=45.81 Aligned_cols=78 Identities=21% Similarity=0.307 Sum_probs=57.4
Q ss_pred ccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCC
Q 025118 134 IDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDG 213 (257)
Q Consensus 134 I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg 213 (257)
|+|..|...+..+.+......-+..+|+.+|.+++|.|++.++..-+..+ ...+ ..+-++-+|+.+|++++
T Consensus 535 i~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l-------~~~~-~~ek~~l~y~lh~~p~~- 605 (671)
T KOG4347|consen 535 IDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSMTGLLTFKDLVSGLSIL-------KAGD-ALEKLKLLYKLHDPPAD- 605 (671)
T ss_pred HHHhhHHHHhhccCchhHHHHHHHHHHHhcccCCcceeEHHHHHHHHHHH-------Hhhh-HHHHHHHHHhhccCCcc-
Confidence 66677777776666555566678899999999999999999999988533 1222 22336678899999888
Q ss_pred cccHHHH
Q 025118 214 RINKEEW 220 (257)
Q Consensus 214 ~I~~~eF 220 (257)
..+.++-
T Consensus 606 ~~d~e~~ 612 (671)
T KOG4347|consen 606 ELDREEV 612 (671)
T ss_pred ccccccc
Confidence 7776654
No 130
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=91.73 E-value=0.26 Score=48.15 Aligned_cols=140 Identities=21% Similarity=0.334 Sum_probs=103.6
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhC---C-
Q 025118 73 RFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFH---P- 148 (257)
Q Consensus 73 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~---~- 148 (257)
.++.++...+...|..+.+ ++|.++-...+-+|....+. ...+.+++...|.+.+|.+++.||..++.... .
T Consensus 122 ~~~~qe~aky~q~f~s~~p---~~g~~sg~~~~pil~~s~Lp-~~~l~~iw~l~d~d~~g~Ld~~ef~~am~l~~~~l~~ 197 (847)
T KOG0998|consen 122 AITPQEQAKYDQIFRSLSP---SNGLLSGDKAKPILLNSKLP-SDVLGRIWELSDIDKDGNLDRDEFAVAMHLINDLLNG 197 (847)
T ss_pred CCCHHHHHHHHHHHhccCC---CCCccccchhhhhhhcCCCC-hhhhccccccccccccCCCChhhhhhhhhHHHHHhhc
Confidence 3567788888888999987 68999998888877654333 23456789999999999999999987755440 0
Q ss_pred ------------------------------------------------------------------------------CC
Q 025118 149 ------------------------------------------------------------------------------YA 150 (257)
Q Consensus 149 ------------------------------------------------------------------------------~~ 150 (257)
..
T Consensus 198 ~~~p~P~~~p~~lIpps~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~~~s~~~~~~~~~~q~~~s~~~~v 277 (847)
T KOG0998|consen 198 NSEPVPSRLPPSLIPPSKSELSANSSSKAIPFSQPFLASMASPTTLSSLVDLSALNSNPSLSSLSLASSMQLIVSWSPKV 277 (847)
T ss_pred ccCCCCccCCcccCCcchhcccccCcccccccccccccccccccccccccchhcccCCccccccccccccccccccCccc
Confidence 00
Q ss_pred C--hHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 151 P--IEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 151 ~--~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
. .......+|...|.+.+|.|+..+...++. . ..++...+.. ++...|..+.|.+++++|.-.+..
T Consensus 278 sp~d~~~~~~if~q~d~~~dG~I~s~~~~~~f~----~--~gl~~~~l~~----~w~l~d~~n~~~ls~~ef~~~~~~ 345 (847)
T KOG0998|consen 278 SPSDKQKYSKIFSQVDKDNDGSISSNEARNIFL----P--FGLSKPRLAH----VWLLADTQNTGTLSKDEFALAMHL 345 (847)
T ss_pred ChHHHHHHHHHHHhccccCCCcccccccccccc----c--CCCChhhhhh----hhhhcchhccCcccccccchhhhh
Confidence 1 124456689999999999999999999872 2 3444444444 447889999999999988766544
No 131
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=91.71 E-value=0.11 Score=34.03 Aligned_cols=61 Identities=16% Similarity=0.253 Sum_probs=38.6
Q ss_pred ChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCC---CCCcccHHHHHHH
Q 025118 151 PIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADID---KDGRINKEEWKEF 223 (257)
Q Consensus 151 ~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~---~dg~I~~~eF~~~ 223 (257)
.+.+.+..+|+.+ .++.++||.+||++.+ +.++.+-++..|=...+.+ ..|.++|..|.+-
T Consensus 3 ~s~eqv~~aFr~l-A~~KpyVT~~dLr~~l-----------~pe~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~ 66 (69)
T PF08726_consen 3 DSAEQVEEAFRAL-AGGKPYVTEEDLRRSL-----------TPEQAEYCISRMPPYEGPDGDAIPGAYDYESFTNS 66 (69)
T ss_dssp STCHHHHHHHHHH-CTSSSCEEHHHHHHHS------------CCCHHHHHCCSEC--SSS----TTEEECHHHHCC
T ss_pred CCHHHHHHHHHHH-HcCCCcccHHHHHHHc-----------CcHHHHHHHHHCcccCCCCcCCCCCCcCHHHHHHH
Confidence 3457899999999 7889999999999986 2233333332221222222 2267888888753
No 132
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=91.66 E-value=0.13 Score=43.62 Aligned_cols=63 Identities=17% Similarity=0.191 Sum_probs=51.2
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q 025118 119 LDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 119 ~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~ 181 (257)
+..-|..+|.|.++.|+-.|+.-+-..+........-.+.+|+..|.|+|-.|+++|++..+.
T Consensus 335 v~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~ 397 (421)
T KOG4578|consen 335 VHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLG 397 (421)
T ss_pred eeeeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhhc
Confidence 566799999999999998886655444443445666788999999999999999999999884
No 133
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=91.51 E-value=0.087 Score=45.92 Aligned_cols=32 Identities=16% Similarity=0.186 Sum_probs=29.6
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhcccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIP 33 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~ 33 (257)
++++++++.+||..||+.|+|+.|++.|||+.
T Consensus 288 ~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~ 319 (359)
T cd07876 288 TSQARDLLSKMLVIDPDKRISVDEALRHPYIT 319 (359)
T ss_pred chhHHHHHHHHhccCcccCCCHHHHhcCchhh
Confidence 46789999999999999999999999999984
No 134
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=91.28 E-value=0.089 Score=48.22 Aligned_cols=32 Identities=9% Similarity=0.099 Sum_probs=30.7
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccc
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACI 32 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~ 32 (257)
+|.+|++++-.+|++||..|+|+.++++|+++
T Consensus 241 ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 241 LSAEAKDLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred cCHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 47899999999999999999999999999998
No 135
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=91.02 E-value=0.1 Score=48.16 Aligned_cols=32 Identities=13% Similarity=0.059 Sum_probs=31.3
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccc
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACI 32 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~ 32 (257)
||.+||+++-.+|..||..|+++.+++.|+|+
T Consensus 535 vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 535 VSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred cCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 68999999999999999999999999999999
No 136
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=90.60 E-value=0.12 Score=45.15 Aligned_cols=32 Identities=19% Similarity=0.210 Sum_probs=29.5
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhcccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIP 33 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~ 33 (257)
++++++.+.+||..|++.|+|+.+++.|||+.
T Consensus 291 ~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~ 322 (364)
T cd07875 291 ASQARDLLSKMLVIDASKRISVDEALQHPYIN 322 (364)
T ss_pred cHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence 35788999999999999999999999999985
No 137
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=90.45 E-value=0.12 Score=44.95 Aligned_cols=32 Identities=16% Similarity=0.177 Sum_probs=29.5
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhcccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIP 33 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~ 33 (257)
++++++.+.++|..||+.|+|+.|++.|||+.
T Consensus 284 ~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~ 315 (355)
T cd07874 284 ASQARDLLSKMLVIDPAKRISVDEALQHPYIN 315 (355)
T ss_pred chHHHHHHHHHhcCCchhcCCHHHHhcCcchh
Confidence 45788999999999999999999999999995
No 138
>PTZ00036 glycogen synthase kinase; Provisional
Probab=90.09 E-value=0.11 Score=46.89 Aligned_cols=33 Identities=12% Similarity=0.030 Sum_probs=30.5
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
+++|++++-++|..||..|+|+.|++.|||+..
T Consensus 324 ~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~ 356 (440)
T PTZ00036 324 PDDAINFISQFLKYEPLKRLNPIEALADPFFDD 356 (440)
T ss_pred CHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence 568999999999999999999999999999854
No 139
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=89.79 E-value=0.15 Score=43.92 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=31.2
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
+++.|-+++=+||-.||..|||++|++.||.+..
T Consensus 282 a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~ 315 (359)
T KOG0660|consen 282 ANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP 315 (359)
T ss_pred CCHHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence 4789999999999999999999999999998743
No 140
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=89.57 E-value=0.17 Score=43.48 Aligned_cols=35 Identities=23% Similarity=0.212 Sum_probs=31.0
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccchh
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPLIA 36 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~ 36 (257)
++++.+.+.++|..|++.|+|+.|++.|||+....
T Consensus 263 ~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~ 297 (338)
T cd07859 263 DPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA 297 (338)
T ss_pred ChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcC
Confidence 46678999999999999999999999999996533
No 141
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=89.53 E-value=0.15 Score=44.77 Aligned_cols=34 Identities=9% Similarity=0.126 Sum_probs=31.1
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccch
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPLI 35 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~ 35 (257)
++++.+++.++|..||..|+|+.|++.|||+...
T Consensus 261 ~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 261 THEAVHLLCRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred CHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 5688999999999999999999999999999654
No 142
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=89.30 E-value=1.2 Score=42.84 Aligned_cols=30 Identities=10% Similarity=0.031 Sum_probs=28.6
Q ss_pred chhhhHhhhhccCCCCCccccccchhhccc
Q 025118 3 SSANRSFLRAFDYDGSSSLTFGERICAACI 32 (257)
Q Consensus 3 ~~a~~~~f~~ld~~~~~rls~~e~~~~~~~ 32 (257)
.+|++++-+|++.+|..|+||.+++.||.+
T Consensus 741 ~eA~dLI~~ml~~dP~~RPsa~~VL~HPlF 770 (903)
T KOG1027|consen 741 CEAKDLISRMLNPDPQLRPSATDVLNHPLF 770 (903)
T ss_pred HHHHHHHHHhcCCCcccCCCHHHHhCCCcc
Confidence 489999999999999999999999999977
No 143
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=88.77 E-value=0.19 Score=43.46 Aligned_cols=33 Identities=9% Similarity=0.113 Sum_probs=29.8
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
++.+.+++.+||..|+..|+|+.|++.|||+..
T Consensus 271 ~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~ 303 (343)
T cd07878 271 NPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ 303 (343)
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence 456788999999999999999999999999965
No 144
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=88.33 E-value=0.21 Score=44.82 Aligned_cols=33 Identities=9% Similarity=0.106 Sum_probs=30.5
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
.+.+|+++.++|++|+..||++.++..|||...
T Consensus 345 ~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 345 NEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR 377 (576)
T ss_pred cHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence 567999999999999999999999999999954
No 145
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=87.97 E-value=1.7 Score=33.22 Aligned_cols=65 Identities=17% Similarity=0.207 Sum_probs=43.3
Q ss_pred HHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCC----ChHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 025118 80 EALSELYKNLSCSIIKDGLIHKEELQVALFQAPYG----ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVF 146 (257)
Q Consensus 80 ~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~----~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 146 (257)
+.++..|..+-.. +...++-..|..++...++. ....+..+|..+-..+...|+|++|+.++..+
T Consensus 2 ~~~F~~f~~fG~~--~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~l 70 (154)
T PF05517_consen 2 EAVFKAFASFGKK--NGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAEL 70 (154)
T ss_dssp HHHHHHHHCSSTS--TSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCC--ccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHH
Confidence 3455555544433 55578888898888765432 24578889999876666779999999888655
No 146
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=87.51 E-value=0.39 Score=44.95 Aligned_cols=43 Identities=5% Similarity=-0.092 Sum_probs=34.6
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccchhHHHHHHHH
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPLIAIIEAVVIT 44 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~~~~~~~~~ 44 (257)
|++-++.+.++|++|++.|+++++++.|||+....+...+++.
T Consensus 262 s~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~SnK~ireL 304 (1187)
T KOG0579|consen 262 SRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPSNKMIREL 304 (1187)
T ss_pred hhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCcchHHHHH
Confidence 5677899999999999999999999999999755444444433
No 147
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=87.50 E-value=0.21 Score=43.38 Aligned_cols=32 Identities=13% Similarity=0.158 Sum_probs=28.8
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhcccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIP 33 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~ 33 (257)
++++.+.+.+||..||+.|+|+.|++.|||+.
T Consensus 284 ~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~ 315 (353)
T cd07850 284 ASQARDLLSKMLVIDPEKRISVDDALQHPYIN 315 (353)
T ss_pred hhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence 34678999999999999999999999999874
No 148
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=87.47 E-value=0.26 Score=43.50 Aligned_cols=33 Identities=15% Similarity=0.057 Sum_probs=31.8
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
|++|+.++.++|..|+..|+|+.+++.|||+..
T Consensus 248 S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 248 SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 789999999999999999999999999999976
No 149
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=87.11 E-value=0.28 Score=42.45 Aligned_cols=33 Identities=12% Similarity=0.109 Sum_probs=30.4
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
|.++.+.+.+||+.+|..|+|+.|++.|||+..
T Consensus 271 s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~ 303 (343)
T cd07851 271 NPLAIDLLEKMLVLDPDKRITAAEALAHPYLAE 303 (343)
T ss_pred CHHHHHHHHHhCCCChhhCCCHHHHhcCCCccc
Confidence 567889999999999999999999999999964
No 150
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=86.84 E-value=0.27 Score=42.41 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=30.1
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
+.++++.+.+++..+|..|+|+.+++.|||+..
T Consensus 264 ~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~ 296 (337)
T cd07858 264 NPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS 296 (337)
T ss_pred CHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence 567789999999999999999999999999964
No 151
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=86.42 E-value=0.29 Score=42.20 Aligned_cols=34 Identities=6% Similarity=-0.030 Sum_probs=30.4
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccch
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPLI 35 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~ 35 (257)
+.+.++++.++|..||+.|+|+.|++.|+|+...
T Consensus 272 ~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 272 GAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred CHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 4567899999999999999999999999998654
No 152
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=85.89 E-value=0.37 Score=41.69 Aligned_cols=33 Identities=12% Similarity=0.146 Sum_probs=30.1
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
+.++++.+.++|..||..|+|+.|++.|+|+..
T Consensus 273 ~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~ 305 (342)
T cd07854 273 NPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305 (342)
T ss_pred CHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence 567888999999999999999999999999964
No 153
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=85.78 E-value=2.2 Score=38.50 Aligned_cols=62 Identities=21% Similarity=0.333 Sum_probs=48.5
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q 025118 154 DKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAV 225 (257)
Q Consensus 154 ~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~ 225 (257)
+-...-|+.+-.|-.|+|+-.--+.++. ..+++-.+ +..+++..|.++||.+++.||+..+.
T Consensus 231 eYYvnQFrtvQpDp~gfisGsaAknFFt------KSklpi~E----LshIWeLsD~d~DGALtL~EFcAAfH 292 (737)
T KOG1955|consen 231 EYYVNQFRTVQPDPHGFISGSAAKNFFT------KSKLPIEE----LSHIWELSDVDRDGALTLSEFCAAFH 292 (737)
T ss_pred HHHHhhhhcccCCcccccccHHHHhhhh------hccCchHH----HHHHHhhcccCccccccHHHHHhhHh
Confidence 4455678888889999999998888874 23555555 44455889999999999999999874
No 154
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=85.51 E-value=1.6 Score=40.19 Aligned_cols=74 Identities=14% Similarity=0.186 Sum_probs=53.6
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCC-CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhC
Q 025118 72 SRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAP-YGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFH 147 (257)
Q Consensus 72 ~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~ 147 (257)
..+++.++...+..|..+|.| +.|+++..+...++.... ......++.+.+..|.+..|.+...||.+.+....
T Consensus 585 i~~~~~~~~~~~~rf~~lD~~--k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~ 659 (680)
T KOG0042|consen 585 IKLTPEDFLRRKTRFAFLDAD--KKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIK 659 (680)
T ss_pred cccCHHHHHHHHHHHHhhcch--HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHh
Confidence 345777788888888888877 777877777777776644 33445677777777777778888888777776664
No 155
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=85.35 E-value=1.6 Score=44.28 Aligned_cols=60 Identities=13% Similarity=0.292 Sum_probs=45.8
Q ss_pred HHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 158 FAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 158 ~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
..|+.||.||.|.|+..+|..++. .....+..+++-++ .-...|.+..++|++|+.-+..
T Consensus 4061 dtfkeydpdgkgiiskkdf~kame-----~~k~ytqse~dfll----scae~dend~~~y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDFHKAME-----GHKHYTQSEIDFLL----SCAEADENDMFDYEDFVDRFHE 4120 (5019)
T ss_pred ccchhcCCCCCccccHHHHHHHHh-----ccccchhHHHHHHH----HhhccCccccccHHHHHHHhcC
Confidence 468889999999999999999874 23556666655544 4455666778999999987754
No 156
>PLN02952 phosphoinositide phospholipase C
Probab=85.34 E-value=9.2 Score=35.98 Aligned_cols=86 Identities=7% Similarity=-0.045 Sum_probs=57.1
Q ss_pred cCCCCCHHHHHHHHhcCC---CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCC-ChHHHHHHHHHhh-------
Q 025118 95 KDGLIHKEELQVALFQAP---YGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYA-PIEDKIDFAFRLY------- 163 (257)
Q Consensus 95 ~~G~i~~~ef~~~l~~~~---~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~-~~~~~~~~~F~~~------- 163 (257)
++|.+++++|..+.+.+. ....+++..+|..+..++ +.++.++|...+...+... ...+.+..+|..+
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~-~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~ 91 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGG-GHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHV 91 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccc
Confidence 568899999976655432 224568888999886544 6899999999988876322 3345555565433
Q ss_pred CCCCCCcccHHHHHHHHH
Q 025118 164 DLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 164 D~d~~G~I~~~e~~~~l~ 181 (257)
...+.+.++.+.|..++.
T Consensus 92 ~~~~~~~l~~~~F~~~l~ 109 (599)
T PLN02952 92 TRYTRHGLNLDDFFHFLL 109 (599)
T ss_pred ccccccCcCHHHHHHHHc
Confidence 111334588888888874
No 157
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=85.28 E-value=0.39 Score=41.28 Aligned_cols=36 Identities=14% Similarity=0.112 Sum_probs=32.3
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~ 36 (257)
+|++|++.+.+++.+++..|.||.|++.||+.....
T Consensus 248 ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 248 LSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred cCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 478999999999999999999999999999886543
No 158
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=85.14 E-value=0.4 Score=41.28 Aligned_cols=33 Identities=12% Similarity=0.206 Sum_probs=30.1
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
++++.+.+.++++.++..|+|+.|++.|||+..
T Consensus 265 ~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~ 297 (336)
T cd07849 265 DPKALDLLDKMLTFNPHKRITVEEALAHPYLEQ 297 (336)
T ss_pred CcHHHHHHHHHcCCChhhCcCHHHHhcCccccc
Confidence 567889999999999999999999999999864
No 159
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=84.99 E-value=2.9 Score=40.71 Aligned_cols=71 Identities=14% Similarity=0.039 Sum_probs=55.0
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCH-HHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCh
Q 025118 154 DKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPD-DLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNP 228 (257)
Q Consensus 154 ~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~-~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~ 228 (257)
.+++..|+.+|+...|.++.+++.+.+ ...|...-. ++...-+..+....|+++.|++++.+|...|.+.-
T Consensus 747 ~ElrAle~~~~~~d~~aa~~e~~~~~L----mslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~ 818 (890)
T KOG0035|consen 747 DELRALENEQDKIDGGAASPEELLRCL----MSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREY 818 (890)
T ss_pred HHHHHHHhHHHHhhcccCCHHHHHHHH----HhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhh
Confidence 578999999999999999999999998 445655554 34444444555667777789999999999987653
No 160
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=84.44 E-value=1.6 Score=32.71 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=25.6
Q ss_pred CCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCC
Q 025118 131 NGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQ 167 (257)
Q Consensus 131 ~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~ 167 (257)
.+.|+|+.|...+..+.....+++-.+.+|..|-...
T Consensus 46 ~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~~~~ 82 (138)
T PF14513_consen 46 EEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQKKP 82 (138)
T ss_dssp TTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS----
T ss_pred CCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCcc
Confidence 4489999999999998877788888999999995544
No 161
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=83.93 E-value=7.1 Score=33.22 Aligned_cols=87 Identities=20% Similarity=0.381 Sum_probs=53.2
Q ss_pred HHhhhcccccCCCCCHHHHHHHHhc------CCCCChH-----------HHHHHHHHHcCCCCCcccHHHHHHHHHhhCC
Q 025118 86 YKNLSCSIIKDGLIHKEELQVALFQ------APYGENL-----------FLDRVFDLFDEKKNGVIDFEEFVHALNVFHP 148 (257)
Q Consensus 86 F~~~d~~~~~~G~i~~~ef~~~l~~------~~~~~~~-----------~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~ 148 (257)
|...|.| ++|+++..|+...+.. .+..... ....+++.+|.|.|..|+.+||+.......
T Consensus 250 F~LHD~N--sDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~ke- 326 (442)
T KOG3866|consen 250 FALHDLN--SDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDNKE- 326 (442)
T ss_pred eeeeccC--CcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhhcc-
Confidence 3344444 9999999988765432 1111110 145577888999999999999998766554
Q ss_pred CCChHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q 025118 149 YAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 149 ~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~ 181 (257)
...+.+.+. . .+..-.-|.+|++++=.
T Consensus 327 f~~p~e~WE----t--l~q~~~yTeEEL~~fE~ 353 (442)
T KOG3866|consen 327 FNPPKEEWE----T--LGQKKVYTEEELQQFER 353 (442)
T ss_pred cCCcchhhh----h--hcccccccHHHHHHHHH
Confidence 333333333 2 23445667777777654
No 162
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=83.90 E-value=0.47 Score=40.59 Aligned_cols=33 Identities=12% Similarity=0.171 Sum_probs=30.3
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
++++.+.+.++|..+++.|+|+.+++.|||+..
T Consensus 262 ~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 294 (330)
T cd07834 262 SPEAIDLLEKMLVFDPKKRITADEALAHPYLAQ 294 (330)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence 567889999999999999999999999999964
No 163
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=83.18 E-value=0.52 Score=40.80 Aligned_cols=33 Identities=15% Similarity=0.145 Sum_probs=29.9
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
++++.+.+.+||..||+.|+|+.+++.|+|+..
T Consensus 271 ~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~ 303 (343)
T cd07880 271 NPLAVNVLEKMLVLDAESRITAAEALAHPYFEE 303 (343)
T ss_pred ChHHHHHHHHHcCCChhhCCCHHHHhcCccHhh
Confidence 566889999999999999999999999999864
No 164
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=82.72 E-value=2.4 Score=39.05 Aligned_cols=64 Identities=16% Similarity=0.297 Sum_probs=51.8
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 155 KIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 155 ~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
..+.-|..+|.|+.|+++.++..++++ ..+...+++...+++ ++.|.+.+|.+...||.+++..
T Consensus 594 ~~~~rf~~lD~~k~~~~~i~~v~~vlk----~~~~~~d~~~~~~~l----~ea~~~~~g~v~l~e~~q~~s~ 657 (680)
T KOG0042|consen 594 RRKTRFAFLDADKKAYQAIADVLKVLK----SENVGWDEDRLHEEL----QEADENLNGFVELREFLQLMSA 657 (680)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHH----HhcCCCCHHHHHHHH----HHHHHhhcceeeHHHHHHHHHH
Confidence 456789999999999999999999985 445677777666655 6778888999999999988754
No 165
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=82.26 E-value=1.1 Score=39.56 Aligned_cols=35 Identities=3% Similarity=-0.019 Sum_probs=31.2
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccchh
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPLIA 36 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~ 36 (257)
+++|.+++-++|+.||..|||+++++.||.+....
T Consensus 354 ~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~ 388 (418)
T KOG1167|consen 354 PALLLDLLDKCLELNPQKRITAEDALKHPFFDEAD 388 (418)
T ss_pred cHHHHHHHHHHccCChhhcccHHHHhcCcCCcchh
Confidence 45899999999999999999999999999987443
No 166
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=82.24 E-value=2.6 Score=29.47 Aligned_cols=64 Identities=16% Similarity=0.328 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCC---CCcccHHHHHHHHHhhC
Q 025118 78 ELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKK---NGVIDFEEFVHALNVFH 147 (257)
Q Consensus 78 ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~---~g~I~f~ef~~~~~~~~ 147 (257)
.-..+...|+++. .+|+|....|..+++.. .....+..+|..+-..+ .+.|+-+|+...+..+.
T Consensus 28 ~W~~VE~RFd~La----~dG~L~rs~Fg~CIGM~--dSkeFA~eLFdALaRrr~i~~~~I~k~eL~efW~qis 94 (100)
T PF08414_consen 28 GWKEVEKRFDKLA----KDGLLPRSDFGECIGMK--DSKEFAGELFDALARRRGIKGDSITKDELKEFWEQIS 94 (100)
T ss_dssp -HHHHHHHHHHH-----BTTBEEGGGHHHHHT----S-HHHHHHHHHHHHHHTT--SSEE-HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhC----cCCcccHHHHHHhcCCc--ccHHHHHHHHHHHHHhcCCccCCcCHHHHHHHHHHhh
Confidence 4677788899987 57999999999998742 34567888888876532 35688888888876553
No 167
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=81.93 E-value=2.4 Score=31.79 Aligned_cols=74 Identities=14% Similarity=0.145 Sum_probs=44.2
Q ss_pred CCCCChHhHHHHHHhCCCCHHHHHHHHHHHHhhhc--ccccCCCCCHHHHHHHHhc-CCC-CChHHHHHHHHHHcCCC
Q 025118 57 KCRFDVGDLARLAAESRFSVNELEALSELYKNLSC--SIIKDGLIHKEELQVALFQ-APY-GENLFLDRVFDLFDEKK 130 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~ei~~l~~~F~~~d~--~~~~~G~i~~~ef~~~l~~-~~~-~~~~~~~~lf~~~d~~~ 130 (257)
-..+++.++.++++...++...++++.+.|+.--. .-+..+.|+.+-|+.+|.. +.. .....++.+|..|-...
T Consensus 5 ~~~lsp~eF~qLq~y~eys~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~~~~ 82 (138)
T PF14513_consen 5 WVSLSPEEFAQLQKYSEYSTKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQKKP 82 (138)
T ss_dssp -S-S-HHHHHHHHHHHHH----HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS----
T ss_pred eeccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCcc
Confidence 34689999999999888888999999999962111 0015678999999998876 332 33457899999886644
No 168
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=81.60 E-value=0.68 Score=40.02 Aligned_cols=33 Identities=15% Similarity=0.100 Sum_probs=29.6
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
+.++++++-+++..||..|+|+.+++.|+|+..
T Consensus 270 ~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~ 302 (342)
T cd07879 270 SPQAVDLLEKMLELDVDKRLTATEALEHPYFDS 302 (342)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhcCcchhh
Confidence 456789999999999999999999999999854
No 169
>KOG4301 consensus Beta-dystrobrevin [Cytoskeleton]
Probab=81.45 E-value=5.2 Score=34.41 Aligned_cols=121 Identities=16% Similarity=0.221 Sum_probs=78.7
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhc---CCCCHHH
Q 025118 119 LDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESE---IKLPDDL 195 (257)
Q Consensus 119 ~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g---~~~s~~~ 195 (257)
+.-+..++|..+-|.++--....++..++ .+...++++.+|.... |.+|.+..-.+.++++.+.+... ...+-..
T Consensus 112 laflLaA~ds~~~g~~~vfavkialatlc-~gk~~dklryIfs~is-ds~gim~~i~~~~fl~evlslpT~v~e~psfg~ 189 (434)
T KOG4301|consen 112 LAFLLAAEDSEGQGKQQVFAVKIALATLC-GGKIKDKLRYIFSLIS-DSRGIMQEIQRDQFLHEVLSLPTAVFEGPSFGY 189 (434)
T ss_pred HHHHHhhcCccCCCCceeecchhhhhhhc-cchHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHcCCchhhcCCCcch
Confidence 44566788999999998887777888777 7778899999999985 67888888888888865542211 1111111
Q ss_pred HHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChH--HHHhc-CCCCcccccccc
Q 025118 196 LEAIIDKTFADADIDKDGRINKEEWKEFAVRNPS--LLKNM-TLPYLTDITTIF 246 (257)
Q Consensus 196 ~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~--~~~~~-~~~~~~~~~~~~ 246 (257)
-+..++..|. .+.+++.+.|+..+..+|. -+.++ -|..++.+...|
T Consensus 190 te~~a~~cf~-----qqrKv~Ln~fldtl~sdp~p~cl~wlpLmhrla~v~nv~ 238 (434)
T KOG4301|consen 190 TELSARLCFL-----QQRKVELNQFLDTLMSDPPPQCLVWLPLMHRLATVENVF 238 (434)
T ss_pred HHHHHHHHHH-----HHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhcccC
Confidence 1222333332 3456899999999988864 33344 333445555555
No 170
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=80.53 E-value=0.83 Score=39.23 Aligned_cols=32 Identities=9% Similarity=0.189 Sum_probs=29.3
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhcccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIP 33 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~ 33 (257)
++++++.+.++|..||..|+|+.+++.|||+.
T Consensus 265 ~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~ 296 (332)
T cd07857 265 NPLALDLLEKLLAFDPTKRISVEEALEHPYLA 296 (332)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhcChhhh
Confidence 46788999999999999999999999999984
No 171
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=79.98 E-value=0.89 Score=38.97 Aligned_cols=34 Identities=18% Similarity=0.137 Sum_probs=30.8
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccch
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPLI 35 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~ 35 (257)
|++|.+++.++|..||-+|||+.+++.|+.+-..
T Consensus 310 ~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d 343 (438)
T KOG0666|consen 310 DPSALDLLQKLLTYDPIKRITAEQALEHPYFTED 343 (438)
T ss_pred CchHHHHHHHHhccCchhhccHHHHhcccccccC
Confidence 5679999999999999999999999999988544
No 172
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=79.95 E-value=0.7 Score=38.88 Aligned_cols=35 Identities=11% Similarity=0.011 Sum_probs=31.2
Q ss_pred CchhhhHhhhhccCCCCCccc-----cccchhhccccchh
Q 025118 2 DSSANRSFLRAFDYDGSSSLT-----FGERICAACIPLIA 36 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls-----~~e~~~~~~~~~~~ 36 (257)
++++++.+.++|..|+..|++ +.+++.|+|+....
T Consensus 222 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~ 261 (291)
T cd05612 222 DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVD 261 (291)
T ss_pred CHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCC
Confidence 568899999999999999995 99999999997544
No 173
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=79.56 E-value=0.81 Score=39.35 Aligned_cols=33 Identities=9% Similarity=0.168 Sum_probs=30.0
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
++++++.+.+++..++..|+|+.+++.|||+..
T Consensus 267 ~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~ 299 (334)
T cd07855 267 SPEALDLLSQMLQFDPEERITVEQALQHPFLAQ 299 (334)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHhChhhhh
Confidence 567888999999999999999999999999954
No 174
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=79.11 E-value=0.76 Score=39.52 Aligned_cols=35 Identities=11% Similarity=0.024 Sum_probs=30.9
Q ss_pred CCchhhhHhhhhccCCCCCccc-----cccchhhccccch
Q 025118 1 MDSSANRSFLRAFDYDGSSSLT-----FGERICAACIPLI 35 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls-----~~e~~~~~~~~~~ 35 (257)
+++++++++.++|..||..|++ +.+++.|||+...
T Consensus 238 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 238 FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 4678999999999999999997 6899999999654
No 175
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=79.10 E-value=0.76 Score=39.36 Aligned_cols=36 Identities=14% Similarity=0.086 Sum_probs=32.2
Q ss_pred CCchhhhHhhhhccCCCCCcc-----ccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSL-----TFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rl-----s~~e~~~~~~~~~~~ 36 (257)
+++++++.+.++|..|++.|+ ++.+++.|+|+....
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~ 258 (323)
T cd05571 218 LSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASIN 258 (323)
T ss_pred CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 467899999999999999999 899999999997654
No 176
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=79.07 E-value=0.88 Score=39.42 Aligned_cols=33 Identities=12% Similarity=0.131 Sum_probs=30.0
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
++++++.+-++|..|+..|+|+.+++.|+|+..
T Consensus 273 ~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~ 305 (345)
T cd07877 273 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 305 (345)
T ss_pred CHHHHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence 567888999999999999999999999999964
No 177
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=78.90 E-value=0.78 Score=39.28 Aligned_cols=31 Identities=13% Similarity=0.147 Sum_probs=28.3
Q ss_pred chhhhHhhhhccCCCCCccccccchhhcccc
Q 025118 3 SSANRSFLRAFDYDGSSSLTFGERICAACIP 33 (257)
Q Consensus 3 ~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~ 33 (257)
+-|.+++|+||=.|+.+|+|+++++.||.+.
T Consensus 284 ~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 284 SLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 3488999999999999999999999999775
No 178
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=78.86 E-value=0.77 Score=39.09 Aligned_cols=36 Identities=14% Similarity=0.134 Sum_probs=31.3
Q ss_pred CCchhhhHhhhhccCCCCCccc---cccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLT---FGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls---~~e~~~~~~~~~~~ 36 (257)
+++++++.+.++|..||..|++ +.|++.|||+....
T Consensus 216 ~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~ 254 (312)
T cd05585 216 FDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLS 254 (312)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCC
Confidence 4678999999999999999985 68899999997653
No 179
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=78.52 E-value=0.85 Score=39.22 Aligned_cols=36 Identities=14% Similarity=0.123 Sum_probs=31.0
Q ss_pred CCchhhhHhhhhccCCCCCccc------cccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLT------FGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls------~~e~~~~~~~~~~~ 36 (257)
+++++++.+.++|..||..|+| +.+++.|||+....
T Consensus 228 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~ 269 (329)
T cd05588 228 LSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNID 269 (329)
T ss_pred CCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCC
Confidence 3678899999999999999998 67899999996543
No 180
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=77.62 E-value=1.2 Score=38.42 Aligned_cols=32 Identities=9% Similarity=0.130 Sum_probs=29.2
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhcccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIP 33 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~ 33 (257)
|..+.+++-.+|-.||..|+||.++++|.|+.
T Consensus 334 se~g~~Lln~llt~dP~kR~tA~~~L~h~~F~ 365 (419)
T KOG0663|consen 334 SEQGFDLLNKLLTYDPGKRITAEDGLKHEYFR 365 (419)
T ss_pred chhHHHHHHHHhccCccccccHHHhhcccccc
Confidence 56788888999999999999999999999994
No 181
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=77.56 E-value=0.98 Score=38.60 Aligned_cols=36 Identities=8% Similarity=0.001 Sum_probs=31.6
Q ss_pred CCchhhhHhhhhccCCCCCcccc-----ccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTF-----GERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~-----~e~~~~~~~~~~~ 36 (257)
++.++++.+.++|..||+.|+|+ .+++.|||+....
T Consensus 219 ~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~ 259 (318)
T cd05570 219 LSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREID 259 (318)
T ss_pred CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence 36778999999999999999999 9999999996543
No 182
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=77.34 E-value=1.1 Score=39.67 Aligned_cols=35 Identities=17% Similarity=0.046 Sum_probs=31.8
Q ss_pred CCchhhhHhhhhccCCCCCccc----cccchhhccccch
Q 025118 1 MDSSANRSFLRAFDYDGSSSLT----FGERICAACIPLI 35 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls----~~e~~~~~~~~~~ 35 (257)
||+.|+++|.++|-+|++.|+- |.|+..||++...
T Consensus 360 vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gV 398 (459)
T KOG0610|consen 360 VSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGV 398 (459)
T ss_pred chhHHHHHHHHHhccChhhhhccccchHHhhcCccccCC
Confidence 5789999999999999999999 9999999988553
No 183
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=77.33 E-value=1.2 Score=38.17 Aligned_cols=36 Identities=11% Similarity=0.090 Sum_probs=31.4
Q ss_pred CCchhhhHhhhhccCCCCCccccc-cchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFG-ERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~-e~~~~~~~~~~~ 36 (257)
++.++++.+.++|..||..|+++. +++.|||+....
T Consensus 219 ~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05619 219 LTREAKDILVKLFVREPERRLGVKGDIRQHPFFREID 255 (316)
T ss_pred CCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence 356789999999999999999997 888999997654
No 184
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=77.00 E-value=1.1 Score=38.39 Aligned_cols=36 Identities=6% Similarity=-0.040 Sum_probs=31.6
Q ss_pred CCchhhhHhhhhccCCCCCcccc------ccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTF------GERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~------~e~~~~~~~~~~~ 36 (257)
++.++++.+.++|..||..|+++ .+++.|||+....
T Consensus 219 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~ 260 (320)
T cd05590 219 LSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELD 260 (320)
T ss_pred CCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCC
Confidence 36788999999999999999998 7899999997654
No 185
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=76.76 E-value=31 Score=26.33 Aligned_cols=82 Identities=16% Similarity=0.185 Sum_probs=53.3
Q ss_pred HHHHHHH---cCCCCCcccHHHHHHHHHhhC--CCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHH
Q 025118 120 DRVFDLF---DEKKNGVIDFEEFVHALNVFH--PYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDD 194 (257)
Q Consensus 120 ~~lf~~~---d~~~~g~I~f~ef~~~~~~~~--~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~ 194 (257)
+.+|..| ...+...++=..|..+|..-. ........+..+|..+-..+...|++++|..+|..+....+...+
T Consensus 2 ~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~~~~~~~~-- 79 (154)
T PF05517_consen 2 EAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELAEKKGKDKS-- 79 (154)
T ss_dssp HHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHHHHSCCCT--
T ss_pred HHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHHHhhcccc--
Confidence 3456555 333445688888888877643 344677889999999876666789999999999876555554333
Q ss_pred HHHHHHHHH
Q 025118 195 LLEAIIDKT 203 (257)
Q Consensus 195 ~~~~~~~~~ 203 (257)
.++++...+
T Consensus 80 ~~~~~~~kl 88 (154)
T PF05517_consen 80 SAEELKEKL 88 (154)
T ss_dssp HHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 444445443
No 186
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=76.66 E-value=1.1 Score=38.26 Aligned_cols=36 Identities=11% Similarity=0.101 Sum_probs=30.8
Q ss_pred CCchhhhHhhhhccCCCCCccccc-cchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFG-ERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~-e~~~~~~~~~~~ 36 (257)
++.++++.+.++|..||+.|+++. +++.|||+....
T Consensus 219 ~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~ 255 (316)
T cd05620 219 ITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN 255 (316)
T ss_pred CCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence 367889999999999999999984 788899997654
No 187
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=76.34 E-value=1.1 Score=38.47 Aligned_cols=36 Identities=11% Similarity=0.026 Sum_probs=31.1
Q ss_pred CCchhhhHhhhhccCCCCCcc-----ccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSL-----TFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rl-----s~~e~~~~~~~~~~~ 36 (257)
+++++++.+.++|..|++.|+ ++.+++.|||+....
T Consensus 234 ~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~ 274 (332)
T cd05614 234 IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLD 274 (332)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 367789999999999999999 677999999997543
No 188
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=76.24 E-value=4.3 Score=41.37 Aligned_cols=58 Identities=19% Similarity=0.340 Sum_probs=45.6
Q ss_pred HHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 025118 86 YKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNV 145 (257)
Q Consensus 86 F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~ 145 (257)
|..+|+| +.|.|+..+|..++.........+++-+......|.+...+|++|+.-+..
T Consensus 4063 fkeydpd--gkgiiskkdf~kame~~k~ytqse~dfllscae~dend~~~y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4063 FKEYDPD--GKGIISKKDFHKAMEGHKHYTQSEIDFLLSCAEADENDMFDYEDFVDRFHE 4120 (5019)
T ss_pred chhcCCC--CCccccHHHHHHHHhccccchhHHHHHHHHhhccCccccccHHHHHHHhcC
Confidence 4567777 999999999999987544445567777888888888889999999875543
No 189
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=76.13 E-value=2 Score=36.41 Aligned_cols=35 Identities=3% Similarity=-0.261 Sum_probs=30.6
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccchh
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPLIA 36 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~ 36 (257)
+.+.++.+.+++..+|..|+++.+++.|+|+....
T Consensus 240 ~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 240 SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred cHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 45678899999999999999999999999986543
No 190
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=75.30 E-value=1.3 Score=37.86 Aligned_cols=35 Identities=11% Similarity=0.092 Sum_probs=30.1
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~ 36 (257)
+++++++++..++. |++.|+|+.+++.|||+....
T Consensus 236 ~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~ 270 (330)
T cd05601 236 VSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKID 270 (330)
T ss_pred CCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCC
Confidence 36778889999997 999999999999999996543
No 191
>PLN02230 phosphoinositide phospholipase C 4
Probab=75.22 E-value=18 Score=34.10 Aligned_cols=73 Identities=11% Similarity=0.160 Sum_probs=50.2
Q ss_pred ChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhc-C-CCCHHHHHHHHHHHHHHcC---CCCCCcccHHHHHHHHH
Q 025118 151 PIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESE-I-KLPDDLLEAIIDKTFADAD---IDKDGRINKEEWKEFAV 225 (257)
Q Consensus 151 ~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g-~-~~s~~~~~~~~~~~f~~~d---~~~dg~I~~~eF~~~l~ 225 (257)
.+..+++.+|..|-.++ +.++.++|.++|.. .-+ . ..+.+.++.++..+..... .-+.+.++.+.|..+|.
T Consensus 26 ~p~~ei~~lf~~~s~~~-~~mt~~~l~~FL~~---~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~ 101 (598)
T PLN02230 26 GPVADVRDLFEKYADGD-AHMSPEQLQKLMAE---EGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLF 101 (598)
T ss_pred CCcHHHHHHHHHHhCCC-CccCHHHHHHHHHH---hCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHHc
Confidence 35678999999995444 89999999999853 222 2 3456667777765544332 22345799999999998
Q ss_pred hC
Q 025118 226 RN 227 (257)
Q Consensus 226 ~~ 227 (257)
..
T Consensus 102 s~ 103 (598)
T PLN02230 102 ST 103 (598)
T ss_pred Cc
Confidence 73
No 192
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=74.70 E-value=2.4 Score=35.41 Aligned_cols=37 Identities=8% Similarity=0.013 Sum_probs=32.9
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccchhHH
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPLIAII 38 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~~~ 38 (257)
|.+|.+++=.+|-.||..|+++.+++.|-|+-..+++
T Consensus 288 d~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 288 DDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred ChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence 5789999999999999999999999999999665544
No 193
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=74.00 E-value=1.3 Score=37.87 Aligned_cols=36 Identities=8% Similarity=-0.072 Sum_probs=31.7
Q ss_pred CCchhhhHhhhhccCCCCCcc-------ccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSL-------TFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rl-------s~~e~~~~~~~~~~~ 36 (257)
+++++++.+.++|..||+.|+ ++.+++.|||+....
T Consensus 219 ~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~ 261 (321)
T cd05591 219 LSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEID 261 (321)
T ss_pred CCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCC
Confidence 367899999999999999999 889999999996644
No 194
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=73.67 E-value=1.7 Score=37.36 Aligned_cols=33 Identities=15% Similarity=0.221 Sum_probs=29.6
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
+.+.++.+-+++..++..|+|+.+++.|+|+..
T Consensus 261 ~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~ 293 (328)
T cd07856 261 DPSAIDLLEKMLVFDPQKRISAAEALAHPYLAP 293 (328)
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHhcCCcccc
Confidence 457788999999999999999999999999954
No 195
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=73.38 E-value=44 Score=32.90 Aligned_cols=124 Identities=12% Similarity=0.220 Sum_probs=77.0
Q ss_pred ccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcC--CCCCc-----ccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCC
Q 025118 94 IKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDE--KKNGV-----IDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLR 166 (257)
Q Consensus 94 ~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~--~~~g~-----I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d 166 (257)
+..|+|-...+...+... ..+..+......... ++... .+|+.|..++..++ .+.++..+|..+-.+
T Consensus 160 n~~grip~knI~k~F~~~--k~~KrVe~al~~~gLp~~k~dsI~~d~f~~e~f~~~l~klc----pR~eie~iF~ki~~~ 233 (1189)
T KOG1265|consen 160 NFEGRIPVKNIIKTFSAD--KKEKRVEKALEACGLPSGKNDSIEPDDFTLEKFYRLLNKLC----PRPEIEEIFRKISGK 233 (1189)
T ss_pred cccccccHHHHHHHhhcC--CchhHHHHHHHhcCCCCCCcCccChhhccHHHHHHHHHhcC----CchhHHHHHHHhccC
Confidence 367777777766655421 111122222222211 22222 55666777776665 336789999999988
Q ss_pred CCCcccHHHHHHHHHHHHHh------hcCCCCHHHHHHHHHHHHHHcCCC----CCCcccHHHHHHHHHhC
Q 025118 167 QTGYIEREEVKQMVAAILME------SEIKLPDDLLEAIIDKTFADADID----KDGRINKEEWKEFAVRN 227 (257)
Q Consensus 167 ~~G~I~~~e~~~~l~~~~~~------~g~~~s~~~~~~~~~~~f~~~d~~----~dg~I~~~eF~~~l~~~ 227 (257)
+.-++|.++|..++..--.. .-+..++..+..+| ..+.+| .+|.++-+-|+.++...
T Consensus 234 ~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~li----ekyEp~~~~a~~gqms~dgf~ryl~gd 300 (1189)
T KOG1265|consen 234 KKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLI----EKYEPNSDNAEKGQMSTDGFVRYLMGD 300 (1189)
T ss_pred CCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHH----HHcCCchhhhhccccchhhhHHHhhCC
Confidence 88999999999998632100 11344556666666 666665 45899999999999874
No 196
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=73.21 E-value=2.1 Score=36.18 Aligned_cols=33 Identities=3% Similarity=-0.228 Sum_probs=28.9
Q ss_pred chhhhHhhhhccCCCCCccccccchhhccccch
Q 025118 3 SSANRSFLRAFDYDGSSSLTFGERICAACIPLI 35 (257)
Q Consensus 3 ~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~ 35 (257)
.+.+..+-+++..|+..|+|+.+++.|+|+...
T Consensus 241 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 273 (307)
T cd06607 241 DYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE 273 (307)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence 456788899999999999999999999998543
No 197
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=73.05 E-value=1.7 Score=37.42 Aligned_cols=33 Identities=12% Similarity=0.128 Sum_probs=29.5
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
+.+..+.+.+++..|++.|+|+.+++.|+|+..
T Consensus 268 ~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~ 300 (337)
T cd07852 268 SDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300 (337)
T ss_pred CHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence 456788999999999999999999999998854
No 198
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=72.92 E-value=53 Score=32.40 Aligned_cols=131 Identities=14% Similarity=0.134 Sum_probs=80.9
Q ss_pred hhHhhhhccCCCCCccccccchhhccccchhHHHHHHHHhhhccccCCCCcC---CCCChHhHHHHHHhCCC-CHHHHHH
Q 025118 6 NRSFLRAFDYDGSSSLTFGERICAACIPLIAIIEAVVITVASCFRYRPPVQK---CRFDVGDLARLAAESRF-SVNELEA 81 (257)
Q Consensus 6 ~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~ei~~ 81 (257)
|.+..-.+..|..|||....++.- ++..-....+..++.+|.-+...+.. ...+.+.+..+.. .+ ...+|++
T Consensus 150 K~~tklkmqvn~~grip~knI~k~--F~~~k~~KrVe~al~~~gLp~~k~dsI~~d~f~~e~f~~~l~--klcpR~eie~ 225 (1189)
T KOG1265|consen 150 KAHTKLKMQVNFEGRIPVKNIIKT--FSADKKEKRVEKALEACGLPSGKNDSIEPDDFTLEKFYRLLN--KLCPRPEIEE 225 (1189)
T ss_pred HHHHhhhhcccccccccHHHHHHH--hhcCCchhHHHHHHHhcCCCCCCcCccChhhccHHHHHHHHH--hcCCchhHHH
Confidence 344555678999999998885443 22222225566667776555443222 2344444444442 33 3367766
Q ss_pred HHHHHHhhhcccccCCCCCHHHHHHHHhcCC-----------CCChHHHHHHHHHHcCCC----CCcccHHHHHHHHHh
Q 025118 82 LSELYKNLSCSIIKDGLIHKEELQVALFQAP-----------YGENLFLDRVFDLFDEKK----NGVIDFEEFVHALNV 145 (257)
Q Consensus 82 l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~-----------~~~~~~~~~lf~~~d~~~----~g~I~f~ef~~~~~~ 145 (257)
++. ++..+ +.-+++.++|..+|.... ......+..++..+..|. +|.++-+-|+..+..
T Consensus 226 iF~---ki~~~--~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~~gqms~dgf~ryl~g 299 (1189)
T KOG1265|consen 226 IFR---KISGK--KKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAEKGQMSTDGFVRYLMG 299 (1189)
T ss_pred HHH---HhccC--CCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhhccccchhhhHHHhhC
Confidence 655 44433 556999999999986421 112335788888887775 589999999988765
No 199
>PHA03210 serine/threonine kinase US3; Provisional
Probab=72.78 E-value=1.7 Score=39.90 Aligned_cols=31 Identities=6% Similarity=0.068 Sum_probs=27.0
Q ss_pred hhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 4 SANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 4 ~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
...+.+.+||..|+..|+|+.|++.|||+..
T Consensus 429 ~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~ 459 (501)
T PHA03210 429 DFEYPLVKMLTFDWHLRPGAAELLALPLFSA 459 (501)
T ss_pred HHHHHHHHHhccCcccCcCHHHHhhChhhhc
Confidence 4455678999999999999999999999854
No 200
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=72.49 E-value=1.7 Score=38.12 Aligned_cols=35 Identities=6% Similarity=-0.140 Sum_probs=30.2
Q ss_pred CCchhhhHhhhhccCCCCC--ccccccchhhccccch
Q 025118 1 MDSSANRSFLRAFDYDGSS--SLTFGERICAACIPLI 35 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~--rls~~e~~~~~~~~~~ 35 (257)
+|+++++.+.++|..++.. |+|+.+++.|||+...
T Consensus 274 ~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 274 ISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred CCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 4778999999999877765 9999999999999653
No 201
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=72.17 E-value=1.5 Score=37.75 Aligned_cols=36 Identities=11% Similarity=0.045 Sum_probs=31.5
Q ss_pred CCchhhhHhhhhccCCCCCcc-----ccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSL-----TFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rl-----s~~e~~~~~~~~~~~ 36 (257)
+++++++.+.++|..|++.|+ ++.+++.|+|+....
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~ 258 (328)
T cd05593 218 LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVN 258 (328)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence 357889999999999999998 899999999997644
No 202
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=72.00 E-value=21 Score=26.30 Aligned_cols=71 Identities=15% Similarity=0.182 Sum_probs=44.4
Q ss_pred HHHHHHHhhCCCC--CCcccHHHHHHHHHHHHHhhc----CCCC------HHHHHHHHHHHHHHcCCCCCCcccHHHHHH
Q 025118 155 KIDFAFRLYDLRQ--TGYIEREEVKQMVAAILMESE----IKLP------DDLLEAIIDKTFADADIDKDGRINKEEWKE 222 (257)
Q Consensus 155 ~~~~~F~~~D~d~--~G~I~~~e~~~~l~~~~~~~g----~~~s------~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~ 222 (257)
.+..+|+....++ +..|+..++..++..++.... .... +..++-.+.-++..+|.++.|.|+--.|.-
T Consensus 42 ~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~~~~v~~a~~L~ln~Ll~vyD~~rtG~I~vls~Kv 121 (127)
T PF09068_consen 42 NVIEAFREHGLNQSNDSSLSVSQLETLLSSIYEFLNKRLPTLHQIPSRPVDLAVDLLLNWLLNVYDSQRTGKIRVLSFKV 121 (127)
T ss_dssp HHHHHHHHTT---T-TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH-----HHHHHHHHHHHHHH-TT--SEEEHHHHHH
T ss_pred HHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCchhHHHHHHHHHHHHHHHhCCCCCCeeehhHHHH
Confidence 3455666655443 367999999999998873322 1111 244555667788899999999999988876
Q ss_pred HHH
Q 025118 223 FAV 225 (257)
Q Consensus 223 ~l~ 225 (257)
.+.
T Consensus 122 aL~ 124 (127)
T PF09068_consen 122 ALI 124 (127)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 203
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=71.37 E-value=1.8 Score=36.26 Aligned_cols=35 Identities=11% Similarity=0.158 Sum_probs=31.2
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccccch
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACIPLI 35 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~ 35 (257)
.++.|-+++-.++..||..|+|+.|++.|+++...
T Consensus 253 as~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~ 287 (318)
T KOG0659|consen 253 ASSDALDLLSKMLTYNPKKRITASQALKHPYFKSL 287 (318)
T ss_pred ccHHHHHHHHhhhccCchhcccHHHHhcchhhhcC
Confidence 36778899999999999999999999999999643
No 204
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=71.12 E-value=1.9 Score=40.09 Aligned_cols=31 Identities=10% Similarity=0.153 Sum_probs=27.9
Q ss_pred hhHhhhhccCCCCCccccccchhhccccchh
Q 025118 6 NRSFLRAFDYDGSSSLTFGERICAACIPLIA 36 (257)
Q Consensus 6 ~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~ 36 (257)
.+.+.++|+.||..|+|+.+++.|||+....
T Consensus 479 ~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 479 IDFLKRCLEWDPAERITPAQALNHPFLTGTS 509 (586)
T ss_pred HHHHHHHhccCchhcCCHHHHhcCccccccc
Confidence 6789999999999999999999999996443
No 205
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=70.69 E-value=2.4 Score=38.34 Aligned_cols=33 Identities=15% Similarity=0.152 Sum_probs=30.5
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
+++|...+-++|.-||..|+||.+++.||.+..
T Consensus 264 s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~ 296 (538)
T KOG0661|consen 264 SSEAASLIERLLAWDPDKRPTASQALQHPFFQV 296 (538)
T ss_pred CHHHHHHHHHHhcCCCccCccHHHHhcCccccc
Confidence 678999999999999999999999999998853
No 206
>PLN00181 protein SPA1-RELATED; Provisional
Probab=70.32 E-value=4.6 Score=39.43 Aligned_cols=33 Identities=12% Similarity=0.014 Sum_probs=28.5
Q ss_pred chhhhHhhhhccCCCCCccccccchhhccccch
Q 025118 3 SSANRSFLRAFDYDGSSSLTFGERICAACIPLI 35 (257)
Q Consensus 3 ~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~ 35 (257)
+++...+.++|..+|..|+|+.|++.|||+...
T Consensus 239 ~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 239 PKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred HHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 356677888999999999999999999999653
No 207
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=70.30 E-value=1.9 Score=36.99 Aligned_cols=36 Identities=8% Similarity=-0.030 Sum_probs=30.8
Q ss_pred CCchhhhHhhhhccCCCCCcc----ccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSL----TFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rl----s~~e~~~~~~~~~~~ 36 (257)
+++++++.+.++|..|+..|+ ++.+++.|||+....
T Consensus 221 ~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~ 260 (330)
T cd05586 221 LSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADID 260 (330)
T ss_pred CCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence 367889999999999999998 678899999996543
No 208
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=69.91 E-value=17 Score=25.36 Aligned_cols=50 Identities=14% Similarity=0.076 Sum_probs=23.2
Q ss_pred cCCCCCHHHHHHHHh---c-CCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 025118 95 KDGLIHKEELQVALF---Q-APYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNV 145 (257)
Q Consensus 95 ~~G~i~~~ef~~~l~---~-~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~ 145 (257)
.||.++..|...+-. . .+. .......++..+........++.+|...+..
T Consensus 12 aDG~v~~~E~~~i~~~l~~~~~l-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 65 (104)
T cd07313 12 ADGEYDEEERAAIDRLLAERFGL-DAEEAAELLAEAEALEEEAPDLYEFTSLIKE 65 (104)
T ss_pred HcCCCCHHHHHHHHHHHHHHhCc-CHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 467777776654321 1 111 1223444444444444444555555555443
No 209
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=69.85 E-value=1.9 Score=36.83 Aligned_cols=36 Identities=11% Similarity=-0.045 Sum_probs=31.0
Q ss_pred CCchhhhHhhhhccCCCCCcccc-----ccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTF-----GERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~-----~e~~~~~~~~~~~ 36 (257)
+++++++.+.++|..||..|++. .+++.|||+....
T Consensus 224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~ 264 (324)
T cd05587 224 LSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRID 264 (324)
T ss_pred CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence 46789999999999999999987 6889999986543
No 210
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=69.55 E-value=1.6 Score=37.39 Aligned_cols=36 Identities=14% Similarity=0.067 Sum_probs=31.6
Q ss_pred CCchhhhHhhhhccCCCCCcc-----ccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSL-----TFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rl-----s~~e~~~~~~~~~~~ 36 (257)
+++++++.+-++|..|+..|+ ++.+++.|+|+....
T Consensus 219 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~ 259 (325)
T cd05594 219 LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIV 259 (325)
T ss_pred CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCC
Confidence 367889999999999999998 899999999997644
No 211
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=69.35 E-value=1.5 Score=37.63 Aligned_cols=36 Identities=14% Similarity=0.065 Sum_probs=31.9
Q ss_pred CCchhhhHhhhhccCCCCCcc-----ccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSL-----TFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rl-----s~~e~~~~~~~~~~~ 36 (257)
+++++++.+.++|..||..|+ ++.+++.|+|+....
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~ 258 (323)
T cd05595 218 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 258 (323)
T ss_pred CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCC
Confidence 367889999999999999999 899999999997654
No 212
>PLN02223 phosphoinositide phospholipase C
Probab=69.22 E-value=35 Score=31.67 Aligned_cols=76 Identities=12% Similarity=-0.064 Sum_probs=55.8
Q ss_pred ChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhc-CCCCHHHHHHHHHHHHHHcC----CCCCCcccHHHHHHHHH
Q 025118 151 PIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESE-IKLPDDLLEAIIDKTFADAD----IDKDGRINKEEWKEFAV 225 (257)
Q Consensus 151 ~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g-~~~s~~~~~~~~~~~f~~~d----~~~dg~I~~~eF~~~l~ 225 (257)
...+.++.+|..|- ++.|.++.+.+.+++.-+...-| ...+.++.+.+++.++.... ..+.+.++.+.|.++|.
T Consensus 13 ~~p~~v~~~f~~~~-~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~l~~~~f~~~L~ 91 (537)
T PLN02223 13 NQPDLILNFFGNEF-HGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRCLELDHLNEFLF 91 (537)
T ss_pred CCcHHHHHHHHHhh-cCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhccccCHHHHHHHhc
Confidence 35578999999994 77899999999998844334444 35667788888887775432 12336799999999998
Q ss_pred hC
Q 025118 226 RN 227 (257)
Q Consensus 226 ~~ 227 (257)
..
T Consensus 92 s~ 93 (537)
T PLN02223 92 ST 93 (537)
T ss_pred Cc
Confidence 74
No 213
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=69.08 E-value=30 Score=24.31 Aligned_cols=62 Identities=19% Similarity=0.324 Sum_probs=35.0
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 155 KIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 155 ~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
.++.-|..+-. +|++..++|-.++ |..-|.+-..++.+.+=+.-... .+.|+.+|+.++..+
T Consensus 31 ~VE~RFd~La~--dG~L~rs~Fg~CI-------GM~dSkeFA~eLFdALaRrr~i~-~~~I~k~eL~efW~q 92 (100)
T PF08414_consen 31 EVEKRFDKLAK--DGLLPRSDFGECI-------GMKDSKEFAGELFDALARRRGIK-GDSITKDELKEFWEQ 92 (100)
T ss_dssp HHHHHHHHH-B--TTBEEGGGHHHHH-------T--S-HHHHHHHHHHHHHHTT---SSEE-HHHHHHHHHH
T ss_pred HHHHHHHHhCc--CCcccHHHHHHhc-------CCcccHHHHHHHHHHHHHhcCCc-cCCcCHHHHHHHHHH
Confidence 45556666655 6888888888876 55555555555554444443433 456888887777654
No 214
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=68.81 E-value=1.9 Score=37.33 Aligned_cols=36 Identities=8% Similarity=0.003 Sum_probs=31.4
Q ss_pred CCchhhhHhhhhccCCCCCcc-----ccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSL-----TFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rl-----s~~e~~~~~~~~~~~ 36 (257)
+++++++.+.++|..++..|+ |+.+++.|||+....
T Consensus 251 ~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~ 291 (340)
T PTZ00426 251 LDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNID 291 (340)
T ss_pred CCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 367889999999999999996 899999999997543
No 215
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=68.70 E-value=2.3 Score=36.63 Aligned_cols=35 Identities=20% Similarity=0.116 Sum_probs=30.4
Q ss_pred CCchhhhHhhhhccCCCCCccc-cccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLT-FGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls-~~e~~~~~~~~~~~ 36 (257)
+++++.+++.+++. |+..|++ +.+++.|||+....
T Consensus 257 ~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~~ 292 (350)
T cd05573 257 VSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGID 292 (350)
T ss_pred CCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCCC
Confidence 36788899999996 9999999 99999999997544
No 216
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=68.55 E-value=2.5 Score=35.97 Aligned_cols=36 Identities=14% Similarity=0.125 Sum_probs=30.3
Q ss_pred CCchhhhHhhhhccCCCCCcccccc-----chhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGE-----RICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e-----~~~~~~~~~~~ 36 (257)
+++++++.+.++|..||..|+|+.+ ++.|+|+....
T Consensus 221 ~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~ 261 (318)
T cd05582 221 LSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTID 261 (318)
T ss_pred CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCC
Confidence 3678899999999999999999554 89999987644
No 217
>PLN02228 Phosphoinositide phospholipase C
Probab=67.91 E-value=24 Score=33.03 Aligned_cols=68 Identities=13% Similarity=0.211 Sum_probs=45.6
Q ss_pred ChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCC-CCHHHHHHHHHHHHHHcCCC----CCCcccHHHHHHHHH
Q 025118 151 PIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIK-LPDDLLEAIIDKTFADADID----KDGRINKEEWKEFAV 225 (257)
Q Consensus 151 ~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~-~s~~~~~~~~~~~f~~~d~~----~dg~I~~~eF~~~l~ 225 (257)
.+..++..+|..+-. ++.++.++|.+++.. .-|.. .+.+.+++++ ..+... ..|.++.+.|..+|.
T Consensus 21 ~~~~ei~~if~~~s~--~~~~t~~~~~~FL~~---~Q~~~~~~~~~~~~i~----~~~~~~~~~~~~~~~~~~gF~~yl~ 91 (567)
T PLN02228 21 EPPVSIKRLFEAYSR--NGKMSFDELLRFVSE---VQGERHAGLDYVQDIF----HSVKHHNVFHHHGLVHLNAFYRYLF 91 (567)
T ss_pred CCcHHHHHHHHHhcC--CCccCHHHHHHHHHH---hcCCccCCHHHHHHHH----HHhccchhhcccCccCHHHHHHHhc
Confidence 466788999988864 367999999998853 23332 3344455544 444322 346799999999998
Q ss_pred hC
Q 025118 226 RN 227 (257)
Q Consensus 226 ~~ 227 (257)
..
T Consensus 92 s~ 93 (567)
T PLN02228 92 SD 93 (567)
T ss_pred Cc
Confidence 64
No 218
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=67.49 E-value=2.4 Score=36.38 Aligned_cols=36 Identities=3% Similarity=-0.068 Sum_probs=32.0
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~ 36 (257)
+++++++++.++|..++..|+|+.+++.|||+....
T Consensus 229 ~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~ 264 (333)
T cd05600 229 LSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVD 264 (333)
T ss_pred cCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCC
Confidence 367889999999999999999999999999997643
No 219
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=67.09 E-value=26 Score=24.40 Aligned_cols=48 Identities=13% Similarity=0.087 Sum_probs=25.5
Q ss_pred cCCCCChHhHHHHHHh----CCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHH
Q 025118 56 QKCRFDVGDLARLAAE----SRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVAL 108 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~----~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l 108 (257)
..+.++..+...+... ..++..+...+...|... .....+..+|...+
T Consensus 12 aDG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~ 63 (104)
T cd07313 12 ADGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEAL-----EEEAPDLYEFTSLI 63 (104)
T ss_pred HcCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHH-----HHhCCCHHHHHHHH
Confidence 4556666666555432 355666666666666555 33334555554443
No 220
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=66.70 E-value=2.6 Score=38.29 Aligned_cols=30 Identities=10% Similarity=0.110 Sum_probs=25.8
Q ss_pred hHhhhhccCCCCCccccccchhhccccchh
Q 025118 7 RSFLRAFDYDGSSSLTFGERICAACIPLIA 36 (257)
Q Consensus 7 ~~~f~~ld~~~~~rls~~e~~~~~~~~~~~ 36 (257)
+.+.-||+.+|.+|+||++|+.|||+...+
T Consensus 528 dFL~PmLef~PeKR~tA~~cl~hPwLn~~~ 557 (590)
T KOG1290|consen 528 DFLSPMLEFDPEKRPTAAQCLKHPWLNPVA 557 (590)
T ss_pred HHHHHHHhcCccccccHHHHhcCccccCCC
Confidence 456679999999999999999999996543
No 221
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=66.64 E-value=2.7 Score=36.09 Aligned_cols=36 Identities=11% Similarity=0.083 Sum_probs=30.7
Q ss_pred CCchhhhHhhhhccCCCCCcccc------ccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTF------GERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~------~e~~~~~~~~~~~ 36 (257)
+|+++++.+.++|..||+.|+++ .+++.|+|+....
T Consensus 226 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~ 267 (327)
T cd05617 226 LSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSID 267 (327)
T ss_pred CCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCC
Confidence 46789999999999999999986 4889999987644
No 222
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=66.01 E-value=3.6 Score=32.63 Aligned_cols=59 Identities=25% Similarity=0.437 Sum_probs=42.1
Q ss_pred HHHhhCCC-CCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 159 AFRLYDLR-QTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 159 ~F~~~D~d-~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
-|-.+|+. .||+++-.|+.-+-. +-++ .+.-+..+|..+|.|+||.|+.+||..++.-.
T Consensus 192 qf~qld~~p~d~~~sh~el~pl~a-------p~ip---me~c~~~f~e~cd~~nd~~ial~ew~~c~gik 251 (259)
T KOG4004|consen 192 QFGQLDQHPIDGYLSHTELAPLRA-------PLIP---MEHCTTRFFETCDLDNDKYIALDEWAGCFGIK 251 (259)
T ss_pred eeccccCCCccccccccccccccC-------Cccc---HHhhchhhhhcccCCCCCceeHHHhhcccCcc
Confidence 34455543 679999988876531 2233 23346788999999999999999999887543
No 223
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=65.73 E-value=2.5 Score=36.27 Aligned_cols=35 Identities=9% Similarity=0.040 Sum_probs=30.1
Q ss_pred CCchhhhHhhhhccCCCCCcccc------ccchhhccccch
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTF------GERICAACIPLI 35 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~------~e~~~~~~~~~~ 35 (257)
++.++++.+.++|..||..|+|+ .+++.|||+...
T Consensus 228 ~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 228 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred CCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 35678899999999999999995 689999999654
No 224
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=65.32 E-value=3.3 Score=36.40 Aligned_cols=36 Identities=3% Similarity=-0.077 Sum_probs=29.4
Q ss_pred CCchhhhHhhhhc--cCCCCCccccccchhhccccchh
Q 025118 1 MDSSANRSFLRAF--DYDGSSSLTFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~l--d~~~~~rls~~e~~~~~~~~~~~ 36 (257)
+|++|++++.+++ +.++.+|+|+.+++.|||+....
T Consensus 275 ~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~ 312 (381)
T cd05626 275 LSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVD 312 (381)
T ss_pred CCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCCC
Confidence 4688999999855 56777799999999999996543
No 225
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=64.84 E-value=5 Score=34.09 Aligned_cols=33 Identities=6% Similarity=-0.165 Sum_probs=29.1
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
+++.+..+-+++..+|..|+|+.+++.|+|+..
T Consensus 246 ~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~ 278 (313)
T cd06633 246 TDSFRGFVDYCLQKIPQERPASAELLRHDFVRR 278 (313)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 346788899999999999999999999999954
No 226
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=64.63 E-value=3.3 Score=35.34 Aligned_cols=36 Identities=17% Similarity=0.063 Sum_probs=31.0
Q ss_pred CCchhhhHhhhhccCCCCCccccc----cchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFG----ERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~----e~~~~~~~~~~~ 36 (257)
+++++++.+.++|..|+..|++++ +++.|||+....
T Consensus 219 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~ 258 (323)
T cd05575 219 ISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSIN 258 (323)
T ss_pred CCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCC
Confidence 367889999999999999999985 889999997644
No 227
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=64.35 E-value=2.9 Score=35.77 Aligned_cols=36 Identities=14% Similarity=0.116 Sum_probs=31.5
Q ss_pred CCchhhhHhhhhccCCCCCcc-----ccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSL-----TFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rl-----s~~e~~~~~~~~~~~ 36 (257)
+++++++.+.+++..++..|+ ++.+++.|||+....
T Consensus 223 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~ 263 (323)
T cd05584 223 LTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVN 263 (323)
T ss_pred CCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCC
Confidence 367889999999999999999 899999999997544
No 228
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=64.08 E-value=3.2 Score=35.35 Aligned_cols=33 Identities=6% Similarity=-0.187 Sum_probs=28.9
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
++.+++.+-+++..++..|+|+.+++.|+|+..
T Consensus 250 ~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 250 SDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred cHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 456788999999999999999999999988743
No 229
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=62.93 E-value=7.2 Score=28.15 Aligned_cols=32 Identities=16% Similarity=0.360 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q 025118 191 LPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVR 226 (257)
Q Consensus 191 ~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~ 226 (257)
+++++++.+. .++-.|..|.|.|.||+.-+..
T Consensus 4 LtDeQFdrLW----~e~Pvn~~GrLkY~eFL~kfs~ 35 (118)
T PF08976_consen 4 LTDEQFDRLW----NEMPVNAKGRLKYQEFLSKFSS 35 (118)
T ss_dssp --HHHHHHHH----TTS-B-TTS-EEHHHHHHHT--
T ss_pred ccHHHhhhhh----hhCcCCccCCEeHHHHHHHccc
Confidence 6777765555 7888999999999999988763
No 230
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=62.51 E-value=14 Score=18.00 Aligned_cols=16 Identities=13% Similarity=0.341 Sum_probs=11.2
Q ss_pred CCCCCCcccHHHHHHH
Q 025118 164 DLRQTGYIEREEVKQM 179 (257)
Q Consensus 164 D~d~~G~I~~~e~~~~ 179 (257)
|.|+||.|+.-++.-+
T Consensus 1 DvN~DG~vna~D~~~l 16 (21)
T PF00404_consen 1 DVNGDGKVNAIDLALL 16 (21)
T ss_dssp -TTSSSSSSHHHHHHH
T ss_pred CCCCCCcCCHHHHHHH
Confidence 5678888887777654
No 231
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=62.40 E-value=3.5 Score=32.68 Aligned_cols=56 Identities=21% Similarity=0.314 Sum_probs=35.8
Q ss_pred HHHHcCC-CCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q 025118 123 FDLFDEK-KNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 123 f~~~d~~-~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~ 181 (257)
|-.+|.. .||+++-.|+.-+-+.+. +.+.-+...|...|.|+||+|+.+|+...+.
T Consensus 193 f~qld~~p~d~~~sh~el~pl~ap~i---pme~c~~~f~e~cd~~nd~~ial~ew~~c~g 249 (259)
T KOG4004|consen 193 FGQLDQHPIDGYLSHTELAPLRAPLI---PMEHCTTRFFETCDLDNDKYIALDEWAGCFG 249 (259)
T ss_pred eccccCCCccccccccccccccCCcc---cHHhhchhhhhcccCCCCCceeHHHhhcccC
Confidence 4445543 367777777765544332 3444566777888888888888887776654
No 232
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=61.97 E-value=3.2 Score=34.72 Aligned_cols=35 Identities=11% Similarity=0.026 Sum_probs=30.7
Q ss_pred CchhhhHhhhhccCCCCCcc-----ccccchhhccccchh
Q 025118 2 DSSANRSFLRAFDYDGSSSL-----TFGERICAACIPLIA 36 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rl-----s~~e~~~~~~~~~~~ 36 (257)
+++.++.+.+++..|+..|+ +++|++.|||+....
T Consensus 222 ~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 222 SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred CHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence 56778899999999999999 899999999986544
No 233
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=60.60 E-value=22 Score=26.01 Aligned_cols=47 Identities=21% Similarity=0.299 Sum_probs=38.2
Q ss_pred CCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHH
Q 025118 167 QTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKE 218 (257)
Q Consensus 167 ~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~ 218 (257)
..|.||.+|-.++| +....++.++++.-...+|+.-|+.+.|..-.+
T Consensus 52 ~~~~iTlqEa~qIL-----nV~~~ln~eei~k~yehLFevNdkskGGSFYLQ 98 (132)
T KOG3442|consen 52 SNGKITLQEAQQIL-----NVKEPLNREEIEKRYEHLFEVNDKSKGGSFYLQ 98 (132)
T ss_pred ccccccHHHHhhHh-----CCCCCCCHHHHHHHHHHHHhccCcccCcceeeh
Confidence 34779999999997 355678889999999999999999888865443
No 234
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=59.76 E-value=3.9 Score=35.52 Aligned_cols=35 Identities=11% Similarity=0.061 Sum_probs=29.9
Q ss_pred CCchhhhHhhhhccCCCCCccc---cccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLT---FGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls---~~e~~~~~~~~~~~ 36 (257)
+|+++++++.+++. ++..|++ +.+++.|||+....
T Consensus 266 ~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~ 303 (364)
T cd05599 266 LSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVD 303 (364)
T ss_pred CCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCC
Confidence 36789999999985 8999998 99999999997644
No 235
>PLN02222 phosphoinositide phospholipase C 2
Probab=58.93 E-value=46 Score=31.34 Aligned_cols=68 Identities=10% Similarity=0.245 Sum_probs=47.0
Q ss_pred hHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcC-CCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q 025118 152 IEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEI-KLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRN 227 (257)
Q Consensus 152 ~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~-~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~ 227 (257)
...++..+|..|-. ++.++.++|..+|.. .-|. ..+.+.++.++... . ...+.+.++++.|..+|...
T Consensus 23 ~~~ei~~if~~~~~--~~~mt~~~l~~FL~~---~Q~~~~~~~~~~~~ii~~~-~--~~~~~~~~~~~gF~~yL~s~ 91 (581)
T PLN02222 23 APREIKTIFEKYSE--NGVMTVDHLHRFLID---VQKQDKATREDAQSIINSA-S--SLLHRNGLHLDAFFKYLFGD 91 (581)
T ss_pred CcHHHHHHHHHhcC--CCCcCHHHHHHHHHH---hcCCccCCHHHHHHHHHhh-h--hhhhccCcCHHHHHHHhcCC
Confidence 44688999999853 479999999999853 3343 34566666666532 1 11235679999999999874
No 236
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=58.86 E-value=5.2 Score=35.10 Aligned_cols=35 Identities=11% Similarity=0.081 Sum_probs=29.7
Q ss_pred CCchhhhHhhhhccCCCCCccc---cccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLT---FGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls---~~e~~~~~~~~~~~ 36 (257)
++++|++++.+++ .++..|++ +.|++.|||+....
T Consensus 275 ~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~ 312 (382)
T cd05625 275 LSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTID 312 (382)
T ss_pred CCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcC
Confidence 4788999998876 68999997 99999999997654
No 237
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=57.81 E-value=4.3 Score=34.68 Aligned_cols=35 Identities=11% Similarity=-0.025 Sum_probs=29.8
Q ss_pred CchhhhHhhhhccCCCCCcc-----ccccchhhccccchh
Q 025118 2 DSSANRSFLRAFDYDGSSSL-----TFGERICAACIPLIA 36 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rl-----s~~e~~~~~~~~~~~ 36 (257)
++++.+.+.++|..|++.|+ ++.+++.|+|+....
T Consensus 225 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~ 264 (324)
T cd05589 225 SREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDIN 264 (324)
T ss_pred CHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCC
Confidence 56788999999999999999 577889999986544
No 238
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=57.46 E-value=4.6 Score=34.47 Aligned_cols=36 Identities=14% Similarity=-0.022 Sum_probs=30.1
Q ss_pred CCchhhhHhhhhccCCCCCcccc-----ccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTF-----GERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~-----~e~~~~~~~~~~~ 36 (257)
+++++++.+.++|..+++.|++. .+++.|+|+....
T Consensus 224 ~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~ 264 (323)
T cd05616 224 MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 264 (323)
T ss_pred CCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCC
Confidence 46789999999999999999985 6788898886543
No 239
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=57.45 E-value=5.1 Score=34.36 Aligned_cols=36 Identities=8% Similarity=-0.071 Sum_probs=29.1
Q ss_pred CCchhhhHhhhhc--cCCCCCccccccchhhccccchh
Q 025118 1 MDSSANRSFLRAF--DYDGSSSLTFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~l--d~~~~~rls~~e~~~~~~~~~~~ 36 (257)
++.++++.+.+++ +.+..+|.++.|++.|||+....
T Consensus 236 ~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~ 273 (332)
T cd05623 236 VSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGID 273 (332)
T ss_pred CCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCC
Confidence 4678899999988 45666688999999999997654
No 240
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=57.43 E-value=6 Score=35.40 Aligned_cols=34 Identities=9% Similarity=-0.070 Sum_probs=29.7
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccch
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPLI 35 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~ 35 (257)
|+..|+.+--+||+||.-|+||.++++|.++...
T Consensus 236 S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a 269 (467)
T KOG0201|consen 236 SPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRA 269 (467)
T ss_pred CHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhc
Confidence 4557889999999999999999999999988653
No 241
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=57.28 E-value=5.1 Score=34.15 Aligned_cols=35 Identities=14% Similarity=0.138 Sum_probs=29.8
Q ss_pred CchhhhHhhhhccCCCCCccccc-cchhhccccchh
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFG-ERICAACIPLIA 36 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~-e~~~~~~~~~~~ 36 (257)
+.++++.+.++|+.|++.|++.. +++.|+|+....
T Consensus 220 ~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05592 220 SKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGID 255 (316)
T ss_pred CHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCC
Confidence 56788999999999999999875 778999987644
No 242
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=54.95 E-value=4.7 Score=38.58 Aligned_cols=34 Identities=9% Similarity=-0.018 Sum_probs=30.1
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccch
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPLI 35 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~ 35 (257)
+.++++.+-++|..++..|+|+.|+++|+|+...
T Consensus 607 ~~~~~~~l~~lL~~dP~~R~ta~e~l~h~~~~~~ 640 (669)
T cd05610 607 SVNAQNAIEILLTMDPTKRAGLKELKQHPLFHGV 640 (669)
T ss_pred CHHHHHHHHHHcccChhHCcCHHHHHhCHhhcCC
Confidence 4567888999999999999999999999998654
No 243
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=54.36 E-value=5.7 Score=34.69 Aligned_cols=35 Identities=17% Similarity=0.109 Sum_probs=29.8
Q ss_pred CCchhhhHhhhhccCCCCCcc---ccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSL---TFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rl---s~~e~~~~~~~~~~~ 36 (257)
+++++++.+.+++ .++..|+ |+.|++.|||+....
T Consensus 271 ~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~~ 308 (376)
T cd05598 271 LSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGID 308 (376)
T ss_pred CCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCCC
Confidence 3678888998866 6999999 999999999997655
No 244
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=54.27 E-value=6.2 Score=33.70 Aligned_cols=35 Identities=11% Similarity=-0.016 Sum_probs=30.1
Q ss_pred CchhhhHhhhhccCCCCCccccc----cchhhccccchh
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFG----ERICAACIPLIA 36 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~----e~~~~~~~~~~~ 36 (257)
++++.+.+.++|..++..|++++ +++.|||+....
T Consensus 220 ~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~ 258 (325)
T cd05604 220 SLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLS 258 (325)
T ss_pred CHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCC
Confidence 56788999999999999999986 789999997543
No 245
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=54.13 E-value=4.4 Score=36.54 Aligned_cols=34 Identities=15% Similarity=0.263 Sum_probs=31.7
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
|||+||..+.|+|..-...|+.+.++.|+|.+-.
T Consensus 713 VsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 713 VSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred cCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 7999999999999999999999999999998754
No 246
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=53.99 E-value=20 Score=25.13 Aligned_cols=58 Identities=19% Similarity=0.363 Sum_probs=36.0
Q ss_pred CcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHH---HHHHHcCCCCCCcccHHHHHHHHHhChHHHHhcC
Q 025118 169 GYIEREEVKQMVAAILMESEIKLPDDLLEAIID---KTFADADIDKDGRINKEEWKEFAVRNPSLLKNMT 235 (257)
Q Consensus 169 G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~---~~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~~ 235 (257)
...+.+++..++. ..|. . ++.+++ ..|+..+......++-+|++++|.++|.+++.-.
T Consensus 34 ~~~~~~~l~~~~~----~~~~--~---~~~li~~~~~~~~~l~~~~~~~ls~~e~~~~l~~~p~LikRPi 94 (105)
T cd02977 34 EPPTKEELKELLA----KLGL--G---VEDLFNTRGTPYRKLGLADKDELSDEEALELMAEHPKLIKRPI 94 (105)
T ss_pred CCCCHHHHHHHHH----hcCC--C---HHHHHhcCCchHHHcCCccccCCCHHHHHHHHHhCcCeeeCCE
Confidence 4467777777763 2221 1 222232 3445555543457899999999999999877543
No 247
>PF03705 CheR_N: CheR methyltransferase, all-alpha domain; InterPro: IPR022641 CheR proteins are part of the chemotaxis signaling mechanism which methylates the chemotaxis receptor at specific glutamate residues. This entry refers to the N-terminal domain of the CherR-type MCP methyltransferases, which are found in bacteria, archaea and green plants. This entry is found in association with PF01739 from PFAM. Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Flagellated bacteria swim towards favourable chemicals and away from deleterious ones. Sensing of chemoeffector gradients involves chemotaxis receptors, transmembrane (TM) proteins that detect stimuli through their periplasmic domains and transduce the signals via their cytoplasmic domains []. Signalling outputs from these receptors are influenced both by the binding of the chemoeffector ligand to their periplasmic domains and by methylation of specific glutamate residues on their cytoplasmic domains. Methylation is catalysed by CheR, an S-adenosylmethionine-dependent methyltransferase [], which reversibly methylates specific glutamate residues within a coiled coil region, to form gamma-glutamyl methyl ester residues [, ]. The structure of the Salmonella typhimurium chemotaxis receptor methyltransferase CheR, bound to S-adenosylhomocysteine, has been determined to a resolution of 2.0 A []. The structure reveals CheR to be a two-domain protein, with a smaller N-terminal helical domain linked via a single polypeptide connection to a larger C-terminal alpha/beta domain. The C-terminal domain has the characteristics of a nucleotide-binding fold, with an insertion of a small anti-parallel beta-sheet subdomain. The S-adenosylhomocysteine-binding site is formed mainly by the large domain, with contributions from residues within the N-terminal domain and the linker region [].; PDB: 1AF7_A 1BC5_A.
Probab=53.25 E-value=26 Score=21.30 Aligned_cols=52 Identities=21% Similarity=0.287 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCHH---HHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChH
Q 025118 173 REEVKQMVAAILMESEIKLPDD---LLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPS 229 (257)
Q Consensus 173 ~~e~~~~l~~~~~~~g~~~s~~---~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~ 229 (257)
..+|..+...+....|..+++. .++.-+...... -|.=+|.+|...+..+|.
T Consensus 2 d~~f~~~~~~i~~~~Gi~l~~~K~~~l~rRl~~rm~~-----~~~~~~~~y~~~L~~d~~ 56 (57)
T PF03705_consen 2 DAEFERFRELIYRRTGIDLSEYKRSLLERRLARRMRA-----LGLPSFAEYYELLRSDPD 56 (57)
T ss_dssp HHHHHHHHHHHHHHH-----GGGHHHHHHHHHHHHHH-----HT---HHHHHHHHHH-T-
T ss_pred HHHHHHHHHHHHHHHCCCCchhhHHHHHHHHHHHHHH-----cCCCCHHHHHHHHHhCCC
Confidence 3556666666667788877754 344444433333 345689999999988764
No 248
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=53.01 E-value=7.5 Score=33.33 Aligned_cols=35 Identities=9% Similarity=-0.114 Sum_probs=27.5
Q ss_pred CCchhhhHhhhhcc--CCCCCccccccchhhccccch
Q 025118 1 MDSSANRSFLRAFD--YDGSSSLTFGERICAACIPLI 35 (257)
Q Consensus 1 ~~~~a~~~~f~~ld--~~~~~rls~~e~~~~~~~~~~ 35 (257)
++.++++.+.++|. .++.+|+++.+++.|||+...
T Consensus 236 ~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 236 VSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred CCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 35678888888774 455568999999999999654
No 249
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=52.87 E-value=6.7 Score=34.38 Aligned_cols=35 Identities=6% Similarity=-0.175 Sum_probs=28.3
Q ss_pred CCchhhhHhhhhccCCC--CCccccccchhhccccch
Q 025118 1 MDSSANRSFLRAFDYDG--SSSLTFGERICAACIPLI 35 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~--~~rls~~e~~~~~~~~~~ 35 (257)
++.++++.+.++|..++ .+|+|+.|++.|||+...
T Consensus 274 ~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 274 ISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred CCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 46789999999996444 458999999999999653
No 250
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=52.74 E-value=9.4 Score=37.62 Aligned_cols=71 Identities=20% Similarity=0.349 Sum_probs=57.7
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 025118 73 RFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVF 146 (257)
Q Consensus 73 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 146 (257)
..+..+...+.++|...|++ .+|.|+-.+....+...++. ...+..++...|..+.|.+++.+|...+...
T Consensus 276 ~vsp~d~~~~~~if~q~d~~--~dG~I~s~~~~~~f~~~gl~-~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~~ 346 (847)
T KOG0998|consen 276 KVSPSDKQKYSKIFSQVDKD--NDGSISSNEARNIFLPFGLS-KPRLAHVWLLADTQNTGTLSKDEFALAMHLL 346 (847)
T ss_pred ccChHHHHHHHHHHHhcccc--CCCcccccccccccccCCCC-hhhhhhhhhhcchhccCcccccccchhhhhh
Confidence 56778888899999999998 99999999998877653333 3457779999999999999999988776555
No 251
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=52.09 E-value=6.9 Score=34.00 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=28.1
Q ss_pred CCchhhhHhhhhccCCCCCccc---cccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLT---FGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls---~~e~~~~~~~~~~~ 36 (257)
+|++|++++.+++ .|+..|++ +.|++.|||+....
T Consensus 263 ~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~ 300 (360)
T cd05627 263 ISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGVD 300 (360)
T ss_pred CCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCCC
Confidence 3678999999876 58888884 78999999997643
No 252
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=51.38 E-value=7.7 Score=33.12 Aligned_cols=35 Identities=17% Similarity=0.071 Sum_probs=29.9
Q ss_pred CCchhhhHhhhhccCCCCCccccc----cchhhccccch
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFG----ERICAACIPLI 35 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~----e~~~~~~~~~~ 35 (257)
+++++++.+.++|.+|+..|+++. ++..|+|+...
T Consensus 219 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 219 ITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred CCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 467899999999999999999987 67788888554
No 253
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=51.04 E-value=34 Score=20.02 Aligned_cols=34 Identities=15% Similarity=0.259 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhc
Q 025118 77 NELEALSELYKNLSCSIIKDGLIHKEELQVALFQ 110 (257)
Q Consensus 77 ~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~ 110 (257)
..+..+..+|.++...-....+++..||+..+..
T Consensus 3 ~ai~~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~ 36 (44)
T PF01023_consen 3 KAIETIIDVFHKYAGKEGDKDTLSKKELKELLEK 36 (44)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCeEcHHHHHHHHHH
Confidence 3456667777777632113558999999887754
No 254
>KOG2871 consensus Uncharacterized conserved protein [Function unknown]
Probab=51.01 E-value=13 Score=32.62 Aligned_cols=31 Identities=13% Similarity=0.328 Sum_probs=27.8
Q ss_pred ChHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q 025118 151 PIEDKIDFAFRLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 151 ~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~ 181 (257)
.+.+.++++|+.+|..+.|+|+.+-+..+++
T Consensus 306 ~~s~q~rR~f~a~d~~d~nfis~s~~~~vm~ 336 (449)
T KOG2871|consen 306 NPSEQLRRNFHAYDPEDNNFISCSGLQIVMT 336 (449)
T ss_pred CCCHHHHhhhhccCccCCCeeecHHHHHHHH
Confidence 4467899999999999999999999999884
No 255
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=50.84 E-value=20 Score=25.32 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=25.0
Q ss_pred HHHHcCCCCCCcccHHHHHHHHHhChHHHHhcCCC
Q 025118 203 TFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLP 237 (257)
Q Consensus 203 ~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~~~~ 237 (257)
.|+....+....++-++++++|.++|.+++.-.+.
T Consensus 60 ~yk~l~l~~~~~~s~~e~~~~l~~~p~LikRPIi~ 94 (105)
T cd03035 60 TWRKLDDAQKAALDAAKAIALMLEHPSLIKRPVLE 94 (105)
T ss_pred HHHhCChhhhccCCHHHHHHHHHhCcCeeecceEE
Confidence 44555544224588999999999999998865443
No 256
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=50.72 E-value=33 Score=22.40 Aligned_cols=49 Identities=22% Similarity=0.259 Sum_probs=36.1
Q ss_pred CCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHH
Q 025118 131 NGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183 (257)
Q Consensus 131 ~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~ 183 (257)
+-.++|..++.++.... +...+..+...|+.=..+.|+++||.+.++.+
T Consensus 6 sp~~~F~~L~~~l~~~l----~~~~~~~l~~~Y~~~k~~kIsR~~fvr~lR~I 54 (70)
T PF12174_consen 6 SPWMPFPMLFSALSKHL----PPSKMDLLQKHYEEFKKKKISREEFVRKLRQI 54 (70)
T ss_pred CCcccHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 44678888888777553 33556666677766678999999999998754
No 257
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=50.48 E-value=8.9 Score=35.38 Aligned_cols=34 Identities=15% Similarity=0.021 Sum_probs=30.4
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccch
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPLI 35 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~ 35 (257)
++.|++++-+.|.+|++.|+|+.++..||++...
T Consensus 311 p~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V 344 (604)
T KOG0592|consen 311 PEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGV 344 (604)
T ss_pred CHHHHHHHHHHHccCccccccHHHHhhCcccccC
Confidence 4679999999999999999999999999988543
No 258
>PF04876 Tenui_NCP: Tenuivirus major non-capsid protein; InterPro: IPR006960 This entry contains the tenuivirus major non-capsid protein. Proteins accumulate in large amounts in tenuivirus infected cells. They are found in the inclusion bodies that are formed after infection [].
Probab=49.71 E-value=71 Score=24.22 Aligned_cols=41 Identities=12% Similarity=0.351 Sum_probs=22.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChHHHHhc
Q 025118 191 LPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNM 234 (257)
Q Consensus 191 ~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~ 234 (257)
+|.+++..++..+...+..++ ++=+++...+.+.|.+...+
T Consensus 128 MSk~Qik~L~~~Ii~~akae~---~dtE~Ye~vwkKmPaY~~ni 168 (175)
T PF04876_consen 128 MSKDQIKTLCEQIIEMAKAES---SDTEHYEKVWKKMPAYFSNI 168 (175)
T ss_pred hhHHHHHHHHHHHHHHHhccC---CchHHHHHHHHHhhHHHHHH
Confidence 344444444443333333322 45578888888888766544
No 259
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=49.58 E-value=7 Score=34.21 Aligned_cols=34 Identities=9% Similarity=-0.019 Sum_probs=27.1
Q ss_pred CCchhhhHhhhhccCCCCC---ccccccchhhccccch
Q 025118 1 MDSSANRSFLRAFDYDGSS---SLTFGERICAACIPLI 35 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~---rls~~e~~~~~~~~~~ 35 (257)
+|.++++++.++|. ++.. |.|+.|++.|||+...
T Consensus 275 ~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 275 LSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred CCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 36789999999986 5555 4599999999999653
No 260
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=49.20 E-value=7.1 Score=35.90 Aligned_cols=34 Identities=6% Similarity=0.005 Sum_probs=30.2
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
++++.++.+.+++..||..|+|+.+++.|||...
T Consensus 269 ~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 269 ISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 3567899999999999999999999999998754
No 261
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=49.15 E-value=33 Score=24.37 Aligned_cols=21 Identities=33% Similarity=0.784 Sum_probs=14.7
Q ss_pred HhhCCCCCCcccHHHHHHHHH
Q 025118 161 RLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 161 ~~~D~d~~G~I~~~e~~~~l~ 181 (257)
++||...+-+||.+++.+++.
T Consensus 10 RLYDT~tS~YITLedi~~lV~ 30 (107)
T TIGR01848 10 RLYDTETSSYVTLEDIRDLVR 30 (107)
T ss_pred cccCCCccceeeHHHHHHHHH
Confidence 356777777777777777764
No 262
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=48.67 E-value=7.6 Score=33.16 Aligned_cols=36 Identities=14% Similarity=-0.039 Sum_probs=29.6
Q ss_pred CCchhhhHhhhhccCCCCCcccc-----ccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTF-----GERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~-----~e~~~~~~~~~~~ 36 (257)
+++++++.+.++|..+|..|++. .+++.|+|+....
T Consensus 224 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~ 264 (323)
T cd05615 224 LSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRID 264 (323)
T ss_pred CCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCC
Confidence 36788999999999999999985 4678888886543
No 263
>PLN02228 Phosphoinositide phospholipase C
Probab=48.34 E-value=1e+02 Score=29.05 Aligned_cols=64 Identities=17% Similarity=0.297 Sum_probs=37.5
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCC---CChHHHHHHHHHHcCC----CCCcccHHHHHHHH
Q 025118 73 RFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPY---GENLFLDRVFDLFDEK----KNGVIDFEEFVHAL 143 (257)
Q Consensus 73 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~---~~~~~~~~lf~~~d~~----~~g~I~f~ef~~~~ 143 (257)
...+.+|..++..+. +++.++.++|..+|..... .....+..++..+... ..|.++.+.|..++
T Consensus 20 ~~~~~ei~~if~~~s-------~~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl 90 (567)
T PLN02228 20 REPPVSIKRLFEAYS-------RNGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYL 90 (567)
T ss_pred CCCcHHHHHHHHHhc-------CCCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHh
Confidence 346667766665543 2356888888777765321 1233566777776543 23567777777655
No 264
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=47.46 E-value=8.1 Score=33.68 Aligned_cols=34 Identities=15% Similarity=0.143 Sum_probs=31.1
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
++++|-+++-+.|-.+|+.|+|+.|+++||.+..
T Consensus 278 ~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFde 311 (364)
T KOG0658|consen 278 LPPDALDLLSKLLQYSPSKRLSALEALAHPFFDE 311 (364)
T ss_pred CCHHHHHHHHHHhccChhhcCCHHHHhcchhhHH
Confidence 4789999999999999999999999999998754
No 265
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=46.87 E-value=10 Score=32.97 Aligned_cols=36 Identities=11% Similarity=-0.030 Sum_probs=27.8
Q ss_pred CCchhhhHhhhhcc--CCCCCccccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFD--YDGSSSLTFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld--~~~~~rls~~e~~~~~~~~~~~ 36 (257)
+|++|++++.+++. .++.+|.++.|++.|||+....
T Consensus 263 ~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~~~~ 300 (363)
T cd05628 263 ISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEGVD 300 (363)
T ss_pred CCHHHHHHHHHHcCChhhcCCCCCHHHHhCCCCCCCCC
Confidence 46789999998664 2334678999999999997654
No 266
>cd08327 CARD_RAIDD Caspase activation and recruitment domain of RIP-associated ICH-1 homologous protein with a death domain. Caspase activation and recruitment domain (CARD) of RAIDD (RIP-associated ICH-1 homologous protein with a death domain), also known as CRADD (Caspase and RIP adaptor). RAIDD is an adaptor protein that together with the p53-inducible protein PIDD and caspase-2, forms the PIDDosome complex, which is required for caspase-2 activation and plays a role in mediating stress-induced apoptosis. RAIDD contains an N-terminal CARD, which interacts with the caspase-2 CARD, and a C-terminal Death domain (DD), which interacts with the DD of PIDD. In general, CARDs are DDs associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodime
Probab=46.37 E-value=44 Score=23.21 Aligned_cols=55 Identities=9% Similarity=0.109 Sum_probs=37.3
Q ss_pred CCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChHHHHhc
Q 025118 167 QTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNM 234 (257)
Q Consensus 167 ~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~ 234 (257)
++|.||.++...+- ....+.+....++ .. .-..|.-.|..|++++..+|.+.+.+
T Consensus 32 ~~gIlT~~~~e~I~-------a~~T~~~k~~~LL----di--Lp~RG~~AF~~F~~aL~e~~~l~~~l 86 (94)
T cd08327 32 QEGILTESHVEEIE-------SQTTSRRKTMKLL----DI--LPSRGPKAFHAFLDSLEEFPWVRDKL 86 (94)
T ss_pred hCCCCCHHHHHHHH-------ccCChHHHHHHHH----HH--HHhhChhHHHHHHHHHHHHHHHHHHH
Confidence 46888888887764 1233344444444 22 23457789999999999998887755
No 267
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=46.18 E-value=7.8 Score=35.36 Aligned_cols=33 Identities=6% Similarity=-0.036 Sum_probs=29.0
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
+.+.++.+-++|..||..|+|+.+++.++|+..
T Consensus 296 s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 296 SSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 567889999999999999999999998887753
No 268
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=44.33 E-value=9.8 Score=32.01 Aligned_cols=37 Identities=11% Similarity=-0.132 Sum_probs=30.0
Q ss_pred CchhhhHhhhhccCCCCCccc---cccchhhccccchhHH
Q 025118 2 DSSANRSFLRAFDYDGSSSLT---FGERICAACIPLIAII 38 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls---~~e~~~~~~~~~~~~~ 38 (257)
+.+.++.+.+++..+|..|+| +.+.+.|||+......
T Consensus 243 ~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~ 282 (305)
T cd05609 243 PADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWN 282 (305)
T ss_pred CHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHH
Confidence 456789999999999999998 5777899988665533
No 269
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=42.82 E-value=48 Score=23.61 Aligned_cols=60 Identities=12% Similarity=0.228 Sum_probs=37.1
Q ss_pred CcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHH---HHHHHcCCCCCCcccHHHHHHHHHhChHHHHhcCCCC
Q 025118 169 GYIEREEVKQMVAAILMESEIKLPDDLLEAIID---KTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLPY 238 (257)
Q Consensus 169 G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~---~~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~~~~~ 238 (257)
..++.+|+..++. ..|.. ++++++ ..|+....+. ..++-++++++|.++|.+++.-.+..
T Consensus 34 ~~~t~~el~~~l~----~~~~~-----~~~lin~~~~~y~~l~~~~-~~ls~~e~i~ll~~~P~LikRPIi~~ 96 (112)
T cd03034 34 TPPTAAELRELLA----KLGIS-----PRDLLRTKEAPYKELGLAD-PELSDEELIDAMAAHPILIERPIVVT 96 (112)
T ss_pred CCcCHHHHHHHHH----HcCCC-----HHHHHhcCCchHHHcCCCc-cCCCHHHHHHHHHhCcCcccCCEEEE
Confidence 3467777777763 22311 222232 2345555443 46899999999999999998665443
No 270
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=42.80 E-value=45 Score=23.89 Aligned_cols=63 Identities=11% Similarity=0.255 Sum_probs=35.9
Q ss_pred cccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChHHHHhcCCCC
Q 025118 170 YIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLPY 238 (257)
Q Consensus 170 ~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~~~~~ 238 (257)
.++.+|+..++. ..|.....+-+. --...|+....+. ..++-++++++|.++|.+++.-.+..
T Consensus 35 p~t~~el~~~l~----~~g~~~~~~lin-~~~~~~~~l~~~~-~~ls~~e~i~~l~~~P~LikRPIi~~ 97 (114)
T TIGR00014 35 PPTKSELEAIFA----KLGLTVAREMIR-TKEALYKELGLSD-PNLSDQELLDAMVAHPILLERPIVVA 97 (114)
T ss_pred CcCHHHHHHHHH----HcCCchHHHHHh-cCCcHHHHcCCCc-cCCCHHHHHHHHHHCcCcccCCeEEE
Confidence 467777777763 333211011110 0112445554433 36888999999999999998654443
No 271
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=41.87 E-value=14 Score=31.36 Aligned_cols=35 Identities=14% Similarity=0.016 Sum_probs=29.4
Q ss_pred CchhhhHhhhhccCCCCCccccc----cchhhccccchh
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFG----ERICAACIPLIA 36 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~----e~~~~~~~~~~~ 36 (257)
+.++++.+.++|..++..|+++. |++.|+|+....
T Consensus 220 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~ 258 (321)
T cd05603 220 TVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPIN 258 (321)
T ss_pred CHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCC
Confidence 45688999999999999999875 788999986544
No 272
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=41.82 E-value=12 Score=33.85 Aligned_cols=33 Identities=15% Similarity=-0.046 Sum_probs=27.6
Q ss_pred chhhhHhhhhccCCCCCccccccchhhccccch
Q 025118 3 SSANRSFLRAFDYDGSSSLTFGERICAACIPLI 35 (257)
Q Consensus 3 ~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~ 35 (257)
.+=+..+-.+|.+||+.|+|+++.+.|+|+...
T Consensus 267 ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~ 299 (516)
T KOG0582|consen 267 KSFREMIALCLVKDPSKRPTASKLLKHAFFKKA 299 (516)
T ss_pred HHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence 344567778999999999999999999999543
No 273
>PF09682 Holin_LLH: Phage holin protein (Holin_LLH); InterPro: IPR010026 This entry represents the Bacteriophage LL-H, Orf107, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=40.45 E-value=1.3e+02 Score=21.29 Aligned_cols=52 Identities=19% Similarity=0.246 Sum_probs=39.2
Q ss_pred HHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcC
Q 025118 157 DFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADAD 208 (257)
Q Consensus 157 ~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d 208 (257)
..+-+.+...++|.--+++-...+...+...|..+|+++++..++.....+.
T Consensus 54 ~aveq~~~~~~~G~~K~~~A~~~v~~~L~~~gi~~t~~~i~~~IEaAV~~m~ 105 (108)
T PF09682_consen 54 NAVEQVAKEGGKGEEKKAEAVQYVKERLKKKGIKVTDEQIEGAIEAAVKEMN 105 (108)
T ss_pred HHHHHHHhccCCcHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHh
Confidence 3444555555688888888888887777888999999999998877665543
No 274
>PRK10026 arsenate reductase; Provisional
Probab=40.06 E-value=50 Score=24.87 Aligned_cols=62 Identities=15% Similarity=0.289 Sum_probs=36.6
Q ss_pred cccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChHHHHhcCCCC
Q 025118 170 YIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLPY 238 (257)
Q Consensus 170 ~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~~~~~ 238 (257)
.++.+|+..++. ..|. ....+-.--...|+....+.+ .++.++++++|.++|.+++.-.+..
T Consensus 38 ppt~~eL~~~l~----~~g~--~~~~lint~~~~yr~L~~~~~-~ls~~e~l~ll~~~P~LIKRPIi~~ 99 (141)
T PRK10026 38 PPTRDELVKLIA----DMGI--SVRALLRKNVEPYEELGLAED-KFTDDQLIDFMLQHPILINRPIVVT 99 (141)
T ss_pred CcCHHHHHHHHH----hCCC--CHHHHHHcCCchHHHcCCCcc-CCCHHHHHHHHHhCccceeCcEEEc
Confidence 467777777763 2221 111111111234566655443 4799999999999999988665443
No 275
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=40.05 E-value=16 Score=37.09 Aligned_cols=32 Identities=16% Similarity=0.069 Sum_probs=29.0
Q ss_pred chhhhHhhhhccCCCCCccccccchhhccccc
Q 025118 3 SSANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 3 ~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
+++++.+..+++.||+.|+||.|++.+-|+|.
T Consensus 845 ~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 845 PEEASLIRWLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred hHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence 46788899999999999999999999999983
No 276
>PF14069 SpoVIF: Stage VI sporulation protein F
Probab=39.88 E-value=1.2e+02 Score=20.44 Aligned_cols=52 Identities=8% Similarity=0.128 Sum_probs=36.1
Q ss_pred CcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q 025118 169 GYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAV 225 (257)
Q Consensus 169 G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~ 225 (257)
..=+...++++++.+...+|.++|++..++++..+- .++- ..++..+..++.
T Consensus 26 dlqdE~~vR~lIk~vs~~an~~Vs~~~ed~IV~~I~----~~~~-p~d~~~l~Km~~ 77 (79)
T PF14069_consen 26 DLQDEKKVRQLIKQVSQIANKPVSKEQEDQIVQAII----NQKI-PNDMNHLMKMMN 77 (79)
T ss_pred hcccHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH----hCCC-CcCHHHHHHHHc
Confidence 334667788888888788899999998888885332 3333 566666666654
No 277
>PF05099 TerB: Tellurite resistance protein TerB; InterPro: IPR007791 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Direct interaction between DnaK and djlA is needed for the induction of the wcaABCDE operon which is involved in the synthesis of a colanic acid polysaccharide capsule. The colanic acid capsule may help the bacterium survive conditions outside the host [, ]; PDB: 2H5N_D 2JXU_A.
Probab=39.88 E-value=1e+02 Score=22.52 Aligned_cols=12 Identities=33% Similarity=0.634 Sum_probs=5.6
Q ss_pred cCCCCCHHHHHH
Q 025118 95 KDGLIHKEELQV 106 (257)
Q Consensus 95 ~~G~i~~~ef~~ 106 (257)
-||.++.+|...
T Consensus 36 aDG~v~~~E~~~ 47 (140)
T PF05099_consen 36 ADGEVDPEEIEA 47 (140)
T ss_dssp TTSS--CHHHHH
T ss_pred cCCCCCHHHHHH
Confidence 466666666544
No 278
>PF12486 DUF3702: ImpA domain protein ; InterPro: IPR021069 This entry represents a conserved region located towards the C-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=39.00 E-value=78 Score=24.06 Aligned_cols=40 Identities=15% Similarity=0.201 Sum_probs=28.9
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHH
Q 025118 155 KIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDD 194 (257)
Q Consensus 155 ~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~ 194 (257)
.+..-....|..+.+++|.+|++.++-.+....+..++-+
T Consensus 70 ~L~~rL~~le~~rg~Y~TiSeLKT~vy~i~q~l~~~~P~E 109 (148)
T PF12486_consen 70 QLADRLNQLEEQRGKYMTISELKTAVYQIQQSLNQSVPLE 109 (148)
T ss_pred HHHHHHHHHHHhcCCceeHHHHHHHHHHHHHHhcCCCCHH
Confidence 4445556677788888999999999887766666666643
No 279
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=38.45 E-value=11 Score=34.58 Aligned_cols=35 Identities=14% Similarity=0.044 Sum_probs=29.7
Q ss_pred CCchhhhHhhhhccCCCCCccc---cccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLT---FGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls---~~e~~~~~~~~~~~ 36 (257)
.|+||+++|-|+|. |+..|+- +.|+..|||+....
T Consensus 415 ~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 415 LSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD 452 (550)
T ss_pred ccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence 36899999999998 8888885 88999999996543
No 280
>PF11829 DUF3349: Protein of unknown function (DUF3349); InterPro: IPR021784 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 99 to 124 amino acids in length. ; PDB: 2KVC_A 3OL3_B 3OL4_A 2LKY_A.
Probab=38.04 E-value=1.1e+02 Score=21.38 Aligned_cols=65 Identities=9% Similarity=0.126 Sum_probs=44.1
Q ss_pred ccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHH
Q 025118 134 IDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDK 202 (257)
Q Consensus 134 I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~ 202 (257)
|--.+|.-.+..+. ....++++..+-..+-..+...++..++..++. ...+...++++++.+...
T Consensus 20 vP~~Dy~PLlALL~-r~Ltd~ev~~Va~~L~~~~~~~~~~~dI~~~I~---~vt~~~P~~~di~RV~~~ 84 (96)
T PF11829_consen 20 VPPTDYVPLLALLR-RRLTDDEVAEVAAELAARGDPPVDRIDIGVAIT---RVTDELPTPEDIERVRAR 84 (96)
T ss_dssp B-HHHHHHHHHHHT-TTS-HHHHHHHHHHHHHHTSS-BSCCHHHHHHH---HHCSS-S-HHHHHHHHHH
T ss_pred CCCCccHHHHHHhc-ccCCHHHHHHHHHHHHhcCCCCCCHHHHHHHHH---HHHcCCcCHHHHHHHHHH
Confidence 55567777777766 557788888888887667777778888888885 345667788888887643
No 281
>PLN02222 phosphoinositide phospholipase C 2
Probab=37.54 E-value=1.3e+02 Score=28.52 Aligned_cols=63 Identities=14% Similarity=0.240 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCC---CChHHHHHHHHHHcC-CCCCcccHHHHHHHHH
Q 025118 75 SVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPY---GENLFLDRVFDLFDE-KKNGVIDFEEFVHALN 144 (257)
Q Consensus 75 ~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~---~~~~~~~~lf~~~d~-~~~g~I~f~ef~~~~~ 144 (257)
...+|..++..| . +++.++.++|..+|..... .....+..|++.+.. .+.+.++++.|..++.
T Consensus 23 ~~~ei~~if~~~---~----~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~ 89 (581)
T PLN02222 23 APREIKTIFEKY---S----ENGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYLF 89 (581)
T ss_pred CcHHHHHHHHHh---c----CCCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhc
Confidence 445555554443 2 2467888888887765322 223456667776532 2345688888887774
No 282
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=37.09 E-value=93 Score=22.18 Aligned_cols=62 Identities=21% Similarity=0.316 Sum_probs=35.8
Q ss_pred CcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChHHHHhcCCC
Q 025118 169 GYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLP 237 (257)
Q Consensus 169 G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~~~~ 237 (257)
...+.+++.+++.. .|.. -+.+-.--...|+....+. ..++-+|++++|.++|.+++.-.+.
T Consensus 35 ~~~~~~el~~~~~~----~~~~--~~~l~n~~~~~~k~l~~~~-~~ls~~e~i~~l~~~p~LikRPii~ 96 (115)
T cd03032 35 QPLTKEELKEILSL----TENG--VEDIISTRSKAFKNLNIDI-DELSLSELIRLISEHPSLLRRPIII 96 (115)
T ss_pred CcchHHHHHHHHHH----hcCC--HHHHHhcCcHHHHHcCCCc-ccCCHHHHHHHHHhChhheeCCEEE
Confidence 34667777777632 2211 1111000113445555443 4589999999999999998865443
No 283
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=36.51 E-value=28 Score=22.25 Aligned_cols=21 Identities=43% Similarity=0.778 Sum_probs=19.1
Q ss_pred HhhCCCCCCcccHHHHHHHHH
Q 025118 161 RLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 161 ~~~D~d~~G~I~~~e~~~~l~ 181 (257)
++||...+.+|+.+++.+++.
T Consensus 10 RLYDT~~s~YiTL~di~~lV~ 30 (64)
T PF07879_consen 10 RLYDTETSSYITLEDIAQLVR 30 (64)
T ss_pred ccccCCCceeEeHHHHHHHHH
Confidence 478999999999999999985
No 284
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=36.50 E-value=1.2e+02 Score=19.75 Aligned_cols=34 Identities=24% Similarity=0.383 Sum_probs=27.4
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhc
Q 025118 72 SRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQ 110 (257)
Q Consensus 72 ~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~ 110 (257)
..+.......+...|+.+ ..+.|+.+||...++.
T Consensus 20 ~~l~~~~~~~l~~~Y~~~-----k~~kIsR~~fvr~lR~ 53 (70)
T PF12174_consen 20 KHLPPSKMDLLQKHYEEF-----KKKKISREEFVRKLRQ 53 (70)
T ss_pred HHCCHHHHHHHHHHHHHH-----HHCCCCHHHHHHHHHH
Confidence 356777788888888888 7899999999887764
No 285
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=36.49 E-value=33 Score=26.54 Aligned_cols=51 Identities=14% Similarity=0.236 Sum_probs=35.0
Q ss_pred ChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 025118 151 PIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFAD 206 (257)
Q Consensus 151 ~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~ 206 (257)
.+...+..+++.+-.++...++..+|.+.+ -.|..+|++++++.+...+..
T Consensus 82 kt~~Ql~AA~~Yl~~~~~~~~d~~~Fe~~c-----GVGV~VT~E~I~~~V~~~i~~ 132 (164)
T PF04558_consen 82 KTNLQLDAALKYLKSNPSEPIDVAEFEKAC-----GVGVVVTPEQIEAAVEKYIEE 132 (164)
T ss_dssp -SHHHHHHHHHHHHHHGG-G--HHHHHHTT-----TTT----HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCCCCHHHHHHHc-----CCCeEECHHHHHHHHHHHHHH
Confidence 356788899999977777789999999987 478999999999888766643
No 286
>PF00427 PBS_linker_poly: Phycobilisome Linker polypeptide; InterPro: IPR001297 Phycobilisomes (PBSs) are the major light-harvesting systems in cyanobacteria and red algae. PBS is a supercomplex that is composed of a core complex and multiple peripheral rod complexes. Typically, the core consists of two or five cylinders lying on the membrane with, in most cases, multiple rods radiating from the core to form a hemidiscoidal structure. The building units of the core cylinders and the peripheral rods are trimeric and hexameric discs, in which a monomer consists of a pair of related phycobiliproteins (PBPs), such as phycorerythrins, phycoerythrocyanins, phycocyanins, and allophycocyanins. The discs are connected to each other via specific linker polypeptides to form peripheral rods or core cylinders. Linker polypeptides share a conserved domain of ~180 residues, which can be present in one or multiple copies [, , , , ].; GO: 0015979 photosynthesis, 0030089 phycobilisome; PDB: 2L8V_A 2KY4_A 3OSJ_D 2L06_A 3NPH_B 2L3W_A 3PRU_C 3OHW_A.
Probab=36.44 E-value=45 Score=24.78 Aligned_cols=71 Identities=14% Similarity=0.177 Sum_probs=40.1
Q ss_pred ccHHHHHHHHHHHHHh-hcCCCC-HHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChHHHHhc--CCCCcccccccc
Q 025118 171 IEREEVKQMVAAILME-SEIKLP-DDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNM--TLPYLTDITTIF 246 (257)
Q Consensus 171 I~~~e~~~~l~~~~~~-~g~~~s-~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~--~~~~~~~~~~~~ 246 (257)
.+.+++..++.+.+.. .|.... +.+-..-++..| .+|.|+-.||++.+.+..-+.+.+ .++..+-+...|
T Consensus 5 ~s~~~~~~vI~AaYrQVf~~~~~~~~er~~~lESql------rng~IsVreFVr~La~S~~yr~~f~~~~~~~R~iEl~~ 78 (131)
T PF00427_consen 5 SSEEELEAVIRAAYRQVFGNDHPMESERLISLESQL------RNGQISVREFVRALAKSELYRKRFFEPNSNYRFIELAF 78 (131)
T ss_dssp S-HHHHHHHHHHHHHHHHSSSSSHCSHHTHHHHHHH------HTTSS-HHHHHHHHHTSHHHHHHHTTTS-HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCccchhhhccchHHHHH------HcCCCcHHHHHHHHHcCHHHHHHHcccccchHHHHHHH
Confidence 4677788888776644 332211 111111122222 357899999999999998877755 456665555554
Q ss_pred C
Q 025118 247 P 247 (257)
Q Consensus 247 ~ 247 (257)
.
T Consensus 79 k 79 (131)
T PF00427_consen 79 K 79 (131)
T ss_dssp H
T ss_pred H
Confidence 3
No 287
>PLN02230 phosphoinositide phospholipase C 4
Probab=35.34 E-value=1.5e+02 Score=28.09 Aligned_cols=14 Identities=7% Similarity=0.005 Sum_probs=8.5
Q ss_pred cccHHHHHHHHHhC
Q 025118 214 RINKEEWKEFAVRN 227 (257)
Q Consensus 214 ~I~~~eF~~~l~~~ 227 (257)
.|.+.+-+..++++
T Consensus 182 ~i~f~~v~~~I~~~ 195 (598)
T PLN02230 182 EVKLGKCLDSIKAN 195 (598)
T ss_pred CcCHHHHHHHHHHh
Confidence 46666666666554
No 288
>PF14164 YqzH: YqzH-like protein
Probab=34.82 E-value=1.3e+02 Score=19.37 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=27.1
Q ss_pred HHHHHHHHhhCCC-CCCcccHHHHHHHHHHHHHhh
Q 025118 154 DKIDFAFRLYDLR-QTGYIEREEVKQMVAAILMES 187 (257)
Q Consensus 154 ~~~~~~F~~~D~d-~~G~I~~~e~~~~l~~~~~~~ 187 (257)
..++.+|+.|..| ..-.++..|++.+++.+...-
T Consensus 8 Kmi~~~l~QYg~d~~~~pls~~E~~~L~~~i~~~~ 42 (64)
T PF14164_consen 8 KMIINCLRQYGYDVECMPLSDEEWEELCKHIQERK 42 (64)
T ss_pred HHHHHHHHHhCCcccCCCCCHHHHHHHHHHHHHHH
Confidence 4578899999877 668999999999998775443
No 289
>PF03979 Sigma70_r1_1: Sigma-70 factor, region 1.1; InterPro: IPR007127 The bacterial core RNA polymerase complex, which consists of five subunits, is sufficient for transcription elongation and termination but is unable to initiate transcription. Transcription initiation from promoter elements requires a sixth, dissociable subunit called a sigma factor, which reversibly associates with the core RNA polymerase complex to form a holoenzyme []. RNA polymerase recruits alternative sigma factors as a means of switching on specific regulons. Most bacteria express a multiplicity of sigma factors. Two of these factors, sigma-70 (gene rpoD), generally known as the major or primary sigma factor, and sigma-54 (gene rpoN or ntrA) direct the transcription of a wide variety of genes. The other sigma factors, known as alternative sigma factors, are required for the transcription of specific subsets of genes. With regard to sequence similarity, sigma factors can be grouped into two classes, the sigma-54 and sigma-70 families. Sequence alignments of the sigma70 family members reveal four conserved regions that can be further divided into subregions eg. sub-region 2.2, which may be involved in the binding of the sigma factor to the core RNA polymerase; and sub-region 4.2, which seems to harbor a DNA-binding 'helix-turn-helix' motif involved in binding the conserved -35 region of promoters recognised by the major sigma factors [, ]. This entry represents Region 1.1 which modulates DNA binding by region 2 and 4 when sigma is unbound by the core RNA polymerase [, ]. Region 1.1 is also involved in promoter binding.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2K6X_A.
Probab=34.24 E-value=69 Score=21.42 Aligned_cols=39 Identities=21% Similarity=0.364 Sum_probs=20.0
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHH
Q 025118 155 KIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIID 201 (257)
Q Consensus 155 ~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~ 201 (257)
.++.+...-- ..|+||++++..++ ....++.+.++.++.
T Consensus 8 ~i~~Li~~gK--~~G~lT~~eI~~~L------~~~~~~~e~id~i~~ 46 (82)
T PF03979_consen 8 AIKKLIEKGK--KKGYLTYDEINDAL------PEDDLDPEQIDEIYD 46 (82)
T ss_dssp HHHHHHHHHH--HHSS-BHHHHHHH-------S-S---HHHHHHHHH
T ss_pred HHHHHHHHHh--hcCcCCHHHHHHHc------CccCCCHHHHHHHHH
Confidence 3444444332 45889999888887 244567777666553
No 290
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=34.23 E-value=47 Score=24.59 Aligned_cols=62 Identities=18% Similarity=0.216 Sum_probs=36.6
Q ss_pred CcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChHHHHhcCCC
Q 025118 169 GYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLP 237 (257)
Q Consensus 169 G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~~~~ 237 (257)
..++.+|+..++.. .|.. -+.+-.--...|+..+.+. ..++-++.+++|.++|.+++.-.+.
T Consensus 35 ~~~s~~eL~~~l~~----~~~~--~~~lin~~~~~~k~L~~~~-~~ls~~e~i~ll~~~P~LikRPIv~ 96 (132)
T PRK13344 35 EPLTKEEILAILTK----TENG--IESIVSSKNRYAKALDCDI-EELSVNEVIDLIQENPRILKSPILI 96 (132)
T ss_pred CCCCHHHHHHHHHH----hCCC--HHHhhccCcHHHHhCCcch-hcCCHHHHHHHHHhCccceeCcEEE
Confidence 34688888888742 2211 1111000123445555443 4688999999999999998855443
No 291
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=33.98 E-value=17 Score=33.75 Aligned_cols=36 Identities=6% Similarity=0.029 Sum_probs=31.7
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~~ 36 (257)
||-+-++++-+||-++|..|-|+.|+..++|++...
T Consensus 242 vS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D 277 (864)
T KOG4717|consen 242 VSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGD 277 (864)
T ss_pred hhHHHHHHHHHHHhcCchhhccHHHHhccccccCCC
Confidence 466788999999999999999999999999996543
No 292
>PF13720 Acetyltransf_11: Udp N-acetylglucosamine O-acyltransferase; Domain 2; PDB: 3I3A_A 3I3X_A 3HSQ_B 2JF2_A 1LXA_A 2AQ9_A 2QIV_X 2QIA_A 2JF3_A 4EQY_F ....
Probab=33.19 E-value=1.5e+02 Score=19.88 Aligned_cols=55 Identities=25% Similarity=0.324 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCCCC
Q 025118 72 SRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNG 132 (257)
Q Consensus 72 ~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g 132 (257)
..++.+++..+.++|..+-. +..+.++-...+.. ....++.+..+.+.+.....|
T Consensus 26 ~Gfs~~~i~~l~~ayr~l~~-----~~~~~~~a~~~l~~-~~~~~~~v~~~~~Fi~~S~RG 80 (83)
T PF13720_consen 26 RGFSKEEISALRRAYRILFR-----SGLTLEEALEELEE-EYPDSPEVREIVDFIRNSKRG 80 (83)
T ss_dssp TTS-HHHHHHHHHHHHHHHT-----SSS-HHHHHHHHHH-HTTSCHHHHHHHHHHHHTSS-
T ss_pred cCCCHHHHHHHHHHHHHHHh-----CCCCHHHHHHHHHH-hccCCHHHHHHHHHHHhCCCC
Confidence 57999999999999998852 33677776665544 123366777777776544433
No 293
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=32.74 E-value=16 Score=36.66 Aligned_cols=32 Identities=6% Similarity=-0.050 Sum_probs=29.4
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhcccc
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIP 33 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~ 33 (257)
+.++.+++.++|..+|..|+|+.+++.++|+.
T Consensus 268 S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik 299 (1021)
T PTZ00266 268 SKELNILIKNLLNLSAKERPSALQCLGYQIIK 299 (1021)
T ss_pred CHHHHHHHHHHhcCChhHCcCHHHHhccHHHh
Confidence 56788999999999999999999999999984
No 294
>cd08330 CARD_ASC_NALP1 Caspase activation and recruitment domain found in Human ASC, NALP1, and similar proteins. Caspase activation and recruitment domain (CARD) similar to those found in human ASC (Apoptosis-associated speck-like protein containing a CARD) and NALP1 (CARD7, NLRP1). ASC, an adaptor molecule, and NALP1, a member of the Nod-like receptor (NLR) family, are involved in the assembly of the 'inflammasome', a multiprotein platform, which is responsible for caspase-1 activation and regulation of IL-1beta maturation. In general, CARDs are death domains (DDs) associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and DED (Death Effector Domain). They se
Probab=32.71 E-value=1.2e+02 Score=20.31 Aligned_cols=54 Identities=15% Similarity=0.192 Sum_probs=35.0
Q ss_pred CCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH-hChHHHHh
Q 025118 167 QTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAV-RNPSLLKN 233 (257)
Q Consensus 167 ~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~-~~~~~~~~ 233 (257)
++|.|+.++...+.. ...+.+...+++ ... ...|...+.-|.+++. .+|.+..-
T Consensus 26 ~~~Vit~e~~~~I~a-------~~T~~~kar~Ll----d~l--~~kG~~A~~~F~~~L~e~~p~L~~~ 80 (82)
T cd08330 26 GKKVITQEQYSEVRA-------EKTNQEKMRKLF----SFV--RSWGASCKDIFYQILREEEPYLVED 80 (82)
T ss_pred HCCCCCHHHHHHHHc-------CCCcHHHHHHHH----HHH--HccCHHHHHHHHHHHHHhChHHHhH
Confidence 457899888888751 233344434433 333 3468899999999998 56766643
No 295
>cd06403 PB1_Par6 The PB1 domain is an essential part of Par6 protein which in complex with Par3 and aPKC proteins is crucial for establishment of apical-basal polarity of animal cells. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The
Probab=32.29 E-value=15 Score=24.57 Aligned_cols=63 Identities=17% Similarity=0.220 Sum_probs=34.9
Q ss_pred HHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCC-ccc-HHHHHHHHHhChHHHHh
Q 025118 160 FRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDG-RIN-KEEWKEFAVRNPSLLKN 233 (257)
Q Consensus 160 F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg-~I~-~~eF~~~l~~~~~~~~~ 233 (257)
|+-|-.+.+-.-+++||..++..++.-.+.... + ...|++||- .|+ =++|.+++...+.+++.
T Consensus 11 fRRFsl~r~~~~~f~ef~~ll~~lH~l~~~~f~-------i----~Y~D~~gDLLPInNDdNf~kAlssa~plLRl 75 (80)
T cd06403 11 FRRFSLDRNKPGKFEDFYKLLEHLHHIPNVDFL-------I----GYTDPHGDLLPINNDDNFLKALSSANPLLRI 75 (80)
T ss_pred EEEEEeccccCcCHHHHHHHHHHHhCCCCCcEE-------E----EEeCCCCCEecccCcHHHHHHHHcCCCceEE
Confidence 344444555667888888888766433322221 2 335665541 122 24788887776665544
No 296
>COG5394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.26 E-value=51 Score=25.37 Aligned_cols=21 Identities=38% Similarity=0.684 Sum_probs=15.4
Q ss_pred HhhCCCCCCcccHHHHHHHHH
Q 025118 161 RLYDLRQTGYIEREEVKQMVA 181 (257)
Q Consensus 161 ~~~D~d~~G~I~~~e~~~~l~ 181 (257)
++|+...+-+|+.+++..+++
T Consensus 19 RLYnT~TSTYVTL~dla~mVk 39 (193)
T COG5394 19 RLYNTGTSTYVTLEDLAQMVK 39 (193)
T ss_pred hhcccCCceeeeHHHHHHHHh
Confidence 456777777888888887774
No 297
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=31.63 E-value=1.4e+02 Score=21.67 Aligned_cols=67 Identities=25% Similarity=0.377 Sum_probs=42.9
Q ss_pred cccHHHHHHHHHHHHHhhcCCCCHHHHHHHHH---HHHHHcCCCCCCcccHHHHHHHHHhChHHHHhcCCCCcccccccc
Q 025118 170 YIEREEVKQMVAAILMESEIKLPDDLLEAIID---KTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLPYLTDITTIF 246 (257)
Q Consensus 170 ~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~---~~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~~~~~~~~~~~~~ 246 (257)
.++.++|.+++. ..|.. ++++++ ..|+..+.+ ...++-++....+..+|.+++.-.+..-+.+..-|
T Consensus 37 ~~s~~eL~~~l~----~~g~~-----~~~li~t~~~~~r~L~~~-~~~~~~~~~~~~i~~~~~LikRPivv~~~~~~iG~ 106 (117)
T COG1393 37 PPSREELKKILS----KLGDG-----VEELINTRGTTYRELNLD-KEDLSDEELIEALLENPSLIKRPIVVDNKKLRVGF 106 (117)
T ss_pred CCCHHHHHHHHH----HcCcc-----HHHHHHhccchHHHcCCc-ccccChHHHHHHHHhChhhccCCeEEeCCceEecC
Confidence 478888888873 33322 333332 466777743 34688888999999999888866555444455444
No 298
>PF05920 Homeobox_KN: Homeobox KN domain; InterPro: IPR008422 This entry represents a homeobox transcription factor KN domain conserved from fungi to human and plants [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3K2A_B 2LK2_A 1X2N_A 2DMN_A.
Probab=31.46 E-value=82 Score=17.95 Aligned_cols=28 Identities=11% Similarity=0.008 Sum_probs=19.8
Q ss_pred CCCCChHhHHHHHHhCCCCHHHHHHHHH
Q 025118 57 KCRFDVGDLARLAAESRFSVNELEALSE 84 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~ei~~l~~ 84 (257)
..+.+.++...++..+.++..+|...+.
T Consensus 8 nPYPs~~ek~~L~~~tgls~~Qi~~WF~ 35 (40)
T PF05920_consen 8 NPYPSKEEKEELAKQTGLSRKQISNWFI 35 (40)
T ss_dssp SGS--HHHHHHHHHHHTS-HHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 3467788888889999999999887653
No 299
>PF05674 DUF816: Baculovirus protein of unknown function (DUF816); InterPro: IPR008534 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf106. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family includes proteins that are about 200 amino acids in length. The proteins are all from baculoviruses. This family includes ORF107 from Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV) and a variety of other numbered ORF proteins, such as ORF52 Q91F03 from SWISSPROT, ORF140 Q9YMI8 from SWISSPROT from other baculoviruses. The function of these proteins is unknown.
Probab=31.39 E-value=2.4e+02 Score=21.70 Aligned_cols=72 Identities=18% Similarity=0.175 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChHHHHhcCCCCccccccccCccee
Q 025118 175 EVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLPYLTDITTIFPSFVF 251 (257)
Q Consensus 175 e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (257)
...++++....+.....++...+. ++.+|...-- =+..|+|.+|-+.+.. +.-.+++..+++.-++..++++
T Consensus 29 nvl~iik~A~~ey~~~Pt~~Ny~~-iKkLf~qtkY-vddsIdyKnfnRr~~l---Ia~k~~lnk~k~~f~~yk~~~e 100 (171)
T PF05674_consen 29 NVLAIIKTARDEYFENPTDKNYEN-IKKLFSQTKY-VDDSIDYKNFNRRILL---IAFKFILNKSKDYFPNYKSFIE 100 (171)
T ss_pred HHHHHHHHHHHHHhcCCChhhHHH-HHHHHHHhhh-hhcchhhhhhhhHHHH---HHHHHHHhhhhHhhhhhHHHHH
Confidence 344455544455555555544443 4445544322 2346899999888764 4445666677765555555543
No 300
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=30.99 E-value=25 Score=30.74 Aligned_cols=36 Identities=14% Similarity=0.050 Sum_probs=31.3
Q ss_pred CCchhhhHhhhhccCCCCCcc----ccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSL----TFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rl----s~~e~~~~~~~~~~~ 36 (257)
+|.+|++++.++|.+|++.|+ .+.++..||++....
T Consensus 249 ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~in 288 (357)
T KOG0598|consen 249 LSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGIN 288 (357)
T ss_pred CCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCC
Confidence 478999999999999999997 678889999887655
No 301
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=30.96 E-value=22 Score=33.36 Aligned_cols=33 Identities=12% Similarity=0.023 Sum_probs=30.2
Q ss_pred CchhhhHhhhhccCCCCCccccccchhhccccch
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICAACIPLI 35 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~~~~ 35 (257)
|+++++.|-++|-. .+.|+|+.|+++++++...
T Consensus 270 dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 270 DPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred CHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 68999999999999 9999999999999998654
No 302
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=30.88 E-value=27 Score=32.06 Aligned_cols=32 Identities=13% Similarity=0.062 Sum_probs=29.8
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccc
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACI 32 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~ 32 (257)
.+++|-+++=.+|..||+.|.||..++.+.|+
T Consensus 372 ~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 372 FPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred CCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 46889999999999999999999999999998
No 303
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=30.22 E-value=25 Score=30.76 Aligned_cols=36 Identities=6% Similarity=-0.180 Sum_probs=28.5
Q ss_pred CCchhhhHhhhhccCCC--CCccccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDG--SSSLTFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~--~~rls~~e~~~~~~~~~~~ 36 (257)
+++++++++-++|..++ .+|.++.+++.|+|+....
T Consensus 274 ~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~ 311 (371)
T cd05622 274 ISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ 311 (371)
T ss_pred CCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCC
Confidence 46789999999997433 3588999999999996543
No 304
>cd07316 terB_like_DjlA N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins. Tellurium resistance terB-like domain of the DnaJ-like DjlA proteins. This family represents the terB-like domain of DjlA-like proteins, a subgroup of heat shock DnaJ-like proteins. Escherichia coli DjlA is a type III membrane protein with a small N-terminal transmembrane region and DnaJ-like domain on the extreme C-terminus. Overproduction has been shown to activate the RcsC pathway, which regulates the production of the capsular exopolysaccharide colanic acid. The specific function of this domain is unknown.
Probab=30.05 E-value=1.9e+02 Score=19.88 Aligned_cols=12 Identities=33% Similarity=0.612 Sum_probs=7.3
Q ss_pred cCCCCCHHHHHH
Q 025118 95 KDGLIHKEELQV 106 (257)
Q Consensus 95 ~~G~i~~~ef~~ 106 (257)
-||.++..|...
T Consensus 12 aDG~v~~~E~~~ 23 (106)
T cd07316 12 ADGRVSEAEIQA 23 (106)
T ss_pred ccCCcCHHHHHH
Confidence 466666666544
No 305
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=30.01 E-value=61 Score=30.36 Aligned_cols=30 Identities=7% Similarity=0.020 Sum_probs=26.0
Q ss_pred hhhHhhhhccCCCCCccccccchhhccccc
Q 025118 5 ANRSFLRAFDYDGSSSLTFGERICAACIPL 34 (257)
Q Consensus 5 a~~~~f~~ld~~~~~rls~~e~~~~~~~~~ 34 (257)
|-+.+..+|-+||+.|.|..|+++||++..
T Consensus 603 li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 603 LIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred HHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 556777899999999999999999998854
No 306
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=29.35 E-value=2.8e+02 Score=27.58 Aligned_cols=151 Identities=14% Similarity=0.149 Sum_probs=79.2
Q ss_pred CCHHHHHH-HHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCC--hHHHHHHHHHHcCCCCCcccHHHHHHHHHhhC-CC
Q 025118 74 FSVNELEA-LSELYKNLSCSIIKDGLIHKEELQVALFQAPYGE--NLFLDRVFDLFDEKKNGVIDFEEFVHALNVFH-PY 149 (257)
Q Consensus 74 ~~~~ei~~-l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~--~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~-~~ 149 (257)
.++.+|.. ++..+...|.. .-..|+..++...|.+.+... ......-|..... +.+.++|++|..+...+. +.
T Consensus 137 ~~p~qI~~wlrk~~ysvd~~--~~~~isard~k~~l~qvn~k~~~~kfl~e~~ted~~-~k~dlsf~~f~~ly~~lmfs~ 213 (1267)
T KOG1264|consen 137 PTPLQIERWLRKQIYSVDQT--RENSISARDLKTILPQVNFKVSSAKFLKEKFTEDGA-RKDDLSFEQFHLLYKKLMFSQ 213 (1267)
T ss_pred CChHHHHHHHHhhheeccch--hhhheeHHhhhcccccceEEechHHHHHHHHhHhhh-ccccccHHHHHHHHHHHhhcc
Confidence 34455554 34567777754 555699999998876644332 2233333444333 456899999988766553 11
Q ss_pred -CChHHHHHHHHHh--hCCCCCCcccHHHHHHHHHHHH-HhhcCCCCHHHHHHHHHHHHHHc-CCCCCCcccHHHHHHHH
Q 025118 150 -APIEDKIDFAFRL--YDLRQTGYIEREEVKQMVAAIL-MESEIKLPDDLLEAIIDKTFADA-DIDKDGRINKEEWKEFA 224 (257)
Q Consensus 150 -~~~~~~~~~~F~~--~D~d~~G~I~~~e~~~~l~~~~-~~~g~~~s~~~~~~~~~~~f~~~-d~~~dg~I~~~eF~~~l 224 (257)
..........|-+ -+...--.++..||.+++..-- ..+....+ .+++.+..+.+.. -......+...||+.+|
T Consensus 214 ~~a~l~e~~~~~~~~~~~~~d~~vV~~~ef~rFL~~~Q~e~~Asdr~--av~~~~r~F~~D~~re~~EPyl~v~EFv~fL 291 (1267)
T KOG1264|consen 214 QKAILLEFKKDFILGNTDRPDASVVYLQEFQRFLIHEQQEHWASDRN--AVREFMRKFIDDTMRETAEPYLFVDEFVTFL 291 (1267)
T ss_pred chhhhhcccchhhhcCCCCccceEeeHHHHHHHHHhhhHHHhhhHHH--HHHHHHHHHHhhhhhhccCcceeHHHHHHHH
Confidence 1111111111111 1222225799999999985210 11111112 3444343322211 11234689999999999
Q ss_pred HhChH
Q 025118 225 VRNPS 229 (257)
Q Consensus 225 ~~~~~ 229 (257)
-...+
T Consensus 292 FSreN 296 (1267)
T KOG1264|consen 292 FSREN 296 (1267)
T ss_pred hhccc
Confidence 77543
No 307
>PRK12559 transcriptional regulator Spx; Provisional
Probab=28.96 E-value=90 Score=23.04 Aligned_cols=62 Identities=18% Similarity=0.311 Sum_probs=37.1
Q ss_pred CcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChHHHHhcCCC
Q 025118 169 GYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLP 237 (257)
Q Consensus 169 G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~~~~ 237 (257)
..++.+|+..++. ..|.. -.++-.--...|+..+.+. ..++-++.+++|.++|.+++.-.+.
T Consensus 35 ~~~s~~el~~~l~----~~~~g--~~~lin~~~~~~k~l~~~~-~~ls~~e~i~ll~~~P~LikRPIi~ 96 (131)
T PRK12559 35 NSMTVDELKSILR----LTEEG--ATEIISTRSKTFQDLNINI-EELSLNEFYKLIIEHPLMLRRPIML 96 (131)
T ss_pred CcCCHHHHHHHHH----HcCCC--HHHHHhcCcHHHHhCCCCc-ccCCHHHHHHHHHhCcceEeCCEEE
Confidence 3467788888773 22211 1111111123556666554 3578899999999999998855443
No 308
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=28.91 E-value=84 Score=22.52 Aligned_cols=35 Identities=11% Similarity=0.270 Sum_probs=24.9
Q ss_pred HHHHcCCCCCCcccHHHHHHHHHhChHHHHhcCCCC
Q 025118 203 TFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLPY 238 (257)
Q Consensus 203 ~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~~~~~ 238 (257)
.|+....+. ..++-++.+++|.++|.+++.-.+..
T Consensus 61 ~~r~~~~~~-~~ls~~e~~~ll~~~P~LikRPIv~~ 95 (113)
T cd03033 61 RVKSGEVVP-EALDEEEALALMIADPLLIRRPLMQV 95 (113)
T ss_pred HHHhcCCCc-cCCCHHHHHHHHHhCcceeeCCeEEE
Confidence 445444433 45799999999999999998665443
No 309
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=28.84 E-value=27 Score=29.86 Aligned_cols=36 Identities=11% Similarity=-0.082 Sum_probs=27.6
Q ss_pred CCchhhhHhhhhccCCC--CCccccccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDG--SSSLTFGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~--~~rls~~e~~~~~~~~~~~ 36 (257)
++.+|++.+.++|..++ .+|.++++++.|+|+....
T Consensus 236 ~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~ 273 (331)
T cd05624 236 VSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGID 273 (331)
T ss_pred CCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCC
Confidence 36789999999887543 3467899999999987543
No 310
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=28.50 E-value=27 Score=33.79 Aligned_cols=32 Identities=16% Similarity=0.255 Sum_probs=29.7
Q ss_pred CCchhhhHhhhhccCCCCCccccccchhhccc
Q 025118 1 MDSSANRSFLRAFDYDGSSSLTFGERICAACI 32 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls~~e~~~~~~~ 32 (257)
+|.+||-.+.+++..++..|.+|...+..|++
T Consensus 804 lsaeak~FilrcFepd~~~R~sA~~LL~DpFl 835 (1226)
T KOG4279|consen 804 LSAEAKNFILRCFEPDPCDRPSAKDLLQDPFL 835 (1226)
T ss_pred HHHHHHHHHHHHcCCCcccCccHHHhccCccc
Confidence 46789999999999999999999999999987
No 311
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=28.38 E-value=1.1e+02 Score=22.49 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=24.9
Q ss_pred HHHHcCCCCCCcccHHHHHHHHHhChHHHHhcCCC
Q 025118 203 TFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLP 237 (257)
Q Consensus 203 ~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~~~~ 237 (257)
.|+....+. ..++-+|++++|.++|.+++.-.+.
T Consensus 63 ~~k~l~~~~-~~ls~~e~i~ll~~~p~LikRPIi~ 96 (131)
T PRK01655 63 VFQKLNVDV-ESLSLQDLIKLISDNPGLLRRPIII 96 (131)
T ss_pred HHHhCCCCc-ccCCHHHHHHHHHhCcceEeCCEEE
Confidence 456665544 3588999999999999998855433
No 312
>KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only]
Probab=27.97 E-value=1.1e+02 Score=27.62 Aligned_cols=58 Identities=22% Similarity=0.198 Sum_probs=29.5
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q 025118 119 LDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMV 180 (257)
Q Consensus 119 ~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l 180 (257)
++.|-+.+|-|.+|.|+.+|=-.++..-........+-...|.. .|..|+.+|+-...
T Consensus 70 ir~iHrqmDDD~nG~Id~~ESdeFlrEdmky~~~~~kr~~~fH~----dD~~ItVedLWeaW 127 (575)
T KOG4403|consen 70 IRDIHRQMDDDHNGSIDVEESDEFLREDMKYRDSTRKRSEKFHG----DDKHITVEDLWEAW 127 (575)
T ss_pred HHHHHHhcccccCCCcccccchHHHHHHhhcccchhhhhhhccC----CccceeHHHHHHHH
Confidence 45555566666666666655444444433333333333334432 23456666666655
No 313
>KOG2419 consensus Phosphatidylserine decarboxylase [Lipid transport and metabolism]
Probab=27.74 E-value=59 Score=30.87 Aligned_cols=91 Identities=13% Similarity=0.080 Sum_probs=59.5
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhc-CCCCHHHHHHH---HHHHHHHcCCCCC-----------------
Q 025118 154 DKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESE-IKLPDDLLEAI---IDKTFADADIDKD----------------- 212 (257)
Q Consensus 154 ~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g-~~~s~~~~~~~---~~~~f~~~d~~~d----------------- 212 (257)
--.+.++..+|.+.++.+++.++..+..++...+- ..+. +..+ ...+|..+|.+|+
T Consensus 437 c~~~~~~s~~d~~~~fk~sf~~~~~l~~~F~~vvaa~~~~---~~D~~~~k~~~~~~lDl~g~~~~~~~~~~lYs~vS~~ 513 (975)
T KOG2419|consen 437 CFAKRILSIVDYEEDFKLSFSEFSDLSFAFGNVVAANKLA---WFDMLNEKEELFKALDLNGDPAHAPKQPVLYSYVSYP 513 (975)
T ss_pred hhhhhcccccccccCceEeeehHHHHHHHHHHHHHhhhcc---hhhhcccchhheehhhccCCcccCccccchhhhcccc
Confidence 34567888899999999999999888766532210 1111 1111 2346788899999
Q ss_pred ------CcccHHHHHHHHHhChHHHHhcCCCCccccccccCcc
Q 025118 213 ------GRINKEEWKEFAVRNPSLLKNMTLPYLTDITTIFPSF 249 (257)
Q Consensus 213 ------g~I~~~eF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (257)
|.++.+|.+.++... +.++|-.....++...+|.+
T Consensus 514 ~~~~s~~~vtVDe~v~ll~~~--i~~V~~~~er~tq~~q~p~~ 554 (975)
T KOG2419|consen 514 FLKKSFGVVTVDELVALLALD--IIQVMLYLERLTQQEQEPII 554 (975)
T ss_pred ccccccCeeEHHHHHHHHHHH--HHHHHHHHHHhhhccccchh
Confidence 999999999998864 44555444444455555544
No 314
>cd00086 homeodomain Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
Probab=27.57 E-value=1.2e+02 Score=18.07 Aligned_cols=29 Identities=10% Similarity=-0.018 Sum_probs=24.1
Q ss_pred CCCCChHhHHHHHHhCCCCHHHHHHHHHH
Q 025118 57 KCRFDVGDLARLAAESRFSVNELEALSEL 85 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~ei~~l~~~ 85 (257)
....+..++..++..+.++..+|..++.-
T Consensus 22 ~~~P~~~~~~~la~~~~l~~~qV~~WF~n 50 (59)
T cd00086 22 NPYPSREEREELAKELGLTERQVKIWFQN 50 (59)
T ss_pred CCCCCHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 34688889999999999999999887653
No 315
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=26.95 E-value=1.6e+02 Score=28.28 Aligned_cols=80 Identities=21% Similarity=0.316 Sum_probs=56.3
Q ss_pred CCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhC-------CCCChHHHHHHHHHhhCCCCC
Q 025118 96 DGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFH-------PYAPIEDKIDFAFRLYDLRQT 168 (257)
Q Consensus 96 ~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~-------~~~~~~~~~~~~F~~~D~d~~ 168 (257)
+| ++.+|+. ...-..++.++.+|..+|. ++|.++-+++...+.... ......+....++...|.++.
T Consensus 2 ~~-~~~~~~~----~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (646)
T KOG0039|consen 2 EG-ISFQELK----ITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANWLSLIKKQTEEYAALIMEELDPDHK 75 (646)
T ss_pred CC-cchhhhc----ccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhhhcccccc
Confidence 46 8888887 1223335567888888888 888888888877655442 112233445678888899999
Q ss_pred CcccHHHHHHHHH
Q 025118 169 GYIEREEVKQMVA 181 (257)
Q Consensus 169 G~I~~~e~~~~l~ 181 (257)
|++..+++.-++.
T Consensus 76 ~y~~~~~~~~ll~ 88 (646)
T KOG0039|consen 76 GYITNEDLEILLL 88 (646)
T ss_pred ceeeecchhHHHH
Confidence 9999999888874
No 316
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=26.51 E-value=2.1e+02 Score=19.47 Aligned_cols=50 Identities=10% Similarity=0.175 Sum_probs=37.3
Q ss_pred cccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHH
Q 025118 133 VIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAI 183 (257)
Q Consensus 133 ~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~ 183 (257)
.||.+|++.+..... -......++.+...+-.+.=...+.++-..+++.+
T Consensus 14 ~iT~~eLlkyskqy~-i~it~~QA~~I~~~lr~k~inIfn~~~r~~llkei 63 (85)
T PF11116_consen 14 NITAKELLKYSKQYN-ISITKKQAEQIANILRGKNINIFNEQERKKLLKEI 63 (85)
T ss_pred cCCHHHHHHHHHHhC-CCCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 588888888877775 56667778888888866666777777777777654
No 317
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=26.26 E-value=33 Score=29.29 Aligned_cols=28 Identities=11% Similarity=-0.008 Sum_probs=23.9
Q ss_pred CchhhhHhhhhccCCCCCccccccchhh
Q 025118 2 DSSANRSFLRAFDYDGSSSLTFGERICA 29 (257)
Q Consensus 2 ~~~a~~~~f~~ld~~~~~rls~~e~~~~ 29 (257)
+++.++.+.+++..++..|+|+.|++.+
T Consensus 262 ~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 262 THELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred CHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 4567889999999999999999997655
No 318
>TIGR00988 hip integration host factor, beta subunit. This protein forms a site-specific DNA-binding heterodimer with the homologous integration host factor alpha subunit. It is closely related to the DNA-binding protein HU.
Probab=26.11 E-value=68 Score=21.92 Aligned_cols=46 Identities=15% Similarity=0.310 Sum_probs=25.0
Q ss_pred cHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHc--CCCCCCcccHHHHH
Q 025118 172 EREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADA--DIDKDGRINKEEWK 221 (257)
Q Consensus 172 ~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~--d~~~dg~I~~~eF~ 221 (257)
+..||...+. .....++..+++.+++.++..+ ....++.|.+.+|-
T Consensus 2 ~k~eli~~i~----~~~~~~s~~~v~~vv~~~~~~i~~~L~~g~~V~l~gfG 49 (94)
T TIGR00988 2 TKSELIERIA----TQQSHLPAKDVEDAVKTMLEHMASALAQGDRIEIRGFG 49 (94)
T ss_pred CHHHHHHHHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHcCCeEEEcCcE
Confidence 4566666552 2233467777777676666554 22344556655553
No 319
>PF05872 DUF853: Bacterial protein of unknown function (DUF853); InterPro: IPR008571 Members of this family have a P-loop containing nucleotide triphosphate hydrolases fold. This family is restricted to bacterial proteins, none of which have currently been characterised.
Probab=25.99 E-value=2.1e+02 Score=26.32 Aligned_cols=105 Identities=18% Similarity=0.207 Sum_probs=64.2
Q ss_pred CCCHHHHHHHHhc--CCCCC--hHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccH
Q 025118 98 LIHKEELQVALFQ--APYGE--NLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIER 173 (257)
Q Consensus 98 ~i~~~ef~~~l~~--~~~~~--~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~ 173 (257)
+-+..||-=.|.. +.+.. ...+..+|+..|.++=-.|+..++..++..+. +..+..-. .-|.|+.
T Consensus 105 RaTvsemGPlLLsrlL~LNdtQ~gvL~i~F~~ADd~gLlLlDLkDLra~l~~v~------e~~~e~~~-----~yG~is~ 173 (502)
T PF05872_consen 105 RATVSEMGPLLLSRLLELNDTQEGVLNIVFRIADDEGLLLLDLKDLRAMLQYVS------ENAKELSA-----EYGNISS 173 (502)
T ss_pred EeeHHhhchHHHHHHhccchHHHHHHHHHHHHhccCCCccccHHHHHHHHHHHH------hhHHHHHH-----HcCCccH
Confidence 3556666544432 22322 33588899999999888899999999988774 22333323 3388898
Q ss_pred HHHHHHHHHHHHh--hc----CCCCHHHHHHHHHHHHHHcCCCCCCcccHH
Q 025118 174 EEVKQMVAAILME--SE----IKLPDDLLEAIIDKTFADADIDKDGRINKE 218 (257)
Q Consensus 174 ~e~~~~l~~~~~~--~g----~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~ 218 (257)
.-.-.+++++... -| ..-+.-+++. +++ .|.+|.|.|+.=
T Consensus 174 aS~gaI~R~ll~LE~qG~d~FFGEPaldi~D----l~r-~~~~GrG~IniL 219 (502)
T PF05872_consen 174 ASIGAIQRALLVLEQQGGDQFFGEPALDIED----LMR-TDADGRGVINIL 219 (502)
T ss_pred HHHHHHHHHHHHHHHcchHhhCCCccCCHHH----Hhc-cCCCCCEEEEEE
Confidence 8888888776421 11 1111112333 333 578899987743
No 320
>PF09373 PMBR: Pseudomurein-binding repeat; InterPro: IPR018975 Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) is a methanogenic Gram-positive microorganism with a cell wall consisting of pseudomurein. This repeat specifically binds to pseudomurein. This repeat is found at the N terminus of PeiW and PeiP which are pseudomurein binding phage proteins.
Probab=25.71 E-value=75 Score=17.18 Aligned_cols=14 Identities=29% Similarity=0.529 Sum_probs=7.3
Q ss_pred CCcccHHHHHHHHH
Q 025118 131 NGVIDFEEFVHALN 144 (257)
Q Consensus 131 ~g~I~f~ef~~~~~ 144 (257)
.|.|+++|++.+..
T Consensus 2 ~~~i~~~~~~d~a~ 15 (33)
T PF09373_consen 2 SGTISKEEYLDMAS 15 (33)
T ss_pred CceecHHHHHHHHH
Confidence 34555555555544
No 321
>PF12872 OST-HTH: OST-HTH/LOTUS domain; PDB: 2KPM_A 3S93_B 3RCO_A 2KZV_A.
Probab=25.46 E-value=1.9e+02 Score=18.39 Aligned_cols=19 Identities=26% Similarity=0.080 Sum_probs=11.9
Q ss_pred HHcCCCCCCcccHHHHHHH
Q 025118 205 ADADIDKDGRINKEEWKEF 223 (257)
Q Consensus 205 ~~~d~~~dg~I~~~eF~~~ 223 (257)
..+|...=|.-++.+|++.
T Consensus 38 ~~f~~~~yG~~~l~~ll~~ 56 (74)
T PF12872_consen 38 PDFDPRDYGFSSLSELLES 56 (74)
T ss_dssp TT--TCCTTSSSHHHHHHT
T ss_pred CCCCccccCCCcHHHHHHh
Confidence 5567777777777777753
No 322
>PF08557 Lipid_DES: Sphingolipid Delta4-desaturase (DES); InterPro: IPR013866 Sphingolipids are important membrane signalling molecules involved in many different cellular functions in eukaryotes. Sphingolipid delta 4-desaturase catalyses the formation of (E)-sphing-4-enine []. Some proteins in this entry have bifunctional delta 4-desaturase/C-4-hydroxylase activity. Delta 4-desaturated sphingolipids may play a role in early signalling required for entry into meiotic and spermatid differentiation pathways during Drosophila spermatogenesis []. This small protein associates with FA_desaturase IPR005804 from INTERPRO and appears to be specific to sphingolipid delta 4-desaturase. ; GO: 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=25.41 E-value=82 Score=18.03 Aligned_cols=19 Identities=32% Similarity=0.328 Sum_probs=14.8
Q ss_pred HHHHHhChHHHHhcCCCCc
Q 025118 221 KEFAVRNPSLLKNMTLPYL 239 (257)
Q Consensus 221 ~~~l~~~~~~~~~~~~~~~ 239 (257)
..+|.++|.+..+||.++.
T Consensus 20 k~IL~k~PeIk~L~G~dp~ 38 (39)
T PF08557_consen 20 KEILKKHPEIKKLMGPDPL 38 (39)
T ss_pred HHHHHhChHHHHHhCCCCC
Confidence 3578889999999987654
No 323
>COG3793 TerB Tellurite resistance protein [Inorganic ion transport and metabolism]
Probab=25.25 E-value=2.3e+02 Score=21.40 Aligned_cols=17 Identities=24% Similarity=0.362 Sum_probs=8.7
Q ss_pred CCCcccHHHHHHHHHhh
Q 025118 130 KNGVIDFEEFVHALNVF 146 (257)
Q Consensus 130 ~~g~I~f~ef~~~~~~~ 146 (257)
-||.++-+|-..++...
T Consensus 37 adg~~~~~e~~~~~~~~ 53 (144)
T COG3793 37 ADGEVDSEEKQKMVQFL 53 (144)
T ss_pred cccccChHHHHHHHHHH
Confidence 35555555555554443
No 324
>PF08260 Kinin: Insect kinin peptide; InterPro: IPR013202 This entry represents neuropeptides that are the first members of the insect kinin-family isolated from the American cockroach. Their occurrence in the retrocerebral complex suggests a physiological role as a neurohormone. The C-terminal sequence Phe-X-Ser-Trp-Gly-NH2 characterised the peptides as members of the insect kinin family. Data suggest a possible involvement of insect kinins in water-balance by regulating the osmoregulation. Insect kinins also mediate visceral muscle contractile activity (myotropic activity) []. These peptides have lengths ranging from 6 to 14 amino acids [].
Probab=25.05 E-value=31 Score=12.46 Aligned_cols=6 Identities=33% Similarity=0.622 Sum_probs=3.6
Q ss_pred cccCcc
Q 025118 244 TIFPSF 249 (257)
Q Consensus 244 ~~~~~~ 249 (257)
++|-||
T Consensus 2 pafnsw 7 (8)
T PF08260_consen 2 PAFNSW 7 (8)
T ss_pred cccccc
Confidence 456666
No 325
>PF09873 DUF2100: Uncharacterized protein conserved in archaea (DUF2100); InterPro: IPR019210 This entry represents various hypothetical archaeal proteins, and has no known function.
Probab=25.05 E-value=1.8e+02 Score=23.47 Aligned_cols=18 Identities=44% Similarity=0.569 Sum_probs=12.6
Q ss_pred CCCcccHHHHHHHHHhhC
Q 025118 130 KNGVIDFEEFVHALNVFH 147 (257)
Q Consensus 130 ~~g~I~f~ef~~~~~~~~ 147 (257)
..|.|+-++|..++..+.
T Consensus 38 k~G~Id~~e~kkav~~li 55 (215)
T PF09873_consen 38 KPGKIDVEEFKKAVYSLI 55 (215)
T ss_pred CCCcccHHHHHHHHHHHH
Confidence 567777777777776553
No 326
>TIGR02675 tape_meas_nterm tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.
Probab=24.93 E-value=2.1e+02 Score=18.77 Aligned_cols=36 Identities=19% Similarity=0.159 Sum_probs=28.1
Q ss_pred hCCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhc
Q 025118 71 ESRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQ 110 (257)
Q Consensus 71 ~~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~ 110 (257)
....+.+++......|...- ..|++.-+||...+..
T Consensus 7 ~~G~s~e~~~~~~~ql~Q~~----~~Gkv~~ee~n~~~e~ 42 (75)
T TIGR02675 7 ASGASAEEADGALIQLSQML----ASGKLRGEEINSLLEA 42 (75)
T ss_pred HhCCCHHHHHHHHHHHHHHH----HcCcccHHHHHHHHHH
Confidence 34567788888888887664 7899999999988754
No 327
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=24.91 E-value=32 Score=29.53 Aligned_cols=36 Identities=8% Similarity=0.043 Sum_probs=29.5
Q ss_pred CCchhhhHhhhhccCCCCCccc-----cccchhhccccchh
Q 025118 1 MDSSANRSFLRAFDYDGSSSLT-----FGERICAACIPLIA 36 (257)
Q Consensus 1 ~~~~a~~~~f~~ld~~~~~rls-----~~e~~~~~~~~~~~ 36 (257)
.||.|++++..+|++|.+.|+- ..++..|||+....
T Consensus 264 fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 264 FSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred cCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence 4789999999999999998843 45688999997544
No 328
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=24.65 E-value=1.2e+02 Score=16.05 Aligned_cols=13 Identities=31% Similarity=0.432 Sum_probs=10.1
Q ss_pred cCCCCCHHHHHHH
Q 025118 95 KDGLIHKEELQVA 107 (257)
Q Consensus 95 ~~G~i~~~ef~~~ 107 (257)
..|.||.+||...
T Consensus 13 ~~G~IseeEy~~~ 25 (31)
T PF09851_consen 13 DKGEISEEEYEQK 25 (31)
T ss_pred HcCCCCHHHHHHH
Confidence 4688999988764
No 329
>TIGR00624 tag DNA-3-methyladenine glycosylase I. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=24.60 E-value=29 Score=27.26 Aligned_cols=46 Identities=17% Similarity=0.281 Sum_probs=33.6
Q ss_pred hHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHH
Q 025118 152 IEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIID 201 (257)
Q Consensus 152 ~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~ 201 (257)
..+..+.+|.-||.+.=-..+.+++.+++ ...+.--...-++.++.
T Consensus 51 Kr~~fr~aF~~Fd~~~VA~~~e~~ie~L~----~d~~IIRnr~KI~Avi~ 96 (179)
T TIGR00624 51 KRENYRRAFSGFDIVKVARMTDADVERLL----QDDGIIRNRGKIEATIA 96 (179)
T ss_pred hHHHHHHHHcCCCHHHHhCCCHHHHHHHh----cCccchhhHHHHHHHHH
Confidence 44678899999999888888999999887 44454444445566565
No 330
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=24.12 E-value=1.2e+02 Score=22.23 Aligned_cols=35 Identities=11% Similarity=0.288 Sum_probs=25.4
Q ss_pred HHHHcCCCCCCcccHHHHHHHHHhChHHHHhcCCCC
Q 025118 203 TFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLPY 238 (257)
Q Consensus 203 ~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~~~~~ 238 (257)
.|+..+.+. ..++-++.+++|.++|.+++.-.+..
T Consensus 62 ~~r~l~~~~-~~ls~~e~i~lm~~~P~LIKRPIi~~ 96 (126)
T TIGR01616 62 RVKSGEVNP-DSIDEASALALMVSDPLLIRRPLMDL 96 (126)
T ss_pred HhhhCCCCc-ccCCHHHHHHHHHhCcCeEeCCEEEE
Confidence 345555433 46889999999999999998665543
No 331
>KOG1954 consensus Endocytosis/signaling protein EHD1 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=23.96 E-value=1.1e+02 Score=27.39 Aligned_cols=44 Identities=36% Similarity=0.573 Sum_probs=0.0
Q ss_pred CCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHH
Q 025118 168 TGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINKEEWK 221 (257)
Q Consensus 168 ~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~ 221 (257)
+|+|+-..-+.-+ .+..+++..+-+++ +..|.|+||.++-+||.
T Consensus 457 ~gk~sg~~ak~~m------v~sklpnsvlgkiw----klad~d~dg~ld~eefa 500 (532)
T KOG1954|consen 457 NGKLSGRNAKKEM------VKSKLPNSVLGKIW----KLADIDKDGMLDDEEFA 500 (532)
T ss_pred CceeccchhHHHH------HhccCchhHHHhhh----hhhcCCcccCcCHHHHH
No 332
>cd01657 Ribosomal_L7_archeal_euk Ribosomal protein L7, which is found in archaea and eukaryotes but not in prokaryotes, binds domain II of the 23S rRNA as well as the 5S rRNA and is one of five ribosomal proteins that mediate the interactions 5S rRNA makes with the ribosome. The eukaryotic L7 members have an N-terminal extension not found in the archeal L7 orthologs. L7 is closely related to the ribosomal L30 protein found in eukaryotes and prokaryotes.
Probab=23.78 E-value=2.4e+02 Score=21.69 Aligned_cols=69 Identities=19% Similarity=0.324 Sum_probs=38.4
Q ss_pred CcccHHHHHHHHHHHH-Hhhc---CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChHHHHhcCCCCcccccc
Q 025118 169 GYIEREEVKQMVAAIL-MESE---IKLPDDLLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLPYLTDITT 244 (257)
Q Consensus 169 G~I~~~e~~~~l~~~~-~~~g---~~~s~~~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~~~~~~~~~~~ 244 (257)
|.++.+-++.++..-- ...+ ..+++..+.+ ..+ ..|.++.+|+++.+..-- ++.+++..
T Consensus 55 ge~~~~tv~~Li~kRG~~~~~~~~~~ltdn~iie------~~l---~~gi~ciedlv~~i~~~~--------~~f~~~~~ 117 (159)
T cd01657 55 GEPNLETLRELIYKRGRLKGNGQRIPLTDNYLVE------KTL---KKGIICIEDLAHEIYTGG--------PNFKEVNN 117 (159)
T ss_pred ccCcHHHHHHHHHHhCeecCCCeeeeCChHHHHH------HHc---ccCcccHHHHHHHHHhCc--------cCHHHhhc
Confidence 5555665666553211 0111 4667665433 112 348999999999887653 23333445
Q ss_pred ccCcceeecc
Q 025118 245 IFPSFVFNTE 254 (257)
Q Consensus 245 ~~~~~~~~~~ 254 (257)
..|+|-+|..
T Consensus 118 ~l~pF~L~~P 127 (159)
T cd01657 118 FLPPFRLHPP 127 (159)
T ss_pred cCCCeECCCc
Confidence 5577777754
No 333
>PRK12461 UDP-N-acetylglucosamine acyltransferase; Provisional
Probab=23.59 E-value=3.6e+02 Score=22.43 Aligned_cols=55 Identities=20% Similarity=0.254 Sum_probs=36.3
Q ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHHHcCCCCC
Q 025118 72 SRFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDLFDEKKNG 132 (257)
Q Consensus 72 ~~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g 132 (257)
..|+++++..+++.|+.+- .+ .++.++-...+.. .....++++.+.+.+...+.|
T Consensus 198 ~g~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~f~~~s~rg 252 (255)
T PRK12461 198 RGFSSRAIRALKRAYKIIY----RS-GLSVQQAVAELEL-QQFESPEVEELIDFIKASKRG 252 (255)
T ss_pred cCCCHHHHHHHHHHHHHHH----hc-CCCHHHHHHHHHH-hccCCHHHHHHHHHHHccCCC
Confidence 5789999999999998874 22 3566665554543 133456677777777554444
No 334
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=23.32 E-value=3.2e+02 Score=25.17 Aligned_cols=71 Identities=18% Similarity=0.226 Sum_probs=49.3
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcC-----CCCCCcccHHHHHHHHHhChHH
Q 025118 156 IDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADAD-----IDKDGRINKEEWKEFAVRNPSL 230 (257)
Q Consensus 156 ~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d-----~~~dg~I~~~eF~~~l~~~~~~ 230 (257)
-..+|.+|-..+++.+..-.|..++ +..|..-++--+.++++.+= .+| ....+.++.+-|.+++.....+
T Consensus 88 eDLLFyLiaegq~ekipihKFiTAL----kstGLrtsDPRLk~mMd~mK-d~dq~~~e~S~gw~LdKDlFKkcI~sSI~l 162 (622)
T KOG0506|consen 88 EDLLFYLIAEGQSEKIPIHKFITAL----KSTGLRTSDPRLKDMMDEMK-DVDQEENESSSGWLLDKDLFKKCIFSSIVL 162 (622)
T ss_pred hhhhhHHhhcCCcCcccHHHHHHHH----HHcCCCcCCchHHHHHHHHH-HHHhhhcccccceeecHHHHHHhhccchhH
Confidence 3467888877777999999999998 45676666655555554432 223 2344689999999999876554
Q ss_pred H
Q 025118 231 L 231 (257)
Q Consensus 231 ~ 231 (257)
+
T Consensus 163 v 163 (622)
T KOG0506|consen 163 V 163 (622)
T ss_pred H
Confidence 3
No 335
>KOG2557 consensus Uncharacterized conserved protein, contains TLDc domain [Function unknown]
Probab=22.85 E-value=5.2e+02 Score=23.02 Aligned_cols=102 Identities=15% Similarity=0.296 Sum_probs=63.6
Q ss_pred CCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhc-CCCCH-HHH-HHHHHHHH---
Q 025118 131 NGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESE-IKLPD-DLL-EAIIDKTF--- 204 (257)
Q Consensus 131 ~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g-~~~s~-~~~-~~~~~~~f--- 204 (257)
+..++++.+........ .+..++..+.++...|.+++|.....++.+.+..+.+..- ...+. ++. ....+..|
T Consensus 72 ~~~~~l~k~~~~~~~~~-~gt~dq~a~mL~~~~~~sgn~~~~~~q~eQ~~~~vlks~~~~ess~~es~~~~~~d~af~~~ 150 (427)
T KOG2557|consen 72 DDKMTLEKLVIAKATYE-KGTDDQIAEMLYQTLDVNGNGVLSRSQLEQFLVVVLKSVFSTESSDAESSDYKKMDDAFLNA 150 (427)
T ss_pred CccchHHHHhhHHhhhc-cCcccHHHHHHHHHHhhccccccchhHHHHHHHHHhhheeeecccchhhhhhhhhhccccch
Confidence 34688888877766655 6677788999999999999999999999998876543221 11121 111 11111111
Q ss_pred ---HHcCCCCCCcccHHHHHHHHHhChHHHHh
Q 025118 205 ---ADADIDKDGRINKEEWKEFAVRNPSLLKN 233 (257)
Q Consensus 205 ---~~~d~~~dg~I~~~eF~~~l~~~~~~~~~ 233 (257)
.+=+.+--+.-.++.|+.+...-|-+.++
T Consensus 151 ~~~~ke~e~t~p~~~le~~~s~~p~f~~i~r~ 182 (427)
T KOG2557|consen 151 ATFSKEDEGTEPGMSLEDFRSWCPFFPTIRKF 182 (427)
T ss_pred hhhccccccCCCchhHHHHhhhchHHHHHHHH
Confidence 11122223457788888887766665553
No 336
>KOG4070 consensus Putative signal transduction protein p25 [General function prediction only; Signal transduction mechanisms]
Probab=22.52 E-value=2.8e+02 Score=21.19 Aligned_cols=84 Identities=21% Similarity=0.200 Sum_probs=47.5
Q ss_pred HHHHHHHHHhhhcccccCC-CCCHHHHHHHHhcCCCCC-----hHHHHHHHHHHcCCCCCcccHHHHHHHHHhhC----C
Q 025118 79 LEALSELYKNLSCSIIKDG-LIHKEELQVALFQAPYGE-----NLFLDRVFDLFDEKKNGVIDFEEFVHALNVFH----P 148 (257)
Q Consensus 79 i~~l~~~F~~~d~~~~~~G-~i~~~ef~~~l~~~~~~~-----~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~----~ 148 (257)
++.-++.|..+-. ...+| .++-..+...+....... .......|..+-...-+.++|++|..++..+. .
T Consensus 14 ~~~~f~~Fa~fGd-~~asg~em~gkn~~KlcKdc~V~DgK~vT~tdt~i~fsKvkg~~~~~~tf~~fkkal~ela~~R~k 92 (180)
T KOG4070|consen 14 LEESFRAFAKFGD-SKASGTEMNGKNWDKLCKDCKVIDGKSVTGTDTDIVFSKVKGKKARTITFEEFKKALEELATKRFK 92 (180)
T ss_pred HHHHHHHHHHcCC-ccccccccccccHHHHHhhcCcccCCcccccccceeeeeccccccccccHHHHHHHHHHHHHhhhc
Confidence 4444555555421 01233 345555655555433221 23456677777666677899999988877663 2
Q ss_pred CCChHHHHHHHHHhh
Q 025118 149 YAPIEDKIDFAFRLY 163 (257)
Q Consensus 149 ~~~~~~~~~~~F~~~ 163 (257)
..+.++.+..+.+++
T Consensus 93 ~Ks~ee~l~~I~~ll 107 (180)
T KOG4070|consen 93 GKSKEEALDAICQLL 107 (180)
T ss_pred CCCHHHHHHHHHHHH
Confidence 345555666655555
No 337
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=22.33 E-value=2.1e+02 Score=21.12 Aligned_cols=44 Identities=16% Similarity=0.240 Sum_probs=27.5
Q ss_pred CcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHcCCCCCCcccH
Q 025118 169 GYIEREEVKQMVAAILMESEIKLPDDLLEAIIDKTFADADIDKDGRINK 217 (257)
Q Consensus 169 G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~~~f~~~d~~~dg~I~~ 217 (257)
+.++.+|=..+| +....++.+++.+-.+.+|..-|+++.|..-.
T Consensus 53 ~~Mtl~EA~~IL-----nv~~~~~~eeI~k~y~~Lf~~Nd~~kGGSfYL 96 (127)
T PF03656_consen 53 KGMTLDEARQIL-----NVKEELSREEIQKRYKHLFKANDPSKGGSFYL 96 (127)
T ss_dssp ----HHHHHHHH-----T--G--SHHHHHHHHHHHHHHT-CCCTS-HHH
T ss_pred CCCCHHHHHHHc-----CCCCccCHHHHHHHHHHHHhccCCCcCCCHHH
Confidence 358999988887 23446788888888899999999987776443
No 338
>KOG1785 consensus Tyrosine kinase negative regulator CBL [Defense mechanisms]
Probab=22.29 E-value=3.3e+02 Score=24.39 Aligned_cols=87 Identities=17% Similarity=0.258 Sum_probs=55.0
Q ss_pred CCCCCHHHHHHHHhcC-CCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCC---cc
Q 025118 96 DGLIHKEELQVALFQA-PYGENLFLDRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTG---YI 171 (257)
Q Consensus 96 ~G~i~~~ef~~~l~~~-~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G---~I 171 (257)
...+.+..|..+|... +.....++-.+-..+|...++.|+--||=.....+.+. ..+-.-++.+-.-+-| ++
T Consensus 188 k~ivPW~~F~q~L~~~Hpi~~gleAmaLktTIDLtcnd~iS~FEFDvFTRLFqPw----~tllkNWq~LavtHPGYmAFL 263 (563)
T KOG1785|consen 188 KTIVPWKTFRQALHKVHPISSGLEAMALKTTIDLTCNDFISNFEFDVFTRLFQPW----KTLLKNWQTLAVTHPGYMAFL 263 (563)
T ss_pred cccccHHHHHHHHHhcCCCcchhHHHHhhceeccccccceeeehhhhHHHhhccH----HHHHHhhhhhhccCCceeEEe
Confidence 3356677777777652 33333455666677888888888877765544433211 2333456677777777 57
Q ss_pred cHHHHHHHHHHHHHh
Q 025118 172 EREEVKQMVAAILME 186 (257)
Q Consensus 172 ~~~e~~~~l~~~~~~ 186 (257)
+.+|++.-+++....
T Consensus 264 TYDEVk~RLqk~~~K 278 (563)
T KOG1785|consen 264 TYDEVKARLQKYIKK 278 (563)
T ss_pred eHHHHHHHHHHHhcC
Confidence 889999888776433
No 339
>PF08100 Dimerisation: Dimerisation domain; InterPro: IPR012967 This domain is found at the N terminus of a variety of plant O-methyltransferases. It has been shown to mediate dimerisation of these proteins [].; GO: 0008168 methyltransferase activity, 0046983 protein dimerization activity; PDB: 1ZGJ_A 1ZG3_A 1ZHF_A 1ZGA_A 2QYO_A 1KYW_A 1KYZ_A 3REO_D 1FPX_A 1FP2_A ....
Probab=22.26 E-value=91 Score=18.90 Aligned_cols=39 Identities=18% Similarity=0.232 Sum_probs=20.4
Q ss_pred HHHhhhcccccCCCCCHHHHHHHHhcCCCCChHHHHHHHHH
Q 025118 85 LYKNLSCSIIKDGLIHKEELQVALFQAPYGENLFLDRVFDL 125 (257)
Q Consensus 85 ~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~lf~~ 125 (257)
.|+.+... ++|.+|..|+...+...+......++++++.
T Consensus 11 I~dii~~~--g~~~ls~~eia~~l~~~~p~~~~~L~RimR~ 49 (51)
T PF08100_consen 11 IPDIIHNA--GGGPLSLSEIAARLPTSNPSAPPMLDRIMRL 49 (51)
T ss_dssp HHHHHHHH--TTS-BEHHHHHHTSTCT-TTHHHHHHHHHHH
T ss_pred cHHHHHHc--CCCCCCHHHHHHHcCCCCcchHHHHHHHHHH
Confidence 35555443 5578888888776552112223356666654
No 340
>KOG2301 consensus Voltage-gated Ca2+ channels, alpha1 subunits [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=22.00 E-value=53 Score=34.85 Aligned_cols=72 Identities=11% Similarity=0.011 Sum_probs=52.3
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHhcCCCC----ChHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 025118 73 RFSVNELEALSELYKNLSCSIIKDGLIHKEELQVALFQAPYG----ENLFLDRVFDLFDEKKNGVIDFEEFVHALNVF 146 (257)
Q Consensus 73 ~~~~~ei~~l~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~----~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 146 (257)
.++..+++..++++..+|++ ..|+|...++...++.+..+ .....+.+-..+-...+|.|+|..-+-++..-
T Consensus 1410 ~Ls~~d~~~F~~vW~~fDpe--atg~I~~~~~~~~lr~L~ppL~~~k~~~~kli~mdmp~~~gd~V~f~d~L~aL~~r 1485 (1592)
T KOG2301|consen 1410 GLSEDDFEKFYEAWDEFDPE--ATQEIPYSDLSAFLRSLDPPLDLGKPNKRKLISMDLPMVSGDRVHCLDILFALTKR 1485 (1592)
T ss_pred cCCcccHHHHHHHHHhcChh--hheeeeHhhHHHHHHhcCCccccCCCCCceeeeeecCcCCCCeeehhhHHHHHHHH
Confidence 47788899999999999999 99999999999887764321 11111334444555678899999888777543
No 341
>COG5562 Phage envelope protein [General function prediction only]
Probab=21.95 E-value=78 Score=23.58 Aligned_cols=28 Identities=25% Similarity=0.330 Sum_probs=22.1
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 025118 119 LDRVFDLFDEKKNGVIDFEEFVHALNVF 146 (257)
Q Consensus 119 ~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 146 (257)
-..+-..+..+..|..+|+||+..+..-
T Consensus 74 ~~~i~~al~~~qsGqttF~ef~~~la~A 101 (137)
T COG5562 74 TTLIKTALRRHQSGQTTFEEFCSALAEA 101 (137)
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHHHhC
Confidence 4556677778889999999999887653
No 342
>KOG3449 consensus 60S acidic ribosomal protein P2 [Translation, ribosomal structure and biogenesis]
Probab=21.72 E-value=3.1e+02 Score=19.65 Aligned_cols=41 Identities=12% Similarity=0.196 Sum_probs=32.1
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHH
Q 025118 156 IDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAII 200 (257)
Q Consensus 156 ~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~ 200 (257)
...+|-+++..++...+..+++.++ ...|....++-++.++
T Consensus 3 yvaAYLL~~lgGn~~psa~DikkIl----~sVG~E~d~e~i~~vi 43 (112)
T KOG3449|consen 3 YVAAYLLAVLGGNASPSASDIKKIL----ESVGAEIDDERINLVL 43 (112)
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHH----HHhCcccCHHHHHHHH
Confidence 3456777788888889999999998 5568888888766666
No 343
>PLN02508 magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase
Probab=21.68 E-value=3.2e+02 Score=23.82 Aligned_cols=120 Identities=17% Similarity=0.242 Sum_probs=68.8
Q ss_pred HHHHHHHHHH--cCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHH
Q 025118 117 LFLDRVFDLF--DEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDD 194 (257)
Q Consensus 117 ~~~~~lf~~~--d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~ 194 (257)
.+++.+...+ |.|+.-.+-=+||...+..+. .....+-+..+-+.+-..=+|.+-..|+.+=++ + .+.
T Consensus 41 ~e~~A~l~Efr~DyNr~HF~R~~eF~~~~~~l~-~~~r~~FidFLerSctaEFSGflLYKEl~rrlk----~-----~nP 110 (357)
T PLN02508 41 AEFEALLQEFKTDYNQTHFVRNEEFKAAADKIQ-GPLRQIFIEFLERSCTAEFSGFLLYKELGRRLK----K-----TNP 110 (357)
T ss_pred HHHHHHHHHHHhCccccccccChhhccchhhCC-HHHHHHHHHHHHhhhhhhcccchHHHHHHHhcc----c-----CCh
Confidence 3566666665 334444455566665554432 222233344444555666677777777766541 1 112
Q ss_pred HHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhChHHHHhcCCCCcccccccc-Ccceeec
Q 025118 195 LLEAIIDKTFADADIDKDGRINKEEWKEFAVRNPSLLKNMTLPYLTDITTIF-PSFVFNT 253 (257)
Q Consensus 195 ~~~~~~~~~f~~~d~~~dg~I~~~eF~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 253 (257)
.+.++|..+..|..- ...|++--..+-++.--||..+.+.-+..| |.||+-+
T Consensus 111 ----~lae~F~lMaRDEAR---HAGFlNkam~Df~l~lDLgfLtk~rkYTfF~PkfIfYA 163 (357)
T PLN02508 111 ----VVAEIFTLMSRDEAR---HAGFLNKALSDFNLALDLGFLTKNRKYTFFKPKFIFYA 163 (357)
T ss_pred ----HHHHHHHHhCchhHH---HHhHHHHHHHHcCccccchhhcccCceeeeCcceeehh
Confidence 255566666655322 245666666666666677777777788888 8898743
No 344
>PF06648 DUF1160: Protein of unknown function (DUF1160); InterPro: IPR010594 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf75; it is a family of uncharacterised viral proteins.
Probab=21.65 E-value=3.3e+02 Score=19.95 Aligned_cols=44 Identities=16% Similarity=0.278 Sum_probs=23.6
Q ss_pred ChHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHH
Q 025118 151 PIEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAII 200 (257)
Q Consensus 151 ~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~ 200 (257)
...+++..+|++|- ++.|+.+.+..++.+ .-|..+|..+++-+.
T Consensus 34 tf~~Kl~~Il~mFl---~~eid~e~~y~l~~~---~d~~~LT~~Qi~Yl~ 77 (122)
T PF06648_consen 34 TFLDKLIKILKMFL---NDEIDVEDMYNLFGA---VDGLKLTRSQIDYLY 77 (122)
T ss_pred hHHHHHHHHHHHHH---hCCCCHHHHHHHHhc---ccHhhcCHHHHHHHH
Confidence 34455666666664 355666666666632 113456665554444
No 345
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=21.44 E-value=33 Score=23.80 Aligned_cols=16 Identities=19% Similarity=0.370 Sum_probs=10.5
Q ss_pred CccccccccCcceeec
Q 025118 238 YLTDITTIFPSFVFNT 253 (257)
Q Consensus 238 ~~~~~~~~~~~~~~~~ 253 (257)
...-.-.+||||+.|.
T Consensus 70 p~~G~lvlFPs~l~H~ 85 (101)
T PF13759_consen 70 PEEGDLVLFPSWLWHG 85 (101)
T ss_dssp --TTEEEEEETTSEEE
T ss_pred CCCCEEEEeCCCCEEe
Confidence 3333556789999996
No 346
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=21.22 E-value=28 Score=27.58 Aligned_cols=46 Identities=20% Similarity=0.341 Sum_probs=32.0
Q ss_pred hHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHhhcCCCCHHHHHHHHH
Q 025118 152 IEDKIDFAFRLYDLRQTGYIEREEVKQMVAAILMESEIKLPDDLLEAIID 201 (257)
Q Consensus 152 ~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~~~~~g~~~s~~~~~~~~~ 201 (257)
..+..+.+|.-||.+.=-..+.+++.+++ ...+.--...-++.++.
T Consensus 52 Kre~fr~aF~~Fd~~~VA~~~e~die~Ll----~d~~IIRnr~KI~Avi~ 97 (187)
T PRK10353 52 KRENYRACFHQFDPVKVAAMQEEDVERLV----QDAGIIRHRGKIQAIIG 97 (187)
T ss_pred HHHHHHHHHcCCCHHHHhCCCHHHHHHHh----cCchhHHhHHHHHHHHH
Confidence 44678999999999887788899999887 34443333444555554
No 347
>PF11569 Homez: Homeodomain leucine-zipper encoding, Homez; PDB: 2YS9_A.
Probab=20.80 E-value=1.3e+02 Score=18.70 Aligned_cols=29 Identities=21% Similarity=0.296 Sum_probs=18.5
Q ss_pred cCCCCChHhHHHHHHhCCCCHHHHHHHHH
Q 025118 56 QKCRFDVGDLARLAAESRFSVNELEALSE 84 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~ei~~l~~ 84 (257)
....+....+..+...+.++.++|+.+|.
T Consensus 19 ~h~~L~E~DL~~L~~kS~ms~qqVr~WFa 47 (56)
T PF11569_consen 19 KHKQLQEEDLDELCDKSRMSYQQVRDWFA 47 (56)
T ss_dssp HT----TTHHHHHHHHTT--HHHHHHHHH
T ss_pred HcCCccHhhHHHHHHHHCCCHHHHHHHHH
Confidence 34567777888888889999999888765
No 348
>CHL00185 ycf59 magnesium-protoporphyrin IX monomethyl ester cyclase; Provisional
Probab=20.63 E-value=2.5e+02 Score=24.44 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=18.1
Q ss_pred HHHHHHHhChHHHHhcCCCCcccccccc-Ccceee
Q 025118 219 EWKEFAVRNPSLLKNMTLPYLTDITTIF-PSFVFN 252 (257)
Q Consensus 219 eF~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 252 (257)
.|++-...+-++.--||..+.+.-+..| |.||+-
T Consensus 128 GFlNkam~df~l~lDLgfLtk~rkYTfF~PkfI~Y 162 (351)
T CHL00185 128 GFLNKAMSDFNLSLDLGFLTKSRKYTFFSPKFIFY 162 (351)
T ss_pred hhHHHHHHHcCccccchhhccCCceeeecccceeh
Confidence 3444444444444455555555556666 666653
No 349
>smart00389 HOX Homeodomain. DNA-binding factors that are involved in the transcriptional regulation of key developmental processes
Probab=20.10 E-value=2e+02 Score=16.89 Aligned_cols=26 Identities=15% Similarity=0.073 Sum_probs=21.9
Q ss_pred CCChHhHHHHHHhCCCCHHHHHHHHH
Q 025118 59 RFDVGDLARLAAESRFSVNELEALSE 84 (257)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~ei~~l~~ 84 (257)
..+..+...++..+.++..+|..++.
T Consensus 24 ~P~~~~~~~la~~~~l~~~qV~~WF~ 49 (56)
T smart00389 24 YPSREEREELAAKLGLSERQVKVWFQ 49 (56)
T ss_pred CCCHHHHHHHHHHHCcCHHHHHHhHH
Confidence 67888899999999999888887764
No 350
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=20.08 E-value=4.4e+02 Score=24.35 Aligned_cols=95 Identities=17% Similarity=0.324 Sum_probs=50.7
Q ss_pred HHHHHHHcCCCCCcccHHHHHHHHHhhCCCCChHHHHHHHHHh---hCC-----CCCCcccHHHHHHHHHHHH----Hh-
Q 025118 120 DRVFDLFDEKKNGVIDFEEFVHALNVFHPYAPIEDKIDFAFRL---YDL-----RQTGYIEREEVKQMVAAIL----ME- 186 (257)
Q Consensus 120 ~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~---~D~-----d~~G~I~~~e~~~~l~~~~----~~- 186 (257)
+.||..+-.-..+.+.+..|+.++.... ....+-+++.++.. +|+ ..-+.++.+-|++.+.... +.
T Consensus 89 DLLFyLiaegq~ekipihKFiTALkstG-LrtsDPRLk~mMd~mKd~dq~~~e~S~gw~LdKDlFKkcI~sSI~lvSqAL 167 (622)
T KOG0506|consen 89 DLLFYLIAEGQSEKIPIHKFITALKSTG-LRTSDPRLKDMMDEMKDVDQEENESSSGWLLDKDLFKKCIFSSIVLVSQAL 167 (622)
T ss_pred hhhhHHhhcCCcCcccHHHHHHHHHHcC-CCcCCchHHHHHHHHHHHHhhhcccccceeecHHHHHHhhccchhHHHHHH
Confidence 4466666554567788888888777665 33333344444433 332 1235788888888764321 00
Q ss_pred -hcCCCCH-HHHHHHHHHHHHHcCCCCCCcc
Q 025118 187 -SEIKLPD-DLLEAIIDKTFADADIDKDGRI 215 (257)
Q Consensus 187 -~g~~~s~-~~~~~~~~~~f~~~d~~~dg~I 215 (257)
-+.-+++ .++-..+..+|+.+-.-..|.+
T Consensus 168 rkqmVIPdw~~Fts~I~tIFEscke~seG~v 198 (622)
T KOG0506|consen 168 RKQMVIPDWEEFTSHIDTIFESCKESSEGKV 198 (622)
T ss_pred hcCccCCcHHHHHHHHHHHHHHHHhcCCccH
Confidence 1112222 3344456667776655555543
Done!