Your job contains 1 sequence.
>025122
MQPTAGGSSSSSGGGGGGVGGRGELSRGGLARLRSAPASWIDALLEEELEDPLKPNQCLT
QLLSSGDPVSVTAGLSLSQSQLDQVGFQRQNSSPADLFDGYFSNYATPSSYDYVDVSPNS
NKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAK
RGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVL
HFLENSPFGGSETGIEL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025122
(257 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 467 2.4e-44 1
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 452 9.3e-43 1
TAIR|locus:2026037 - symbol:FBH3 "AT1G51140" species:3702... 260 4.4e-25 2
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 273 8.7e-24 1
TAIR|locus:505006103 - symbol:AT1G05805 "AT1G05805" speci... 239 3.4e-23 2
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 247 4.9e-21 1
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 219 4.6e-18 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 159 5.6e-13 2
TAIR|locus:2183078 - symbol:SRS8 "AT5G33210" species:3702... 154 3.5e-11 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 153 1.2e-10 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 146 3.7e-10 2
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 152 5.0e-10 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 148 2.4e-09 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 148 2.5e-09 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 141 5.5e-09 2
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 143 2.0e-08 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 143 2.2e-08 1
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 144 2.8e-08 1
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 141 5.1e-08 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 138 2.0e-07 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 132 1.3e-06 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 130 1.6e-06 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 128 1.6e-06 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 126 1.8e-06 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 132 1.9e-06 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 123 4.2e-06 2
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 126 5.4e-06 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 124 5.4e-06 1
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 128 5.9e-06 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 130 6.4e-06 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 126 6.5e-06 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 127 6.7e-06 1
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 125 1.1e-05 2
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 122 1.3e-05 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 122 1.4e-05 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 124 1.7e-05 1
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 122 1.8e-05 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 122 1.9e-05 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 121 2.7e-05 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 118 3.3e-05 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 119 5.8e-05 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 118 6.6e-05 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 116 6.7e-05 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 104 6.9e-05 2
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 114 9.9e-05 1
UNIPROTKB|Q6K8J6 - symbol:OJ1669_F01.28 "Putative unchara... 105 0.00010 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 112 0.00011 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 115 0.00013 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 113 0.00014 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 111 0.00031 1
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 114/218 (52%), Positives = 138/218 (63%)
Query: 37 PASWIDAXXXXXXXDPLKPNQCLTQLLS--SGD-PVSVTA---GLSLSQSQLDQVGFQRQ 90
PA+W++A + LKPN LT LL+ S D P S + + + Q Q GF RQ
Sbjct: 36 PATWLEALLEEDEEESLKPNLGLTDLLTGNSNDLPTSRGSFEFPIPVEQGLYQQGGFHRQ 95
Query: 91 NSSPADLF---DGYFSNYATPSSYDY----VDVSPNSNKRAREDNNTQFPSPTAKLNFHS 143
NS+PAD DG+ ++ ++YDY +DVSP S KR+RE F SP F S
Sbjct: 96 NSTPADFLSGSDGFIQSFGIQANYDYLSGNIDVSPGS-KRSRE-MEALFSSP----EFTS 149
Query: 144 HLKVEQS-GQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAEXXXXXXXXXX 202
+K EQS GQVP GVS++ DM+ME L+EDSV RVRAKRGCATHPRSIAE
Sbjct: 150 QMKGEQSSGQVPTGVSSMSDMNMENLMEDSVAFRVRAKRGCATHPRSIAERVRRTRISDR 209
Query: 203 XXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVL 240
KLQ+LVPNMDKQTNTADMLEEAVEYVK LQ+QI+ L
Sbjct: 210 IRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQEL 247
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 113/227 (49%), Positives = 137/227 (60%)
Query: 37 PASWIDAXXXXXXXDPLKPNQCLTQLLS----SGDPVSVTAGLSLSQSQLDQV------- 85
PA+WI+ + LKPN CLT+LL+ SG ++ S ++Q
Sbjct: 33 PATWIETLLEEDEEEGLKPNLCLTELLTGNNNSGGVITSRDDSFEFLSSVEQGLYNHHQG 92
Query: 86 -GFQRQNSSPADLF-------DGYFSNYATPSSYDY----VDVSPNSNKRAREDNNTQFP 133
GF RQNSSPAD DGYFSN+ P++YDY VD+SP KR+R D TQF
Sbjct: 93 GGFHRQNSSPADFLSGSGSGTDGYFSNFGIPANYDYLSTNVDISPT--KRSR-DMETQFS 149
Query: 134 SPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAEX 193
S LK EQ + GG+S ++DM+M+K+ EDSVPCRVRAKRGCATHPRSIAE
Sbjct: 150 S---------QLKEEQ---MSGGISGMMDMNMDKIFEDSVPCRVRAKRGCATHPRSIAER 197
Query: 194 XXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVL 240
+LQ+LVPNMDKQTNTADMLEEAVEYVK LQ QI+ L
Sbjct: 198 VRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQEL 244
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 260 (96.6 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 49/77 (63%), Positives = 60/77 (77%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADML 223
D+E+LL DS+PC++RAKRGCATHPRSIAE KLQDLVPNMD QTNTADML
Sbjct: 291 DIEQLLSDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADML 350
Query: 224 EEAVEYVKFLQKQIEVL 240
+ AV+Y+K LQ+Q++ L
Sbjct: 351 DLAVQYIKDLQEQVKAL 367
Score = 40 (19.1 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 89 RQNSSPADLFDGYFSNYATPSSYDYVDVSPNSNKRAREDNNTQFPSPTAKL 139
R NSSPA LF A + + SN + + +P +KL
Sbjct: 154 RHNSSPAGLFSSIDVETAYAAVMKSMGGFGGSNVMSTSNTEASSLTPRSKL 204
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 70/172 (40%), Positives = 97/172 (56%)
Query: 76 SLSQSQLDQVGFQRQNSSPADLFDGYFSNYATPSSYDYVDVSPNSNKRAREDNNTQF--- 132
SLS +G Q A + +S++ PSS+ +D + +S KR ED+ F
Sbjct: 178 SLSSRPPSSLGMLSQIPEIAPETNFPYSHWNDPSSF--ID-NLSSLKREAEDDGKLFLGA 234
Query: 133 ---PSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRS 189
S HL + +S S++V +D L+DSVPC++RAKRGCATHPRS
Sbjct: 235 QNGESGNRMQLLSHHLSLPKSSST---ASDMVSVDKYLQLQDSVPCKIRAKRGCATHPRS 291
Query: 190 IAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVLH 241
IAE KLQ+LVPNMDKQTNT+DML+ AV+Y+K LQ+Q ++L+
Sbjct: 292 IAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILN 343
>TAIR|locus:505006103 [details] [associations]
symbol:AT1G05805 "AT1G05805" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC009999 HOGENOM:HOG000242890 EMBL:BT000954 EMBL:AY086106
IPI:IPI00516925 PIR:F86192 RefSeq:NP_563749.1 UniGene:At.11933
ProteinModelPortal:Q8H102 SMR:Q8H102 IntAct:Q8H102 STRING:Q8H102
PaxDb:Q8H102 PRIDE:Q8H102 EnsemblPlants:AT1G05805.1 GeneID:837090
KEGG:ath:AT1G05805 TAIR:At1g05805 eggNOG:NOG249421
InParanoid:Q8H102 OMA:NEVNETP PhylomeDB:Q8H102
ProtClustDB:CLSN2687697 Genevestigator:Q8H102 Uniprot:Q8H102
Length = 362
Score = 239 (89.2 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 61/122 (50%), Positives = 77/122 (63%)
Query: 133 PSPTAKLNFHSHLKVEQSGQVPGGVS-NLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIA 191
PS +K + S L + S +P S N +D M+ L EDSVPC++RAKRGCATHPRSIA
Sbjct: 242 PSKRSK-DMDSGLFSQYS--LPSDTSMNYMDNFMQ-LPEDSVPCKIRAKRGCATHPRSIA 297
Query: 192 EXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVLHF-LENSPFGG 250
E KLQDLVPNMDKQT+ +DML+ AV+++K LQ Q++ L EN G
Sbjct: 298 ERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGC 357
Query: 251 SE 252
SE
Sbjct: 358 SE 359
Score = 44 (20.5 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 70 SVTAGLSLSQSQLDQVGFQRQNSSPADLF 98
S T G++ S Q+G N+S D+F
Sbjct: 80 STTCGVNNSSDGQKQLGNNNNNNSNKDIF 108
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 49/79 (62%), Positives = 61/79 (77%)
Query: 165 MEKLLE--DSVPCRVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADM 222
+EK L+ D+VPC++RAKRGCATHPRSIAE KLQ+LVPNMDKQTNTADM
Sbjct: 55 IEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADM 114
Query: 223 LEEAVEYVKFLQKQIEVLH 241
L+ AV+Y+K LQKQ++ L+
Sbjct: 115 LDLAVDYIKDLQKQVKGLN 133
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 57/123 (46%), Positives = 75/123 (60%)
Query: 126 EDNNT-QFPSPTAKLNFHSHLKVEQSGQVPGGVSNLV---DM-DMEKLLE---DSVPCRV 177
ED+N+ F + T K H + + + + S LV +M +EK L+ D VP RV
Sbjct: 77 EDSNSIVFSTSTGKSGAHGNDDIIAT--LSNYESQLVAPREMAGVEKYLQMQHDQVPFRV 134
Query: 178 RAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RAKRGCATHPRSIAE KLQ LVPNMDKQT+T+DML+ AV+++K LQ Q+
Sbjct: 135 RAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQL 194
Query: 238 EVL 240
+ L
Sbjct: 195 QTL 197
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 159 (61.0 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 39/82 (47%), Positives = 49/82 (59%)
Query: 176 RVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAE LQ+LVPN +K TN A ML+E ++YVKFLQ
Sbjct: 313 RVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQL 371
Query: 236 QIEVLHFLENSPFGGSETGIEL 257
Q++VL S G +E + L
Sbjct: 372 QVKVLSM---SRLGAAEAVVPL 390
Score = 43 (20.2 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 28/124 (22%), Positives = 47/124 (37%)
Query: 53 LKPNQCLTQLLSSGDPVSVTAGLSLSQSQLDQVGFQRQNSSPAD--LFDGYFSNYATPSS 110
L+P C L SG P + S S D G + + PA G + P++
Sbjct: 100 LEP--CAMPLTDSGGPPVIC-----SSSSNDSSGSEHSAAMPAGGGFLVGEQQQHVPPAA 152
Query: 111 YDYVDVSPNSNKRAREDNNTQFPS-------PTAKLN-FHSHLKVEQSGQVPGGVSNLVD 162
Y V P+ + F S A ++ +H H + +Q G VP + ++
Sbjct: 153 YAAGGVLPSMAAGEETPQSFGFGSLFNGDLLQEATVSKYHHHQQQQQLGVVPSSQPHHLN 212
Query: 163 MDME 166
D++
Sbjct: 213 DDID 216
>TAIR|locus:2183078 [details] [associations]
symbol:SRS8 "AT5G33210" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 InterPro:IPR007818 InterPro:IPR006510
Pfam:PF05142 TIGRFAMs:TIGR01623 IPI:IPI00529608 RefSeq:NP_198306.1
UniGene:At.55108 EnsemblPlants:AT5G33210.1 GeneID:833279
KEGG:ath:AT5G33210 PhylomeDB:F4KH89 ArrayExpress:F4KH89
Uniprot:F4KH89
Length = 173
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 28/32 (87%), Positives = 31/32 (96%)
Query: 161 VDMDMEKLLEDSVPCRVRAKRGCATHPRSIAE 192
+DM+MEK+ EDSVPCRVRAKRGCATHPRSIAE
Sbjct: 1 MDMNMEKIFEDSVPCRVRAKRGCATHPRSIAE 32
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 153 (58.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 37/76 (48%), Positives = 47/76 (61%)
Query: 176 RVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAE LQ+LVPN +K T+ A ML+E +EYV+FLQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 236 QIEVLHFLENSPFGGS 251
Q++VL S GG+
Sbjct: 157 QVKVLSM---SRLGGA 169
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 146 (56.5 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 35/76 (46%), Positives = 47/76 (61%)
Query: 176 RVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
++RA+RG AT P SIAE LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 137 KIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQL 195
Query: 236 QIEVLHFLENSPFGGS 251
Q++VL S GG+
Sbjct: 196 QVKVLSM---SRLGGA 208
Score = 40 (19.1 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 16/65 (24%), Positives = 24/65 (36%)
Query: 96 DLFDGYFSNYATPSSYDYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSG-QVP 154
D D FS+ PS D P+ + ++ P LN S + +G V
Sbjct: 28 DFLDQIFSSAPWPSVVDDAHPLPSDGFHGHDVDSRNQPIMMMPLNDGSSVHALYNGFSVA 87
Query: 155 GGVSN 159
G + N
Sbjct: 88 GSLPN 92
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 152 (58.6 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 38/85 (44%), Positives = 50/85 (58%)
Query: 176 RVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDK--QTNTADMLEEAVEYVKFL 233
RVRA+RG AT P SIAE LQ+LVPN +K QT+ A ML+E ++YVKFL
Sbjct: 249 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFL 308
Query: 234 QKQIE-------VLHFLENSPFGGS 251
Q Q++ ++H L S GG+
Sbjct: 309 QLQVKASTYTKLLIHVLSMSRLGGA 333
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 148 (57.2 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 46/147 (31%), Positives = 66/147 (44%)
Query: 96 DLFDGYFSNYATPSSYDYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPG 155
D DG S SS+ V N + RA N + P + +K E + P
Sbjct: 62 DTTDGCISR---TSSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETE-PS 117
Query: 156 --GVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNM 213
G SN+ + + ++ VRA+RG AT S+AE LQD+VP
Sbjct: 118 MKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGC 177
Query: 214 DKQTNTADMLEEAVEYVKFLQKQIEVL 240
+K T A ML+E + YV+ LQ+Q+E L
Sbjct: 178 NKVTGKAGMLDEIINYVQSLQQQVEFL 204
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 148 (57.2 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 36/76 (47%), Positives = 47/76 (61%)
Query: 176 RVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAE LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 129 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 187
Query: 236 QIEVLHFLENSPFGGS 251
Q++VL S GG+
Sbjct: 188 QVKVLSM---SRLGGA 200
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 141 (54.7 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 35/76 (46%), Positives = 47/76 (61%)
Query: 176 RVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAE LQ+LVPN +K T+ A ML+E ++YVKFL+
Sbjct: 132 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 190
Query: 236 QIEVLHFLENSPFGGS 251
Q++VL S GG+
Sbjct: 191 QVKVLSM---SRLGGA 203
Score = 35 (17.4 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 88 QRQNSSPADLFDGYFS 103
Q+Q D FD +FS
Sbjct: 7 QQQGPPEDDFFDQFFS 22
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 143 (55.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 35/82 (42%), Positives = 50/82 (60%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEY 229
+ ++ RVRA+RG AT P SIAE LQ+LVP ++K T+ A M++E V+Y
Sbjct: 137 QSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDY 195
Query: 230 VKFLQKQIEVLHFLENSPFGGS 251
VKFL+ Q++VL S GG+
Sbjct: 196 VKFLRLQVKVLSM---SRLGGA 214
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 143 (55.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 172 SVPCRVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S+ RVRA+RG AT P SIAE LQ+LVP ++K T+ A M++E V+YVK
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 232 FLQKQIEVLHFLENSPFGGS 251
FL+ Q++VL S GG+
Sbjct: 200 FLRLQVKVLSM---SRLGGA 216
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 144 (55.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 42/125 (33%), Positives = 58/125 (46%)
Query: 118 PNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVP--GGVSNLVDMDMEKLLEDSVPC 175
PN + +++ PS +A + HS K E+S GG S +
Sbjct: 187 PNEVMGTDQVHSSNLPSDSANESVHSKDKGEESSPATTNGGKSKGKGAKETSESQKEEYI 246
Query: 176 RVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT+ S+AE LQDLVP K T A ML+E + YV+ LQ+
Sbjct: 247 HVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 306
Query: 236 QIEVL 240
Q+E L
Sbjct: 307 QVEFL 311
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 141 (54.7 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 47/129 (36%), Positives = 60/129 (46%)
Query: 112 DYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLED 171
D V+ + E NN S K+ H K E + S+ V ++EK D
Sbjct: 116 DLVEEGEEEKSKITEQNNGSTKS-IKKMK-HKAKKEENNFS---NDSSKVTKELEKT--D 168
Query: 172 SVPCRVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVK 231
+ VRA+RG AT SIAE LQDLVP DK T A ML+E + YV+
Sbjct: 169 YI--HVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQ 226
Query: 232 FLQKQIEVL 240
LQ+QIE L
Sbjct: 227 SLQRQIEFL 235
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 138 (53.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 32/65 (49%), Positives = 40/65 (61%)
Query: 176 RVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R RA+RG AT P SIAE LQ LVPN +K + A ML+E ++YVKFLQ
Sbjct: 238 RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQL 296
Query: 236 QIEVL 240
Q++VL
Sbjct: 297 QVKVL 301
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 132 (51.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 39/98 (39%), Positives = 50/98 (51%)
Query: 146 KVEQSGQVPGGVSNLVDMDMEKLLEDSVP---CRVRAKRGCATHPRSIAEXXXXXXXXXX 202
K ++ Q P SN + EK DS+ +RA+RG AT+ S+AE
Sbjct: 191 KKQKDEQSP--TSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISER 248
Query: 203 XXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVL 240
LQDLVP DK T A ML+E + YV+ LQ QIE L
Sbjct: 249 MKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFL 286
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 130 (50.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEY 229
ED V VRAKRG AT+ S+AE LQDLVP K T A ML+E + Y
Sbjct: 142 EDYV--HVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINY 199
Query: 230 VKFLQKQIEVL 240
V+ LQ+Q+E L
Sbjct: 200 VQSLQRQVEFL 210
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 128 (50.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 34/77 (44%), Positives = 43/77 (55%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADML 223
D EK SV + RA +G AT P+S+ LQ+LVPN K + + ML
Sbjct: 154 DDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTML 212
Query: 224 EEAVEYVKFLQKQIEVL 240
EEAV YVKFLQ QI++L
Sbjct: 213 EEAVHYVKFLQLQIKLL 229
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 126 (49.4 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 49/146 (33%), Positives = 68/146 (46%)
Query: 103 SNYATPSSYDYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGG--VSNL 160
SNYA + D + N N +R+D P KL+ S+L E G +S+
Sbjct: 54 SNYA--AVLDGSNHQTNRNVDSRQD--LLKPRKKQKLSSESNLVTEPKTAWRDGQSLSSY 109
Query: 161 VDMDMEKLL------EDSVPCRVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMD 214
D EK L S+ + +A RG A+ P+S+ LQ LVPN
Sbjct: 110 NSSDDEKALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGT 169
Query: 215 KQTNTADMLEEAVEYVKFLQKQIEVL 240
K + + MLE+AV YVKFLQ QI++L
Sbjct: 170 K-VDISTMLEDAVHYVKFLQLQIKLL 194
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 132 (51.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 40/122 (32%), Positives = 55/122 (45%)
Query: 121 NKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVP--CRVR 178
N A + + +Q N EQS PG SN ++ + VR
Sbjct: 245 NSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVR 304
Query: 179 AKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
A+RG AT+ S+AE LQDLVP +K T A ML+E + YV+ LQ+Q+E
Sbjct: 305 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 364
Query: 239 VL 240
L
Sbjct: 365 FL 366
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 123 (48.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 177 VRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AE LQDLVP ++ T A ML+E + YV+ LQ+Q
Sbjct: 191 VRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQ 250
Query: 237 IEVL 240
+E L
Sbjct: 251 VEFL 254
Score = 39 (18.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 128 NNTQFPSPTAKLNFHSHLKVEQSGQVPGGV 157
NN Q SP +F + ++ ++ + GG+
Sbjct: 39 NNPQEISPLTLQSFSLNSQISENFPISGGI 68
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 126 (49.4 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 53/185 (28%), Positives = 82/185 (44%)
Query: 64 SSGDPVSVTAGLSLSQSQLDQVGFQRQNSSPADLFD--GYFSNYATPSSYDYVDVSPNS- 120
SS +VT+G +S + L G S+ L D FS AT + ++ + NS
Sbjct: 66 SSSQARTVTSG-DISPTTLHPFGALTFPSNSL-LLDRAARFSVIATEQNGNFSGETANSL 123
Query: 121 --NKRAREDNNTQFPSPTAKL--NFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVP-C 175
N A D P+ T + N + + + V + + + D +P
Sbjct: 124 PSNPGANLDRVKAEPAETDSMVENQNQSYSSGKRKEREKKVKSSTKKNKSSVESDKLPYV 183
Query: 176 RVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AE LQ+LVP DK TA +L+E + +V+ LQ+
Sbjct: 184 HVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQR 243
Query: 236 QIEVL 240
Q+E+L
Sbjct: 244 QVEML 248
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 124 (48.7 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 40/139 (28%), Positives = 68/139 (48%)
Query: 103 SNYATPSSYDYVDVS-PNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLV 161
+N+++ SS+ + D + + K+ + T S T+ ++ ++++ ++G + G
Sbjct: 71 NNFSSTSSFLHSDHNIVDETKKRKALLPTLSSSETSGVSDNTNVIATETGSLRRGKRLKK 130
Query: 162 DMDMEKLLEDSVPCRVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTAD 221
+ E E V VRA+RG AT S+AE LQD+VP K A
Sbjct: 131 KKEEEDEKEREV-VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMAT 189
Query: 222 MLEEAVEYVKFLQKQIEVL 240
ML+E + YV+ LQ Q+E L
Sbjct: 190 MLDEIINYVQSLQNQVEFL 208
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 128 (50.1 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 45/133 (33%), Positives = 63/133 (47%)
Query: 117 SPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSV--- 173
SP S A+ED++ + T + N + E SG+ SN + +K +DS
Sbjct: 211 SPMSTSAAKEDSSGKRCKSTEESNAAAE---ENSGKGKAAQSNSENGGGKKQGKDSSSKP 267
Query: 174 P------CRVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAV 227
P VRA+RG AT S+AE LQDLVP +K A ML+E +
Sbjct: 268 PEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEII 327
Query: 228 EYVKFLQKQIEVL 240
YV+ LQ+Q+E L
Sbjct: 328 NYVQSLQRQVEFL 340
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 130 (50.8 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 38/96 (39%), Positives = 51/96 (53%)
Query: 145 LKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAEXXXXXXXXXXXX 204
L +E +G+ G D D + E+ V VRAKRG AT+ S+AE
Sbjct: 606 LSMEHAGEKAG------DADASR--EEYV--HVRAKRGQATNSHSLAERFRREKINERMK 655
Query: 205 KLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVL 240
LQDLVP +K T A ML+E + YV+ LQ+Q+E L
Sbjct: 656 LLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFL 691
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 126 (49.4 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 29/64 (45%), Positives = 37/64 (57%)
Query: 177 VRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AE LQ+LVP +K T A ML+E + YV+ LQKQ
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 237 IEVL 240
+E L
Sbjct: 224 VEFL 227
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 127 (49.8 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 31/71 (43%), Positives = 40/71 (56%)
Query: 170 EDSVPCRVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEY 229
ED + VRA+RG AT+ S+AE LQDLVP K T A ML+E + Y
Sbjct: 255 EDYI--HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINY 312
Query: 230 VKFLQKQIEVL 240
V+ LQ+Q+E L
Sbjct: 313 VQSLQRQVEFL 323
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 125 (49.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 35/93 (37%), Positives = 49/93 (52%)
Query: 148 EQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQ 207
E+ G+ G SN + + +D + VRA+RG AT S+AE LQ
Sbjct: 276 EEEGEGEGNKSN--NTKPPEPPKDYI--HVRARRGQATDSHSLAERVRREKIGERMKLLQ 331
Query: 208 DLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVL 240
DLVP +K T A ML+E + YV+ LQ+Q+E L
Sbjct: 332 DLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 364
Score = 36 (17.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 129 NTQFPSPTAKLNFHSHLKVEQSGQV 153
NT+FP P H + S +
Sbjct: 8 NTEFPPPPEMATHFEHQQSSSSAMM 32
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 122 (48.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 29/64 (45%), Positives = 36/64 (56%)
Query: 177 VRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AE LQ+LVP DK T A ML+E + YV+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQ 195
Query: 237 IEVL 240
+E L
Sbjct: 196 VEFL 199
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 122 (48.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 42/120 (35%), Positives = 59/120 (49%)
Query: 148 EQSGQVPGGVSNLVDMDMEKLLE--DSVPC---RVRAKRGCATHPRSIAEXXXXXXXXXX 202
+ S +P G ++ D D E D+ + RA RG AT P+S+
Sbjct: 182 DASVAIPNGSCSISDNDSSSSQEVADAGATSKGKSRAGRGAATDPQSLYARKRRERINER 241
Query: 203 XXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVLHFLEN---SP--FGGSETGIEL 257
LQ+LVPN K + + MLEEAV YVKFLQ QI++L E +P + G G++L
Sbjct: 242 LKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQIKLLSSDEMWMYAPIAYNGMNIGLDL 300
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 124 (48.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 29/64 (45%), Positives = 37/64 (57%)
Query: 177 VRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AE LQDLVP +K T A ML+E + YV+ LQ+Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 317
Query: 237 IEVL 240
+E L
Sbjct: 318 VEFL 321
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 122 (48.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 29/64 (45%), Positives = 35/64 (54%)
Query: 177 VRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AE LQ LVP DK T A ML+E + YV+ LQ Q
Sbjct: 180 VRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQ 239
Query: 237 IEVL 240
+E L
Sbjct: 240 VEFL 243
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 122 (48.0 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 40/120 (33%), Positives = 57/120 (47%)
Query: 122 KRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGV-SNLVDMDMEKLLEDSVPCRVRAK 180
K + N + F + + + Q GG S+ + D K L ++ + RA
Sbjct: 212 KLKKRKNGAMMSRQNSSTTFCTEEESNCADQDGGGEDSSSKEDDPSKAL--NLNGKTRAS 269
Query: 181 RGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVL 240
RG AT P+S+ LQ+LVPN K + + MLEEAV YVKFLQ QI++L
Sbjct: 270 RGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQLQIKLL 328
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 121 (47.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 177 VRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA++G AT+ S+AE LQDLVP K T A ML+E + YV+ LQ+Q
Sbjct: 176 VRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQ 235
Query: 237 IEVL 240
+E L
Sbjct: 236 VEFL 239
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 118 (46.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 29/80 (36%), Positives = 40/80 (50%)
Query: 177 VRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AE LQDLVP +K A +L+E + Y++ LQ+Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 195
Query: 237 IEVLHFLENSPFGGSETGIE 256
+E L + GIE
Sbjct: 196 VEFLSMKLEAVNAHVNNGIE 215
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 119 (46.9 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 43/126 (34%), Positives = 56/126 (44%)
Query: 119 NSNKRAREDNNTQFPSPTAKLN-FHSHLKVEQSG---QVPGGVSNLVDMDMEKLLEDSVP 174
+ KR + N + S K S VE G Q G N ++ K D V
Sbjct: 147 SDGKRCKTGNGEKESSVKPKAEQAGSDSSVEDGGGGGQKQGKGKNAKPVEPPK---DYV- 202
Query: 175 CRVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AE LQDLVP +K A ML+E + YV+ LQ
Sbjct: 203 -HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQ 261
Query: 235 KQIEVL 240
+Q+E L
Sbjct: 262 RQVEFL 267
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 118 (46.6 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 177 VRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
+RA+RG AT+ S+AE LQ+LVP +K T A ML+E + YV+ LQ+Q
Sbjct: 206 MRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 265
Query: 237 IEVL 240
+E L
Sbjct: 266 VEFL 269
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 116 (45.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 177 VRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AE LQD++P +K A +L+E + Y++ LQ+Q
Sbjct: 153 VRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQ 212
Query: 237 IEVLHFLENSPFGGSETG 254
+E L G+ TG
Sbjct: 213 VEFLSMKLEVVNSGASTG 230
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 104 (41.7 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 206 LQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVLHFLENSPFGGS 251
LQ+LVPN +K T+ A ML+E ++YVKFLQ Q++VL S GG+
Sbjct: 263 LQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM---SRLGGA 304
Score = 54 (24.1 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 12/17 (70%), Positives = 13/17 (76%)
Query: 176 RVRAKRGCATHPRSIAE 192
R RA+RG AT P SIAE
Sbjct: 211 RQRARRGQATDPHSIAE 227
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 114 (45.2 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 28/64 (43%), Positives = 34/64 (53%)
Query: 177 VRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT SIAE LQD+VP K A ML+E + YV+ LQ Q
Sbjct: 147 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 206
Query: 237 IEVL 240
+E L
Sbjct: 207 VEFL 210
>UNIPROTKB|Q6K8J6 [details] [associations]
symbol:OJ1669_F01.28 "Putative uncharacterized protein
OJ1669_F01.28" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] GO:GO:0005634
HOGENOM:HOG000242890 EMBL:AP004124 Gramene:Q6K8J6 Uniprot:Q6K8J6
Length = 153
Score = 105 (42.0 bits), Expect = 0.00010, P = 0.00010
Identities = 23/43 (53%), Positives = 26/43 (60%)
Query: 151 GQVPGGVSNLVDMDME-KLLEDSVPCRVRAKRGCATHPRSIAE 192
G + MD +L D VP +VRAKRGCATHPRSIAE
Sbjct: 87 GMASTSALEMAGMDRYLQLQHDQVPFKVRAKRGCATHPRSIAE 129
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 112 (44.5 bits), Expect = 0.00011, P = 0.00011
Identities = 29/64 (45%), Positives = 34/64 (53%)
Query: 177 VRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRAKRG AT S+AE LQDLVP K A ML+ ++YV+ LQ Q
Sbjct: 104 VRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQ 163
Query: 237 IEVL 240
IE L
Sbjct: 164 IEFL 167
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 115 (45.5 bits), Expect = 0.00013, P = 0.00013
Identities = 29/81 (35%), Positives = 41/81 (50%)
Query: 177 VRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AE LQDLVP +K A +L+E + Y++ LQ+Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 237 IEVLHFLENSPFGGSETGIEL 257
+E L + GIE+
Sbjct: 196 VEFLSMKLEAVNSRMNPGIEV 216
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 34/109 (31%), Positives = 51/109 (46%)
Query: 135 PTAKLNFHSHLKVEQSGQVPGGVSNLVDMDM---EKLLEDSVPCRVRAKRGCATHPRSIA 191
P + + L+ E +G G S D + E +D + VRA+RG AT S+A
Sbjct: 86 PMKSSDKNDSLRTE-AGTDSGNSSKAADKNATPPEPPKQDYI--HVRARRGQATDSHSLA 142
Query: 192 EXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVL 240
E LQDLVP +K A +L+E + Y++ LQ Q+E +
Sbjct: 143 ERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFM 191
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 111 (44.1 bits), Expect = 0.00031, P = 0.00031
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 174 PCRVRAKRGCATHPRSIAEXXXXXXXXXXXXKLQDLVPNMDKQTNTADMLEEAVEYVKFL 233
P R R KR A +++E LQ L+PN K T+ A ML++A+EY+K L
Sbjct: 23 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQL 81
Query: 234 QKQIEVL 240
Q Q+++L
Sbjct: 82 QLQVQML 88
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.129 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 257 206 0.00097 111 3 11 23 0.42 33
31 0.47 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 50
No. of states in DFA: 597 (63 KB)
Total size of DFA: 166 KB (2098 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.96u 0.08s 20.04t Elapsed: 00:00:01
Total cpu time: 19.97u 0.08s 20.05t Elapsed: 00:00:01
Start: Thu May 9 16:54:03 2013 End: Thu May 9 16:54:04 2013