BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025122
(257 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 232 bits (592), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/243 (58%), Positives = 167/243 (68%), Gaps = 44/243 (18%)
Query: 24 ELSRGGLARLRSAPASWIDALLEEELEDPLKPNQCLTQLLS----SGDPV---------- 69
E+SR GL+R+RSAPA+WI+ LLEE+ E+ LKPN CLT+LL+ SG +
Sbjct: 20 EVSRSGLSRIRSAPATWIETLLEEDEEEGLKPNLCLTELLTGNNNSGGVITSRDDSFEFL 79
Query: 70 -SVTAGLSLSQSQLDQVGFQRQNSSPADLF-------DGYFSNYATPSSYDY----VDVS 117
SV GL + GF RQNSSPAD DGYFSN+ P++YDY VD+S
Sbjct: 80 SSVEQGL---YNHHQGGGFHRQNSSPADFLSGSGSGTDGYFSNFGIPANYDYLSTNVDIS 136
Query: 118 PNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRV 177
P KR+R D TQF S LK EQ + GG+S ++DM+M+K+ EDSVPCRV
Sbjct: 137 PT--KRSR-DMETQFSS---------QLKEEQ---MSGGISGMMDMNMDKIFEDSVPCRV 181
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
RAKRGCATHPRSIAERVRRTRISDRIR+LQ+LVPNMDKQTNTADMLEEAVEYVK LQ QI
Sbjct: 182 RAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQI 241
Query: 238 EVL 240
+ L
Sbjct: 242 QEL 244
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 214 bits (546), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/229 (59%), Positives = 160/229 (69%), Gaps = 32/229 (13%)
Query: 32 RLRSAPASWIDALLEEELEDPLKPNQCLTQLLS--SGD----------PVSVTAGLSLSQ 79
R+RSAPA+W++ALLEE+ E+ LKPN LT LL+ S D P+ V GL
Sbjct: 31 RIRSAPATWLEALLEEDEEESLKPNLGLTDLLTGNSNDLPTSRGSFEFPIPVEQGL---- 86
Query: 80 SQLDQVGFQRQNSSPADLF---DGYFSNYATPSSYDY----VDVSPNSNKRAREDNNTQF 132
Q GF RQNS+PAD DG+ ++ ++YDY +DVSP S KR+RE F
Sbjct: 87 --YQQGGFHRQNSTPADFLSGSDGFIQSFGIQANYDYLSGNIDVSPGS-KRSRE-MEALF 142
Query: 133 PSPTAKLNFHSHLKVEQS-GQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIA 191
SP F S +K EQS GQVP GVS++ DM+ME L+EDSV RVRAKRGCATHPRSIA
Sbjct: 143 SSP----EFTSQMKGEQSSGQVPTGVSSMSDMNMENLMEDSVAFRVRAKRGCATHPRSIA 198
Query: 192 ERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVL 240
ERVRRTRISDRIRKLQ+LVPNMDKQTNTADMLEEAVEYVK LQ+QI+ L
Sbjct: 199 ERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQEL 247
>sp|Q9C690|BH122_ARATH Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122
PE=1 SV=1
Length = 379
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 72/77 (93%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D+E+LL DS+PC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQDLVPNMD QTNTADML
Sbjct: 291 DIEQLLSDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADML 350
Query: 224 EEAVEYVKFLQKQIEVL 240
+ AV+Y+K LQ+Q++ L
Sbjct: 351 DLAVQYIKDLQEQVKAL 367
>sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130
PE=1 SV=1
Length = 359
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 81/98 (82%), Gaps = 3/98 (3%)
Query: 144 HLKVEQSGQVPGGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRI 203
HL + +S S++V +D L+DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+
Sbjct: 249 HLSLPKSSST---ASDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERM 305
Query: 204 RKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVLH 241
RKLQ+LVPNMDKQTNT+DML+ AV+Y+K LQ+Q ++L+
Sbjct: 306 RKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILN 343
>sp|Q8H102|BH128_ARATH Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128
PE=1 SV=1
Length = 362
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Query: 159 NLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTN 218
N +D M+ L EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQDLVPNMDKQT+
Sbjct: 266 NYMDNFMQ-LPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTS 324
Query: 219 TADMLEEAVEYVKFLQKQIEVLHF-LENSPFGGSE 252
+DML+ AV+++K LQ Q++ L EN G SE
Sbjct: 325 YSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGCSE 359
>sp|Q9ZW81|BH129_ARATH Transcription factor bHLH129 OS=Arabidopsis thaliana GN=BHLH129
PE=2 SV=2
Length = 297
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 66/78 (84%), Gaps = 3/78 (3%)
Query: 165 MEKLL---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTAD 221
ME L+ EDSVPCR RAKRG ATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ AD
Sbjct: 218 MENLMNIPEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYAD 277
Query: 222 MLEEAVEYVKFLQKQIEV 239
ML+ AVE++K LQ Q+EV
Sbjct: 278 MLDLAVEHIKGLQHQVEV 295
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E +EYV+FLQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 236 QIEVL 240
Q++VL
Sbjct: 157 QVKVL 161
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
++RA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 136 TKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQ 194
Query: 235 KQIEVL 240
Q++VL
Sbjct: 195 LQVKVL 200
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+VRA+RG AT P SIAER+RR RI++R++ LQ+LVPN +K T+ A ML+E ++YVKFLQ
Sbjct: 129 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 187
Query: 236 QIEVL 240
Q++VL
Sbjct: 188 QVKVL 192
>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2
SV=1
Length = 335
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 52/74 (70%)
Query: 167 KLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEA 226
K LE + VRA+RG AT SIAERVRR +IS+R++ LQDLVP DK T A ML+E
Sbjct: 162 KELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEI 221
Query: 227 VEYVKFLQKQIEVL 240
+ YV+ LQ+QIE L
Sbjct: 222 INYVQSLQRQIEFL 235
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
SV=1
Length = 486
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT+ S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 301 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 360
Query: 235 KQIEVL 240
+Q+E L
Sbjct: 361 RQVEFL 366
>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137
PE=2 SV=1
Length = 286
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT S+AERVRR +IS+R+R LQ+LVP DK T A ML+E + YV+ LQ
Sbjct: 135 HVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQT 194
Query: 236 QIEVL 240
Q+E L
Sbjct: 195 QVEFL 199
>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2
SV=1
Length = 390
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 146 KVEQSGQVPGGVSNLVDMDMEKLLEDSVP---CRVRAKRGCATHPRSIAERVRRTRISDR 202
K ++ Q P SN + EK DS+ +RA+RG AT+ S+AERVRR +IS+R
Sbjct: 191 KKQKDEQSP--TSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISER 248
Query: 203 IRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVL 240
++ LQDLVP DK T A ML+E + YV+ LQ QIE L
Sbjct: 249 MKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFL 286
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
SV=1
Length = 456
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +IS+R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 256 IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 315
Query: 235 KQIEVL 240
+Q+E L
Sbjct: 316 RQVEFL 321
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
SV=1
Length = 366
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
+RA+RG AT+ S+AERVRR +IS+R+R LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 204 IHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQ 263
Query: 235 KQIEVL 240
+Q+E L
Sbjct: 264 QQVEFL 269
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ+LVPN K + + MLEEAV YVKFLQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 323
Query: 236 QIEVL 240
QI++L
Sbjct: 324 QIKLL 328
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I +R++ LQDLVP +K T A ML+E + YV+ LQ
Sbjct: 299 IHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ 358
Query: 235 KQIEVL 240
+Q+E L
Sbjct: 359 RQVEFL 364
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
+ RA RG AT P+S+ R RR RI++R+R LQ LVPN K + + MLEEAV+YVKFLQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VDISTMLEEAVQYVKFLQL 294
Query: 236 QIEVL 240
QI++L
Sbjct: 295 QIKLL 299
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 164 DMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADML 223
D EK SV + RA +G AT P+S+ R RR +I++R++ LQ+LVPN K + + ML
Sbjct: 154 DDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTML 212
Query: 224 EEAVEYVKFLQKQIEVL 240
EEAV YVKFLQ QI++L
Sbjct: 213 EEAVHYVKFLQLQIKLL 229
>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2
SV=1
Length = 371
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R+ LQDLVP ++ T A ML+E + YV+ LQ+Q
Sbjct: 191 VRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQ 250
Query: 237 IEVL 240
+E L
Sbjct: 251 VEFL 254
>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2
SV=1
Length = 304
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 96 DLFDGYFSNYATPSSYDYVDVSPNSNKRAREDNNTQFPSPTAKLNFHSHLKVEQSGQVP- 154
D DG S SS+ V N + RA N + P + +K E +
Sbjct: 62 DTTDGCISR---TSSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSM 118
Query: 155 GGVSNLVDMDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMD 214
G SN+ + + ++ VRA+RG AT S+AER RR +IS +++ LQD+VP +
Sbjct: 119 KGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCN 178
Query: 215 KQTNTADMLEEAVEYVKFLQKQIEVL 240
K T A ML+E + YV+ LQ+Q+E L
Sbjct: 179 KVTGKAGMLDEIINYVQSLQQQVEFL 204
>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2
SV=3
Length = 337
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AER RR +IS +++ LQD+VP +K T A ML+E + YV+ LQ
Sbjct: 183 IHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQ 242
Query: 235 KQIEVL 240
+Q+E L
Sbjct: 243 RQVEFL 248
>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2
SV=1
Length = 261
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRA+RG AT SIAERVRR +I++R++ LQD+VP K A ML+E + YV+ LQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 236 QIEVL 240
Q+E L
Sbjct: 206 QVEFL 210
>sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2
SV=1
Length = 260
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%)
Query: 175 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQ 234
VRA+RG AT S+AERVRR +I++R+R LQD+VP K A ML+E + YV+ LQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 235 KQIEVL 240
Q+E L
Sbjct: 203 NQVEFL 208
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S+ + +A RG A+ P+S+ R RR RI+DR++ LQ LVPN K + + MLE+AV YVK
Sbjct: 127 SLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLEDAVHYVK 185
Query: 232 FLQKQIEVL 240
FLQ QI++L
Sbjct: 186 FLQLQIKLL 194
>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
SV=1
Length = 223
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
VRAKRG AT S+AERVRR +I++R++ LQDLVP K A ML+ ++YV+ LQ
Sbjct: 103 HVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQN 162
Query: 236 QIEVL 240
QIE L
Sbjct: 163 QIEFL 167
>sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2
SV=1
Length = 327
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 171 DSVP-CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEY 229
D +P VRA+RG AT S+AER RR +I+ R++ LQ+LVP DK TA +L+E + +
Sbjct: 178 DKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINH 237
Query: 230 VKFLQKQIEVL 240
V+ LQ+Q+E+L
Sbjct: 238 VQTLQRQVEML 248
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
Length = 343
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K A +L+E + Y++ LQ+Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 237 IEVL 240
+E L
Sbjct: 196 VEFL 199
>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2
SV=1
Length = 281
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
VRA+RG AT S+AER RR +IS+++ LQD++P +K A +L+E + Y++ LQ+Q
Sbjct: 153 VRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQ 212
Query: 237 IEVLHFLENSPFGGSETG 254
+E L G+ TG
Sbjct: 213 VEFLSMKLEVVNSGASTG 230
>sp|O22768|UNE12_ARATH Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2
SV=2
Length = 310
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Query: 172 SVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVK 231
S+ RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP ++K T+ A M++E V+YVK
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 232 FLQKQIEVL 240
FL+ Q++VL
Sbjct: 200 FLRLQVKVL 208
>sp|Q93Y00|BH007_ARATH Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2
SV=1
Length = 302
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RVRA+RG AT P SIAER+RR RI++RIR LQ+LVP ++K T+ A M++E V+YVKFL+
Sbjct: 143 RVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRL 201
Query: 236 QIEVL 240
Q++VL
Sbjct: 202 QVKVL 206
>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
SV=1
Length = 298
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVLHFLENS 246
P+S+A + RR RIS+R++ LQ+LVPN K + MLE+A+ YVKFLQ Q++VL E
Sbjct: 205 PQSLAAKNRRERISERLKILQELVPNGTK-VDLVTMLEKAISYVKFLQVQVKVLATDEFW 263
Query: 247 PFGG 250
P G
Sbjct: 264 PAQG 267
>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
GN=BHLH86 PE=4 SV=2
Length = 307
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVL 240
P+S+A + RR RIS+R++ LQ+LVPN K + MLE+A+ YVKFLQ Q++VL
Sbjct: 211 PQSLAAKNRRERISERLKVLQELVPNGTK-VDLVTMLEKAIGYVKFLQVQVKVL 263
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 184 ATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEV 239
+T P+S+A R RR RISDR R L+ LVP K +T MLE+A+ YVKFL+ Q+ +
Sbjct: 41 STDPQSVAARERRHRISDRFRVLRSLVPGGSK-MDTVSMLEQAIHYVKFLKAQVTL 95
>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
PE=4 SV=1
Length = 912
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R R+ +T P+S+A R RR RISDR + LQ +VP K +T ML+EA+ YVKFL+
Sbjct: 36 RSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKM-DTVSMLDEAISYVKFLKA 94
Query: 236 QI 237
QI
Sbjct: 95 QI 96
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
+KR + +++ER RR RI++++R LQ+L+PN +K + A ML+EA+EY+K LQ Q++
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 397
Query: 239 VL 240
++
Sbjct: 398 IM 399
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 178 RAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
R +T P+++A R RR RIS++IR LQ LVP K +TA ML+EA Y+KFL+ Q+
Sbjct: 270 RKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQV 328
Query: 238 EVLHFL 243
+ L L
Sbjct: 329 KALENL 334
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 179 AKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
KR A +++ER RR RI++R++ LQ+L+P +K ++ A ML+EA+EY+K LQ QI+
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQ 338
Query: 239 VL 240
++
Sbjct: 339 MM 340
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
R KR +++E+ RR++I+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ
Sbjct: 86 RNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQL 144
Query: 236 QIEVLHFL 243
Q++ L +
Sbjct: 145 QVQTLAVM 152
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 45/60 (75%), Gaps = 3/60 (5%)
Query: 181 RGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVL 240
R H +++E+ RR+RI+++++ LQ L+PN +K T+ A ML+EA+EY+K LQ Q+++L
Sbjct: 197 RAAEVH--NLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQML 253
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 177 VRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
V KR A + +ER RR +I+ R++ LQ LVPN K T+ A ML+E +EY+K LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 237 IEVL 240
+ ++
Sbjct: 266 VSMM 269
>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3
Length = 198
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 187 PRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVL 240
P+++ R RR RIS++IR L+ +VP K +TA ML+EA+ Y KFL++Q+ +L
Sbjct: 122 PQTVVARRRRERISEKIRILKRIVPGGAK-MDTASMLDEAIRYTKFLKRQVRIL 174
>sp|Q9M0X8|BH114_ARATH Transcription factor bHLH114 OS=Arabidopsis thaliana GN=BHLH114
PE=2 SV=2
Length = 298
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 193 RVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVLHFLENSPFGG 250
+VR+ ++ DRI LQ LV K T+TA +L EAVEY+KFLQ+Q+ VL E + G
Sbjct: 173 KVRKEKLGDRITALQQLVSPFGK-TDTASVLNEAVEYIKFLQEQVTVLSNPEQNTIGS 229
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
KR A ++AER RR +I++R++ LQ L+P +K T + MLE+ +EYVK L+ QI
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVS-MLEDVIEYVKSLEMQI 203
>sp|Q9SFZ3|BH110_ARATH Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110
PE=2 SV=2
Length = 453
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 176 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQK 235
RV ++ C +VR+ ++ DRI LQ LV K T+TA +L EA+ Y+KFLQ
Sbjct: 321 RVESRSSCPPF------KVRKEKLGDRIAALQQLVSPFGK-TDTASVLMEAIGYIKFLQS 373
Query: 236 QIEVL 240
QIE L
Sbjct: 374 QIETL 378
>sp|Q9LT67|BH113_ARATH Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113
PE=2 SV=1
Length = 270
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 193 RVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIEVL---HFLENSPFG 249
+VR+ R+ +RI LQ LV K T+ A +L EA+ Y+KFLQ QI+VL + + +S G
Sbjct: 154 KVRKERLGERIAALQQLVSPYGK-TDAASVLHEAMGYIKFLQDQIQVLCSPYLINHSLDG 212
Query: 250 GSETG 254
G TG
Sbjct: 213 GVVTG 217
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 180 KRGCATHPRSIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
KR ++AER RR +I+++++ LQ L+P +K T + L++A+EYVK LQ QI+
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVS-TLDDAIEYVKSLQSQIQ 309
>sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis thaliana GN=BIM2 PE=1 SV=1
Length = 311
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 40/50 (80%)
Query: 189 SIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQIE 238
S+ E+ RR++I++R + L++L+PN +++ +TA L E ++YV++LQ++++
Sbjct: 51 SVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQ 100
>sp|Q9LEZ3|BIM1_ARATH Transcription factor BIM1 OS=Arabidopsis thaliana GN=BIM1 PE=1 SV=2
Length = 529
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 35/48 (72%)
Query: 189 SIAERVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQ 236
S E+ RR++I+DR + L+ L+PN D++ + A L E +EY++FLQ++
Sbjct: 282 SATEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEK 329
>sp|Q94JL3|BH112_ARATH Transcription factor bHLH112 OS=Arabidopsis thaliana GN=BHLH112
PE=2 SV=1
Length = 393
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 179 AKRGCATHPRSIAE-RVRRTRISDRIRKLQDLVPNMDKQTNTADMLEEAVEYVKFLQKQI 237
AK+ T P + +VR+ + D+I LQ LV K T+TA +L+EA+EY+KFL Q+
Sbjct: 265 AKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPFGK-TDTASVLQEAIEYIKFLHDQV 323
Query: 238 EVL 240
VL
Sbjct: 324 TVL 326
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.131 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,855,942
Number of Sequences: 539616
Number of extensions: 4493844
Number of successful extensions: 35856
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 146
Number of HSP's that attempted gapping in prelim test: 31530
Number of HSP's gapped (non-prelim): 3447
length of query: 257
length of database: 191,569,459
effective HSP length: 115
effective length of query: 142
effective length of database: 129,513,619
effective search space: 18390933898
effective search space used: 18390933898
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)