BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025120
(257 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55909|Y305_SYNY3 TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1
Length = 209
Score = 121 bits (303), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 110/181 (60%), Gaps = 3/181 (1%)
Query: 34 LKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATI 93
L + L W+D LG W + + Y T++ +P S+LTLG G +FG+ +G + IGAT+
Sbjct: 5 LLNALQWID-GLGTWAAIAFMLLYTVATVVFLPGSILTLGAGVVFGVILGSIYVFIGATL 63
Query: 94 GAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLL 153
GA AAFL+GR + + +V K+ +F+++ A+ + G KIV+L RL P+ PFN+LNY
Sbjct: 64 GATAAFLVGRYLARGWVAKKIAGNQKFKAIDEAVGKEGLKIVILTRLSPVFPFNLLNYAY 123
Query: 154 SVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKT-RWAFLIFGLVV 212
+T V L +Y++ S +GM+P T+ VY+G+ L+ + N+ + T +W I G +
Sbjct: 124 GITNVSLKDYVIGS-LGMIPGTIMYVYIGSLAGSLATLGTATNQANPTLQWTIRIVGFIA 182
Query: 213 S 213
+
Sbjct: 183 T 183
>sp|Q3U145|TMM64_MOUSE Transmembrane protein 64 OS=Mus musculus GN=Tmem64 PE=2 SV=1
Length = 381
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 10/187 (5%)
Query: 10 RITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPAS- 68
R +L+ ++AA+ A L V + L+ L WV+ G L+ V +I +++ P
Sbjct: 122 RSLVLVCVLAALCFASLAL-VRRYLQHLLLWVESLDSLLGVLLFVVGFI---VVSFPCGW 177
Query: 69 ---VLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVAL 125
VL + GYL+G +G +G IG A ++ + + +V +++++ + +V
Sbjct: 178 GYIVLNVAAGYLYGFVLGMGLMVVGVLIGTFIAHVVCKRLLTAWVAARIQNSDKLSAVIR 237
Query: 126 AIQR-SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTT 184
++ SG K+V L RL P+ PF + N + S+T VPL Y++AS G++P L Y+GTT
Sbjct: 238 VVEGGSGLKVVALARLTPI-PFGLQNAVFSITDVPLPSYLMASSAGLLPTQLLNSYLGTT 296
Query: 185 LKDLSDV 191
L+ + DV
Sbjct: 297 LRTMEDV 303
>sp|Q6YI46|TMM64_HUMAN Transmembrane protein 64 OS=Homo sapiens GN=TMEM64 PE=1 SV=2
Length = 380
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 10/187 (5%)
Query: 10 RITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPAS- 68
R +L+ ++AA+ A L V + L L WV+ G L+ V +I +++ P
Sbjct: 121 RSLVLVCVLAALCFASLAL-VRRYLHHLLLWVESLDSLLGVLLFVVGFI---VVSFPCGW 176
Query: 69 ---VLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVAL 125
VL + GYL+G +G +G IG A ++ + + +V ++++ + +V
Sbjct: 177 GYIVLNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIR 236
Query: 126 AIQR-SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTT 184
++ SG K+V L RL P+ PF + N + S+T + L Y++AS +G++P L Y+GTT
Sbjct: 237 VVEGGSGLKVVALARLTPI-PFGLQNAVFSITDLSLPNYLMASSVGLLPTQLLNSYLGTT 295
Query: 185 LKDLSDV 191
L+ + DV
Sbjct: 296 LRTMEDV 302
>sp|P76219|YDJX_ECOLI TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli
(strain K12) GN=ydjX PE=3 SV=2
Length = 236
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 16 LLVAAVVTACFTLPVEKILKDF--LTWVDQDLGPWGPLVLAVAYIPLTILAVPASVLTLG 73
L+ A V+ A + +L D L + + G +G + + +I T+L +P S+L +
Sbjct: 12 LIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSGFFGYSLYILLFIIATLLLLPGSILVIA 71
Query: 74 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 133
GG +FG +G + I AT+ + +FLL R +G+ ++ + F+++ I R+G
Sbjct: 72 GGIVFGPLLGTLLSLIAATLASSCSFLLARWLGRDLLLKYVGHSNTFQAIEKGIARNGID 131
Query: 134 IVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 173
++L RL+PL P+N+ NY +T + Y L S + +P
Sbjct: 132 FLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLISALTTLP 171
>sp|P67118|Y1528_MYCBO TVP38/TMEM64 family membrane protein Mb1528c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb1528c PE=3 SV=1
Length = 252
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 43 QDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLG 102
+ LG W PL + + +T+ P + TL G LFG VG +G+T A A LL
Sbjct: 62 KSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLV 121
Query: 103 RTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLE 162
R G + ++ L + ++ G+ +L LRL+P++PF +NY + V +L
Sbjct: 122 RATG--WQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILS 179
Query: 163 YMLASWIGMMPITLALVYVG 182
+ A+ G++P T A+V +G
Sbjct: 180 FAWATLAGLLPGTAAVVILG 199
>sp|P67117|Y1491_MYCTU TVP38/TMEM64 family membrane protein Rv1491c/MT1538
OS=Mycobacterium tuberculosis GN=Rv1491c PE=3 SV=1
Length = 252
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 43 QDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLG 102
+ LG W PL + + +T+ P + TL G LFG VG +G+T A A LL
Sbjct: 62 KSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLV 121
Query: 103 RTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLE 162
R G + ++ L + ++ G+ +L LRL+P++PF +NY + V +L
Sbjct: 122 RATG--WQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILS 179
Query: 163 YMLASWIGMMPITLALVYVG 182
+ A+ G++P T A+V +G
Sbjct: 180 FAWATLAGLLPGTAAVVILG 199
>sp|Q8L586|Y4958_ARATH Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana
GN=At4g09580 PE=1 SV=1
Length = 287
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 18/209 (8%)
Query: 5 WGSALRITLLILLVAAVVTACFTLP--------VEKILKDFLTWVDQDLGPWGP------ 50
W A+ T+ ++ + T+P V + + D L + ++LG +
Sbjct: 53 WEFAVFFTVFLVFTTGLFCIYLTMPAAEYGKLKVPRTISD-LRLLKENLGSYASEYQARF 111
Query: 51 -LVLAVAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKP 108
L YI + +P ++ ++L G LFG+ GFV + AT GA + F L + +G+P
Sbjct: 112 ILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFFLSKLVGRP 171
Query: 109 FVISKLKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLAS 167
V + +F +A +R +L LR+ P LP +N + +P + LA+
Sbjct: 172 LVNWLWPEKLRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIPFHVFFLAT 231
Query: 168 WIGMMPITLALVYVGTTLKDLSDVTHGWN 196
+G+MP + V G L DL V ++
Sbjct: 232 LVGLMPASYITVRAGLALGDLRSVKDLYD 260
>sp|O62126|TM41_CAEEL Transmembrane protein 41 homolog OS=Caenorhabditis elegans
GN=tag-175 PE=3 SV=1
Length = 246
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Query: 55 VAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK 113
V Y+ L A+P S+ LT+ GYLF V V + GA + + + G+ FV+ K
Sbjct: 76 VVYVFLQSFAIPGSIFLTILSGYLFPFYVAIVLVCSCSATGAAICYTISKLFGRSFVLQK 135
Query: 114 LKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMM 172
+ L+ R F ++ LR+ P++P ++N V VPL + +++G+
Sbjct: 136 FPERIAKWQDDLSKHRDDFLNYMIFLRVTPIVPNWLINIASPVLDVPLAPFFWGTFLGVA 195
Query: 173 PITLALVYVGTTLKDLSDVTHGWN 196
P + + G+TL+ LS + W+
Sbjct: 196 PPSFLYIQAGSTLEQLSHTSVAWS 219
>sp|A1A5V7|TM41B_DANRE Transmembrane protein 41B OS=Danio rerio GN=tmem41b PE=2 SV=1
Length = 282
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 57 YIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK 115
YI L A+P S+ L++ GYL+ P+ + + +GA ++L +G+P V L
Sbjct: 112 YIFLQTFAIPGSIFLSILSGYLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPMVYKYLT 171
Query: 116 DYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPI 174
+ Q S + R ++ LR+ P LP +N V VPL + L +++G+ P
Sbjct: 172 ERAQKWSQQVDKHREHLINYIIFLRITPFLPNWFINITSPVINVPLGVFFLGTFLGVAPP 231
Query: 175 TLALVYVGTTLKDLSDVTHG--WN 196
+ + GTTL L+ WN
Sbjct: 232 SFVAINAGTTLYKLTTAGEAVSWN 255
>sp|Q8MXN7|TM41_DICDI Transmembrane protein 41 homolog OS=Dictyostelium discoideum
GN=DDB_G0275543 PE=3 SV=2
Length = 334
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 2/161 (1%)
Query: 32 KILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIG 90
K+L D L+ D V Y L ++P SV L+ G LFGL VGF
Sbjct: 141 KLLSDILSQYTDDNYFIVITTFGVIYTFLQAFSIPGSVFLSFLSGGLFGLKVGFPLVCFV 200
Query: 91 ATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNML 149
AT+GA ++L+ IG+ V D + S +L+ +R ++ LR+ P LP +
Sbjct: 201 ATLGATFSYLISYYIGRNLVRKLFPDKLKLFSDSLSQKRDNLLNYIVFLRITPFLPNWFI 260
Query: 150 NYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSD 190
N + VP+ + + ++IG+MP T V G ++++ +
Sbjct: 261 NLASPLLDVPIHTFAIGTFIGIMPATFLAVKAGIQIQNIQN 301
>sp|A4II98|TM41B_XENTR Transmembrane protein 41B OS=Xenopus tropicalis GN=tmem41b PE=2
SV=1
Length = 278
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 57 YIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK 115
YI L A+P S+ L++ G+L+ P+ + + +GA ++LL +G+P V L
Sbjct: 108 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFSYLLSYLVGRPVVYKYLS 167
Query: 116 DYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPI 174
D S + R ++ LR+ P LP +N V VPL + L ++IG+ P
Sbjct: 168 DKAIKWSQQVERHRDHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFLGTFIGVAPP 227
Query: 175 TLALVYVGTTLKDLSDVTHG--WNE 197
+ + GTTL L+ WN
Sbjct: 228 SFVAIKAGTTLYQLTTAGEAVSWNS 252
>sp|Q5U4K5|TM41B_XENLA Transmembrane protein 41B OS=Xenopus laevis GN=tmem41b PE=2 SV=1
Length = 278
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 57 YIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK 115
YI L A+P S+ L++ G+L+ P+ + + +GA +LL +G+P V L
Sbjct: 108 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYLLSYLVGRPVVYKYLS 167
Query: 116 DYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPI 174
D S + R ++ LR+ P LP +N V VPL + L ++IG+ P
Sbjct: 168 DKAIKWSQQVERHRDHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFLGTFIGVAPP 227
Query: 175 TLALVYVGTTLKDLSDVTHG--WNE 197
+ + GTTL L+ WN
Sbjct: 228 SFVAIKAGTTLYQLTTAGEAVSWNS 252
>sp|Q0CT01|TVP38_ASPTN Golgi apparatus membrane protein tvp38 OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=tvp38 PE=3 SV=1
Length = 418
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 80/147 (54%), Gaps = 7/147 (4%)
Query: 49 GPLVLAVAYIPLTILAVPA----SVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRT 104
PLV V ++ + ++ P S GY+FG+ G++ + +G+ A+F++ RT
Sbjct: 120 NPLVFFVLWLCVFFVSFPPLVGWSTFGTVAGYIFGVWKGWLLYASATVLGSTASFIVSRT 179
Query: 105 IGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTP-VPLLEY 163
I FV ++ +F ++AL ++ G K++ ++RL P LP+++ N +S P V L Y
Sbjct: 180 ILSKFVHRLMERDKRFAALALTLKYDGLKLLCMIRLCP-LPYSVCNGAVSTFPTVHPLTY 238
Query: 164 MLASWIGMMPITLALVYVGTTLKDLSD 190
LA+ I + P L ++G L+ LS+
Sbjct: 239 GLATAI-ITPKLLVPAFIGNRLRVLSE 264
>sp|P76221|YDJZ_ECOLI TVP38/TMEM64 family inner membrane protein YdjZ OS=Escherichia coli
(strain K12) GN=ydjZ PE=1 SV=1
Length = 235
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 10 RITLLILLVAAVVTACFTLPVEKILKD---FLTWVDQD-----LGPWGPLVLAVAYIPLT 61
RITL+ILL A ++ V + + VDQ + +G L V+++ +
Sbjct: 13 RITLIILLFAMLLAWALLPGVHEFINRSVAAFAAVDQQGIERFIQSYGALAAVVSFLLMI 72
Query: 62 ILAV----PASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDY 117
+ A+ PA ++T LFG G + + GA F + R +G+ V+ KL
Sbjct: 73 LQAIAAPLPAFLITFANASLFGAFWGGLLSWTSSMAGAALCFFIARVMGRE-VVEKLTGK 131
Query: 118 PQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLA 177
S+ R G +L+ RL+P +PF+ ++Y +T + + +A+ +G +P T+
Sbjct: 132 TVLDSMDGFFTRYGKHTILVCRLLPFVPFDPISYAAGLTSIRFRSFFIATGLGQLPATIV 191
Query: 178 LVYVGTTL 185
+ G+ L
Sbjct: 192 YSWAGSML 199
>sp|Q5FVN2|TM41B_RAT Transmembrane protein 41B OS=Rattus norvegicus GN=Tmem41b PE=2 SV=1
Length = 291
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 57 YIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK 115
YI L A+P S+ L++ G+L+ P+ + + +GA ++L +G+P V L
Sbjct: 121 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 180
Query: 116 DYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPI 174
+ S + R ++ LR+ P LP +N V VPL + + +++G+ P
Sbjct: 181 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP 240
Query: 175 TLALVYVGTTLKDLSDVTHG--WNE 197
+ + GTTL L+ WN
Sbjct: 241 SFVAIKAGTTLYQLTTAGEAVSWNS 265
>sp|Q5BJD5|TM41B_HUMAN Transmembrane protein 41B OS=Homo sapiens GN=TMEM41B PE=1 SV=1
Length = 291
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 57 YIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK 115
YI L A+P S+ L++ G+L+ P+ + + +GA ++L +G+P V L
Sbjct: 121 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 180
Query: 116 DYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPI 174
+ S + R ++ LR+ P LP +N V VPL + + +++G+ P
Sbjct: 181 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP 240
Query: 175 TLALVYVGTTLKDLSDVTHG--WNE 197
+ + GTTL L+ WN
Sbjct: 241 SFVAIKAGTTLYQLTTAGEAVSWNS 265
>sp|Q8K1A5|TM41B_MOUSE Transmembrane protein 41B OS=Mus musculus GN=Tmem41b PE=2 SV=1
Length = 291
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 57 YIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK 115
YI L A+P S+ L++ G+L+ P+ + + +GA ++L +G+P V L
Sbjct: 121 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 180
Query: 116 DYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPI 174
+ S + R ++ LR+ P LP +N V VPL + + +++G+ P
Sbjct: 181 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP 240
Query: 175 TLALVYVGTTLKDLS 189
+ + GTTL L+
Sbjct: 241 SFVAIKAGTTLHQLT 255
>sp|Q2UUJ9|TVP38_ASPOR Golgi apparatus membrane protein tvp38 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=tvp38 PE=3 SV=2
Length = 414
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 75 GYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKI 134
GY+FG+ G+ + +G+ +F++ RTI FV ++ +F ++AL ++ G K+
Sbjct: 147 GYIFGVWKGWFLYASATVLGSTCSFVVSRTILSKFVNRMMERDKRFAALALTLKYDGLKL 206
Query: 135 VLLLRLVPLLPFNMLNYLLSVTP-VPLLEYMLASWIGMMPITLALVYVGTTLKDLSD 190
+ ++RL P LP+++ N +S P V L Y LA+ I + P L +VG+ ++ LS+
Sbjct: 207 LCMIRLCP-LPYSVCNGAVSTFPTVQPLMYGLATAI-VTPKLLVPAFVGSRIRLLSE 261
>sp|A1CW44|TVP38_NEOFI Golgi apparatus membrane protein tvp38 OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=tvp38 PE=3 SV=1
Length = 418
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 74 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 133
G++FG+ G++ + +G+ +F++ RTI FV ++ +F ++AL ++ G K
Sbjct: 148 AGFIFGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTLKYDGLK 207
Query: 134 IVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 191
++ ++RL P LP+++ N +S P PL+ Y LA+ + + P L ++G+ ++ LS+
Sbjct: 208 LLCMIRLCP-LPYSVCNGAVSTFPTVHPLM-YGLATAL-ITPKLLVPAFIGSRIRILSEK 264
Query: 192 THGWNEFSK 200
+ SK
Sbjct: 265 NEEMSAGSK 273
>sp|Q5ZIL6|TM41B_CHICK Transmembrane protein 41B OS=Gallus gallus GN=TMEM41B PE=2 SV=1
Length = 269
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 57 YIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK 115
Y+ L A+P S+ L++ G+L+ P+ + + +GA ++L +G+P V L
Sbjct: 99 YVFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 158
Query: 116 DYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPI 174
+ S + R ++ LR+ P LP +N V VPL + + +++G+ P
Sbjct: 159 EKAVKWSEQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP 218
Query: 175 TLALVYVGTTLKDLSDVTHG--WNE 197
+ + GTTL L+ WN
Sbjct: 219 SFVAIKAGTTLYQLTTAGEAVSWNS 243
>sp|A7EFY0|TVP38_SCLS1 Golgi apparatus membrane protein tvp38 OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=tvp38 PE=3 SV=1
Length = 393
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Query: 67 ASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALA 126
+S +T+ G +++G+P G+ + G+ +FL RTI +V + +F ++AL
Sbjct: 149 SSTITIAG-FVYGVPKGWAIVATSTVAGSTCSFLASRTILSTYVHRLVGKDKRFEALALT 207
Query: 127 IQRSGFKIVLLLRLVPLLPFNMLNYLLSVTP-VPLLEYMLASWIGMMPITLALVYVGTTL 185
++ G KI+ ++RL P LP+++ N ++ P V L Y LA+ + + P V++G+ L
Sbjct: 208 LKHDGIKILCMIRLCP-LPYSLSNAAVATFPTVHPLNYALATAL-VTPKLFIHVFIGSRL 265
Query: 186 KDLS 189
L+
Sbjct: 266 GSLA 269
>sp|A1CIM4|TVP38_ASPCL Golgi apparatus membrane protein tvp38 OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=tvp38 PE=3 SV=1
Length = 419
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 74 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 133
G++FG+ G++ + +G+ +F++ RT+ FV ++ +F ++AL ++ G K
Sbjct: 149 AGFIFGIWKGWLLYATATVLGSTCSFIVSRTVLSKFVNRMMERDKRFAALALTLKYDGLK 208
Query: 134 IVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTLKDLSD 190
++ ++RL P LP+++ N +S P PL+ Y LA+ I + P L ++G+ ++ LS+
Sbjct: 209 LLCMIRLCP-LPYSVCNGAVSTFPTVHPLM-YGLATAI-ITPKLLVPAFIGSRIRILSE 264
>sp|Q4WQJ2|TVP38_ASPFU Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=tvp38 PE=3 SV=1
Length = 418
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 74 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 133
G+++G+ G++ + +G+ +F++ RTI FV ++ +F ++AL ++ G K
Sbjct: 148 SGFIYGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTLKYDGLK 207
Query: 134 IVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 191
++ ++RL P LP+++ N +S P PL+ Y LA+ + + P L ++G+ ++ LS+
Sbjct: 208 LLCMIRLCP-LPYSVCNGAVSTFPTVHPLM-YGLATAL-ITPKLLVPAFIGSRIRILSEK 264
Query: 192 THGWNEFSK 200
+ SK
Sbjct: 265 NEEMSAASK 273
>sp|B0Y4Q5|TVP38_ASPFC Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=tvp38 PE=3
SV=1
Length = 418
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 74 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 133
G+++G+ G++ + +G+ +F++ RTI FV ++ +F ++AL ++ G K
Sbjct: 148 SGFIYGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTLKYDGLK 207
Query: 134 IVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 191
++ ++RL P LP+++ N +S P PL+ Y LA+ + + P L ++G+ ++ LS+
Sbjct: 208 LLCMIRLCP-LPYSVCNGAVSTFPTVHPLM-YGLATAL-ITPKLLVPAFIGSRIRILSEK 264
Query: 192 THGWNEFSK 200
+ SK
Sbjct: 265 NEEMSAASK 273
>sp|O07559|YHJE_BACSU Uncharacterized membrane protein YhjE OS=Bacillus subtilis (strain
168) GN=yhjE PE=4 SV=1
Length = 207
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 35 KDFLTWVDQDLGPWGPLV-----LAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSI 89
++ LT + Q +GPL+ L A++P +P V + FGL GF+
Sbjct: 11 QEHLTELFQSYRAFGPLIAVLLPLIEAFLPF----LPLIVFVVANTNSFGLWEGFILSWA 66
Query: 90 GATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNML 149
G+T G+ FL+ R G+ ++ ++ +P R + L ++R GF + LL P P +
Sbjct: 67 GSTAGSILVFLIVRQYGQRKLLGFIRSHPSVRKLMLWVERHGFGPMFLLLCFPFTPSAAV 126
Query: 150 NYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDL 188
N + ++ + ++LA+ G + + + ++G L L
Sbjct: 127 NVVAGLSRIGTRPFILAAASGKLVMIFMISFIGYDLHAL 165
>sp|Q5RBZ8|TM41B_PONAB Transmembrane protein 41B OS=Pongo abelii GN=TMEM41B PE=2 SV=1
Length = 291
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Query: 57 YIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK 115
YI L A+P S+ L++ G+L+ P+ + + +GA ++L +G+P V L
Sbjct: 121 YIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLT 180
Query: 116 DYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPI 174
+ S + R ++ LR+ P LP +N V VPL + + +++G+ P
Sbjct: 181 EKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPP 240
Query: 175 TLALVYVGTTLKDLSDVTHG--WNE 197
+ + GTTL + WN
Sbjct: 241 SFVAIKAGTTLHQPTTAGEAVSWNS 265
>sp|A2Q9P2|TVP38_ASPNC Golgi apparatus membrane protein tvp38 OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=tvp38 PE=3 SV=2
Length = 415
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 82/157 (52%), Gaps = 9/157 (5%)
Query: 50 PLVLAVAYIPLTILAVPA----SVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTI 105
PL V ++ + ++ P S GY+FG+ G++ + +G+ +F++ RTI
Sbjct: 120 PLAYGVLWLCVFFVSFPPLVGWSTFGTMAGYIFGIWKGWLLYASATVLGSTCSFIVSRTI 179
Query: 106 GKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPV--PLLEY 163
FV ++ +F +++L ++ G K++ ++RL P LP+++ N +S P PL+ Y
Sbjct: 180 LSKFVHRLMERDKRFAALSLTLKYDGLKLLCMIRLCP-LPYSVCNGAVSTFPTVQPLM-Y 237
Query: 164 MLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSK 200
LA+ + + P L ++G L+ LS+ + SK
Sbjct: 238 GLATAL-ISPKLLVPAFIGNRLRVLSENNEEMSAGSK 273
>sp|A6RIB9|TVP38_BOTFB Golgi apparatus membrane protein tvp38 OS=Botryotinia fuckeliana
(strain B05.10) GN=tvp38 PE=3 SV=1
Length = 392
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Query: 67 ASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALA 126
+S +T+ G +++G+P G+ + G+ +FL RTI +V + +F ++AL
Sbjct: 148 SSTITIAG-FVYGVPKGWAIVASATVAGSLCSFLASRTILSSYVHRLVGKDKRFEALALT 206
Query: 127 IQRSGFKIVLLLRLVPLLPFNMLNYLLSVTP-VPLLEYMLASWIGMMPITLALVYVGTTL 185
++ G KI+ ++RL P LP+++ N ++ P V L Y LA+ + + P V++G+ L
Sbjct: 207 LKHDGIKILCMIRLCP-LPYSLSNAAVATFPTVHPLNYALATAL-VTPKLFIHVFIGSRL 264
Query: 186 KDLS 189
L+
Sbjct: 265 GSLA 268
>sp|Q9VX39|TM41_DROME Transmembrane protein 41 homolog OS=Drosophila melanogaster
GN=CG8408 PE=2 SV=2
Length = 320
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 74/147 (50%), Gaps = 8/147 (5%)
Query: 55 VAYIPLTILAVPASV-LTLGGGYLFGLPVGFV----ADSIGATIGAGAAFLLGRTIGKPF 109
VAY+ L A+P S+ L++ G+L+ P+ ++GAT+ + L+GR + + F
Sbjct: 147 VAYVFLQTFAIPGSLFLSILLGFLYKFPIALFLICFCSALGATLCYTLSNLVGRRLIRHF 206
Query: 110 VISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWI 169
K ++ + + S F +L LR+ P+LP +N V VPL + L ++
Sbjct: 207 WPKKTSEWSKHVE---EYRDSLFNYMLFLRMTPILPNWFINLASPVIGVPLHIFALGTFC 263
Query: 170 GMMPITLALVYVGTTLKDLSDVTHGWN 196
G+ P ++ + G TL+ ++ + ++
Sbjct: 264 GVAPPSVIAIQAGKTLQKMTSSSEAFS 290
>sp|P06568|YTXB_BACSU TVP38/TMEM64 family membrane protein YtxB OS=Bacillus subtilis
(strain 168) GN=ytxB PE=3 SV=1
Length = 213
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 35 KDFLTWVDQDLGPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIG 94
K+ WV G + PL+ I ++ P SV+++ GG FG +G + G+
Sbjct: 32 KEIRVWV-LSFGVFAPLMFIGISIVRPLVLFPVSVISIAGGLAFGPLLGTLYTLFGSMCA 90
Query: 95 AGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLS 154
+ +F F K Y + ++ ++ +GF + LLR++P + F+ ++Y
Sbjct: 91 SAVSFFAAGL----FSAKKNGHYERLEAIQKQMEDNGFFYIFLLRILP-INFDFVSYAAG 145
Query: 155 VTPVPLLEYMLASWIGMMPITLALVYVGTTL 185
++ V L Y A+ +G++P T+AL +G +
Sbjct: 146 LSNVKALPYFAATAVGIIPGTIALNVLGASF 176
>sp|Q5B7A1|TVP38_EMENI Golgi apparatus membrane protein tvp38 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=tvp38 PE=3 SV=1
Length = 410
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 75 GYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKI 134
G++FG+ G++ + +G+ +F+ RT+ FV ++ +F ++AL ++ G K+
Sbjct: 149 GFIFGVWKGWLLYASATVLGSICSFIASRTVLSKFVHRLVERDKRFAALALTLKYDGLKL 208
Query: 135 VLLLRLVPLLPFNMLNYLLSVTP-VPLLEYMLASWIGMMPITLALVYVGTTLKDLSD 190
+ ++RL P LP+++ N +S P V L Y LA+ I + P L ++G+ ++ L++
Sbjct: 209 LCMIRLCP-LPYSICNGAISTFPTVQPLMYGLATAI-ISPKLLVPAFIGSRIRILNE 263
>sp|P54449|YQED_BACSU Uncharacterized protein YqeD OS=Bacillus subtilis (strain 168)
GN=yqeD PE=4 SV=1
Length = 208
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 65 VPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVA 124
VP +++ G +FG G G+ +G F L R + + K++ YP +S
Sbjct: 53 VPFALIAALNGAVFGTANGIWITLTGSMLGTILLFFLARYSFRDWARKKVQAYPAIQSYE 112
Query: 125 LAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVG-- 182
+ ++ F VLL RL+P++P ++N + ++ V + AS IG +P + + G
Sbjct: 113 ASFNKNAFTAVLLGRLIPVIPSLVMNVICGLSQVRWHVFFFASLIGKIPNIVVVTIAGAN 172
Query: 183 -TTLKDLSDVTHG 194
T+ K LS +G
Sbjct: 173 FTSNKLLSISIYG 185
>sp|Q6BQJ1|TVP38_DEBHA Golgi apparatus membrane protein TVP38 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=TVP38 PE=3 SV=1
Length = 383
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 51 LVLAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFV 110
LV V + PL + S L++ G ++G G++ + + G+ +FL+ R +
Sbjct: 105 LVFMVGFPPL----LGFSALSMLAGMVYGFVHGWILLACASISGSFCSFLVFRYLLHSRA 160
Query: 111 ISKLKDYPQFRSVALAIQR-SGFKIVLLLRLVPLLPFNMLNYLLSVTP-VPLLEYMLASW 168
+ +FR+ + ++ S I++LLRL PL P+++ N L+ P +P Y LAS
Sbjct: 161 ERLMNSNKKFRAFSEILREDSSLFILVLLRLCPL-PYSLSNGALAAIPELPATTYFLASL 219
Query: 169 IGMMPITLALVYVGTTLKDLSDVTHG 194
I P + ++VG LK+L D T G
Sbjct: 220 I-TSPKLMIHIFVGHKLKELGDDTKG 244
>sp|Q502G2|T41AA_DANRE Transmembrane protein 41A-A OS=Danio rerio GN=tmem41aa PE=2 SV=1
Length = 281
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 12/167 (7%)
Query: 32 KILKDFLTWVDQDLGPWGPLVLAVAYIPLTILAVP-ASVLTLGGGYLFGLPVGFVADSIG 90
K + + L + + + L+ AY+ A+P +S L + G LFG G + +
Sbjct: 69 KEMAELLQFYKTEHTGYVLLLFCSAYLYKQAFAIPGSSFLNILAGALFGTWFGLLLTCVL 128
Query: 91 ATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQR------SGFKIVLLLRLVPLL 144
T+GA FLL + GK ++ D VA+ ++ S F +L LR P+
Sbjct: 129 TTVGATLCFLLSQAFGKHHIVKLFPD-----KVAMLQKKVEENRSSLFFFLLFLRFFPMS 183
Query: 145 PFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 191
P LN + +P+ + +A +IG+MP V G+ L +S +
Sbjct: 184 PNWFLNMTSPILNIPVTLFFMAVFIGLMPYNFICVQTGSMLSQISSL 230
>sp|Q9D8U2|TM41A_MOUSE Transmembrane protein 41A OS=Mus musculus GN=Tmem41a PE=2 SV=1
Length = 264
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
Query: 51 LVLAVAYIPLTILAVP-ASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPF 109
L+ AY+ A+P +S L + G LFG +G + + ++GA +LL GK
Sbjct: 71 LLFCSAYLYKQGFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATGCYLLSSLFGKQL 130
Query: 110 VISKLKDYPQFRSVALAIQR-SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASW 168
VIS D + R S F +L LRL P+ P LN + +P++++ +
Sbjct: 131 VISYFPDKVALLQKKVEENRNSLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFSVL 190
Query: 169 IGMMPITLALVYVGTTLKDLS--DVTHGWN 196
IG++P V G+ L L+ D W
Sbjct: 191 IGLIPYNFICVQTGSILSTLTSLDALFSWE 220
>sp|Q96HV5|TM41A_HUMAN Transmembrane protein 41A OS=Homo sapiens GN=TMEM41A PE=2 SV=1
Length = 264
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 4/154 (2%)
Query: 51 LVLAVAYIPLTILAVP-ASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPF 109
L+ AY+ A+P +S L + G LFG +G + + ++GA +LL GK
Sbjct: 71 LLFCGAYLYKQGFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATCCYLLSSIFGKQL 130
Query: 110 VISKLKDYPQFRSVALAIQR-SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASW 168
V+S D + R S F +L LRL P+ P LN + +P++++ +
Sbjct: 131 VVSYFPDKVALLQRKVEENRNSLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFSVL 190
Query: 169 IGMMPITLALVYVGTTLKDLS--DVTHGWNEFSK 200
IG++P V G+ L L+ D W+ K
Sbjct: 191 IGLIPYNFICVQTGSILSTLTSLDALFSWDTVFK 224
>sp|Q08D99|TM41A_BOVIN Transmembrane protein 41A OS=Bos taurus GN=TMEM41A PE=2 SV=1
Length = 264
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 4/150 (2%)
Query: 51 LVLAVAYIPLTILAVP-ASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPF 109
L+ AY+ A+P +S L + G LFG +G + + ++GA +LL GK
Sbjct: 71 LLFCSAYLYKQSFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATGCYLLSSVFGKQL 130
Query: 110 VISKLKDYPQFRSVALAIQRSGFKIVLLLRL-VPLLPFNMLNYLLSVTPVPLLEYMLASW 168
V+ D + R+G LL P+ P LN + +P++++ +
Sbjct: 131 VVFYFPDKVALLQKKVEENRNGLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFSVL 190
Query: 169 IGMMPITLALVYVGTTLKDLS--DVTHGWN 196
IG++P V G+ L L+ D W
Sbjct: 191 IGLIPYNFICVQTGSILSTLTSLDALFSWE 220
>sp|P67116|Y641_MYCBO TVP38/TMEM64 family membrane protein Mb0641c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb0641c PE=3 SV=1
Length = 246
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 68/146 (46%), Gaps = 5/146 (3%)
Query: 46 GPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVG-FVADSIGATIG-AGAAFLLGR 103
GP PL V L L VP +L G LFG VG FV ++GAT+G A A L+GR
Sbjct: 52 GPAAPLTYVVVSAVLGALFVPGPILAASSGLLFGPLVGVFV--TLGATVGTAVVASLVGR 109
Query: 104 TIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEY 163
G+ + L R+ AL I+R G V+ R VP + +Y VPL +
Sbjct: 110 RAGRASARALLGGERADRTDAL-IERCGLWAVVGQRFVPGISDAFASYAFGTFGVPLWQM 168
Query: 164 MLASWIGMMPITLALVYVGTTLKDLS 189
+ ++IG P A +G + D S
Sbjct: 169 AVGAFIGSAPRAFAYTALGAAIGDRS 194
>sp|P67115|Y625_MYCTU TVP38/TMEM64 family membrane protein Rv0625c/MT0653
OS=Mycobacterium tuberculosis GN=Rv0625c PE=3 SV=1
Length = 246
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 68/146 (46%), Gaps = 5/146 (3%)
Query: 46 GPWGPLVLAVAYIPLTILAVPASVLTLGGGYLFGLPVG-FVADSIGATIG-AGAAFLLGR 103
GP PL V L L VP +L G LFG VG FV ++GAT+G A A L+GR
Sbjct: 52 GPAAPLTYVVVSAVLGALFVPGPILAASSGLLFGPLVGVFV--TLGATVGTAVVASLVGR 109
Query: 104 TIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEY 163
G+ + L R+ AL I+R G V+ R VP + +Y VPL +
Sbjct: 110 RAGRASARALLGGERADRTDAL-IERCGLWAVVGQRFVPGISDAFASYAFGTFGVPLWQM 168
Query: 164 MLASWIGMMPITLALVYVGTTLKDLS 189
+ ++IG P A +G + D S
Sbjct: 169 AVGAFIGSAPRAFAYTALGAAIGDRS 194
>sp|Q759P7|TVP38_ASHGO Golgi apparatus membrane protein TVP38 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=TVP38 PE=3 SV=1
Length = 307
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 96/193 (49%), Gaps = 16/193 (8%)
Query: 10 RITLLILLVAAVVTACFTLPVEKILKDFLTWVDQDLGPW-------GPLVLAVAYIPLTI 62
R +L+L A V+A + K + + + + +L W L+ V++ PL
Sbjct: 71 RAAVLLLCGGATVSALVMMVFHKSILERMIKISNELRSWWYTPFIFFLLIFFVSFPPL-- 128
Query: 63 LAVPASVLTLGGGYLFGLPV-GFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFR 121
+ S+L G ++G+ G++ S+G +G+ AAF + +T+ + + ++ +F
Sbjct: 129 --IGFSMLCTSAGLVYGVSFKGWLIISLGTVLGSIAAFSVFKTVFRSYAERLIRLNDKFE 186
Query: 122 SVALAIQ-RSGFKIVLLLRLVPLLPFNMLNYLLS-VTPVPLLEYMLASWIGMMPITLALV 179
++A +Q + + I+ LLRL P P+++ N ++ V + + + +A + P +
Sbjct: 187 ALASILQDHNSYWIIALLRLCP-FPYSLTNGAIAGVYGISIRNFSIAQ-VLTTPKLFMYL 244
Query: 180 YVGTTLKDLSDVT 192
++G+ LK+L + +
Sbjct: 245 FIGSRLKNLGESS 257
>sp|A5DH87|TVP38_PICGU Golgi apparatus membrane protein TVP38 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=TVP38 PE=3 SV=2
Length = 349
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 18 VAAVVTACFTLPVEKILKDFLTWVDQDLG--PWGPLVLA-----VAYIPLTILAVPASVL 70
V A+V L K L + L + D P G L+L V + PL + S L
Sbjct: 57 VVAIVIGVLVLIFHKYLIELLVIISDDWAKLPGGRLILFLLVFFVGFPPL----IGYSAL 112
Query: 71 TLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQR- 129
+L G ++G P G+ + + G+ AFL+ R + + +FR+ A ++
Sbjct: 113 SLLAGMVYGFPYGWPLLASASVSGSFVAFLVFRYFLRSQGERLVNSNEKFRAFAEILRED 172
Query: 130 SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLS 189
S +++L+RL PL P+++ N L+ P L + + P L ++VG +K+
Sbjct: 173 SSLFLLVLIRLCPL-PYSLSNGALAAIPELSAWVYLGASVITSPKMLIHLFVGHKIKEFG 231
Query: 190 D 190
D
Sbjct: 232 D 232
>sp|Q6NV38|T41AB_DANRE Transmembrane protein 41A-B OS=Danio rerio GN=tmem41ab PE=2 SV=1
Length = 278
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 51 LVLAVAYIPLTILAVP-ASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPF 109
++ AY+ A+P +S L + G LFG G + T+G+ +LL RT GK
Sbjct: 82 ILFCSAYLYKQSFAIPGSSFLNMLSGALFGPLHGLIIACTLTTVGSTNCYLLSRTFGKRH 141
Query: 110 VISKLKDYPQFRSVALAIQR-------SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLE 162
++ + +P+ VA+ +QR S F +L LR P+ P LN + +P+
Sbjct: 142 IV---RLFPE--KVAM-LQRMVEENRSSLFFFLLFLRFFPMTPNWFLNVTSPILNIPIPI 195
Query: 163 YMLASWIGMMPITLALVYVGTTLKDLSDV 191
+ + IG++P V+ G L +++ +
Sbjct: 196 FFFSILIGLIPYNFICVHTGAVLSEINSL 224
>sp|O31823|YNGC_BACSU Uncharacterized membrane protein YngC OS=Bacillus subtilis (strain
168) GN=yngC PE=3 SV=1
Length = 198
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 58 IPLTILAVPASVLTLGGGYL-----FGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVIS 112
I L I +P+ ++ GGY+ G +A IG TI + +GR G+PF +
Sbjct: 22 IGLMIEIIPSEIVLAYGGYMVSEGTIGFIGAIIAGVIGGTIAQIFIYWIGRYGGRPF-LD 80
Query: 113 KLKDYPQFRSVALAI-----QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLAS 167
K Y + + + Q+ G +V R +P++ + ++ + +P L++++ +
Sbjct: 81 KYGKYLLIKKHHIDMSENWFQKYGAGVVFSARFIPVVR-HAISIPAGIARMPFLKFVVLT 139
Query: 168 WIGMMPITLALVYVGTTLKDLSD 190
+ ++P ++ VY+G L D
Sbjct: 140 VLAIIPWSILFVYLGIQLGSQWD 162
>sp|Q57819|Y374_METJA Uncharacterized protein MJ0374 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0374 PE=4 SV=1
Length = 330
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 52 VLAVAYIPLTILAVPASVLTLGGGYLFGLP--VGFVADSIGATIGAGAAFLLGRTIGKPF 109
+ +++ I +P V +G + FGL + + +IG T+G + LG +G P
Sbjct: 25 IFIISFTEAFIQPIPPDVFIIGASF-FGLNPIISAIVATIGTTLGGLFGYFLGDKLGHPI 83
Query: 110 VISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWI 169
I KL + G V++ PL P+ ++ +L + + L + + + I
Sbjct: 84 FI-KLFGEKYLHKGEEFFNKYGVYGVVIAGFSPL-PYKVIAWLSGIFEMHKLLFTVGTII 141
Query: 170 GMMPITLALVYVGTTLKDLSDVT 192
G +P LA+ Y G L +++ ++
Sbjct: 142 GRLPRFLAVAYFGDVLGNINRLS 164
>sp|A7TMU9|TVP38_VANPO Golgi apparatus membrane protein TVP38 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=TVP38 PE=3 SV=1
Length = 319
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 75/144 (52%), Gaps = 9/144 (6%)
Query: 51 LVLAVAYIPLTILAVPASVLTLGGGYLFGLPV-GFVADSIGATIGAGAAFLLGRTIGKPF 109
L+ VA+ P+ + S+L+ G ++G+ G+V +IGA G+ +F L +TI
Sbjct: 124 LIFFVAFPPM----IGFSLLSTTTGLIYGISFKGWVILAIGAVTGSICSFALFKTILHSR 179
Query: 110 VISKLKDYPQFRSVALAIQRSG-FKIVLLLRLVPLLPFNMLNYLL-SVTPVPLLEYMLAS 167
++ +F + A +Q + + I+ LLRL P P+++ N + +V V + + + +
Sbjct: 180 AEKLIQMNRRFAAFASILQENNSYWILALLRLCP-FPYSLTNGAVGAVYGVSIKNFAIGN 238
Query: 168 WIGMMPITLALVYVGTTLKDLSDV 191
I P L +++G+ +K++ +
Sbjct: 239 II-TTPKLLIYLFIGSRIKNMGET 261
>sp|Q94AD8|FBW3_ARATH F-box/WD-40 repeat-containing protein At5g21040 OS=Arabidopsis
thaliana GN=At5g21040 PE=2 SV=1
Length = 539
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 153 LSVTPVPLLEYMLASWIGMM-PITLALV-YVGTTLKDLSDVTHGWNEFSKTRWAF-LIFG 209
LS T + L + +++ + + P L LV V T L L+ H W EF + RW ++FG
Sbjct: 64 LSTTIIDLPQALISEILNCLDPKELGLVSCVSTYLHRLASEHHAWKEFYRERWGLPVVFG 123
Query: 210 LVVSALAENE 219
S L++
Sbjct: 124 AASSGLSDER 133
>sp|B5Y6U9|GATB_COPPD Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
OS=Coprothermobacter proteolyticus (strain ATCC 35245 /
DSM 5265 / BT) GN=gatB PE=3 SV=1
Length = 474
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 188 LSDVTHGWNEFSKTRWAFLI----FGLVVSALAEN------EDIDAILGSPELPIMAEQP 237
LS+V GWNE +++ + ++ G + +A+A++ DID I + E ++ ++
Sbjct: 353 LSEVGKGWNEINQSYISAILNLQQRGEITAAVAKDLLWQAARDIDPIKYAQEHQLLGKKD 412
Query: 238 VDLNQPLIIKIEGNDDSHEK 257
+DL Q + +E N D+ EK
Sbjct: 413 LDLEQVISEVLEQNPDAVEK 432
>sp|P36164|TVP38_YEAST Golgi apparatus membrane protein TVP38 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TVP38 PE=1 SV=1
Length = 337
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
Query: 51 LVLAVAYIPLTILAVPASVLTLGGGYLFGLPV-GFVADSIGATIGAGAAFLLGRTIGKPF 109
L+ VA+ P+ + S+L+ G ++G+ G+V ++G+ G+ A+F++ +TI
Sbjct: 143 LIFFVAFPPM----IGYSLLSTTTGLIYGVSFEGWVTLALGSVTGSIASFVVFKTILHSR 198
Query: 110 VISKLKDYPQFRSVALAIQRSG-FKIVLLLRLVPLLPFNMLNYLLS-VTPVPLLEYMLAS 167
+ +F ++A +Q + + I+ LLRL P P+++ N ++ V + + + +A+
Sbjct: 199 AEKLVHLNRRFEALASILQENNSYWILALLRLCP-FPYSLTNGAIAGVYGISVRNFSIAN 257
Query: 168 WIGMMPITLALVYVGTTLKDLSD 190
I P +++G+ +K L++
Sbjct: 258 II-TTPKLFIYLFIGSRVKSLAE 279
>sp|A7A047|TVP38_YEAS7 Golgi apparatus membrane protein TVP38 OS=Saccharomyces cerevisiae
(strain YJM789) GN=TVP38 PE=3 SV=1
Length = 337
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
Query: 51 LVLAVAYIPLTILAVPASVLTLGGGYLFGLPV-GFVADSIGATIGAGAAFLLGRTIGKPF 109
L+ VA+ P+ + S+L+ G ++G+ G+V ++G+ G+ A+F++ +TI
Sbjct: 143 LIFFVAFPPM----IGYSLLSTTTGLIYGVSFEGWVTLALGSVTGSIASFVVFKTILHSR 198
Query: 110 VISKLKDYPQFRSVALAIQRSG-FKIVLLLRLVPLLPFNMLNYLLS-VTPVPLLEYMLAS 167
+ +F ++A +Q + + I+ LLRL P P+++ N ++ V + + + +A+
Sbjct: 199 AEKLVHLNRRFEALASILQENNSYWILALLRLCP-FPYSLTNGAIAGVYGISVRNFSIAN 257
Query: 168 WIGMMPITLALVYVGTTLKDLSD 190
I P +++G+ +K L++
Sbjct: 258 II-TTPKLFIYLFIGSRVKSLAE 279
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.143 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,345,238
Number of Sequences: 539616
Number of extensions: 3989726
Number of successful extensions: 15023
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 14933
Number of HSP's gapped (non-prelim): 87
length of query: 257
length of database: 191,569,459
effective HSP length: 115
effective length of query: 142
effective length of database: 129,513,619
effective search space: 18390933898
effective search space used: 18390933898
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)